A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6888752



Internal ID10280905
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:3177954..3178211hg38UCSC Ensembl
Outerchr19:3177952..3178209hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg38258
hg19258
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717935, esv2717927, esv2717937, esv2717933
Supporting Variants
SamplesSSM096
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6888752
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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