A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6828645



Internal ID9882576
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrY:11532305..11537763hg38UCSC Ensembl
OuterchrY:13687981..13693439hg19UCSC Ensembl
CytobandYq11.21
Allele length
AssemblyAllele length
hg385459
hg195459
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2740649, esv2740648, esv2740645, esv2740647, esv2740644, esv2740646
Supporting Variants
SamplesSSM080
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6828645
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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