A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6820818



Internal ID10220343
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:3178122..3178199hg38UCSC Ensembl
Outerchr19:3178120..3178197hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg3878
hg1978
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717927, esv2717937, esv2717938, esv2717933
Supporting Variants
SamplesSSM078
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6820818
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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