A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6678791



Internal ID9745913
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrY:11692815..11739114hg38UCSC Ensembl
OuterchrY:13813521..13859820hg19UCSC Ensembl
CytobandYq11.21
Allele length
AssemblyAllele length
hg3846300
hg1946300
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2740666, esv2740660, esv2740656, esv2740658, esv2740654
Supporting Variants
SamplesSSM032
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6678791
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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