A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv489e201



Internal ID22759847
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr19:3177509..3178208hg38UCSC Ensembl
chr19:3177507..3178206hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg38700
hg19700
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2717931, esv2717926, esv2717928
SamplesSSM027, SSM087, SSM093, SSM050, SSM088, SSM021, SSM047, SSM018, SSM029, SSM026, SSM017, SSM031, SSM086, SSM081, SSM016, SSM010, SSM025, SSM049
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv489e201
Frequency
Sample Size96
Observed Gain0
Observed Loss18
Observed Complex0
Frequencyn/a


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