A curated catalogue of human genomic structural variation




Variant Details

Variant: dgv1332e201



Internal ID20126219
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrY:11680494..11681496hg38UCSC Ensembl
chrY:13801200..13802202hg19UCSC Ensembl
CytobandYq11.21
Allele length
AssemblyAllele length
hg381003
hg191003
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsesv2740655, esv2740659, esv2740663
SamplesSSM008, SSM027, SSM024, SSM084, SSM090, SSM018, SSM096, SSM017, SSM003, SSM067, SSM085, SSM082, SSM016, SSM037, SSM055
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)dgv1332e201
Frequency
Sample Size96
Observed Gain0
Observed Loss15
Observed Complex0
Frequencyn/a


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