variantaccession chr start end varianttype variantsubtype reference pubmedid method platform mergedvariants supportingvariants mergedorsample frequency samplesize observedgains observedlosses cohortdescription genes samples dgv1n82 1 1 11981 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv945697,nsv945698 M 97 10 0 DDX11L1,LOC100288778,MIR6859-1,MIR6859-2,WASH7P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7879 1 1 117193 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv14786,nssv14785,nssv14773,nssv14772,nssv14781,nssv14771,nssv14775,nssv14762,nssv14764,nssv18103,nssv14766,nssv14770,nssv14777,nssv14789,nssv14782,nssv14788,nssv18117,nssv14790,nssv14791,nssv14784,nssv14776,nssv14787,nssv21423,nssv14783,nssv14763,nssv14780,nssv14774,nssv14768,nssv18113,nssv18093 M 31 25 1 DDX11L1,FAM138A,FAM138F,LOC100288778,MIR6859-1,MIR6859-2,OR4F5,WASH7P NA07029,NA07048,NA10839,NA10863,NA12155,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv428112 1 377 167280 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450130 M 62 1 0 DDX11L1,FAM138A,FAM138F,LOC100288778,LOC729737,MIR6859-1,MIR6859-2,OR4F5,WASH7P HGDP01088 esv2758911 1 377 1008567 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757715,esv2756831 M 270 17 169 AGRN,C1orf159,C1orf170,DDX11L1,FAM138A,FAM138F,FAM41C,FAM87B,HES4,ISG15,KLHL17,LINC00115,LINC01128,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC100288778,LOC729737,MIR6723,MIR6859-1,MIR6859-2,NOC2L,OR4F16,OR4F29,OR4F3,OR4F5,PLEKHN1,RNF223,SAMD11,WASH7P NA06985,NA07000,NA07019,NA07034,NA07056,NA10835,NA10838,NA10846,NA10855,NA10857,NA10860,NA10863,NA11829,NA11830,NA11832,NA11840,NA11993,NA11994,NA11995,NA12004,NA12005,NA12044,NA12056,NA12057,NA12144,NA12155,NA12234,NA12239,NA12248,NA12249,NA12740,NA12752,NA12760,NA12762,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12864,NA12865,NA12873,NA12874,NA12875,NA12891,NA18500,NA18501,NA18502,NA18505,NA18506,NA18507,NA18508,NA18516,NA18521,NA18523,NA18524,NA18529,NA18532,NA18537,NA18540,NA18545,NA18547,NA18550,NA18555,NA18558,NA18561,NA18562,NA18563,NA18566,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18593,NA18603,NA18608,NA18609,NA18611,NA18620,NA18621,NA18622,NA18623,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18871,NA18912,NA18913,NA18914,NA18940,NA18944,NA18947,NA18949,NA18951,NA18952,NA18956,NA18959,NA18960,NA18961,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18974,NA18975,NA18976,NA18978,NA18981,NA18990,NA18991,NA18994,NA18995,NA18997,NA18998,NA19000,NA19007,NA19094,NA19098,NA19100,NA19101,NA19102,NA19103,NA19116,NA19119,NA19120,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19142,NA19143,NA19153,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19211,NA19221,NA19222,NA19223 esv27265 1 499 167231 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16041,esv19525,esv19430,esv20178,esv14423,esv15038,esv17542 M 40 32 6 DDX11L1,FAM138A,FAM138F,LOC100288778,LOC729737,MIR6859-1,MIR6859-2,OR4F5,WASH7P NA06985,NA07037,NA11894,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 dgv1e59 1 1052 26650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3343481,esv3364878 M 185 2 0 DDX11L1,FAM138A,FAM138F,LOC100288778,MIR6859-1,MIR6859-2,WASH7P NA12878,NA19239 nsv945700 1 11981 12586 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572127,nssv2570974,nssv2571018,nssv2570996,nssv2571007,nssv2570930,nssv2570963,nssv2572228,nssv2570941,nssv2571099,nssv2570985,nssv2570952 M 97 10 0 WASH7P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945699 1 11981 24883 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749258,nssv1749217,nssv1755475,nssv1749226,nssv1755466,nssv1749252,nssv1749206,nssv1749255,nssv1755471,nssv1749221,nssv1755469,nssv1749242,nssv1755476,nssv1749209,nssv1755461,nssv1749232,nssv1749257,nssv1749240,nssv1749261,nssv1749213,nssv1749202,nssv1749254,nssv1749265,nssv1749244,nssv1755464,nssv1749220,nssv1755480,nssv1749249,nssv1749214,nssv1749251,nssv1755468,nssv1749236,nssv1749262,nssv1749246,nssv1749210,nssv1749253,nssv1755474,nssv1749219,nssv1749266,nssv1749224,nssv1755478,nssv1749215,nssv1755473,nssv1749237,nssv1755472,nssv1749239,nssv1749264,nssv1749222,nssv1755467,nssv1749235,nssv1749211,nssv1749241,nssv1755477,nssv1749205,nssv1755465,nssv1749208,nssv1749260,nssv1749218,nssv1755463,nssv1749229,nssv1749263,nssv1749248,nssv1755462,nssv1749238,nssv1749204,nssv1749228,nssv1755479,nssv1749250,nssv1749203,nssv1749227,nssv1749259,nssv1749230,nssv1749233,nssv1749207,nssv1749216,nssv1755460,nssv1749225,nssv1749231,nssv1749247,nssv1749243 M 97 10 0 FAM138A,FAM138F,WASH7P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945484 1 13524 14682 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575222,nssv2575223,nssv2576583,nssv2575215,nssv2575214,nssv2576549,nssv2576580,nssv2576561,nssv2570921,nssv2576570,nssv2575209,nssv2576555,nssv2575211,nssv2576560,nssv2574190,nssv2576562,nssv2572827,nssv2575224,nssv2575210,nssv2576574,nssv2572831,nssv2575221,nssv2572962,nssv2576577,nssv2572826,nssv2576572,nssv2576582,nssv2576556,nssv2572821,nssv2576186,nssv2576581,nssv2576552,nssv2570923,nssv2575217,nssv2573987,nssv2575440,nssv2572824,nssv2576548,nssv2572828,nssv2575984,nssv2572829,nssv2576085,nssv2570922,nssv2576566,nssv2572830,nssv2575237,nssv2570920,nssv2576568,nssv2576584,nssv2576565,nssv2572861,nssv2572738,nssv2574088,nssv2576573,nssv2575208,nssv2576567,nssv2575220,nssv2575218,nssv2572822,nssv2576547,nssv2575212,nssv2575338,nssv2572823,nssv2576557,nssv2572820,nssv2576559,nssv2576585,nssv2576563,nssv2575188,nssv2576569,nssv2575219,nssv2576578,nssv2576550,nssv2576571,nssv2576551,nssv2576579,nssv2575213,nssv2576576,nssv2576558,nssv2576554 M 97 10 0 WASH7P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv469759 1 17843 167209 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1675941,nssv1672301,nssv1674201,nssv1673353,nssv1672137,nssv1673526,nssv1675248,nssv1673181,nssv1676076,nssv1674071,nssv1675044,nssv1675415,nssv1672641,nssv1676217 M 265 14 0 FAM138A,FAM138F,LOC729737,OR4F5,WASH7P nsv471591 1 17844 167209 CNV loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550437,nssv550438,nssv550436,nssv550435 M 48 0 4 FAM138A,FAM138F,LOC729737,OR4F5,WASH7P NA10492,NA10970,NA10971,NA17051 esv3433926 1 18852 25250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692083 M 185 1 0 FAM138A,FAM138F,WASH7P NA12892 nsv945486 1 20489 24883 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570932,nssv2570956,nssv2570933,nssv2570939,nssv2570935,nssv2570929,nssv2570927,nssv2570948,nssv2570958,nssv2570949,nssv2570926,nssv2570957,nssv2570959,nssv2570961,nssv2570955,nssv2570977,nssv2570971,nssv2570951,nssv2570969,nssv2570964,nssv2570953,nssv2570976,nssv2570970,nssv2570973,nssv2570940,nssv2570938,nssv2570950,nssv2570967,nssv2570975,nssv2570972,nssv2570944,nssv2570931,nssv2570947,nssv2570966,nssv2570934,nssv2570945,nssv2570968,nssv2570962,nssv2570936,nssv2570937,nssv2570942,nssv2570943,nssv2570960,nssv2570946,nssv2570954,nssv2570965,nssv2570928,nssv2570925 M 97 10 0 FAM138A,FAM138F HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945487 1 24883 30972 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570980,nssv2570979,nssv2570984,nssv2570981,nssv2570986,nssv2570987,nssv2570989,nssv2570978,nssv2570988,nssv2570982,nssv2570983 M 97 10 0 FAM138A,FAM138F HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3411655 1 27352 33450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692270 M 185 1 0 "" NA19238 esv3430433 1 28752 30550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692283 M 185 1 0 "" NA12878 esv3368735 1 34852 41350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692302 M 185 1 0 "" NA19238 dgv1n54 1 35394 110905 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544869,nsv544868,nsv544866 M 17421 0 3 OR4F5 esv3369077 1 35652 36850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692306 M 185 1 0 "" NA19239 esv3428396 1 35752 43850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692307 M 185 1 0 "" NA19240 esv3439865 1 37552 41350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692320 M 185 1 0 "" NA19239 nsv544867 1 39161 72017 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707616,nssv707617 M 17421 1 1 OR4F5 esv3335281 1 41952 44250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692333 M 185 1 0 "" NA19238 nsv437198 1 45257 76166 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467079 M 60 0 1 OR4F5 NA19208 nsv1003485 1 51586 346393 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469447,nssv3696558,nssv3476884,nssv3696569,nssv3463137,nssv3463892,nssv3696548,nssv3474744,nssv3471191,nssv3696544,nssv3696547,nssv3479706,nssv3696545,nssv3696546,nssv3470867,nssv3482016,nssv3696550,nssv3696557,nssv3472186,nssv3696553,nssv3696549,nssv3468415,nssv3463296,nssv3471949,nssv3696552,nssv3696551,nssv3696556,nssv3463288,nssv3465187,nssv3475098,nssv3696555,nssv3696554,nssv3696564,nssv3696559,nssv3696568,nssv3464043,nssv3696563,nssv3481510,nssv3477228,nssv3474145,nssv3696562,nssv3696561,nssv3473948,nssv3696560,nssv3480547,nssv3477702,nssv3479827,nssv3696567,nssv3696566,nssv3464195,nssv3482522,nssv3696565,nssv3473393,nssv3475970,nssv3470043,nssv3470584,nssv3475347,nssv3465963,nssv3481387,nssv3464394,nssv3479826,nssv3462938,nssv3475404,nssv3696543,nssv3696572,nssv3470363,nssv3696577,nssv3466202,nssv3467078,nssv3474319,nssv3471339,nssv3696590,nssv3465705,nssv3474000,nssv3474836,nssv3696571,nssv3476068,nssv3472604,nssv3468667,nssv3482040,nssv3472726,nssv3696570,nssv3696576,nssv3466437,nssv3474318,nssv3466203,nssv3471338,nssv3696573,nssv3464405,nssv3476550,nssv3478347,nssv3467996,nssv3466436,nssv3470564,nssv3475053,nssv3696575,nssv3468833,nssv3479224,nssv3467692,nssv3481242,nssv3473021,nssv3477538,nssv3474459,nssv3463689,nssv3696574,nssv3479800,nssv3696534,nssv3463623,nssv3467488,nssv3696589,nssv3696580,nssv3462798,nssv3469376,nssv3482136,nssv3464557,nssv3474916,nssv3696533,nssv3480039,nssv3463951,nssv3471715,nssv3696578,nssv3473908,nssv3696579,nssv3696532,nssv3696542,nssv3478808,nssv3696588,nssv3696538,nssv3696541,nssv3478162,nssv3696582,nssv3696535,nssv3696581,nssv3696537,nssv3463106,nssv3479033,nssv3696536,nssv3696583,nssv3696587,nssv3696540,nssv3696586,nssv3696539,nssv3465261,nssv3696585,nssv3467338,nssv3696584 M 29084 113 33 LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F5 nsv1012710 1 51586 554484 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470312,nssv3482539,nssv3696638,nssv3696594,nssv3479862,nssv3481305,nssv3476811,nssv3696646,nssv3479933,nssv3469759,nssv3696616,nssv3464929,nssv3696593,nssv3464580,nssv3696591,nssv3696592,nssv3472175,nssv3480975,nssv3696600,nssv3475711,nssv3479156,nssv3469378,nssv3476434,nssv3696640,nssv3696645,nssv3465002,nssv3478286,nssv3482697,nssv3464742,nssv3696599,nssv3696642,nssv3478168,nssv3696639,nssv3696596,nssv3464111,nssv3696641,nssv3472072,nssv3696595,nssv3480012,nssv3474426,nssv3479089,nssv3696598,nssv3696644,nssv3482095,nssv3696643,nssv3466983,nssv3480935,nssv3696597,nssv3475328,nssv3470532,nssv3464181,nssv3473146,nssv3696604,nssv3480770,nssv3479938,nssv3696601,nssv3469400,nssv3472928,nssv3480070,nssv3470929,nssv3481978,nssv3696609,nssv3478182,nssv3696615,nssv3696654,nssv3696602,nssv3696603,nssv3696647,nssv3696608,nssv3696649,nssv3696605,nssv3482163,nssv3463498,nssv3696648,nssv3462927,nssv3466186,nssv3467234,nssv3696653,nssv3696607,nssv3471503,nssv3479866,nssv3696650,nssv3696652,nssv3696606,nssv3696651,nssv3469240,nssv3471872,nssv3466549,nssv3477907,nssv3696610,nssv3696614,nssv3471124,nssv3477491,nssv3696611,nssv3481388,nssv3474026,nssv3467925,nssv3478180,nssv3696613,nssv3467978,nssv3467540,nssv3696612,nssv3468652,nssv3478377,nssv3481332,nssv3470813,nssv3476533,nssv3465769,nssv3482578,nssv3482530,nssv3696619,nssv3465440,nssv3469377,nssv3463871,nssv3696617,nssv3480638,nssv3696637,nssv3467567,nssv3478719,nssv3465835,nssv3696618,nssv3468901,nssv3462871,nssv3468407,nssv3475132,nssv3475815,nssv3476545,nssv3696627,nssv3479058,nssv3478367,nssv3480293,nssv3468104,nssv3469219,nssv3696621,nssv3463386,nssv3481058,nssv3696626,nssv3472744,nssv3469076,nssv3479370,nssv3471333,nssv3474690,nssv3481486,nssv3463615,nssv3696620,nssv3472080,nssv3471413,nssv3475063,nssv3696623,nssv3696625,nssv3463257,nssv3696622,nssv3481243,nssv3478626,nssv3466376,nssv3696624,nssv3475059,nssv3472950,nssv3696636,nssv3696631,nssv3696628,nssv3464988,nssv3477104,nssv3464840,nssv3478775,nssv3466663,nssv3479378,nssv3473340,nssv3472679,nssv3470437,nssv3466521,nssv3467209,nssv3462962,nssv3478152,nssv3478526,nssv3474321,nssv3696629,nssv3467406,nssv3696630,nssv3467571,nssv3475905,nssv3465361,nssv3464923,nssv3473500,nssv3476503,nssv3696635,nssv3473499,nssv3482073,nssv3465516,nssv3472758,nssv3696634,nssv3470683,nssv3481943,nssv3481550,nssv3465366,nssv3469834,nssv3473204,nssv3480704,nssv3696633,nssv3696632,nssv3473127,nssv3471939,nssv3468513 M 29084 203 0 LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5 dgv1n100 1 51586 615321 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013965,nsv1009288,nsv1001186 M 29084 203 139 LOC100132062,LOC100132287,LOC100133331,LOC729737,MIR6723,OR4F16,OR4F29,OR4F3,OR4F5 dgv2n100 1 51586 782343 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014330,nsv1004629,nsv1010257,nsv1009070,nsv998573 M 29084 41 6 FAM87B,LINC00115,LINC01128,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC729737,MIR6723,OR4F16,OR4F29,OR4F3,OR4F5 nsv999242 1 51586 813987 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479990 M 29084 0 1 FAM41C,FAM87B,LINC00115,LINC01128,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC729737,MIR6723,OR4F16,OR4F29,OR4F3,OR4F5 dgv3n100 1 51586 826936 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011222,nsv1000964,nsv998077,nsv1002712,nsv1002580,nsv1001532,nsv1011132,nsv1007952,nsv997879,nsv999289,nsv1013955,nsv999814,nsv1010556,nsv1009584,nsv1001549,nsv1011779,nsv999976,nsv1007490,nsv1012687 M 29084 59 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC729737,MIR6723,OR4F16,OR4F29,OR4F3,OR4F5 esv2764260 1 51598 225801 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004870,essv7004857,essv7004877,essv7004871,essv7004864,essv7004875,essv7004872,essv7004876,essv7004863,essv7004874,essv7004860,essv7004865,essv7004862,essv7004869,essv7004858,essv7004866,essv7004861,essv7004873,essv7004868,essv7004859 M 1109 8 12 LOC729737,OR4F5 RW_0064,RW_0071,RW_0077,RW_0137,RW_0148,RW_0155,RW_0161,RW_0166,RW_0184,RW_0229,RW_0233,RW_0289,RW_0328,RW_0502,RW_0528,RW_0564,RW_0608,RW_0611,RW_0620,RW_0652 esv2763187 1 51598 346405 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7024076,essv7028967,essv6999632,essv7001855,essv7030078,essv6990744,essv7001854,essv6995188,essv7002966,essv7006299,essv6991855,essv6998521,essv6997410,essv7032300,essv7000743,essv7005188,essv6990743,essv6990742,essv7031189,essv6992966,essv7004077,essv6996299,essv7027856,essv7012965,essv6994077 M 1109 17 8 LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F5 SW_0002,SW_0044,SW_0060,SW_0086,SW_0148,SW_0160,SW_0200,SW_0257,SW_0831,SW_0871,SW_0892,SW_1000,SW_1029,SW_1039,SW_1060,SW_1063,SW_1085,SW_1092,SW_1105,SW_1107,SW_1265,SW_1273,SW_1361,SW_1425,SW_1443 dgv2e59 1 53352 56150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3333057,esv3353898 M 185 2 0 "" NA19238,NA19240 nsv437859 1 55871 68941 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469962,nssv471090,nssv471423,nssv468851,nssv471201,nssv471312,nssv470979,nssv467740 M 269 0 8 OR4F5 NA10831,NA10857,NA12044,NA12155,NA18912,NA18914,NA19207,NA19208 dgv3e59 1 56652 58750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3366041,esv3341557,esv3441117 M 185 3 0 "" NA19238,NA19239,NA19240 nsv514929 1 58360 60490 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2866525,nssv2862715,nssv2864991,nssv2858700,nssv2867544,nssv2861378,nssv2862825,nssv2860772,nssv2866508,nssv2861190,nssv2860032,nssv2867224,nssv2861677,nssv2867596,nssv2864238,nssv2867651,nssv2859788,nssv2862492,nssv2864295,nssv2861048,nssv2860178,nssv2868367,nssv2866706,nssv2860024,nssv2866887,nssv2862199,nssv2861262,nssv2859388,nssv2868431,nssv2865937,nssv2861109,nssv2862335,nssv2867418,nssv2868486,nssv2859680,nssv2866178,nssv2864815,nssv2860984,nssv2868183,nssv2864968,nssv2861727,nssv2860971,nssv2859613,nssv2864820,nssv2864118,nssv2863165,nssv2865611,nssv2864331,nssv2865754,nssv2859496,nssv2867539,nssv2861479,nssv2864124,nssv2864949,nssv2865753,nssv2867664,nssv2864107,nssv2862192,nssv2861598,nssv2866198,nssv2861708,nssv2863379,nssv2866786,nssv2868005,nssv2862848,nssv2864999,nssv2863400,nssv2863591,nssv2863605,nssv2858788,nssv2862869,nssv2868108,nssv2860629,nssv2862365,nssv2859864,nssv2861660,nssv2863278,nssv2867226,nssv2861909,nssv2860788,nssv2866245,nssv2866559,nssv2859644,nssv2862935,nssv2861962,nssv2866377,nssv2868166,nssv2860077,nssv2866470,nssv2859105,nssv2859630,nssv2860722,nssv2863356,nssv2863454,nssv2863666,nssv2864621,nssv2867567,nssv2866371,nssv2865034,nssv2861368,nssv2859331,nssv2860242,nssv2866676,nssv2860212,nssv2859667,nssv2860399,nssv2863340,nssv2866214,nssv2859451,nssv2865749,nssv2862506,nssv2859919,nssv2864317,nssv2863719,nssv2865664,nssv2860563,nssv2864647,nssv2865098,nssv2863565,nssv2860673,nssv2863788,nssv2863563,nssv2865361,nssv2864540,nssv2860187,nssv2865011,nssv2862629,nssv2862138,nssv2859125,nssv2867808,nssv2860819,nssv2868137,nssv2860422,nssv2866448,nssv2859547,nssv2859426,nssv2861611,nssv2862349,nssv2859384,nssv2866282,nssv2864744,nssv2860682,nssv2860704,nssv2858735,nssv2863257,nssv2862647,nssv2867504,nssv2867841,nssv2859914,nssv2865484,nssv2861540,nssv2860935,nssv2858799,nssv2858896,nssv2864239,nssv2866593,nssv2867343,nssv2866257,nssv2863543,nssv2863101,nssv2860782,nssv2860627,nssv2862970,nssv2867901,nssv2864843,nssv2863524,nssv2858675,nssv2867873,nssv2863485,nssv2866062,nssv2859079,nssv2867650,nssv2862796,nssv2862774,nssv2866480,nssv2862824,nssv2859883,nssv2864859,nssv2864517,nssv2861958,nssv2859822,nssv2860715,nssv2864750,nssv2859022,nssv2864878,nssv2858528,nssv2858575,nssv2864356,nssv2858768,nssv2864900,nssv2862589,nssv2865279,nssv2867787,nssv2860789,nssv2859204,nssv2865860,nssv2866855,nssv2863568,nssv2858870,nssv2864418,nssv2860233,nssv2864340,nssv2862096,nssv2866045,nssv2858998,nssv2866234,nssv2864915,nssv2863085,nssv2859094,nssv2865293,nssv2860623,nssv2867410,nssv2866673,nssv2864514,nssv2860343,nssv2861308,nssv2868000,nssv2858559,nssv2867827,nssv2864218,nssv2863432,nssv2867549,nssv2858866,nssv2865409,nssv2863855,nssv2863237,nssv2865735,nssv2859842,nssv2864277,nssv2867208,nssv2862223,nssv2859048,nssv2859274,nssv2866655,nssv2866269,nssv2860690,nssv2862812,nssv2866294,nssv2868096,nssv2865160,nssv2861183,nssv2865417,nssv2862898,nssv2867535,nssv2866252,nssv2861515,nssv2865129,nssv2861561,nssv2860747,nssv2861101,nssv2862633,nssv2863993,nssv2859968,nssv2864825,nssv2867263,nssv2867616,nssv2864208,nssv2864020,nssv2861692,nssv2862601,nssv2864526,nssv2864672,nssv2858884,nssv2865841,nssv2863741,nssv2865669,nssv2862385,nssv2863214,nssv2863171,nssv2868351,nssv2867259,nssv2865521,nssv2862650,nssv2863149,nssv2860020,nssv2866940,nssv2865284,nssv2862930,nssv2861367,nssv2864246,nssv2858825,nssv2863089,nssv2867398,nssv2867485,nssv2866382,nssv2860942,nssv2859290,nssv2862788,nssv2868419,nssv2860838,nssv2862006,nssv2863534,nssv2861172,nssv2863065,nssv2866522,nssv2864712,nssv2860672,nssv2863617,nssv2862713,nssv2865369,nssv2859776,nssv2866359,nssv2865146,nssv2862538,nssv2862436,nssv2861250,nssv2865947,nssv2860210,nssv2868151,nssv2865815,nssv2867399,nssv2860687,nssv2863010,nssv2867142,nssv2867258,nssv2859489,nssv2866148,nssv2868077,nssv2860951,nssv2859063,nssv2867562,nssv2865588,nssv2862418,nssv2862299,nssv2859117,nssv2866507,nssv2862087,nssv2859693,nssv2867294,nssv2863944,nssv2860253,nssv2865147,nssv2859541,nssv2859934,nssv2867849,nssv2867078,nssv2867619,nssv2863102,nssv2866560,nssv2860335,nssv2861512,nssv2864864,nssv2859301,nssv2867969,nssv2858755,nssv2867615,nssv2860945,nssv2867068,nssv2867498,nssv2860681,nssv2868423,nssv2868296,nssv2867452,nssv2863363,nssv2867781,nssv2865957,nssv2863950,nssv2861581,nssv2867381,nssv2860526,nssv2867083,nssv2862159,nssv2864530,nssv2863069,nssv2860832,nssv2861396,nssv2864852,nssv2859861,nssv2866813,nssv2868265,nssv2864983,nssv2859332,nssv2867588,nssv2859540,nssv2859712,nssv2861485,nssv2867088,nssv2863842,nssv2865964,nssv2860365,nssv2862690,nssv2858883,nssv2868454,nssv2860038,nssv2861391,nssv2861154,nssv2860414,nssv2862733,nssv2866610,nssv2858633,nssv2865040,nssv2860153,nssv2864123,nssv2866378,nssv2863732,nssv2858572,nssv2866438,nssv2865628,nssv2862080,nssv2860825,nssv2867603,nssv2861240,nssv2858941,nssv2862036,nssv2860595,nssv2862317,nssv2862501,nssv2863459,nssv2864040,nssv2865874,nssv2861553,nssv2858702,nssv2867670,nssv2865003,nssv2861618,nssv2867361,nssv2867174,nssv2859104,nssv2866290,nssv2866307,nssv2859135,nssv2866514,nssv2859927,nssv2864910,nssv2863552,nssv2865827,nssv2865228,nssv2867938,nssv2865468,nssv2860254,nssv2859869,nssv2865928,nssv2867462,nssv2862291,nssv2864873,nssv2863393,nssv2861924,nssv2862868,nssv2863164,nssv2862079,nssv2860333,nssv2868413,nssv2859300,nssv2863709,nssv2861997,nssv2863475,nssv2864702,nssv2864501,nssv2859913,nssv2858644,nssv2858615,nssv2866018,nssv2863896,nssv2865665,nssv2865513,nssv2865029,nssv2862780,nssv2866710,nssv2867920,nssv2866078,nssv2867728,nssv2865483,nssv2866623,nssv2860124,nssv2859448,nssv2865416,nssv2860873,nssv2862350,nssv2866509,nssv2860437,nssv2868209,nssv2862362,nssv2864784,nssv2867583,nssv2865555,nssv2860286,nssv2861327,nssv2864902,nssv2864223,nssv2867681,nssv2866778,nssv2860377,nssv2865643,nssv2858540,nssv2866100,nssv2859964,nssv2865168,nssv2863060 M 2366 488 0 OR4F5 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv544870 1 63065 127315 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707620 M 17421 0 1 LOC729737 nsv945701 1 67745 77947 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750673,nssv1749372,nssv1749275,nssv1749383,nssv1749274,nssv1750429,nssv1749299,nssv1750440,nssv1749284,nssv1749295,nssv1749269,nssv1750551,nssv1749282,nssv1749305,nssv1749271,nssv1749450,nssv1749294,nssv1750496,nssv1749272,nssv1750451,nssv1750662,nssv1749361,nssv1749273,nssv1749438,nssv1749280,nssv1749297,nssv1749290,nssv1750540,nssv1749283,nssv1749296,nssv1749288,nssv1750518,nssv1749285,nssv1749308,nssv1750618,nssv1749405,nssv1749302,nssv1749394,nssv1750640,nssv1749472,nssv1749276,nssv1749268,nssv1749291,nssv1749483,nssv1749292,nssv1749427,nssv1749277,nssv1749315,nssv1750695,nssv1749350,nssv1749287,nssv1749303,nssv1749298,nssv1750462,nssv1750629,nssv1750485,nssv1749286,nssv1749307,nssv1750684,nssv1749293,nssv1750607,nssv1750584,nssv1749270,nssv1750507,nssv1750596,nssv1749416,nssv1750651,nssv1750418,nssv1749281,nssv1750562,nssv1749279,nssv1749339,nssv1749306,nssv1750529,nssv1749461,nssv1750573,nssv1749301,nssv1749326,nssv1750473,nssv1749304 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945702 1 77947 81180 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751697,nssv1751763,nssv1751730,nssv1751739,nssv1751653,nssv1751751,nssv1751708,nssv1751746,nssv1751741,nssv1751767,nssv1751757,nssv1751771,nssv1751755,nssv1751748,nssv1751761,nssv1751675,nssv1751760,nssv1751750,nssv1751737,nssv1751742,nssv1751766,nssv1751756,nssv1751734,nssv1751764,nssv1751770,nssv1751773,nssv1751686,nssv1751744,nssv1751735,nssv1751740,nssv1751749,nssv1751747,nssv1751719,nssv1751759,nssv1751762,nssv1751736,nssv1750707,nssv1751753,nssv1751752,nssv1751738,nssv1751745,nssv1751758,nssv1751769,nssv1750718,nssv1751768,nssv1751733,nssv1751772,nssv1751664 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv161172 1 78053 79016 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179750 M 24 "" nsv945705 1 81180 83468 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571009,nssv2568839,nssv2571013,nssv2570999,nssv2571000,nssv2571010,nssv2571001,nssv2571012,nssv2571016,nssv2568844,nssv2571014,nssv2571076,nssv2570995,nssv2568834,nssv2571003,nssv2570997,nssv2568832,nssv2568842,nssv2571032,nssv2568837,nssv2568033,nssv2568846,nssv2571043,nssv2571020,nssv2570993,nssv2568030,nssv2571008,nssv2571100,nssv2571005,nssv2571087,nssv2568843,nssv2571021,nssv2568031,nssv2568840,nssv2568035,nssv2568034,nssv2568830,nssv2571022,nssv2568032,nssv2571019,nssv2570998,nssv2568831,nssv2571004,nssv2568845,nssv2568036,nssv2571011,nssv2571017,nssv2571006,nssv2571002,nssv2571111,nssv2571065,nssv2568835,nssv2568836,nssv2571122,nssv2568833,nssv2568841,nssv2570994,nssv2571015,nssv2571054,nssv2568838 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945704 1 81180 115263 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751782,nssv1751846,nssv1751795,nssv1751816,nssv1751860,nssv1751837,nssv1751785,nssv1751847,nssv1751792,nssv1751831,nssv1751779,nssv1751830,nssv1751856,nssv1751805,nssv1751800,nssv1751850,nssv1751806,nssv1751841,nssv1751777,nssv1751836,nssv1751796,nssv1751851,nssv1751780,nssv1751822,nssv1751809,nssv1751817,nssv1751859,nssv1751811,nssv1751858,nssv1751845,nssv1751802,nssv1751849,nssv1751852,nssv1751774,nssv1751798,nssv1751803,nssv1751784,nssv1751839,nssv1751857,nssv1751826,nssv1751778,nssv1751833,nssv1751793,nssv1751824,nssv1751853,nssv1751829,nssv1751786,nssv1751814,nssv1751855,nssv1751838,nssv1751861,nssv1751820,nssv1751783,nssv1751842,nssv1751862,nssv1751834,nssv1751807,nssv1751812,nssv1751791,nssv1751825,nssv1751775,nssv1751835,nssv1751794,nssv1751815,nssv1751789,nssv1751801,nssv1751790,nssv1751848,nssv1751781,nssv1751827,nssv1751797,nssv1751823,nssv1751813,nssv1751804,nssv1751840,nssv1751818,nssv1751819,nssv1751808,nssv1751828,nssv1751844 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv4e59 1 81452 88250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3379005,esv3411984 M 185 2 0 "" NA19239,NA19240 nsv945494 1 83468 85300 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2568857,nssv2569109,nssv2568854,nssv2568847,nssv2568850,nssv2568900,nssv2568855,nssv2568889,nssv2569032,nssv2568852,nssv2569131,nssv2569087,nssv2569021,nssv2568864,nssv2568859,nssv2568860,nssv2569098,nssv2568878,nssv2568933,nssv2568861,nssv2568944,nssv2568851,nssv2568922,nssv2568856,nssv2568858,nssv2569010,nssv2569076,nssv2568868,nssv2568853,nssv2568988,nssv2568849,nssv2568848,nssv2568999,nssv2568966,nssv2570000,nssv2568955,nssv2569120,nssv2568977,nssv2568865,nssv2569065,nssv2568862,nssv2568863,nssv2569043,nssv2568911,nssv2569054,nssv2568866,nssv2569978,nssv2568867,nssv2569989 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3436859 1 83752 86350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692418 M 185 1 0 "" NA19238 nsv945495 1 85300 86515 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570099,nssv2571171,nssv2570044,nssv2570077,nssv2570088,nssv2571176,nssv2570154,nssv2571177,nssv2571178,nssv2570220,nssv2570132,nssv2570209,nssv2571179,nssv2570264,nssv2570242,nssv2570011,nssv2571169,nssv2570198,nssv2570110,nssv2570055,nssv2570033,nssv2571190,nssv2571183,nssv2570187,nssv2571181,nssv2571189,nssv2571185,nssv2571188,nssv2571170,nssv2571168,nssv2571180,nssv2571173,nssv2571160,nssv2570231,nssv2570253,nssv2571174,nssv2570066,nssv2571182,nssv2570275,nssv2571175,nssv2570022,nssv2570165,nssv2571184,nssv2570176,nssv2570143,nssv2571172,nssv2571187,nssv2570121,nssv2571186 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945496 1 86515 88612 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571201,nssv2571209,nssv2571194,nssv2571206,nssv2571198,nssv2571227,nssv2571199,nssv2571215,nssv2571220,nssv2571208,nssv2571196,nssv2571207,nssv2571203,nssv2571212,nssv2571213,nssv2571210,nssv2571233,nssv2571222,nssv2571226,nssv2571219,nssv2571223,nssv2571239,nssv2571214,nssv2571221,nssv2571236,nssv2571200,nssv2571192,nssv2571234,nssv2571202,nssv2571191,nssv2571211,nssv2571225,nssv2571235,nssv2571224,nssv2571228,nssv2571205,nssv2571238,nssv2571197,nssv2571231,nssv2571229,nssv2571193,nssv2571195,nssv2571232,nssv2571230,nssv2571216,nssv2571237,nssv2571218,nssv2571217,nssv2571204 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945498 1 88612 95221 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571250,nssv2571272,nssv2571243,nssv2571262,nssv2571247,nssv2571253,nssv2571248,nssv2571256,nssv2571287,nssv2571251,nssv2571263,nssv2571261,nssv2571276,nssv2571260,nssv2571270,nssv2571288,nssv2571283,nssv2571282,nssv2571266,nssv2571285,nssv2571279,nssv2571281,nssv2571286,nssv2571271,nssv2571280,nssv2571277,nssv2571284,nssv2571252,nssv2571259,nssv2571274,nssv2571275,nssv2571249,nssv2571273,nssv2571246,nssv2571264,nssv2571269,nssv2571244,nssv2571267,nssv2571255,nssv2571278,nssv2571257,nssv2571268,nssv2571241,nssv2571245,nssv2571265,nssv2571258,nssv2571242,nssv2571254 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3431809 1 89552 90750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692423 M 185 1 0 "" NA19240 dgv5e59 1 92952 95650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3329998,esv3336840 M 185 2 0 "" NA19239,NA19240 nsv945500 1 95221 110120 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571299,nssv2571301,nssv2571297,nssv2571304,nssv2571292,nssv2571331,nssv2571296,nssv2571330,nssv2571333,nssv2571293,nssv2571332,nssv2571321,nssv2571372,nssv2571325,nssv2571319,nssv2571314,nssv2571295,nssv2571323,nssv2571305,nssv2571350,nssv2571311,nssv2571317,nssv2571309,nssv2571327,nssv2571324,nssv2571310,nssv2571306,nssv2571361,nssv2571339,nssv2571329,nssv2571328,nssv2571313,nssv2571303,nssv2571300,nssv2571322,nssv2571315,nssv2571308,nssv2571318,nssv2571298,nssv2571316,nssv2571307,nssv2571290,nssv2571326,nssv2571294,nssv2571320,nssv2571302,nssv2571291,nssv2571312 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv6e59 1 96652 99050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3349278,esv3427619 M 185 2 0 "" NA19238,NA19239 esv3441565 1 96652 101150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692436 M 185 1 0 "" NA19240 esv3335040 1 99752 101050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692439 M 185 1 0 "" NA19239 nsv945503 1 110120 114388 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572417,nssv2573704,nssv2571460,nssv2573671,nssv2572395,nssv2573770,nssv2571416,nssv2572461,nssv2572615,nssv2572516,nssv2573638,nssv2573693,nssv2572450,nssv2571427,nssv2572670,nssv2572582,nssv2572681,nssv2573715,nssv2572593,nssv2572406,nssv2573627,nssv2573737,nssv2571438,nssv2573660,nssv2571449,nssv2572494,nssv2572505,nssv2572571,nssv2571394,nssv2572472,nssv2573726,nssv2572659,nssv2572692,nssv2572439,nssv2572483,nssv2572648,nssv2572549,nssv2573759,nssv2573649,nssv2572428,nssv2571405,nssv2572527,nssv2572560,nssv2572538,nssv2573682,nssv2572604,nssv2573748,nssv2572637,nssv2572626 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv2n54 1 110905 127537 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544871,nsv544872 M 17421 0 2 LOC729737 nsv544873 1 110905 160593 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707623 M 17421 1 0 LOC729737 nsv945707 1 115263 119106 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573796,nssv2573814,nssv2573788,nssv2573845,nssv2573853,nssv2573844,nssv2573802,nssv2573817,nssv2573803,nssv2573838,nssv2573797,nssv2573828,nssv2573856,nssv2573830,nssv2573807,nssv2573827,nssv2573857,nssv2573826,nssv2573798,nssv2573808,nssv2573795,nssv2573809,nssv2573789,nssv2573847,nssv2573801,nssv2573834,nssv2573794,nssv2573835,nssv2573861,nssv2573822,nssv2573787,nssv2573849,nssv2573804,nssv2573850,nssv2573858,nssv2573840,nssv2573859,nssv2573839,nssv2573860,nssv2573863,nssv2573862,nssv2573851,nssv2573792,nssv2573832,nssv2573784,nssv2573846,nssv2573785,nssv2573831,nssv2573786,nssv2573848,nssv2573790,nssv2573819,nssv2573854,nssv2573824,nssv2573805,nssv2573821,nssv2573811,nssv2573781,nssv2573855,nssv2573818,nssv2573800,nssv2573841,nssv2573799,nssv2573806,nssv2573812,nssv2573837,nssv2573791,nssv2573816,nssv2573793,nssv2573825,nssv2573813,nssv2573836,nssv2573842,nssv2573843,nssv2573823,nssv2573815,nssv2573829,nssv2573852,nssv2573820,nssv2573810,nssv2573833 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945706 1 115263 166847 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751877,nssv1751575,nssv1751879,nssv1751531,nssv1751871,nssv1751498,nssv1751895,nssv1751929,nssv1751510,nssv1751520,nssv1751880,nssv1752909,nssv1751875,nssv1751896,nssv1751870,nssv1751482,nssv1751511,nssv1751951,nssv1751868,nssv1752953,nssv1751506,nssv1751502,nssv1751508,nssv1751513,nssv1751503,nssv1751490,nssv1751504,nssv1751480,nssv1751509,nssv1751497,nssv1751885,nssv1751542,nssv1751888,nssv1751476,nssv1751894,nssv1751478,nssv1751890,nssv1751907,nssv1751869,nssv1751486,nssv1751507,nssv1751499,nssv1751884,nssv1751495,nssv1751867,nssv1751893,nssv1751864,nssv1751485,nssv1751878,nssv1751481,nssv1751866,nssv1751491,nssv1751881,nssv1751918,nssv1751873,nssv1751586,nssv1751886,nssv1751902,nssv1751512,nssv1751477,nssv1751897,nssv1751940,nssv1751872,nssv1752942,nssv1751883,nssv1751597,nssv1751882,nssv1751494,nssv1751505,nssv1751900,nssv1751874,nssv1751891,nssv1751892,nssv1751500,nssv1751564,nssv1751863,nssv1751483,nssv1751903,nssv1751487,nssv1751488,nssv1751492,nssv1751496,nssv1751479,nssv1752898,nssv1752964,nssv1752920,nssv1751484,nssv1752931,nssv1751501,nssv1751493,nssv1751514,nssv1751489,nssv1751904,nssv1751901,nssv1752887,nssv1751553,nssv1751889 M 97 10 0 LOC729737 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945504 1 119106 123365 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573883,nssv2573921,nssv2574865,nssv2574853,nssv2574859,nssv2573896,nssv2574861,nssv2573912,nssv2574866,nssv2573911,nssv2573876,nssv2573910,nssv2573873,nssv2574854,nssv2573884,nssv2573915,nssv2573888,nssv2573900,nssv2573880,nssv2574852,nssv2573866,nssv2573889,nssv2573893,nssv2573890,nssv2573878,nssv2574856,nssv2573874,nssv2573922,nssv2574858,nssv2573901,nssv2573882,nssv2573918,nssv2573871,nssv2573906,nssv2573892,nssv2573895,nssv2573877,nssv2573908,nssv2574864,nssv2573899,nssv2573868,nssv2573887,nssv2574860,nssv2573920,nssv2573879,nssv2573925,nssv2573867,nssv2573927,nssv2573865,nssv2573919,nssv2574863,nssv2573897,nssv2573870,nssv2573894,nssv2574862,nssv2573864,nssv2573886,nssv2573909,nssv2573875,nssv2573898,nssv2573885,nssv2573926,nssv2573881,nssv2573902,nssv2573869,nssv2574857,nssv2573872,nssv2573914,nssv2574867,nssv2573923,nssv2573905,nssv2574855,nssv2573904,nssv2573913,nssv2573916,nssv2573903,nssv2573907,nssv2573917,nssv2573891,nssv2573924 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv991724 1 126044 127189 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586083 M 3 0 1 LOC729737 HuRef esv3357639 1 126152 127350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691773 M 185 1 0 LOC729737 NA19240 nsv8990 1 166125 167223 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv14779 M 31 0 1 "" NA18572 nsv945708 1 217161 225854 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753665,nssv1753631,nssv1753658,nssv1753629,nssv1752543,nssv1753623,nssv2575116,nssv1753577,nssv1752356,nssv1753632,nssv1752301,nssv1753640,nssv1752455,nssv1753654,nssv2575119,nssv2575120,nssv2575112,nssv1753522,nssv1753661,nssv1752477,nssv1753663,nssv1753626,nssv1753664,nssv1753655,nssv1753662,nssv1753653,nssv1752444,nssv1753635,nssv1751619,nssv1753566,nssv1752565,nssv1753634,nssv1752334,nssv1753675,nssv1752290,nssv1752554,nssv1752378,nssv1753671,nssv1753659,nssv2575111,nssv1752433,nssv1753636,nssv1752389,nssv1753630,nssv1752279,nssv1753669,nssv1752466,nssv1753624,nssv1752268,nssv1753652,nssv1752367,nssv1753621,nssv1752488,nssv1753500,nssv1752400,nssv1753668,nssv1753656,nssv1753673,nssv1752323,nssv1753533,nssv1751630,nssv1752499,nssv1753660,nssv2575115,nssv1752312,nssv1753637,nssv2575117,nssv1753642,nssv1752345,nssv1753646,nssv1751641,nssv1753651,nssv1753657,nssv1753511,nssv1752422,nssv1753628,nssv1752411,nssv1753641,nssv1752532,nssv1753544,nssv1753588,nssv2575113,nssv1752510,nssv1753625,nssv1753647,nssv1752521,nssv1753627,nssv1753633,nssv1751608,nssv1753648,nssv1753670,nssv1753643,nssv2575110,nssv1753674,nssv2575114,nssv1753639,nssv1753650,nssv1753672,nssv1753649,nssv1753644,nssv1753610,nssv1753555,nssv1753645,nssv1753638,nssv1753599,nssv2575118,nssv1753667,nssv1753666 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv4n100 1 218557 878522 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000603,nsv1010877,nsv1005920,nsv998987,nsv1000176,nsv998917 M 29084 8 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,MIR6723,NOC2L,OR4F16,OR4F29,OR4F3,SAMD11 dgv7e59 1 219752 228650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3413313,esv3431827,esv3432331 M 185 3 0 "" NA12878,NA19239,NA19240 esv3337205 1 220952 225550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692128 M 185 1 0 "" NA12892 nsv945509 1 225854 229279 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575131,nssv2574759,nssv2575124,nssv2574787,nssv2575129,nssv2575122,nssv2575128,nssv2574766,nssv2574784,nssv2574762,nssv2574769,nssv2574764,nssv2574789,nssv2574785,nssv2574772,nssv2574793,nssv2575132,nssv2574771,nssv2575130,nssv2574765,nssv2574773,nssv2574770,nssv2575125,nssv2574786,nssv2575123,nssv2574788,nssv2575127,nssv2574768,nssv2574779,nssv2574776,nssv2575126,nssv2574794,nssv2574760,nssv2574767,nssv2574763,nssv2574782,nssv2574775,nssv2574761,nssv2574774,nssv2574783,nssv2574790,nssv2574777,nssv2574791,nssv2574780,nssv2574781,nssv2574792,nssv2574758,nssv2574778 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945710 1 229279 231420 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574804,nssv2574795,nssv2574802,nssv2574796,nssv2574797,nssv2574799,nssv2574801,nssv2574803,nssv2574805,nssv2574800,nssv2574798 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945709 1 229279 257704 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754577,nssv1753716,nssv1754632,nssv1753796,nssv1753677,nssv1754445,nssv1753688,nssv1754423,nssv1754621,nssv1753721,nssv1753696,nssv1754478,nssv1753694,nssv1753676,nssv1753697,nssv1753752,nssv1753698,nssv1753702,nssv1753690,nssv1754456,nssv1754588,nssv1754522,nssv1753693,nssv1754500,nssv1754665,nssv1754511,nssv1754610,nssv1753774,nssv1753691,nssv1753712,nssv1754643,nssv1753724,nssv1753678,nssv1753713,nssv1753680,nssv1753718,nssv1753705,nssv1753717,nssv1753707,nssv1753723,nssv1753689,nssv1753720,nssv1753685,nssv1754467,nssv1754566,nssv1753706,nssv1753682,nssv1754489,nssv1753695,nssv1753730,nssv1754599,nssv1753722,nssv1753686,nssv1753699,nssv1753683,nssv1753710,nssv1753681,nssv1754533,nssv1754654,nssv1754434,nssv1753684,nssv1753785,nssv1753692,nssv1753763,nssv1753704,nssv1753741,nssv1753700,nssv1753714,nssv1753679,nssv1754544,nssv1753687,nssv1754555,nssv1753709,nssv1753701,nssv1753719,nssv1753711,nssv1753703,nssv1753708,nssv1753715,nssv1753725 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3424705 1 231152 233450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692166 M 185 1 0 "" NA19240 nsv945510 1 231420 233762 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574814,nssv2574824,nssv2574816,nssv2575751,nssv2574813,nssv2575749,nssv2574809,nssv2574840,nssv2574839,nssv2574815,nssv2574836,nssv2574850,nssv2574828,nssv2574811,nssv2574825,nssv2574851,nssv2574835,nssv2574822,nssv2574838,nssv2574829,nssv2574834,nssv2574830,nssv2574818,nssv2574821,nssv2574826,nssv2574808,nssv2574841,nssv2574849,nssv2574844,nssv2574831,nssv2574807,nssv2574846,nssv2574848,nssv2575750,nssv2574827,nssv2574845,nssv2574843,nssv2574819,nssv2574810,nssv2574837,nssv2574842,nssv2574847,nssv2574832,nssv2574812,nssv2574833,nssv2574823,nssv2574820,nssv2574817 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945513 1 233762 234596 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575762,nssv2575797,nssv2575759,nssv2575798,nssv2575760,nssv2575790,nssv2575755,nssv2575778,nssv2575793,nssv2575791,nssv2575779,nssv2575777,nssv2575763,nssv2575782,nssv2575784,nssv2575799,nssv2575773,nssv2575761,nssv2575796,nssv2575787,nssv2575772,nssv2575767,nssv2575801,nssv2575795,nssv2575774,nssv2575776,nssv2575785,nssv2575775,nssv2575764,nssv2575800,nssv2575781,nssv2575758,nssv2575771,nssv2575792,nssv2575780,nssv2575770,nssv2575789,nssv2575754,nssv2575786,nssv2575788,nssv2575766,nssv2575768,nssv2575783,nssv2575753,nssv2575765,nssv2575756,nssv2575794,nssv2575769,nssv2575757 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945514 1 234596 235648 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575808,nssv2575843,nssv2575811,nssv2575834,nssv2575809,nssv2575845,nssv2575804,nssv2575818,nssv2575838,nssv2575840,nssv2575813,nssv2575825,nssv2575810,nssv2575837,nssv2575827,nssv2575823,nssv2575828,nssv2575821,nssv2575822,nssv2575836,nssv2575826,nssv2575802,nssv2575844,nssv2575847,nssv2575833,nssv2575807,nssv2575815,nssv2575806,nssv2575819,nssv2575846,nssv2575831,nssv2575848,nssv2575839,nssv2575835,nssv2575803,nssv2575817,nssv2575841,nssv2575814,nssv2575812,nssv2575832,nssv2575842,nssv2575849,nssv2575824,nssv2575816,nssv2575829,nssv2575805,nssv2575820,nssv2575830 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3352725 1 234852 237050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692188 M 185 1 0 "" NA19239 esv3390070 1 235552 237150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692193 M 185 1 0 "" NA19240 nsv945516 1 235648 247933 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575860,nssv2575881,nssv2575858,nssv2568298,nssv2575857,nssv2568301,nssv2575853,nssv2575869,nssv2575852,nssv2575868,nssv2575861,nssv2575867,nssv2569140,nssv2575866,nssv2575856,nssv2575855,nssv2568294,nssv2568292,nssv2569139,nssv2575875,nssv2575882,nssv2575876,nssv2575864,nssv2568295,nssv2575851,nssv2575874,nssv2575870,nssv2568296,nssv2575879,nssv2575865,nssv2569138,nssv2575871,nssv2575854,nssv2575878,nssv2568300,nssv2575862,nssv2575880,nssv2568293,nssv2575877,nssv2575883,nssv2569141,nssv2568291,nssv2568297,nssv2575872,nssv2568299,nssv2575873,nssv2575859,nssv2575863 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3416780 1 239352 241450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692195 M 185 1 0 "" NA19239 esv3413391 1 239352 244050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692196 M 185 1 0 "" NA19240 esv3347825 1 240152 241450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692199 M 185 1 0 "" NA19238 esv3381085 1 241952 245250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692200 M 185 1 0 "" NA19239 esv3405973 1 242052 243950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692201 M 185 1 0 "" NA19238 nsv945517 1 247933 257704 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569152,nssv2569160,nssv2569149,nssv2569189,nssv2569150,nssv2569174,nssv2569145,nssv2569184,nssv2569143,nssv2569168,nssv2569146,nssv2569163,nssv2569171,nssv2569148,nssv2569157,nssv2569165,nssv2569144,nssv2569175,nssv2569170,nssv2569153,nssv2569179,nssv2569154,nssv2569166,nssv2569173,nssv2569176,nssv2569155,nssv2569177,nssv2569167,nssv2569164,nssv2569187,nssv2569180,nssv2569156,nssv2569186,nssv2569178,nssv2569169,nssv2569182,nssv2569172,nssv2569185,nssv2569147,nssv2569161,nssv2569142,nssv2569181,nssv2569158,nssv2569159,nssv2569190,nssv2569188,nssv2569183,nssv2569162,nssv2569151 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945712 1 307204 327563 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755891,nssv1756011,nssv1754698,nssv1756005,nssv1755983,nssv1756026,nssv1755974,nssv1756007,nssv1755869,nssv1756013,nssv1756033,nssv1756004,nssv1755981,nssv1755987,nssv1756035,nssv1756047,nssv1754687,nssv1756002,nssv1755902,nssv1756023,nssv1755980,nssv1755994,nssv1756037,nssv1755997,nssv1756030,nssv1756020,nssv1756034,nssv1755982,nssv1755976,nssv1756025,nssv1755825,nssv1756045,nssv1755847,nssv1756028,nssv1756036,nssv1755985,nssv1755946,nssv1755979,nssv1755913,nssv1756024,nssv1755968,nssv1756021,nssv1755858,nssv1756044,nssv1756029,nssv1755989,nssv1754709,nssv1756039,nssv1755814,nssv1755996,nssv1755924,nssv1756015,nssv1756031,nssv1756042,nssv1755957,nssv1756040,nssv1755792,nssv1755975,nssv1756032,nssv1756018,nssv1756038,nssv1755988,nssv1755803,nssv1755978,nssv1755935,nssv1756006,nssv1755880,nssv1754676,nssv1755836,nssv1756009,nssv1754720,nssv1756001,nssv1755998,nssv1756022,nssv1756027,nssv1756008,nssv1756041,nssv1755995,nssv1756012,nssv1756046,nssv1756010,nssv1755984,nssv1756043,nssv1756017,nssv1756019,nssv1756048,nssv1755999,nssv1756003,nssv1756000,nssv1755986,nssv1755992,nssv1756016,nssv1755990,nssv1755991,nssv1755993,nssv1756014,nssv1755977 M 97 10 0 LOC100132062,LOC100132287,LOC100133331 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv428223 1 307583 461231 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450575,nssv450686 M 62 1 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 HGDP00984,NA18498 esv27883 1 307633 461200 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13367,esv9873,esv15703,esv17876,esv13800,esv10639,esv15785,esv20387,esv20401,esv16611,esv14573 M 40 13 17 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA11894,NA11993,NA12006,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18511,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19108,NA19114,NA19190,NA19225 nsv829647 1 307737 415038 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441517,nssv1441518,nssv1442628,nssv1448183,nssv1447072,nssv1444850,nssv1450405,nssv1441629,nssv1443739,nssv1449294,nssv1445961 M 95 1 10 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nsv471518 1 308002 460787 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547888,nssv547887,nssv547890 M 3 3 0 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 JDW,NA18507,YH dgv1n14 1 311662 456464 CNV gain Cooper_et_al_2008 18776910 SNP array nsv433342,nsv433345,nsv433344 M 9 3 0 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12156,NA18555,NA19240 nsv945519 1 321543 323952 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569274,nssv2569298,nssv2569277,nssv2569242,nssv2569288,nssv2569229,nssv2569291,nssv2569295,nssv2569262,nssv2569244,nssv2569276,nssv2569252,nssv2569259,nssv2569294,nssv2569253,nssv2569300,nssv2569271,nssv2569231,nssv2569283,nssv2569237,nssv2569270,nssv2569245,nssv2569292,nssv2569235,nssv2569273,nssv2569236,nssv2569266,nssv2569241,nssv2569249,nssv2569234,nssv2569275,nssv2569251,nssv2569246,nssv2569238,nssv2569280,nssv2569230,nssv2569263,nssv2569247,nssv2569223,nssv2569301,nssv2569264,nssv2569227,nssv2569260,nssv2569239,nssv2569250,nssv2569240,nssv2569272,nssv2569233,nssv2569285,nssv2569293,nssv2569267,nssv2569224,nssv2569254,nssv2569302,nssv2569279,nssv2569296,nssv2569258,nssv2569232,nssv2569284,nssv2569225,nssv2569269,nssv2569228,nssv2569265,nssv2569226,nssv2569248,nssv2569243,nssv2569268,nssv2569299,nssv2569261,nssv2569297,nssv2569256,nssv2569282,nssv2569278,nssv2569257,nssv2569290,nssv2569281,nssv2569286,nssv2569289,nssv2569255,nssv2569287 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945520 1 323952 327563 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569380,nssv2569356,nssv2569320,nssv2569359,nssv2569306,nssv2569361,nssv2569333,nssv2569372,nssv2569383,nssv2569346,nssv2569316,nssv2569373,nssv2569317,nssv2569355,nssv2569323,nssv2569366,nssv2569313,nssv2569344,nssv2569379,nssv2569370,nssv2569324,nssv2569368,nssv2569321,nssv2569327,nssv2569376,nssv2569352,nssv2569381,nssv2569349,nssv2569310,nssv2569304,nssv2569374,nssv2569335,nssv2569322,nssv2569348,nssv2569326,nssv2569362,nssv2569375,nssv2569345,nssv2569308,nssv2569358,nssv2569332,nssv2569371,nssv2569319,nssv2569343,nssv2569314,nssv2569340,nssv2569311,nssv2569330,nssv2569307,nssv2569353,nssv2569305,nssv2569339,nssv2569325,nssv2569347,nssv2569318,nssv2569331,nssv2569377,nssv2569357,nssv2569378,nssv2569365,nssv2569328,nssv2569334,nssv2569312,nssv2569360,nssv2569315,nssv2569337,nssv2569309,nssv2569341,nssv2569382,nssv2569369,nssv2569351,nssv2569338,nssv2569367,nssv2569303,nssv2569364,nssv2569350,nssv2569329,nssv2569354,nssv2569342,nssv2569336,nssv2569363 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945713 1 327563 342169 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756053,nssv1756072,nssv1756077,nssv1756418,nssv1756071,nssv1756087,nssv1756067,nssv1756425,nssv1756060,nssv1756049,nssv1756433,nssv1756406,nssv1756431,nssv1756409,nssv1756062,nssv1756424,nssv1756061,nssv1756415,nssv1756427,nssv1756412,nssv1756065,nssv1756420,nssv1756050,nssv1756083,nssv1756063,nssv1756088,nssv1756052,nssv1756075,nssv1756434,nssv1756410,nssv1756073,nssv1756090,nssv1756432,nssv1756079,nssv1756070,nssv1756413,nssv1756080,nssv1756426,nssv1756058,nssv1756084,nssv1756066,nssv1756091,nssv1756055,nssv1756423,nssv1756068,nssv1756074,nssv1756429,nssv1756401,nssv1756056,nssv1756416,nssv1756064,nssv1756402,nssv1756051,nssv1756403,nssv1756069,nssv1756404,nssv1756059,nssv1756422,nssv1756436,nssv1756082,nssv1756054,nssv1756417,nssv1756430,nssv1756421,nssv1756435,nssv1756076,nssv1756078,nssv1756414,nssv1756057,nssv1756419,nssv1756428,nssv1756408,nssv1756407,nssv1756089,nssv1756411,nssv1756086,nssv1756081,nssv1756405,nssv1756092,nssv1756085 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945521 1 330221 332525 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569386,nssv2569402,nssv2569393,nssv2569404,nssv2569391,nssv2569409,nssv2569390,nssv2569414,nssv2569395,nssv2569387,nssv2569399,nssv2569407,nssv2569421,nssv2569389,nssv2569413,nssv2569415,nssv2569422,nssv2569425,nssv2569410,nssv2569428,nssv2569388,nssv2569426,nssv2569420,nssv2569400,nssv2569392,nssv2569416,nssv2569432,nssv2569396,nssv2569394,nssv2569406,nssv2569427,nssv2569431,nssv2569408,nssv2569403,nssv2569397,nssv2569423,nssv2569429,nssv2569384,nssv2569418,nssv2569417,nssv2569424,nssv2569430,nssv2569398,nssv2569385,nssv2569411,nssv2569405,nssv2569419,nssv2569401,nssv2569412 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945524 1 332525 333025 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570553,nssv2569440,nssv2570529,nssv2569435,nssv2570554,nssv2569439,nssv2570530,nssv2570567,nssv2570523,nssv2570522,nssv2569436,nssv2570561,nssv2570558,nssv2570533,nssv2570557,nssv2570563,nssv2570550,nssv2570526,nssv2570525,nssv2570527,nssv2570560,nssv2569443,nssv2570552,nssv2570551,nssv2569441,nssv2570555,nssv2570559,nssv2570534,nssv2570562,nssv2569434,nssv2570532,nssv2569438,nssv2570536,nssv2570566,nssv2570535,nssv2570564,nssv2569445,nssv2569442,nssv2570531,nssv2570565,nssv2569433,nssv2570537,nssv2570524,nssv2570528,nssv2569437,nssv2569444,nssv2570538,nssv2570556 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945525 1 333025 342169 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570547,nssv2571469,nssv2570546,nssv2571473,nssv2570542,nssv2571492,nssv2571490,nssv2571467,nssv2571472,nssv2570543,nssv2571500,nssv2570544,nssv2571481,nssv2571464,nssv2571489,nssv2571491,nssv2571478,nssv2571501,nssv2571499,nssv2571470,nssv2570549,nssv2571494,nssv2571486,nssv2571485,nssv2571498,nssv2571479,nssv2571480,nssv2571497,nssv2571474,nssv2570548,nssv2570540,nssv2571495,nssv2571465,nssv2571496,nssv2571471,nssv2571487,nssv2571477,nssv2570545,nssv2571484,nssv2571476,nssv2570541,nssv2571488,nssv2571468,nssv2571475,nssv2571493,nssv2571466,nssv2571483,nssv2571482 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv10050 1 337955 631462 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv24620,nssv18118,nssv18107,nssv26902,nssv18094,nssv18121,nssv24618,nssv18115,nssv14769,nssv21443,nssv18112,nssv18105,nssv14767,nssv21441,nssv21450,nssv21426,nssv21435,nssv18102,nssv21439,nssv18101,nssv18116,nssv26886,nssv18120,nssv24614,nssv18111,nssv18110,nssv24604,nssv18099,nssv28054,nssv21433,nssv21446,nssv18119,nssv18095,nssv18106,nssv24595,nssv26896,nssv18092,nssv18100,nssv18098,nssv18104,nssv18114,nssv24606,nssv21447,nssv21449,nssv24612,nssv21424,nssv24597,nssv14778,nssv18096,nssv24594,nssv14765,nssv18109 M 31 8 30 MIR6723,OR4F16,OR4F29,OR4F3 NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv945265 1 342169 361602 OTHER complex Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1677687,nssv1756442,nssv1679661,nssv1756446,nssv1677709,nssv1756483,nssv1677642,nssv1756473,nssv1677753,nssv1756477,nssv1679650,nssv1756482,nssv1686360,nssv1756467,nssv1683216,nssv1756454,nssv1679672,nssv1756453,nssv1679639,nssv1756449,nssv1679628,nssv1756463,nssv1679627,nssv1682067,nssv1677742,nssv1680921,nssv1756443,nssv1756451,nssv1677731,nssv1679594,nssv1679705,nssv1756478,nssv1682237,nssv1679775,nssv1677665,nssv1756476,nssv1677720,nssv1756484,nssv1677641,nssv1756468,nssv1677698,nssv1756440,nssv1684698,nssv1756481,nssv1679716,nssv1756455,nssv1684709,nssv1756447,nssv1677676,nssv1756470,nssv1756439,nssv1756458,nssv1677754,nssv1677927,nssv1677643,nssv1756472,nssv1756444,nssv1756437,nssv1677765,nssv1679761,nssv1679694,nssv1679073,nssv1679738,nssv1756457,nssv1679616,nssv1682178,nssv1679683,nssv1756445,nssv1677654,nssv1677816,nssv1679727,nssv1756469,nssv1756474,nssv1756461,nssv1756480,nssv1756464,nssv1756471,nssv1756448,nssv1756450,nssv1679739,nssv1681956,nssv1756452,nssv1756459,nssv1756460,nssv1756475,nssv1756462,nssv1679492,nssv1678962,nssv1756456,nssv1756441,nssv1756479,nssv1680810,nssv1679605,nssv1756465,nssv1756438,nssv1679750,nssv1756466 M 97 10 0 OR4F16,OR4F29,OR4F3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv5n100 1 346294 1039667 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002919,nsv1008043 M 29084 2 0 AGRN,C1orf159,C1orf170,FAM41C,FAM87B,HES4,ISG15,KLHL17,LINC00115,LINC01128,LOC100130417,LOC100133331,LOC100288069,MIR6723,NOC2L,OR4F16,OR4F29,OR4F3,PLEKHN1,RNF223,SAMD11 nsv514924 1 356912 358042 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2859521,nssv2861430,nssv2859918,nssv2862220,nssv2864797,nssv2862379,nssv2862685,nssv2867661,nssv2866662,nssv2865079,nssv2860015,nssv2862117,nssv2863429,nssv2859368,nssv2860775,nssv2860896,nssv2863469,nssv2864877,nssv2866517,nssv2862348,nssv2863551,nssv2867206,nssv2864835,nssv2862593,nssv2864967,nssv2862420,nssv2860354,nssv2862417,nssv2866175,nssv2867250,nssv2861053,nssv2860882,nssv2865606,nssv2864782,nssv2860603,nssv2859248,nssv2859402,nssv2862673,nssv2861234,nssv2858809,nssv2863225,nssv2866779,nssv2866044,nssv2864035,nssv2861656,nssv2862194,nssv2862784,nssv2866347,nssv2862828,nssv2863452,nssv2866540,nssv2859557,nssv2861519,nssv2865175,nssv2864276,nssv2859187,nssv2866340,nssv2865195,nssv2865221,nssv2858625,nssv2864960,nssv2860934,nssv2866864,nssv2861928,nssv2860830,nssv2861881,nssv2864160,nssv2866126,nssv2867570,nssv2865996,nssv2866973,nssv2860512,nssv2859293,nssv2861414,nssv2868325,nssv2866054,nssv2864149,nssv2863412,nssv2863347,nssv2859989,nssv2860284,nssv2867319,nssv2862541,nssv2858909,nssv2862208,nssv2866251,nssv2864719,nssv2858632,nssv2862545,nssv2859792,nssv2863532,nssv2866686,nssv2862512,nssv2866632,nssv2861953,nssv2868253,nssv2862258,nssv2863997,nssv2867595,nssv2861957,nssv2860769,nssv2864925,nssv2866752,nssv2862565,nssv2866637,nssv2866835,nssv2867200,nssv2865633,nssv2864941,nssv2863561,nssv2865338,nssv2858843,nssv2860276,nssv2866581,nssv2863369,nssv2858797,nssv2861599,nssv2861967,nssv2859894,nssv2867889,nssv2861639,nssv2868158,nssv2862500,nssv2862975,nssv2860753,nssv2858659,nssv2861345,nssv2862714,nssv2866598,nssv2865663,nssv2864758,nssv2867004,nssv2861837,nssv2862363,nssv2868182,nssv2858904,nssv2861926,nssv2867752,nssv2862554,nssv2862897,nssv2858631,nssv2866478,nssv2867671,nssv2866982,nssv2864103,nssv2859039,nssv2866883,nssv2861737,nssv2864997,nssv2862740,nssv2863885,nssv2862493,nssv2865461,nssv2859497,nssv2862207,nssv2862494,nssv2858724,nssv2862783,nssv2863949,nssv2862285,nssv2861150,nssv2859933,nssv2865836,nssv2859623,nssv2860916,nssv2863163,nssv2866878,nssv2866547,nssv2859254,nssv2864216,nssv2865436,nssv2861593,nssv2863820,nssv2867930,nssv2858824,nssv2863508,nssv2860049,nssv2866012,nssv2861858,nssv2866554,nssv2864598,nssv2863290,nssv2867543,nssv2859498,nssv2867383,nssv2863813,nssv2866447,nssv2864759,nssv2859078,nssv2866532,nssv2862367,nssv2867757,nssv2864063,nssv2863100,nssv2863049,nssv2866132,nssv2862441,nssv2860480,nssv2864546,nssv2861874,nssv2865057,nssv2864857,nssv2866764,nssv2867737,nssv2865435,nssv2866048,nssv2862815,nssv2863835,nssv2863812,nssv2865846,nssv2860240,nssv2859345,nssv2859398,nssv2858723,nssv2860657,nssv2859879,nssv2858963,nssv2863983,nssv2866984,nssv2860621,nssv2858945,nssv2859837,nssv2867598,nssv2859697,nssv2864577,nssv2863806,nssv2860674,nssv2858950,nssv2864408,nssv2864217,nssv2858933,nssv2865207,nssv2864567,nssv2865946,nssv2865659,nssv2860416,nssv2866422,nssv2866971,nssv2862754,nssv2866121,nssv2868254,nssv2867890,nssv2864695,nssv2859890,nssv2864578,nssv2862284,nssv2859280,nssv2860534,nssv2867689,nssv2861241,nssv2867382,nssv2865550,nssv2860382,nssv2862927,nssv2862123,nssv2863335,nssv2868309,nssv2866061,nssv2860438,nssv2862921,nssv2864615,nssv2866661,nssv2864353,nssv2863901,nssv2862400,nssv2861542,nssv2862168,nssv2865821,nssv2862808,nssv2866565,nssv2864736,nssv2858495,nssv2863346,nssv2864195,nssv2861853,nssv2868231,nssv2859691,nssv2866555,nssv2867303,nssv2862765,nssv2868361,nssv2867293,nssv2867834,nssv2860428,nssv2859457,nssv2859034,nssv2862029,nssv2864671,nssv2867947,nssv2865956,nssv2861413,nssv2866209,nssv2866687,nssv2861784,nssv2866853,nssv2863516,nssv2862600,nssv2863759,nssv2867490,nssv2866831,nssv2864045,nssv2860871,nssv2864259,nssv2866668,nssv2864777,nssv2867103,nssv2859361,nssv2860372,nssv2864823,nssv2862988,nssv2861518,nssv2860353,nssv2863821,nssv2866683,nssv2867218,nssv2862460,nssv2859791,nssv2861826,nssv2862009,nssv2867933,nssv2861002,nssv2861167,nssv2861045,nssv2861299,nssv2862976,nssv2864233,nssv2860554,nssv2864990,nssv2859860,nssv2866972,nssv2859091,nssv2863170,nssv2862147,nssv2864388,nssv2865277,nssv2865583,nssv2868474,nssv2867249,nssv2866840,nssv2865554,nssv2867072,nssv2865173,nssv2858699,nssv2866556,nssv2864316,nssv2863224,nssv2866409,nssv2865553,nssv2865437,nssv2866346,nssv2864604,nssv2863731,nssv2859077,nssv2863615,nssv2860469,nssv2860592,nssv2862326,nssv2867973,nssv2864173,nssv2867682,nssv2862141,nssv2864044,nssv2862030,nssv2859275,nssv2860388,nssv2868243,nssv2862091,nssv2858819,nssv2864440,nssv2866856,nssv2864909,nssv2866751,nssv2865396,nssv2859221,nssv2864064,nssv2867774,nssv2866548,nssv2866203,nssv2866264,nssv2863203,nssv2864018,nssv2866265,nssv2858519,nssv2865414,nssv2868031,nssv2860771,nssv2863496,nssv2859526,nssv2861022,nssv2861157,nssv2862841,nssv2860982,nssv2864976,nssv2868103,nssv2861562,nssv2859326,nssv2865093,nssv2865808,nssv2861018,nssv2868339,nssv2864389,nssv2862660,nssv2861438,nssv2867749,nssv2862314,nssv2860808,nssv2861583,nssv2860915,nssv2866575,nssv2866104,nssv2866708,nssv2866195,nssv2867047,nssv2866798,nssv2862469,nssv2866094,nssv2862596,nssv2858554,nssv2862985,nssv2868492,nssv2861803,nssv2866867,nssv2866240,nssv2859548,nssv2867390,nssv2859917,nssv2864268,nssv2867457,nssv2863643,nssv2865136,nssv2864280,nssv2864179,nssv2862722,nssv2862180,nssv2866797,nssv2860347,nssv2866977,nssv2859401,nssv2866039,nssv2858648,nssv2862035,nssv2860415,nssv2864374,nssv2864057,nssv2864528,nssv2863873,nssv2862759,nssv2862953,nssv2866645,nssv2863590,nssv2864368,nssv2864957,nssv2864260,nssv2866652,nssv2861377,nssv2867027,nssv2865056,nssv2864400,nssv2862059,nssv2867451,nssv2862008,nssv2864885,nssv2864966,nssv2862431,nssv2862024,nssv2859106,nssv2863502,nssv2868006,nssv2860091,nssv2867487,nssv2863998,nssv2861944,nssv2860628,nssv2866970,nssv2864032,nssv2864914,nssv2863943,nssv2865032,nssv2864905,nssv2861893,nssv2860550,nssv2867020,nssv2865200,nssv2860829,nssv2865025,nssv2859993,nssv2859168,nssv2863474 M 2366 488 0 OR4F16,OR4F29,OR4F3 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv945715 1 361602 425245 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756502,nssv1756523,nssv1756513,nssv1756546,nssv1756514,nssv1756552,nssv1756491,nssv1756521,nssv1755723,nssv1756538,nssv1756507,nssv1756532,nssv1756488,nssv1756508,nssv1756494,nssv1756517,nssv1756503,nssv1756535,nssv1756500,nssv1756543,nssv1756497,nssv1756511,nssv1756486,nssv1756522,nssv1755727,nssv1756520,nssv1756493,nssv1756536,nssv1755729,nssv1756537,nssv1756498,nssv1756539,nssv1755724,nssv1756485,nssv1756499,nssv1756524,nssv1756489,nssv1756547,nssv1756506,nssv1756533,nssv1755726,nssv1756553,nssv1755722,nssv1756548,nssv1756504,nssv1756519,nssv1756509,nssv1756549,nssv1755730,nssv1756551,nssv1755725,nssv1756510,nssv1756492,nssv1756550,nssv1756487,nssv1756525,nssv1755731,nssv1756544,nssv1756496,nssv1756515,nssv1756501,nssv1756512,nssv1756490,nssv1756542,nssv1756495,nssv1756534,nssv1756505,nssv1756531,nssv1755728,nssv1756526,nssv1756516,nssv1756527,nssv1756541,nssv1756540,nssv1756545,nssv1756530,nssv1755721,nssv1756529,nssv1756518,nssv1756528 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv544874 1 368868 444511 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707624 M 17421 0 1 "" esv3438382 1 375652 376550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692318 M 185 1 0 "" NA19239 nsv945527 1 387744 399328 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571511,nssv2571528,nssv2571510,nssv2571517,nssv2571506,nssv2571542,nssv2571513,nssv2571523,nssv2571548,nssv2571534,nssv2571547,nssv2571551,nssv2571550,nssv2571544,nssv2571522,nssv2571531,nssv2571533,nssv2571516,nssv2571546,nssv2571518,nssv2571509,nssv2571539,nssv2571545,nssv2571532,nssv2571540,nssv2571520,nssv2571530,nssv2571525,nssv2571504,nssv2571524,nssv2571536,nssv2571541,nssv2571507,nssv2571537,nssv2571543,nssv2571519,nssv2571538,nssv2571515,nssv2571529,nssv2571508,nssv2571526,nssv2571549,nssv2571535,nssv2571512,nssv2571521,nssv2571505,nssv2571527,nssv2571514 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945528 1 399328 403398 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571555,nssv2571587,nssv2571560,nssv2571552,nssv2571559,nssv2571569,nssv2571562,nssv2571553,nssv2571591,nssv2571564,nssv2571576,nssv2571598,nssv2571597,nssv2571586,nssv2571579,nssv2571578,nssv2571594,nssv2571599,nssv2571566,nssv2571558,nssv2571580,nssv2571583,nssv2571556,nssv2571571,nssv2571572,nssv2571573,nssv2571585,nssv2571563,nssv2571574,nssv2571593,nssv2571592,nssv2571595,nssv2571561,nssv2571575,nssv2571565,nssv2571589,nssv2571590,nssv2571588,nssv2571584,nssv2571600,nssv2571557,nssv2571582,nssv2571567,nssv2571581,nssv2571570,nssv2571568,nssv2571596,nssv2571554,nssv2571577 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3359178 1 399852 403750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692323 M 185 1 0 "" NA12878 nsv945529 1 403398 405777 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571604,nssv2571618,nssv2571611,nssv2571622,nssv2571609,nssv2571607,nssv2571608,nssv2571639,nssv2571636,nssv2571628,nssv2571633,nssv2571648,nssv2571632,nssv2571647,nssv2571610,nssv2571634,nssv2571646,nssv2571640,nssv2571635,nssv2571613,nssv2571615,nssv2571619,nssv2571637,nssv2571601,nssv2571644,nssv2571616,nssv2571614,nssv2571617,nssv2571605,nssv2571626,nssv2571625,nssv2571612,nssv2571621,nssv2571629,nssv2571645,nssv2571643,nssv2571627,nssv2571638,nssv2571641,nssv2571620,nssv2571623,nssv2571631,nssv2571606,nssv2571630,nssv2571642,nssv2571602,nssv2571624,nssv2571603,nssv2571649 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945530 1 405777 410251 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571659,nssv2571651,nssv2571656,nssv2571655,nssv2571657,nssv2571653,nssv2571652,nssv2571658,nssv2571650,nssv2571660,nssv2571654 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945532 1 410251 412695 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571671,nssv2571663,nssv2571668,nssv2571665,nssv2571664,nssv2571667,nssv2571669,nssv2571670,nssv2571662,nssv2571672,nssv2571666 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945533 1 412695 414148 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571683,nssv2571682,nssv2571676,nssv2571674,nssv2571680,nssv2571675,nssv2571681,nssv2571677,nssv2571679,nssv2571673,nssv2571684,nssv2571678 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945535 1 414148 415913 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571694,nssv2571689,nssv2571691,nssv2571685,nssv2571692,nssv2571690,nssv2571687,nssv2571688,nssv2571696,nssv2571693,nssv2571695,nssv2571686 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3444251 1 414952 417550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692326 M 185 1 0 "" NA12878 esv3416681 1 414952 419350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692327 M 185 1 0 "" NA19238 nsv945536 1 415913 416917 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571706,nssv2571701,nssv2571703,nssv2571698,nssv2571704,nssv2571708,nssv2571699,nssv2571700,nssv2571697,nssv2571705,nssv2571707,nssv2571702 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945537 1 416917 425245 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571718,nssv2571710,nssv2571711,nssv2571720,nssv2571715,nssv2571714,nssv2571716,nssv2571712,nssv2571713,nssv2571709,nssv2571719,nssv2571717 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3347881 1 420852 422350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692334 M 185 1 0 "" NA12878 nsv945539 1 425245 428551 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571730,nssv2571725,nssv2571727,nssv2571721,nssv2571723,nssv2571726,nssv2571728,nssv2571729,nssv2571724,nssv2571731,nssv2571722 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv994970 1 426592 450877 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586250 M 3 0 1 "" HuRef nsv945716 1 428551 449807 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755734,nssv1755742,nssv1755738,nssv1755733,nssv1755741,nssv1755735,nssv1755739,nssv1755736,nssv1755732,nssv1755737,nssv1755740 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3391927 1 440752 442250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692342 M 185 1 0 "" NA19238 esv3426596 1 440752 443450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692343 M 185 1 0 "" NA19240 esv3334942 1 440852 446950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692344 M 185 1 0 "" NA19239 esv3410685 1 446152 449550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692345 M 185 1 0 "" NA12878 nsv945717 1 449807 453503 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755749,nssv1748171,nssv1755745,nssv1755779,nssv1755750,nssv1755747,nssv1755752,nssv1755769,nssv1755753,nssv1755768,nssv1755772,nssv1748175,nssv1755755,nssv1755770,nssv1755760,nssv1755778,nssv1755782,nssv1755744,nssv1755783,nssv1755775,nssv1748170,nssv1755759,nssv1755761,nssv1748172,nssv1748173,nssv1755746,nssv1755771,nssv1755777,nssv1755763,nssv1755766,nssv1755743,nssv1755774,nssv1755756,nssv1755780,nssv1755757,nssv1755764,nssv1755781,nssv1755773,nssv1755776,nssv1748174,nssv1755762,nssv1755748,nssv1755767,nssv1755751,nssv1755754,nssv1755784,nssv1755758,nssv1755765 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv8e59 1 450552 461150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3445983,esv3381255 M 185 2 0 "" NA12878,NA12892 esv3419296 1 450652 451650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692347 M 185 1 0 "" NA19238 esv1004360 1 450924 461231 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586709 M 3 1 0 "" HuRef nsv945718 1 453503 461453 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1748178,nssv2571743,nssv1748253,nssv1748216,nssv2571735,nssv1748236,nssv1748191,nssv1748241,nssv2571742,nssv2571734,nssv1748189,nssv1748222,nssv1748254,nssv1749498,nssv1749488,nssv1748235,nssv1748205,nssv1748248,nssv1748255,nssv1748237,nssv1748190,nssv1748249,nssv2571739,nssv1748217,nssv1748195,nssv1748203,nssv1748181,nssv1748239,nssv1748192,nssv1748219,nssv1749489,nssv1749501,nssv1748207,nssv1748238,nssv1749494,nssv1748218,nssv1748182,nssv1748214,nssv2571740,nssv1748231,nssv1748184,nssv2571733,nssv1748188,nssv1748213,nssv1748177,nssv1748208,nssv1748194,nssv1748245,nssv1749491,nssv1748221,nssv1748193,nssv1748229,nssv1748187,nssv1748212,nssv1748197,nssv1748251,nssv1748183,nssv1749496,nssv1748200,nssv1748250,nssv1749492,nssv1748240,nssv1749493,nssv1748230,nssv1748185,nssv1748223,nssv1748179,nssv1749502,nssv1748196,nssv1749500,nssv1748204,nssv1749499,nssv1748198,nssv1749504,nssv1749490,nssv2571738,nssv1748180,nssv1748228,nssv1748186,nssv1748215,nssv2571736,nssv1748227,nssv2571737,nssv1749497,nssv1748176,nssv1749495,nssv1748224,nssv1748232,nssv1748220,nssv1748242,nssv1748234,nssv1748233,nssv1748209,nssv1749503,nssv2571741,nssv1748199,nssv1748243,nssv1748247,nssv1748201,nssv1748246,nssv1748225,nssv1748211,nssv1748206,nssv1748244,nssv1748252,nssv1748210,nssv1748226,nssv1748202 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv2n82 1 510953 513613 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv945540,nsv945719 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv21732 1 511276 713934 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10580,esv20880,esv17670,esv12770,esv12525,esv19173,esv17284,esv18879,esv17045,esv19351,esv18811,esv17998,esv17928,esv16417 M 40 23 16 LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 NA06985,NA07037,NA07045,NA11894,NA11993,NA12006,NA12044,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18505,NA18511,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19190,NA19225,NA19240 esv992503 1 511321 537742 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586722 M 3 0 1 "" HuRef nsv471522 1 512002 746646 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547898,nssv547899,nssv547897 M 3 3 0 FAM87B,LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 JDW,NA18507,YH nsv945721 1 513613 519674 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571766,nssv2571767,nssv2571763,nssv2571761,nssv2571764,nssv2571762,nssv2571759,nssv2571758,nssv2571757,nssv2571765,nssv2571760,nssv2571756 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945720 1 513613 536247 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749562,nssv1749553,nssv1749555,nssv1749563,nssv1749560,nssv1749554,nssv1749559,nssv1749561,nssv1749558,nssv1749557,nssv1749556 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3444717 1 519352 524650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692356 M 185 1 0 "" NA19238 esv3324015 1 521352 522250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692357 M 185 1 0 "" NA12878 dgv9e59 1 522952 524050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3442814,esv3367382 M 185 2 0 "" NA19239,NA19240 nsv830758 1 529118 646613 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441851,nssv1442073,nssv1442295,nssv1441740,nssv1442517,nssv1442406,nssv1442184,nssv1441962 M 95 0 8 MIR6723,OR4F16,OR4F29,OR4F3 esv3350472 1 534352 536050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692365 M 185 1 0 "" NA12878 nsv544875 1 534829 559467 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707625 M 17421 1 0 MIR6723 nsv945723 1 536247 539210 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573010,nssv2571770,nssv2573007,nssv2573009,nssv2573008,nssv2573005,nssv2571771,nssv2571769,nssv2573006,nssv2573004,nssv2573011 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945722 1 536247 553759 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749566,nssv1749611,nssv1749585,nssv1749619,nssv1749574,nssv1749589,nssv1749575,nssv1749598,nssv1749579,nssv1749601,nssv1749637,nssv1749564,nssv1749588,nssv1749602,nssv1749642,nssv1749624,nssv1749568,nssv1749629,nssv1749595,nssv1749604,nssv1749569,nssv1749615,nssv1749583,nssv1749621,nssv1749584,nssv1749587,nssv1749634,nssv1749631,nssv1749638,nssv1749630,nssv1749565,nssv1749632,nssv1749580,nssv1749620,nssv1749592,nssv1749622,nssv1749643,nssv1749605,nssv1749577,nssv1749627,nssv1749578,nssv1749610,nssv1749639,nssv1749614,nssv1749640,nssv1749594,nssv1749635,nssv1749628,nssv1749572,nssv1749590,nssv1749570,nssv1749618,nssv1749636,nssv1749625,nssv1749571,nssv1749600,nssv1749593,nssv1749623,nssv1749573,nssv1749626,nssv1749582,nssv1749596,nssv1749581,nssv1749603,nssv1749576,nssv1749616,nssv1749641,nssv1749608,nssv1749586,nssv1749607,nssv1749567,nssv1749599,nssv1749612,nssv1749609,nssv1749606,nssv1749591,nssv1749597,nssv1749633,nssv1749613,nssv1749617 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv10e59 1 536552 537850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3377615,esv3393054 M 185 2 0 "" NA12878,NA12891 nsv945542 1 539210 547395 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573022,nssv2573021,nssv2573019,nssv2573014,nssv2573020,nssv2573023,nssv2573015,nssv2573013,nssv2573016,nssv2573018,nssv2573012,nssv2573017 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv11e59 1 543952 548650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3399854,esv3433794 M 185 2 0 "" NA12878,NA19238 nsv945543 1 547395 553759 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573032,nssv2573035,nssv2573031,nssv2573034,nssv2573027,nssv2573033,nssv2573029,nssv2573026,nssv2573028,nssv2573030,nssv2573025,nssv2573024 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945724 1 553759 559919 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749723,nssv1749684,nssv1749656,nssv1749674,nssv1749654,nssv1749735,nssv1749672,nssv1749715,nssv1749728,nssv1749689,nssv1749724,nssv1749719,nssv1749651,nssv1749692,nssv1749721,nssv1749690,nssv1749668,nssv1749697,nssv1749647,nssv1749708,nssv1749655,nssv1749669,nssv1749725,nssv1749670,nssv1749646,nssv1749677,nssv1749650,nssv1749714,nssv1749648,nssv1749686,nssv1749659,nssv1749720,nssv1749649,nssv1749693,nssv1749664,nssv1749739,nssv1749666,nssv1749705,nssv1749663,nssv1749681,nssv1749675,nssv1749644,nssv1749660,nssv1749716,nssv1749645,nssv1749678,nssv1749658,nssv1749733,nssv1749665,nssv1749682,nssv1749729,nssv1749691,nssv1749730,nssv1749702,nssv1749727,nssv1749713,nssv1749652,nssv1749709,nssv1749661,nssv1749698,nssv1749653,nssv1749701,nssv1749662,nssv1749712,nssv1749726,nssv1749699,nssv1749722,nssv1749738,nssv1749657,nssv1749688,nssv1749673,nssv1749734,nssv1749707,nssv1749717,nssv1749676,nssv1749710,nssv1749695,nssv1749694,nssv1749700,nssv1749685,nssv1749667,nssv1749680,nssv1749732,nssv1749740,nssv1749706,nssv1749737,nssv1749704,nssv1749683,nssv1749718,nssv1749731,nssv1749679,nssv1749703,nssv1749696,nssv1749671,nssv1749687,nssv1749736,nssv1749711 M 97 10 0 MIR6723 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3417080 1 554252 560250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692377 M 185 1 0 MIR6723 NA19239 dgv1e24 1 554297 639610 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH esv2750552,esv2750735,esv2750643,esv2750751,esv2750642,esv2750702,esv2750566,esv2750488,esv2750655,esv2750730,esv2750723,esv2750553,esv2750575 M 51 0 13 MIR6723,OR4F16,OR4F29,OR4F3 21634,21837,21847,21863,21872,21911,21938,21972,22007,22170,22231,22278,22371 dgv2n14 1 554340 696231 CNV gain Cooper_et_al_2008 18776910 SNP array nsv433347,nsv433346 M 9 2 0 LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 NA12156,NA19240 nsv820617 1 554403 560638 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1419880 M 1 1 0 MIR6723 NA10851 nsv945544 1 554419 555951 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573041,nssv2573044,nssv2573037,nssv2573039,nssv2573042,nssv2573045,nssv2573043,nssv2573036,nssv2573038,nssv2573040 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1004962 1 554484 840538 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696751 M 29084 1 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 nsv1003571 1 554636 788822 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466368 M 29084 0 1 FAM87B,LINC00115,LINC01128,LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 nsv544876 1 554725 558326 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707626 M 17421 0 1 MIR6723 dgv3n54 1 555353 560041 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544878,nsv544877 M 17421 0 2 MIR6723 nsv945546 1 558017 559319 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573047,nssv2573046,nssv2573051,nssv2573055,nssv2573052,nssv2573053,nssv2573054,nssv2573049,nssv2573050,nssv2573048 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945727 1 559919 564802 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573062,nssv2573059,nssv2573063,nssv2573064,nssv2573058,nssv2573060,nssv2573065,nssv2573061,nssv2573057,nssv2573066,nssv2573056 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945726 1 559919 607773 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749770,nssv1749780,nssv1749769,nssv1749768,nssv1750742,nssv1750724,nssv1749754,nssv1749766,nssv1749753,nssv1749779,nssv1750740,nssv1749773,nssv1749765,nssv1750734,nssv1750736,nssv1750733,nssv1750741,nssv1750729,nssv1750738,nssv1749786,nssv1749745,nssv1749794,nssv1749746,nssv1749790,nssv1749756,nssv1749767,nssv1749752,nssv1749776,nssv1749750,nssv1749782,nssv1749762,nssv1750725,nssv1749744,nssv1749783,nssv1749760,nssv1749774,nssv1749761,nssv1749789,nssv1749757,nssv1749778,nssv1750739,nssv1749788,nssv1749755,nssv1750726,nssv1749751,nssv1750730,nssv1750737,nssv1750731,nssv1750735,nssv1749741,nssv1749749,nssv1749775,nssv1749759,nssv1749771,nssv1749742,nssv1750728,nssv1750744,nssv1749792,nssv1749748,nssv1749764,nssv1749758,nssv1749781,nssv1749743,nssv1750727,nssv1749747,nssv1749785,nssv1749772,nssv1750723,nssv1749763,nssv1749795,nssv1750743,nssv1749791,nssv1749787,nssv1750721,nssv1750720,nssv1750722,nssv1749784,nssv1749793,nssv1750732,nssv1749777 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3362065 1 561052 569850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692378 M 185 1 0 "" NA12878 nsv945547 1 564802 570228 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573074,nssv2573087,nssv2573075,nssv2573069,nssv2573070,nssv2573108,nssv2573086,nssv2573092,nssv2573084,nssv2573098,nssv2573110,nssv2573102,nssv2573104,nssv2573073,nssv2573115,nssv2573096,nssv2573095,nssv2573101,nssv2573077,nssv2573093,nssv2573106,nssv2573091,nssv2573094,nssv2573111,nssv2573081,nssv2573089,nssv2573107,nssv2573112,nssv2573071,nssv2573113,nssv2573105,nssv2573072,nssv2573097,nssv2573109,nssv2573090,nssv2573088,nssv2573079,nssv2573100,nssv2573076,nssv2573103,nssv2573114,nssv2573080,nssv2573078,nssv2573085,nssv2573099,nssv2573082,nssv2573083,nssv2573068 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3393199 1 566652 568850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692385 M 185 1 0 "" NA19240 nsv831869 1 569355 733174 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442629,nssv1443184,nssv1442740,nssv1443406,nssv1443073,nssv1443295,nssv1442962,nssv1442851,nssv1443517,nssv1443628 M 95 8 2 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nsv945549 1 570228 572021 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573123,nssv2573135,nssv2573124,nssv2573154,nssv2573119,nssv2573137,nssv2573152,nssv2573157,nssv2573156,nssv2573127,nssv2573134,nssv2573132,nssv2573161,nssv2573160,nssv2573117,nssv2573142,nssv2573143,nssv2573149,nssv2573133,nssv2573145,nssv2573126,nssv2573155,nssv2573118,nssv2573125,nssv2573153,nssv2573151,nssv2573158,nssv2573129,nssv2573141,nssv2573159,nssv2573147,nssv2573139,nssv2573120,nssv2573130,nssv2573131,nssv2573138,nssv2573148,nssv2573140,nssv2573121,nssv2573128,nssv2573150,nssv2573162,nssv2573144,nssv2573136,nssv2573163,nssv2573122,nssv2573164,nssv2573146 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3363248 1 581952 582850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692393 M 185 1 0 "" NA19238 dgv12e59 1 593552 595150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3383793,esv3428101 M 185 2 0 "" NA19239,NA19240 nsv945736 1 607773 627267 OTHER complex Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750752,nssv1750756,nssv1683214,nssv1750750,nssv1750751,nssv1685641,nssv1684714,nssv1750780,nssv1684710,nssv1750768,nssv1683217,nssv1750765,nssv1684708,nssv1750760,nssv1682260,nssv1750773,nssv1683206,nssv1751179,nssv1683218,nssv1750775,nssv1683211,nssv1686462,nssv1684422,nssv1686496,nssv1683213,nssv1750753,nssv1684722,nssv1751183,nssv1683212,nssv1750771,nssv1683219,nssv1750778,nssv1684523,nssv1750766,nssv1684713,nssv1684701,nssv1683221,nssv1684704,nssv1683215,nssv1750774,nssv1683195,nssv1684705,nssv1684715,nssv1750782,nssv1750747,nssv1750755,nssv1684712,nssv1751184,nssv1683220,nssv1751176,nssv1684707,nssv1684702,nssv1682238,nssv1750769,nssv1682226,nssv1686493,nssv1684624,nssv1750767,nssv1683296,nssv1686494,nssv1685439,nssv1750759,nssv1684711,nssv1751178,nssv1684699,nssv1751180,nssv1750754,nssv1750749,nssv1683397,nssv1751185,nssv1682249,nssv1750762,nssv1751181,nssv1750779,nssv1750764,nssv1750757,nssv1750758,nssv1686498,nssv1750776,nssv1750772,nssv1685540,nssv1750777,nssv1684703,nssv1686495,nssv1750748,nssv1750761,nssv1751177,nssv1750746,nssv1751182,nssv1684700,nssv1686361,nssv1750763,nssv1750770,nssv1750781,nssv1686497,nssv1684706,nssv1750745 M 97 10 0 OR4F16,OR4F29,OR4F3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv544879 1 619605 687793 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707629 M 17421 0 1 LOC100133331 nsv945730 1 627267 631228 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573175,nssv2573166,nssv2573168,nssv2573177,nssv2573172,nssv2573186,nssv2573173,nssv2573190,nssv2573171,nssv2573184,nssv2573209,nssv2573207,nssv2573193,nssv2573199,nssv2573195,nssv2573170,nssv2573201,nssv2573194,nssv2573182,nssv2573169,nssv2573179,nssv2573181,nssv2573198,nssv2573210,nssv2573189,nssv2573212,nssv2573192,nssv2573167,nssv2573174,nssv2573185,nssv2573208,nssv2573205,nssv2573213,nssv2573197,nssv2573202,nssv2573206,nssv2573180,nssv2573211,nssv2573204,nssv2573183,nssv2573203,nssv2573188,nssv2573200,nssv2573196,nssv2573178,nssv2573187,nssv2573191,nssv2573176 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945729 1 627267 652296 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751217,nssv1751244,nssv1751198,nssv1751247,nssv1751207,nssv1751252,nssv1751201,nssv1751235,nssv1751214,nssv1751239,nssv1751189,nssv1751226,nssv1751261,nssv1751248,nssv1751263,nssv1751224,nssv1751208,nssv1751230,nssv1751257,nssv1751213,nssv1751259,nssv1751221,nssv1751199,nssv1751249,nssv1751196,nssv1751223,nssv1751187,nssv1751233,nssv1751262,nssv1751228,nssv1751188,nssv1751225,nssv1751210,nssv1751243,nssv1751200,nssv1751216,nssv1751191,nssv1751218,nssv1751197,nssv1751253,nssv1751215,nssv1751209,nssv1751256,nssv1751255,nssv1751260,nssv1751254,nssv1751193,nssv1751246,nssv1751202,nssv1751231,nssv1751190,nssv1751250,nssv1751194,nssv1751241,nssv1751265,nssv1751212,nssv1751192,nssv1751238,nssv1751258,nssv1751240,nssv1751195,nssv1751237,nssv1751204,nssv1751236,nssv1751203,nssv1751222,nssv1751264,nssv1751211,nssv1751206,nssv1751220,nssv1751205,nssv1751251,nssv1751219,nssv1751232,nssv1751245,nssv1751242,nssv1751234,nssv1751186,nssv1751227,nssv1751229 M 97 10 0 LOC100133331 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945551 1 631228 636483 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573222,nssv2573253,nssv2573217,nssv2573245,nssv2573221,nssv2573261,nssv2573249,nssv2573239,nssv2573220,nssv2573236,nssv2573232,nssv2573219,nssv2573257,nssv2573234,nssv2573229,nssv2573255,nssv2571023,nssv2573259,nssv2573235,nssv2573250,nssv2573218,nssv2573224,nssv2573238,nssv2573256,nssv2573260,nssv2573225,nssv2573237,nssv2573248,nssv2573242,nssv2573240,nssv2573241,nssv2573252,nssv2573243,nssv2573226,nssv2573228,nssv2573230,nssv2573246,nssv2573215,nssv2573247,nssv2573233,nssv2573244,nssv2573231,nssv2573258,nssv2573251,nssv2573216,nssv2573223,nssv2573227,nssv2573254 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945552 1 636483 636983 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571027,nssv2571048,nssv2571035,nssv2571072,nssv2571033,nssv2571037,nssv2571031,nssv2571070,nssv2571057,nssv2571050,nssv2571056,nssv2571051,nssv2571024,nssv2571055,nssv2571068,nssv2571062,nssv2571044,nssv2571071,nssv2571067,nssv2571038,nssv2571046,nssv2571060,nssv2571041,nssv2571045,nssv2571042,nssv2571063,nssv2571047,nssv2571036,nssv2571066,nssv2571025,nssv2571034,nssv2571069,nssv2571026,nssv2571030,nssv2571049,nssv2571064,nssv2571077,nssv2571039,nssv2571075,nssv2571073,nssv2571040,nssv2571028,nssv2571029,nssv2571052,nssv2571059,nssv2571053,nssv2571074,nssv2571061,nssv2571058 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945732 1 652296 720191 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751961,nssv1751325,nssv1751275,nssv1751266,nssv1751268,nssv1751314,nssv1751278,nssv1751312,nssv1751966,nssv1751307,nssv1751959,nssv1751974,nssv1751294,nssv1751302,nssv1751287,nssv1751291,nssv1751297,nssv1751289,nssv1751272,nssv1751300,nssv1751277,nssv1751953,nssv1751279,nssv1751304,nssv1751288,nssv1751955,nssv1751282,nssv1751958,nssv1751967,nssv1751322,nssv1751267,nssv1751332,nssv1751962,nssv1751309,nssv1751276,nssv1751975,nssv1751295,nssv1751978,nssv1751271,nssv1751320,nssv1751280,nssv1751327,nssv1751290,nssv1751315,nssv1751273,nssv1751319,nssv1751281,nssv1751310,nssv1751965,nssv1751956,nssv1751963,nssv1751954,nssv1751270,nssv1751977,nssv1751964,nssv1751292,nssv1751274,nssv1751296,nssv1751284,nssv1751308,nssv1751968,nssv1751293,nssv1751960,nssv1751305,nssv1751283,nssv1751299,nssv1751286,nssv1751301,nssv1751269,nssv1751324,nssv1751285,nssv1751957,nssv1751970,nssv1751329,nssv1751306,nssv1751298,nssv1751303,nssv1751333,nssv1751313,nssv1751323,nssv1751334,nssv1751976,nssv1751311,nssv1751318,nssv1751328,nssv1751971,nssv1751335,nssv1751321,nssv1751326,nssv1751952,nssv1751330,nssv1751331,nssv1751316,nssv1751972,nssv1751969,nssv1751973,nssv1751317 M 97 10 0 LOC100133331,LOC100288069 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3361605 1 663252 665450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692399 M 185 1 0 "" NA12878 esv3345025 1 663452 664850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692400 M 185 1 0 "" NA12891 nsv999785 1 696950 788822 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463004 M 29084 1 0 FAM87B,LINC00115,LINC01128,LOC100288069 esv2762129 1 696962 826948 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7004879 M 1109 1 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100288069 RW_0585 nsv10161 1 701974 1698509 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv18108,nssv26882,nssv24602,nssv24600,nssv28946,nssv28533,nssv21436,nssv21448,nssv21431,nssv28031,nssv28029,nssv26877,nssv28038,nssv24610,nssv28921,nssv26876,nssv24621,nssv28542,nssv28048,nssv28552,nssv26879,nssv26892,nssv28940,nssv21429,nssv28558,nssv26888 M 31 11 7 ACAP3,AGRN,ANKRD65,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf233,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,FAM41C,FAM87B,GLTPD1,HES4,ISG15,KLHL17,LINC00115,LINC01128,LOC100130417,LOC100288069,LOC148413,LOC254099,MIB2,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,MIR6808,MMP23A,MMP23B,MRPL20,MXRA8,NADK,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM240,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 NA07048,NA10839,NA10863,NA12740,NA12872,NA18504,NA18537,NA18552,NA18564,NA18572,NA18972,NA19144,NA19173,NA19221 nsv508722 1 707782 733936 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619756 M 4 1 0 "" NA10860 nsv510950 1 707782 737205 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621648,nssv624357 M 4 0 0 "" NA15510,NA18994 nsv513729 1 713995 716800 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626981 M 1 1 0 "" 1 nsv544880 1 714163 715600 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707630 M 17421 1 0 "" dgv4n54 1 714163 716900 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544884,nsv544883,nsv544881,nsv544882,nsv544886,nsv544888 M 17421 12 0 "" esv26272 1 714177 717108 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17593 M 40 0 4 "" NA11894,NA12006,NA12287,NA12828 nsv820807 1 714177 717108 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420291 M 1 1 0 "" NA10851 dgv5n54 1 714382 716657 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544887,nsv544885,nsv544890,nsv544891 M 17421 23 5 "" nsv544889 1 714712 716261 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707648 M 17421 0 1 "" nsv544892 1 715272 716657 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707672 M 17421 0 1 "" nsv544893 1 715600 742429 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707673 M 17421 0 1 "" nsv945734 1 728777 785238 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752023,nssv1751989,nssv1752026,nssv1752010,nssv1752039,nssv1751991,nssv1752006,nssv1751986,nssv1752004,nssv1752000,nssv1752025,nssv1751993,nssv1752032,nssv1752056,nssv1752015,nssv1752051,nssv1752024,nssv1751994,nssv1752045,nssv1751981,nssv1752041,nssv1752008,nssv1752009,nssv1752052,nssv1752035,nssv1751983,nssv1752018,nssv1751990,nssv1752036,nssv1751980,nssv1752029,nssv1752057,nssv1752034,nssv1752001,nssv1752044,nssv1751999,nssv1752012,nssv1751984,nssv1752020,nssv1752049,nssv1752037,nssv1751998,nssv1752002,nssv1751992,nssv1752047,nssv1751988,nssv1752005,nssv1751985,nssv1752033,nssv1752003,nssv1752046,nssv1752055,nssv1752040,nssv1752053,nssv1752013,nssv1751995,nssv1752043,nssv1752007,nssv1752011,nssv1752050,nssv1752022,nssv1751987,nssv1752042,nssv1752058,nssv1752019,nssv1752054,nssv1752027,nssv1751997,nssv1752030,nssv1751996,nssv1752048,nssv1751982,nssv1752016,nssv1752028,nssv1752021,nssv1752017,nssv1752031,nssv1752014,nssv1752038,nssv1751979 M 97 10 0 FAM87B,LINC00115,LINC01128 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1005935 1 730720 840538 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696752 M 29084 1 0 FAM41C,FAM87B,LINC00115,LINC01128 dgv1n67 1 736271 839800 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822808,nsv823919,nsv821697 M 31 4 0 FAM41C,FAM87B,LINC00115,LINC01128 NA18564,NA18947,NA18951,NA18972 esv3890635 1 742429 773886 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788744,essv25789091 M 3017 2 0 FAM87B,LINC00115,LINC01128 dgv1e55 1 742429 789326 CNV gain Pinto_et_al_2007 17911159 SNP array esv34681,esv34886 M 771 4 0 FAM87B,LINC00115,LINC01128 NA18620,NA18947 nsv517709 1 742429 1201155 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv657472,nssv662754,nssv677805,nssv677935,nssv667239,nssv681209,nssv688100,nssv654371,nssv658652,nssv668090,nssv662132,nssv660727,nssv691743,nssv652918,nssv683576,nssv670683,nssv669544,nssv680332,nssv700902 M 2026 18 1 AGRN,B3GALT6,C1orf159,C1orf170,FAM132A,FAM41C,FAM87B,HES4,ISG15,KLHL17,LINC00115,LINC01128,LOC100130417,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,SAMD11,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 esv27271 1 744056 752485 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14965 M 40 1 0 FAM87B,LINC00115 NA18916 esv33946 1 744068 769619 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv101171,essv96332 M 51 2 0 FAM87B,LINC00115,LINC01128 21618,22371 esv1032937 1 746130 746130 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3703690 M 2 1 0 "" HuRef nsv442837 1 755964 799636 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617613,nssv1616724,nssv1617835,nssv1616613,nssv1618057,nssv1616612,nssv1617502,nssv1617946,nssv1617391,nssv1617724,nssv1618168 M 270 10 1 FAM41C,LINC01128 NA18564,NA18571,NA18572,NA18573,NA18620,NA18635,NA18947,NA18951,NA18972,NA18976,NA18990 esv2762248 1 758656 780873 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007410 M 1109 0 1 LINC01128 SW_1162 nsv298 1 762262 782522 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3151 M 9 1 0 LINC01128 NA12878 nsv1009537 1 766985 840538 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467703 M 29084 1 0 FAM41C,LINC01128 nsv832980 1 773522 932280 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443740 M 95 1 0 C1orf170,FAM41C,HES4,KLHL17,LINC01128,LOC100130417,NOC2L,PLEKHN1,SAMD11 esv1517733 1 778884 778933 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4242314 M 2 0 1 LINC01128 HuRef nsv508924 1 779622 810192 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619757 M 4 1 0 FAM41C,LINC01128 NA10860 nsv945735 1 785238 786485 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752136,nssv1752118,nssv1752066,nssv1752135,nssv1752080,nssv1752108,nssv1752079,nssv1752084,nssv1752143,nssv1752131,nssv1752138,nssv1752101,nssv1752061,nssv1752059,nssv1752063,nssv1752148,nssv1752090,nssv1752111,nssv1752060,nssv1752153,nssv1752068,nssv1752107,nssv1752139,nssv1752103,nssv1752074,nssv1752106,nssv1752069,nssv1752146,nssv1752140,nssv1752094,nssv1752141,nssv1752095,nssv1752081,nssv1752154,nssv1752087,nssv1752120,nssv1752062,nssv1752150,nssv1752071,nssv1752152,nssv1752078,nssv1752112,nssv1752144,nssv1752149,nssv1752142,nssv1752130,nssv1752083,nssv1752125,nssv1752065,nssv1752124,nssv1752072,nssv1752104,nssv1752064,nssv1752089,nssv1752075,nssv1752092,nssv1752067,nssv1752116,nssv1752070,nssv1752086,nssv1752073,nssv1752132,nssv1752145,nssv1752155,nssv1752077,nssv1752098,nssv1752076,nssv1752082,nssv1752088,nssv1752134,nssv1752137,nssv1752147,nssv1752085,nssv1752091,nssv1752126,nssv1752113,nssv1752100,nssv1752117,nssv1752109,nssv1752122,nssv1752105,nssv1752119,nssv1752127,nssv1752123,nssv1752097,nssv1752121,nssv1752099,nssv1752110,nssv1752102,nssv1752115,nssv1752133,nssv1752096,nssv1752129,nssv1752128,nssv1752151,nssv1752114,nssv1752093 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945738 1 786485 791177 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752170,nssv1752197,nssv1752177,nssv1752212,nssv1752233,nssv1752220,nssv1752163,nssv1752183,nssv1752176,nssv1752205,nssv1752162,nssv1752215,nssv1752166,nssv1752211,nssv1752228,nssv1752201,nssv1752231,nssv1752219,nssv1752160,nssv1752190,nssv1752159,nssv1752208,nssv1752168,nssv1752216,nssv1752167,nssv1752194,nssv1752229,nssv1752196,nssv1752178,nssv1752198,nssv1752185,nssv1752199,nssv1752187,nssv1752203,nssv1752165,nssv1752193,nssv1752232,nssv1752156,nssv1752180,nssv1752200,nssv1752169,nssv1752209,nssv1752230,nssv1752217,nssv1752161,nssv1752179,nssv1752172,nssv1752186,nssv1752157,nssv1752191,nssv1752184,nssv1752192,nssv1752175,nssv1752181,nssv1752171,nssv1752204,nssv1752226,nssv1752221,nssv1752234,nssv1752210,nssv1752227,nssv1752195,nssv1752164,nssv1752214,nssv1752235,nssv1752223,nssv1752174,nssv1752222,nssv1752158,nssv1752182,nssv1752173,nssv1752206,nssv1752225,nssv1752188,nssv1752189,nssv1752224,nssv1752213,nssv1752202,nssv1752218,nssv1752207 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945739 1 791177 816402 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752239,nssv1749312,nssv1752254,nssv1749311,nssv1752243,nssv1753185,nssv1753191,nssv1753213,nssv1752247,nssv1749332,nssv1752244,nssv1753196,nssv1749317,nssv1753231,nssv1749313,nssv1749310,nssv1752242,nssv1749330,nssv1752256,nssv1753205,nssv1749319,nssv1753227,nssv1752250,nssv1753214,nssv1752238,nssv1753218,nssv1749318,nssv1749334,nssv1752246,nssv1753195,nssv1749323,nssv1753199,nssv1752251,nssv1749324,nssv1749321,nssv1753201,nssv1749322,nssv1753212,nssv1753188,nssv1753221,nssv1749314,nssv1749333,nssv1752258,nssv1753206,nssv1749316,nssv1753216,nssv1752240,nssv1753230,nssv1752248,nssv1753226,nssv1753189,nssv1753229,nssv1752249,nssv1753200,nssv1752241,nssv1753203,nssv1752257,nssv1752236,nssv1752252,nssv1753217,nssv1752245,nssv1753192,nssv1752237,nssv1753198,nssv1752255,nssv1753209,nssv1753184,nssv1753215,nssv1752253,nssv1753223,nssv1749320,nssv1753187,nssv1753219,nssv1753228,nssv1753224,nssv1749327,nssv1749325,nssv1753210,nssv1753186,nssv1753222,nssv1753193,nssv1753208,nssv1753204,nssv1753232,nssv1749331,nssv1753202,nssv1753211,nssv1753220,nssv1753225,nssv1752259,nssv1749328,nssv1749309,nssv1753194,nssv1749329,nssv1753207,nssv1753197,nssv1753190 M 97 10 0 FAM41C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1069885 1 792114 792114 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3978908 M 2 1 0 "" HuRef nsv428334 1 799614 1145812 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450908 M 62 1 0 AGRN,C1orf159,C1orf170,FAM41C,HES4,ISG15,KLHL17,LOC100130417,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,SAMD11,SDF4,TNFRSF18,TNFRSF4,TTLL10 HGDP00467 esv3325034 1 800936 801942 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652099 M 185 1 0 FAM41C NA19240 esv991325 1 800940 801701 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564868 M 3 1 0 FAM41C HuRef dgv2n67 1 802861 1351743 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv826141,nsv825030 M 31 2 0 ACAP3,AGRN,ANKRD65,AURKAIP1,B3GALT6,C1orf159,C1orf170,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC100130417,LOC148413,LOC254099,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,MIR6808,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 NA18968,NA18969 esv3382589 1 810666 810718 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740932 M 185 1 0 "" NA12878 esv3358119 1 812716 812724 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863668,essv7863667 M 185 2 0 "" NA12005,NA18953 esv3400943 1 814916 814916 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825303 M 185 1 0 "" NA19240 nsv945562 1 816402 824072 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572158,nssv2572175,nssv2572155,nssv2572161,nssv2572151,nssv2572178,nssv2572156,nssv2572184,nssv2572176,nssv2572177,nssv2572160,nssv2572182,nssv2572153,nssv2572179,nssv2572190,nssv2572166,nssv2572169,nssv2572173,nssv2572185,nssv2572171,nssv2572164,nssv2572159,nssv2572194,nssv2572167,nssv2572183,nssv2572180,nssv2572172,nssv2572157,nssv2572181,nssv2572193,nssv2572154,nssv2572192,nssv2572165,nssv2572196,nssv2572170,nssv2572174,nssv2572168,nssv2572195,nssv2572188,nssv2572189,nssv2572150,nssv2572191,nssv2572163,nssv2572162,nssv2572152,nssv2572187,nssv2572186,nssv2572149 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509035 1 816649 910967 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619758,nssv621079 M 4 2 0 C1orf170,KLHL17,LOC100130417,NOC2L,PLEKHN1,SAMD11 NA10860,NA15510 esv1562509 1 834463 834729 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3716763 M 2 0 1 "" HuRef esv2762302 1 839880 1031563 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7008521 M 1109 1 0 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 SW_1358 dgv6n54 1 842635 860173 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544894,nsv544896 M 17421 0 2 LOC100130417,SAMD11 nsv544895 1 842635 980143 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707675 M 17421 0 1 AGRN,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,SAMD11 nsv544897 1 849908 860173 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707678,nssv707677 M 17421 1 1 SAMD11 nsv544898 1 849908 869180 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707679 M 17421 1 0 SAMD11 dgv7n54 1 850997 860508 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544900,nsv544899 M 17421 0 5 SAMD11 dgv8n54 1 850997 869180 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544901,nsv544907 M 17421 0 2 SAMD11 dgv9n54 1 850997 878083 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544902,nsv544903 M 17421 0 2 NOC2L,SAMD11 nsv544904 1 854801 860120 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707689,nssv707688 M 17421 2 0 SAMD11 dgv10n54 1 854801 860508 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544906,nsv544905 M 17421 5 7 SAMD11 nsv511670 1 859114 860723 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626307 M 1 0 1 SAMD11 1 esv27608 1 859173 860210 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10036 M 40 24 12 SAMD11 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19257 esv989364 1 859278 860210 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586109 M 3 0 1 SAMD11 HuRef dgv11n54 1 859306 860120 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544920,nsv544915,nsv544908,nsv544916,nsv544909 M 17421 0 8 SAMD11 dgv12n54 1 859306 860173 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544917,nsv544910,nsv544911,nsv544922,nsv544927,nsv544921,nsv544926 M 17421 99 267 SAMD11 dgv13n54 1 859306 860508 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544912,nsv544923 M 17421 6 24 SAMD11 dgv14n54 1 859306 863421 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544929,nsv544918,nsv544913 M 17421 4 0 SAMD11 dgv15n54 1 859306 869180 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544925,nsv544914,nsv544933 M 17421 0 17 SAMD11 esv1732269 1 859334 859446 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4110931 M 2 0 1 SAMD11 HuRef nsv544919 1 859413 859897 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707996,nssv707970,nssv708076,nssv707985,nssv707973,nssv708067,nssv707864,nssv707961,nssv707840,nssv707845,nssv707854,nssv707836,nssv707909,nssv707851,nssv708066,nssv707877,nssv707848,nssv708046,nssv707972,nssv707849,nssv707850,nssv708075,nssv707852,nssv707980,nssv708052,nssv707917,nssv708047,nssv707921,nssv707913,nssv707853,nssv708053,nssv708065,nssv707977,nssv707922,nssv708054,nssv708015,nssv707841,nssv707926,nssv708022,nssv707999,nssv708063,nssv707863,nssv708039,nssv708084,nssv708083,nssv708018,nssv708009,nssv708057,nssv707976,nssv707855,nssv707974,nssv708059,nssv707991,nssv707862,nssv708062,nssv707837,nssv707856,nssv708056,nssv707998,nssv707858,nssv707923,nssv707857,nssv707861,nssv707925,nssv707924,nssv708058,nssv708061,nssv707859,nssv707860,nssv708026,nssv707868,nssv707978,nssv708021,nssv707997,nssv708041,nssv708051,nssv708032,nssv708001,nssv707846,nssv707964,nssv707931,nssv708068,nssv707958,nssv707847,nssv707957,nssv708000,nssv708074,nssv707975,nssv708042,nssv707876,nssv708025,nssv707967,nssv708035,nssv707865,nssv708085,nssv707839,nssv707866,nssv707916,nssv707867,nssv708040,nssv707927,nssv708031,nssv707990,nssv708086,nssv708072,nssv707932,nssv707838,nssv708019,nssv708005,nssv707911,nssv708008,nssv707930,nssv707915,nssv707912,nssv708033,nssv707989,nssv708087,nssv708073,nssv707874,nssv707910,nssv707869,nssv708071,nssv707870,nssv707875,nssv707979,nssv708070,nssv707928,nssv707872,nssv707929,nssv707871,nssv707873,nssv708028,nssv707882,nssv708044,nssv707823,nssv708007,nssv708082,nssv708088,nssv707817,nssv707880,nssv708064,nssv707933,nssv707842,nssv707844,nssv707908,nssv707893,nssv707993,nssv707878,nssv707879,nssv707881,nssv707905,nssv707987,nssv708037,nssv708080,nssv707968,nssv708010,nssv707971,nssv707962,nssv707956,nssv707920,nssv707914,nssv708017,nssv708024,nssv707883,nssv707886,nssv708016,nssv707822,nssv707988,nssv707981,nssv708078,nssv707819,nssv708027,nssv707818,nssv707906,nssv707885,nssv708014,nssv707963,nssv708043,nssv708055,nssv708030,nssv707982,nssv707969,nssv707884,nssv708077,nssv708036,nssv708050,nssv707892,nssv707888,nssv708069,nssv708023,nssv707821,nssv707887,nssv708079,nssv707960,nssv707992,nssv707937,nssv707936,nssv707891,nssv707889,nssv707934,nssv707935,nssv707890,nssv707820,nssv707834,nssv707995,nssv708034,nssv707835,nssv708002,nssv708011,nssv708048,nssv707904,nssv707965,nssv707959,nssv708029,nssv708006,nssv707902,nssv708045,nssv708081,nssv707919,nssv707983,nssv707824,nssv707825,nssv707939,nssv707940,nssv707955,nssv708060,nssv707938,nssv707843,nssv707899,nssv707966,nssv707900,nssv708089,nssv708004,nssv707829,nssv707828,nssv707827,nssv707894,nssv707942,nssv708092,nssv708091,nssv708090,nssv707943,nssv707895,nssv707896,nssv708093,nssv707826,nssv707898,nssv707897,nssv707941,nssv708094,nssv708020,nssv707901,nssv708049,nssv707830,nssv708038,nssv707994,nssv708003,nssv707945,nssv707944,nssv707986,nssv707918,nssv707954,nssv707832,nssv708013,nssv707907,nssv707833,nssv708012,nssv707831,nssv707947,nssv707984,nssv707946,nssv707952,nssv707950,nssv707948,nssv707949,nssv707903,nssv707953,nssv707951 M 17421 0 278 SAMD11 nsv544924 1 859413 863421 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708370,nssv708369,nssv708372,nssv708371,nssv708368,nssv708373 M 17421 1 5 SAMD11 esv1062785 1 859459 860187 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4275138 M 2 0 1 SAMD11 HuRef nsv544928 1 859466 860508 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708410 M 17421 1 0 SAMD11 nsv544930 1 859672 860173 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708426,nssv708432,nssv708412,nssv708434,nssv708431,nssv708422,nssv708416,nssv708427,nssv708439,nssv708436,nssv708429,nssv708424,nssv708440,nssv708435,nssv708441,nssv708438,nssv708433,nssv708425,nssv708413,nssv708419,nssv708417,nssv708418,nssv708415,nssv708420,nssv708437,nssv708430,nssv708414,nssv708423,nssv708421,nssv708428 M 17421 0 30 SAMD11 dgv16n54 1 859672 860508 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544934,nsv544931 M 17421 0 9 SAMD11 nsv544932 1 859672 863421 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708450 M 17421 0 1 SAMD11 esv2066434 1 861356 861730 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4643302 M 1 0 1 SAMD11 NA18507 nsv1013524 1 864753 1087198 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475564 M 29084 1 0 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC254099,NOC2L,PLEKHN1,RNF223,SAMD11 dgv13e59 1 875052 876050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3428898,esv3364706 M 185 2 0 NOC2L NA19239,NA19240 nsv482036 1 885830 890958 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558397 M 1 1 0 KLHL17 KB1 esv1003697 1 889874 889948 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568238 M 3 0 1 KLHL17 HuRef nsv159315 1 890012 890087 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177893 M 24 KLHL17 esv3451859 1 894352 895250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692422 M 185 1 0 PLEKHN1 NA19239 esv1001028 1 900918 903597 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565170 M 3 1 0 C1orf170 HuRef esv1165796 1 902141 903171 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4038215 M 2 0 1 C1orf170 HuRef esv997839 1 918544 920627 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565560 M 3 0 1 "" HuRef nsv159328 1 921528 921593 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177906 M 24 "" esv1776849 1 921643 921643 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3713900 M 2 1 0 "" HuRef nsv159419 1 921844 921974 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177997 M 24 "" nsv827252 1 923968 926370 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436318 M 31 1 0 HES4 NA18542 nsv945741 1 932437 1017862 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749378,nssv1749412,nssv1749365,nssv1749417,nssv1749379,nssv1749390,nssv1749364,nssv1749430,nssv1749377,nssv1749424,nssv1749452,nssv1749463,nssv1749389,nssv1749400,nssv1749367,nssv1749443,nssv1749393,nssv1749408,nssv1749368,nssv1749431,nssv1749451,nssv1749401,nssv1749387,nssv1749426,nssv1749376,nssv1749433,nssv1749453,nssv1749406,nssv1749385,nssv1749418,nssv1749448,nssv1749396,nssv1749384,nssv1749437,nssv1749380,nssv1749410,nssv1749458,nssv1749466,nssv1749455,nssv1749420,nssv1749374,nssv1749460,nssv1749370,nssv1749421,nssv1749456,nssv1749464,nssv1749369,nssv1749459,nssv1749371,nssv1749391,nssv1749366,nssv1749411,nssv1749457,nssv1749439,nssv1749373,nssv1749399,nssv1749454,nssv1749444,nssv1749382,nssv1749467,nssv1749381,nssv1749465,nssv1749397,nssv1749392,nssv1749386,nssv1749423,nssv1749395,nssv1749469,nssv1749447,nssv1749441,nssv1749375,nssv1749440,nssv1749415,nssv1749428,nssv1749414,nssv1749446,nssv1749445,nssv1749409,nssv1749363,nssv1749436,nssv1749435,nssv1749468,nssv1749425,nssv1749404,nssv1749422,nssv1749398,nssv1749429,nssv1749403,nssv1749434,nssv1749413,nssv1749432,nssv1749462,nssv1749388,nssv1749442,nssv1749402,nssv1749419,nssv1749407 M 97 10 0 AGRN,C1orf159,ISG15,RNF223 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv828363 1 934543 938639 CNV gain+loss Park_et_al_2010 20364138 Oligo aCGH nssv1436320,nssv1434856 M 31 1 1 "" NA18542,NA18942 nsv509146 1 935753 1036431 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619759,nssv621080 M 4 2 0 AGRN,C1orf159,ISG15,RNF223 NA10860,NA15510 dgv17n54 1 939471 954301 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544936,nsv544935 M 17421 0 2 AGRN,ISG15 esv29017 1 953522 954343 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19930 M 40 0 6 AGRN NA11931,NA12044,NA12414,NA12749,NA12776,NA19240 esv987912 1 953683 954343 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586137 M 3 0 1 AGRN HuRef esv4415 1 953701 954430 CNV loss Wang_et_al_2008 18987735 Sequencing essv26856 M 1 0 1 AGRN YH nsv544937 1 953727 957451 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708455 M 17421 0 1 AGRN dgv18n54 1 953727 963630 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544943,nsv544939,nsv544938,nsv544942 M 17421 0 15 AGRN dgv19n54 1 953727 970323 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544944,nsv544940 M 17421 0 2 AGRN dgv20n54 1 953829 954301 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544945,nsv544941,nsv544946 M 17421 0 31 AGRN esv6517 1 954623 955442 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28958 M 1 0 0 AGRN dgv14e59 1 954952 956850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3385140,esv3441341 M 185 2 0 AGRN NA19239,NA19240 esv1064309 1 955858 955858 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3670093 M 2 1 0 AGRN HuRef nsv829425 1 981285 983720 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434857 M 31 0 1 AGRN NA18942 nsv1003578 1 993492 1207949 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466373 M 29084 1 0 B3GALT6,C1orf159,FAM132A,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 nsv544947 1 995669 1231947 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708504 M 17421 0 1 ACAP3,B3GALT6,C1orf159,FAM132A,LOC254099,MIR200A,MIR200B,MIR429,MIR6726,RNF223,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 nsv470680 1 995669 1303878 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547649,nssv547648,nssv547650 M 443 0 3 ACAP3,AURKAIP1,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 HGDP00661,HGDP00825,HGDP00978 esv25577 1 1001051 1004691 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14645 M 40 1 11 "" NA11993,NA12489,NA12878,NA18502,NA18511,NA18916,NA19099,NA19108,NA19129,NA19147,NA19190,NA19240 esv998069 1 1001111 1004546 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586245 M 3 1 0 "" HuRef dgv21n54 1 1001141 1004266 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544948,nsv544949 M 17421 0 2 "" nsv544950 1 1002543 1004488 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708508,nssv708507 M 17421 0 2 "" nsv1409 1 1020714 1049928 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4677 M 9 1 0 C1orf159 NA19129 dgv15e59 1 1024152 1025250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3352473,esv3385108 M 185 2 0 C1orf159 NA19238,NA19240 esv1010559 1 1024271 1025066 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586664 M 3 1 0 C1orf159 HuRef esv23529 1 1024271 1025066 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10745 M 40 24 0 C1orf159 NA06985,NA12414,NA12749,NA12776,NA12828,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 nsv544951 1 1024294 1024995 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708510,nssv708513,nssv708509,nssv708512,nssv708511 M 17421 5 0 C1orf159 esv1281251 1 1024878 1024878 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4028372 M 2 1 0 C1orf159 HuRef nsv160439 1 1034078 1034388 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179017 M 24 C1orf159 esv32594 1 1041551 1041689 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv92767,essv96399 M 51 0 2 C1orf159 21944,22371 nsv160193 1 1048777 1048856 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178771 M 24 "" esv3429749 1 1059695 1060122 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652034 M 185 1 0 "" NA19240 esv2630187 1 1062939 1066829 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5357752 M 1 0 1 LOC254099 NA18507 esv26506 1 1064242 1065980 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13049 M 40 17 0 LOC254099 NA11894,NA12287,NA12414,NA12489,NA12749,NA15510,NA18502,NA18508,NA18517,NA18858,NA18861,NA18909,NA19099,NA19129,NA19147,NA19225,NA19257 nsv544953 1 1064387 1065741 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708515 M 17421 0 1 LOC254099 dgv22n54 1 1064387 1065843 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544955,nsv544952 M 17421 2 0 LOC254099 nsv544954 1 1064487 1111657 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708516 M 17421 0 1 LOC254099,MIR200A,MIR200B,MIR429,TTLL10 nsv161017 1 1065770 1065952 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179595 M 24 LOC254099 nsv469848 1 1071325 1247478 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1675926,nssv1672244,nssv1672307,nssv1675327,nssv1673518,nssv1674115,nssv1675455,nssv1675619,nssv1672854,nssv1675776,nssv1675676,nssv1674008,nssv1673798,nssv1676561,nssv1675739,nssv1674135,nssv1672738,nssv1674359,nssv1674154,nssv1672366,nssv1674068,nssv1676085,nssv1676084,nssv1672390,nssv1674285,nssv1672249,nssv1672626,nssv1673131,nssv1672094,nssv1675837,nssv1676397,nssv1672396,nssv1673139,nssv1672102,nssv1676113,nssv1676489,nssv1675128,nssv1673413,nssv1674236,nssv1673733,nssv1674296,nssv1673267,nssv1676596,nssv1674548,nssv1672467,nssv1674019,nssv1673022,nssv1674168,nssv1675375,nssv1673850,nssv1672602,nssv1675092,nssv1674020,nssv1675314,nssv1673400,nssv1673566,nssv1676663,nssv1675446 M 265 58 0 ACAP3,B3GALT6,CPSF3L,FAM132A,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,PUSL1,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 esv2524046 1 1073630 1078667 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5287439 M 1 0 1 "" NA18507 esv2587289 1 1074686 1080803 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5220272 M 1 0 1 "" NA18507 esv2317109 1 1076513 1077044 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4717325 M 1 0 1 "" NA18507 nsv509257 1 1077198 1114713 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619760 M 4 1 0 MIR200A,MIR200B,MIR429,TTLL10 NA10860 nsv544956 1 1096336 1166460 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708518 M 17421 0 1 B3GALT6,SDF4,TNFRSF18,TNFRSF4,TTLL10 nsv829536 1 1102010 1102952 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436321 M 31 1 0 TTLL10 NA18542 esv3335892 1 1109852 1110250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691755 M 185 1 0 TTLL10 NA19238 esv24081 1 1126866 1128146 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14081 M 40 8 0 "" NA18511,NA18523,NA18861,NA18907,NA18909,NA19099,NA19147,NA19190 nsv544957 1 1126989 1127516 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708519 M 17421 0 1 "" esv3341957 1 1127052 1127850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691757 M 185 1 0 "" NA19239 dgv23n54 1 1127303 1127974 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544959,nsv544958 M 17421 2 0 "" nsv544960 1 1129279 1132725 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708522 M 17421 0 1 TNFRSF18 dgv24n54 1 1130298 1138758 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544962,nsv544961 M 17421 0 2 TNFRSF18,TNFRSF4 nsv544963 1 1132188 1139524 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708525 M 17421 0 1 TNFRSF4 esv9332 1 1132366 1133130 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31773 M 1 0 0 "" nsv455661 1 1142494 1201155 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv533179 M 1557 0 1 B3GALT6,FAM132A,SDF4,UBE2J2 1782681247_A nsv544964 1 1142494 1201155 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172577 M 17421 0 1 B3GALT6,FAM132A,SDF4,UBE2J2 1782681247_A nsv544965 1 1142494 1231947 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708526 M 17421 0 1 ACAP3,B3GALT6,FAM132A,MIR6726,SCNN1D,SDF4,UBE2J2 nsv159887 1 1142956 1147823 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178465 M 24 SDF4 nsv821698 1 1154213 1159633 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433403 M 31 1 0 B3GALT6,SDF4 NA18526 esv33767 1 1157979 1158939 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv96403,essv92753,essv95205 M 51 0 3 B3GALT6 21721,21944,22371 esv5277 1 1173061 1173724 CNV loss Wang_et_al_2008 18987735 Sequencing essv27718 M 1 0 1 "" YH esv3337442 1 1174052 1174950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691758 M 185 1 0 "" NA19240 esv1750792 1 1174236 1174500 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3720664 M 2 0 1 "" HuRef nsv817616 1 1182378 1231947 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417737 M 112 0 1 ACAP3,MIR6726,SCNN1D,UBE2J2 NA19003 esv2758912 1 1189183 1309735 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757716 M 270 0 1 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 NA18991 nsv1000169 1 1206921 1287597 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464101 M 29084 1 0 ACAP3,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,SCNN1D,TAS1R3 esv3408806 1 1209294 1209684 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652039 M 185 1 0 SCNN1D NA19240 esv25372 1 1213422 1215557 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20786 M 40 2 14 SCNN1D NA12004,NA12006,NA12044,NA12287,NA12414,NA12878,NA15510,NA18505,NA18508,NA18511,NA18907,NA18909,NA18916,NA19099,NA19129,NA19257 esv2106414 1 1213431 1215612 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4728356 M 1 0 1 SCNN1D NA18507 nsv499366 1 1213443 1215496 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv585600 M 9 1 0 SCNN1D nsv544966 1 1213484 1215422 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708527 M 17421 1 0 SCNN1D esv1004967 1 1213507 1215472 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586753 M 3 1 0 SCNN1D HuRef nsv511671 1 1213721 1215484 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626308 M 1 0 1 SCNN1D 1 esv1653789 1 1213810 1214092 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3908676 M 2 0 1 SCNN1D HuRef esv1027332 1 1214136 1215179 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4148647 M 2 0 1 SCNN1D HuRef esv1323061 1 1215269 1215269 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3960677 M 2 1 0 SCNN1D HuRef dgv25n54 1 1215926 1231609 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544970,nsv544967,nsv544968 M 17421 0 3 ACAP3,MIR6726,SCNN1D nsv544969 1 1215926 1299840 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708530 M 17421 0 1 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,SCNN1D,TAS1R3 nsv160950 1 1218975 1218975 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179528 M 24 ACAP3 nsv544971 1 1219306 1276669 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708532 M 17421 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,PUSL1,TAS1R3 esv3050 1 1222311 1223087 CNV loss Wang_et_al_2008 18987735 Sequencing essv25491 M 1 0 1 ACAP3 YH dgv6n100 1 1226993 1287597 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007042,nsv1006409 M 29084 3 22 ACAP3,CPSF3L,DVL1,GLTPD1,MIR6727,MIR6808,MXRA8,PUSL1,TAS1R3 esv3890636 1 1229798 1278446 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780752 M 3017 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MIR6727,MIR6808,MXRA8,PUSL1,TAS1R3 nsv997291 1 1232078 1301579 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463548 M 29084 1 0 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6727,MIR6808,MXRA8,PUSL1,TAS1R3 dgv7n100 1 1232078 1304300 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998999,nsv1008000 M 29084 0 2 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6727,MIR6808,MXRA8,PUSL1,TAS1R3 nsv1009541 1 1232078 1443453 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696754 M 29084 1 0 ACAP3,ANKRD65,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,MIR6727,MIR6808,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B,VWA1 esv3366182 1 1240852 1241150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691772 M 185 1 0 CPSF3L NA19238 nsv476469 1 1242639 1242639 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019423 M 9 1 0 CPSF3L NA12878 nsv544972 1 1246415 1262979 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708533 M 17421 0 1 CPSF3L,DVL1,GLTPD1,TAS1R3 dgv26n54 1 1246415 1276669 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544975,nsv544973,nsv544974,nsv544976 M 17421 0 4 CPSF3L,DVL1,GLTPD1,MIR6808,TAS1R3 nsv544977 1 1259849 1276990 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708538,nssv708539 M 17421 1 1 DVL1,MIR6808 dgv27n54 1 1262979 1278686 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544978,nsv544979 M 17421 3 0 DVL1,MIR6808,MXRA8 dgv28n54 1 1265940 1285266 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544981,nsv544980 M 17421 2 0 DVL1,MXRA8 dgv29n54 1 1266273 1276990 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544983,nsv544987,nsv544988,nsv544990,nsv544982,nsv544989 M 17421 0 8 DVL1 dgv30n54 1 1266273 1278686 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544986,nsv544985,nsv544984 M 17421 6 0 DVL1,MXRA8 nsv544991 1 1267396 1286016 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708559 M 17421 0 1 DVL1,MXRA8 nsv511672 1 1275043 1276733 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626309 M 1 0 1 "" 1 esv23965 1 1275263 1276763 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19242 M 40 16 0 "" NA06985,NA12239,NA12414,NA15510,NA18502,NA18505,NA18508,NA18517,NA18858,NA18861,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129 esv988609 1 1275263 1276763 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586390 M 3 0 1 "" HuRef dgv31n54 1 1275293 1276310 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544992,nsv544993 M 17421 0 2 "" dgv32n54 1 1275293 1276990 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544995,nsv544994 M 17421 10 5 "" nsv544996 1 1275293 1278686 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708579,nssv708578,nssv708577,nssv708580 M 17421 4 0 MXRA8 nsv544997 1 1275816 1276610 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708581 M 17421 0 1 "" dgv33n54 1 1275872 1279624 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544998,nsv544999 M 17421 0 2 MXRA8 esv9582 1 1291956 1292956 CNV loss Ahn_et_al_2009 19470904 Sequencing essv32023 M 1 0 0 "" esv3820 1 1292241 1292688 CNV loss Wang_et_al_2008 18987735 Sequencing essv26261 M 1 0 1 "" YH esv2540358 1 1307160 1307861 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5193104 M 1 1 0 "" NA18507 esv2758913 1 1314392 2014198 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757717,esv2756832 M 270 6 16 ANKRD65,ATAD3A,ATAD3B,ATAD3C,C1orf233,CALML6,CCNL2,CDK11A,CDK11B,GABRD,GNB1,KIAA1751,LOC148413,MIB2,MMP23A,MMP23B,MRPL20,NADK,PRKCZ,SLC35E2,SLC35E2B,SSU72,TMEM240,TMEM52,TMEM88B,VWA1 NA07056,NA10839,NA12003,NA12006,NA12144,NA12248,NA12740,NA12750,NA12762,NA18504,NA18523,NA18537,NA18632,NA18635,NA18854,NA18940,NA18976,NA18994,NA19144,NA19204,NA19205 nsv1011818 1 1319575 1500664 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696755 M 29084 1 0 ANKRD65,ATAD3A,ATAD3B,ATAD3C,CCNL2,LOC148413,MRPL20,SSU72,TMEM240,TMEM88B,VWA1 nsv545000 1 1346413 1498897 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708584 M 17421 0 1 ANKRD65,ATAD3A,ATAD3B,ATAD3C,SSU72,TMEM240,TMEM88B,VWA1 esv24333 1 1352293 1353399 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10423 M 40 1 0 TMEM88B NA06985 esv3389517 1 1352541 1353522 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652040 M 185 1 0 TMEM88B NA19240 nsv545001 1 1366010 1421661 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708585 M 17421 0 1 ATAD3B,ATAD3C,VWA1 nsv482135 1 1374932 1395401 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558496 M 1 1 0 ATAD3C KB1 dgv34n54 1 1375074 1429557 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545008,nsv545009,nsv545005,nsv545006,nsv545003,nsv545004,nsv545007,nsv545002 M 17421 0 10 ATAD3B,ATAD3C nsv945742 1 1375183 1388543 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750428,nssv1750430,nssv1750488,nssv1750431,nssv1749484,nssv1750420,nssv1750419,nssv1750437,nssv1749478,nssv1750445,nssv1749487,nssv1750432,nssv1749481,nssv1750452,nssv1750417,nssv1750461,nssv1749475,nssv1750446,nssv1750487,nssv1750476,nssv1750425,nssv1750435,nssv1749476,nssv1750455,nssv1750481,nssv1750464,nssv1750421,nssv1750471,nssv1749486,nssv1750493,nssv1749471,nssv1750456,nssv1749485,nssv1750457,nssv1750486,nssv1750458,nssv1749480,nssv1750501,nssv1750483,nssv1750470,nssv1750412,nssv1750453,nssv1749477,nssv1750434,nssv1749479,nssv1750492,nssv1750490,nssv1750442,nssv1750480,nssv1750450,nssv1750416,nssv1750497,nssv1750479,nssv1750443,nssv1750482,nssv1750439,nssv1750414,nssv1750466,nssv1750413,nssv1750460,nssv1750426,nssv1750477,nssv1749474,nssv1750449,nssv1750415,nssv1750475,nssv1750489,nssv1750469,nssv1749482,nssv1750468,nssv1749473,nssv1750463,nssv1750499,nssv1750433,nssv1750474,nssv1750491,nssv1750494,nssv1750465,nssv1750495,nssv1750444,nssv1750478,nssv1750454,nssv1750500,nssv1750448,nssv1750424,nssv1749470,nssv1750472,nssv1750459,nssv1750441,nssv1750447,nssv1750423,nssv1750427,nssv1750422,nssv1750436,nssv1750498,nssv1750467,nssv1750438 M 97 10 0 ATAD3C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv482146 1 1397027 1421444 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558507 M 1 1 0 ATAD3B KB1 nsv945743 1 1401450 1416132 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750594,nssv1750561,nssv1750504,nssv1750546,nssv1750516,nssv1750548,nssv1750526,nssv1750567,nssv1750592,nssv1750555,nssv1750593,nssv1750608,nssv1750510,nssv1750531,nssv1750536,nssv1750581,nssv1750590,nssv1750575,nssv1750513,nssv1750530,nssv1750505,nssv1750535,nssv1750534,nssv1750580,nssv1750533,nssv1750556,nssv1750528,nssv1750541,nssv1750506,nssv1750585,nssv1750514,nssv1750586,nssv1750508,nssv1750547,nssv1750589,nssv1750527,nssv1750503,nssv1750554,nssv1750591,nssv1750563,nssv1750512,nssv1750544,nssv1750520,nssv1750583,nssv1750525,nssv1750552,nssv1750509,nssv1750543,nssv1750519,nssv1750582,nssv1750588,nssv1750538,nssv1750511,nssv1750601,nssv1750524,nssv1750574,nssv1750515,nssv1750502,nssv1750522,nssv1750569,nssv1750521,nssv1750579,nssv1750598,nssv1750571,nssv1750523,nssv1750603,nssv1750597,nssv1750549,nssv1750587,nssv1750609,nssv1750517,nssv1750559,nssv1750565,nssv1750558,nssv1750600,nssv1750564,nssv1750602,nssv1750570,nssv1750604,nssv1750578,nssv1750550,nssv1750566,nssv1750560,nssv1750576,nssv1750537,nssv1750606,nssv1750542,nssv1750553,nssv1750572,nssv1750557,nssv1750545,nssv1750568,nssv1750539,nssv1750599,nssv1750577,nssv1750605,nssv1750532 M 97 10 0 ATAD3B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1254392 1 1403212 1403212 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3989689 M 2 1 0 ATAD3B HuRef esv25832 1 1404772 1406058 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11756 M 40 0 3 ATAD3B NA18511,NA18523,NA18861 nsv545010 1 1404962 1443784 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708596 M 17421 0 1 ATAD3A,ATAD3B nsv945744 1 1422231 1455449 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750702,nssv1750645,nssv1750624,nssv1750659,nssv1750621,nssv1750711,nssv1750623,nssv1750665,nssv1750625,nssv1750710,nssv1750696,nssv1750682,nssv1750634,nssv1750714,nssv1750620,nssv1750657,nssv1750611,nssv1750649,nssv1750697,nssv1750680,nssv1750694,nssv1750647,nssv1750636,nssv1750705,nssv1750698,nssv1750676,nssv1750701,nssv1750663,nssv1750703,nssv1750653,nssv1750615,nssv1750660,nssv1750617,nssv1750715,nssv1750612,nssv1750675,nssv1750613,nssv1750643,nssv1750641,nssv1750638,nssv1750699,nssv1750656,nssv1750626,nssv1750713,nssv1750627,nssv1750664,nssv1750616,nssv1750648,nssv1750614,nssv1750637,nssv1750632,nssv1750693,nssv1750633,nssv1750689,nssv1750622,nssv1750688,nssv1750704,nssv1750654,nssv1750619,nssv1750679,nssv1750642,nssv1750674,nssv1750630,nssv1750670,nssv1750628,nssv1750686,nssv1750700,nssv1750681,nssv1750631,nssv1750709,nssv1750644,nssv1750610,nssv1750650,nssv1750708,nssv1750661,nssv1750652,nssv1750685,nssv1750677,nssv1750669,nssv1750687,nssv1750655,nssv1750635,nssv1750672,nssv1750639,nssv1750692,nssv1750691,nssv1750671,nssv1750716,nssv1750678,nssv1750646,nssv1750690,nssv1750712,nssv1750666,nssv1750658,nssv1750683,nssv1750668,nssv1750667 M 97 10 0 ATAD3A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821809 1 1433831 1437382 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1428013 M 31 1 0 "" AK10 nsv821920 1 1433831 1453689 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440791 M 31 1 0 ATAD3A NA18969 nsv482157 1 1437418 1459927 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558518 M 1 1 0 ATAD3A KB1 esv3418946 1 1462852 1463850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691939 M 185 1 0 TMEM240 NA19239 esv1301718 1 1468970 1468970 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3821253 M 2 1 0 SSU72 HuRef nsv472762 1 1486468 1486468 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015897 M 9 1 0 SSU72 NA18555 esv2760410 1 1490804 1677547 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7028856,essv7028634,essv7029523,essv7027745,essv7029412,essv7014077,essv7029856,essv7017410,essv7030523,essv7010743,essv7027301,essv7029079,essv7029634,essv7025188,essv7027079,essv7028523,essv7011854,essv7027968,essv7021854,essv7028190,essv7028301,essv7030190,essv7016299,essv7027523,essv7028412,essv7019632,essv7015188,essv7022965,essv7029745,essv7027857,essv7009632,essv7012966,essv7029190,essv7026299,essv7030634,essv7029301,essv7030301,essv7027190,essv7018521,essv7029967,essv7030412,essv7028745,essv7028968,essv7020743,essv7030079,essv7024077,essv7028079,essv7027412,essv7027634 M 1109 8 41 C1orf233,CDK11A,CDK11B,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 SW_0020,SW_0058,SW_0060,SW_0061,SW_0062,SW_0072,SW_0086,SW_0119,SW_0120,SW_0144,SW_0187,SW_0198,SW_0200,SW_0589,SW_0639,SW_0648,SW_0760,SW_0773,SW_0789,SW_0805,SW_0818,SW_0831,SW_0856,SW_1083,SW_1086,SW_1103,SW_1120,SW_1139,SW_1147,SW_1149,SW_1156,SW_1189,SW_1243,SW_1262,SW_1289,SW_1302,SW_1335,SW_1366,SW_1372,SW_1396,SW_1404,SW_1414,SW_1428,SW_1436,SW_1448,SW_1455,SW_1459,SW_1483,SW_1485 esv1010850 1 1490872 1490872 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572228 M 3 1 0 SSU72 HuRef dgv8n100 1 1494592 1662451 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011271,nsv1002038 M 29084 0 6 C1orf233,CDK11A,CDK11B,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 esv998174 1 1530713 1531833 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586347 M 3 1 0 "" HuRef esv23829 1 1530793 1531833 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15071 M 40 0 3 "" NA12006,NA12878,NA18916 dgv35n54 1 1530820 1531452 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545012,nsv545011 M 17421 2 0 "" dgv36n54 1 1530820 1531735 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545016,nsv545015,nsv545013,nsv545014 M 17421 5 0 "" nsv545017 1 1540565 1585061 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708604 M 17421 0 1 CDK11B,MIB2,MMP23A,MMP23B,SLC35E2B nsv822031 1 1542495 1543199 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434858 M 31 0 1 MIB2 NA18942 esv27786 1 1557744 1673566 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17198 M 40 1 0 CDK11A,CDK11B,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B NA12828 nsv545018 1 1563724 1609404 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708605 M 17421 0 1 CDK11B,SLC35E2B esv3390461 1 1570952 1573350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691995 M 185 1 0 CDK11B NA12878 esv1336011 1 1574409 1574409 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4160103 M 2 1 0 CDK11B HuRef dgv3n67 1 1575237 1657017 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822253,nsv822142,nsv822364 M 31 3 0 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B NA18542,NA18566,NA18582 nsv947410 1 1578397 1585129 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761730,nssv2760684,nssv2765284,nssv2766296,nssv2758644,nssv2762239,nssv2763764,nssv2764181,nssv2765500,nssv2759096 M 97 9 0 CDK11B,SLC35E2B HGDP00456,HGDP00521,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv37n54 1 1585061 1617847 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545019,nsv545025,nsv545023,nsv545024 M 17421 0 4 CDK11B,SLC35E2B dgv38n54 1 1585061 1634768 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545020,nsv545021 M 17421 3 0 CDK11A,CDK11B,MMP23A,SLC35E2B nsv545022 1 1586883 1605211 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708610 M 17421 0 1 CDK11B,SLC35E2B esv1758309 1 1588294 1588461 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3827771 M 2 0 1 CDK11B,SLC35E2B HuRef nsv545026 1 1592650 1627865 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708614 M 17421 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B nsv945745 1 1593232 1595526 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751673,nssv1751705,nssv1751655,nssv1751690,nssv1751654,nssv1751687,nssv1751676,nssv1751714,nssv1751663,nssv1751671,nssv1751672,nssv1751699,nssv1751728,nssv1751701,nssv1751726,nssv1751718,nssv1751729,nssv1751715,nssv1751666,nssv1751691,nssv1751656,nssv1751704,nssv1749111,nssv1749116,nssv1749113,nssv1751679,nssv1751662,nssv1749117,nssv1749112,nssv1751681,nssv1751647,nssv1751670,nssv1751727,nssv1749118,nssv1751668,nssv1751667,nssv1749109,nssv1751693,nssv1751731,nssv1751700,nssv1751659,nssv1751678,nssv1751651,nssv1751702,nssv1751646,nssv1751710,nssv1751648,nssv1751721,nssv1749110,nssv1751683,nssv1750719,nssv1751709,nssv1751650,nssv1751674,nssv1751657,nssv1751685,nssv1751644,nssv1751684,nssv1751649,nssv1749122,nssv1751652,nssv1751695,nssv1751665,nssv1749115,nssv1751661,nssv1751720,nssv1751660,nssv1751696,nssv1751658,nssv1751722,nssv1751645,nssv1751677,nssv1751716,nssv1751706,nssv1751725,nssv1751688,nssv1749114,nssv1751698,nssv1749123,nssv1751689,nssv1751703,nssv1749121,nssv1751711,nssv1751713,nssv1751682,nssv1750717,nssv1751692,nssv1751724,nssv1751712,nssv1751707,nssv1751669,nssv1751680,nssv1751723,nssv1751717,nssv1749120,nssv1751694,nssv1749119 M 97 10 0 CDK11B,SLC35E2B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv16e59 1 1603152 1603450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3412710,esv3330776 M 185 2 0 CDK11B,SLC35E2B NA19239,NA19240 esv6099 1 1605077 1605264 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28540 M 1 0 0 CDK11B,SLC35E2B nsv545027 1 1609404 1653984 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708615,nssv708616 M 17421 0 2 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B dgv39n54 1 1610720 1643532 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545028,nsv545029 M 17421 0 2 CDK11A,CDK11B,MMP23A,SLC35E2B esv3891747 1 1610720 1672234 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25800672 M 3017 0 1 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B nsv545030 1 1610720 1695996 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708619 M 17421 1 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2,SLC35E2B dgv9n100 1 1617766 1677788 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998152,nsv1007850,nsv1003869 M 29084 0 4 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 nsv1011683 1 1617766 1678052 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471705 M 29084 1 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 nsv1003545 1 1617766 1682181 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477823,nssv3467704 M 29084 1 1 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 esv2764265 1 1617778 1662463 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004884,essv7004885,essv7004895,essv7004883,essv7004897,essv7004905,essv7004904,essv7004909,essv7004907,essv7004899,essv7004891,essv7004894,essv7004893,essv7004880,essv7004912,essv7004901,essv7004892,essv7004896,essv7004882,essv7004881,essv7004886,essv7004888,essv7004898,essv7004908,essv7004910,essv7004902,essv7004906,essv7004903,essv7004890,essv7004887 M 1109 2 27 CDK11A,CDK11B,MMP23A,SLC35E2 RW_0007,RW_0008,RW_0057,RW_0062,RW_0075,RW_0108,RW_0119,RW_0137,RW_0154,RW_0162,RW_0166,RW_0179,RW_0186,RW_0203,RW_0221,RW_0276,RW_0324,RW_0341,RW_0359,RW_0510,RW_0512,RW_0523,RW_0529,RW_0533,RW_0560,RW_0645,RW_0646,RW_0662,RW_0663 nsv442858 1 1617778 1662463 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617358,nssv1617414,nssv1617168,nssv1617558,nssv1617569,nssv1617380,nssv1617625,nssv1617580,nssv1617425,nssv1617491,nssv1617279,nssv1617614,nssv1617536,nssv1617436,nssv1617403,nssv1617469,nssv1617503,nssv1617547,nssv1617525,nssv1617458,nssv1617480,nssv1617447,nssv1617591,nssv1617369,nssv1617636,nssv1617392,nssv1617057,nssv1616946,nssv1617514,nssv1616835,nssv1617602 M 270 6 25 CDK11A,CDK11B,MMP23A,SLC35E2 NA07056,NA10835,NA10839,NA12003,NA12006,NA12144,NA12248,NA12740,NA12750,NA12751,NA12762,NA18504,NA18523,NA18537,NA18552,NA18582,NA18620,NA18632,NA18635,NA18852,NA18854,NA18940,NA18976,NA18994,NA19144,NA19145,NA19200,NA19204,NA19205,NA19207,NA19208 nsv545031 1 1617847 1675900 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708620 M 17421 1 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 nsv436343 1 1619478 1674040 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466028 M 2 0 1 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 NA18505 nsv834091 1 1622658 1801937 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443851 M 95 0 1 CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2 nsv482168 1 1624030 1645651 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558529 M 1 1 0 CDK11A,CDK11B KB1 nsv822475 1 1624860 1670445 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1439447 M 31 1 0 CDK11A,CDK11B,SLC35E2 NA18537 nsv822586 1 1625061 1640673 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1438578 M 31 1 0 CDK11A,CDK11B NA18973 nsv822697 1 1625065 1657017 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422355 M 31 0 1 CDK11A,CDK11B,SLC35E2 NA18552 nsv545032 1 1627865 1653984 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708621,nssv708622,nssv708623,nssv708624 M 17421 0 4 CDK11A,CDK11B,SLC35E2 dgv40n54 1 1627865 1670302 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545034,nsv545033,nsv545037 M 17421 0 5 CDK11A,CDK11B,SLC35E2 dgv41n54 1 1634768 1661642 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545036,nsv545035 M 17421 0 3 CDK11A,CDK11B,SLC35E2 nsv822809 1 1637729 1657017 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431056 M 31 0 1 CDK11A,CDK11B,SLC35E2 AK18 nsv509368 1 1638191 1638191 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623768 M 4 1 0 CDK11A,CDK11B NA18994 nsv436733 1 1638486 1638555 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466139 M 2 1 0 CDK11A,CDK11B NA18505 nsv159838 1 1638886 1638936 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178416 M 24 CDK11A,CDK11B esv988165 1 1638911 1638961 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570116 M 3 0 1 CDK11A,CDK11B HuRef esv1455500 1 1638923 1638974 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4050580 M 2 0 1 CDK11A,CDK11B HuRef nsv160496 1 1638954 1639004 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179074 M 24 CDK11A,CDK11B esv6106 1 1639310 1640649 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28547 M 1 0 0 CDK11A,CDK11B nsv160062 1 1639576 1640537 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178640 M 24 CDK11A,CDK11B nsv160158 1 1640463 1640463 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178736 M 24 CDK11A,CDK11B dgv42n54 1 1648805 1673425 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545039,nsv545038 M 17421 0 2 NADK,SLC35E2 nsv545040 1 1653879 1661642 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708636,nssv708635 M 17421 0 2 SLC35E2 nsv945747 1 1655974 1658447 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750155,nssv1750159,nssv1749156,nssv1749166,nssv1750175,nssv1749163,nssv1750167,nssv1750162,nssv1750171,nssv1749177,nssv1750129,nssv1750163,nssv1750141,nssv1749168,nssv1750137,nssv1749160,nssv1750128,nssv1749159,nssv1750106,nssv1750160,nssv1750152,nssv1749167,nssv1750146,nssv1749161,nssv1750115,nssv1750104,nssv1750135,nssv1749170,nssv1750125,nssv1750165,nssv1750123,nssv1749176,nssv1750145,nssv1749175,nssv1750143,nssv1749178,nssv1750131,nssv1750111,nssv1750110,nssv1749172,nssv1750105,nssv1750161,nssv1750113,nssv1749162,nssv1750156,nssv1750157,nssv1750149,nssv1750164,nssv1749179,nssv1750166,nssv1750120,nssv1749164,nssv1750136,nssv1750109,nssv1750127,nssv1749173,nssv1750122,nssv1749174,nssv1750176,nssv1750158,nssv1750172,nssv1749165,nssv1750139,nssv1749158,nssv1750134,nssv1749169,nssv1750117,nssv1749157,nssv1750153,nssv1749171,nssv1750118,nssv1750108,nssv1750119,nssv1750169,nssv1750150,nssv1750132,nssv1750151,nssv1750114,nssv1750121,nssv1750170,nssv1750154,nssv1750130,nssv1750173,nssv1750142,nssv1750148,nssv1750147,nssv1750174,nssv1750107,nssv1750140,nssv1750116,nssv1750133,nssv1750126,nssv1750144,nssv1750138,nssv1750112,nssv1750168,nssv1750124 M 97 10 0 SLC35E2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3408726 1 1670906 1670927 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863669,essv7863670 M 185 2 0 "" NA11992,NA18522 esv1736683 1 1670927 1670927 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3785632 M 2 1 0 "" HuRef nsv945749 1 1673156 1681726 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750183,nssv1750187,nssv1750179,nssv1750181,nssv1750184,nssv1750185,nssv1750186,nssv1750182,nssv1750178,nssv1750180,nssv1750177 M 97 10 0 NADK HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545041 1 1674332 1701558 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708637 M 17421 0 1 NADK dgv10n100 1 1701274 1805841 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011008,nsv1007257 M 29084 2 0 GNB1,NADK nsv834335 1 1734770 1923265 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443962 M 95 0 1 CALML6,GNB1,KIAA1751,TMEM52 esv2619193 1 1760874 1767320 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5309496 M 1 0 1 GNB1 NA18507 nsv478764 1 1777692 1777692 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015949 M 9 1 0 GNB1 NA18507 nsv10272 1 1810314 1813172 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21432,nssv21437,nssv21422,nssv24607,nssv18097,nssv24617,nssv26884,nssv28044,nssv21440,nssv28535,nssv28034,nssv21425,nssv28930,nssv21434,nssv28028,nssv29276,nssv24619 M 31 17 0 GNB1 NA07029,NA07048,NA10847,NA10863,NA11830,NA12740,NA12872,NA18502,NA18504,NA18517,NA18552,NA18563,NA18572,NA18853,NA19007,NA19144,NA19173 dgv17e59 1 1819252 1820350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3359268,esv3369206 M 185 2 0 "" NA19239,NA19240 nsv10383 1 1836475 1849741 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24603 M 31 1 0 CALML6,TMEM52 NA18502 esv2587332 1 1850375 1850824 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5262341 M 1 1 0 "" NA18507 esv3380384 1 1850479 1850828 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652057 M 185 1 0 "" NA19240 nsv512709 1 1850584 1850724 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625333 M 1 1 0 "" 1 esv6744 1 1856113 1857084 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29185 M 1 0 0 "" esv5421 1 1856164 1857032 CNV loss Wang_et_al_2008 18987735 Sequencing essv27862 M 1 0 1 "" YH esv3385307 1 1859052 1860650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692082 M 185 1 0 "" NA19240 nsv834446 1 1881903 2077734 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444073 M 95 0 1 GABRD,KIAA1751,PRKCZ esv2381744 1 1889056 1889385 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4505691 M 1 0 1 KIAA1751 NA18507 esv3385175 1 1892052 1892850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692084 M 185 1 0 KIAA1751 NA19240 dgv43n54 1 1900231 1901077 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545042,nsv545043 M 17421 0 2 KIAA1751 esv25575 1 1900237 1903790 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13192,esv17032,esv21134 M 40 2 20 KIAA1751 NA06985,NA07037,NA11993,NA12044,NA12156,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18505,NA18517,NA18858,NA18861,NA18916,NA19114,NA19147,NA19190,NA19257 nsv545044 1 1900438 1901179 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708640 M 17421 1 0 KIAA1751 esv994854 1 1902795 1903600 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586225 M 3 0 1 KIAA1751 HuRef esv1576320 1 1903185 1903185 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4312046 M 2 1 0 KIAA1751 HuRef esv1718201 1 1915018 1915018 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4140788 M 2 1 0 KIAA1751 HuRef nsv822920 1 1978127 1980416 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436323 M 31 1 0 PRKCZ NA18542 nsv2520 1 1984593 2010920 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1058 M 9 1 0 PRKCZ NA19240 nsv509479 1 1993610 2098297 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619762,nssv619761 M 4 1 0 PRKCZ NA10860 esv1002714 1 2006889 2006889 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575233 M 3 1 0 PRKCZ HuRef esv1162822 1 2007081 2007081 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3941411 M 2 1 0 PRKCZ HuRef nsv3631 1 2012604 2046812 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7778 M 9 1 0 PRKCZ NA12156 nsv470681 1 2013924 2103425 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547651 M 443 0 1 PRKCZ HGDP00697 esv27078 1 2014403 2017263 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16667 M 40 0 2 PRKCZ NA18508,NA19240 esv4759 1 2027516 2028082 CNV loss Wang_et_al_2008 18987735 Sequencing essv27200 M 1 0 1 PRKCZ YH dgv1e194 1 2027609 2028133 CNV deletion Bentley_et_al_2008 18987734 Sequencing esv2345828,esv1927480 M 1 0 1 PRKCZ NA18507 nsv160060 1 2028171 2028171 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178638 M 24 PRKCZ nsv460616 1 2030796 2079386 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537157 M 1557 0 1 PRKCZ NINDS_69 nsv545045 1 2030796 2079386 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172578 M 17421 0 1 PRKCZ NINDS_69 esv2196740 1 2031279 2031631 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4845456 M 1 0 1 PRKCZ NA18507 nsv834557 1 2038930 2232403 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444962,nssv1445073,nssv1445184,nssv1444406,nssv1444739,nssv1444184,nssv1445295,nssv1444851,nssv1444628,nssv1444517,nssv1444295 M 95 0 11 C1orf86,PRKCZ,SKI esv2492368 1 2042381 2042872 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5343806 M 1 1 0 PRKCZ NA18507 esv3388837 1 2042552 2045750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692102 M 185 1 0 PRKCZ NA19239 esv26913 1 2042821 2045835 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15600,esv18512 M 40 7 20 PRKCZ NA06985,NA07037,NA07045,NA11931,NA12004,NA12006,NA12287,NA12489,NA12828,NA12878,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv821592 1 2042821 2045905 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420402 M 1 0 1 PRKCZ NA10851 dgv44n54 1 2043065 2045233 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545049,nsv545052,nsv545046,nsv545056 M 17421 0 22 PRKCZ dgv45n54 1 2043065 2045498 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545051,nsv545050,nsv545058,nsv545047,nsv545054,nsv545048 M 17421 18 0 PRKCZ esv2505453 1 2043244 2045972 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5233482 M 1 0 1 PRKCZ NA18507 esv4841 1 2043376 2045793 CNV loss Wang_et_al_2008 18987735 Sequencing essv27282 M 1 0 1 PRKCZ YH dgv46n54 1 2043441 2045361 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545060,nsv545053,nsv545057 M 17421 32 16 PRKCZ esv1008133 1 2043483 2045670 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586410 M 3 1 0 PRKCZ HuRef nsv545055 1 2043617 2045110 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708673 M 17421 1 0 PRKCZ dgv47n54 1 2043940 2045361 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545061,nsv545059 M 17421 0 7 PRKCZ esv1138741 1 2044405 2044513 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3618162 M 2 0 1 PRKCZ HuRef nsv545062 1 2044575 2067732 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708737 M 17421 0 1 PRKCZ esv2313378 1 2063576 2063899 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4884634 M 1 0 1 PRKCZ NA18507 esv4294 1 2063591 2063822 CNV loss Wang_et_al_2008 18987735 Sequencing essv26735 M 1 0 1 PRKCZ YH dgv48n54 1 2072349 2172330 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545065,nsv545063 M 17421 0 2 C1orf86,PRKCZ,SKI 1780862101_A nsv461727 1 2072349 2172330 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538084 M 1557 0 1 C1orf86,PRKCZ,SKI 1780862101_A dgv49n54 1 2072349 2211082 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545064,nsv545066 M 17421 0 2 C1orf86,PRKCZ,SKI dgv18e59 1 2075852 2077250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3377460,esv3434245 M 185 2 0 PRKCZ NA19239,NA19240 nsv470682 1 2109693 2300053 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547654,nssv547652,nssv547657,nssv547653,nssv547655 M 443 0 5 C1orf86,LOC100129534,MORN1,SKI HGDP00288,HGDP00313,HGDP00546,HGDP00657,HGDP00978 nsv818111 1 2130121 2146222 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417805 M 112 0 1 C1orf86 NA18853 nsv463949 1 2130121 2184977 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539962 M 1557 0 1 C1orf86,SKI 1780862414_A nsv545067 1 2130121 2184977 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172580 M 17421 0 1 C1orf86,SKI 1780862414_A nsv834668 1 2145626 2314237 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449406,nssv1448295,nssv1445628,nssv1447073,nssv1449295,nssv1448184,nssv1450406,nssv1447184,nssv1446184,nssv1447628,nssv1449183,nssv1450294,nssv1447406,nssv1450183,nssv1446961,nssv1445850,nssv1448628,nssv1449961,nssv1448072,nssv1446073,nssv1448850,nssv1447517,nssv1449850,nssv1450628,nssv1447850,nssv1448739,nssv1450517,nssv1448517,nssv1446406,nssv1449517,nssv1448961,nssv1445739,nssv1445517,nssv1448406,nssv1447295,nssv1446628,nssv1446295,nssv1446517,nssv1450072,nssv1449739,nssv1446850,nssv1449628,nssv1445406,nssv1445962,nssv1447739,nssv1449072,nssv1446739,nssv1447961 M 95 0 48 LOC100129534,MORN1,RER1,SKI esv2648351 1 2148325 2150352 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5208944 M 1 0 1 SKI NA18507 nsv465060 1 2170384 2210509 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540916 M 1557 0 1 SKI HGDP01351 nsv545068 1 2170384 2210509 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172581 M 17421 0 1 SKI HGDP01351 nsv545069 1 2172330 2212443 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708741 M 17421 1 0 SKI nsv528621 1 2188917 2201709 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705251 M 2026 0 1 SKI nsv545070 1 2188917 2221323 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708742 M 17421 0 1 SKI nsv545071 1 2194615 2214696 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708743 M 17421 1 0 SKI esv22780 1 2201920 2204035 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20675 M 40 4 10 SKI NA06985,NA11931,NA11993,NA12006,NA12239,NA12287,NA18508,NA18517,NA18523,NA18909,NA18916,NA19108,NA19240,NA19257 esv1252402 1 2202020 2202233 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3979301 M 2 0 1 SKI HuRef esv1536883 1 2202501 2202588 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3775323 M 2 0 1 SKI HuRef esv1025209 1 2202650 2202865 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4025462 M 2 0 1 SKI HuRef esv1682069 1 2202878 2203136 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4061538 M 2 0 1 SKI HuRef esv1164473 1 2203161 2203247 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3589181 M 2 0 1 SKI HuRef nsv823031 1 2224073 2256165 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426364 M 31 1 0 MORN1,SKI AK6 nsv4742 1 2226024 2272062 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8452,nssv1955,nssv5660,nssv3953,nssv10842 M 9 5 0 LOC100129534,MORN1,SKI NA12156,NA12878,NA18555,NA18956,NA19129 dgv4n67 1 2227388 2231840 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv823586,nsv823142,nsv823253,nsv823475 M 31 4 0 SKI AK12,NA18564,NA18951,NA18969 nsv823364 1 2228155 2230862 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437213 M 31 1 0 SKI NA18949 esv2502867 1 2245558 2248109 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5196708 M 1 0 1 MORN1 NA18507 nsv1003233 1 2270283 2325365 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696757 M 29084 1 0 LOC100129534,MORN1,RER1 nsv520511 1 2297341 2298942 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697462 M 2026 0 1 MORN1 nsv823697 1 2310992 2327218 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426365 M 31 1 0 MORN1,PEX10,RER1 AK6 nsv470684 1 2315869 2837348 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547666,nssv547664,nssv547662,nssv547663,nssv547669,nssv547671,nssv547660,nssv547668,nssv547670,nssv547661,nssv547659,nssv547665,nssv547658 M 443 0 12 FAM213B,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14,TTC34 HGDP00288,HGDP00290,HGDP00302,HGDP00313,HGDP00333,HGDP00546,HGDP00550,HGDP00556,HGDP00657,HGDP00661,HGDP00789,HGDP00978 esv2631918 1 2322112 2323107 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5353074 M 1 1 0 RER1 NA18507 nsv545072 1 2322891 2396747 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708744 M 17421 0 1 PEX10,RER1 dgv1n27 1 2322891 2440254 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466171,nsv467282 M 1557 0 2 PANK4,PEX10,PLCH2,RER1 HGDP00607,HGDP00614 dgv50n54 1 2322891 2440254 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545073,nsv545074 M 17421 0 2 PANK4,PEX10,PLCH2,RER1 HGDP00607,HGDP00614 nsv512710 1 2323086 2323243 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625334 M 1 1 0 RER1 1 nsv823808 1 2324440 2325694 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436324 M 31 1 0 RER1 NA18542 nsv545075 1 2349841 2380064 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708745 M 17421 0 1 "" nsv470685 1 2349841 2440254 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547672 M 443 1 0 PANK4,PLCH2 HGDP00720 nsv545076 1 2349841 2456493 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708746 M 17421 1 0 HES5,PANK4,PLCH2 nsv545077 1 2349841 2543484 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708747 M 17421 1 0 FAM213B,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PLCH2,TNFRSF14 nsv545078 1 2356176 2420917 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172584 M 17421 0 1 PLCH2 HGDP00823 nsv998482 1 2359358 2448659 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479094 M 29084 0 1 PANK4,PLCH2 esv3444937 1 2361603 2362016 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652069 M 185 1 0 "" NA19240 esv988545 1 2361810 2361879 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577413 M 3 0 1 "" HuRef esv1513739 1 2361857 2361857 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4248036 M 2 1 0 "" HuRef esv2758914 1 2366114 2370109 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757718 M 270 0 1 "" NA18508 esv25748 1 2380073 2381162 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12176,esv15167 M 40 0 12 "" NA06985,NA11894,NA12004,NA12239,NA12287,NA18511,NA18858,NA18909,NA18916,NA19129,NA19147,NA19240 nsv545079 1 2380448 2440254 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708748 M 17421 0 1 PANK4,PLCH2 esv989190 1 2383548 2383548 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583245 M 3 1 0 "" HuRef esv1307242 1 2383637 2383637 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3609131 M 2 1 0 "" HuRef nsv545080 1 2385312 2486265 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708749 M 17421 0 1 HES5,LOC100133445,LOC115110,PANK4,PLCH2,TNFRSF14 nsv545081 1 2396747 2436740 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172585 M 17421 0 1 PANK4,PLCH2 HGDP01048 nsv823920 1 2403604 2473701 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440793 M 31 1 0 HES5,LOC115110,PANK4,PLCH2 NA18969 nsv818222 1 2413982 2480088 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417806,nssv1417514 M 112 0 2 HES5,LOC115110,PANK4,PLCH2,TNFRSF14 NA18853,NA18968 nsv7171 1 2433858 2527931 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10864,nssv4052,nssv9287,nssv5743,nssv10880,nssv4140,nssv2141,nssv1241,nssv6533,nssv9849,nssv2047,nssv9802,nssv6621,nssv10990,nssv1153,nssv5821 M 9 0 0 FAM213B,HES5,LOC100133445,LOC115110,MMEL1,PANK4,TNFRSF14 NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv824031 1 2442099 2472957 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426366 M 31 1 0 HES5,LOC115110,PANK4 AK6 esv2583485 1 2443495 2444308 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5387623 M 1 1 0 PANK4 NA18507 esv3402792 1 2444073 2444291 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652074 M 185 1 0 PANK4 NA19240 esv1165961 1 2444115 2444115 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3796592 M 2 1 0 PANK4 HuRef nsv1 1 2446450 2478865 OTHER inversion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv1 M 1 0 0 HES5,LOC115110,PANK4 NA15510 nsv545082 1 2457530 2518542 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708750 M 17421 0 1 FAM213B,LOC100133445,LOC115110,MMEL1,TNFRSF14 esv996586 1 2471782 2490872 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564272 M 3 0 0 LOC100133445,LOC115110,TNFRSF14 HuRef dgv1n50 1 2472748 2489106 OTHER inversion Arlt_et_al_2011 21212237 Sequencing,SNP array nsv513632,nsv513633 M 1 0 0 LOC100133445,LOC115110,TNFRSF14 1 esv2471749 1 2473764 2490238 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5165573 M 1 0 0 LOC100133445,LOC115110,TNFRSF14 NA18507 dgv1n47 1 2474521 2489757 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nsv499113,nsv499569,nsv499637 M 9 0 0 LOC100133445,TNFRSF14 esv1699286 1 2475133 2489144 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4270452 M 2 0 0 LOC100133445,TNFRSF14 HuRef esv3447351 1 2475508 2490470 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808959 M 185 0 0 LOC100133445,TNFRSF14 NA12878 dgv5n67 1 2476434 2478083 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824253,nsv824142 M 31 0 2 "" AK20,NA18972 nsv436691 1 2477117 2490251 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466250 M 2 0 0 LOC100133445,TNFRSF14 NA18505 nsv829648 1 2477440 2562200 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450739 M 95 0 1 FAM213B,LOC100133445,MMEL1,TNFRSF14 nsv824364 1 2480304 2481406 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434859 M 31 0 1 TNFRSF14 NA18942 nsv824475 1 2480963 2481406 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431952 M 31 0 1 TNFRSF14 NA18972 nsv545083 1 2497275 2574398 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708751 M 17421 1 0 FAM213B,MMEL1,TTC34 nsv428399 1 2543838 3142350 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv452575 M 62 1 0 ACTRT2,LINC00982,MIR4251,MMEL1,PRDM16,TTC34 HGDP00450 dgv19e59 1 2551452 2552650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3368203,esv3399585 M 185 2 0 MMEL1 NA19239,NA19240 esv21805 1 2555784 2624042 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12016,esv21190,esv18116,esv12824,esv12744,esv16589 M 40 23 8 TTC34 NA06985,NA07037,NA07045,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510,NA18502,NA18508,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19190,NA19225,NA19240 nsv511152 1 2555862 2556342 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626021 M 1 0 1 "" 1 esv1931226 1 2555889 2556583 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4612274 M 1 0 1 "" NA18507 esv1624207 1 2556377 2556377 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4164733 M 2 1 0 "" HuRef esv994553 1 2562327 2573939 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565426 M 3 1 0 TTC34 HuRef nsv824586 1 2570328 2573301 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1438579 M 31 1 0 TTC34 NA18973 nsv545084 1 2571901 2576163 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708752 M 17421 0 1 TTC34 nsv545085 1 2572200 2576163 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708753 M 17421 1 0 TTC34 nsv161117 1 2572889 2573455 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179695 M 24 TTC34 dgv20e59 1 2572952 2624050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3380852,esv3450152,esv3350831,esv3429744,esv3414646,esv3435510 M 185 6 0 TTC34 NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 dgv1n6 1 2573419 2580949 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv160178,nsv160392 M 24 TTC34 esv1381913 1 2573430 2573430 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4214883 M 2 1 0 TTC34 HuRef nsv820462 1 2573460 2624042 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420513 M 1 1 0 TTC34 NA10851 nsv160953 1 2573560 2574160 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179531 M 24 TTC34 nsv160689 1 2573792 2574393 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179267 M 24 TTC34 esv999533 1 2574087 2574929 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568762 M 3 0 1 TTC34 HuRef nsv159794 1 2574506 2576192 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178372 M 24 TTC34 nsv159997 1 2574735 2574895 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178575 M 24 TTC34 nsv160053 1 2575167 2575167 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178631 M 24 TTC34 esv8624 1 2575495 2619296 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31065 M 1 0 0 TTC34 nsv545086 1 2576163 2603322 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708754 M 17421 0 1 TTC34 dgv51n54 1 2576163 2617327 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545088,nsv545090,nsv545091,nsv545089,nsv545087 M 17421 0 5 TTC34 esv1995006 1 2577543 2599245 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4845344 M 1 0 1 TTC34 NA18507 esv999575 1 2577640 2610115 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575600 M 3 0 1 TTC34 HuRef nsv5853 1 2579130 2604293 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9998,nssv5901 M 9 2 0 TTC34 NA18956,NA19129 esv1159004 1 2583107 2583107 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3785302 M 2 1 0 TTC34 HuRef esv1780740 1 2583565 2583646 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4117042 M 2 0 1 TTC34 HuRef esv1286791 1 2583736 2583816 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3745617 M 2 0 1 TTC34 HuRef esv1001627 1 2583755 2584637 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584427 M 3 0 1 TTC34 HuRef esv1366162 1 2585273 2585353 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3788684 M 2 0 1 TTC34 HuRef esv1701153 1 2585378 2585617 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4138724 M 2 0 1 TTC34 HuRef esv990905 1 2586613 2596446 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573398 M 3 0 1 TTC34 HuRef esv1348726 1 2586686 2586686 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4133439 M 2 1 0 TTC34 HuRef esv992616 1 2586821 2591234 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581681 M 3 0 1 TTC34 HuRef esv1068112 1 2587408 2587408 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3882975 M 2 1 0 TTC34 HuRef esv1134902 1 2588279 2588359 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3644540 M 2 0 1 TTC34 HuRef esv1460747 1 2589318 2589438 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3860280 M 2 0 1 TTC34 HuRef esv1312498 1 2590097 2590337 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4349278 M 2 0 1 TTC34 HuRef esv997173 1 2591229 2591790 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566822 M 3 0 1 TTC34 HuRef esv1162144 1 2592696 2593218 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3966245 M 2 0 1 TTC34 HuRef esv1394797 1 2594300 2594381 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4279125 M 2 0 1 TTC34 HuRef nsv160294 1 2594341 2598916 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178872 M 24 TTC34 esv1779754 1 2595041 2595041 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3803937 M 2 1 0 TTC34 HuRef esv993173 1 2599619 2600180 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584575 M 3 0 1 TTC34 HuRef nsv159383 1 2600428 2606129 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177961 M 24 TTC34 esv989273 1 2601373 2604262 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575900 M 3 0 1 TTC34 HuRef nsv545092 1 2604428 2623158 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708760 M 17421 1 0 TTC34 esv6961 1 2605367 2619135 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29402 M 1 0 0 TTC34 nsv159584 1 2606315 2606675 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178162 M 24 TTC34 nsv6964 1 2606625 2608044 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6711 M 9 1 0 TTC34 NA12156 nsv160877 1 2607837 2613499 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179455 M 24 TTC34 nsv7534 1 2608380 2611159 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4235 M 9 1 0 TTC34 NA12878 nsv160247 1 2610167 2612535 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178825 M 24 TTC34 nsv160029 1 2612675 2618697 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178607 M 24 TTC34 nsv160879 1 2612977 2615742 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179457 M 24 TTC34 nsv159137 1 2613123 2613243 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177715 M 24 TTC34 nsv160272 1 2613789 2622864 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178850 M 24 TTC34 nsv160341 1 2616150 2617033 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178919 M 24 TTC34 nsv545093 1 2616883 2621513 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708761 M 17421 1 0 TTC34 esv6481 1 2619795 2620399 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28922 M 1 0 0 TTC34 esv1095177 1 2622421 2622421 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3698632 M 2 1 0 TTC34 HuRef nsv160000 1 2622651 2622850 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178578 M 24 TTC34 nsv159461 1 2623124 2623966 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178039 M 24 TTC34 esv23086 1 2674115 2684820 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19931,esv10077 M 40 12 2 TTC34 NA07037,NA12287,NA12489,NA18502,NA18508,NA18517,NA18858,NA18861,NA18907,NA18909,NA19099,NA19190,NA19225,NA19240 nsv821258 1 2674115 2684900 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420624 M 1 1 0 TTC34 NA10851 nsv545094 1 2674362 2681125 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708762 M 17421 1 0 TTC34 dgv21e59 1 2675052 2681950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330891,esv3418717,esv3419182,esv3448150,esv3409631,esv3347403 M 185 6 0 TTC34 NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv1006680 1 2679384 2679543 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585900 M 3 0 1 TTC34 HuRef esv1125194 1 2679971 2680937 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4352306 M 2 0 1 TTC34 HuRef dgv11n100 1 2684293 3257197 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010228,nsv1010950 M 29084 2 0 ACTRT2,LINC00982,MIR4251,PRDM16,TTC34 esv3892858 1 2690232 2868226 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788249,essv25788252 M 3017 2 0 TTC34 nsv474526 1 2701425 2701425 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019475 M 9 1 0 "" NA18956 dgv12n100 1 2703187 2857932 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998848,nsv1009684,nsv997701,nsv1004395,nsv1009581 M 29084 9 0 "" esv3363378 1 2726552 2726850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692269 M 185 1 0 "" NA19239 nsv469835 1 2730561 2912411 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1675009 M 265 0 1 "" esv2455629 1 2755817 2756685 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5201421 M 1 1 0 "" NA18507 esv1778376 1 2755889 2755889 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3921204 M 2 1 0 "" HuRef esv2606115 1 2758147 2759611 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5324371 M 1 0 1 "" NA18507 esv1145877 1 2758505 2758505 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4076825 M 2 1 0 "" HuRef nsv455662 1 2759402 2819411 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv533180 M 1557 0 1 "" HGDP00515 nsv545095 1 2759402 2819411 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172586 M 17421 0 1 "" HGDP00515 esv1008548 1 2762644 2765985 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564145 M 3 1 0 "" HuRef nsv1010795 1 2765030 2841098 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472022 M 29084 1 0 "" nsv521946 1 2776953 2778968 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694715 M 2026 0 1 "" dgv22e59 1 2802652 2803950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3335313,esv3450928,esv3390986 M 185 3 0 "" NA19238,NA19239,NA19240 dgv23e59 1 2821852 2823050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3336132,esv3350598 M 185 2 0 "" NA19239,NA19240 nsv159525 1 2827696 2827763 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178103 M 24 "" dgv24e59 1 2850652 2852050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3337021,esv3422535 M 185 2 0 "" NA19239,NA19240 esv1009726 1 2855998 2856144 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577776 M 3 0 1 "" HuRef esv1533261 1 2856232 2856379 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4287368 M 2 0 1 "" HuRef esv2132425 1 2866308 2866755 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4889243 M 1 0 1 "" NA18507 esv3109 1 2866419 2866691 CNV loss Wang_et_al_2008 18987735 Sequencing essv25550 M 1 0 1 "" YH esv993932 1 2866454 2866573 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566726 M 3 0 1 "" HuRef esv1703346 1 2866461 2866581 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3656039 M 2 0 1 "" HuRef nsv470686 1 2879437 2973947 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547673 M 443 0 1 ACTRT2,LINC00982 HGDP00978 esv25503 1 2882654 2884779 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21208 M 40 0 2 "" NA12006,NA18907 nsv545096 1 2882819 2884366 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708763,nssv708764 M 17421 2 0 "" nsv545097 1 2899030 2909082 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708765 M 17421 0 1 "" esv7294 1 2901178 2901894 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29735 M 1 0 0 "" esv4855 1 2901350 2901794 CNV loss Wang_et_al_2008 18987735 Sequencing essv27296 M 1 0 1 "" YH nsv1013792 1 2911720 3298148 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477002 M 29084 1 0 ACTRT2,LINC00982,MIR4251,PRDM16 nsv829759 1 2913009 3000997 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450961,nssv1450850 M 95 0 2 ACTRT2,LINC00982,PRDM16 nsv545098 1 2916239 2995991 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708766 M 17421 0 1 ACTRT2,LINC00982,PRDM16 esv1972331 1 2922693 2923095 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4751842 M 1 0 1 "" NA18507 esv2494725 1 2931995 2932984 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5336919 M 1 1 0 "" NA18507 esv3415692 1 2932052 2933150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692284 M 185 1 0 "" NA19240 nsv1000306 1 2937564 3070800 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465345 M 29084 1 0 LINC00982,MIR4251,PRDM16 nsv160478 1 2949127 2949127 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179056 M 24 "" nsv824697 1 2965717 2984572 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426367 M 31 1 0 LINC00982,PRDM16 AK6 nsv545099 1 2983498 3045736 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172587 M 17421 0 1 MIR4251,PRDM16 1780862275_A esv3363327 1 3043312 3043312 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824118 M 185 1 0 PRDM16 NA12878 nsv457884 1 3052221 3094490 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv534983 M 1557 0 1 PRDM16 HGDP01234 nsv545100 1 3052221 3094490 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172588 M 17421 0 1 PRDM16 HGDP01234 esv3382615 1 3069152 3069850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692291 M 185 1 0 PRDM16 NA19239 esv22935 1 3071567 3072666 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20220 M 40 5 0 PRDM16 NA07037,NA12004,NA12828,NA18523,NA19240 nsv458995 1 3073572 3103540 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv535843 M 1557 0 1 PRDM16 HGDP00814 esv25107 1 3073812 3074747 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12712 M 40 1 0 PRDM16 NA12156 dgv52n54 1 3073840 3076356 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545112,nsv545101 M 17421 0 2 PRDM16 nsv545102 1 3073892 3074679 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708768 M 17421 1 0 PRDM16 dgv53n54 1 3073892 3076324 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545106,nsv545111,nsv545103 M 17421 7 0 PRDM16 dgv54n54 1 3073945 3074576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545108,nsv545107,nsv545104,nsv545109,nsv545118,nsv545115,nsv545114 M 17421 0 16 PRDM16 dgv55n54 1 3073945 3074679 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545119,nsv545105 M 17421 0 5 PRDM16 dgv56n54 1 3073996 3074679 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545110,nsv545116 M 17421 19 15 PRDM16 nsv545113 1 3074047 3074202 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708801 M 17421 0 1 PRDM16 nsv545117 1 3074047 3076324 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708828,nssv708830,nssv708829,nssv708834,nssv708831,nssv708832,nssv708833 M 17421 5 2 PRDM16 esv1279453 1 3074394 3074630 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3971964 M 2 0 1 PRDM16 HuRef esv1001450 1 3087258 3088463 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586288 M 3 0 1 PRDM16 HuRef esv26942 1 3087323 3088663 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18850 M 40 6 0 PRDM16 NA11931,NA12004,NA12006,NA12287,NA12776,NA15510 esv2447933 1 3087770 3087831 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5170486 M 1 0 1 PRDM16 NA18507 nsv160334 1 3087875 3087875 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178912 M 24 PRDM16 nsv545120 1 3101608 3127971 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708840 M 17421 0 1 PRDM16 nsv829870 1 3116665 3245948 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451405,nssv1451183,nssv1451072,nssv1451294 M 95 0 4 PRDM16 esv3384045 1 3120212 3120231 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678397 M 185 1 0 PRDM16 NA19240 nsv527875 1 3134605 3198690 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704374 M 2026 0 1 PRDM16 nsv829981 1 3142452 3323676 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441530,nssv1441630,nssv1441607,nssv1441618,nssv1441563,nssv1441552,nssv1441596,nssv1441541,nssv1441674,nssv1441574,nssv1441641,nssv1441663,nssv1441519,nssv1441652,nssv1441685,nssv1441585 M 95 0 16 PRDM16 esv2639320 1 3166925 3167569 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5229663 M 1 1 0 PRDM16 NA18507 nsv545121 1 3178169 3192981 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708841 M 17421 0 1 PRDM16 dgv6n67 1 3199718 3201188 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824919,nsv824808 M 31 0 2 PRDM16 AK14,NA18552 nsv7645 1 3203967 3239047 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4419 M 9 1 0 PRDM16 NA12878 nsv161030 1 3204425 3204425 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179608 M 24 PRDM16 esv2582992 1 3205073 3207155 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5311128 M 1 0 1 PRDM16 NA18507 esv2000244 1 3205391 3206316 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4511826 M 1 0 1 PRDM16 NA18507 nsv511673 1 3205467 3207548 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626311 M 1 0 1 PRDM16 1 esv1917341 1 3205479 3206076 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4748244 M 1 0 1 PRDM16 NA18507 esv22281 1 3205520 3206970 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11880 M 40 0 11 PRDM16 NA11894,NA12004,NA12006,NA12044,NA12489,NA12878,NA15510,NA18502,NA18511,NA18861,NA19240 nsv545122 1 3205977 3206879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708842 M 17421 0 1 PRDM16 nsv830092 1 3207806 3373233 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441807,nssv1441829,nssv1441840,nssv1441796,nssv1441752,nssv1441741,nssv1441774,nssv1441763,nssv1441729,nssv1441718,nssv1441818,nssv1441696,nssv1441707,nssv1441785 M 95 1 13 ARHGEF16,PRDM16 nsv522146 1 3217048 3218775 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694919 M 2026 0 1 PRDM16 esv998521 1 3232455 3232513 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584219 M 3 0 1 PRDM16 HuRef esv1330141 1 3232469 3232528 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3645168 M 2 0 1 PRDM16 HuRef esv3340545 1 3242252 3244650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692298 M 185 1 0 PRDM16 NA19240 esv3347294 1 3242452 3243750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692299 M 185 1 0 PRDM16 NA19239 nsv526836 1 3248973 3249043 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703193 M 2026 0 1 PRDM16 nsv512711 1 3257926 3257966 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625335 M 1 1 0 PRDM16 1 nsv470687 1 3262923 3669634 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547682,nssv547677,nssv547680,nssv547685,nssv547679,nssv547683,nssv547675,nssv547674,nssv547681,nssv547676,nssv547686,nssv547684 M 443 0 8 ARHGEF16,CCDC27,MEGF6,MIR551A,PRDM16,TP73,TP73-AS1,TPRG1L,WRAP73 HGDP00288,HGDP00298,HGDP00302,HGDP00546,HGDP00550,HGDP00657,HGDP00825,HGDP00978 esv2758915 1 3278798 3538713 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757719 M 270 1 0 ARHGEF16,MEGF6,MIR551A,PRDM16,TPRG1L,WRAP73 NA18943 nsv459950 1 3279589 3290990 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536592 M 1557 0 1 PRDM16 HGDP00788 nsv545123 1 3279589 3290990 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172589 M 17421 0 1 PRDM16 HGDP00788 nsv522900 1 3283525 3284832 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698558 M 2026 0 1 PRDM16 nsv524467 1 3297894 3298358 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700403 M 2026 0 1 PRDM16 dgv1n21 1 3297894 3304456 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv527139,nsv521921 M 2026 2 0 PRDM16 esv3414281 1 3314652 3316750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692300 M 185 1 0 PRDM16 NA19240 esv3347804 1 3315952 3316650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692301 M 185 1 0 PRDM16 NA19239 esv1000452 1 3324255 3329826 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565499 M 3 0 1 PRDM16 HuRef esv4712 1 3339813 3340125 CNV loss Wang_et_al_2008 18987735 Sequencing essv27153 M 1 0 1 PRDM16 YH nsv830203 1 3352798 3514176 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441852,nssv1441863 M 95 0 2 ARHGEF16,MEGF6,MIR551A nsv160351 1 3356879 3356879 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178929 M 24 "" nsv545124 1 3358003 3395156 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708843 M 17421 0 1 ARHGEF16,MEGF6 esv3893545 1 3367302 3418468 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779427 M 3017 0 1 ARHGEF16,MEGF6 nsv475972 1 3370042 3370042 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013178 M 9 1 0 ARHGEF16 NA12878 nsv476024 1 3372915 3372915 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013501 M 9 1 0 ARHGEF16 NA12878 esv1571906 1 3381505 3381565 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4030830 M 2 0 1 ARHGEF16 HuRef nsv299 1 3383352 3419129 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4519,nssv4678,nssv9111 M 9 3 0 ARHGEF16,MEGF6 NA12156,NA12878,NA19129 esv3355688 1 3383523 3383768 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652084 M 185 1 0 ARHGEF16 NA19240 esv3449417 1 3383671 3383732 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808964 M 185 1 0 ARHGEF16 NA12878 nsv1012423 1 3384110 4707369 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696759 M 29084 1 0 AJAP1,ARHGEF16,C1orf174,CCDC27,CEP104,DFFB,LINC01134,LOC284661,LOC728716,LRRC47,MEGF6,MIR551A,SMIM1,TP73,TP73-AS1,TPRG1L,WRAP73 esv3368997 1 3390923 3390923 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825207 M 185 1 0 "" NA19240 dgv7n67 1 3390933 3395522 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825142,nsv825364,nsv825031 M 31 3 0 MEGF6 NA18542,NA18951,NA18973 nsv825253 1 3390933 3395784 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434860 M 31 0 1 MEGF6 NA18942 nsv545125 1 3396867 3447155 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708844 M 17421 0 1 MEGF6 esv3417230 1 3408157 3408735 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808966 M 185 1 0 MEGF6 NA12878 esv3352832 1 3408464 3408552 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652085 M 185 1 0 MEGF6 NA19240 esv1595391 1 3408473 3408473 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3895480 M 2 1 0 MEGF6 HuRef nsv1009360 1 3409995 3530072 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467524 M 29084 1 0 MEGF6,MIR551A nsv818333 1 3431124 3446731 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417807 M 112 0 1 MEGF6 NA18853 nsv10494 1 3435994 3441816 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21444,nssv21442 M 31 0 2 MEGF6 NA18942,NA18975 nsv519082 1 3445617 3446452 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696553 M 2026 1 0 MEGF6 nsv545126 1 3445617 3489106 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708845 M 17421 0 1 MEGF6,MIR551A nsv474159 1 3463249 3463249 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014646 M 9 1 0 MEGF6 NA18507 nsv1004180 1 3464491 3530072 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468122 M 29084 1 0 MEGF6,MIR551A nsv545127 1 3470009 3489106 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708846 M 17421 0 1 MEGF6 nsv818444 1 3476986 3500493 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417551 M 112 0 1 MEGF6 NA18971 esv1003247 1 3485168 3485168 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570647 M 3 1 0 MEGF6 HuRef esv1491138 1 3485189 3485189 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3621012 M 2 1 0 MEGF6 HuRef esv2470115 1 3489252 3492632 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5366115 M 1 0 1 MEGF6 NA18507 esv28730 1 3489592 3490491 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13258 M 40 0 3 MEGF6 NA12489,NA18861,NA18916 esv1062679 1 3489887 3489959 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4165604 M 2 0 1 MEGF6 HuRef esv3413189 1 3491652 3492950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692303 M 185 1 0 MEGF6 NA19240 esv1072885 1 3494306 3494306 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4183764 M 2 1 0 MEGF6 HuRef nsv160325 1 3494307 3494307 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178903 M 24 MEGF6 nsv160986 1 3498049 3498114 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179564 M 24 MEGF6 nsv160621 1 3498071 3498136 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179199 M 24 MEGF6 esv1645766 1 3498280 3498346 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4161797 M 2 0 1 MEGF6 HuRef dgv26e59 1 3510952 3512250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3391335,esv3363109 M 185 2 0 MEGF6 NA19239,NA19240 nsv1001715 1 3534043 3676178 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481065 M 29084 0 1 CCDC27,TP73,TP73-AS1,TPRG1L,WRAP73 nsv545128 1 3536795 3606461 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708847 M 17421 0 1 TP73,WRAP73 nsv410 1 3541511 3573504 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10069 M 9 1 0 TP73,WRAP73 NA18956 esv2247294 1 3546704 3547177 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4665883 M 1 0 1 WRAP73 NA18507 esv2489412 1 3549596 3551258 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5381740 M 1 0 1 WRAP73 NA18507 esv29463 1 3550105 3550815 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11696 M 40 0 1 WRAP73 NA15510 esv1007908 1 3550307 3550816 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571323 M 3 0 1 WRAP73 HuRef nsv830314 1 3567200 3710699 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441985,nssv1441940,nssv1441874,nssv1441974,nssv1441929,nssv1441996,nssv1441918,nssv1441907,nssv1441951,nssv1441896,nssv1441963,nssv1441885 M 95 1 11 CCDC27,LRRC47,SMIM1,TP73,TP73-AS1 esv2758916 1 3574901 3645396 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756833 M 270 1 0 TP73,TP73-AS1 NA10855 nsv460061 1 3586877 3661651 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536686 M 1557 0 1 CCDC27,TP73,TP73-AS1 HGDP00787 nsv545129 1 3586877 3661651 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172590 M 17421 0 1 CCDC27,TP73,TP73-AS1 HGDP00787 dgv27e59 1 3600052 3601450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3382922,esv3432428 M 185 1 0 TP73 NA19240 esv1394802 1 3600206 3600206 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4024850 M 2 1 0 TP73 HuRef esv3378361 1 3600452 3601450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692311 M 185 1 0 TP73 NA19238 esv1032022 1 3600542 3600542 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3640841 M 2 1 0 TP73 HuRef esv1115862 1 3600687 3600687 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4358577 M 2 1 0 TP73 HuRef esv1634361 1 3600759 3601179 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3887450 M 2 0 1 TP73 HuRef dgv13n100 1 3636872 3697740 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004361,nsv1002837 M 29084 2 0 CCDC27,LRRC47,SMIM1,TP73,TP73-AS1 esv994567 1 3641983 3645230 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565096 M 3 0 1 TP73,TP73-AS1 HuRef nsv830425 1 3647313 3748249 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442007 M 95 1 0 CCDC27,CEP104,LRRC47,SMIM1,TP73-AS1 nsv478669 1 3648191 3648191 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012836 M 9 1 0 TP73-AS1 NA18507 esv1678500 1 3704149 3704149 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4118454 M 2 1 0 "" HuRef esv1763700 1 3706801 3706951 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4015442 M 2 0 1 "" HuRef nsv509590 1 3732881 3808916 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623769 M 4 1 0 C1orf174,CEP104,DFFB,LINC01134 NA18994 nsv545130 1 3732992 4243808 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172591 M 17421 1 0 C1orf174,CEP104,DFFB,LINC01134,LOC728716 1780862339_A esv1948239 1 3738731 3739075 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4952306 M 1 0 1 CEP104 NA18507 esv1074506 1 3738857 3738857 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3942170 M 2 1 0 CEP104 HuRef nsv159844 1 3749765 3751122 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178422 M 24 CEP104 nsv479517 1 3772895 3772895 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012022 M 9 0 0 DFFB esv1467252 1 3775096 3775096 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4229403 M 2 1 0 DFFB HuRef nsv480404 1 3775355 3775355 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011405 M 9 0 0 DFFB nsv473755 1 3776976 3776976 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017508 M 9 1 0 DFFB NA12156 nsv479682 1 3777067 3777067 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012592 M 9 0 0 DFFB esv1008825 1 3780687 3780843 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580646 M 3 0 1 DFFB HuRef esv1273516 1 3780687 3780844 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4131794 M 2 0 1 DFFB HuRef esv992605 1 3780687 3780921 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585949 M 3 0 1 DFFB HuRef nsv480762 1 3781065 3781065 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012639 M 9 0 0 DFFB nsv476313 1 3781075 3781075 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014524 M 9 1 0 DFFB NA12878 nsv481045 1 3782862 3782862 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011297 M 9 0 0 DFFB nsv474298 1 3783545 3783545 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020439 M 9 1 0 DFFB NA18507 nsv480565 1 3784272 3784272 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012547 M 9 0 0 DFFB nsv480530 1 3784509 3784509 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014312 M 9 0 0 DFFB nsv474895 1 3784853 3784853 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014698 M 9 1 0 DFFB NA18956 nsv480658 1 3786916 3786916 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012832 M 9 0 0 DFFB nsv472199 1 3786962 3786962 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016248 M 9 1 0 DFFB NA18555 nsv480877 1 3788479 3788479 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015174 M 9 0 0 DFFB nsv480517 1 3789579 3789579 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011682 M 9 0 0 DFFB nsv480775 1 3789828 3789828 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015333 M 9 0 0 DFFB nsv480683 1 3793282 3793282 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014297 M 9 0 0 "" nsv474247 1 3795363 3795363 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015360 M 9 1 0 "" NA18507 nsv474199 1 3796377 3796377 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017129 M 9 1 0 C1orf174 NA18507 esv26417 1 3798297 3799062 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16927 M 40 2 0 C1orf174 NA19099,NA19225 esv1352346 1 3798844 3798936 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4067715 M 2 0 1 C1orf174 HuRef nsv460172 1 3913951 3980640 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536774 M 1557 0 1 "" HGDP00586 nsv545131 1 3913951 3980640 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172592 M 17421 0 1 "" HGDP00586 nsv479376 1 3925149 3925149 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017501 M 9 0 0 "" nsv481575 1 3928206 3928206 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018750 M 9 0 0 "" nsv521 1 3943724 3947893 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1327 M 9 1 0 "" NA19240 esv26736 1 3944616 3945124 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11152 M 40 0 1 "" NA18916 esv3332307 1 3959674 3959857 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652088 M 185 1 0 "" NA19240 esv1003004 1 3959687 3959804 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578431 M 3 0 1 "" HuRef esv1647727 1 3959695 3959813 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3880229 M 2 0 1 "" HuRef nsv159163 1 3959696 3959813 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177741 M 24 "" esv3893656 1 4011047 4028383 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779899 M 3017 0 1 "" nsv545132 1 4017098 4024517 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708848 M 17421 0 1 "" esv3893767 1 4017414 4199587 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785971 M 3017 0 1 "" nsv460283 1 4017414 4199587 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536884 M 1557 0 1 "" HGDP00817 nsv545133 1 4017414 4199587 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172593 M 17421 0 1 "" HGDP00817 nsv520675 1 4020171 4022959 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697551 M 2026 0 1 "" esv21720 1 4023703 4027828 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12064 M 40 0 3 "" NA12749,NA12878,NA19108 nsv545134 1 4023709 4027382 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708849 M 17421 0 1 "" dgv57n54 1 4024015 4028383 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545135,nsv545136 M 17421 2 0 "" esv5203 1 4024404 4024858 CNV loss Wang_et_al_2008 18987735 Sequencing essv27644 M 1 0 1 "" YH nsv511674 1 4025102 4025799 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626312 M 1 0 1 "" 1 esv1280652 1 4025195 4025292 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3810874 M 2 0 1 "" HuRef dgv28e59 1 4025552 4027650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3387532,esv3352978 M 185 2 0 "" NA19239,NA19240 esv5764 1 4025643 4027279 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28205 M 1 0 0 "" esv23365 1 4036853 4038828 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16191,esv13534 M 40 0 13 "" NA12004,NA12006,NA12239,NA12287,NA12489,NA12828,NA18505,NA18858,NA18907,NA18909,NA18916,NA19099,NA19147 esv1000769 1 4037161 4037566 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578155 M 3 0 1 "" HuRef esv1100125 1 4037241 4037647 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3668289 M 2 0 1 "" HuRef nsv821406 1 4037678 4038778 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420735 M 1 1 0 "" NA10851 esv1767486 1 4038421 4038421 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4227901 M 2 1 0 "" HuRef nsv509701 1 4042750 4119760 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619763 M 4 1 0 "" NA10860 esv2637444 1 4054369 4055994 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5194644 M 1 0 1 "" NA18507 esv2259067 1 4054830 4055525 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4563770 M 1 0 1 "" NA18507 esv7346 1 4054855 4055568 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29787 M 1 0 0 "" esv3887 1 4054909 4055444 CNV loss Wang_et_al_2008 18987735 Sequencing essv26328 M 1 0 1 "" YH nsv1011866 1 4090113 4142433 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471886 M 29084 1 0 "" esv1112137 1 4096657 4096657 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4248978 M 2 1 0 "" HuRef esv7714 1 4104300 4104480 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30155 M 1 0 0 "" esv2619231 1 4104535 4104584 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5231288 M 1 0 1 "" NA18507 nsv527177 1 4116722 4126954 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703573 M 2026 0 1 "" nsv830536 1 4139870 4285041 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442018 M 95 1 0 "" nsv830647 1 4177167 4347440 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442029 M 95 1 0 "" nsv1003469 1 4180030 4202021 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466239 M 29084 0 1 "" esv25427 1 4184495 4185865 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14207 M 40 0 1 "" NA19240 esv3390866 1 4188301 4188320 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678401 M 185 1 0 "" NA19240 esv3309075 1 4188309 4188310 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843075,essv7842258,essv7842708 M 185 3 0 "" NA19238,NA19239,NA19240 esv3409348 1 4188310 4188322 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898469,essv8898474,essv8898478,essv8898482,essv8898480,essv8898472,essv8898477,essv8898476,essv8898471,essv8898479,essv8898473,essv8898475 M 185 12 0 "" NA11920,NA12044,NA18489,NA18501,NA18505,NA18517,NA18858,NA18870,NA18912,NA19108,NA19129,NA19190 esv3307842 1 4188314 4188315 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760230,essv7747544,essv7741132,essv7760907,essv7762140,essv7750355,essv7752966,essv7746447,essv7755504,essv7744805,essv7758826,essv7756460,essv7761652,essv7746182,essv7756302 M 185 15 0 "" NA11920,NA12044,NA18489,NA18501,NA18505,NA18517,NA18858,NA18870,NA18912,NA19108,NA19129,NA19190,NA19238,NA19239,NA19240 esv3405644 1 4188326 4188374 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674019,essv8674018,essv8674017 M 185 3 0 "" NA19238,NA19239,NA19240 nsv159648 1 4262904 4262904 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178226 M 24 "" nsv545137 1 4281113 4293302 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708852 M 17421 0 1 "" nsv545138 1 4290149 4292889 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708853 M 17421 0 1 "" esv28339 1 4291441 4304135 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19856,esv17261,esv14362,esv11599,esv17217 M 40 9 24 "" NA06985,NA11894,NA11931,NA12287,NA12414,NA12489,NA12828,NA12878,NA15510,NA18505,NA18511,NA18517,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv545141 1 4292371 4292942 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708866,nssv708869,nssv708868,nssv708873,nssv708867,nssv708872,nssv708871,nssv708865,nssv708870,nssv708861,nssv708874,nssv708864,nssv708862,nssv708863 M 17421 11 3 "" dgv58n54 1 4292371 4292964 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545140,nsv545139,nsv545149,nsv545142 M 17421 0 9 "" dgv59n54 1 4292371 4293302 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545143,nsv545144 M 17421 28 10 "" nsv545145 1 4292371 4295095 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708916,nssv708915,nssv708914 M 17421 0 3 "" nsv511131 1 4292371 4295672 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626587 M 1 0 1 "" 1 dgv60n54 1 4292371 4303638 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545146,nsv545147,nsv545148 M 17421 3 0 "" dgv61n54 1 4292473 4293302 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545151,nsv545150,nsv545152 M 17421 0 4 "" nsv545153 1 4292578 4293302 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708925 M 17421 1 0 "" dgv62n54 1 4292734 4293302 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545154,nsv545155 M 17421 0 8 "" esv2505018 1 4296153 4296861 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5228093 M 1 1 0 "" NA18507 esv1619694 1 4296448 4296448 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3918928 M 2 1 0 "" HuRef nsv545156 1 4303433 4303530 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708934,nssv708935 M 17421 0 2 "" esv275066 1 4320920 4323975 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585519 M 1250 0 1 "" dgv29e59 1 4328752 4329950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3376842,esv3368163 M 185 2 0 "" NA19239,NA19240 nsv830759 1 4347441 4569221 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442051,nssv1442040 M 95 0 2 LOC284661 nsv1008790 1 4353020 4364302 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482262 M 29084 1 0 "" esv3893878 1 4368607 4396116 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797727 M 3017 0 1 LOC284661 esv2213507 1 4380017 4380434 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4764956 M 1 0 1 LOC284661 NA18507 esv1543124 1 4380214 4380276 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4354508 M 2 0 1 LOC284661 HuRef nsv545157 1 4423217 4452662 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708936 M 17421 1 0 "" esv3310012 1 4431913 4431914 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837624,essv7837087 M 185 2 0 "" NA19239,NA19240 esv3436839 1 4431915 4431941 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674025 M 185 1 0 "" NA19239 nsv472740 1 4457810 4457810 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018924 M 9 1 0 "" NA18555 nsv460394 1 4473849 4491976 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536980 M 1557 0 1 "" HGDP01098 esv1006796 1 4495890 4501949 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586737 M 3 0 1 "" HuRef esv21437 1 4497777 4503228 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13444 M 40 0 1 "" NA18861 esv2469165 1 4503150 4504226 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5375102 M 1 1 0 "" NA18507 esv995887 1 4503622 4503622 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569284 M 3 1 0 "" HuRef esv1262838 1 4503642 4503642 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3924372 M 2 1 0 "" HuRef esv2398993 1 4576173 4576682 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4895725 M 1 0 1 "" NA18507 nsv545158 1 4604815 4626946 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708937 M 17421 0 1 AJAP1 esv3330361 1 4606752 4609050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692349 M 185 1 0 "" NA19240 nsv825475 1 4612979 4617295 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433404 M 31 1 0 AJAP1 NA18526 esv1009421 1 4634634 4637986 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565733 M 3 0 1 AJAP1 HuRef nsv460505 1 4637391 4653917 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537066 M 1557 0 1 AJAP1 1780862093_A nsv545159 1 4637391 4653917 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172594 M 17421 0 1 AJAP1 1780862093_A nsv520031 1 4647597 4650890 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701964,nssv683157,nssv660165 M 2026 0 3 AJAP1 nsv521535 1 4647597 4672577 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694458 M 2026 0 1 AJAP1 nsv460617 1 4650890 4686979 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537158 M 1557 0 1 AJAP1 NINDS_66 nsv545160 1 4650890 4686979 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173647 M 17421 0 1 AJAP1 NINDS_66 nsv830870 1 4695246 4881159 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442062 M 95 0 1 AJAP1 esv2651800 1 4700006 4701050 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5191133 M 1 1 0 AJAP1 NA18507 nsv830981 1 4722125 4898111 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442074 M 95 1 0 AJAP1 esv3409614 1 4727518 4727564 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740928 M 185 1 0 AJAP1 NA12878 nsv521327 1 4772431 4774365 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697933 M 2026 0 1 "" nsv632 1 4809273 4813432 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2960 M 9 1 0 "" NA18555 nsv473410 1 4837790 4837790 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018919 M 9 1 0 "" NA19129 dgv14n100 1 4897363 4912215 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006916,nsv998217,nsv1006006 M 29084 5 0 "" esv3310485 1 4899047 4900056 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843542 M 185 1 0 "" NA19240 esv3328269 1 4899419 4899622 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652090 M 185 1 0 "" NA19240 esv3450010 1 4899517 4899633 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808971 M 185 1 0 "" NA12878 esv3382602 1 4906052 4906850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692354 M 185 1 0 "" NA19239 nsv1014919 1 4928064 4955711 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478565 M 29084 0 1 "" esv2764243 1 4928076 4960098 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004914,essv7004913,essv7004916,essv7004915 M 1109 0 4 "" RW_0164,RW_0321,RW_0351,RW_0579 nsv521101 1 4931239 4954210 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682279,nssv687649 M 2026 0 2 "" nsv474096 1 4938157 4938157 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011788 M 9 1 0 "" NA12156 nsv478576 1 4940764 4940764 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018520 M 9 1 0 "" NA18507 nsv476165 1 4951473 4951473 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012866 M 9 1 0 "" NA12878 esv2483299 1 4953212 4954328 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5225073 M 1 0 1 "" NA18507 nsv525603 1 4968070 4968815 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701747 M 2026 0 1 "" esv3386646 1 4989900 4989955 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898483 M 185 1 0 "" NA19093 esv3306851 1 4989912 4989913 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7749686 M 185 1 0 "" NA19093 dgv63n54 1 5003897 5070572 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545161,nsv545165,nsv545166 M 17421 4 0 "" nsv1001381 1 5011917 5073865 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472304,nssv3480432,nssv3696762,nssv3479297,nssv3468116,nssv3465441 M 29084 0 6 "" nsv523740 1 5013771 5070572 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699556 M 2026 1 0 "" dgv64n54 1 5013771 5073664 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545163,nsv545162,nsv545167,nsv545164 M 17421 0 7 "" HGDP00529 nsv460839 1 5013771 5073664 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537339 M 1557 0 1 "" HGDP00529 esv3893989 1 5013962 5070572 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25781868,essv25786461 M 3017 0 2 "" esv32797 1 5027130 5068705 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101012 M 51 0 1 "" 21693 esv1109223 1 5035641 5035641 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4201133 M 2 1 0 "" HuRef nsv520723 1 5051105 5064284 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697576 M 2026 1 0 "" esv2532762 1 5071907 5072624 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5197882 M 1 1 0 "" NA18507 esv1289856 1 5072350 5072350 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3630167 M 2 1 0 "" HuRef esv2464561 1 5080714 5080790 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5250667 M 1 0 1 "" NA18507 esv27138 1 5096531 5097274 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13523 M 40 0 1 "" NA19240 esv2465114 1 5120011 5120756 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5290540 M 1 1 0 "" NA18507 esv2918 1 5120121 5120467 CNV loss Wang_et_al_2008 18987735 Sequencing essv25359 M 1 0 1 "" YH nsv999560 1 5178466 5226331 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3462759 M 29084 1 0 "" nsv521242 1 5183802 5186968 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697864 M 2026 0 1 "" nsv545168 1 5183883 5205224 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708948 M 17421 0 1 "" esv2758917 1 5189627 5459265 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757720 M 270 1 0 "" NA19003 esv1963263 1 5205884 5206310 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4703012 M 1 0 1 "" NA18507 nsv460950 1 5230617 5248130 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537425 M 1557 0 1 "" HGDP00998 nsv545169 1 5230617 5248130 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173649 M 17421 0 1 "" HGDP00998 esv34107 1 5267544 5414367 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990691 M 270 0 0 "" nsv1003726 1 5283168 5324969 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466555 M 29084 1 0 "" nsv481312 1 5283810 5283810 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012002 M 9 0 0 "" nsv473792 1 5283811 5283811 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012563 M 9 1 0 "" NA12156 nsv480602 1 5285077 5285077 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017310 M 9 0 0 "" nsv474984 1 5285893 5285893 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018294 M 9 1 0 "" NA18956 nsv477558 1 5287178 5287178 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012506 M 9 1 0 "" NA18517 nsv481266 1 5287713 5287713 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012335 M 9 0 0 "" nsv479925 1 5290728 5290728 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014061 M 9 0 0 "" nsv473968 1 5290904 5290904 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015924 M 9 1 0 "" NA12156 nsv10605 1 5293450 5294873 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24593,nssv28532,nssv29260,nssv21430 M 31 4 0 "" NA07029,NA07048,NA12802,NA18504 nsv479465 1 5294334 5294334 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020534 M 9 0 0 "" nsv479520 1 5296700 5296700 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013929 M 9 0 0 "" nsv474387 1 5296774 5296774 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015116 M 9 1 0 "" NA18956 nsv480617 1 5297300 5297300 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011387 M 9 0 0 "" nsv474375 1 5297574 5297574 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016753 M 9 1 0 "" NA18956 nsv479836 1 5298908 5298908 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019925 M 9 0 0 "" nsv472280 1 5300818 5300818 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019293 M 9 1 0 "" NA18555 nsv481139 1 5302182 5302182 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013782 M 9 0 0 "" nsv479964 1 5303207 5303207 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015499 M 9 0 0 "" nsv480009 1 5303403 5303403 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014433 M 9 0 0 "" esv2259894 1 5396616 5397044 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4831068 M 1 0 1 "" NA18507 nsv160607 1 5396755 5396828 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179185 M 24 "" esv1028089 1 5396817 5396892 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4224996 M 2 0 1 "" HuRef nsv10716 1 5397617 5399397 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26903 M 31 1 0 "" NA19221 nsv479240 1 5407928 5407928 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014489 M 9 0 0 "" nsv472893 1 5408060 5408060 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019845 M 9 1 0 "" NA19129 nsv479719 1 5408210 5408210 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018029 M 9 0 0 "" nsv481014 1 5408766 5408766 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012558 M 9 0 0 "" nsv481354 1 5409120 5409120 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019584 M 9 0 0 "" nsv473687 1 5411496 5411496 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010833 M 9 1 0 "" NA19129 nsv477009 1 5412169 5412169 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019418 M 9 1 0 "" NA12878 nsv545170 1 5412454 5463792 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708949 M 17421 0 1 "" nsv481592 1 5413095 5413095 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012018 M 9 0 0 "" nsv479588 1 5414258 5414258 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014470 M 9 0 0 "" nsv480794 1 5415924 5415924 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019522 M 9 0 0 "" nsv831092 1 5415955 5566331 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442085 M 95 1 0 MIR4417 nsv481180 1 5416502 5416502 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018352 M 9 0 0 "" nsv473316 1 5419344 5419344 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014447 M 9 1 0 "" NA19129 nsv479984 1 5420828 5420828 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012502 M 9 0 0 "" nsv480922 1 5421408 5421408 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020124 M 9 0 0 "" nsv475183 1 5423218 5423218 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018681 M 9 1 0 "" NA19240 nsv473909 1 5423527 5423527 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018625 M 9 1 0 "" NA12156 nsv475512 1 5426431 5426431 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011760 M 9 1 0 "" NA19240 esv2607553 1 5482096 5482197 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5236789 M 1 0 1 "" NA18507 nsv478357 1 5527865 5527865 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011835 M 9 1 0 "" NA18507 nsv527712 1 5546270 5548153 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704192 M 2026 0 1 MIR4417 dgv2n21 1 5547116 5548153 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv519513,nsv526005 M 2026 0 4 "" esv1008325 1 5575936 5575936 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577403 M 3 1 0 "" HuRef esv1402936 1 5575937 5575937 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3729262 M 2 1 0 "" HuRef esv2165265 1 5585810 5586177 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4655011 M 1 0 1 "" NA18507 esv2622825 1 5586421 5586481 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5341576 M 1 0 1 "" NA18507 nsv945752 1 5636293 5640712 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750273,nssv1750232,nssv2572210,nssv1750243,nssv2572200,nssv1750231,nssv1750285,nssv1750229,nssv1750281,nssv1750250,nssv1750313,nssv1750300,nssv1750288,nssv1750298,nssv1750309,nssv1750304,nssv2572211,nssv1750222,nssv1750289,nssv1750227,nssv1750267,nssv1750301,nssv1750257,nssv1750228,nssv1750271,nssv1750245,nssv1750279,nssv1750224,nssv1750255,nssv1750226,nssv2572202,nssv1750225,nssv2572212,nssv1750302,nssv1750265,nssv1750249,nssv1750270,nssv1750306,nssv1750296,nssv1750233,nssv1750253,nssv1750242,nssv1750287,nssv1750237,nssv2572205,nssv1750230,nssv2572213,nssv1750252,nssv1750248,nssv1750307,nssv2572209,nssv1750241,nssv1750293,nssv1750303,nssv1750308,nssv1750235,nssv2572198,nssv1750239,nssv2572207,nssv1750234,nssv1750316,nssv1750238,nssv1750247,nssv1750240,nssv1750312,nssv1750305,nssv1750256,nssv1750299,nssv1750315,nssv1750236,nssv1750282,nssv1750223,nssv2572201,nssv1750291,nssv2572199,nssv1750266,nssv1750297,nssv2572204,nssv1750283,nssv1750251,nssv1750269,nssv2572206,nssv1750278,nssv1750311,nssv1750263,nssv1750261,nssv1750286,nssv1750254,nssv1750276,nssv1750292,nssv1750274,nssv2572197,nssv1750268,nssv1750244,nssv1750294,nssv2572208,nssv1750280,nssv1750246,nssv1750221,nssv1750258,nssv1750310,nssv1750260,nssv1750284,nssv1750275,nssv1750277,nssv1750314,nssv1750317,nssv1750272,nssv1750264,nssv1750290,nssv1750295,nssv1750262,nssv2572203,nssv1750259 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3368079 1 5639749 5639749 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740929 M 185 1 0 "" NA12878 dgv30e59 1 5647252 5659750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3345322,esv3346737,esv3391008,esv3335908,esv3435601,esv3335249 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv945753 1 5648402 5659199 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750402,nssv2572221,nssv1750346,nssv1750387,nssv1750403,nssv1750354,nssv1750340,nssv1751338,nssv1750333,nssv1750381,nssv1750327,nssv1750392,nssv1750329,nssv2572217,nssv1750349,nssv1750357,nssv1750328,nssv1750345,nssv1750397,nssv1750406,nssv1750401,nssv1750411,nssv1750339,nssv1750371,nssv1750398,nssv1750369,nssv1750325,nssv1750410,nssv1750342,nssv1750408,nssv1750395,nssv2572230,nssv1750323,nssv1750386,nssv1750322,nssv1750352,nssv1750347,nssv1750362,nssv1750334,nssv2572216,nssv1750396,nssv1750378,nssv1750399,nssv2572219,nssv1750404,nssv1750356,nssv1750321,nssv1750405,nssv1750320,nssv2572231,nssv1750338,nssv1750376,nssv1750326,nssv1750380,nssv1750331,nssv1750359,nssv1750336,nssv1750350,nssv1750330,nssv2572222,nssv1750335,nssv1750372,nssv1750337,nssv1750385,nssv1750319,nssv1750364,nssv1750332,nssv1750368,nssv1750324,nssv1751336,nssv1750400,nssv1750353,nssv2572226,nssv1750390,nssv2572215,nssv1750344,nssv1751337,nssv1750393,nssv1750409,nssv2572229,nssv1750382,nssv2572224,nssv2572214,nssv2572227,nssv1750384,nssv1750367,nssv2572223,nssv1750363,nssv1750348,nssv1750394,nssv1750377,nssv1750355,nssv1750374,nssv1750343,nssv1750366,nssv1750383,nssv1750389,nssv1750360,nssv2572220,nssv2572218,nssv1750391,nssv1750370,nssv1750358,nssv1750318,nssv1750407,nssv1750375,nssv1750361,nssv1750388,nssv2572225,nssv1750379,nssv1750341,nssv1750373,nssv1750351,nssv1750365 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2474640 1 5654415 5657276 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5304912 M 1 1 0 "" NA18507 esv3894100 1 5656600 5692852 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25798932 M 3017 0 1 "" nsv545171 1 5675937 5809727 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708950 M 17421 1 0 "" nsv523099 1 5681359 5687940 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698792 M 2026 1 0 "" nsv521706 1 5713085 5713242 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698329 M 2026 1 0 "" nsv1005415 1 5724660 5743244 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473594 M 29084 0 1 "" esv2165525 1 5726629 5727090 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4933008 M 1 0 1 "" NA18507 nsv470688 1 5733711 5836208 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547687,nssv547688 M 443 0 2 "" HGDP00546,HGDP00550 esv3408840 1 5755345 5755364 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863671,essv7863672 M 185 2 0 "" NA12005,NA18871 nsv508723 1 5759862 5954595 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619764,nssv619765,nssv623770 M 4 2 0 MIR4689,NPHP4 NA10860,NA18994 esv2444036 1 5785240 5785988 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5245268 M 1 1 0 "" NA18507 dgv31e59 1 5790752 5792750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330767,esv3440591,esv3376026 M 185 3 0 "" NA19238,NA19239,NA19240 esv2487333 1 5791947 5792087 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5391968 M 1 0 1 "" NA18507 esv28776 1 5799180 5800681 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16704,esv10860,esv18182 M 40 0 7 "" NA07045,NA12006,NA12489,NA12878,NA18508,NA18523,NA19147 nsv545172 1 5799207 5799873 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708951 M 17421 0 1 "" nsv831203 1 5812677 5950549 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442096,nssv1442107,nssv1442118 M 95 0 3 MIR4689,NPHP4 esv2494780 1 5814791 5815226 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5176671 M 1 1 0 "" NA18507 nsv512712 1 5814902 5815025 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625336 M 1 1 0 "" 1 esv1660216 1 5814954 5814954 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4159802 M 2 1 0 "" HuRef nsv545173 1 5816038 6007940 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708952 M 17421 1 0 KCNAB2,MIR4689,NPHP4 esv2764259 1 5821316 5826545 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004917,essv7004918 M 1109 0 2 "" RW_0235,RW_0272 nsv545174 1 5827305 5954531 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708953 M 17421 0 1 MIR4689,NPHP4 nsv518390 1 5828924 5836208 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695820 M 2026 1 0 "" nsv945754 1 5831636 5833512 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751423,nssv1751364,nssv1751360,nssv1751375,nssv1751424,nssv1751427,nssv1751367,nssv1751390,nssv1751344,nssv1751408,nssv1751370,nssv1751385,nssv1751361,nssv1751395,nssv1751345,nssv1751404,nssv1751417,nssv1751415,nssv1751368,nssv1751372,nssv1751419,nssv1751380,nssv1751348,nssv1751410,nssv1751422,nssv1751398,nssv1751352,nssv1751365,nssv1751342,nssv1751362,nssv1751416,nssv1751401,nssv1751363,nssv1751384,nssv1751420,nssv1751387,nssv1751340,nssv1751377,nssv1751355,nssv1751400,nssv1751354,nssv1751413,nssv1751353,nssv1751373,nssv1751346,nssv1751339,nssv1751343,nssv1751388,nssv1751349,nssv1751405,nssv1751421,nssv1751432,nssv1751347,nssv1751433,nssv1751341,nssv1751409,nssv1751425,nssv1751379,nssv1751357,nssv1751392,nssv1751356,nssv1751383,nssv1751418,nssv1751431,nssv1751351,nssv1751381,nssv1751350,nssv1751393,nssv1751359,nssv1751386,nssv1751358,nssv1751406,nssv1751397,nssv1751366,nssv1751402,nssv1751435,nssv1751369,nssv1751382,nssv1751414,nssv1751426,nssv1751412,nssv1751407,nssv1751378,nssv1751428,nssv1751396,nssv1751391,nssv1751376,nssv1751411,nssv1751374,nssv1751429,nssv1751399,nssv1751430,nssv1751371,nssv1751394,nssv1751403,nssv1751434,nssv1751389 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv825586 1 5856348 5857220 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423942 M 31 0 1 NPHP4 NA18582 esv3303661 1 5856873 5856874 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7787396,essv7835328,essv7797541,essv7806879,essv7803116,essv7804333,essv7776436,essv7816951,essv7811898,essv7833753,essv7819420,essv7821646,essv7804836,essv7779858,essv7795754,essv7771311,essv7802590,essv7812609,essv7777643,essv7791894,essv7800312,essv7789668,essv7772554,essv7770850,essv7783838,essv7790170,essv7790786,essv7800612,essv7824790,essv7812099,essv7835194,essv7816412,essv7816202,essv7805383,essv7779695,essv7815947,essv7791442,essv7823099,essv7778061,essv7786270 M 185 40 0 NPHP4 NA07000,NA07037,NA10847,NA11881,NA11918,NA11919,NA11992,NA11994,NA11995,NA12006,NA12043,NA12045,NA12144,NA12155,NA12156,NA12249,NA12716,NA12761,NA12812,NA12814,NA12815,NA12878,NA12891,NA12892,NA18499,NA18501,NA18502,NA18511,NA18517,NA18519,NA18523,NA18853,NA18858,NA18907,NA18916,NA19108,NA19114,NA19116,NA19137,NA19190 esv3310166 1 5856877 5856878 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841130,essv7840521,essv7839898 M 185 3 0 NPHP4 NA12878,NA12891,NA12892 esv3339145 1 5856880 5856890 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898487,essv8898500,essv8898505,essv8898512,essv8898499,essv8898513,essv8898491,essv8898508,essv8898489,essv8898490,essv8898519,essv8898498,essv8898494,essv8898515,essv8898495,essv8898518,essv8898511,essv8898510,essv8898516,essv8898488,essv8898506,essv8898504,essv8898493,essv8898507,essv8898496,essv8898485,essv8898497,essv8898509,essv8898486,essv8898517,essv8898502,essv8898484,essv8898501 M 185 33 0 NPHP4 NA07000,NA07037,NA10847,NA11881,NA11919,NA11992,NA11994,NA11995,NA12006,NA12043,NA12045,NA12144,NA12155,NA12156,NA12249,NA12716,NA12761,NA18499,NA18501,NA18502,NA18511,NA18517,NA18519,NA18523,NA18853,NA18858,NA18907,NA18916,NA19108,NA19114,NA19116,NA19137,NA19190 esv3427069 1 5856885 5856891 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674044,essv8674045,essv8674041 M 185 3 0 NPHP4 NA12878,NA12891,NA12892 esv2763437 1 5871264 5940978 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7030745 M 1109 0 1 NPHP4 SW_1304 nsv831314 1 5872056 6045644 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442129,nssv1442162,nssv1442140,nssv1442151 M 95 0 4 KCNAB2,NPHP4 nsv1008071 1 5874830 6067125 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696763 M 29084 0 1 KCNAB2,NPHP4 nsv743 1 5884716 5929974 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9178 M 9 0 1 NPHP4 NA12156 nsv545175 1 5930033 5976217 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708954 M 17421 0 1 KCNAB2,NPHP4 nsv506919 1 5958193 5964193 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623262 M 4 0 0 NPHP4 NA18994 esv3395207 1 5959940 5960616 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652093 M 185 1 0 NPHP4 NA19240 esv33437 1 5960156 5960624 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv97100,essv95744,essv94307,essv94480,essv93021,essv92840,essv97813,essv101040,essv101160,essv99200,essv93510,essv92517,essv100607,essv94798 M 51 14 0 NPHP4 21618,21693,21791,21808,21837,21841,21863,21932,21939,22075,22128,22233,22275,22298 esv3373910 1 5960500 5960685 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808973 M 185 1 0 NPHP4 NA12878 nsv520207 1 5965521 5968851 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697281 M 2026 0 1 NPHP4 nsv1008999 1 5978755 6077316 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482459 M 29084 1 0 KCNAB2 esv2470104 1 5987298 5989575 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5382298 M 1 0 1 KCNAB2 NA18507 esv22772 1 5987337 5989520 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17376,esv15196,esv19261 M 40 27 1 KCNAB2 NA06985,NA07037,NA07045,NA11894,NA11993,NA12004,NA12006,NA12156,NA12287,NA12414,NA12749,NA12828,NA12878,NA15510,NA18505,NA18508,NA18511,NA18517,NA18858,NA18861,NA18909,NA18916,NA19099,NA19114,NA19147,NA19190,NA19225,NA19240 dgv65n54 1 5987699 5988401 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545178,nsv545176,nsv545177 M 17421 0 4 KCNAB2 dgv66n54 1 5987699 5988686 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545191,nsv545179,nsv545180 M 17421 3 0 KCNAB2 dgv67n54 1 5987699 5988839 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545181,nsv545182,nsv545183,nsv545193,nsv545192 M 17421 0 6 KCNAB2 nsv545186 1 5987699 5989207 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708970,nssv708971 M 17421 1 1 KCNAB2 dgv68n54 1 5987699 5989223 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545194,nsv545204,nsv545184,nsv545187,nsv545188,nsv545195,nsv545185 M 17421 19 0 KCNAB2 dgv69n54 1 5987859 5988459 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545190,nsv545189 M 17421 2 0 KCNAB2 nsv545196 1 5987859 5990227 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708989,nssv708990 M 17421 0 2 KCNAB2 nsv159264 1 5987880 5988077 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177842 M 24 KCNAB2 dgv70n54 1 5987910 5989223 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545202,nsv545203,nsv545201,nsv545197 M 17421 0 5 KCNAB2 nsv545199 1 5988013 5988634 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708993 M 17421 0 1 KCNAB2 dgv71n54 1 5988013 5988686 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545200,nsv545198 M 17421 2 0 KCNAB2 nsv545205 1 5988226 5988890 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709001 M 17421 1 0 KCNAB2 dgv72n54 1 5988226 5989223 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545207,nsv545211,nsv545206,nsv545209,nsv545208 M 17421 0 6 KCNAB2 nsv545210 1 5988336 5989223 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709008,nssv709007 M 17421 2 0 KCNAB2 esv7234 1 5988378 5989364 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29675 M 1 0 0 KCNAB2 nsv511675 1 5988444 5989387 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626313 M 1 0 1 KCNAB2 1 nsv545212 1 5988517 5989053 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709010 M 17421 0 1 KCNAB2 dgv73n54 1 5988573 5989223 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545213,nsv545215,nsv545216,nsv545220,nsv545214,nsv545221,nsv545219 M 17421 73 40 KCNAB2 nsv545217 1 5988573 5990227 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709089,nssv709090 M 17421 2 0 KCNAB2 dgv74n54 1 5988573 6002965 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545218,nsv545223,nsv545227 M 17421 3 0 KCNAB2 nsv545222 1 5988634 5990227 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709127 M 17421 0 1 KCNAB2 nsv545224 1 5988686 5989207 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709130,nssv709129 M 17421 0 2 KCNAB2 nsv511127 1 5988686 5993457 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626143 M 1 0 1 KCNAB2 1 nsv545225 1 5988737 5989223 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709132,nssv709131,nssv709134,nssv709133 M 17421 4 0 KCNAB2 nsv545226 1 5988890 5989207 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709138,nssv709137,nssv709135,nssv709136 M 17421 0 4 KCNAB2 nsv545228 1 5989053 5989207 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709140 M 17421 0 1 KCNAB2 nsv461283 1 6030964 6106679 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537694 M 1557 0 1 CHD5,KCNAB2 HGDP00491 nsv545229 1 6030964 6106679 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173650 M 17421 0 1 CHD5,KCNAB2 HGDP00491 dgv75n54 1 6063912 6126853 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545230,nsv545231 M 17421 0 2 CHD5,KCNAB2 nsv470689 1 6071709 6156160 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547694,nssv547692,nssv547691,nssv547693 M 443 0 4 CHD5,KCNAB2 HGDP00288,HGDP00323,HGDP00657,HGDP01397 nsv825697 1 6084347 6085127 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431963 M 31 1 0 CHD5 NA18972 nsv545232 1 6086995 6091009 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709143 M 17421 1 0 CHD5 esv21998 1 6089305 6091890 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17786 M 40 1 0 CHD5 NA06985 dgv76n54 1 6089708 6091617 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545234,nsv545233 M 17421 5 0 CHD5 nsv545235 1 6090496 6091682 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709149 M 17421 0 1 CHD5 nsv831425 1 6111938 6247065 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442196,nssv1442173,nssv1442185 M 95 0 3 ACOT7,CHD5,GPR153,HES3,ICMT,LINC00337,RNF207,RPL22 nsv818555 1 6112802 6135457 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417552 M 112 0 1 CHD5 NA18971 nsv854 1 6113852 6158730 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7151 M 9 0 1 CHD5 NA12156 esv3383496 1 6131652 6132950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692396 M 185 1 0 CHD5 NA19239 nsv545236 1 6144562 6245523 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709150 M 17421 0 1 CHD5,GPR153,HES3,ICMT,LINC00337,RNF207,RPL22 nsv945755 1 6168568 6170477 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750827,nssv1750799,nssv1751438,nssv1751436,nssv1751448,nssv1751468,nssv1750828,nssv1750839,nssv1750820,nssv1751472,nssv1751464,nssv1750800,nssv1750823,nssv1750784,nssv1751458,nssv1751475,nssv1750824,nssv1750793,nssv1751455,nssv1750785,nssv1751449,nssv1751471,nssv1751457,nssv1750816,nssv1751441,nssv1750794,nssv1751460,nssv1750807,nssv1751454,nssv1750804,nssv1751442,nssv1750795,nssv1751467,nssv1750811,nssv1751465,nssv1750791,nssv1750822,nssv1750837,nssv1750826,nssv1750835,nssv1751452,nssv1750786,nssv1750821,nssv1750798,nssv1750825,nssv1750802,nssv1751440,nssv1751462,nssv1751447,nssv1750836,nssv1751451,nssv1751469,nssv1750829,nssv1750812,nssv1751443,nssv1751459,nssv1751450,nssv1750833,nssv1751437,nssv1751461,nssv1751444,nssv1750787,nssv1751453,nssv1750830,nssv1751445,nssv1750796,nssv1751439,nssv1750834,nssv1751446,nssv1750838,nssv1751456,nssv1750788,nssv1750789,nssv1751470,nssv1750803,nssv1750819,nssv1751474,nssv1750815,nssv1750792,nssv1750808,nssv1750814,nssv1751473,nssv1750818,nssv1750809,nssv1750805,nssv1750813,nssv1750790,nssv1750797,nssv1751463,nssv1750806,nssv1750831,nssv1750810,nssv1750801,nssv1750832,nssv1750817,nssv1751466,nssv1750783 M 97 10 0 RPL22 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv8n67 1 6203268 6246950 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825919,nsv825808 M 31 2 0 ACOT7,GPR153,HES3,ICMT,LINC00337,RNF207 AK6,NA18969 nsv508825 1 6203922 6269196 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623771 M 4 1 0 ACOT7,GPR153,HES3,ICMT,LINC00337,RNF207 NA18994 nsv545237 1 6223637 6232823 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709151 M 17421 0 1 GPR153,HES3 nsv526371 1 6229842 6289806 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702667 M 2026 0 1 ACOT7,GPR153 nsv545238 1 6231157 6240570 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709152 M 17421 0 1 GPR153 nsv965 1 6235767 6280469 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7223 M 9 0 1 ACOT7,GPR153 NA12156 nsv519253 1 6245523 6252602 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696748 M 2026 0 1 ACOT7 nsv545239 1 6245523 6272462 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709153 M 17421 0 1 ACOT7 esv24092 1 6288906 6291480 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18277 M 40 0 1 ACOT7 NA19240 nsv522013 1 6289806 6379059 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694782 M 2026 0 1 ACOT7 nsv521525 1 6302194 6310371 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698142 M 2026 0 1 ACOT7 nsv1076 1 6307937 6352169 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2226 M 9 0 1 ACOT7 NA18555 nsv477455 1 6324940 6324940 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013155 M 9 1 0 ACOT7 NA18517 nsv1009548 1 6325623 6499999 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696764 M 29084 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 nsv523989 1 6333801 6379059 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699845 M 2026 0 1 ACOT7 nsv545240 1 6333801 6494762 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709154 M 17421 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 nsv545241 1 6360129 6367955 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709155 M 17421 0 1 ACOT7 esv21684 1 6360781 6368422 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12785 M 40 0 1 ACOT7 NA12044 dgv77n54 1 6361955 6368393 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545248,nsv545247,nsv545250,nsv545242,nsv545249,nsv545244,nsv545246,nsv545243,nsv545245 M 17421 0 39 ACOT7 dgv78n54 1 6364480 6368393 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545252,nsv545251 M 17421 0 5 ACOT7 dgv79n54 1 6366865 6368339 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545255,nsv545253,nsv545256,nsv545254 M 17421 0 5 ACOT7 nsv545257 1 6367554 6368393 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709205 M 17421 0 1 ACOT7 dgv2n27 1 6379059 6494762 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv461616,nsv461839,nsv461950,nsv461728 M 1557 0 4 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 1780862021_A,HGDP00814,NINDS_66,NINDS_98 dgv80n54 1 6379059 6494762 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545260,nsv545259,nsv545263,nsv545261,nsv545262,nsv545258 M 17421 0 8 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 1780862021_A,HGDP00814,NINDS_66,NINDS_98 esv29840 1 6381440 6382138 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11459 M 40 0 2 "" NA18517,NA18523 nsv508836 1 6389543 6483676 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619766 M 4 1 0 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 NA10860 esv25412 1 6399215 6444103 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14500 M 40 1 2 ESPN,HES2,MIR4252,TNFRSF25 NA12489,NA18916,NA19147 nsv7880 1 6400615 6594561 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv11789,nssv24605,nssv21438 M 31 1 2 ESPN,HES2,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 NA18517,NA18564,NA19173 nsv482179 1 6407435 6443590 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558540 M 1 1 0 ESPN,MIR4252 KB1 nsv831536 1 6411973 6587990 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442207,nssv1442351,nssv1442307,nssv1442340,nssv1442240,nssv1442296,nssv1442373,nssv1442273,nssv1442284,nssv1442262,nssv1442329,nssv1442362,nssv1442251,nssv1442218,nssv1442229,nssv1442318 M 95 0 16 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 dgv9n67 1 6412513 6447077 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv826030,nsv826142 M 31 2 0 ESPN,MIR4252,TNFRSF25 NA18564,NA18969 nsv470690 1 6416986 6494762 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547695 M 443 1 0 ESPN,PLEKHG5,TNFRSF25 HGDP00553 nsv545264 1 6439766 6475086 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709210 M 17421 0 1 ESPN,PLEKHG5,TNFRSF25 nsv470691 1 6442898 6500352 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547696 M 443 0 1 ESPN,PLEKHG5,TNFRSF25 HGDP00978 nsv462061 1 6446017 6503483 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538332 M 1557 0 1 PLEKHG5,TNFRSF25 HGDP00614 nsv545265 1 6446017 6503483 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173655 M 17421 0 1 PLEKHG5,TNFRSF25 HGDP00614 nsv545266 1 6447088 6453022 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709211 M 17421 0 1 PLEKHG5,TNFRSF25 nsv545267 1 6448911 6486743 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709212 M 17421 0 1 PLEKHG5 nsv1187 1 6470431 6490052 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3152 M 9 1 0 PLEKHG5 NA12878 nsv545268 1 6472963 6560651 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709213 M 17421 0 1 NOL9,PLEKHG5,TAS1R1 nsv473388 1 6481766 6481766 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011403 M 9 1 0 PLEKHG5 NA19129 nsv831647 1 6508456 6570177 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442529,nssv1442473,nssv1442540,nssv1442407,nssv1442418,nssv1442495,nssv1442384,nssv1442462,nssv1442440,nssv1442451,nssv1442429,nssv1442395,nssv1442506,nssv1442518,nssv1442484 M 95 0 15 NOL9,TAS1R1,ZBTB48 nsv545269 1 6529195 6612727 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709214 M 17421 0 1 KLHL21,NOL9,PHF13,TAS1R1,THAP3,ZBTB48 esv1249079 1 6541559 6541559 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4064753 M 2 1 0 TAS1R1 HuRef esv3302807 1 6543126 6552906 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7734013,essv7736227,essv7733376 M 185 3 0 TAS1R1 NA18517,NA18871,NA18945 nsv476608 1 6559733 6559733 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012014 M 9 1 0 TAS1R1 NA12878 nsv472111 1 6571147 6571147 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011064 M 9 1 0 ZBTB48 NA18555 nsv826253 1 6582832 6611290 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426369 M 31 1 0 KLHL21,PHF13,THAP3 AK6 nsv437199 1 6624738 6726334 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467080 M 60 0 1 DNAJC11,LOC100505887 NA19205 nsv1004598 1 6627943 7161250 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470065 M 29084 1 0 CAMTA1,DNAJC11,LOC100505887 nsv945756 1 6648785 6649695 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750849,nssv1750929,nssv1750924,nssv1750879,nssv1750842,nssv1750898,nssv1750922,nssv1750893,nssv1750861,nssv1750896,nssv1750855,nssv1750865,nssv1750854,nssv1750915,nssv1750862,nssv1750910,nssv1750853,nssv1750907,nssv1750925,nssv1750911,nssv1750846,nssv1750914,nssv1750845,nssv1750902,nssv1750871,nssv1750906,nssv1750917,nssv1750840,nssv1750920,nssv1750897,nssv1750923,nssv1750873,nssv1750850,nssv1750936,nssv1750864,nssv1750903,nssv1750847,nssv1750882,nssv1750859,nssv1750881,nssv1750852,nssv1750887,nssv1750921,nssv1750878,nssv1750856,nssv1750875,nssv1750868,nssv1750901,nssv1750844,nssv1750934,nssv1750926,nssv1750877,nssv1750848,nssv1750880,nssv1750919,nssv1750863,nssv1750851,nssv1750894,nssv1750858,nssv1750892,nssv1750860,nssv1750932,nssv1750857,nssv1750867,nssv1750841,nssv1750927,nssv1750843,nssv1750913,nssv1750918,nssv1750866,nssv1750869,nssv1750899,nssv1750905,nssv1750890,nssv1750904,nssv1750930,nssv1750931,nssv1750883,nssv1750891,nssv1750935,nssv1750908,nssv1750889,nssv1750876,nssv1750900,nssv1750888,nssv1750870,nssv1750909,nssv1750912,nssv1750886,nssv1750928,nssv1750872,nssv1750916,nssv1750933,nssv1750895,nssv1750874,nssv1750884,nssv1750885 M 97 10 0 DNAJC11 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2640779 1 6651194 6652460 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5234545 M 1 0 1 DNAJC11 NA18507 esv2237641 1 6651805 6652374 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4834781 M 1 0 1 DNAJC11 NA18507 nsv1298 1 6660795 6681039 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4861 M 9 1 0 DNAJC11 NA19129 nsv525013 1 6679021 6683848 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701050 M 2026 0 1 DNAJC11 esv28409 1 6685213 6686083 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18257 M 40 0 1 "" NA18909 esv28362 1 6710103 6715982 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14015 M 40 1 0 LOC100505887 NA19225 nsv512713 1 6725094 6725389 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625337 M 1 1 0 "" 1 esv1464790 1 6725208 6725208 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3709090 M 2 1 0 "" HuRef esv1979443 1 6781129 6781558 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4873252 M 1 0 1 CAMTA1 NA18507 esv1086035 1 6781239 6781418 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3780745 M 2 0 1 CAMTA1 HuRef esv999225 1 6781243 6781419 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581910 M 3 0 1 CAMTA1 HuRef esv25521 1 6783932 6784505 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20468 M 40 0 1 CAMTA1 NA18909 esv2556451 1 6923003 6923833 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5345164 M 1 1 0 CAMTA1 NA18507 esv3351162 1 6923407 6923626 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652095 M 185 1 0 CAMTA1 NA19240 nsv512714 1 6923530 6923586 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625338 M 1 1 0 CAMTA1 1 esv1590628 1 6923582 6923582 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4106152 M 2 1 0 CAMTA1 HuRef dgv81n54 1 6937031 6946809 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545271,nsv545270,nsv545272 M 17421 3 0 CAMTA1 nsv545273 1 6938696 6945828 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709218 M 17421 0 1 CAMTA1 dgv82n54 1 6943214 6946081 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545275,nsv545274,nsv545276 M 17421 0 3 CAMTA1 esv28688 1 6945255 6946116 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12322 M 40 0 2 CAMTA1 NA12489,NA18517 dgv83n54 1 6945286 6945879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545278,nsv545279,nsv545284,nsv545285 M 17421 0 21 CAMTA1 dgv84n54 1 6945286 6945918 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545286,nsv545277 M 17421 2 0 CAMTA1 dgv85n54 1 6945286 6946081 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545288,nsv545282,nsv545280,nsv545290,nsv545281 M 17421 145 45 CAMTA1 nsv545283 1 6945286 6946809 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709433,nssv709432,nssv709431,nssv709430,nssv709429,nssv709428,nssv709427,nssv709426 M 17421 4 4 CAMTA1 dgv86n54 1 6945337 6946025 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545292,nsv545294,nsv545287 M 17421 0 9 CAMTA1 nsv545289 1 6945337 6946809 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709443,nssv709444 M 17421 0 2 CAMTA1 dgv87n54 1 6945361 6946081 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545291,nsv545295,nsv545293 M 17421 3 0 CAMTA1 nsv545296 1 6945774 6945879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709457 M 17421 0 1 CAMTA1 nsv545297 1 6945774 6946025 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709459,nssv709458 M 17421 0 2 CAMTA1 nsv545298 1 6945879 6946025 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709460 M 17421 0 1 CAMTA1 esv2482000 1 6966217 6967286 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5354983 M 1 1 0 CAMTA1 NA18507 esv988826 1 7000790 7000790 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566621 M 3 1 0 CAMTA1 HuRef nsv519205 1 7012803 7022247 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696693 M 2026 0 1 CAMTA1 esv990496 1 7069978 7082370 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563883 M 3 0 1 CAMTA1 HuRef dgv33e59 1 7085752 7087250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3449661,esv3439401,esv3448182 M 185 3 0 CAMTA1 NA19238,NA19239,NA19240 esv2444029 1 7086693 7086841 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5208770 M 1 0 1 CAMTA1 NA18507 esv1124399 1 7097432 7097873 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4044198 M 2 0 1 CAMTA1 HuRef nsv462394 1 7108912 7154071 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538567 M 1557 0 1 CAMTA1 HGDP00797 nsv545299 1 7108912 7154071 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173656 M 17421 0 1 CAMTA1 HGDP00797 nsv476621 1 7243072 7243072 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013335 M 9 1 0 CAMTA1 NA12878 esv275496 1 7247055 7247995 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586154 M 1250 0 1 CAMTA1 nsv1001550 1 7322991 7374597 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480881 M 29084 1 0 CAMTA1 nsv1410 1 7338213 7362575 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1411 M 9 1 0 CAMTA1 NA19240 nsv527338 1 7405633 7408904 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703764 M 2026 0 1 CAMTA1 esv3363193 1 7408793 7408877 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674084 M 185 1 0 CAMTA1 NA19238 esv3345755 1 7408827 7408846 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593491 M 185 1 0 CAMTA1 NA19141 esv3304817 1 7408828 7408829 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7771632,essv7827924,essv7825960,essv7791741,essv7781222,essv7811156,essv7782120 M 185 7 0 CAMTA1 NA18498,NA18508,NA18871,NA19093,NA19108,NA19141,NA19238 esv3421992 1 7408835 7408851 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898522,essv8898521,essv8898524,essv8898523,essv8898520 M 185 5 0 CAMTA1 NA18498,NA18508,NA18871,NA19093,NA19108 nsv831758 1 7413944 7594260 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442584,nssv1442562,nssv1442551,nssv1442573 M 95 1 3 CAMTA1 nsv522589 1 7430229 7441851 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705976 M 2026 0 1 CAMTA1 nsv518903 1 7435612 7441285 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696361 M 2026 0 1 CAMTA1 esv3394495 1 7462252 7463750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692404 M 185 1 0 CAMTA1 NA19240 nsv526782 1 7469799 7472075 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703134 M 2026 0 1 CAMTA1 esv2647714 1 7475559 7475822 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5309036 M 1 0 1 CAMTA1 NA18507 esv1935214 1 7475977 7476287 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4549214 M 1 0 1 CAMTA1 NA18507 nsv527595 1 7479739 7489999 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704056 M 2026 0 1 CAMTA1 nsv545300 1 7479739 7489999 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709461 M 17421 0 1 CAMTA1 dgv34e59 1 7480052 7483350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3370220,esv3369338 M 185 2 0 CAMTA1 NA19239,NA19240 esv3410484 1 7480852 7483050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692407 M 185 1 0 CAMTA1 NA19238 nsv826364 1 7489022 7490019 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1421439 M 31 1 0 CAMTA1 NA18997 nsv545301 1 7489999 7493658 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709462 M 17421 0 1 CAMTA1 nsv7991 1 7491072 7494340 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26894 M 31 1 0 CAMTA1 NA18860 esv28432 1 7491802 7494108 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12117 M 40 28 1 CAMTA1 NA06985,NA11931,NA12004,NA12006,NA12156,NA12287,NA12414,NA12489,NA12749,NA12828,NA15510,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19147,NA19190,NA19225,NA19240,NA19257 nsv820592 1 7491802 7494188 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420846 M 1 0 1 CAMTA1 NA10851 nsv826475 1 7491802 7494188 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422357,nssv1425484,nssv1426370,nssv1427245,nssv1421440,nssv1438581,nssv1430329,nssv1428015,nssv1440113,nssv1431057,nssv1423943,nssv1424725,nssv1431790 M 31 0 13 CAMTA1 AK10,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18552,NA18564,NA18582,NA18973,NA18997 esv2592830 1 7492204 7494913 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5286155 M 1 0 1 CAMTA1 NA18507 dgv88n54 1 7492401 7493658 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545307,nsv545311,nsv545312,nsv545302,nsv545313 M 17421 0 11 CAMTA1 dgv89n54 1 7492401 7494050 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545310,nsv545306,nsv545303,nsv545316 M 17421 0 91 CAMTA1 esv7233 1 7492401 7494353 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29674 M 1 0 0 CAMTA1 dgv90n54 1 7492401 7494849 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545304,nsv545305 M 17421 0 2 CAMTA1 nsv819302 1 7492405 7494002 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419290 M 2 0 1 CAMTA1 AK1 esv2190574 1 7492498 7494279 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4836092 M 1 0 1 CAMTA1 NA18507 dgv91n54 1 7492563 7493913 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545314,nsv545308,nsv545315,nsv545309 M 17421 0 11 CAMTA1 esv3915 1 7492621 7494271 CNV loss Wang_et_al_2008 18987735 Sequencing essv26356 M 1 0 1 CAMTA1 YH dgv92n54 1 7492663 7494583 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545326,nsv545330,nsv545334,nsv545317,nsv545323,nsv545332 M 17421 0 14 CAMTA1 dgv10n67 1 7492810 7493979 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv826586,nsv826697 M 31 2 0 CAMTA1 NA18968,NA18969 dgv93n54 1 7492819 7493658 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545318,nsv545319 M 17421 0 6 CAMTA1 dgv94n54 1 7492819 7494050 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545331,nsv545325,nsv545322,nsv545324,nsv545329,nsv545328,nsv545321,nsv545320,nsv545327 M 17421 0 36 CAMTA1 nsv545333 1 7493147 7494050 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709639,nssv709638,nssv709637,nssv709636,nssv709635,nssv709632,nssv709633,nssv709634 M 17421 0 8 CAMTA1 nsv545335 1 7493147 7498253 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709642 M 17421 0 1 CAMTA1 nsv826808 1 7493150 7493730 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436326 M 31 1 0 CAMTA1 NA18542 esv2758918 1 7494050 7610646 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756834 M 270 1 0 CAMTA1 NA19152 esv23816 1 7500245 7502465 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15537 M 40 0 1 CAMTA1 NA18916 esv3310514 1 7502014 7503442 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843513 M 185 1 0 CAMTA1 NA19240 nsv512715 1 7502743 7503046 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625339 M 1 1 0 CAMTA1 1 esv3347816 1 7502792 7503003 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652098 M 185 1 0 CAMTA1 NA19240 esv993163 1 7531319 7531545 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579404 M 3 0 1 CAMTA1 HuRef esv1611358 1 7531327 7531554 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3860626 M 2 0 1 CAMTA1 HuRef nsv1011512 1 7545040 7589562 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696765 M 29084 0 1 CAMTA1 dgv35e59 1 7550152 7552750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3352384,esv3413631,esv3418027 M 185 3 0 CAMTA1 NA19238,NA19239,NA19240 esv2764250 1 7553311 7557794 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004919,essv7004920 M 1109 0 2 CAMTA1 RW_0530,RW_0546 nsv520077 1 7560566 7567389 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697212 M 2026 0 1 CAMTA1 dgv36e59 1 7637052 7638550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3418679,esv3350641 M 185 2 0 CAMTA1 NA19239,NA19240 esv8105 1 7637194 7638277 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30546 M 1 0 0 CAMTA1 esv1977744 1 7637619 7637973 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4674847 M 1 0 1 CAMTA1 NA18507 esv28595 1 7685616 7688145 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13845 M 40 1 0 CAMTA1 NA06985 nsv545336 1 7685801 7688041 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709643 M 17421 0 1 CAMTA1 esv3418854 1 7714665 7714676 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863673 M 185 1 0 CAMTA1 NA12005 nsv161033 1 7778984 7787527 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179611 M 24 PER3 esv991458 1 7812574 7812627 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570335 M 3 0 1 PER3 HuRef nsv477904 1 7821296 7821296 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016187 M 9 1 0 PER3 NA18517 esv3451111 1 7839264 7839264 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701371 M 185 1 0 "" NA12878 esv1585189 1 7845636 7845696 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3804508 M 2 0 1 "" HuRef esv9095 1 7847453 7848232 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31536 M 1 0 0 "" esv5046 1 7847521 7848259 CNV loss Wang_et_al_2008 18987735 Sequencing essv27487 M 1 0 1 "" YH nsv160721 1 7847524 7847971 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179299 M 24 "" esv29691 1 7847539 7848144 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10705 M 40 0 4 "" NA12004,NA12749,NA18502,NA18858 nsv821110 1 7847539 7848144 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420957 M 1 0 1 "" NA10851 esv3302892 1 7895782 7896129 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7736127 M 185 1 0 "" NA19093 nsv1521 1 7936826 7970080 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2406 M 9 1 0 PARK7 NA18555 esv2403277 1 7972997 7973356 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4650492 M 1 0 1 "" NA18507 esv6796 1 8009476 8009650 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29237 M 1 0 0 "" nsv945757 1 8039663 8046343 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750944,nssv1750988,nssv1751015,nssv1751009,nssv1751021,nssv1751026,nssv1751019,nssv1750971,nssv1751022,nssv1751013,nssv1750943,nssv1752570,nssv1750966,nssv1750963,nssv1750951,nssv1750967,nssv1750959,nssv1750995,nssv1750950,nssv1752571,nssv1750952,nssv1750973,nssv1750939,nssv1750985,nssv1750968,nssv1750980,nssv1750940,nssv1751004,nssv1751017,nssv1750983,nssv1751020,nssv1750976,nssv1750942,nssv1750970,nssv1750961,nssv1750992,nssv1750948,nssv1751002,nssv1751018,nssv1752568,nssv1750953,nssv1751025,nssv1750941,nssv1750999,nssv1750958,nssv1750990,nssv1750946,nssv1751003,nssv1751016,nssv1750981,nssv1750949,nssv1751011,nssv1750945,nssv1750993,nssv1750947,nssv1752572,nssv1751023,nssv1750937,nssv1750965,nssv1751012,nssv1750955,nssv1751007,nssv1750957,nssv1750986,nssv1750954,nssv1750962,nssv1751014,nssv1751001,nssv1750938,nssv1750998,nssv1750956,nssv1750982,nssv1751000,nssv1750960,nssv1750969,nssv1750994,nssv1752573,nssv1750996,nssv1750975,nssv1750978,nssv1750984,nssv1750991,nssv1752569,nssv1750977,nssv1750974,nssv1751006,nssv1751005,nssv1751010,nssv1751008,nssv1750964,nssv1750989,nssv1751027,nssv1750979,nssv1750997,nssv1751024,nssv1750972,nssv1750987 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1014727 1 8041849 8298500 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478359 M 29084 1 0 "" nsv528132 1 8067881 8069744 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704677 M 2026 0 1 "" esv2764230 1 8095956 8111872 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004937,essv7004924,essv7004928,essv7004926,essv7004932,essv7004925,essv7004935,essv7004931,essv7004939,essv7004927,essv7004921,essv7004938,essv7004930,essv7004929,essv7004934,essv7004940,essv7004923,essv7004936 M 1109 0 18 "" RW_0013,RW_0043,RW_0049,RW_0098,RW_0118,RW_0129,RW_0155,RW_0162,RW_0174,RW_0190,RW_0220,RW_0229,RW_0234,RW_0253,RW_0552,RW_0619,RW_0626,RW_0634 esv25059 1 8105031 8113962 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14504 M 40 0 2 "" NA07045,NA19108 esv2421513 1 8105049 8112441 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5113994,essv5031289,essv5073414,essv5021464,essv5022989,essv5114664,essv5080397,essv5015810,essv5142796,essv5120988,essv5019834,essv5078502,essv5120024,essv5147348,essv5012227,essv5088579,essv5142988,essv5053733,essv5053091,essv5107816,essv5075870,essv5159857,essv5143136,essv5038470,essv5141409,essv5115860,essv5028046,essv5009796,essv5016176,essv5037691,essv5146224,essv5154659,essv5132727,essv5003208,essv5071617,essv5014120,essv5005423,essv5060745,essv5022164 M 1184 0 39 "" NA06997,NA07045,NA18933,NA19035,NA19107,NA19108,NA19109,NA19127,NA19153,NA19154,NA19204,NA19207,NA19213,NA19215,NA19313,NA19318,NA19321,NA19352,NA19373,NA19374,NA19403,NA19437,NA19471,NA19472,NA19664,NA19701,NA19702,NA19704,NA19915,NA20288,NA20297,NA20343,NA20347,NA20363,NA21295,NA21317,NA21424,NA21580,NA21596 nsv442907 1 8105171 8111872 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617691,nssv1617658,nssv1617669,nssv1617702,nssv1617680,nssv1617647 M 270 0 6 "" NA19127,NA19153,NA19154,NA19204,NA19205,NA19207 nsv545337 1 8123277 8133522 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709644 M 17421 1 0 "" esv2763847 1 8124944 8131908 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7031412,essv7030856,essv7031301,essv7031190,essv7031078,essv7030967 M 1109 6 0 "" SW_0568,SW_1045,SW_1057,SW_1111,SW_1127,SW_1166 nsv831870 1 8125994 8276744 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442595,nssv1442641,nssv1442617,nssv1442630,nssv1442652,nssv1442606 M 95 0 6 "" esv22301 1 8126671 8133714 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10444 M 40 3 0 "" NA11931,NA12004,NA12239 dgv95n54 1 8127306 8133661 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545339,nsv545338,nsv545340 M 17421 4 0 "" nsv441679 1 8128717 8131908 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656570,nssv1656573,nssv1656569,nssv1656568,nssv1656575,nssv1656577,nssv1656576,nssv1656574,nssv1656580,nssv1656571,nssv1656579,nssv1656572,nssv1656578 M 270 13 0 "" NA07019,NA07022,NA10854,NA10857,NA11831,NA11840,NA12004,NA12043,NA12146,NA12155,NA12236,NA12239,NA12752 esv23800 1 8139415 8163405 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15760 M 40 1 0 "" NA12156 nsv545341 1 8139674 8148168 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709649 M 17421 1 0 "" nsv545342 1 8139674 8152767 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709650 M 17421 1 0 "" nsv545343 1 8146419 8197871 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709651 M 17421 0 1 "" nsv1632 1 8160996 8206161 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7290 M 9 0 1 "" NA12156 nsv1012977 1 8235169 8467857 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696766 M 29084 0 1 RERE,SLC45A1 esv1547514 1 8259524 8259524 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3685454 M 2 1 0 "" HuRef nsv947411 1 8283342 8295821 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762787 M 97 0 1 "" HGDP00998 nsv1743 1 8300340 8334303 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3033 M 9 1 0 SLC45A1 NA18555 nsv512716 1 8304272 8305144 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625340 M 1 1 0 "" 1 esv2601359 1 8304404 8305201 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5225689 M 1 1 0 "" NA18507 nsv516827 1 8313475 8346097 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv693483,nssv685632,nssv671511,nssv693424,nssv657128,nssv679037,nssv684816,nssv654276,nssv656941 M 2026 0 9 RERE,SLC45A1 esv1250756 1 8314094 8314094 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4006791 M 2 1 0 SLC45A1 HuRef esv2624373 1 8326992 8327926 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5304328 M 1 1 0 "" NA18507 esv1162151 1 8327542 8327542 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4276612 M 2 1 0 "" HuRef nsv545344 1 8338108 8356587 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709652 M 17421 0 1 RERE nsv819494 1 8338735 8344018 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419699 M 2 1 0 RERE AK1 esv990980 1 8358166 8358166 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583268 M 3 1 0 RERE HuRef esv3404682 1 8369205 8369224 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593546,essv9593558,essv9593502,essv9593569,essv9593513,essv9593524,essv9593580,essv9593591,essv9593535 M 185 9 0 RERE NA11931,NA12249,NA12287,NA12812,NA12814,NA12874,NA18970,NA19141,NA19143 nsv524946 1 8378299 8394751 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700963 M 2026 0 1 RERE nsv947412 1 8402161 8404693 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762537 M 97 1 0 RERE HGDP00998 nsv1012632 1 8402737 8806093 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473413 M 29084 1 0 RERE esv3360802 1 8424569 8424588 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593635,essv9593602,essv9593624,essv9593613 M 185 4 0 RERE NA11931,NA12045,NA12287,NA12814 esv3305985 1 8424578 8424579 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768946,essv7766623,essv7767274,essv7764325,essv7769792,essv7769164 M 185 6 0 RERE NA11894,NA11931,NA12045,NA12287,NA12814,NA12874 nsv479019 1 8432570 8432570 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019838 M 9 0 0 RERE esv3441259 1 8450894 8450913 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593646 M 185 1 0 RERE NA11931 esv25533 1 8473045 8474309 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13828,esv11693 M 40 0 4 RERE NA18517,NA18858,NA19129,NA19190 esv3391677 1 8492050 8492050 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740979 M 185 1 0 RERE NA19240 nsv159615 1 8500203 8503822 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178193 M 24 RERE nsv947413 1 8592006 8597044 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765449,nssv2761317,nssv2756775,nssv2757427 M 97 4 0 RERE HGDP00456,HGDP00778,HGDP00927,HGDP01029 nsv826919 1 8593977 8596557 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423363 M 31 1 0 RERE NA18968 esv26500 1 8594205 8608321 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17365,esv13894,esv15623,esv10195 M 40 2 28 RERE NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12776,NA12828,NA12878,NA15510,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19108,NA19129,NA19147,NA19225,NA19240 nsv945758 1 8597044 8599016 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752582,nssv1752574,nssv1752579,nssv1752581,nssv1752575,nssv1752576,nssv1752580,nssv1752583,nssv1752578,nssv1752577 M 97 10 0 RERE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv827030 1 8597147 8607597 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1435647 M 31 0 1 RERE NA18566 esv2407042 1 8628533 8628957 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4792099 M 1 0 1 RERE NA18507 esv27511 1 8637775 8642826 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17675 M 40 2 0 RERE NA15510,NA18861 nsv827141 1 8638338 8642367 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423374 M 31 1 0 RERE NA18968 esv2384996 1 8651416 8651857 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4771378 M 1 0 1 RERE NA18507 esv25426 1 8689030 8697499 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17965 M 40 0 1 RERE NA18508 nsv1006756 1 8694027 8731636 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469495 M 29084 1 0 RERE nsv945760 1 8731562 8734291 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752628,nssv1752585,nssv1752623,nssv1752600,nssv1752652,nssv1752587,nssv1752636,nssv1752591,nssv1752611,nssv1752669,nssv1752634,nssv1752668,nssv1752635,nssv1752586,nssv1752632,nssv1752593,nssv1752654,nssv1752603,nssv1752618,nssv1752604,nssv1752646,nssv1752664,nssv1752656,nssv1752598,nssv1752626,nssv1752615,nssv1752642,nssv1752661,nssv1752672,nssv1752595,nssv1752640,nssv1752662,nssv1752633,nssv1752612,nssv1752638,nssv1752590,nssv1752647,nssv1752605,nssv1752648,nssv1752594,nssv1752644,nssv1752606,nssv1752607,nssv1752613,nssv1752649,nssv1752665,nssv1752629,nssv1752608,nssv1752620,nssv1752597,nssv1752637,nssv1752596,nssv1752614,nssv1752599,nssv1752678,nssv1752589,nssv1752651,nssv1752588,nssv1752621,nssv1752667,nssv1752677,nssv1752592,nssv1752674,nssv1752666,nssv1752627,nssv1752663,nssv1752584,nssv1752670,nssv1752643,nssv1752602,nssv1752645,nssv1752601,nssv1752680,nssv1752609,nssv1752610,nssv1752625,nssv1752675,nssv1752631,nssv1752673,nssv1752655,nssv1752624,nssv1752671,nssv1752679,nssv1752659,nssv1752653,nssv1752657,nssv1752660,nssv1752619,nssv1752641,nssv1752650,nssv1752617,nssv1752639,nssv1752616,nssv1752630,nssv1752622,nssv1752658,nssv1752676 M 97 10 0 RERE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1854 1 8748742 8782277 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7349 M 9 1 0 RERE NA12156 nsv945761 1 8767810 8772287 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752709,nssv1752750,nssv1752682,nssv1752747,nssv1752699,nssv1752738,nssv1752688,nssv1752706,nssv1752765,nssv1752757,nssv1752759,nssv1752733,nssv1752695,nssv1752717,nssv1752683,nssv1752727,nssv1752766,nssv1752731,nssv1752710,nssv1752751,nssv1752702,nssv1752707,nssv1752761,nssv1752708,nssv1752684,nssv1752741,nssv1752700,nssv1752715,nssv1752692,nssv1752756,nssv1752687,nssv1752714,nssv1752758,nssv1752732,nssv1752701,nssv1752725,nssv1752691,nssv1752713,nssv1752703,nssv1752777,nssv1752686,nssv1752737,nssv1752762,nssv1752739,nssv1752763,nssv1752749,nssv1752705,nssv1752755,nssv1752697,nssv1752735,nssv1752693,nssv1752743,nssv1752764,nssv1752704,nssv1752685,nssv1752773,nssv1752694,nssv1752753,nssv1752712,nssv1752730,nssv1752689,nssv1752745,nssv1752760,nssv1752723,nssv1752696,nssv1752748,nssv1752690,nssv1752719,nssv1752698,nssv1752774,nssv1752767,nssv1752744,nssv1752769,nssv1752736,nssv1752716,nssv1752726,nssv1752771,nssv1752775,nssv1752681,nssv1752734,nssv1752718,nssv1752728,nssv1752711,nssv1752729,nssv1752740,nssv1752742,nssv1752746,nssv1752768,nssv1752776,nssv1752772,nssv1752722,nssv1752754,nssv1752724,nssv1752721,nssv1752770,nssv1752752,nssv1752720 M 97 10 0 RERE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945762 1 8805956 8819390 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752799,nssv1753238,nssv1752793,nssv1753258,nssv1752779,nssv1752839,nssv1752806,nssv1752808,nssv1753255,nssv1752816,nssv1752788,nssv1752825,nssv1752809,nssv1753240,nssv1752786,nssv1752828,nssv1752785,nssv1753236,nssv1753253,nssv1753264,nssv1753248,nssv1753256,nssv1752790,nssv1752833,nssv1752797,nssv1752819,nssv1753251,nssv1752813,nssv1752784,nssv1753257,nssv1752807,nssv1753243,nssv1753249,nssv1753242,nssv1752789,nssv1753241,nssv1752792,nssv1753235,nssv1752798,nssv1752835,nssv1752800,nssv1753265,nssv1752802,nssv1753239,nssv1753246,nssv1752814,nssv1753254,nssv1752810,nssv1752783,nssv1753259,nssv1753250,nssv1753245,nssv1752794,nssv1752826,nssv1752787,nssv1752836,nssv1753247,nssv1752824,nssv1752795,nssv1752830,nssv1753252,nssv1752803,nssv1752781,nssv1753237,nssv1752782,nssv1752805,nssv1752780,nssv1752838,nssv1752791,nssv1753261,nssv1752796,nssv1752820,nssv1752811,nssv1752831,nssv1752812,nssv1752804,nssv1753263,nssv1752821,nssv1752801,nssv1752834,nssv1753262,nssv1752827,nssv1752841,nssv1752829,nssv1753233,nssv1752832,nssv1752823,nssv1752817,nssv1753244,nssv1752840,nssv1752818,nssv1752822,nssv1753234,nssv1752778,nssv1752815,nssv1753260,nssv1752837 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2758919 1 8810828 8839227 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757721 M 270 1 0 "" NA18863 nsv1010058 1 8813369 8827736 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469656 M 29084 1 0 "" nsv545345 1 8813712 9018197 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709653 M 17421 1 0 CA6,ENO1,ENO1-AS1,MIR6728,SLC2A7 nsv1001865 1 8826518 8855829 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463122 M 29084 1 0 ENO1,MIR6728 nsv945763 1 8876213 8886596 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753276,nssv1753316,nssv1753267,nssv1753320,nssv1753284,nssv1753305,nssv1753294,nssv1753359,nssv1753287,nssv1753291,nssv1753351,nssv1753354,nssv1753268,nssv1753357,nssv1753283,nssv1753356,nssv1753350,nssv1753303,nssv1753279,nssv1753326,nssv1753275,nssv1753330,nssv1753273,nssv1753310,nssv1753295,nssv1753296,nssv1753297,nssv1753314,nssv1753343,nssv1753361,nssv1753285,nssv1753353,nssv1753272,nssv1753319,nssv1753346,nssv1753313,nssv1753269,nssv1753337,nssv1753344,nssv1753324,nssv1753345,nssv1753327,nssv1753352,nssv1753341,nssv1753348,nssv1753333,nssv1753349,nssv1753318,nssv1753280,nssv1753302,nssv1753278,nssv1753336,nssv1753277,nssv1753300,nssv1753347,nssv1753301,nssv1753290,nssv1753322,nssv1753271,nssv1753340,nssv1753282,nssv1753317,nssv1753288,nssv1753332,nssv1753274,nssv1753307,nssv1753286,nssv1753342,nssv1753281,nssv1753266,nssv1753270,nssv1753325,nssv1753311,nssv1753362,nssv1753355,nssv1753339,nssv1753331,nssv1753338,nssv1753323,nssv1753321,nssv1753289,nssv1753358,nssv1753293,nssv1753312,nssv1753315,nssv1753329,nssv1753306,nssv1753334,nssv1753360,nssv1753309,nssv1753292,nssv1753308,nssv1753328,nssv1753298,nssv1753299,nssv1753335,nssv1753304 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945764 1 8888405 8892485 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753442,nssv1753426,nssv1753377,nssv1753427,nssv1753449,nssv1753435,nssv1753445,nssv1753405,nssv1753364,nssv1753402,nssv1753391,nssv1753390,nssv1753383,nssv1753432,nssv1753380,nssv1753431,nssv1753384,nssv1753456,nssv1753378,nssv1753454,nssv1753371,nssv1753403,nssv1753448,nssv1753401,nssv1753447,nssv1753395,nssv1753376,nssv1753438,nssv1753373,nssv1753389,nssv1753446,nssv1753416,nssv1753370,nssv1753450,nssv1753381,nssv1753412,nssv1753382,nssv1753363,nssv1753443,nssv1753393,nssv1753392,nssv1753423,nssv1753366,nssv1753417,nssv1753365,nssv1753421,nssv1753375,nssv1753396,nssv1753367,nssv1753430,nssv1753394,nssv1753434,nssv1753368,nssv1753451,nssv1753374,nssv1753458,nssv1753444,nssv1753410,nssv1753441,nssv1753407,nssv1753372,nssv1753436,nssv1753387,nssv1753419,nssv1753379,nssv1753399,nssv1753385,nssv1753422,nssv1753369,nssv1753398,nssv1753440,nssv1753400,nssv1753437,nssv1753428,nssv1753413,nssv1753424,nssv1753439,nssv1753411,nssv1753459,nssv1753453,nssv1753425,nssv1753397,nssv1753404,nssv1753455,nssv1753429,nssv1753388,nssv1753418,nssv1753414,nssv1753415,nssv1753433,nssv1753420,nssv1753406,nssv1753409,nssv1753457,nssv1753408,nssv1753452,nssv1753386 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv527110 1 8913728 8914460 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703492 M 2026 0 1 "" esv2763506 1 8924074 8950501 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7031523 M 1109 1 0 CA6 SW_1056 nsv1965 1 8926325 8930244 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3239 M 9 1 0 CA6 NA12878 esv2762130 1 8930143 8935324 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004941 M 1109 0 1 CA6 RW_0183 nsv516097 1 8931993 8934309 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv660321,nssv660728,nssv671923,nssv666175,nssv660579,nssv671111,nssv671439,nssv692368,nssv669183 M 2026 0 9 CA6 esv3890637 1 8938023 8967149 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789263 M 3017 1 0 CA6 nsv471857 1 8943304 8943304 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020083 M 9 1 0 CA6 NA18555 nsv526389 1 8961609 8972459 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702688 M 2026 0 1 "" esv2763512 1 8961609 8979094 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7031634 M 1109 0 1 "" SW_1309 nsv1009004 1 8962291 8997052 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482463 M 29084 0 1 SLC2A7 dgv15n100 1 8974741 9039330 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009990,nsv1005347 M 29084 0 2 SLC2A5,SLC2A7 nsv462616 1 8981133 9003553 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538732 M 1557 1 0 SLC2A7 HGDP00806 nsv525092 1 8981133 9003553 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701151 M 2026 1 0 SLC2A7 nsv545346 1 8981133 9003553 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173657 M 17421 1 0 SLC2A7 HGDP00806 nsv1004025 1 8983629 9051732 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467938 M 29084 1 0 SLC2A5,SLC2A7 nsv462727 1 9002998 9055643 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538823 M 1557 0 1 SLC2A5,SLC2A7 1780854205_A nsv545347 1 9002998 9055643 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173658 M 17421 0 1 SLC2A5,SLC2A7 1780854205_A nsv831981 1 9014304 9170154 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442663 M 95 0 1 GPR157,MIR34A,SLC2A5 esv1504235 1 9036107 9036107 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3665009 M 2 1 0 SLC2A5 HuRef esv1740239 1 9036142 9036142 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4265262 M 2 1 0 SLC2A5 HuRef nsv512717 1 9043542 9044383 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625341 M 1 1 0 SLC2A5 1 esv2422210 1 9089163 9197219 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161558 M 181 1 0 GPR157,MIR34A ND01701 esv1519481 1 9098831 9098831 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4133256 M 2 1 0 GPR157 HuRef nsv832092 1 9109155 9287189 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442674 M 95 0 1 GPR157,H6PD,MIR34A,SPSB1 esv3385422 1 9152896 9153560 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652100 M 185 1 0 "" NA19240 dgv16n100 1 9220247 9334056 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006294,nsv999955,nsv1004906,nsv1002217,nsv1011354,nsv1009914,nsv1013944,nsv1010537,nsv1014684,nsv1009956 M 29084 17 0 H6PD,SPSB1 esv2763409 1 9230624 9327604 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032634,essv7031967,essv7031856,essv7032189,essv7031745,essv7032078,essv7032412,essv7032523,essv7032301 M 1109 9 0 H6PD,SPSB1 SW_0009,SW_0072,SW_0189,SW_0199,SW_0641,SW_1193,SW_1358,SW_1467,SW_1503 dgv96n54 1 9232333 9310031 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545358,nsv545348,nsv545359,nsv545352,nsv545351 M 17421 9 0 H6PD,SPSB1 1780854392_A dgv97n54 1 9232333 9335374 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545357,nsv545356,nsv545360,nsv545361,nsv545354,nsv545355,nsv545353,nsv545349 M 17421 12 0 H6PD,SPSB1 1780854556_A,1780862066_A,1780862577_A,HGDP00136 dgv2e55 1 9238434 9327280 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750843,esv2750844,esv2750846 M 771 9 0 H6PD,SPSB1 BEC_287,BEC_670,SPC_192 esv23318 1 9240393 9243813 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16429 M 40 0 1 H6PD NA12749 dgv40e59 1 9240552 9243650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3335318,esv3394437,esv3446798 M 185 3 0 H6PD NA19238,NA19239,NA19240 nsv545350 1 9240988 9289439 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709657 M 17421 1 0 H6PD,SPSB1 dgv3n27 1 9240988 9334995 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463172,nsv462839,nsv463061,nsv462950,nsv463950 M 1557 5 0 H6PD,SPSB1 1780854392_A,1780854556_A,1780862066_A,1780862577_A,HGDP00136 nsv520191 1 9243828 9319247 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696393,nssv662674,nssv661584,nssv688630,nssv687341 M 2026 5 0 H6PD,SPSB1 dgv17n100 1 9249233 9332832 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999816,nsv1013520,nsv1007996,nsv1002787,nsv1012017,nsv1003940,nsv1002706,nsv1006562,nsv1001425,nsv1004173,nsv1002792 M 29084 39 0 H6PD,SPSB1 esv2750845 1 9250000 9311805 CNV gain Pinto_et_al_2007 17911159 SNP array essv6985406,essv6980777 M 771 2 0 H6PD,SPSB1 BEC_149 esv2201511 1 9292566 9292989 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4737746 M 1 0 1 SPSB1 NA18507 esv1000068 1 9292718 9292718 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571220 M 3 1 0 SPSB1 HuRef nsv464172 1 9300451 9336233 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540129 M 1557 0 1 SPSB1 1780854065_A nsv545362 1 9300451 9336233 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173664 M 17421 0 1 SPSB1 1780854065_A nsv827253 1 9353942 9354616 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431791 M 31 0 1 "" AK20 esv2616653 1 9361917 9363588 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5231075 M 1 0 1 "" NA18507 esv2203424 1 9362487 9363139 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4643328 M 1 0 1 "" NA18507 nsv1013224 1 9363627 9622355 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474728 M 29084 1 0 LOC100506022,SLC25A33,TMEM201 esv2443842 1 9393000 9393819 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5170213 M 1 1 0 "" NA18507 esv3367825 1 9393747 9395170 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652101 M 185 1 0 "" NA19240 nsv545363 1 9418158 9600440 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709671 M 17421 0 1 SLC25A33,TMEM201 nsv517755 1 9437433 9462280 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv661666,nssv674995,nssv653129,nssv658552,nssv693425,nssv670279,nssv692200 M 2026 0 7 "" esv3379170 1 9459352 9461150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692431 M 185 1 0 "" NA19239 dgv41e59 1 9460052 9461150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3382125,esv3423918 M 185 2 0 "" NA19238,NA19240 esv2476310 1 9516165 9522726 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5297378 M 1 0 1 SLC25A33 NA18507 esv2577357 1 9517491 9520883 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5368321 M 1 0 1 "" NA18507 esv28451 1 9518760 9520515 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11914,esv15031 M 40 0 5 "" NA18505,NA18907,NA19147,NA19190,NA19257 dgv98n54 1 9518972 9519558 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545364,nsv545368,nsv545365 M 17421 0 25 "" dgv99n54 1 9518972 9520002 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545367,nsv545369,nsv545366 M 17421 0 3 "" dgv100n54 1 9519260 9520472 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545374,nsv545370,nsv545376,nsv545375 M 17421 5 0 "" dgv101n54 1 9519353 9519558 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545371,nsv545372 M 17421 0 6 "" nsv545373 1 9519353 9520315 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709707 M 17421 0 1 "" nsv2076 1 9519805 9554020 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3078 M 9 1 0 SLC25A33 NA18555 nsv545377 1 9519824 9525549 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709712 M 17421 1 0 SLC25A33 nsv945765 1 9556221 9561702 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753471,nssv1754759,nssv1753475,nssv1753483,nssv1753491,nssv1753487,nssv1753461,nssv1753485,nssv1753474,nssv1754762,nssv1754774,nssv1754748,nssv1753481,nssv1754747,nssv1753477,nssv1754785,nssv1754775,nssv1754761,nssv1753480,nssv1754764,nssv1754771,nssv1754742,nssv1753472,nssv1754781,nssv1754778,nssv1754788,nssv1754776,nssv1754752,nssv1753467,nssv1754763,nssv1753478,nssv1754730,nssv1754773,nssv1754782,nssv1753470,nssv1754728,nssv1753473,nssv1754745,nssv1753488,nssv1754739,nssv1753479,nssv1754726,nssv1753462,nssv1754729,nssv1754770,nssv1754724,nssv1753464,nssv1754732,nssv1754769,nssv1754749,nssv1754772,nssv1754787,nssv1753469,nssv1754767,nssv1754777,nssv1754751,nssv1753463,nssv1754736,nssv1753466,nssv1754780,nssv1753465,nssv1754731,nssv1753484,nssv1754746,nssv1753489,nssv1754760,nssv1753476,nssv1754725,nssv1753468,nssv1754727,nssv1753482,nssv1754783,nssv1754758,nssv1753460,nssv1754754,nssv1753486,nssv1754743,nssv1754741,nssv1754755,nssv1754735,nssv1754733,nssv1753490,nssv1754738,nssv1754766,nssv1754756,nssv1754744,nssv1754750,nssv1754757,nssv1754737,nssv1754768,nssv1754740,nssv1754734,nssv1754784,nssv1754786,nssv1754753,nssv1754765,nssv1754779 M 97 10 0 SLC25A33 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474814 1 9567233 9567233 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018493 M 9 1 0 "" NA18956 nsv2187 1 9589883 9616337 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1500,nssv3119,nssv6883,nssv3334,nssv10282,nssv4948,nssv9906 M 9 7 0 TMEM201 NA12156,NA12878,NA18507,NA18555,NA18956,NA19129,NA19240 nsv508847 1 9594782 9661476 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619767,nssv623772,nssv621081 M 4 3 0 C1orf200,PIK3CD,TMEM201 NA10860,NA15510,NA18994 esv1010171 1 9606595 9608107 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565355 M 3 1 0 "" HuRef nsv832203 1 9649219 9782796 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442685 M 95 0 1 CLSTN1,PIK3CD esv3302499 1 9662936 9663152 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731291,essv7731648,essv7730969 M 185 3 0 PIK3CD NA19238,NA19239,NA19240 esv3377271 1 9662949 9663163 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670923,essv8670925,essv8670924 M 185 3 0 PIK3CD NA19238,NA19239,NA19240 nsv160151 1 9685183 9688695 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178729 M 24 PIK3CD nsv827364 1 9745319 9747784 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431975 M 31 0 1 CLSTN1 NA18972 nsv2298 1 9748873 9780074 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10302 M 9 0 1 CLSTN1 NA18956 dgv11n67 1 9769142 9779958 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827697,nsv827586,nsv827475 M 31 0 4 CLSTN1 NA18526,NA18564,NA18570,NA18949 nsv498662 1 9769237 9779283 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585382 M 9 0 1 CLSTN1 dgv102n54 1 9769619 9779274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545378,nsv545379 M 17421 0 2 CLSTN1 nsv545380 1 9840770 9909594 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709715 M 17421 0 1 CTNNBIP1 nsv1001742 1 9894363 10039354 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481106 M 29084 1 0 LZIC,NMNAT1,RBP7,UBE4B esv3336969 1 9995551 9995551 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740981 M 185 1 0 RBP7 NA19240 nsv527217 1 10016044 10179754 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703617 M 2026 1 0 UBE4B nsv945766 1 10035116 10037816 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754793,nssv1754862,nssv1754871,nssv1754824,nssv1754790,nssv1754883,nssv1754872,nssv1754856,nssv1754809,nssv1754847,nssv1754811,nssv1754845,nssv1754820,nssv1754859,nssv1754868,nssv1754850,nssv1754873,nssv1754814,nssv1754875,nssv1754865,nssv1754806,nssv1754844,nssv1754810,nssv1754881,nssv1754817,nssv1754830,nssv1754874,nssv1754843,nssv1754797,nssv1754834,nssv1754796,nssv1754880,nssv1754804,nssv1754831,nssv1754808,nssv1754789,nssv1754870,nssv1754878,nssv1754800,nssv1754864,nssv1754813,nssv1754857,nssv1754803,nssv1754885,nssv1754802,nssv1754812,nssv1754794,nssv1754860,nssv1754867,nssv1754876,nssv1754798,nssv1754849,nssv1754869,nssv1754882,nssv1754866,nssv1754848,nssv1754807,nssv1754825,nssv1754791,nssv1754846,nssv1754799,nssv1754826,nssv1754801,nssv1754858,nssv1754818,nssv1754821,nssv1754792,nssv1754839,nssv1754795,nssv1754842,nssv1754805,nssv1754855,nssv1754823,nssv1754877,nssv1754816,nssv1754884,nssv1754828,nssv1754833,nssv1754827,nssv1754832,nssv1754879,nssv1754835,nssv1754837,nssv1754838,nssv1754840,nssv1754836,nssv1754822,nssv1754815,nssv1754841,nssv1754851,nssv1754852,nssv1754854,nssv1754863,nssv1754861,nssv1754819,nssv1754829,nssv1754853 M 97 10 0 UBE4B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522629 1 10048352 10161784 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv706027 M 2026 1 0 UBE4B esv3890748 1 10075740 10153093 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25787927 M 3017 1 0 UBE4B nsv525216 1 10118527 10123161 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701302 M 2026 1 0 UBE4B esv2562286 1 10152982 10154339 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5304967 M 1 0 1 UBE4B NA18507 esv2758920 1 10160657 10505141 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757722 M 270 1 2 APITD1,APITD1-CORT,CORT,DFFA,KIF1B,PEX14,PGD,UBE4B NA18912,NA18965,NA19130 nsv512718 1 10170195 10170662 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625342 M 1 1 0 "" 1 nsv545381 1 10219039 10346575 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709716 M 17421 1 0 KIF1B nsv545382 1 10231613 10299808 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709717,nssv709718 M 17421 0 2 KIF1B nsv477279 1 10254717 10254717 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017679 M 9 1 0 KIF1B NA18517 esv4531 1 10257291 10257519 CNV loss Wang_et_al_2008 18987735 Sequencing essv26972 M 1 0 1 KIF1B YH esv3890859 1 10264103 10308251 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25784884 M 3017 0 1 KIF1B esv2550823 1 10274566 10275850 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5364930 M 1 0 1 KIF1B NA18507 nsv2409 1 10288677 10310823 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3425 M 9 1 0 KIF1B NA12878 dgv1n17 1 10289074 10310291 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437200,nsv437201 M 60 0 2 KIF1B NA18500,NA18914 nsv1003027 1 10289919 10300558 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468399 M 29084 0 1 KIF1B nsv436146 1 10291453 10301596 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466361 M 2 0 1 KIF1B NA18505 nsv8102 1 10291557 10301433 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv26900,nssv26885,nssv24611 M 31 0 3 KIF1B NA18502,NA18853,NA19132 esv23835 1 10292005 10301472 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12065 M 40 0 4 KIF1B NA18502,NA18505,NA18508,NA18861 esv2421759 1 10292133 10300570 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5037021,essv5030658,essv5011913,essv5131012,essv5146221,essv5072375,essv5053735,essv5071040,essv5077233,essv5095610,essv5075248,essv5059809,essv5104647,essv5033654,essv5093833,essv5031784,essv5089301,essv5014103,essv5029372,essv5012723,essv5028433,essv5032695,essv5100113,essv5109789,essv5031808,essv5142692,essv5118117,essv5145720,essv5062374,essv5045696,essv5151358,essv5158917,essv5005447,essv5098414,essv5081479,essv5060455,essv5155081,essv5066898,essv5124066,essv5011379,essv5117819,essv5033256,essv5073299,essv5131248,essv5087410,essv5110636,essv5049783,essv5054475,essv5062929,essv5048097,essv5131639,essv5145827,essv5074473,essv5107159,essv5064063,essv5084373,essv5141223,essv5103254,essv5013970 M 1184 0 59 KIF1B NA18497,NA18499,NA18500,NA18501,NA18505,NA18506,NA18508,NA18510,NA18853,NA18854,NA18861,NA18863,NA18867,NA18868,NA18869,NA18912,NA18913,NA18914,NA18933,NA18935,NA19118,NA19130,NA19132,NA19176,NA19179,NA19180,NA19184,NA19185,NA19186,NA19192,NA19198,NA19207,NA19213,NA19215,NA19235,NA19237,NA19238,NA19248,NA19249,NA19314,NA19359,NA19374,NA19434,NA19444,NA19452,NA19664,NA19703,NA19705,NA19819,NA20294,NA20295,NA20297,NA20322,NA20348,NA21300,NA21418,NA21441,NA21520,NA21613 nsv515546 1 10292899 10296090 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv686246,nssv682975,nssv667133,nssv660763,nssv695737,nssv667908,nssv663872,nssv679262,nssv691095,nssv658813,nssv666539,nssv658241,nssv657555,nssv680418,nssv654559,nssv690059,nssv680299,nssv671141,nssv656820,nssv676915,nssv690144,nssv656381,nssv687648 M 2026 0 23 KIF1B nsv545383 1 10292899 10296090 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173665 M 17421 0 1 KIF1B HGDP00923 nsv818666 1 10292899 10296090 CNV loss Wang_et_al_2007 17921354 SNP array nssv1418422,nssv1417808,nssv1417809,nssv1416820 M 112 0 4 KIF1B NA18853,NA18854,NA19192,NA19238 nsv545384 1 10292899 10299808 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709719 M 17421 0 1 KIF1B nsv1011917 1 10292977 10304901 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471935 M 29084 0 1 KIF1B esv2764182 1 10292989 10300570 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004953,essv7004947,essv7004945,essv7004957,essv7004942,essv7004949,essv7004946,essv7004956,essv7004943,essv7004954,essv7004948,essv7004951,essv7004952,essv7004958,essv7004950 M 1109 0 15 KIF1B RW_0014,RW_0028,RW_0155,RW_0178,RW_0201,RW_0220,RW_0258,RW_0266,RW_0306,RW_0329,RW_0538,RW_0576,RW_0616,RW_0653,RW_0660 nsv441678 1 10293128 10300570 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617780,nssv1617791,nssv1617869,nssv1617713,nssv1617747,nssv1617891,nssv1617736,nssv1617847,nssv1617902,nssv1617758,nssv1617813,nssv1617836,nssv1617858,nssv1617880,nssv1617802,nssv1617725,nssv1617824,nssv1617769 M 270 0 18 KIF1B NA18500,NA18501,NA18502,NA18505,NA18506,NA18508,NA18853,NA18854,NA18861,NA18863,NA18912,NA18913,NA18914,NA19130,NA19132,NA19192,NA19207,NA19238 nsv513981 1 10293441 10300549 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2845153,nssv2845140,nssv2845157,nssv2843660,nssv2845137,nssv2845149,nssv2845141,nssv2845148,nssv2845138,nssv2845156,nssv2845150,nssv2845167,nssv2845142,nssv2845145,nssv2845154,nssv2845161,nssv2845162,nssv2845158,nssv2845160,nssv2845143,nssv2843659,nssv2845155,nssv2845144,nssv2845151,nssv2845166,nssv2845159,nssv2845165,nssv2845146,nssv2845147,nssv2845139,nssv2845164,nssv2845152,nssv2845163 M 2366 0 33 KIF1B NA18497,NA18499,NA18500,NA18501,NA18506,NA18508,NA18510,NA18853,NA18854,NA18861,NA18863,NA18867,NA18868,NA18869,NA18908,NA18933,NA18935,NA19118,NA19130,NA19132,NA19179,NA19180,NA19184,NA19185,NA19186,NA19192,NA19198,NA19207,NA19235,NA19237,NA19248,NA19249,NA21441 nsv437970 1 10297766 10301003 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468185,nssv471534,nssv467741,nssv468074,nssv467852,nssv467963 M 269 0 6 KIF1B NA18500,NA18502,NA18912,NA18914,NA19130,NA19132 esv2764192 1 10306321 10516773 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7004959,essv7004960 M 1109 2 0 APITD1,APITD1-CORT,CORT,DFFA,KIF1B,PEX14,PGD RW_0575,RW_0621 nsv8213 1 10373501 10383026 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28055 M 31 1 0 PGD NA19221 esv1010529 1 10398782 10401173 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564483 M 3 0 1 PGD HuRef nsv8324 1 10404184 10407232 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21428,nssv11773,nssv24608,nssv28037,nssv24609,nssv26887,nssv28548,nssv28046,nssv29251,nssv28052,nssv26889,nssv24615,nssv24596,nssv26893,nssv26875,nssv12119,nssv28538,nssv21445,nssv29270,nssv24601 M 31 0 20 "" NA07029,NA10839,NA10847,NA12155,NA12740,NA12802,NA18502,NA18504,NA18517,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18972,NA18975,NA18980,NA19132,NA19173 nsv511676 1 10404830 10406384 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626314 M 1 0 1 "" 1 esv7749 1 10404835 10406590 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30190 M 1 0 0 "" dgv12n67 1 10404929 10406229 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827808,nsv827919 M 31 0 11 "" AK12,AK16,AK20,AK4,NA18526,NA18552,NA18564,NA18951,NA18968,NA18972,NA18997 esv3677 1 10405039 10406535 CNV loss Wang_et_al_2008 18987735 Sequencing essv26118 M 1 0 1 "" YH nsv160262 1 10405068 10406366 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178840 M 24 "" esv26404 1 10405137 10406094 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14503 M 40 0 7 "" NA07037,NA12004,NA12749,NA15510,NA18517,NA18909,NA19129 dgv103n54 1 10405170 10405754 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545388,nsv545386,nsv545390,nsv545385 M 17421 4 0 "" dgv104n54 1 10405170 10406043 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545391,nsv545387,nsv545392,nsv545389 M 17421 0 188 "" nsv545393 1 10405588 10406043 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709912 M 17421 0 1 "" nsv545394 1 10405748 10406043 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709915,nssv709914,nssv709913,nssv709919,nssv709920,nssv709918,nssv709917,nssv709916 M 17421 0 8 "" esv2421360 1 10466423 10467633 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5057594,essv5122639,essv5125662,essv5087529,essv5151994,essv5111430,essv5118967,essv5148686,essv5079670,essv5061676,essv5023863,essv5010570,essv5072629,essv5120264,essv5154504,essv5088559,essv5142946,essv5115009,essv5005178,essv5099736,essv5160849,essv5138311,essv5145841,essv5074992,essv5030172,essv5151853,essv5160550,essv5102680,essv5094667,essv5043282,essv5037011 M 1184 0 31 PEX14 NA07045,NA18497,NA18499,NA18870,NA18917,NA18930,NA19010,NA19041,NA19098,NA19138,NA19178,NA19180,NA19192,NA19194,NA19347,NA19399,NA19713,NA19983,NA20288,NA21295,NA21333,NA21339,NA21356,NA21390,NA21399,NA21401,NA21418,NA21436,NA21634,NA21636,NA21682 nsv2521 1 10476117 10520758 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7460 M 9 0 1 PEX14 NA12156 nsv8435 1 10490771 10494961 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24613 M 31 1 0 PEX14 NA18942 nsv545395 1 10507259 10536247 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709921 M 17421 0 1 PEX14 nsv1015079 1 10533990 10567763 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478770 M 29084 0 1 PEX14 nsv1009596 1 10548836 10575192 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3697890 M 29084 0 1 PEX14 nsv517464 1 10561191 10565784 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv683372,nssv681545,nssv679135,nssv652091,nssv693755,nssv685750 M 2026 0 6 PEX14 nsv818777 1 10561191 10565784 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417173 M 112 0 1 PEX14 NA18550 esv275132 1 10578911 10580499 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586077 M 1250 0 1 PEX14 dgv105n54 1 10595681 10719453 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545399,nsv545398,nsv545396,nsv545402,nsv545397 M 17421 0 5 CASZ1,PEX14 1780862093_A,1780862573_A dgv4n27 1 10595781 10719453 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv464505,nsv465061 M 1557 0 2 CASZ1,PEX14 1780862093_A,1780862573_A esv29966 1 10599387 10796739 CNV loss Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv84205 M 2 0 1 CASZ1,PEX14 HuRef nsv828030 1 10600149 10717748 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436327 M 31 1 0 CASZ1,PEX14 NA18542 nsv545400 1 10606685 10764608 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709925 M 17421 0 1 CASZ1,PEX14 nsv464949 1 10613535 10679786 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540805 M 1557 0 1 CASZ1 1780862345_A nsv545401 1 10613535 10679786 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173667 M 17421 0 1 CASZ1 1780862345_A nsv525693 1 10616712 10763492 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701852 M 2026 0 1 CASZ1 nsv828141 1 10618064 10626784 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423940 M 31 1 0 CASZ1 NA18947 nsv828252 1 10620397 10625621 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433409 M 31 1 0 CASZ1 NA18526 nsv828364 1 10620397 10686751 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440798 M 31 1 0 CASZ1 NA18969 nsv436924 1 10627275 10654856 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466805 M 60 0 1 CASZ1 NA10847 nsv832314 1 10627398 10782506 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442718,nssv1442696,nssv1442707 M 95 0 3 CASZ1 nsv438081 1 10628678 10640184 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468296,nssv468407 M 269 0 2 CASZ1 NA10847,NA12146 nsv545403 1 10632028 10673019 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709926 M 17421 0 1 CASZ1 nsv508858 1 10633211 10735797 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619768 M 4 1 0 CASZ1 NA10860 nsv818888 1 10642232 10673019 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417515 M 112 0 1 CASZ1 NA18968 dgv42e59 1 10643852 10645650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3385957,esv3442563,esv3359154 M 185 3 0 CASZ1 NA19238,NA19239,NA19240 esv997282 1 10654369 10668236 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564310 M 3 0 1 CASZ1 HuRef esv2758921 1 10665089 10977734 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757723 M 270 0 12 C1orf127,CASZ1 NA10846,NA10857,NA12234,NA12248,NA18504,NA18558,NA18563,NA18570,NA18854,NA18970,NA18987,NA19143 nsv8546 1 10675514 10679354 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28027,nssv28926 M 31 2 0 CASZ1 NA07029,NA12740 nsv465172 1 10679786 10719453 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541028 M 1557 0 1 CASZ1 1780862416_A nsv545404 1 10679786 10719453 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173669 M 17421 0 1 CASZ1 1780862416_A nsv465283 1 10690489 10738008 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541114 M 1557 0 1 CASZ1 NINDS_198 nsv545405 1 10690489 10738008 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173670 M 17421 0 1 CASZ1 NINDS_198 esv3435817 1 10759052 10761350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691738 M 185 1 0 CASZ1 NA19240 esv3443222 1 10760052 10761350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691739 M 185 1 0 CASZ1 NA19238 nsv159406 1 10767813 10767813 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177984 M 24 CASZ1 nsv832425 1 10826432 11045562 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442741,nssv1442729 M 95 0 2 C1orf127,MASP2,SRM,TARDBP dgv43e59 1 10835252 10836850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3401813,esv3379915 M 185 2 0 "" NA19239,NA19240 esv2418090 1 10835960 10836423 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4522724 M 1 0 1 "" NA18507 nsv545406 1 10838094 10857819 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709927 M 17421 0 1 "" esv27036 1 10874013 10874782 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19765 M 40 0 1 "" NA19147 nsv516264 1 10906538 10907149 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv655703,nssv680546,nssv662101,nssv676652,nssv688415,nssv693249,nssv667169,nssv683701 M 2026 0 8 "" esv2576089 1 10915938 10916329 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5340923 M 1 0 1 "" NA18507 nsv508869 1 10938844 10991103 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621082 M 4 1 0 C1orf127 NA15510 esv3350549 1 10953467 10954081 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808880 M 185 1 0 C1orf127 NA12878 esv1628805 1 10965819 10966556 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3981893 M 2 0 1 "" HuRef esv3450829 1 10973952 10976550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691745 M 185 1 0 "" NA12878 esv2592186 1 10982291 10985877 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5335168 M 1 0 1 "" NA18507 nsv545407 1 10982662 11360613 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709928 M 17421 1 0 ANGPTL7,EXOSC10,MASP2,MTOR,MTOR-AS1,SRM,TARDBP,UBIAD1 esv23739 1 10982754 10984494 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14228 M 40 0 1 "" NA19190 nsv945768 1 11004801 11006712 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754921,nssv1754929,nssv1754914,nssv1754954,nssv1754931,nssv1754944,nssv1754981,nssv1751922,nssv1754918,nssv1754946,nssv1754932,nssv1754949,nssv1751910,nssv1754968,nssv1754925,nssv1754965,nssv1754909,nssv1754967,nssv1754923,nssv1754948,nssv1754904,nssv1754952,nssv1754982,nssv1754971,nssv1754924,nssv1754941,nssv1751909,nssv1754933,nssv1754920,nssv1754959,nssv1754980,nssv1754938,nssv1754906,nssv1754970,nssv1754910,nssv1754936,nssv1754912,nssv1754961,nssv1754922,nssv1754976,nssv1754927,nssv1754942,nssv1754911,nssv1751913,nssv1751906,nssv1754928,nssv1751908,nssv1754966,nssv1754983,nssv1751920,nssv1754905,nssv1751912,nssv1754908,nssv1754951,nssv1754917,nssv1754964,nssv1751905,nssv1754957,nssv1754907,nssv1754958,nssv1754915,nssv1754963,nssv1754934,nssv1754953,nssv1754916,nssv1754926,nssv1751911,nssv1751914,nssv1754913,nssv1754969,nssv1754919,nssv1754978,nssv1754977,nssv1754973,nssv1754943,nssv1751915,nssv1754940,nssv1751916,nssv1754956,nssv1754960,nssv1754975,nssv1754974,nssv1754945,nssv1754955,nssv1754962,nssv1754939,nssv1751919,nssv1754930,nssv1754903,nssv1754979,nssv1754935,nssv1754947,nssv1754950,nssv1751921,nssv1751917,nssv1754972,nssv1754937 M 97 10 0 TARDBP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv25881 1 11020149 11028638 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13377,esv21307 M 40 2 1 MASP2 NA06985,NA12044,NA19257 nsv545408 1 11022017 11024731 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709929 M 17421 1 0 MASP2 dgv106n54 1 11022420 11024569 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545409,nsv545410 M 17421 0 2 MASP2 nsv545411 1 11022759 11024569 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709932 M 17421 1 0 MASP2 nsv474577 1 11040944 11040944 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012643 M 9 1 0 SRM NA18956 esv3303581 1 11134972 11134973 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7743300,essv7754450,essv7741490 M 185 3 0 MTOR NA18871,NA18916,NA19005 esv3427172 1 11134991 11135107 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898624,essv8898626,essv8898623 M 185 3 0 MTOR NA18871,NA18916,NA19005 nsv945769 1 11214781 11216436 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751945,nssv1751948,nssv1751939,nssv1752951,nssv1751931,nssv1752919,nssv1752935,nssv1752892,nssv1751924,nssv1752904,nssv1752940,nssv1752889,nssv1751930,nssv1752906,nssv1751936,nssv1752907,nssv1752881,nssv1752880,nssv1752934,nssv1752915,nssv1751927,nssv1752948,nssv1751947,nssv1752888,nssv1751926,nssv1752890,nssv1752936,nssv1752924,nssv1751928,nssv1752900,nssv1752938,nssv1752932,nssv1751925,nssv1752944,nssv1751944,nssv1752893,nssv1752879,nssv1752885,nssv1751937,nssv1752897,nssv1751949,nssv1752926,nssv1751934,nssv1752928,nssv1751941,nssv1752952,nssv1752941,nssv1752908,nssv1751938,nssv1752921,nssv1751946,nssv1752922,nssv1752937,nssv1752913,nssv1751932,nssv1752946,nssv1752933,nssv1752950,nssv1751935,nssv1752895,nssv1752943,nssv1752925,nssv1751933,nssv1752929,nssv1751943,nssv1752912,nssv1752878,nssv1752911,nssv1752939,nssv1752891,nssv1751942,nssv1752876,nssv1752930,nssv1752916,nssv1752899,nssv1752882,nssv1752927,nssv1751923,nssv1752903,nssv1752954,nssv1752883,nssv1752905,nssv1752914,nssv1752884,nssv1752947,nssv1752877,nssv1752949,nssv1752918,nssv1752896,nssv1752923,nssv1752917,nssv1752945,nssv1752910,nssv1752894,nssv1751950,nssv1752901,nssv1752902 M 97 10 0 MTOR HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474152 1 11231910 11231910 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019622 M 9 1 0 MTOR NA18507 nsv516050 1 11295225 11320952 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv665889,nssv700989,nssv701963,nssv683456 M 2026 0 4 "" nsv832536 1 11311364 11484928 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442752 M 95 0 1 PTCHD2 esv3331891 1 11345882 11345892 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863674 M 185 1 0 "" NA12005 esv3329848 1 11356100 11357118 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652037 M 185 1 0 "" NA19240 nsv1002307 1 11388054 11450142 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481323 M 29084 1 0 "" nsv465394 1 11416419 11443240 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541193 M 1557 0 1 "" 1780854097_A nsv545412 1 11416419 11443240 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173671 M 17421 0 1 "" 1780854097_A nsv528438 1 11419581 11424018 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705033 M 2026 0 1 "" nsv2632 1 11459664 11490439 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv298 M 9 1 0 PTCHD2 NA19240 nsv832647 1 11484934 11592183 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442763 M 95 0 1 LOC101929181,PTCHD2 nsv465505 1 11485077 11523706 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541299 M 1557 0 1 PTCHD2 HGDP00857 nsv545413 1 11485077 11523706 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173672 M 17421 0 1 PTCHD2 HGDP00857 dgv107n54 1 11485077 11549445 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545414,nsv545415 M 17421 0 3 PTCHD2 HGDP00787 nsv465727 1 11485077 11549445 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541477 M 1557 0 1 PTCHD2 HGDP00787 nsv470692 1 11497847 11545566 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547697 M 443 1 0 PTCHD2 HGDP00599 nsv521736 1 11500418 11517918 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694500 M 2026 0 1 PTCHD2 esv2628262 1 11504990 11505756 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5205183 M 1 1 0 PTCHD2 NA18507 esv3380219 1 11505035 11505587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808884 M 185 1 0 PTCHD2 NA12878 esv26916 1 11505139 11505609 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13120 M 40 0 1 PTCHD2 NA07045 dgv18n100 1 11509172 11553015 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999027,nsv1000208,nsv1008090,nsv1010644,nsv1006388 M 29084 5 0 PTCHD2 esv3337006 1 11522411 11522430 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678328 M 185 1 0 "" NA12878 esv3309193 1 11522420 11522421 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839434 M 185 1 0 "" NA12878 nsv520251 1 11536855 11549445 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697308 M 2026 0 1 "" nsv545416 1 11602870 11658997 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709935 M 17421 0 1 FBXO2,FBXO44,FBXO6,MAD2L2 esv7758 1 11605249 11605898 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30199 M 1 0 0 "" esv2570682 1 11605279 11606978 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5218562 M 1 0 1 "" NA18507 esv2017403 1 11605301 11605956 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4788047 M 1 0 1 "" NA18507 esv3208 1 11605423 11605899 CNV loss Wang_et_al_2008 18987735 Sequencing essv25649 M 1 0 1 "" YH nsv832758 1 11619670 11759731 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442774 M 95 0 1 AGTRAP,DRAXIN,FBXO2,FBXO44,FBXO6,MAD2L2 nsv515826 1 11633148 11636150 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv664907,nssv655395,nssv660113,nssv673329,nssv682277,nssv682473,nssv674188,nssv679392,nssv681520,nssv683681,nssv666865,nssv693798,nssv685412 M 2026 0 13 FBXO2 nsv545417 1 11633148 11644203 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709936 M 17421 0 1 FBXO2,FBXO44 nsv521468 1 11636150 11639887 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694449 M 2026 0 1 FBXO2,FBXO44 nsv508880 1 11704027 11753907 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619769 M 4 1 0 AGTRAP NA10860 nsv545418 1 11725873 11732113 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709937 M 17421 0 1 AGTRAP nsv545419 1 11730202 11733860 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709938 M 17421 1 0 AGTRAP nsv545420 1 11730557 11733870 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709939 M 17421 0 1 AGTRAP nsv545421 1 11731293 11733261 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709940 M 17421 0 1 AGTRAP dgv108n54 1 11732002 11733860 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545422,nsv545423 M 17421 0 2 AGTRAP nsv518652 1 11780298 11785365 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696101 M 2026 0 1 MTHFR esv2280942 1 11812152 11812473 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4641147 M 1 0 1 CLCN6 NA18507 nsv527521 1 11823412 11832101 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703975 M 2026 0 1 CLCN6,NPPA,NPPA-AS1 nsv517385 1 11851417 11851482 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv653897,nssv669294,nssv681416,nssv656721,nssv673526,nssv690321,nssv652751 M 2026 0 7 "" nsv828475 1 11912209 11915865 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423944 M 31 0 1 "" NA18582 esv22435 1 11912455 11916071 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16673 M 40 0 1 "" NA12414 dgv109n54 1 11913354 11915713 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545425,nsv545424,nsv545426 M 17421 0 4 "" nsv545427 1 11942999 11948942 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709947 M 17421 0 1 PLOD1 dgv110n54 1 11948942 11954069 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545428,nsv545429 M 17421 0 2 PLOD1 nsv545430 1 11953034 11954069 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709950 M 17421 1 0 PLOD1 dgv111n54 1 11953346 11954069 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545431,nsv545432 M 17421 0 3 PLOD1 esv27905 1 11953358 11954096 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17941 M 40 1 0 PLOD1 NA12156 nsv545433 1 11953448 11954069 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709959,nssv709954,nssv709955,nssv709956,nssv709958,nssv709957,nssv709961,nssv709960 M 17421 8 0 PLOD1 nsv545434 1 11953500 11954069 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710001,nssv709979,nssv709964,nssv709978,nssv709962,nssv709963,nssv709969,nssv709971,nssv709965,nssv709968,nssv709967,nssv709977,nssv709966,nssv709970,nssv709973,nssv709972,nssv709975,nssv709974,nssv709976,nssv709989,nssv709981,nssv709980,nssv710000,nssv709984,nssv709985,nssv709982,nssv709983,nssv709988,nssv709986,nssv709987,nssv709992,nssv709991,nssv709990,nssv709993,nssv709996,nssv709995,nssv709994,nssv709997,nssv709998,nssv709999,nssv710003,nssv710002,nssv710004,nssv710007,nssv710006,nssv710005,nssv710009,nssv710008,nssv710010,nssv710011 M 17421 46 4 PLOD1 nsv545435 1 11953500 11954617 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710014,nssv710013,nssv710012 M 17421 3 0 PLOD1 nsv470693 1 11973221 12038278 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547698 M 443 0 1 MFN2,MIIP,MIR6729 HGDP00556 nsv945771 1 11975111 11976839 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753047,nssv1753034,nssv1753021,nssv1752956,nssv1752986,nssv1752977,nssv1753025,nssv1752984,nssv1753006,nssv1752973,nssv1753046,nssv1752969,nssv1753049,nssv1752974,nssv1753001,nssv1752958,nssv1753017,nssv1753041,nssv1753011,nssv1752962,nssv1753016,nssv1753036,nssv1752993,nssv1753037,nssv1752996,nssv1752971,nssv1752999,nssv1752975,nssv1753009,nssv1753042,nssv1753005,nssv1752965,nssv1753019,nssv1752957,nssv1753051,nssv1752970,nssv1752990,nssv1752968,nssv1752955,nssv1753035,nssv1753022,nssv1752987,nssv1752997,nssv1752976,nssv1753045,nssv1752961,nssv1753000,nssv1753039,nssv1753013,nssv1752985,nssv1753008,nssv1753038,nssv1753048,nssv1752980,nssv1753032,nssv1753043,nssv1753026,nssv1752960,nssv1753044,nssv1752978,nssv1752998,nssv1752972,nssv1753004,nssv1752959,nssv1753027,nssv1752963,nssv1753007,nssv1752966,nssv1752994,nssv1752967,nssv1753028,nssv1753040,nssv1753018,nssv1752991,nssv1753010,nssv1753020,nssv1753015,nssv1753024,nssv1753053,nssv1753052,nssv1752983,nssv1752992,nssv1753031,nssv1752981,nssv1753030,nssv1753033,nssv1752982,nssv1753023,nssv1752988,nssv1752989,nssv1752979,nssv1753002,nssv1753029,nssv1753050,nssv1753014,nssv1753012,nssv1753003 M 97 10 0 MFN2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3361336 1 11988844 11988895 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898627,essv8898628,essv8898629 M 185 3 0 MFN2 NA18592,NA18593,NA18948 esv3304719 1 11988858 11988859 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759312,essv7750861,essv7757876 M 185 3 0 MFN2 NA18592,NA18593,NA18948 nsv469830 1 12022313 12182502 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1674860 M 265 0 1 MIR4632,MIR7846,TNFRSF1B,TNFRSF8 esv6101 1 12045052 12045597 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28542 M 1 0 0 "" nsv466060 1 12052638 12064048 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541698 M 1557 0 1 TNFRSF8 1780862021_A nsv545436 1 12052638 12064048 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173674 M 17421 0 1 TNFRSF8 1780862021_A nsv945772 1 12062180 12063847 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753055,nssv1753107,nssv1753071,nssv1753105,nssv1753075,nssv1753129,nssv1753060,nssv1753092,nssv1753067,nssv1753151,nssv1753139,nssv1753125,nssv1753056,nssv1753128,nssv1753072,nssv1753081,nssv1753061,nssv1753098,nssv1753136,nssv1753086,nssv1753137,nssv1753123,nssv1753141,nssv1753148,nssv1753133,nssv1753101,nssv1753073,nssv1753104,nssv1753132,nssv1753120,nssv1753082,nssv1753112,nssv1753135,nssv1753145,nssv1753064,nssv1753131,nssv1753134,nssv1753130,nssv1753057,nssv1753144,nssv1753063,nssv1753143,nssv1753083,nssv1753118,nssv1753069,nssv1753080,nssv1753068,nssv1753114,nssv1753140,nssv1753117,nssv1753078,nssv1753147,nssv1753059,nssv1753099,nssv1753076,nssv1753127,nssv1753070,nssv1753077,nssv1753074,nssv1753119,nssv1753066,nssv1753087,nssv1753085,nssv1753115,nssv1753062,nssv1753149,nssv1753058,nssv1753109,nssv1753065,nssv1753097,nssv1753138,nssv1753111,nssv1753054,nssv1753093,nssv1753106,nssv1753142,nssv1753146,nssv1753088,nssv1753091,nssv1753110,nssv1753122,nssv1753094,nssv1753084,nssv1753102,nssv1753079,nssv1753095,nssv1753113,nssv1753108,nssv1753124,nssv1753103,nssv1753100,nssv1753089,nssv1753116,nssv1753150,nssv1753090,nssv1753121,nssv1753126 M 97 10 0 TNFRSF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv525898 1 12064048 12091110 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702102 M 2026 0 1 TNFRSF8 esv3350116 1 12065621 12065632 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863676 M 185 1 0 TNFRSF8 NA12005 esv1290308 1 12072780 12072878 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4317882 M 2 0 1 TNFRSF8 HuRef nsv508891 1 12080564 12217689 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619770 M 4 1 0 MIR4632,MIR7846,TNFRSF1B,TNFRSF8,VPS13D NA10860 nsv476183 1 12103897 12103897 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013757 M 9 1 0 TNFRSF8 NA12878 esv3584475 1 12117038 12200251 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838752 M 34 1 0 MIR4632,MIR7846,TNFRSF1B,TNFRSF8 2RB nsv945773 1 12118775 12120085 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753180,nssv1754128,nssv1754159,nssv1754144,nssv1753161,nssv1754130,nssv1753153,nssv1754123,nssv1754163,nssv1754165,nssv1753173,nssv1754172,nssv1754156,nssv1754141,nssv1753164,nssv1754113,nssv1753165,nssv1753175,nssv1753169,nssv1753177,nssv1753155,nssv1754135,nssv1753170,nssv1754131,nssv1754154,nssv1754139,nssv1753159,nssv1754151,nssv1753171,nssv1754112,nssv1754155,nssv1754166,nssv1753181,nssv1753179,nssv1754161,nssv1754119,nssv1754157,nssv1754173,nssv1753158,nssv1754129,nssv1754162,nssv1754153,nssv1753168,nssv1754120,nssv1753167,nssv1754137,nssv1753154,nssv1754149,nssv1754160,nssv1754116,nssv1753166,nssv1754132,nssv1753176,nssv1754125,nssv1753157,nssv1754142,nssv1753174,nssv1753178,nssv1753183,nssv1754150,nssv1753163,nssv1754110,nssv1754158,nssv1754138,nssv1753162,nssv1754115,nssv1753172,nssv1754127,nssv1753160,nssv1754114,nssv1753156,nssv1754167,nssv1754117,nssv1754152,nssv1754143,nssv1754118,nssv1754136,nssv1754145,nssv1754133,nssv1754140,nssv1754134,nssv1754109,nssv1754147,nssv1754168,nssv1754124,nssv1754171,nssv1754146,nssv1754169,nssv1754122,nssv1754126,nssv1753152,nssv1754170,nssv1753182,nssv1754111,nssv1754164,nssv1754148,nssv1754108 M 97 10 0 TNFRSF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3439333 1 12121593 12121593 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824952 M 185 1 0 TNFRSF8 NA19240 nsv820293 1 12126165 12126349 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419048 M 2 0 1 TNFRSF8 AK1 nsv471622 1 12137851 12354230 CNV gain+loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550337,nssv550323,nssv550321,nssv550335,nssv550341,nssv550328,nssv550318,nssv550339,nssv550330,nssv550319,nssv550324,nssv550343,nssv550325,nssv550331,nssv550338,nssv550334,nssv550320,nssv550340,nssv550342,nssv550333,nssv550326,nssv550329,nssv550332,nssv550336,nssv550322,nssv550327 M 48 1 25 MIR4632,MIR7846,TNFRSF1B,VPS13D NA10492,NA10494,NA10967,NA10969,NA10970,NA10971,NA10976,NA10979,NA11776,NA15724,NA15725,NA15726,NA15727,NA15728,NA15730,NA15732,NA15733,NA16688,NA17014,NA17015,NA17017,NA17020,NA17051,NA17052,NA17059,P86GA nsv527024 1 12146826 12189852 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703399 M 2026 0 1 MIR4632,MIR7846,TNFRSF1B nsv545437 1 12163411 12166845 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710015 M 17421 0 1 TNFRSF1B dgv112n54 1 12165346 12168762 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545439,nsv545438 M 17421 0 4 TNFRSF1B dgv113n54 1 12166845 12171607 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545440,nsv545441 M 17421 0 2 TNFRSF1B esv275384 1 12276894 12279663 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585374 M 1250 0 1 VPS13D nsv517848 1 12296335 12564830 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695253 M 2026 1 0 DHRS3,MIR6730,SNORA59A,SNORA59B,VPS13D nsv2743 1 12315193 12360087 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7522 M 9 0 1 VPS13D NA12156 nsv2854 1 12393279 12438696 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6975 M 9 0 1 VPS13D NA12156 nsv528439 1 12425014 12429547 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705034 M 2026 0 1 VPS13D nsv817617 1 12431530 12456055 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417810 M 112 0 1 VPS13D NA18853 esv2758922 1 12521755 13749642 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757724,esv2756835 M 270 34 25 AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,HNRNPCP5,LOC649330,LRRC38,MIR6730,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA07000,NA07345,NA07348,NA10831,NA10838,NA10847,NA10851,NA10854,NA10857,NA12004,NA12044,NA12057,NA12239,NA12249,NA12717,NA12752,NA12753,NA12761,NA12762,NA12763,NA12873,NA12874,NA18515,NA18532,NA18552,NA18593,NA18609,NA18611,NA18622,NA18624,NA18861,NA18863,NA18949,NA18951,NA18953,NA18961,NA18965,NA18967,NA18969,NA18970,NA18981,NA18990,NA18991,NA18995,NA18997,NA19007,NA19092,NA19094,NA19103,NA19119,NA19120,NA19127,NA19129,NA19154,NA19159,NA19161,NA19171,NA19173 nsv521737 1 12522009 12607424 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694501 M 2026 0 1 DHRS3,MIR6730 nsv466172 1 12547688 12592983 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541787 M 1557 0 1 DHRS3,MIR6730 NINDS_71 nsv545442 1 12547688 12592983 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173675 M 17421 0 1 DHRS3,MIR6730 NINDS_71 nsv466283 1 12547688 12607424 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541870 M 1557 1 0 DHRS3,MIR6730 HGDP00259 nsv545443 1 12547688 12607424 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173676 M 17421 1 0 DHRS3,MIR6730 HGDP00259 esv3310510 1 12548197 12548208 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843569 M 185 1 0 "" NA19240 esv3379200 1 12548198 12548208 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740934 M 185 1 0 "" NA19240 nsv1011540 1 12584222 12814884 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472793 M 29084 0 1 AADACL3,AADACL4,C1orf158,DHRS3,PRAMEF1,PRAMEF11,PRAMEF12 nsv475178 1 12587987 12587987 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011930 M 9 1 0 DHRS3 NA19240 nsv475134 1 12588043 12588043 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019533 M 9 1 0 DHRS3 NA19240 nsv428410 1 12596978 13667714 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv454165,nssv454176,nssv453130,nssv454232,nssv454154,nssv454243,nssv454221 M 62 6 1 AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 HGDP00450,HGDP00462,HGDP00463,HGDP00473,NA18916,NA19096,NA19189 nsv515525 1 12641798 12645771 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv663825,nssv687835,nssv655876,nssv691346 M 2026 0 4 AADACL4 nsv8657 1 12665734 12670547 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv28045,nssv12449 M 31 0 2 "" NA18853,NA19173 esv1936135 1 12665880 12669324 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4851711 M 1 0 1 "" NA18507 esv3302784 1 12669288 12674642 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7737228,essv7733193,essv7734122,essv7732052 M 185 4 0 "" NA18498,NA18507,NA18522,NA18853 nsv545444 1 12670458 12710219 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710022 M 17421 0 1 AADACL3 nsv999658 1 12691549 12781988 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3462862 M 29084 1 0 AADACL3,C1orf158,PRAMEF1,PRAMEF12 nsv466394 1 12697586 12836483 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541946 M 1557 1 0 AADACL3,C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00153 nsv545445 1 12697586 12836483 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173677 M 17421 1 0 AADACL3,C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00153 nsv1000876 1 12729359 12768438 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464831 M 29084 1 0 C1orf158,PRAMEF12 dgv19n100 1 12729359 12784912 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005569,nsv1008869,nsv1001619,nsv1000875 M 29084 0 6 C1orf158,PRAMEF1,PRAMEF12 nsv832869 1 12730060 12941777 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442796,nssv1442785 M 95 1 1 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv470695 1 12743457 12836482 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547699,nssv547702,nssv547703,nssv547700 M 443 0 4 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00694,HGDP00702,HGDP00988,HGDP01366 nsv528703 1 12743457 12836483 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705350 M 2026 0 1 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 esv993047 1 12744887 12745098 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566471 M 3 0 1 "" HuRef dgv114n54 1 12746810 12834675 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545448,nsv545446 M 17421 2 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1798860570_A nsv998321 1 12754068 13081658 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478915 M 29084 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 dgv115n54 1 12756840 12805718 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545447,nsv545453 M 17421 0 3 PRAMEF1,PRAMEF12 dgv5n27 1 12756840 12836483 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466505,nsv466727 M 1557 2 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1798860570_A,HGDP00007 dgv116n54 1 12756840 12841261 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545451,nsv545450,nsv545454,nsv545449 M 17421 0 5 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 HGDP00952,HGDP00988 dgv20n100 1 12757155 12840666 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007497,nsv1000550,nsv1008631,nsv1009348,nsv1014276,nsv1004963,nsv1001595,nsv1014734 M 29084 0 16 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 nsv945774 1 12757503 12883938 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754198,nssv1754206,nssv1754254,nssv1754249,nssv1754194,nssv1754251,nssv1754257,nssv1754211,nssv1754175,nssv1754174,nssv1754195,nssv1754204,nssv1754261,nssv1754262,nssv1754202,nssv1754224,nssv1754203,nssv1754270,nssv1754259,nssv1754263,nssv1754260,nssv1754220,nssv1754191,nssv1754219,nssv1754179,nssv1754242,nssv1754188,nssv1754239,nssv1754193,nssv1754233,nssv1754178,nssv1754246,nssv1754186,nssv1754200,nssv1754176,nssv1754268,nssv1754190,nssv1754226,nssv1754181,nssv1754209,nssv1754180,nssv1754237,nssv1754185,nssv1754264,nssv1754192,nssv1754271,nssv1754255,nssv1754201,nssv1754177,nssv1754235,nssv1754196,nssv1754208,nssv1754205,nssv1754197,nssv1754187,nssv1754217,nssv1754189,nssv1754243,nssv1754184,nssv1754227,nssv1754258,nssv1754199,nssv1754182,nssv1754240,nssv1754256,nssv1754229,nssv1754253,nssv1754214,nssv1754183,nssv1754247,nssv1754252,nssv1754223,nssv1754234,nssv1754210,nssv1754212,nssv1754228,nssv1754248,nssv1754236,nssv1754241,nssv1754245,nssv1754215,nssv1754218,nssv1754230,nssv1754231,nssv1754267,nssv1754269,nssv1754265,nssv1754250,nssv1754225,nssv1754266,nssv1754244,nssv1754207,nssv1754232,nssv1754221,nssv1754238,nssv1754216,nssv1754213 M 97 10 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv6n27 1 12758455 12836483 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466838,nsv466949,nsv466616 M 1557 0 3 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1780862077_A,HGDP00952,HGDP01366 dgv117n54 1 12758455 12841261 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545456,nsv545452 M 17421 3 4 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 1780862077_A,HGDP00007,HGDP01366 dgv21n100 1 12758455 12938082 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002288,nsv1006273,nsv998530,nsv998681,nsv1006654,nsv997632,nsv1011809,nsv1000920,nsv1010745 M 29084 0 72 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv517190 1 12758455 13648417 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv659765,nssv681352,nssv660725,nssv655298,nssv705370,nssv674765,nssv659477,nssv691789,nssv683316,nssv656069,nssv675460,nssv668984,nssv690145,nssv669367,nssv687685,nssv666273,nssv662340,nssv680385,nssv676136,nssv675328,nssv688922,nssv689950,nssv674582,nssv664467,nssv661007,nssv658961,nssv688036,nssv670277,nssv669316,nssv685626,nssv663875,nssv664702,nssv659030,nssv678527,nssv680870,nssv678613,nssv658370,nssv672363,nssv671841,nssv680570,nssv658040,nssv678933,nssv665485,nssv680445,nssv690595,nssv672026,nssv674814,nssv677586,nssv702090,nssv688196,nssv655601,nssv692088,nssv681241,nssv653971,nssv683850,nssv685508,nssv676168,nssv660425,nssv668625,nssv670769,nssv655162,nssv681069,nssv687277,nssv684041,nssv652446,nssv680419,nssv658218,nssv651901,nssv663203,nssv660049,nssv654351,nssv659462,nssv688182,nssv664297,nssv670301,nssv652055,nssv654248,nssv662290,nssv692526,nssv676530,nssv688711,nssv662916,nssv652682,nssv676529,nssv677999,nssv687198,nssv684928,nssv682789,nssv675204,nssv662505,nssv660265 M 2026 21 70 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 dgv22n100 1 12759029 13344520 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005952,nsv1004545,nsv1000037,nsv1014205,nsv1000597,nsv998433,nsv1007258,nsv1011355,nsv1007272,nsv1009800,nsv997273,nsv1007972 M 29084 13 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF15,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 dgv23n100 1 12760427 12805671 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009173,nsv1010693,nsv1006151,nsv998824,nsv1005803 M 29084 0 52 PRAMEF1,PRAMEF12 esv2763769 1 12760427 13744529 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6992522,essv6993966,essv6992633,essv6992411,essv6992855,essv6992078,essv6994078,essv6993300,essv7032856,essv6992189,essv7033078,essv6991411,essv6991078,essv6991300,essv7033189,essv6993078,essv7033300,essv6993189,essv6990967,essv6991967,essv6993522,essv6994300,essv6991856,essv6992967,essv6992300,essv7032745,essv6990856,essv6993411,essv6993633,essv6994189,essv6993744,essv6990745,essv7032967,essv6991744,essv6991633,essv6991522,essv6991189,essv6993855,essv6992744 M 1109 6 32 HNRNPCL1,HNRNPCP5,LOC649330,LRRC38,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 SW_0018,SW_0029,SW_0044,SW_0048,SW_0144,SW_0338,SW_0379,SW_0576,SW_0580,SW_0585,SW_0647,SW_0758,SW_0789,SW_0805,SW_0817,SW_0859,SW_0888,SW_0890,SW_0892,SW_1029,SW_1056,SW_1070,SW_1088,SW_1095,SW_1118,SW_1170,SW_1172,SW_1198,SW_1203,SW_1215,SW_1244,SW_1263,SW_1283,SW_1356,SW_1428,SW_1460,SW_1470,SW_1509 dgv24n100 1 12761319 12814884 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998574,nsv1002449 M 29084 0 3 PRAMEF1,PRAMEF11 dgv25n100 1 12761319 13109945 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998901,nsv1007137,nsv1001463,nsv997840 M 29084 0 5 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 dgv26n100 1 12761319 13344520 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010963,nsv1012212,nsv999070,nsv1005987,nsv1014048,nsv1013182,nsv1003480,nsv1008135,nsv1000469 M 29084 32 36 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF15,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 esv2764212 1 12761331 13109957 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004974,essv7005004,essv7004996,essv7004997,essv7005001,essv7004986,essv7004981,essv7004971,essv7004983,essv7004976,essv7004993,essv7004972,essv7004995,essv7004988,essv7004982,essv7004994,essv7004990,essv7004992,essv7004964,essv7004973,essv7004963,essv7004977,essv7005003,essv7004962,essv7004991,essv7004987,essv7004965,essv7004999,essv7004980,essv7004961,essv7004969,essv7005002,essv7004985,essv7004998,essv7004970,essv7004984,essv7004979,essv7004968,essv7004975 M 1109 4 32 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 RW_0004,RW_0021,RW_0033,RW_0045,RW_0084,RW_0116,RW_0139,RW_0140,RW_0147,RW_0169,RW_0189,RW_0190,RW_0193,RW_0196,RW_0216,RW_0223,RW_0232,RW_0237,RW_0249,RW_0254,RW_0266,RW_0269,RW_0319,RW_0325,RW_0515,RW_0521,RW_0539,RW_0540,RW_0543,RW_0544,RW_0552,RW_0604,RW_0607,RW_0612,RW_0636 nsv821559 1 12762564 12815652 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1421068 M 1 1 0 PRAMEF1,PRAMEF11 NA10851 dgv13n67 1 12762564 12832142 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv828586,nsv828697 M 31 0 2 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 AK20,NA18969 nsv471539 1 12762846 12787958 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547949,nssv547950,nssv547951 M 3 3 0 PRAMEF1 JDW,NA18507,YH esv28644 1 12763195 12975525 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13103,esv15812,esv19152,esv18407,esv11373,esv13474,esv21420,esv16532,esv16950,esv20242,esv11679,esv12552,esv11323,esv15024,esv18833 M 40 36 11 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv990214 1 12764394 12873662 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586626 M 3 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 HuRef esv3584586 1 12764515 12805683 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838624 M 34 0 1 PRAMEF1 3LK esv2421662 1 12764515 12894420 OTHER complex Altshuler_et_al_2010 20811451 SNP array essv5038349,essv5104297,essv5013828,essv5107947,essv5039373,essv5098165,essv5067055,essv5098033,essv5102370,essv5029580,essv5120396,essv5159736,essv5132926,essv5009132,essv5025654,essv5116203,essv5144838,essv5022261,essv5106036,essv5122638,essv5049008,essv5059824,essv5057726,essv5140930,essv5109453,essv5041350,essv5018496,essv5109420,essv5140420,essv5009774,essv5066353,essv5122668,essv5131081,essv5003555,essv5102257,essv5082781,essv5053532,essv5061766,essv5050218,essv5051593,essv5034347,essv5115604,essv5065514,essv5072990,essv5024352,essv5077663,essv5061594,essv5111327,essv5023516,essv5024400,essv5027197,essv5121017,essv5089601,essv5018867,essv5030453,essv5006338,essv5088719,essv5089177,essv5114531,essv5040953,essv5117560,essv5038935,essv5159266,essv5116223,essv5143438,essv5150257,essv5124804,essv5139478,essv5102044,essv5040928,essv5074962,essv5018478,essv5048343,essv5128528,essv5129922,essv5073546,essv5116865,essv5097924,essv5138370,essv5053293,essv5134010,essv5133462,essv5098485,essv5064090,essv5084483,essv5068309,essv5017667,essv5109345,essv5115549,essv5012238 M 1184 20 70 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA10838,NA10847,NA10853,NA11891,NA11918,NA12044,NA12344,NA12375,NA12383,NA12546,NA12718,NA12753,NA12763,NA12874,NA17962,NA17965,NA17974,NA17996,NA18109,NA18135,NA18144,NA18161,NA18555,NA18559,NA18593,NA18611,NA18614,NA18617,NA18622,NA18624,NA18702,NA18863,NA18923,NA18924,NA18925,NA18951,NA18955,NA18963,NA18965,NA18969,NA18981,NA18990,NA18991,NA19066,NA19083,NA19103,NA19236,NA19313,NA19334,NA19390,NA19436,NA19468,NA19681,NA19683,NA19720,NA19721,NA19747,NA19748,NA19770,NA19789,NA19908,NA19914,NA19915,NA19919,NA20337,NA20542,NA20810,NA20818,NA20828,NA20887,NA21088,NA21102,NA21111,NA21119,NA21144,NA21316,NA21317,NA21318,NA21364,NA21367,NA21381,NA21383,NA21414,NA21512,NA21519,NA21596,NA21635,NA21636,NA21740,NA21784 esv3584589 1 12764515 13249634 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9837920 M 34 0 1 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 KSF005 nsv1008195 1 12768438 12790541 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467162,nssv3477814,nssv3697900,nssv3697899,nssv3480488 M 29084 1 4 PRAMEF1 dgv27n100 1 12768438 12840666 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006973,nsv1007443,nsv1010457,nsv1009423,nsv1005285,nsv1004265,nsv1012040 M 29084 13 111 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 dgv28n100 1 12768438 12938082 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012081,nsv1003633,nsv998447,nsv1000098 M 29084 12 73 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 dgv29n100 1 12768438 13081658 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008882,nsv1008555,nsv1013855 M 29084 5 8 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 dgv30n100 1 12768438 13344279 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011638,nsv1013726,nsv1010904,nsv1008901,nsv1009318,nsv1002694,nsv998466,nsv1004453,nsv1011289,nsv1002325,nsv998870,nsv999517,nsv1013772,nsv1001817,nsv1000258,nsv1002421 M 29084 0 28 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF15,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 dgv31n100 1 12768438 13590399 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005187,nsv999913,nsv1006435 M 29084 3 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 nsv442270 1 12768450 12805683 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1618113,nssv1618202,nssv1618135,nssv1618213,nssv1616614,nssv1618024,nssv1617924,nssv1618146,nssv1617969,nssv1618080,nssv1618002,nssv1618246,nssv1618091,nssv1618069,nssv1616625,nssv1618257,nssv1617991,nssv1617935,nssv1618124,nssv1618013,nssv1618102,nssv1618169,nssv1617958,nssv1618035,nssv1618058,nssv1616647,nssv1618191,nssv1618235,nssv1617947,nssv1618157,nssv1617913,nssv1618224,nssv1617980,nssv1618268,nssv1618180,nssv1616636,nssv1618046 M 270 9 28 PRAMEF1 NA07019,NA07056,NA10838,NA10857,NA12004,NA12044,NA12753,NA12763,NA12815,NA12865,NA12874,NA18529,NA18555,NA18582,NA18593,NA18603,NA18611,NA18621,NA18622,NA18624,NA18635,NA18861,NA18863,NA18947,NA18951,NA18965,NA18969,NA18978,NA18981,NA18990,NA18991,NA18995,NA18997,NA19000,NA19092,NA19094,NA19103 nsv8768 1 12768742 13390175 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv28042,nssv12099,nssv28933,nssv28039,nssv12120,nssv12096,nssv29258,nssv28545,nssv11776,nssv28554,nssv28937,nssv29277,nssv28929,nssv11774,nssv28049,nssv28920,nssv29267,nssv26897,nssv12438,nssv13414,nssv28944,nssv11775,nssv28543,nssv28935,nssv11764,nssv28056,nssv12111,nssv11772,nssv11790,nssv12765,nssv26901,nssv28540,nssv12752,nssv28927,nssv28541,nssv28032,nssv28544,nssv29265,nssv12767,nssv28047,nssv26895,nssv13744,nssv29250,nssv29263,nssv29257,nssv12101,nssv28539,nssv12108,nssv29264,nssv12112,nssv24599,nssv13753,nssv29269,nssv29259,nssv28550,nssv28036,nssv29249,nssv29275,nssv12439,nssv26899,nssv28035,nssv26881,nssv26898,nssv29274,nssv14074,nssv13429,nssv28943,nssv26891,nssv12093,nssv26880,nssv28931,nssv28560,nssv11781,nssv14083,nssv28936,nssv28050,nssv28053,nssv28040,nssv11777,nssv12780,nssv11780,nssv12433,nssv29266,nssv28549,nssv12769,nssv14429,nssv28934,nssv12435,nssv13093,nssv21451,nssv11783,nssv11771,nssv12094,nssv29271,nssv24616,nssv26883,nssv24598,nssv28559,nssv28557,nssv12113,nssv28033,nssv28556,nssv12443,nssv28932,nssv28043,nssv13428,nssv12121,nssv14099,nssv29262,nssv28555,nssv12773,nssv28941,nssv12092,nssv28945,nssv13103,nssv28553,nssv28939,nssv12426,nssv12424,nssv29278,nssv12429,nssv13433,nssv14423,nssv28546,nssv29253,nssv28948,nssv24622,nssv28547,nssv11769,nssv12441,nssv13763,nssv28928,nssv11762,nssv13099,nssv21427,nssv28923,nssv12437,nssv28041,nssv13769,nssv14093,nssv11778,nssv14753,nssv26904,nssv12450,nssv13098,nssv28938,nssv12103,nssv26878,nssv15113,nssv11791,nssv12105,nssv26890,nssv12763,nssv11779,nssv28947,nssv12754,nssv29256,nssv12779,nssv11766,nssv12109,nssv29261,nssv13439,nssv12422,nssv11770,nssv11763,nssv11782,nssv13109,nssv28551,nssv13423,nssv13084,nssv28051,nssv28531,nssv12768,nssv28919,nssv29268,nssv12107 M 31 30 19 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 dgv14n67 1 12769321 12842627 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829030,nsv828808 M 31 2 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 AK2,NA18997 esv32750 1 12769531 13065155 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv101326,essv99068,essv97675,essv96818,essv97209,essv98305,essv95436,essv95313,essv93282,essv97562,essv100556,essv94766,essv94614,essv98419,essv92784,essv96954,essv96441,essv95060,essv100225,essv93105,essv97952,essv96187,essv92594,essv101537,essv96690,essv97426,essv100377,essv95661,essv99314,essv99649,essv95999,essv94423,essv92841,essv100986,essv96257,essv95868,essv101177 M 51 37 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 21603,21616,21618,21659,21693,21721,21772,21791,21805,21808,21817,21837,21841,21847,21863,21872,21879,21911,21932,21938,21939,21944,22007,22011,22075,22127,22170,22217,22233,22261,22275,22278,22286,22298,22300,22352,22371 dgv118n54 1 12769585 12810136 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545459,nsv545455 M 17421 2 0 PRAMEF1,PRAMEF11 nsv545457 1 12769585 12876330 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710035 M 17421 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 esv3891192 1 12773129 12845198 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25787908,essv25791015,essv25781694,essv25797277,essv25786482,essv25780439,essv25781141,essv25786662,essv25798427,essv25790751,essv25799286,essv25789100,essv25787366,essv25797430,essv25801663,essv25796353,essv25789138,essv25790602,essv25800091,essv25798459,essv25790776,essv25779746,essv25792802,essv25789560,essv25791041,essv25790643,essv25787494,essv25787832,essv25787995,essv25800334,essv25796240,essv25791057 M 3017 14 18 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 esv3891748 1 12773129 12883606 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25798021,essv25788182,essv25796445,essv25788080 M 3017 2 2 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 nsv1008359 1 12775335 12790412 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477341 M 29084 1 0 PRAMEF1 nsv1004622 1 12775335 12790541 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3697974,nssv3697973 M 29084 0 2 PRAMEF1 dgv119n54 1 12775335 12810136 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545460,nsv545458 M 17421 0 2 PRAMEF1,PRAMEF11 dgv32n100 1 12775335 12814884 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009315,nsv1014011,nsv1005421,nsv1010023,nsv1003521 M 29084 0 19 PRAMEF1,PRAMEF11 nsv1006524 1 12775335 12814884 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464724,nssv3481657,nssv3466020,nssv3472344,nssv3471824,nssv3465603,nssv3697978 M 29084 1 6 PRAMEF1,PRAMEF11 dgv33n100 1 12775335 12838434 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010518,nsv1014677,nsv1011031,nsv1014357,nsv1005021,nsv1009225,nsv1000846,nsv1014153 M 29084 0 32 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 dgv120n54 1 12775459 12845198 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545476,nsv545463,nsv545461,nsv545471,nsv545475 M 17421 0 11 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 dgv15n67 1 12776279 12820751 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv829141,nsv828919 M 31 0 2 PRAMEF1,PRAMEF11 AK6,NA18951 esv3891525 1 12777429 12789177 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25784285,essv25784405 M 3017 0 2 PRAMEF1 esv3891303 1 12777429 12821696 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25784694,essv25784759,essv25789118,essv25783416,essv25788805,essv25781234,essv25800612,essv25800866,essv25786075,essv25788571,essv25782822,essv25789505 M 3017 4 8 PRAMEF1,PRAMEF11 nsv545462 1 12777429 12834675 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710040 M 17421 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 esv3891414 1 12777429 12973925 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25797433,essv25792878,essv25797241,essv25788937,essv25796029,essv25796483,essv25797208 M 3017 2 5 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv1001422 1 12780450 12790541 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466853 M 29084 1 0 "" esv3584476 1 12780450 12814896 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838580 M 34 1 0 PRAMEF11 OA020 nsv438192 1 12783336 12790824 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468518,nssv468629 M 269 0 2 "" NA19101,NA19103 dgv121n54 1 12783336 12793914 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545474,nsv545464 M 17421 0 3 "" dgv122n54 1 12783336 12802943 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545466,nsv545465 M 17421 0 6 "" HGDP00702,HGDP00999,HGDP01254,HGDP01269 dgv7n27 1 12783336 12802943 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467171,nsv467283,nsv467394,nsv467505 M 1557 0 4 "" HGDP00702,HGDP00999,HGDP01254,HGDP01269 nsv545467 1 12783336 12805718 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710049,nssv710047,nssv710048 M 17421 2 1 "" nsv470696 1 12783336 12836482 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547704,nssv547706,nssv547708,nssv547705,nssv547707 M 443 5 0 HNRNPCL1,LOC649330,PRAMEF11 HGDP00072,HGDP00560,HGDP00572,HGDP00714,HGDP01317 dgv123n54 1 12783336 12836483 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545480,nsv545470,nsv545485,nsv545469 M 17421 37 63 HNRNPCL1,LOC649330,PRAMEF11 1780846321_A,1780854128_A,1780854216_A,1780854260_A,1780854261_A,1780854362_A,1780862085_A,1780862294_A,1782681216_A,1798860565_A,HGDP00021,HGDP00072,HGDP00262,HGDP00364,HGDP00560,HGDP00572,HGDP00694,HGDP00707,HGDP00714,HGDP00751,HGDP00856,HGDP00869,HGDP00945,HGDP00950,HGDP01103,HGDP01251,HGDP01306,HGDP01317,HGDP01352,HGDP01372,HGDP01399,HGDP01400,NINDS_109,NINDS_117,NINDS_134,NINDS_182,NINDS_198,NINDS_208,NINDS_219,NINDS_240,NINDS_253,NINDS_258,NINDS_266,NINDS_27,NINDS_50,NINDS_70,NINDS_83,NINDS_90 dgv8n27 1 12783336 12836483 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv456551,nsv460206,nsv456885,nsv469171,nsv455996,nsv457773,nsv469393,nsv460039,nsv458551,nsv456218,nsv468616,nsv460284,nsv460050,nsv460217,nsv457440,nsv455885,nsv458996,nsv460317,nsv460195,nsv460062,nsv459440,nsv460073,nsv468838,nsv457662,nsv460306,nsv460295,nsv459662,nsv460084,nsv456440,nsv458662,nsv457996,nsv460228,nsv460095,nsv458884,nsv460117,nsv459329,nsv457551,nsv460250,nsv460173,nsv460239,nsv460128,nsv460328,nsv456107,nsv468727,nsv459551,nsv456774,nsv455774,nsv460161,nsv460150,nsv460339,nsv456662,nsv460139,nsv458107,nsv467616,nsv457329,nsv457218,nsv457885,nsv459218,nsv458773,nsv456996,nsv460006,nsv456329,nsv460017,nsv467727,nsv458329,nsv460028,nsv460261,nsv459107,nsv458440,nsv460184,nsv468505 M 1557 0 71 HNRNPCL1,LOC649330,PRAMEF11 1780854095_A,1780854216_A,1780854341_A,1780854357_A,1780854384_A,1780862015_A,1780862229_A,1780862250_A,1780862263_A,1780862346_A,1780862390_A,1780862574_A,1782681236_A,1782681287_A,1787431167_A,1798860277_A,HGDP00106,HGDP00169,HGDP00251,HGDP00267,HGDP00279,HGDP00285,HGDP00351,HGDP00364,HGDP00423,HGDP00694,HGDP00732,HGDP00748,HGDP00751,HGDP00780,HGDP00781,HGDP00791,HGDP00813,HGDP00856,HGDP00869,HGDP00896,HGDP00945,HGDP00950,HGDP00964,HGDP01003,HGDP01010,HGDP01191,HGDP01296,HGDP01306,HGDP01321,HGDP01330,HGDP01338,HGDP01352,HGDP01360,HGDP01361,HGDP01363,HGDP01368,HGDP01369,HGDP01372,HGDP01375,HGDP01400,NINDS_109,NINDS_117,NINDS_134,NINDS_182,NINDS_198,NINDS_219,NINDS_240,NINDS_253,NINDS_258,NINDS_266,NINDS_27,NINDS_50,NINDS_70,NINDS_83,NINDS_90 dgv9n27 1 12783336 12836483 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv459884,nsv460272,nsv467949,nsv457107,nsv468394,nsv468282,nsv459939,nsv458218,nsv459951,nsv460106,nsv468171,nsv468949,nsv459773,nsv459962,nsv459995,nsv459973,nsv459984,nsv468060,nsv455663,nsv469282,nsv469060,nsv467838 M 1557 22 0 HNRNPCL1,LOC649330,PRAMEF11 1780846321_A,1780854128_A,1780854260_A,1780854261_A,1780854362_A,1780862085_A,1780862294_A,1780862487_A,1782681216_A,1798860565_A,HGDP00021,HGDP00072,HGDP00262,HGDP00560,HGDP00572,HGDP00714,HGDP01033,HGDP01103,HGDP01251,HGDP01317,HGDP01399,NINDS_208 nsv817728 1 12783336 12836483 CNV gain+loss Wang_et_al_2007 17921354 SNP array nssv1418336,nssv1417095,nssv1417408,nssv1418245,nssv1418244,nssv1418338 M 112 4 2 HNRNPCL1,LOC649330,PRAMEF11 NA10847,NA12239,NA18529,NA18951,NA19092,NA19094 dgv124n54 1 12783336 12845198 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545491,nsv545468,nsv545481,nsv545495,nsv545488,nsv545494,nsv545497,nsv545479,nsv545492,nsv545496,nsv545493,nsv545478,nsv545487,nsv545483,nsv545484 M 17421 0 27 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 1780854357_A,1787431167_A,HGDP00169,HGDP00423,HGDP00709,HGDP00732,HGDP00791,HGDP01003,HGDP01010,HGDP01016,HGDP01296,HGDP01338,HGDP01368 dgv125n54 1 12783336 12973925 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545473,nsv545472 M 17421 0 2 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv1002419 1 12784816 12840666 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481472 M 29084 1 0 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 nsv999194 1 12784906 12938082 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479949 M 29084 1 0 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 dgv126n54 1 12788507 12802943 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545477,nsv545482 M 17421 0 2 "" dgv1n64 1 12788507 12836483 CNV loss Wang_et_al_2007 17921354 SNP array nsv817839,nsv818045,nsv817950 M 112 0 6 HNRNPCL1,LOC649330,PRAMEF11 NA10857,NA12044,NA12865,NA12874,NA18593,NA18965 esv3891859 1 12788507 13252464 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788920 M 3017 1 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 nsv545486 1 12789655 12810136 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710118 M 17421 0 1 PRAMEF11 nsv1010920 1 12789665 12840666 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3698764,nssv3481473,nssv3698766,nssv3698765,nssv3476599,nssv3468483,nssv3476760,nssv3463893,nssv3481731,nssv3465681,nssv3479801,nssv3465684 M 29084 2 10 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 nsv829252 1 12789721 12790323 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440800 M 31 0 1 "" NA18969 nsv2965 1 12793128 13108493 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10340,nssv5045,nssv9308,nssv3620 M 9 0 4 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA12878,NA18517,NA18956,NA19129 nsv829363 1 12793527 12795558 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440801 M 31 0 1 "" NA18969 nsv545489 1 12793914 12802943 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710121,nssv710120 M 17421 0 2 "" nsv545490 1 12793914 12822321 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710122 M 17421 0 1 PRAMEF11 dgv127n54 1 12798011 12841654 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545498,nsv545500,nsv545499,nsv545502,nsv545501 M 17421 0 13 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 HGDP00662 esv1063166 1 12798812 12798812 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4300681 M 2 1 0 "" HuRef nsv7172 1 12802281 13249729 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7150,nssv7060,nssv11101,nssv5213,nssv5286,nssv10379,nssv9624,nssv9625,nssv2496,nssv11168,nssv3714,nssv382,nssv6080,nssv10403,nssv9329,nssv5133 M 9 0 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv460350 1 12802740 12836483 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536942 M 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 HGDP00662 dgv128n54 1 12802740 13048325 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545503,nsv545505 M 17421 0 2 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 nsv433182 1 12802943 12883614 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463063 M 9 0 1 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA15510 esv3428728 1 12812752 12815550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691774 M 185 1 0 PRAMEF11 NA12878 dgv129n54 1 12813348 12937470 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545504,nsv545516,nsv545526,nsv545508,nsv545517 M 17421 0 6 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv820528 1 12815653 12969918 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1419881 M 1 0 1 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA10851 nsv436469 1 12815837 12871344 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466583 M 2 0 1 HNRNPCL1,LOC649330,PRAMEF2,PRAMEF4 NA18505 dgv130n54 1 12817106 12846549 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545506,nsv545507 M 17421 0 3 HNRNPCL1,LOC649330,PRAMEF2 esv3338113 1 12817339 13105934 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808895 M 185 0 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA12878 dgv16n67 1 12820351 12842775 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829426,nsv829437,nsv829459,nsv829448 M 31 7 0 HNRNPCL1,LOC649330,PRAMEF2 AK10,NA18526,NA18564,NA18570,NA18947,NA18949,NA18972 dgv131n54 1 12822321 12847199 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545512,nsv545511,nsv545515,nsv545513,nsv545514,nsv545509,nsv545510 M 17421 0 38 HNRNPCL1,LOC649330,PRAMEF2 nsv819147 1 12826587 13093905 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418797 M 2 1 0 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 AK1 nsv821616 1 12826893 13583802 CNV gain Sebat_et_al_2004 15273396 ROMA nssv1421290,nssv1421179,nssv1421374,nssv1421352,nssv1421363,nssv1421341 M 31 6 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 nsv442514 1 12831824 12849694 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617080,nssv1616802,nssv1616858,nssv1616824,nssv1617091,nssv1617280,nssv1617069,nssv1616969,nssv1616924,nssv1617035,nssv1617058,nssv1616780,nssv1616980,nssv1616725,nssv1617102,nssv1616713,nssv1617257,nssv1617013,nssv1617246,nssv1617046,nssv1617202,nssv1617224,nssv1617002,nssv1616658,nssv1616813,nssv1616736,nssv1617235,nssv1617302,nssv1616791,nssv1616836,nssv1617157,nssv1617213,nssv1616702,nssv1617024,nssv1617191,nssv1617124,nssv1616947,nssv1616880,nssv1616991,nssv1616769,nssv1616891,nssv1616747,nssv1616680,nssv1616669,nssv1617169,nssv1616691,nssv1616902,nssv1616869,nssv1616958,nssv1617146,nssv1617113,nssv1617180,nssv1617268,nssv1617313,nssv1616847,nssv1616913,nssv1617135,nssv1616935,nssv1616758,nssv1617291 M 270 31 29 PRAMEF2 NA06994,NA07345,NA07348,NA10838,NA10847,NA10851,NA10857,NA12003,NA12004,NA12044,NA12057,NA12239,NA12717,NA12751,NA12753,NA12763,NA12815,NA12864,NA12865,NA12873,NA12874,NA12875,NA18501,NA18506,NA18508,NA18526,NA18550,NA18563,NA18564,NA18566,NA18570,NA18593,NA18609,NA18611,NA18612,NA18622,NA18636,NA18861,NA18863,NA18940,NA18949,NA18951,NA18952,NA18964,NA18965,NA18969,NA18971,NA18972,NA18981,NA18991,NA18992,NA18997,NA18998,NA19005,NA19092,NA19103,NA19116,NA19127,NA19129,NA19222 dgv132n54 1 12831826 12843697 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545519,nsv545518,nsv545522,nsv545525 M 17421 0 4 PRAMEF2 dgv10n27 1 12833787 12836483 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460383,nsv460428,nsv460395,nsv460406,nsv460417,nsv460439,nsv460450,nsv460461,nsv460472,nsv460361,nsv460372 M 1557 0 11 "" HGDP00467,HGDP00541,HGDP00702,HGDP00832,HGDP00837,HGDP00846,HGDP00849,HGDP00876,HGDP00984,HGDP00995,HGDP00999 nsv545520 1 12833787 12836483 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173752,nssv1173753,nssv1173754,nssv1173755,nssv1173756,nssv1173757,nssv1173758,nssv1173759,nssv1173761,nssv1173760,nssv1173762,nssv1173763,nssv1173750,nssv1173765,nssv1173751,nssv1173764,nssv1173766,nssv1173767 M 17421 0 18 "" HGDP00467,HGDP00541,HGDP00702,HGDP00830,HGDP00832,HGDP00833,HGDP00834,HGDP00837,HGDP00844,HGDP00846,HGDP00847,HGDP00848,HGDP00849,HGDP00850,HGDP00876,HGDP00984,HGDP00995,HGDP00999 dgv133n54 1 12833787 12842021 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545523,nsv545521,nsv545524 M 17421 0 4 PRAMEF2 dgv134n54 1 12838434 12975508 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545527,nsv545528 M 17421 2 0 PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 esv3326797 1 12856552 12857850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691776 M 185 1 0 "" NA12878 dgv135n54 1 12861980 12934044 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545530,nsv545531,nsv545529,nsv545533 M 17421 0 5 PRAMEF10,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 esv3435358 1 12866452 12868050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691777 M 185 1 0 PRAMEF4 NA12878 nsv545532 1 12874361 12907825 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710207 M 17421 0 1 PRAMEF10,PRAMEF7,PRAMEF8 nsv945775 1 12883938 12897164 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751576,nssv1751538,nssv1751582,nssv1751554,nssv1751583,nssv1751525,nssv1754281,nssv1751540,nssv1754273,nssv1751530,nssv1751521,nssv1751565,nssv1751528,nssv1751533,nssv1751522,nssv1751549,nssv1751578,nssv1754272,nssv1754284,nssv1751536,nssv1754286,nssv1751545,nssv1751581,nssv1751562,nssv1754277,nssv1751567,nssv1751524,nssv1751569,nssv1754275,nssv1751526,nssv1754278,nssv1751552,nssv1751579,nssv1751559,nssv1751515,nssv1751563,nssv1754282,nssv1751571,nssv1751577,nssv1751568,nssv1751532,nssv1751550,nssv1751574,nssv1751543,nssv1751584,nssv1751534,nssv1751580,nssv1751544,nssv1754280,nssv1751548,nssv1754283,nssv1751537,nssv1754274,nssv1751573,nssv1751517,nssv1751535,nssv1751516,nssv1751523,nssv1751529,nssv1751547,nssv1751519,nssv1751555,nssv1754279,nssv1751557,nssv1754276,nssv1751560,nssv1754285,nssv1751572,nssv1754287,nssv1751541,nssv1751518,nssv1751539,nssv1751558,nssv1751566,nssv1751527,nssv1751546,nssv1751551,nssv1751556,nssv1751561,nssv1751570 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945776 1 12897164 12975663 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752292,nssv1751618,nssv1752294,nssv1752264,nssv1751590,nssv1752283,nssv1752295,nssv1752282,nssv1751587,nssv1751623,nssv1751616,nssv1752261,nssv1751588,nssv1751639,nssv1751595,nssv1751631,nssv1751598,nssv1752277,nssv1751610,nssv1751627,nssv1751606,nssv1751611,nssv1752289,nssv1752278,nssv1751617,nssv1752284,nssv1751600,nssv1752266,nssv1752287,nssv1751615,nssv1751591,nssv1751628,nssv1751620,nssv1752263,nssv1751612,nssv1751629,nssv1751592,nssv1751621,nssv1751607,nssv1751632,nssv1751599,nssv1751637,nssv1751603,nssv1752272,nssv1751589,nssv1751626,nssv1752291,nssv1752267,nssv1752286,nssv1752271,nssv1751609,nssv1752305,nssv1751596,nssv1752298,nssv1752293,nssv1751643,nssv1751601,nssv1752303,nssv1751593,nssv1751633,nssv1752288,nssv1752299,nssv1751594,nssv1752306,nssv1752296,nssv1752302,nssv1751605,nssv1752276,nssv1751604,nssv1751634,nssv1751602,nssv1751642,nssv1752300,nssv1752297,nssv1751640,nssv1751613,nssv1751636,nssv1751624,nssv1752285,nssv1751614,nssv1751585,nssv1752262,nssv1752260,nssv1752281,nssv1752304,nssv1751635,nssv1752273,nssv1752280,nssv1752269,nssv1752265,nssv1752275,nssv1752307,nssv1752274,nssv1751638,nssv1752270,nssv1751625,nssv1751622 M 97 10 0 PRAMEF22,PRAMEF6,PRAMEF7,PRAMEF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545534 1 12903647 12920766 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710210 M 17421 0 1 "" nsv545535 1 12904368 12951424 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710211 M 17421 0 1 PRAMEF6 esv3891636 1 12918097 12951424 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25781834,essv25784392,essv25779830,essv25784075 M 3017 0 4 PRAMEF6 nsv545536 1 12918097 12973925 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710212 M 17421 0 1 PRAMEF22,PRAMEF6 esv3890970 1 12918097 13058015 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25784885,essv25779234,essv25789041,essv25787254,essv25779963 M 3017 1 4 PRAMEF22,PRAMEF23,PRAMEF5,PRAMEF6 nsv508902 1 12920626 13058533 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619771,nssv623773 M 4 2 0 PRAMEF22,PRAMEF23,PRAMEF5,PRAMEF6 NA10860,NA18994 nsv510936 1 12920626 13521717 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621649,nssv624358 M 4 0 0 HNRNPCP5,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA15510,NA18994 nsv1013838 1 12920855 13256958 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477045 M 29084 0 1 HNRNPCP5,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6 esv1004322 1 12920968 12975585 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586195 M 3 1 0 PRAMEF22,PRAMEF6 HuRef nsv945564 1 12925031 12927653 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572330,nssv2572340,nssv2572291,nssv2572338,nssv2572307,nssv2572273,nssv2572326,nssv2572278,nssv2572310,nssv2572279,nssv2572332,nssv2572265,nssv2572303,nssv2572280,nssv2572313,nssv2572344,nssv2572289,nssv2572335,nssv2572296,nssv2572272,nssv2572297,nssv2572283,nssv2572312,nssv2572293,nssv2572290,nssv2572269,nssv2572301,nssv2572267,nssv2572304,nssv2572341,nssv2572317,nssv2572282,nssv2572328,nssv2572295,nssv2572311,nssv2572276,nssv2572333,nssv2572274,nssv2572331,nssv2572266,nssv2572321,nssv2572343,nssv2572264,nssv2572339,nssv2572309,nssv2572268,nssv2572298,nssv2572277,nssv2572322,nssv2572271,nssv2572327,nssv2572342,nssv2572314,nssv2572270,nssv2572318,nssv2572336,nssv2572315,nssv2572284,nssv2572319,nssv2572286,nssv2572287,nssv2572288,nssv2572302,nssv2572275,nssv2572324,nssv2572337,nssv2572320,nssv2572285,nssv2572294,nssv2572281,nssv2572334,nssv2572292,nssv2572300,nssv2572323,nssv2572308,nssv2572325,nssv2572316,nssv2572299,nssv2572305,nssv2572306 M 97 10 0 PRAMEF6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv433183 1 12937471 13110000 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463064 M 9 0 1 HNRNPCP5,PRAMEF22,PRAMEF23,PRAMEF5 NA19129 nsv545537 1 12948150 12975508 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710213 M 17421 1 0 PRAMEF22 nsv821036 1 12969919 12975525 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1419992 M 1 1 0 "" NA10851 esv1010773 1 13025586 13047004 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586120 M 3 1 0 PRAMEF23,PRAMEF5 HuRef nsv820886 1 13025610 13071008 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420103 M 1 0 1 PRAMEF23,PRAMEF5 NA10851 esv27872 1 13025610 13142282 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19875,esv10209,esv10927,esv13674,esv19236,esv20553,esv19008,esv13717,esv20862,esv12755 M 40 14 6 HNRNPCP5,PRAMEF23,PRAMEF5 NA11894,NA12004,NA12044,NA12239,NA12287,NA12414,NA12489,NA12878,NA18517,NA18523,NA18858,NA18861,NA19099,NA19108,NA19129,NA19190,NA19225 nsv945777 1 13025663 13142142 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752393,nssv1752382,nssv1752398,nssv1752351,nssv1752327,nssv1752386,nssv1752401,nssv1752353,nssv1752310,nssv1752370,nssv1752330,nssv1752355,nssv1752402,nssv1752375,nssv1752324,nssv1752388,nssv1752395,nssv1752360,nssv1752325,nssv1752381,nssv1752309,nssv1752352,nssv1752342,nssv1752409,nssv1752332,nssv1752392,nssv1752315,nssv1752414,nssv1752311,nssv1752338,nssv1752331,nssv1752337,nssv1752322,nssv1752350,nssv1752314,nssv1752390,nssv1752399,nssv1752383,nssv1752313,nssv1752343,nssv1752397,nssv1752371,nssv1752319,nssv1752333,nssv1752335,nssv1752369,nssv1752396,nssv1752373,nssv1752339,nssv1752344,nssv1752326,nssv1752359,nssv1752394,nssv1752410,nssv1752320,nssv1752387,nssv1752316,nssv1752384,nssv1752317,nssv1752405,nssv1752318,nssv1752385,nssv1752403,nssv1752361,nssv1752321,nssv1752362,nssv1752328,nssv1752346,nssv1752329,nssv1752363,nssv1752340,nssv1752376,nssv1752374,nssv1752364,nssv1752365,nssv1752354,nssv1752368,nssv1752412,nssv1752308,nssv1752379,nssv1752349,nssv1752358,nssv1752413,nssv1752408,nssv1752406,nssv1752357,nssv1752377,nssv1752380,nssv1752366,nssv1752391,nssv1752336,nssv1752348,nssv1752404,nssv1752407,nssv1752347,nssv1752372,nssv1752341 M 97 10 0 HNRNPCP5,PRAMEF23,PRAMEF5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545538 1 13026162 13099050 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710214,nssv710215 M 17421 0 2 PRAMEF23,PRAMEF5 dgv136n54 1 13034919 13040068 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545540,nsv545539 M 17421 0 2 PRAMEF23,PRAMEF5 nsv945565 1 13035198 13037000 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572362,nssv2572368,nssv2572724,nssv2572712,nssv2572374,nssv2572707,nssv2572361,nssv2572704,nssv2572729,nssv2572696,nssv2572348,nssv2572717,nssv2572360,nssv2572713,nssv2572350,nssv2572708,nssv2572346,nssv2572715,nssv2572363,nssv2572379,nssv2572727,nssv2572720,nssv2572347,nssv2572719,nssv2572373,nssv2572387,nssv2572728,nssv2572385,nssv2572351,nssv2572382,nssv2572354,nssv2572384,nssv2572355,nssv2572381,nssv2572731,nssv2572706,nssv2572359,nssv2572702,nssv2572357,nssv2572372,nssv2572730,nssv2572716,nssv2572376,nssv2572383,nssv2572364,nssv2572722,nssv2572353,nssv2572371,nssv2572726,nssv2572714,nssv2572356,nssv2572711,nssv2572352,nssv2572378,nssv2572367,nssv2572699,nssv2572365,nssv2572375,nssv2572723,nssv2572703,nssv2572358,nssv2572710,nssv2572349,nssv2572377,nssv2572366,nssv2572705,nssv2572732,nssv2572701,nssv2572725,nssv2572718,nssv2572369,nssv2572721,nssv2572700,nssv2572697,nssv2572345,nssv2572386,nssv2572370,nssv2572380,nssv2572698,nssv2572709 M 97 10 0 PRAMEF23,PRAMEF5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3891081 1 13036311 13058015 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25784921,essv25783365 M 3017 0 2 PRAMEF5 nsv545541 1 13060165 13141533 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710218 M 17421 0 1 HNRNPCP5 dgv17n67 1 13065132 13110757 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829470,nsv829492,nsv829481 M 31 6 0 HNRNPCP5 AK4,AK8,NA18564,NA18566,NA18592,NA18947 nsv545542 1 13065307 13097539 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710219 M 17421 0 1 "" nsv112 1 13082358 13084889 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv112 M 1 1 0 "" NA15510 nsv821333 1 13084311 13142282 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420214 M 1 1 0 HNRNPCP5 NA10851 nsv545543 1 13096696 13101084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710220 M 17421 0 1 "" nsv1005416 1 13100960 13317257 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473590 M 29084 0 1 HNRNPCP5,PRAMEF15,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 dgv137n54 1 13101084 13141958 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545545,nsv545544 M 17421 0 2 HNRNPCP5 esv8453 1 13101308 13110503 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30894 M 1 0 0 HNRNPCP5 esv3416903 1 13104952 13105350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691778 M 185 1 0 "" NA12878 nsv1004373 1 13108313 13344520 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3698784 M 29084 1 0 PRAMEF15,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 esv3430112 1 13108952 13110650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691779 M 185 1 0 "" NA12878 esv987716 1 13134493 13142499 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586238 M 3 1 0 "" HuRef esv3397866 1 13138652 13142350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691780 M 185 1 0 "" NA12878 esv1000242 1 13192500 13241441 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586500 M 3 1 0 PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6 HuRef nsv545546 1 13192573 13195951 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710223 M 17421 0 1 "" dgv138n54 1 13192573 13197404 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545557,nsv545548,nsv545555,nsv545549,nsv545547,nsv545553 M 17421 0 11 "" dgv139n54 1 13192573 13198651 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545558,nsv545550 M 17421 3 0 "" dgv140n54 1 13192573 13198988 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545551,nsv545554,nsv545556 M 17421 0 3 "" esv25471 1 13192634 13372033 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12571,esv18416,esv18444,esv10590,esv16485,esv12877,esv12763,esv17976,esv15096,esv17726,esv17055,esv20457 M 40 34 11 PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18502,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv545552 1 13192946 13196684 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710234,nssv710237,nssv710236,nssv710235 M 17421 1 3 "" nsv945778 1 13199918 13262461 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752501,nssv1752493,nssv1752425,nssv1752519,nssv1752427,nssv1752467,nssv1752417,nssv1752450,nssv1752431,nssv1752448,nssv1752505,nssv1752479,nssv1752423,nssv1752489,nssv1752507,nssv1752513,nssv1752429,nssv1752440,nssv1752430,nssv1752473,nssv1752447,nssv1752454,nssv1752449,nssv1752472,nssv1752416,nssv1752515,nssv1752437,nssv1752442,nssv1752436,nssv1752459,nssv1752503,nssv1752514,nssv1752438,nssv1752458,nssv1752418,nssv1752471,nssv1752502,nssv1752487,nssv1752441,nssv1752511,nssv1752439,nssv1752457,nssv1752421,nssv1752445,nssv1752500,nssv1752482,nssv1752426,nssv1752462,nssv1752504,nssv1752483,nssv1752420,nssv1752453,nssv1752508,nssv1752460,nssv1752506,nssv1752495,nssv1752432,nssv1752520,nssv1752419,nssv1752498,nssv1752428,nssv1752478,nssv1752424,nssv1752516,nssv1752435,nssv1752480,nssv1752509,nssv1752474,nssv1752446,nssv1752443,nssv1752434,nssv1752451,nssv1752463,nssv1752465,nssv1752491,nssv1752476,nssv1752490,nssv1752492,nssv1752496,nssv1752494,nssv1752469,nssv1752456,nssv1752485,nssv1752464,nssv1752481,nssv1752461,nssv1752512,nssv1752517,nssv1752497,nssv1752475,nssv1752470,nssv1752518,nssv1752452,nssv1752415,nssv1752486,nssv1752468,nssv1752484 M 97 10 0 PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832981 1 13202753 13389999 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442807 M 95 0 1 PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 nsv511155 1 13212653 13218406 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626055 M 1 0 1 "" 1 nsv545559 1 13214498 13218152 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710245 M 17421 0 1 "" nsv472969 1 13215422 13215422 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012443 M 9 1 0 "" NA19129 nsv821207 1 13219599 13301979 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420225 M 1 0 1 PRAMEF15,PRAMEF23,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA10851 nsv1008245 1 13247920 13344520 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464507,nssv3477492,nssv3698785,nssv3470021,nssv3467514,nssv3470297 M 29084 1 5 PRAMEF15,PRAMEF7,PRAMEF8,PRAMEF9 nsv998907 1 13247920 13677162 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479561 M 29084 1 0 LRRC38,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 esv2762131 1 13247932 13249634 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005005 M 1109 0 1 "" RW_0543 nsv945779 1 13262461 13262961 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752523,nssv1752564,nssv1752533,nssv1753508,nssv1752529,nssv1753502,nssv1752553,nssv1752559,nssv1753530,nssv1752562,nssv1752534,nssv1753496,nssv1752542,nssv1753499,nssv1752544,nssv1753495,nssv1753524,nssv1753514,nssv1753523,nssv1752555,nssv1752537,nssv1753512,nssv1752556,nssv1753520,nssv1753529,nssv1752547,nssv1753532,nssv1752522,nssv1753526,nssv1752561,nssv1753531,nssv1753515,nssv1753528,nssv1753521,nssv1752535,nssv1753505,nssv1752552,nssv1753516,nssv1752524,nssv1753509,nssv1752546,nssv1753519,nssv1752538,nssv1753498,nssv1752548,nssv1753492,nssv1752539,nssv1753497,nssv1752527,nssv1752566,nssv1753525,nssv1752549,nssv1752526,nssv1752567,nssv1752536,nssv1753504,nssv1752528,nssv1753501,nssv1753527,nssv1753494,nssv1752530,nssv1752560,nssv1752525,nssv1753507,nssv1752531,nssv1752563,nssv1752545,nssv1753513,nssv1752541,nssv1752557,nssv1752540,nssv1753518,nssv1753510,nssv1753493,nssv1753503,nssv1752551,nssv1753517,nssv1753506,nssv1752550,nssv1752558 M 97 10 0 PRAMEF7,PRAMEF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945780 1 13262961 13400876 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753548,nssv1753601,nssv1753535,nssv1753586,nssv1753619,nssv1753585,nssv1753545,nssv1752852,nssv1753557,nssv1753590,nssv1753549,nssv1753576,nssv1752845,nssv1753611,nssv1753552,nssv1753615,nssv1753618,nssv1752848,nssv1753620,nssv1753594,nssv1753556,nssv1752856,nssv1753553,nssv1753596,nssv1753550,nssv1752850,nssv1752843,nssv1753616,nssv1753565,nssv1753571,nssv1753537,nssv1753614,nssv1753568,nssv1753559,nssv1753536,nssv1753581,nssv1753546,nssv1753574,nssv1753538,nssv1753587,nssv1753541,nssv1753613,nssv1753554,nssv1753561,nssv1753622,nssv1752854,nssv1753543,nssv1753583,nssv1753540,nssv1753597,nssv1753564,nssv1753607,nssv1752842,nssv1752857,nssv1753547,nssv1753567,nssv1753551,nssv1753584,nssv1753539,nssv1753563,nssv1752844,nssv1753575,nssv1753560,nssv1752853,nssv1753542,nssv1753569,nssv1752846,nssv1753609,nssv1753558,nssv1753608,nssv1752847,nssv1753578,nssv1753570,nssv1753603,nssv1753579,nssv1753605,nssv1753612,nssv1753593,nssv1753534,nssv1753572,nssv1753604,nssv1752849,nssv1753592,nssv1752851,nssv1753591,nssv1753600,nssv1753602,nssv1753589,nssv1753595,nssv1753573,nssv1752855,nssv1753562,nssv1753580,nssv1753617,nssv1753606,nssv1753598,nssv1753582 M 97 10 0 PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1001235 1 13289638 13347927 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586342 M 3 1 0 PRAMEF15,PRAMEF18,PRAMEF19,PRAMEF9 HuRef nsv945566 1 13289766 13293035 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572736,nssv2572787,nssv2572749,nssv2572766,nssv2572751,nssv2572779,nssv2572755,nssv2572772,nssv2572807,nssv2572801,nssv2572745,nssv2572775,nssv2572763,nssv2572795,nssv2572762,nssv2572802,nssv2572805,nssv2572757,nssv2572752,nssv2572794,nssv2572809,nssv2572768,nssv2572808,nssv2572792,nssv2572758,nssv2572773,nssv2572735,nssv2572781,nssv2572806,nssv2572785,nssv2572743,nssv2572789,nssv2572744,nssv2572777,nssv2572737,nssv2572791,nssv2572810,nssv2572796,nssv2572742,nssv2572797,nssv2572739,nssv2572799,nssv2572756,nssv2572803,nssv2572747,nssv2572788,nssv2572740,nssv2572776,nssv2572741,nssv2572778,nssv2572748,nssv2572769,nssv2572734,nssv2572760,nssv2572812,nssv2572784,nssv2572804,nssv2572786,nssv2572753,nssv2572800,nssv2572811,nssv2572764,nssv2572754,nssv2572780,nssv2572765,nssv2572790,nssv2572813,nssv2572793,nssv2572750,nssv2572733,nssv2572746,nssv2572771,nssv2572759,nssv2572783,nssv2572774,nssv2572767,nssv2572782,nssv2572761,nssv2572770,nssv2572798 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3417900 1 13295952 13297250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691781 M 185 1 0 PRAMEF15,PRAMEF9 NA12878 nsv442562 1 13317495 13340609 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617366,nssv1617373,nssv1617364,nssv1617374,nssv1617398,nssv1617365,nssv1617362,nssv1617388,nssv1617381,nssv1617396,nssv1617390,nssv1617393,nssv1617359,nssv1617363,nssv1617367,nssv1617397,nssv1617386,nssv1617356,nssv1617335,nssv1617372,nssv1617377,nssv1617382,nssv1617324,nssv1617394,nssv1617370,nssv1617355,nssv1617395,nssv1617389,nssv1617383,nssv1617385,nssv1617376,nssv1617401,nssv1617387,nssv1617371,nssv1617346,nssv1617361,nssv1617384,nssv1617375,nssv1617379,nssv1617378,nssv1617360,nssv1617368,nssv1617399,nssv1617357,nssv1617400 M 270 4 41 "" NA07019,NA07022,NA07056,NA10847,NA12003,NA12004,NA12239,NA18526,NA18529,NA18540,NA18542,NA18550,NA18555,NA18563,NA18564,NA18566,NA18570,NA18573,NA18577,NA18579,NA18592,NA18603,NA18612,NA18621,NA18622,NA18624,NA18633,NA18635,NA18636,NA18637,NA18940,NA18947,NA18948,NA18952,NA18964,NA18969,NA18971,NA18978,NA18990,NA18992,NA18995,NA18998,NA19005,NA19119,NA19120 esv1751185 1 13341076 13341129 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3633436 M 2 0 1 "" HuRef nsv545560 1 13362398 13362648 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710246 M 17421 0 1 "" nsv8879 1 13392625 13404986 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28030 M 31 1 0 PRAMEF20,PRAMEF21 NA10847 nsv8991 1 13419392 13622373 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv15094,nssv12759,nssv13082,nssv28534,nssv12432,nssv13095,nssv14413,nssv12774,nssv15108,nssv12423,nssv14743,nssv15119,nssv12100,nssv12430,nssv13427,nssv12760,nssv11788,nssv12436,nssv29273,nssv28925,nssv11786,nssv12104,nssv13759,nssv12106,nssv14734,nssv12771,nssv14419,nssv12756,nssv14404,nssv14759,nssv13101,nssv13758,nssv12110,nssv12114,nssv13111,nssv28942,nssv12434,nssv14418,nssv13425,nssv12431,nssv13097,nssv12781,nssv14088,nssv13110,nssv28924,nssv12451,nssv11787,nssv13440,nssv12102,nssv12764,nssv16433,nssv13412,nssv11784,nssv15443,nssv28537,nssv29272,nssv14087,nssv28536,nssv14089,nssv12442,nssv15773,nssv12444,nssv16103,nssv13757,nssv14748,nssv13094,nssv13755 M 31 30 7 PRAMEF13,PRAMEF15,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv508137 1 13423878 13644737 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618967 M 4 0 1 PRAMEF13,PRAMEF15,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 NA10860 esv24967 1 13426574 13429455 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20195,esv13012 M 40 2 0 "" NA12878,NA18907 nsv945782 1 13479686 13486055 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752859,nssv1753830,nssv1753861,nssv1753848,nssv1753804,nssv1753808,nssv1752875,nssv1753857,nssv1753868,nssv1753807,nssv1753803,nssv1753828,nssv1753865,nssv1753809,nssv1752865,nssv1753850,nssv1753866,nssv1753845,nssv1752867,nssv1753858,nssv1752868,nssv1753817,nssv1753811,nssv1753831,nssv1753800,nssv1753814,nssv1753801,nssv1753873,nssv1753860,nssv1753874,nssv1752860,nssv1753821,nssv1753862,nssv1753841,nssv1752873,nssv1753876,nssv1753813,nssv1753838,nssv1753802,nssv1752858,nssv1753864,nssv1753844,nssv1753867,nssv1753818,nssv1752872,nssv1753853,nssv1752861,nssv1753815,nssv1753859,nssv1753834,nssv1752870,nssv1753877,nssv1752863,nssv1753852,nssv1752874,nssv1753827,nssv1752869,nssv1753842,nssv1752864,nssv1753836,nssv1752862,nssv1753846,nssv1753863,nssv1753869,nssv1752866,nssv1753870,nssv1753810,nssv1753820,nssv1752871,nssv1753878,nssv1753806,nssv1753851,nssv1753833,nssv1753822,nssv1753856,nssv1753812,nssv1753854,nssv1753823,nssv1753840,nssv1753819,nssv1753872,nssv1753816,nssv1753826,nssv1753832,nssv1753855,nssv1753843,nssv1753824,nssv1753837,nssv1753835,nssv1753805,nssv1753847,nssv1753871,nssv1753839,nssv1753849,nssv1753829,nssv1753875,nssv1753825 M 97 10 0 PRAMEF7,PRAMEF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv820708 1 13479789 13525723 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420236 M 1 0 1 PRAMEF15,PRAMEF7,PRAMEF8,PRAMEF9 NA10851 esv29915 1 13479789 13595707 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16637,esv15458,esv16388,esv14244,esv11807,esv10843 M 40 34 5 PRAMEF13,PRAMEF15,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF7,PRAMEF8,PRAMEF9 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18502,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 dgv141n54 1 13479839 13547506 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545562,nsv545563,nsv545561 M 17421 0 3 PRAMEF13,PRAMEF15,PRAMEF7,PRAMEF8,PRAMEF9 nsv545564 1 13485321 13579500 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710250 M 17421 0 1 PRAMEF13,PRAMEF15,PRAMEF18,PRAMEF19,PRAMEF9 nsv945784 1 13486055 13489387 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753896,nssv1753948,nssv1753884,nssv1753934,nssv1753951,nssv1753923,nssv1753880,nssv1753902,nssv1753910,nssv1753917,nssv1753893,nssv1753920,nssv1753882,nssv1753922,nssv1753901,nssv1753936,nssv1753900,nssv1753926,nssv1753894,nssv1753942,nssv1753958,nssv1753904,nssv1753950,nssv1753947,nssv1753908,nssv1753911,nssv1753887,nssv1753944,nssv1753885,nssv1753935,nssv1753897,nssv1753924,nssv1753955,nssv1753928,nssv1753954,nssv1753938,nssv1753956,nssv1753945,nssv1753952,nssv1753914,nssv1753898,nssv1753925,nssv1753881,nssv1753930,nssv1753891,nssv1753906,nssv1753892,nssv1753931,nssv1753889,nssv1753943,nssv1753899,nssv1753929,nssv1753949,nssv1753932,nssv1753907,nssv1753905,nssv1753957,nssv1753941,nssv1753890,nssv1753939,nssv1753888,nssv1753918,nssv1753886,nssv1753909,nssv1753953,nssv1753913,nssv1753895,nssv1753879,nssv1753883,nssv1753933,nssv1753903,nssv1753927,nssv1753940,nssv1753912,nssv1753915,nssv1753916,nssv1753919,nssv1753946,nssv1753921,nssv1753937 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545565 1 13489499 13512309 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710251 M 17421 0 1 "" nsv545566 1 13499347 13543636 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710252 M 17421 0 1 PRAMEF13,PRAMEF15,PRAMEF9 nsv945785 1 13499713 13621713 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753977,nssv1754055,nssv1754041,nssv1754017,nssv1754045,nssv1753997,nssv1753961,nssv1753996,nssv1753963,nssv1754032,nssv1753965,nssv1754024,nssv1754038,nssv1753999,nssv1753960,nssv1754026,nssv1753987,nssv1753984,nssv1753962,nssv1754009,nssv1753971,nssv1753998,nssv1753980,nssv1753993,nssv1753973,nssv1754020,nssv1754043,nssv1754048,nssv1754042,nssv1754014,nssv1753976,nssv1753992,nssv1753969,nssv1754029,nssv1753968,nssv1754031,nssv1753981,nssv1754003,nssv1753978,nssv1754050,nssv1753970,nssv1754000,nssv1754037,nssv1753982,nssv1753990,nssv1754012,nssv1753988,nssv1754034,nssv1754044,nssv1754028,nssv1754039,nssv1754006,nssv1753974,nssv1754001,nssv1753972,nssv1754016,nssv1753964,nssv1754025,nssv1753979,nssv1754053,nssv1754036,nssv1754015,nssv1753967,nssv1754027,nssv1753966,nssv1754051,nssv1754040,nssv1754022,nssv1753975,nssv1754018,nssv1753983,nssv1754007,nssv1754010,nssv1754011,nssv1754019,nssv1754008,nssv1754047,nssv1754052,nssv1754005,nssv1753991,nssv1753985,nssv1754002,nssv1753994,nssv1754030,nssv1753989,nssv1754035,nssv1753995,nssv1754054,nssv1754021,nssv1754046,nssv1753986,nssv1754004,nssv1754023,nssv1753959,nssv1754033,nssv1754049,nssv1754013 M 97 10 0 PRAMEF13,PRAMEF15,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv987523 1 13509546 13569151 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586687 M 3 1 0 PRAMEF13,PRAMEF15,PRAMEF18,PRAMEF19,PRAMEF9 HuRef nsv945568 1 13510594 13513863 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2568943,nssv2568938,nssv2572817,nssv2568934,nssv2568881,nssv2568898,nssv2568869,nssv2568915,nssv2568946,nssv2568923,nssv2568882,nssv2568897,nssv2568875,nssv2568937,nssv2568939,nssv2568903,nssv2568894,nssv2568924,nssv2568873,nssv2568914,nssv2572816,nssv2568906,nssv2572815,nssv2568901,nssv2568879,nssv2568930,nssv2568884,nssv2568905,nssv2568877,nssv2568902,nssv2568870,nssv2568917,nssv2568942,nssv2568921,nssv2568880,nssv2568935,nssv2572818,nssv2568927,nssv2568893,nssv2568904,nssv2572819,nssv2568936,nssv2568883,nssv2568912,nssv2568948,nssv2568920,nssv2568945,nssv2568918,nssv2568874,nssv2568895,nssv2568886,nssv2568928,nssv2568885,nssv2568916,nssv2568871,nssv2568891,nssv2568876,nssv2568909,nssv2568941,nssv2568932,nssv2568947,nssv2568931,nssv2568888,nssv2568907,nssv2568896,nssv2568887,nssv2568940,nssv2568925,nssv2568949,nssv2568910,nssv2568872,nssv2568892,nssv2568908,nssv2568890,nssv2568899,nssv2568926,nssv2568913,nssv2572814,nssv2568929,nssv2568919 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3365276 1 13556552 13559450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691782 M 185 1 0 "" NA12878 esv3430097 1 13560152 13562450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691783 M 185 1 0 "" NA12891 nsv9102 1 13635069 13654782 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv12762,nssv13431,nssv13441,nssv13770,nssv15449 M 31 1 4 "" NA18502,NA18860,NA19173,NA19221,NA19240 esv3891970 1 13637410 13703164 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780939 M 3017 0 1 LRRC38 esv27160 1 13646671 13650046 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17463 M 40 0 4 "" NA18523,NA18858,NA19240,NA19257 nsv829503 1 13646704 13647506 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1425488 M 31 1 0 "" AK4 esv2421816 1 13647613 13649415 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5129509,essv5122714,essv5030554,essv5159320,essv5014986,essv5054861,essv5052409,essv5124207,essv5088842,essv5140759,essv5119368,essv5119113,essv5104141,essv5008201,essv5152549,essv5054130,essv5040208,essv5113057,essv5055935,essv5115047,essv5136291,essv5081621,essv5074912,essv5156754,essv5112792,essv5003662,essv5119297,essv5149288,essv5133703,essv5057582,essv5037812,essv5012309,essv5153639,essv5085452,essv5103764,essv5160977,essv5101761,essv5078655,essv5059200,essv5089793,essv5113322,essv5115799,essv5063651,essv5043697,essv5146662,essv5029052,essv5093159,essv5058297,essv5038344,essv5019707,essv5130030,essv5087732,essv5138283,essv5154357,essv5020433,essv5113231,essv5154618,essv5089820,essv5068630,essv5084227,essv5148013,essv5116299,essv5145851,essv5130729,essv5037910,essv5062851,essv5101907,essv5152519,essv5078647,essv5130132,essv5051994,essv5141839,essv5154171,essv5047739,essv5113890,essv5153368,essv5070195,essv5022297,essv5053308 M 1184 0 79 "" NA12340,NA18486,NA18497,NA18498,NA18500,NA18515,NA18516,NA18520,NA18858,NA18860,NA18910,NA19027,NA19028,NA19095,NA19097,NA19107,NA19109,NA19117,NA19137,NA19153,NA19154,NA19172,NA19173,NA19174,NA19197,NA19199,NA19206,NA19209,NA19210,NA19211,NA19239,NA19240,NA19257,NA19258,NA19307,NA19321,NA19381,NA19382,NA19403,NA19429,NA19438,NA19449,NA19451,NA19452,NA19463,NA19466,NA19468,NA19471,NA19474,NA20282,NA20297,NA20301,NA20332,NA20335,NA20348,NA20521,NA20768,NA20796,NA20799,NA20894,NA20906,NA21344,NA21359,NA21366,NA21381,NA21383,NA21399,NA21401,NA21402,NA21404,NA21405,NA21473,NA21520,NA21596,NA21608,NA21614,NA21616,NA21686,NA21740 esv2504117 1 13668926 13669517 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5309749 M 1 1 0 "" NA18507 esv3892081 1 13672044 13820812 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785248 M 3017 0 1 LRRC38,PDPN nsv833092 1 13677506 13836511 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442829,nssv1442818 M 95 0 2 LRRC38,PDPN nsv518971 1 13678626 13688708 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696439 M 2026 0 1 LRRC38 esv2376333 1 13721094 13721453 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4939438 M 1 0 1 "" NA18507 esv1009061 1 13721194 13721194 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570627 M 3 1 0 "" HuRef nsv545567 1 13757866 14225658 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710253 M 17421 1 0 PDPN,PRDM2 esv2417844 1 13766904 13767355 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4564737 M 1 0 1 "" NA18507 nsv460483 1 13776302 13789584 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537046 M 1557 0 1 PDPN 1780854159_A nsv545568 1 13776302 13789584 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173768 M 17421 0 1 PDPN 1780854159_A esv3372731 1 13812605 13812620 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898631,essv8898630,essv8898638,essv8898637,essv8898633,essv8898634,essv8898632,essv8898635 M 185 8 0 PDPN NA18499,NA18501,NA18504,NA18505,NA18523,NA18856,NA19116,NA19257 esv3306243 1 13812606 13812607 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7749286,essv7740627,essv7750527,essv7760129,essv7760282,essv7752856,essv7761514,essv7754869 M 185 8 0 PDPN NA18499,NA18501,NA18504,NA18505,NA18523,NA18856,NA19116,NA19257 nsv3076 1 13826780 13857121 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv474 M 9 1 0 "" NA19240 nsv528139 1 13845837 13861814 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704685 M 2026 0 1 "" esv1349671 1 13857506 13857506 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4353969 M 2 1 0 "" HuRef nsv523568 1 13864656 13877210 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699350 M 2026 0 1 "" nsv3187 1 13864926 13910233 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7852 M 9 0 1 PRDM2 NA12156 nsv474268 1 13949530 13949530 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012404 M 9 1 0 PRDM2 NA18507 nsv473350 1 14006486 14006486 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018587 M 9 1 0 PRDM2 NA19129 esv22539 1 14035627 14039603 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19106,esv16966 M 40 0 10 "" NA18505,NA18511,NA18517,NA18858,NA18907,NA18909,NA19099,NA19147,NA19225,NA19257 nsv508007 1 14057508 14063508 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621465,nssv618491 M 4 0 0 "" CHM,NA15510 nsv516549 1 14081075 14081923 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv669085,nssv690011 M 2026 0 2 "" nsv516435 1 14157047 14159051 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv681150,nssv668340,nssv683301 M 2026 0 3 "" esv35099 1 14167192 14242955 CNV gain Pinto_et_al_2007 17911159 SNP array essv6986978,essv6979949 M 771 2 0 "" NA18863 esv24677 1 14167906 14168414 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16259 M 40 0 1 "" NA19257 esv2758923 1 14177669 14244987 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756836 M 270 2 0 "" NA18861,NA18863 dgv34n100 1 14179094 14243332 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004214,nsv1009457,nsv1000636,nsv1001764,nsv1011918,nsv1006184 M 29084 9 0 "" esv27027 1 14184196 14244173 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13313 M 40 1 0 "" NA18861 esv2764228 1 14185861 14243344 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005006,essv7005007,essv7005008 M 1109 3 0 "" RW_0186,RW_0292,RW_0330 nsv545569 1 14186067 14243724 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710254 M 17421 1 0 "" nsv524444 1 14186067 14243762 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700376 M 2026 1 0 "" nsv517840 1 14204527 14210431 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695245 M 2026 0 1 "" esv1011257 1 14213421 14222133 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563991 M 3 0 1 "" HuRef esv2573663 1 14308679 14311820 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5360365 M 1 0 1 "" NA18507 nsv819952 1 14308680 14311417 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419473 M 2 0 1 "" AK1 nsv829514 1 14308848 14309351 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431794 M 31 0 1 "" AK20 esv3305958 1 14308895 14308896 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7748233,essv7762927,essv7745094,essv7760986,essv7747376,essv7753864,essv7758997,essv7743378,essv7744901,essv7742581,essv7742210,essv7752181,essv7762379,essv7762098,essv7756760,essv7761199,essv7748195,essv7754514,essv7746231,essv7749698,essv7741926,essv7756552,essv7751856,essv7756116,essv7742010,essv7740359,essv7753211,essv7740898,essv7757903,essv7746996,essv7756960,essv7752332,essv7757452,essv7742692,essv7757610,essv7746649,essv7740711,essv7753507,essv7745613,essv7758820,essv7759946,essv7756467,essv7744194,essv7747825,essv7749458,essv7750960,essv7751546,essv7749958,essv7759328,essv7758154 M 185 50 0 "" NA06986,NA07000,NA07051,NA11920,NA11995,NA12043,NA12249,NA12750,NA12776,NA18501,NA18507,NA18508,NA18510,NA18516,NA18519,NA18522,NA18526,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18605,NA18608,NA18638,NA18870,NA18912,NA18940,NA18951,NA18960,NA18964,NA19005,NA19093,NA19099,NA19114,NA19129,NA19137,NA19138,NA19225 esv3338675 1 14308895 14308903 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898664,essv8898693,essv8898691,essv8898662,essv8898667,essv8898688,essv8898663,essv8898668,essv8898659,essv8898694,essv8898674,essv8898644,essv8898648,essv8898673,essv8898652,essv8898651,essv8898661,essv8898666,essv8898676,essv8898675,essv8898654,essv8898690,essv8898679,essv8898684,essv8898660,essv8898645,essv8898689,essv8898686,essv8898678,essv8898657,essv8898643,essv8898672,essv8898680,essv8898640,essv8898682,essv8898671,essv8898656,essv8898653,essv8898685,essv8898646,essv8898683,essv8898677,essv8898650,essv8898642,essv8898687,essv8898655,essv8898649,essv8898639,essv8898665,essv8898641 M 185 50 0 "" NA06986,NA07000,NA07051,NA11920,NA11995,NA12043,NA12249,NA12750,NA12776,NA18501,NA18507,NA18508,NA18510,NA18516,NA18519,NA18522,NA18526,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18605,NA18608,NA18638,NA18870,NA18912,NA18940,NA18951,NA18960,NA18964,NA19005,NA19093,NA19099,NA19114,NA19129,NA19137,NA19138,NA19225 esv22693 1 14308898 14311535 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17238 M 40 0 21 "" NA11931,NA12044,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA15510,NA18505,NA18508,NA18511,NA18523,NA18858,NA18861,NA19099,NA19114,NA19129,NA19147,NA19225,NA19240 dgv142n54 1 14308955 14310800 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545570,nsv545571 M 17421 0 2 "" dgv143n54 1 14308955 14311484 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545572,nsv545575,nsv545573,nsv545574 M 17421 0 14 "" esv6543 1 14309425 14311766 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28984 M 1 0 0 "" dgv144n54 1 14309548 14311484 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545578,nsv545579,nsv545576,nsv545580,nsv545582,nsv545581,nsv545577 M 17421 0 212 "" esv3429 1 14309627 14311615 CNV loss Wang_et_al_2008 18987735 Sequencing essv25870 M 1 0 1 "" YH dgv18n67 1 14309636 14310701 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv829537,nsv829525 M 31 0 2 "" NA18547,NA18949 nsv829548 1 14309636 14311391 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1426373,nssv1434861,nssv1423109,nssv1437928,nssv1436328,nssv1428816,nssv1430332,nssv1421444,nssv1434158,nssv1423978,nssv1432529,nssv1423396,nssv1433411,nssv1440802,nssv1431795,nssv1440119,nssv1422359,nssv1431058,nssv1423945,nssv1432008 M 31 0 20 "" AK12,AK16,AK18,AK20,AK6,NA18526,NA18542,NA18552,NA18564,NA18570,NA18582,NA18592,NA18942,NA18947,NA18951,NA18968,NA18969,NA18972,NA18997,NA18999 dgv145n54 1 14310146 14311629 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545584,nsv545583,nsv545586,nsv545585 M 17421 0 11 "" esv2764190 1 14328335 14337539 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005012,essv7005014,essv7005013,essv7005009,essv7005015,essv7005010 M 1109 0 6 "" RW_0018,RW_0042,RW_0067,RW_0142,RW_0189,RW_0518 esv3367782 1 14369815 14369815 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740936 M 185 1 0 "" NA19240 nsv528033 1 14413899 14418596 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704564 M 2026 0 1 "" nsv460494 1 14549496 14576441 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537055 M 1557 0 1 "" 1780862466_A nsv545587 1 14549496 14576441 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173769 M 17421 0 1 "" 1780862466_A nsv520614 1 14550316 14551313 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697519 M 2026 0 1 "" nsv518697 1 14550316 14561294 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696148 M 2026 0 1 "" nsv833203 1 14551787 14593526 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442896,nssv1442840,nssv1442940,nssv1442907,nssv1442852,nssv1442885,nssv1442863,nssv1442874,nssv1442929,nssv1442918 M 95 5 5 "" esv2617537 1 14611089 14612630 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5289167 M 1 0 1 "" NA18507 esv3360411 1 14691683 14692497 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652043 M 185 1 0 "" NA19240 nsv512719 1 14691762 14691812 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625344 M 1 1 0 "" 1 esv1086173 1 14713592 14713592 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4139423 M 2 1 0 "" HuRef nsv833314 1 14771742 14941463 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442951 M 95 0 1 KAZN nsv460506 1 14779801 14854507 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537067 M 1557 0 1 KAZN HGDP00554 nsv545588 1 14779801 14854507 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173770 M 17421 0 1 KAZN HGDP00554 nsv3298 1 14784894 14812073 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7914 M 9 1 0 KAZN NA12156 nsv473059 1 14819856 14819856 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017325 M 9 1 0 KAZN NA19129 dgv35n100 1 14826875 15097331 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001102,nsv1014029 M 29084 2 0 KAZN nsv470697 1 14832760 14917383 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547709 M 443 1 0 KAZN HGDP00890 esv2637393 1 14851169 14852148 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5269600 M 1 1 0 KAZN NA18507 esv1497348 1 14851595 14851595 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3929982 M 2 1 0 KAZN HuRef nsv476853 1 14899946 14899946 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020114 M 9 1 0 KAZN NA12878 nsv478373 1 14951249 14951249 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018566 M 9 1 0 KAZN NA18507 nsv545589 1 14962354 15034937 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710494 M 17421 0 1 KAZN nsv475615 1 14967854 14967854 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013409 M 9 1 0 KAZN NA12878 nsv1001770 1 14978644 15021758 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481126 M 29084 0 1 KAZN nsv545590 1 14984514 15034937 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710495 M 17421 0 1 KAZN esv8986 1 14986139 14986338 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31427 M 1 0 0 KAZN esv1214811 1 15067050 15067050 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4234331 M 2 1 0 KAZN HuRef esv3348016 1 15067058 15067058 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701356 M 185 1 0 KAZN NA12878 nsv545591 1 15079598 15329506 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710496 M 17421 0 1 KAZN,TMEM51-AS1 nsv1008761 1 15085478 15149113 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482225 M 29084 1 0 KAZN nsv820102 1 15128849 15133915 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419679 M 2 1 0 KAZN AK1 esv23718 1 15147508 15152160 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11412 M 40 0 1 KAZN NA19099 nsv441681 1 15149071 15151883 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656587,nssv1656585,nssv1656586 M 270 0 3 KAZN NA18913,NA18914,NA19099 esv2761573 1 15161797 15189817 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6994411 M 1109 1 0 KAZN SW_0857 esv27978 1 15199262 15199882 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13462 M 40 0 1 KAZN NA19190 nsv520075 1 15213642 15214000 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697211 M 2026 0 1 KAZN nsv527648 1 15213642 15215681 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704119 M 2026 0 1 KAZN nsv517844 1 15213642 15216990 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695248 M 2026 0 1 KAZN nsv521566 1 15215681 15219950 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698183 M 2026 1 0 KAZN nsv545592 1 15217523 15250274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710497 M 17421 0 1 KAZN esv22036 1 15237554 15238209 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11732 M 40 0 1 KAZN NA12776 esv1011013 1 15237876 15237985 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577254 M 3 0 1 KAZN HuRef esv1748933 1 15237878 15237988 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3823225 M 2 0 1 KAZN HuRef esv1186245 1 15238026 15238026 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3944374 M 2 1 0 KAZN HuRef esv2313486 1 15247610 15248022 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4985131 M 1 0 1 KAZN NA18507 nsv833425 1 15282413 15490811 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442963 M 95 1 0 C1orf195,FHAD1,KAZN,TMEM51,TMEM51-AS1 nsv508913 1 15291473 15364544 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619772 M 4 1 0 C1orf195,KAZN,TMEM51,TMEM51-AS1 NA10860 esv2618588 1 15309351 15309417 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5193142 M 1 0 1 KAZN NA18507 esv22618 1 15328730 15333595 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15067 M 40 0 1 TMEM51-AS1 NA18502 nsv437203 1 15360031 15362911 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467084 M 60 0 1 TMEM51 NA19103 esv2764256 1 15361772 15362873 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005018,essv7005019,essv7005020,essv7005017,essv7005016 M 1109 0 5 TMEM51 RW_0012,RW_0222,RW_0231,RW_0281,RW_0601 nsv441682 1 15361772 15362873 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656591,nssv1656589,nssv1656590,nssv1656588 M 270 0 4 TMEM51 NA19102,NA19103,NA19206,NA19208 nsv519926 1 15362404 15362471 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv687857,nssv659518,nssv689561,nssv690383 M 2026 0 4 TMEM51 nsv159446 1 15373466 15383249 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178024 M 24 TMEM51 nsv1005708 1 15388886 15423112 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473940 M 29084 1 0 TMEM51 nsv460550 1 15391379 15423112 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537098 M 1557 1 0 TMEM51 HGDP00863 nsv545593 1 15391379 15423112 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173771 M 17421 1 0 TMEM51 HGDP00863 esv2750811 1 15402847 15423112 CNV gain Pinto_et_al_2007 17911159 SNP array essv6981605,essv6985613,essv6981606 M 771 3 0 TMEM51 BEC_304 nsv1012018 1 15411846 15426351 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472900 M 29084 1 0 TMEM51 esv2621292 1 15423576 15424577 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5251821 M 1 1 0 "" NA18507 esv2423211 1 15429819 15431734 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5345612 M 1 0 1 "" NA18507 esv28285 1 15448819 15450699 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15216 M 40 0 1 FHAD1 NA12749 esv27394 1 15453912 15454965 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14001 M 40 1 0 FHAD1 NA18861 nsv517234 1 15458200 15466253 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv678288,nssv669267,nssv691051,nssv654089 M 2026 4 0 FHAD1 esv2762133 1 15472394 15474623 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005021 M 1109 0 1 FHAD1 RW_0544 nsv472480 1 15475141 15475141 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014170 M 9 1 0 FHAD1 NA18555 esv2508152 1 15513246 15514137 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5282605 M 1 1 0 FHAD1 NA18507 nsv833536 1 15522588 15727912 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442985,nssv1442974 M 95 0 2 CASP9,CELA2A,CELA2B,CTRC,DNAJC16,EFHD2,FHAD1 nsv1007255 1 15529729 15551428 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475158 M 29084 0 1 FHAD1 nsv460561 1 15559646 15622804 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537108 M 1557 0 1 EFHD2,FHAD1 NINDS_60 nsv545594 1 15559646 15622804 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173772 M 17421 0 1 EFHD2,FHAD1 NINDS_60 nsv475629 1 15578383 15578383 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016316 M 9 1 0 FHAD1 NA12878 nsv478487 1 15583885 15583885 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014816 M 9 1 0 FHAD1 NA18507 esv2117572 1 15644908 15645240 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4687770 M 1 0 1 CTRC NA18507 esv2761582 1 15656358 15674082 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994522 M 1109 0 1 CELA2A SW_1130 nsv945786 1 15662519 15665863 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754068,nssv1755503,nssv1754057,nssv1755517,nssv1754061,nssv1755483,nssv1754067,nssv1755516,nssv1754060,nssv1754102,nssv1754077,nssv1754093,nssv1754073,nssv1755484,nssv1754062,nssv1755496,nssv1755511,nssv1754082,nssv1755510,nssv1755485,nssv1754070,nssv1755522,nssv1755513,nssv1755492,nssv1755508,nssv1754092,nssv1754075,nssv1755489,nssv1754065,nssv1754104,nssv1754058,nssv1755486,nssv1754074,nssv1754099,nssv1754087,nssv1755499,nssv1755514,nssv1754101,nssv1755515,nssv1754103,nssv1754066,nssv1754081,nssv1754071,nssv1755505,nssv1754064,nssv1755488,nssv1755509,nssv1755497,nssv1754059,nssv1754095,nssv1755512,nssv1755498,nssv1755507,nssv1754096,nssv1754085,nssv1755524,nssv1754069,nssv1754090,nssv1754078,nssv1755519,nssv1754084,nssv1754100,nssv1755506,nssv1754094,nssv1754076,nssv1755495,nssv1754072,nssv1755504,nssv1754063,nssv1754106,nssv1754080,nssv1755491,nssv1755521,nssv1754086,nssv1754097,nssv1754083,nssv1755493,nssv1755523,nssv1755494,nssv1754089,nssv1755520,nssv1755490,nssv1755518,nssv1755501,nssv1754098,nssv1754079,nssv1754088,nssv1754105,nssv1755525,nssv1755487,nssv1755482,nssv1754107,nssv1754056,nssv1755502,nssv1755500,nssv1754091,nssv1755481 M 97 10 0 CELA2A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv441683 1 15665011 15683808 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656595,nssv1656593,nssv1656594,nssv1656592 M 270 0 4 CELA2A,CELA2B NA12865,NA12875,NA18959,NA18981 nsv818056 1 15669395 15681459 CNV loss Wang_et_al_2007 17921354 SNP array nssv1415731,nssv1415732 M 112 0 2 CELA2A,CELA2B NA12865,NA12875 esv29612 1 15785729 15786199 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18278 M 40 1 0 "" NA19240 nsv945787 1 15803039 15804349 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755541,nssv1755578,nssv1755554,nssv1755619,nssv1755539,nssv1755599,nssv1755548,nssv1755596,nssv1755550,nssv1755571,nssv1755542,nssv1755552,nssv1755532,nssv1755553,nssv1755557,nssv1755568,nssv1755527,nssv1755576,nssv1755538,nssv1755574,nssv1755608,nssv1755582,nssv1755610,nssv1755579,nssv1755529,nssv1755598,nssv1755530,nssv1755581,nssv1755607,nssv1755597,nssv1755547,nssv1755586,nssv1755611,nssv1755565,nssv1755605,nssv1755614,nssv1755543,nssv1755577,nssv1755536,nssv1755572,nssv1755546,nssv1755563,nssv1755533,nssv1755561,nssv1755604,nssv1755593,nssv1755535,nssv1755567,nssv1755555,nssv1755562,nssv1755612,nssv1755556,nssv1755545,nssv1755526,nssv1755537,nssv1755600,nssv1755606,nssv1755587,nssv1755531,nssv1755583,nssv1755534,nssv1755589,nssv1755603,nssv1755594,nssv1755609,nssv1755549,nssv1755528,nssv1755569,nssv1755544,nssv1755570,nssv1755540,nssv1755592,nssv1755602,nssv1755585,nssv1755616,nssv1755558,nssv1755595,nssv1755613,nssv1755621,nssv1755573,nssv1755618,nssv1755566,nssv1755588,nssv1755601,nssv1755617,nssv1755591,nssv1755560,nssv1755575,nssv1755580,nssv1755551,nssv1755620,nssv1755564,nssv1755622,nssv1755615,nssv1755559,nssv1755590,nssv1755584 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv471769 1 15805560 15811009 CNV loss Hinds_et_al_2006 16327809 Oligo aCGH,PCR nssv646050 M 95 "" esv3302757 1 15817244 15819632 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7733047 M 185 1 0 DDI2 NA18501 nsv1006877 1 15841197 15906788 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3698786 M 29084 1 0 DDI2,PLEKHM2,RSC1A1 nsv524044 1 15874175 16034423 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699908 M 2026 0 1 FBLIM1,FLJ37453,PLEKHM2,SLC25A34,TMEM82,UQCRHL esv28978 1 15882131 15883977 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv21090 M 40 1 0 PLEKHM2 NA06985 nsv545595 1 15882443 15883081 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710499,nssv710498 M 17421 1 1 "" dgv146n54 1 15882443 15883346 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545596,nsv545603,nsv545597 M 17421 0 3 "" dgv147n54 1 15882443 15883663 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545598,nsv545599 M 17421 11 2 PLEKHM2 dgv148n54 1 15882443 15883925 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545601,nsv545600 M 17421 6 0 PLEKHM2 nsv545602 1 15882545 15883169 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710521 M 17421 0 1 "" dgv149n54 1 15882649 15883866 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545609,nsv545604,nsv545610,nsv545611 M 17421 0 5 PLEKHM2 nsv545605 1 15882702 15883412 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710524 M 17421 0 1 "" dgv150n54 1 15882702 15883925 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545608,nsv545607,nsv545606 M 17421 7 0 PLEKHM2 nsv545612 1 15883081 15883925 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710536 M 17421 1 0 PLEKHM2 nsv545613 1 15883081 15888371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710537 M 17421 0 1 PLEKHM2 dgv151n54 1 15885244 15967903 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545616,nsv545615,nsv545614 M 17421 3 0 FBLIM1,PLEKHM2,SLC25A34,TMEM82 HGDP00130,HGDP00160,HGDP00163 dgv11n27 1 15888573 15967903 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460572,nsv460583 M 1557 2 0 FBLIM1,PLEKHM2,SLC25A34,TMEM82 HGDP00130,HGDP00160 nsv508925 1 15916178 16002655 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619773 M 4 1 0 FBLIM1,PLEKHM2,SLC25A34,TMEM82 NA10860 nsv545617 1 15920592 15969824 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173776 M 17421 0 1 FBLIM1,PLEKHM2,SLC25A34,TMEM82 1780862275_A nsv460594 1 15948493 15998794 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537135 M 1557 0 1 FBLIM1 NINDS_70 nsv545618 1 15948493 15998794 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173777 M 17421 0 1 FBLIM1 NINDS_70 nsv527046 1 15959847 15983402 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703422 M 2026 0 1 FBLIM1 nsv945788 1 15991944 15995104 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755635,nssv1754992,nssv1755028,nssv1754984,nssv1755645,nssv1755019,nssv1755647,nssv1754997,nssv1756093,nssv1754985,nssv1755651,nssv2568950,nssv1756097,nssv1756105,nssv1755652,nssv1754998,nssv1755029,nssv1755623,nssv1755030,nssv2568958,nssv1755638,nssv1755014,nssv1755624,nssv1755648,nssv1755639,nssv2568961,nssv1755632,nssv1755002,nssv1756094,nssv1754993,nssv1756096,nssv2568967,nssv1755644,nssv2568962,nssv1755627,nssv1754986,nssv1755643,nssv2568954,nssv1755636,nssv2568951,nssv1755640,nssv1755023,nssv1755633,nssv1754991,nssv1755637,nssv1754994,nssv1756095,nssv1756099,nssv1755630,nssv1755016,nssv1755654,nssv1755013,nssv1755642,nssv2568964,nssv1755031,nssv1755007,nssv1755625,nssv1755024,nssv1755634,nssv1755000,nssv1755629,nssv1754996,nssv1755628,nssv1755009,nssv1755626,nssv1755018,nssv1756098,nssv2568956,nssv1755631,nssv1754990,nssv1755641,nssv1754989,nssv1756107,nssv1755015,nssv1756104,nssv2568963,nssv1755650,nssv1755027,nssv2568959,nssv1755649,nssv1756100,nssv1755655,nssv2568953,nssv1756102,nssv2568952,nssv1755006,nssv1755012,nssv1755653,nssv2568960,nssv1756108,nssv1755005,nssv1755026,nssv2568968,nssv1754988,nssv1755017,nssv1755021,nssv1755004,nssv1755011,nssv1755001,nssv1756106,nssv1755010,nssv2568957,nssv1754995,nssv1754999,nssv1755003,nssv1756103,nssv1755022,nssv1755646,nssv1755025,nssv1754987,nssv1755008,nssv1755020,nssv2568965,nssv1756101 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv833647 1 15993124 16151416 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442996 M 95 0 1 FLJ37453,SPEN,UQCRHL,ZBTB17 nsv1002667 1 15997156 16008361 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465075 M 29084 1 0 UQCRHL esv2758924 1 16000067 16027694 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756837 M 270 0 2 UQCRHL NA07019,NA12815 nsv545619 1 16002028 16033976 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710538 M 17421 0 1 FLJ37453,UQCRHL dgv36n100 1 16004406 16027585 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999232,nsv1011909,nsv1010221,nsv1005130,nsv1006630 M 29084 7 0 UQCRHL nsv3409 1 16009070 16051776 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8042 M 9 0 1 FLJ37453,SPEN NA12156 nsv511126 1 16021888 16034423 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626032 M 1 0 1 FLJ37453 1 dgv37n100 1 16022490 16123120 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005932,nsv1000044,nsv1005322,nsv1011973,nsv1001014,nsv1002341,nsv1008828,nsv1011856,nsv1006258 M 29084 14 0 FLJ37453,SPEN esv3584590 1 16022502 16027597 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838024,essv9838026,essv9838025 M 34 0 3 "" OA053,OA054,OA062 esv2763791 1 16024214 16027597 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6996077,essv6995077,essv6995633,essv6995411,essv6994633,essv6995966,essv6995300,essv6994966,essv6994855,essv6995744,essv6995522,essv6995855,essv6995189,essv6996188,essv6994744 M 1109 0 15 "" SW_0008,SW_0009,SW_0158,SW_0173,SW_0215,SW_0255,SW_0634,SW_0691,SW_0847,SW_0888,SW_1038,SW_1126,SW_1148,SW_1171,SW_1355 nsv511677 1 16024357 16028385 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626315 M 1 0 1 "" 1 esv1010744 1 16024518 16030696 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564107 M 3 0 1 "" HuRef nsv498663 1 16024530 16028020 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585393 M 9 0 1 "" esv29597 1 16024861 16028089 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17422 M 40 0 12 "" NA06985,NA11894,NA11931,NA11993,NA12004,NA12156,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510 nsv513982 1 16024864 16026544 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2853954,nssv2853942,nssv2853918,nssv2853869,nssv2853901,nssv2853919,nssv2853889,nssv2853890,nssv2850678,nssv2850676,nssv2853873,nssv2853923,nssv2853961,nssv2850680,nssv2853842,nssv2853893,nssv2853851,nssv2853921,nssv2853883,nssv2853904,nssv2853931,nssv2853862,nssv2853831,nssv2853832,nssv2853915,nssv2853956,nssv2853834,nssv2853945,nssv2853914,nssv2853902,nssv2853928,nssv2853861,nssv2853898,nssv2853930,nssv2853860,nssv2853876,nssv2853951,nssv2853924,nssv2853933,nssv2853888,nssv2853938,nssv2850682,nssv2853909,nssv2853863,nssv2853857,nssv2853905,nssv2853939,nssv2853906,nssv2853897,nssv2853946,nssv2853849,nssv2853838,nssv2853910,nssv2853884,nssv2853887,nssv2853916,nssv2853856,nssv2850677,nssv2853947,nssv2853847,nssv2853944,nssv2853895,nssv2853953,nssv2853835,nssv2853896,nssv2853882,nssv2853952,nssv2853907,nssv2853929,nssv2853949,nssv2853908,nssv2853866,nssv2853872,nssv2853881,nssv2853837,nssv2853858,nssv2853886,nssv2853950,nssv2853917,nssv2853957,nssv2853843,nssv2853927,nssv2853844,nssv2853937,nssv2853850,nssv2853899,nssv2853833,nssv2853912,nssv2853839,nssv2853955,nssv2853878,nssv2850675,nssv2853900,nssv2853874,nssv2853958,nssv2853870,nssv2853925,nssv2853926,nssv2853830,nssv2853829,nssv2853892,nssv2853943,nssv2850679,nssv2853853,nssv2853845,nssv2853959,nssv2853852,nssv2853885,nssv2853903,nssv2853940,nssv2853932,nssv2853836,nssv2853867,nssv2853868,nssv2853848,nssv2853934,nssv2853875,nssv2853855,nssv2853960,nssv2853891,nssv2853935,nssv2853920,nssv2853936,nssv2853879,nssv2853894,nssv2853865,nssv2853880,nssv2853948,nssv2853941,nssv2853877,nssv2853922,nssv2853911,nssv2853864,nssv2853854,nssv2850681,nssv2853846,nssv2853913,nssv2853841,nssv2853859,nssv2853840,nssv2853871 M 2366 0 141 "" NA06985,NA06986,NA06989,NA06991,NA07014,NA07019,NA07031,NA07034,NA07048,NA07056,NA07346,NA07348,NA07349,NA07357,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10850,NA10856,NA10857,NA10863,NA11829,NA11830,NA11832,NA11839,NA11840,NA11881,NA11882,NA11894,NA11918,NA11920,NA11930,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12058,NA12144,NA12156,NA12234,NA12249,NA12272,NA12273,NA12274,NA12275,NA12286,NA12336,NA12343,NA12347,NA12400,NA12414,NA12485,NA12489,NA12708,NA12716,NA12717,NA12740,NA12749,NA12750,NA12751,NA12753,NA12760,NA12761,NA12763,NA12766,NA12775,NA12776,NA12778,NA12802,NA12813,NA12814,NA12815,NA12817,NA12828,NA12830,NA12832,NA12842,NA12843,NA12872,NA12877,NA12878,NA12889,NA12890,NA12891,NA18498,NA18509,NA18542,NA18564,NA18609,NA18853,NA18854,NA18868,NA18869,NA18873,NA18874,NA18875,NA18924,NA18925,NA19098,NA19123,NA19150,NA19151,NA19171,NA19175,NA19177,NA19181,NA19183,NA21301,NA21302,NA21303,NA21344,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21400,NA21401,NA21454,NA21475,NA21477,NA21478,NA21479,NA21480,NA21489,NA21522,NA21583,NA21717,NA21718 nsv545620 1 16024884 16027531 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710622,nssv710768,nssv710772,nssv710682,nssv710644,nssv710664,nssv710675,nssv710784,nssv710755,nssv710785,nssv710629,nssv710630,nssv710626,nssv710672,nssv710756,nssv710779,nssv710635,nssv710794,nssv710791,nssv710778,nssv710777,nssv710786,nssv710795,nssv710634,nssv710787,nssv710677,nssv710790,nssv710681,nssv710678,nssv710789,nssv710676,nssv710788,nssv710663,nssv710706,nssv710793,nssv710632,nssv710680,nssv710633,nssv710679,nssv710662,nssv710631,nssv710792,nssv710625,nssv710686,nssv710671,nssv710667,nssv710776,nssv710638,nssv710705,nssv710685,nssv710683,nssv710636,nssv710684,nssv710761,nssv710774,nssv710690,nssv710666,nssv710783,nssv710687,nssv710688,nssv710689,nssv710796,nssv710637,nssv710665,nssv710773,nssv710643,nssv710765,nssv710670,nssv710641,nssv710775,nssv710639,nssv710767,nssv710692,nssv710697,nssv710691,nssv710696,nssv710640,nssv710762,nssv710766,nssv710693,nssv710760,nssv710694,nssv710695,nssv710669,nssv710668,nssv710798,nssv710642,nssv710771,nssv710698,nssv710704,nssv710702,nssv710797,nssv710703,nssv710701,nssv710700,nssv710699,nssv710673,nssv710782,nssv710780,nssv710628,nssv710708,nssv710726,nssv710549,nssv710707,nssv710674,nssv710710,nssv710711,nssv710539,nssv710548,nssv710540,nssv710547,nssv710542,nssv710541,nssv710543,nssv710546,nssv710709,nssv710545,nssv710576,nssv710544,nssv710552,nssv710575,nssv710645,nssv710652,nssv710713,nssv710551,nssv710712,nssv710770,nssv710754,nssv710560,nssv710550,nssv710661,nssv710556,nssv710555,nssv710559,nssv710553,nssv710554,nssv710558,nssv710715,nssv710717,nssv710714,nssv710651,nssv710557,nssv710716,nssv710561,nssv710718,nssv710574,nssv710656,nssv710764,nssv710724,nssv710721,nssv710658,nssv710650,nssv710562,nssv710757,nssv710565,nssv710564,nssv710719,nssv710720,nssv710563,nssv710725,nssv710647,nssv710566,nssv710722,nssv710723,nssv710752,nssv710573,nssv710646,nssv710649,nssv710657,nssv710572,nssv710567,nssv710569,nssv710568,nssv710648,nssv710570,nssv710571,nssv710578,nssv710758,nssv710654,nssv710623,nssv710751,nssv710577,nssv710581,nssv710734,nssv710580,nssv710655,nssv710627,nssv710579,nssv710781,nssv710763,nssv710660,nssv710728,nssv710727,nssv710729,nssv710620,nssv710584,nssv710583,nssv710582,nssv710732,nssv710589,nssv710587,nssv710733,nssv710585,nssv710586,nssv710730,nssv710588,nssv710731,nssv710653,nssv710769,nssv710605,nssv710593,nssv710619,nssv710659,nssv710590,nssv710753,nssv710592,nssv710735,nssv710591,nssv710736,nssv710604,nssv710743,nssv710597,nssv710759,nssv710594,nssv710596,nssv710595,nssv710738,nssv710737,nssv710739,nssv710742,nssv710603,nssv710741,nssv710599,nssv710598,nssv710600,nssv710602,nssv710740,nssv710601,nssv710744,nssv710621,nssv710606,nssv710608,nssv710612,nssv710607,nssv710609,nssv710618,nssv710624,nssv710610,nssv710750,nssv710611,nssv710748,nssv710746,nssv710613,nssv710745,nssv710617,nssv710749,nssv710616,nssv710747,nssv710614,nssv710615 M 17421 0 260 "" nsv945789 1 16024977 16027778 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756121,nssv1756200,nssv1756117,nssv1756152,nssv1756140,nssv1756202,nssv1756127,nssv1756182,nssv1756186,nssv1756141,nssv1756138,nssv1756156,nssv1756131,nssv1756203,nssv1756113,nssv1756173,nssv1756190,nssv1756198,nssv1756122,nssv1756148,nssv1756137,nssv1756132,nssv1756110,nssv1756145,nssv1756123,nssv1756160,nssv1756119,nssv1756175,nssv1756120,nssv1756205,nssv1756192,nssv1756180,nssv1756193,nssv1756135,nssv1756191,nssv1756163,nssv1756133,nssv1756147,nssv1756128,nssv1756109,nssv1756130,nssv1756168,nssv1756126,nssv1756171,nssv1756125,nssv1756143,nssv1756118,nssv1756157,nssv1756188,nssv1756166,nssv1756194,nssv1756169,nssv1756124,nssv1756204,nssv1756116,nssv1756177,nssv1756187,nssv1756162,nssv1756129,nssv1756161,nssv1756114,nssv1756178,nssv1756189,nssv1756150,nssv1756115,nssv1756151,nssv1756111,nssv1756185,nssv1756112,nssv1756170,nssv1756195,nssv1756201,nssv1756159,nssv1756134,nssv1756172,nssv1756164,nssv1756183,nssv1756155,nssv1756196,nssv1756153,nssv1756136,nssv1756199,nssv1756181,nssv1756174,nssv1756158,nssv1756144,nssv1756176,nssv1756139,nssv1756154,nssv1756142,nssv1756167,nssv1756149,nssv1756184,nssv1756179,nssv1756146,nssv1756197,nssv1756165 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv152n54 1 16024987 16026472 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545621,nsv545622 M 17421 0 2 "" nsv1011969 1 16026072 16074127 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465593,nssv3467774 M 29084 1 1 FLJ37453,SPEN nsv1012917 1 16026072 16074609 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475320 M 29084 0 1 FLJ37453,SPEN esv2764241 1 16026084 16054232 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005028,essv7005025,essv7005030,essv7005023,essv7005027,essv7005024,essv7005029,essv7005026 M 1109 0 8 FLJ37453,SPEN RW_0028,RW_0058,RW_0098,RW_0131,RW_0136,RW_0273,RW_0325,RW_0570 dgv153n54 1 16026085 16027531 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545625,nsv545623 M 17421 0 3 "" dgv154n54 1 16026085 16033976 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545624,nsv545626 M 17421 0 2 FLJ37453 dgv38n100 1 16038248 16123120 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004140,nsv1011695 M 29084 2 0 FLJ37453,SPEN nsv829559 1 16058573 16065542 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422361,nssv1428817,nssv1439448 M 31 0 3 SPEN AK12,NA18537,NA18552 esv22591 1 16082863 16086049 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17906 M 40 1 0 SPEN NA12287 nsv508936 1 16114934 16380107 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619775,nssv619774 M 4 1 0 C1orf64,CLCNKA,CLCNKB,EPHA2,FAM131C,HSPB7,SPEN,ZBTB17 NA10860 nsv478397 1 16127509 16127509 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012377 M 9 1 0 SPEN NA18507 nsv833758 1 16168110 16339601 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1443007,nssv1443018 M 95 1 1 C1orf64,CLCNKA,CLCNKB,EPHA2,FAM131C,HSPB7,ZBTB17 nsv997887 1 16193597 16314290 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3698789 M 29084 1 0 C1orf64,CLCNKA,CLCNKB,FAM131C,HSPB7 nsv545627 1 16200009 16246917 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710806 M 17421 0 1 C1orf64,CLCNKA,CLCNKB,HSPB7 nsv517651 1 16204496 16253169 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv672518,nssv701339,nssv663351,nssv667590,nssv674154,nssv654197,nssv674326,nssv688461,nssv701973,nssv674672,nssv659185,nssv673550,nssv655929,nssv687919,nssv692440,nssv670058,nssv656190,nssv685627,nssv700288,nssv668525,nssv678289,nssv683426,nssv669004,nssv669916,nssv680788,nssv653845,nssv661818,nssv673015,nssv656487,nssv653562,nssv673768,nssv666809,nssv692238,nssv664812,nssv669108,nssv664299,nssv687387,nssv698988,nssv675618,nssv683268,nssv680689 M 2026 5 36 C1orf64,CLCNKA,CLCNKB,HSPB7 nsv520148 1 16204496 16338590 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697249 M 2026 0 1 C1orf64,CLCNKA,CLCNKB,EPHA2,FAM131C,HSPB7 nsv524045 1 16204496 16425359 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699909 M 2026 0 1 ARHGEF19,C1orf64,CLCNKA,CLCNKB,EPHA2,FAM131C,HSPB7 dgv12n27 1 16213047 16240990 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460605,nsv460618 M 1557 0 2 CLCNKA,HSPB7 HGDP00525,HGDP00971 nsv545628 1 16213047 16240990 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173778,nssv710807,nssv1173779 M 17421 1 2 CLCNKA,HSPB7 HGDP00525,HGDP00971 nsv460629 1 16213047 16253169 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537170 M 1557 1 0 CLCNKA,CLCNKB,HSPB7 HGDP01090 dgv155n54 1 16213047 16265944 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545629,nsv545633 M 17421 2 0 CLCNKA,CLCNKB,FAM131C,HSPB7 HGDP00923,HGDP01090 nsv470698 1 16213047 16269393 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547710 M 443 0 1 CLCNKA,CLCNKB,FAM131C,HSPB7 HGDP00661 esv2760188 1 16217251 16262989 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6996522,essv6996300,essv6996633,essv6996744,essv6996411 M 1109 4 1 CLCNKA,CLCNKB,FAM131C,HSPB7 SW_0061,SW_0086,SW_0786,SW_1282,SW_1480 dgv13n27 1 16219044 16249418 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460640,nsv460651 M 1557 2 0 CLCNKA,CLCNKB HGDP00906,HGDP00941 dgv156n54 1 16219044 16249418 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545632,nsv545631,nsv545630 M 17421 3 0 CLCNKA,CLCNKB HGDP00906,HGDP00934,HGDP00941 esv25815 1 16219529 16263470 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17676,esv10646 M 40 8 0 CLCNKA,CLCNKB,FAM131C NA12156,NA12489,NA12828,NA18508,NA18858,NA18861,NA18909,NA19108 dgv2n64 1 16220999 16240911 CNV gain Wang_et_al_2007 17921354 SNP array nsv818078,nsv818067 M 112 5 0 CLCNKA NA19143,NA19172,NA19173,NA19193,NA19194 nsv473735 1 16221841 16221841 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012638 M 9 1 0 CLCNKA NA19129 esv8597 1 16222299 16244484 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31038 M 1 0 0 CLCNKA,CLCNKB nsv829570 1 16231948 16276219 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426375 M 31 1 0 CLCNKA,CLCNKB,FAM131C AK6 nsv545634 1 16232866 16260100 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710808 M 17421 1 0 CLCNKA,CLCNKB,FAM131C nsv545635 1 16233074 16233468 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710836,nssv710829,nssv710819,nssv710828,nssv710830,nssv710833,nssv710831,nssv710832,nssv710835,nssv710834,nssv710837,nssv710826,nssv710818,nssv710817,nssv710827,nssv710821,nssv710822,nssv710820,nssv710816,nssv710809,nssv710825,nssv710811,nssv710810,nssv710824,nssv710814,nssv710812,nssv710823,nssv710815,nssv710813 M 17421 0 29 CLCNKA nsv545636 1 16233293 16233468 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710838 M 17421 0 1 "" esv2434454 1 16233712 16258094 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5273432 M 1 0 1 CLCNKB,FAM131C NA18507 nsv511678 1 16234015 16256717 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626316 M 1 0 1 CLCNKB 1 esv995840 1 16234677 16257931 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574114 M 3 0 1 CLCNKB,FAM131C HuRef dgv1e19 1 16235588 16261898 CNV loss Ahn_et_al_2009 19470904 Sequencing esv5593,esv5890 M 1 0 0 CLCNKB,FAM131C nsv436443 1 16235848 16256942 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466694 M 2 0 1 CLCNKB,FAM131C NA18505 dgv157n54 1 16236512 16258355 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545637,nsv545639 M 17421 2 0 CLCNKB,FAM131C esv2764186 1 16236527 16252003 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005034,essv7005032,essv7005035,essv7005031 M 1109 2 2 CLCNKB RW_0158,RW_0213,RW_0578,RW_0623 esv32650 1 16236614 16262379 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv95958,essv97715,essv93058 M 51 3 0 CLCNKB,FAM131C 21863,22127,22278 nsv441684 1 16240718 16251918 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656598,nssv1656596,nssv1656597,nssv1656599 M 270 4 0 CLCNKB NA10846,NA12144,NA18508,NA19159 esv3892192 1 16240911 16253169 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25778320,essv25799687 M 3017 0 2 CLCNKB nsv545638 1 16240911 16253402 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710840 M 17421 1 0 CLCNKB esv6377 1 16248854 16258926 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28818 M 1 0 0 CLCNKB,FAM131C esv1006289 1 16249104 16249104 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572231 M 3 1 0 CLCNKB HuRef esv1779187 1 16249105 16249105 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3873209 M 2 1 0 CLCNKB HuRef nsv545640 1 16249418 16260160 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710842 M 17421 1 0 CLCNKB,FAM131C esv3448687 1 16256252 16257850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692007 M 185 1 0 CLCNKB,FAM131C NA19239 esv1072127 1 16293810 16293810 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3733226 M 2 1 0 "" HuRef nsv833869 1 16309340 16477716 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443029 M 95 0 1 ARHGEF19,EPHA2,FBXO42,RSG1 nsv470699 1 16338590 16403303 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547711 M 443 0 1 ARHGEF19,EPHA2 HGDP00697 esv1258099 1 16363142 16363142 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4037753 M 2 1 0 "" HuRef esv1271324 1 16365234 16365294 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3655096 M 2 0 1 "" HuRef dgv2e180 1 16365251 16365322 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv993479,esv993773 M 3 0 1 "" HuRef nsv545641 1 16402636 16534014 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173785 M 17421 0 1 ARHGEF19,FBXO42,RSG1 HGDP01309 nsv3520 1 16420395 16454833 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2762 M 9 1 0 FBXO42,RSG1 NA18555 nsv545642 1 16458405 16545146 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173786 M 17421 0 1 FBXO42 HGDP00286 esv1036042 1 16510169 16510169 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3767129 M 2 1 0 FBXO42 HuRef esv2618916 1 16512355 16512407 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5350545 M 1 0 1 FBXO42 NA18507 nsv947414 1 16520495 16545369 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764539 M 97 1 0 FBXO42 HGDP00542 nsv511679 1 16559188 16563537 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626317 M 1 0 1 "" 1 nsv945790 1 16567826 16568603 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756219,nssv1756262,nssv1756228,nssv1756281,nssv1756237,nssv1756282,nssv1756208,nssv1756253,nssv1756224,nssv1756250,nssv1756212,nssv1756261,nssv1756210,nssv1756233,nssv1756207,nssv1756241,nssv1756209,nssv1756252,nssv1756234,nssv1756271,nssv1756220,nssv1756255,nssv1756290,nssv1756276,nssv1756288,nssv1756263,nssv1756283,nssv1756278,nssv1756291,nssv1756236,nssv1756227,nssv1756245,nssv1756218,nssv1756272,nssv1756216,nssv1756266,nssv1756289,nssv1756249,nssv1756235,nssv1756243,nssv1756230,nssv1756229,nssv1756223,nssv1756297,nssv1756225,nssv1756300,nssv1756285,nssv1756238,nssv1756217,nssv1756295,nssv1756222,nssv1756299,nssv1756213,nssv1756257,nssv1756215,nssv1756265,nssv1756226,nssv1756270,nssv1756286,nssv1756206,nssv1756211,nssv1756279,nssv1756221,nssv1756244,nssv1756214,nssv1756232,nssv1756284,nssv1756302,nssv1756292,nssv1756260,nssv1756287,nssv1756246,nssv1756301,nssv1756242,nssv1756240,nssv1756277,nssv1756254,nssv1756275,nssv1756251,nssv1756239,nssv1756268,nssv1756274,nssv1756248,nssv1756269,nssv1756293,nssv1756264,nssv1756267,nssv1756298,nssv1756259,nssv1756294,nssv1756280,nssv1756256,nssv1756231,nssv1756296,nssv1756258,nssv1756273,nssv1756247 M 97 10 0 SZRD1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv829581 1 16621237 16627622 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1421445 M 31 0 1 SPATA21 NA18997 esv1035588 1 16623300 16623300 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3853896 M 2 1 0 SPATA21 HuRef dgv19n67 1 16623746 16627622 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv829592,nsv829603 M 31 0 3 SPATA21 AK14,AK6,NA18969 esv2758925 1 16636920 17356568 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757725,esv2756838 M 270 182 33 ATP13A2,CROCC,CROCCP2,CROCCP3,ESPNP,LOC729574,MFAP2,MIR3675,MST1L,MST1P2,NBPF1,NECAP2,PADI2,SDHB NA06991,NA06993,NA07000,NA07019,NA07022,NA07034,NA07048,NA07055,NA07357,NA10830,NA10831,NA10847,NA10851,NA10855,NA10860,NA10861,NA10863,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12043,NA12044,NA12056,NA12144,NA12146,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12707,NA12717,NA12740,NA12750,NA12751,NA12753,NA12760,NA12762,NA12763,NA12801,NA12812,NA12813,NA12864,NA12865,NA12872,NA12873,NA12875,NA12878,NA12891,NA18500,NA18501,NA18502,NA18503,NA18504,NA18505,NA18506,NA18507,NA18515,NA18516,NA18517,NA18521,NA18522,NA18523,NA18526,NA18529,NA18540,NA18542,NA18545,NA18547,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18570,NA18571,NA18577,NA18579,NA18582,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18623,NA18632,NA18635,NA18636,NA18637,NA18853,NA18854,NA18855,NA18856,NA18863,NA18870,NA18872,NA18913,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18967,NA18968,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19098,NA19099,NA19100,NA19101,NA19103,NA19116,NA19119,NA19120,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19139,NA19140,NA19142,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19173,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19221,NA19222,NA19223,NA19238,NA19239 nsv428421 1 16636920 17356568 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv454343,nssv454509,nssv454421,nssv454276,nssv454310,nssv454299,nssv454410,nssv454354,nssv454321,nssv454398,nssv454487,nssv454332,nssv454376,nssv454521,nssv454365,nssv454465,nssv454498,nssv454454,nssv454265,nssv454432,nssv454387,nssv454443,nssv454476 M 62 17 6 ATP13A2,CROCC,CROCCP2,CROCCP3,ESPNP,LOC729574,MFAP2,MIR3675,MST1L,MST1P2,NBPF1,NECAP2,PADI2,SDHB HGDP00449,HGDP00450,HGDP00460,HGDP00462,HGDP00463,HGDP00467,HGDP00472,HGDP00476,HGDP00984,HGDP00986,HGDP01086,HGDP01088,HGDP01093,HGDP01094,NA18498,NA18916,NA19096,NA19147,NA19181,NA19225,NA19257 dgv1n68 1 16638358 16809279 CNV loss Wong_et_al_2007 17160897 BAC aCGH nsv833980,nsv834092 M 95 0 8 CROCCP3,MIR3675,NBPF1,NECAP2 nsv9213 1 16649604 16652120 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv13424,nssv15103,nssv12118 M 31 0 3 NECAP2 NA18504,NA18517,NA19144 dgv39n100 1 16650266 17164469 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012639,nsv1012519,nsv1004738,nsv1011657,nsv1013995,nsv1005562,nsv1005491,nsv1000484,nsv1001569,nsv1003293,nsv1003077,nsv1015127,nsv1014379,nsv1005184,nsv1014635,nsv1000113,nsv1014522,nsv1009669,nsv1005297,nsv1013089,nsv1011646,nsv1001032,nsv1002322,nsv1002985,nsv998739,nsv1012031,nsv1012642,nsv1010082,nsv1007741,nsv1008783,nsv1004894,nsv998219 M 29084 50 0 CROCC,CROCCP2,CROCCP3,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1,NECAP2 dgv40n100 1 16669308 16859426 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013886,nsv1008610,nsv1006224,nsv998355,nsv997628 M 29084 5 0 CROCCP2,CROCCP3,MIR3675,MST1P2,NBPF1 nsv9324 1 16669734 17153811 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv13096,nssv12758,nssv15754,nssv13422,nssv14091,nssv12766,nssv14421,nssv13754,nssv14430,nssv12428,nssv28922,nssv13090,nssv13749,nssv13420,nssv13750,nssv15438,nssv14080,nssv14410,nssv13092,nssv12116,nssv12098,nssv14740,nssv14415,nssv13742,nssv14085,nssv13752,nssv13104,nssv15104,nssv12753,nssv12097,nssv13419,nssv15779,nssv15768,nssv16098,nssv12778,nssv12440,nssv12448,nssv15424,nssv14760,nssv16414,nssv11768,nssv11785,nssv14100,nssv14084,nssv14414,nssv29255,nssv14744,nssv29254,nssv11767,nssv16763,nssv16084,nssv13756,nssv13761,nssv13089,nssv17093,nssv17423,nssv14082,nssv13426 M 31 11 17 CROCC,CROCCP2,CROCCP3,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 NA07029,NA07048,NA10839,NA10847,NA11830,NA12155,NA12740,NA12802,NA18502,NA18517,NA18537,NA18552,NA18564,NA18853,NA18860,NA18972,NA18975,NA18980,NA19007,NA19144,NA19173,NA19221 nsv436814 1 16678681 16822828 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465509 M 2 1 0 CROCCP2,CROCCP3,MIR3675,NBPF1 NA18505 esv2750816 1 16681281 16902301 CNV gain Pinto_et_al_2007 17911159 SNP array essv6981188,essv6985510 M 771 2 0 CROCCP2,CROCCP3,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 BEC_362 nsv159668 1 16682453 16684183 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178246 M 24 CROCCP3 nsv945793 1 16683850 16836231 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756554,nssv1756366,nssv1756331,nssv1756373,nssv1756559,nssv1756364,nssv1756338,nssv1756362,nssv1756342,nssv1756357,nssv1756398,nssv1756372,nssv1756557,nssv1756378,nssv1756328,nssv1756387,nssv1756349,nssv1756356,nssv1756326,nssv1756354,nssv1756329,nssv1756394,nssv1756556,nssv1756381,nssv1756333,nssv1756345,nssv1756321,nssv1756383,nssv1756324,nssv1756360,nssv1756558,nssv1756367,nssv1756348,nssv1756389,nssv1756336,nssv1756353,nssv1756334,nssv1756350,nssv1756351,nssv1756347,nssv1756555,nssv1756396,nssv1756341,nssv1756355,nssv1756323,nssv1756395,nssv1756344,nssv1756365,nssv1756339,nssv1756375,nssv1756337,nssv1756376,nssv1756399,nssv1756568,nssv1756332,nssv1756361,nssv1756327,nssv1756386,nssv1756330,nssv1756380,nssv1756325,nssv1756369,nssv1756340,nssv1756385,nssv1756400,nssv1756392,nssv1756322,nssv1756566,nssv1756335,nssv1756390,nssv1756397,nssv1756563,nssv1756393,nssv1756560,nssv1756379,nssv1756377,nssv1756363,nssv1756569,nssv1756565,nssv1756320,nssv1756561,nssv1756370,nssv1756384,nssv1756352,nssv1756371,nssv1756359,nssv1756391,nssv1756368,nssv1756346,nssv1756374,nssv1756567,nssv1756343,nssv1756388,nssv1756358,nssv1756562,nssv1756564,nssv1756382 M 97 10 0 CROCCP2,CROCCP3,MIR3675,NBPF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv1e203 1 16686508 17134834 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array esv2763736,esv2764199 M 1109 115 105 CROCC,CROCCP2,CROCCP3,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 RW_0003,RW_0007,RW_0020,RW_0021,RW_0023,RW_0030,RW_0032,RW_0034,RW_0041,RW_0043,RW_0046,RW_0047,RW_0054,RW_0060,RW_0063,RW_0068,RW_0069,RW_0078,RW_0084,RW_0085,RW_0087,RW_0093,RW_0098,RW_0099,RW_0101,RW_0105,RW_0106,RW_0108,RW_0110,RW_0112,RW_0120,RW_0146,RW_0148,RW_0156,RW_0158,RW_0161,RW_0162,RW_0169,RW_0173,RW_0178,RW_0179,RW_0180,RW_0183,RW_0186,RW_0187,RW_0190,RW_0191,RW_0192,RW_0194,RW_0195,RW_0196,RW_0210,RW_0212,RW_0215,RW_0216,RW_0217,RW_0218,RW_0221,RW_0233,RW_0234,RW_0250,RW_0251,RW_0255,RW_0257,RW_0258,RW_0268,RW_0272,RW_0281,RW_0288,RW_0289,RW_0293,RW_0296,RW_0309,RW_0310,RW_0311,RW_0314,RW_0315,RW_0318,RW_0321,RW_0324,RW_0327,RW_0333,RW_0335,RW_0346,RW_0348,RW_0354,RW_0357,RW_0359,RW_0361,RW_0520,RW_0521,RW_0525,RW_0526,RW_0531,RW_0536,RW_0540,RW_0545,RW_0546,RW_0552,RW_0558,RW_0559,RW_0560,RW_0567,RW_0570,RW_0573,RW_0574,RW_0583,RW_0585,RW_0593,RW_0599,RW_0603,RW_0604,RW_0615,RW_0620,RW_0631,RW_0640,RW_0643,RW_0648,RW_0655,RW_0658,RW_0664,RW_0666,SW_0002,SW_0009,SW_0046,SW_0057,SW_0058,SW_0060,SW_0062,SW_0077,SW_0089,SW_0116,SW_0146,SW_0147,SW_0149,SW_0173,SW_0185,SW_0230,SW_0253,SW_0257,SW_0269,SW_0375,SW_0605,SW_0638,SW_0639,SW_0659,SW_0757,SW_0759,SW_0801,SW_0803,SW_0829,SW_0833,SW_0834,SW_0859,SW_0885,SW_1012,SW_1045,SW_1064,SW_1074,SW_1083,SW_1095,SW_1100,SW_1106,SW_1111,SW_1112,SW_1118,SW_1124,SW_1137,SW_1149,SW_1153,SW_1166,SW_1167,SW_1176,SW_1180,SW_1190,SW_1196,SW_1198,SW_1201,SW_1213,SW_1240,SW_1242,SW_1277,SW_1282,SW_1295,SW_1305,SW_1306,SW_1323,SW_1325,SW_1327,SW_1340,SW_1354,SW_1356,SW_1365,SW_1367,SW_1371,SW_1402,SW_1404,SW_1405,SW_1406,SW_1424,SW_1428,SW_1433,SW_1435,SW_1436,SW_1438,SW_1439,SW_1443,SW_1450,SW_1456,SW_1467,SW_1472,SW_1478,SW_1503,SW_1527 nsv1003019 1 16692208 16859426 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468388 M 29084 0 1 CROCCP2,MIR3675,MST1P2,NBPF1 dgv41n100 1 16692208 16921054 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003672,nsv999526,nsv1002278,nsv1002854,nsv1007277,nsv1006305,nsv1010382,nsv1006607,nsv1013208 M 29084 15 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 dgv46e59 1 16693852 16695050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3359930,esv3429753 M 185 2 0 "" NA19239,NA19240 esv33046 1 16694145 16885111 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv97938,essv95236,essv97341,essv101021,essv96456,essv95920,essv101566,essv94690,essv96254,essv101730,essv98327 M 51 0 11 CROCCP2,LOC729574,MIR3675,MST1P2,NBPF1 21603,21693,21772,21791,21837,21872,21879,21909,21911,22261,22371 dgv42n100 1 16701089 17097800 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008791,nsv1012439,nsv1005499 M 29084 0 3 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 dgv43n100 1 16703395 16843031 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009058,nsv1014927,nsv1013868,nsv1006860,nsv1014444,nsv1008752 M 29084 0 7 CROCCP2,MIR3675,NBPF1 dgv44n100 1 16703395 16859426 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999004,nsv1006306,nsv1008952,nsv1013085,nsv1012518 M 29084 18 5 CROCCP2,MIR3675,MST1P2,NBPF1 dgv47e59 1 16704152 16716350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3380800,esv3431489,esv3342628,esv3385063,esv3383407 M 185 5 0 "" NA12878,NA12891,NA12892,NA19238,NA19240 dgv20n67 1 16704467 16979088 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829614,nsv821710,nsv829636,nsv821699 M 31 4 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 NA18564,NA18570,NA18973,NA18997 nsv821511 1 16704467 16979088 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420247 M 1 1 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 NA10851 nsv829625 1 16704467 17154340 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436329,nssv1428017,nssv1434862,nssv1433412,nssv1427247,nssv1437217,nssv1431796,nssv1423110,nssv1428819,nssv1423946,nssv1423407 M 31 11 0 CROCC,CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 AK10,AK12,AK20,AK8,NA18526,NA18542,NA18582,NA18942,NA18949,NA18968,NA18999 esv3367641 1 16704952 16708650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692016 M 185 1 0 "" NA19239 esv29642 1 16705673 16998216 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19804,esv16441,esv11265,esv17374,esv10634,esv15698,esv18078,esv12183,esv17891,esv20185,esv13221,esv17903,esv12048,esv20857,esv20432,esv18819 M 40 26 20 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 NA07045,NA11894,NA11931,NA11993,NA12004,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510,NA18502,NA18505,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv3385457 1 16709152 16716350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692021 M 185 1 0 "" NA19239 nsv472863 1 16716337 16716337 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012769 M 9 1 0 "" NA18555 dgv45n100 1 16717507 16987287 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997565,nsv1001395,nsv1013347,nsv1007961,nsv997605,nsv999889,nsv1005752,nsv1005144,nsv1002636,nsv998414,nsv1002291,nsv1003068,nsv999128 M 29084 31 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 nsv1001952 1 16724089 16817916 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471132,nssv3698800 M 29084 1 1 CROCCP2,MIR3675,NBPF1 dgv48e59 1 16727252 16736650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3407285,esv3429655,esv3421741,esv3441445 M 185 4 0 "" NA12878,NA12891,NA19238,NA19240 dgv49e59 1 16730352 16875450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3413552,esv3387438,esv3385432,esv3442238,esv3326076 M 185 5 0 CROCCP2,LOC729574,MIR3675,MST1P2,NBPF1 NA12878,NA12891,NA12892,NA19238,NA19239 dgv50e59 1 16737152 16747050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3432763,esv3434952 M 185 2 0 "" NA12892,NA19240 nsv834203 1 16738731 16782708 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443229,nssv1443185,nssv1443207,nssv1443173,nssv1443196,nssv1443162,nssv1443251,nssv1443240,nssv1443129,nssv1443218,nssv1443151,nssv1443140 M 95 0 12 MIR3675,NBPF1 dgv46n100 1 16743853 16842575 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013756,nsv1007618,nsv1001753 M 29084 4 0 CROCCP2,MIR3675,NBPF1 dgv47n100 1 16743853 16843031 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010358,nsv1010074,nsv1006099,nsv999682,nsv1006638,nsv1005136,nsv1006436 M 29084 28 40 CROCCP2,MIR3675,NBPF1 dgv48n100 1 16743853 16878553 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010727,nsv1001617,nsv998751,nsv1003878 M 29084 70 15 CROCCP2,LOC729574,MIR3675,MST1P2,NBPF1 dgv49n100 1 16743853 16909672 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005045,nsv1010269 M 29084 0 2 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 dgv50n100 1 16743853 16921054 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009886,nsv1004053,nsv1011759,nsv1003580,nsv1006615,nsv998027,nsv1005327,nsv1004005,nsv1010976,nsv1006444,nsv1007868,nsv1014352,nsv998387,nsv1009923,nsv1009214,nsv1010594,nsv1007096,nsv998882 M 29084 52 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 nsv1004807 1 16743853 16921054 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466840,nssv3471542,nssv3464100,nssv3479470,nssv3475171,nssv3470380,nssv3698840,nssv3478386,nssv3463963,nssv3476359,nssv3698841,nssv3479728,nssv3469069,nssv3476612,nssv3465078,nssv3480143,nssv3477768,nssv3465762,nssv3471748,nssv3466295,nssv3463008,nssv3481280,nssv3465901,nssv3473766,nssv3474865,nssv3464998,nssv3468826,nssv3476305,nssv3475762,nssv3480403,nssv3470590,nssv3463087,nssv3465243,nssv3472288,nssv3474409,nssv3482004,nssv3481898,nssv3478560,nssv3469188,nssv3477919,nssv3468750 M 29084 39 2 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 dgv51n100 1 16743853 16987287 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009098,nsv1000693,nsv1013819,nsv1011045,nsv1001344 M 29084 0 5 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 dgv52n100 1 16743853 16987287 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010821,nsv1003927,nsv1006241 M 29084 12 4 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 dgv53n100 1 16743853 17050540 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007622,nsv998951,nsv999991,nsv1010634 M 29084 0 4 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 dgv54n100 1 16743853 17087397 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008201,nsv999605,nsv1009896,nsv1011684,nsv1006764,nsv1002009 M 29084 11 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 dgv55n100 1 16743853 17148816 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004542,nsv1006011,nsv1013996,nsv999702,nsv999140,nsv1000023,nsv1014932,nsv1009019 M 29084 42 8 CROCC,CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 esv3429389 1 16747352 16768450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692033 M 185 1 0 MIR3675,NBPF1 NA19240 nsv499577 1 16751952 16879556 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585483 M 9 0 0 CROCCP2,LOC729574,MST1P2,NBPF1 nsv7173 1 16758161 17136901 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10485,nssv5304,nssv1777,nssv9355,nssv5314,nssv10882,nssv11237,nssv929,nssv9405,nssv747,nssv1893,nssv10890,nssv10507,nssv9949,nssv9682,nssv1903,nssv3851,nssv3861,nssv1863,nssv1910,nssv3885,nssv10523,nssv5331,nssv9691,nssv657,nssv6334 M 9 0 0 CROCC,CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv3632 1 16758433 16793011 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9681,nssv5295,nssv3801,nssv6260,nssv564,nssv2682,nssv11241 M 9 7 0 NBPF1 NA12156,NA12878,NA15510,NA18507,NA18555,NA19129,NA19240 dgv56n100 1 16758710 16843031 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010184,nsv1012484,nsv1004437,nsv997666,nsv1000986 M 29084 0 6 CROCCP2,NBPF1 nsv834247 1 16759150 16869758 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1443329,nssv1443340,nssv1443284,nssv1443273,nssv1443373,nssv1443318,nssv1443362,nssv1443296,nssv1443307,nssv1443384,nssv1443262,nssv1443351 M 95 1 11 CROCCP2,MST1P2,NBPF1 nsv221 1 16760883 16764275 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv221 M 1 1 0 NBPF1 NA15510 nsv471343 1 16762999 16791276 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548027,nssv548025,nssv548026 M 3 3 0 NBPF1 JDW,NA18507,YH nsv471344 1 16762999 16812569 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548030,nssv548028,nssv548029 M 3 3 0 NBPF1 JDW,NA18507,YH nsv482190 1 16762999 16812569 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558551 M 1 1 0 NBPF1 KB1 nsv945569 1 16763094 16764651 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2568995,nssv2569067,nssv2569068,nssv2569063,nssv2568978,nssv2569013,nssv2568970,nssv2569033,nssv2569066,nssv2569027,nssv2568992,nssv2569017,nssv2568973,nssv2568997,nssv2569003,nssv2569038,nssv2569053,nssv2569015,nssv2568985,nssv2569004,nssv2569060,nssv2569007,nssv2569047,nssv2569025,nssv2569064,nssv2569029,nssv2568974,nssv2569040,nssv2568986,nssv2569045,nssv2569048,nssv2569041,nssv2569046,nssv2569023,nssv2568972,nssv2569062,nssv2568982,nssv2569031,nssv2568984,nssv2568996,nssv2569001,nssv2569030,nssv2569055,nssv2569058,nssv2568991,nssv2569042,nssv2568976,nssv2569035,nssv2569050,nssv2569022,nssv2568981,nssv2569039,nssv2568990,nssv2569028,nssv2568975,nssv2568994,nssv2568993,nssv2569016,nssv2568987,nssv2569006,nssv2569049,nssv2569020,nssv2568971,nssv2569024,nssv2569000,nssv2569005,nssv2569056,nssv2569012,nssv2569052,nssv2569008,nssv2568979,nssv2569037,nssv2568983,nssv2569002,nssv2568980,nssv2569061,nssv2568989,nssv2569044,nssv2569051,nssv2569034,nssv2569018,nssv2568969,nssv2569026,nssv2569014,nssv2569009,nssv2569019,nssv2569059,nssv2569069,nssv2568998,nssv2569011,nssv2569057,nssv2569036 M 97 10 0 NBPF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv514916 1 16764035 16766562 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2853167,nssv2853156,nssv2853188,nssv2853157,nssv2853177,nssv2853158,nssv2853207,nssv2853159,nssv2853198,nssv2853002,nssv2853176,nssv2851624,nssv2853197,nssv2851691,nssv2853184,nssv2852968,nssv2853187,nssv2853091,nssv2853181,nssv2852964,nssv2853168,nssv2853134,nssv2853206,nssv2851690,nssv2853169,nssv2853067,nssv2853165,nssv2853088,nssv2853190,nssv2852971,nssv2853185,nssv2851655,nssv2853201,nssv2851653,nssv2853183,nssv2851747,nssv2853182,nssv2851640,nssv2853170,nssv2852940,nssv2853163,nssv2853118,nssv2853195,nssv2853080,nssv2853202,nssv2853077,nssv2853186,nssv2851776,nssv2853194,nssv2851736,nssv2853164,nssv2851703,nssv2853199,nssv2851805,nssv2853162,nssv2853015,nssv2853189,nssv2851800,nssv2853171,nssv2853033,nssv2853174,nssv2851673,nssv2853196,nssv2851663,nssv2853175,nssv2851643,nssv2853200,nssv2851790,nssv2853172,nssv2852951,nssv2853204,nssv2853127,nssv2853205,nssv2852936,nssv2853178,nssv2852937,nssv2853166,nssv2851779,nssv2853192,nssv2851802,nssv2853191,nssv2853051,nssv2853203,nssv2852965,nssv2853161,nssv2851700,nssv2853180,nssv2853046,nssv2853179,nssv2851795,nssv2853173,nssv2851741,nssv2853193,nssv2853133,nssv2851661,nssv2851698,nssv2853096,nssv2851751,nssv2851619,nssv2852931,nssv2852963,nssv2851625,nssv2853031,nssv2853009,nssv2853140,nssv2853035,nssv2851616,nssv2851628,nssv2851729,nssv2851769,nssv2851757,nssv2853020,nssv2852960,nssv2851808,nssv2853014,nssv2853147,nssv2853007,nssv2853141,nssv2851789,nssv2851813,nssv2851638,nssv2853103,nssv2853099,nssv2853128,nssv2851705,nssv2852979,nssv2853111,nssv2851803,nssv2851695,nssv2852989,nssv2853104,nssv2851685,nssv2853003,nssv2851767,nssv2851758,nssv2851631,nssv2852957,nssv2851766,nssv2851670,nssv2851623,nssv2853125,nssv2853013,nssv2852973,nssv2853072,nssv2853138,nssv2851759,nssv2853083,nssv2851726,nssv2852925,nssv2851716,nssv2853061,nssv2851787,nssv2853017,nssv2851731,nssv2852952,nssv2851780,nssv2853053,nssv2852958,nssv2851797,nssv2852997,nssv2852934,nssv2853064,nssv2851742,nssv2851633,nssv2853071,nssv2851706,nssv2852943,nssv2853090,nssv2851702,nssv2853131,nssv2853113,nssv2851734,nssv2851635,nssv2851730,nssv2852956,nssv2851648,nssv2851719,nssv2851801,nssv2853076,nssv2851659,nssv2851738,nssv2851711,nssv2853144,nssv2851788,nssv2853029,nssv2851636,nssv2852945,nssv2851649,nssv2851720,nssv2852992,nssv2852938,nssv2851755,nssv2853114,nssv2853115,nssv2851674,nssv2851814,nssv2852932,nssv2853030,nssv2851678,nssv2853126,nssv2851810,nssv2852987,nssv2853139,nssv2851806,nssv2853019,nssv2852998,nssv2853084,nssv2851768,nssv2852929,nssv2851650,nssv2851739,nssv2853000,nssv2851798,nssv2853059,nssv2851680,nssv2851714,nssv2853102,nssv2851783,nssv2853106,nssv2853117,nssv2852976,nssv2852985,nssv2851656,nssv2851772,nssv2852948,nssv2851689,nssv2852983,nssv2851651,nssv2853146,nssv2852975,nssv2851642,nssv2852928,nssv2853081,nssv2853110,nssv2853024,nssv2853069,nssv2853022,nssv2851732,nssv2851811,nssv2853160,nssv2853143,nssv2851786,nssv2851668,nssv2852996,nssv2851652,nssv2851687,nssv2853074,nssv2851701,nssv2851740,nssv2851773,nssv2851763,nssv2852980,nssv2852981,nssv2853132,nssv2851617,nssv2851804,nssv2851646,nssv2852990,nssv2853045,nssv2851666,nssv2851641,nssv2851750,nssv2853065,nssv2853129,nssv2853122,nssv2851667,nssv2851662,nssv2853119,nssv2853005,nssv2852959,nssv2851634,nssv2853062,nssv2852941,nssv2851746,nssv2853142,nssv2851782,nssv2853026,nssv2851618,nssv2851658,nssv2851684,nssv2851614,nssv2851657,nssv2851704,nssv2853039,nssv2853108,nssv2851713,nssv2851622,nssv2852991,nssv2851712,nssv2853097,nssv2853130,nssv2851644,nssv2852972,nssv2851745,nssv2851792,nssv2853011,nssv2853016,nssv2851613,nssv2851672,nssv2851722,nssv2853034,nssv2851762,nssv2853050,nssv2852930,nssv2851761,nssv2851694,nssv2853098,nssv2851725,nssv2853145,nssv2853063,nssv2851735,nssv2851727,nssv2852966,nssv2853044,nssv2853006,nssv2852935,nssv2853116,nssv2851686,nssv2853054,nssv2853152,nssv2851775,nssv2853047,nssv2851718,nssv2852924,nssv2851799,nssv2853027,nssv2851807,nssv2853092,nssv2851647,nssv2853012,nssv2852949,nssv2852984,nssv2853155,nssv2851815,nssv2853109,nssv2853023,nssv2853037,nssv2853066,nssv2851620,nssv2852999,nssv2852927,nssv2851737,nssv2853148,nssv2851756,nssv2853094,nssv2853010,nssv2853093,nssv2851723,nssv2853021,nssv2852961,nssv2851774,nssv2851796,nssv2851699,nssv2852955,nssv2852950,nssv2851743,nssv2853032,nssv2851693,nssv2851771,nssv2851682,nssv2853123,nssv2851707,nssv2851675,nssv2852954,nssv2852988,nssv2852933,nssv2851676,nssv2851639,nssv2852967,nssv2851708,nssv2851709,nssv2852978,nssv2851621,nssv2851728,nssv2852993,nssv2853095,nssv2852977,nssv2851781,nssv2853055,nssv2851665,nssv2853040,nssv2851765,nssv2853058,nssv2851688,nssv2853086,nssv2851793,nssv2851778,nssv2851717,nssv2853079,nssv2853085,nssv2852947,nssv2853089,nssv2851677,nssv2852939,nssv2851632,nssv2851627,nssv2853124,nssv2853154,nssv2852953,nssv2852946,nssv2851748,nssv2853052,nssv2853137,nssv2853025,nssv2852962,nssv2851669,nssv2853121,nssv2851629,nssv2853107,nssv2853153,nssv2852970,nssv2851654,nssv2853101,nssv2853004,nssv2851710,nssv2853008,nssv2851749,nssv2851760,nssv2851681,nssv2851744,nssv2853057,nssv2853038,nssv2853028,nssv2851692,nssv2851645,nssv2853036,nssv2853087,nssv2852926,nssv2853043,nssv2851664,nssv2853135,nssv2853068,nssv2853136,nssv2851615,nssv2851753,nssv2851679,nssv2853149,nssv2851794,nssv2853042,nssv2851764,nssv2851683,nssv2851777,nssv2851696,nssv2853151,nssv2851626,nssv2851770,nssv2851724,nssv2852994,nssv2852986,nssv2853056,nssv2851697,nssv2852942,nssv2853049,nssv2853070,nssv2852944,nssv2853041,nssv2853100,nssv2853078,nssv2852982,nssv2851809,nssv2851754,nssv2851785,nssv2851630,nssv2851812,nssv2851752,nssv2853150,nssv2851637,nssv2853082,nssv2851660,nssv2853075,nssv2853112,nssv2851721,nssv2853120,nssv2851733,nssv2853105,nssv2851715,nssv2853073,nssv2852995,nssv2853001,nssv2852974,nssv2852969,nssv2853048,nssv2851671,nssv2851784,nssv2852923,nssv2851791,nssv2853018,nssv2853060 M 2366 488 0 NBPF1 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv945570 1 16764651 16766267 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569077,nssv2569995,nssv2569990,nssv2569980,nssv2570001,nssv2569125,nssv2569093,nssv2569117,nssv2569073,nssv2569137,nssv2569088,nssv2570005,nssv2569992,nssv2569133,nssv2569101,nssv2569129,nssv2570004,nssv2569108,nssv2569985,nssv2570003,nssv2569096,nssv2569123,nssv2569082,nssv2569134,nssv2569984,nssv2569982,nssv2569074,nssv2569126,nssv2569079,nssv2569136,nssv2569993,nssv2569999,nssv2569075,nssv2569976,nssv2569078,nssv2569975,nssv2569104,nssv2569132,nssv2569986,nssv2569113,nssv2569085,nssv2569981,nssv2569089,nssv2569100,nssv2569991,nssv2569112,nssv2569071,nssv2569130,nssv2569987,nssv2569127,nssv2569083,nssv2569099,nssv2569092,nssv2569122,nssv2569091,nssv2569119,nssv2569983,nssv2569124,nssv2569072,nssv2569974,nssv2569996,nssv2569997,nssv2569081,nssv2569135,nssv2569080,nssv2569103,nssv2569086,nssv2569111,nssv2569090,nssv2569095,nssv2569102,nssv2569070,nssv2570002,nssv2569110,nssv2569094,nssv2569105,nssv2569084,nssv2569118,nssv2569988,nssv2569115,nssv2569116,nssv2569107,nssv2569998,nssv2569121,nssv2569977,nssv2569994,nssv2569114,nssv2569097,nssv2570006,nssv2569128,nssv2569979,nssv2569106 M 97 10 0 NBPF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3419518 1 16764886 16764886 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808928 M 185 1 0 NBPF1 NA12878 nsv435932 1 16764976 16765094 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465620 M 2 1 0 NBPF1 NA15510 nsv159149 1 16765080 16766617 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177727 M 24 NBPF1 nsv436039 1 16765276 16765332 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465731 M 2 1 0 NBPF1 NA15510 nsv945571 1 16766267 16767105 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570030,nssv2570081,nssv2570025,nssv2570065,nssv2570020,nssv2570093,nssv2570100,nssv2570069,nssv2570014,nssv2570090,nssv2570023,nssv2570053,nssv2570106,nssv2570016,nssv2570034,nssv2570089,nssv2570041,nssv2570078,nssv2570029,nssv2570048,nssv2570098,nssv2570067,nssv2570042,nssv2570072,nssv2570043,nssv2570063,nssv2570031,nssv2570094,nssv2570096,nssv2570079,nssv2570015,nssv2570052,nssv2570009,nssv2570084,nssv2570102,nssv2570056,nssv2570024,nssv2570080,nssv2570027,nssv2570074,nssv2570104,nssv2570091,nssv2570040,nssv2570059,nssv2570046,nssv2570075,nssv2570039,nssv2570057,nssv2570035,nssv2570017,nssv2570028,nssv2570054,nssv2570021,nssv2570018,nssv2570026,nssv2570068,nssv2570037,nssv2570107,nssv2570105,nssv2570049,nssv2570032,nssv2570013,nssv2570038,nssv2570070,nssv2570101,nssv2570087,nssv2570097,nssv2570073,nssv2570036,nssv2570083,nssv2570050,nssv2570085,nssv2570051,nssv2570092,nssv2570103,nssv2570082,nssv2570095,nssv2570010,nssv2570019,nssv2570076,nssv2570064,nssv2570086,nssv2570058,nssv2570061,nssv2570012,nssv2570047,nssv2570045,nssv2570007,nssv2570008,nssv2570062,nssv2570060,nssv2570071 M 97 10 0 NBPF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945572 1 16767709 16793448 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570118,nssv2570151,nssv2570130,nssv2570157,nssv2570194,nssv2570148,nssv2570190,nssv2570166,nssv2570131,nssv2570175,nssv2570125,nssv2570158,nssv2570112,nssv2570170,nssv2570119,nssv2570171,nssv2570192,nssv2570142,nssv2570128,nssv2570163,nssv2570139,nssv2570184,nssv2570195,nssv2570145,nssv2570188,nssv2570180,nssv2570189,nssv2570144,nssv2570113,nssv2570138,nssv2570185,nssv2570174,nssv2570133,nssv2570164,nssv2570129,nssv2570149,nssv2570191,nssv2570147,nssv2570115,nssv2570182,nssv2570140,nssv2570159,nssv2570109,nssv2570183,nssv2570114,nssv2570146,nssv2570135,nssv2570162,nssv2570123,nssv2570136,nssv2570116,nssv2570168,nssv2570122,nssv2570181,nssv2570117,nssv2570169,nssv2570126,nssv2570108,nssv2570127,nssv2570173,nssv2570193,nssv2570153,nssv2570120,nssv2570155,nssv2570186,nssv2570137,nssv2570124,nssv2570167,nssv2570111,nssv2570179,nssv2570134,nssv2570178,nssv2570156,nssv2570160,nssv2570172,nssv2570152,nssv2570177,nssv2570141,nssv2570150,nssv2570161 M 97 10 0 NBPF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545643 1 16767863 16817945 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710843 M 17421 0 1 CROCCP2,NBPF1 esv34697 1 16767863 16918233 CNV gain Pinto_et_al_2007 17911159 SNP array essv6979544,essv6986884,essv6990378 M 771 3 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 NA18570 esv3444386 1 16768952 16849150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692035 M 185 1 0 CROCCP2,MST1P2,NBPF1 NA19240 nsv3743 1 16772086 16818208 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv835,nssv3842 M 9 0 2 CROCCP2,NBPF1 NA12878,NA19240 dgv1n16 1 16781280 16788232 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv435920,nsv436307 M 2 0 2 NBPF1 NA15510,NA18505 dgv57n100 1 16782184 16842753 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014127,nsv1006221 M 29084 0 3 CROCCP2,NBPF1 dgv58n100 1 16782184 16859426 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003821,nsv1013966,nsv1006493,nsv1000320,nsv1004735 M 29084 14 16 CROCCP2,MST1P2,NBPF1 nsv1008129 1 16782184 16885360 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475183,nssv3466515 M 29084 1 1 CROCCP2,LOC729574,MIR3675,MST1P2,NBPF1 dgv59n100 1 16782184 16894856 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001891,nsv1011340,nsv1008114,nsv1006458,nsv1006137 M 29084 6 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 dgv60n100 1 16782184 16902820 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997399,nsv1013734 M 29084 0 2 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 dgv61n100 1 16782184 16921054 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006602,nsv1011002,nsv999929,nsv999541,nsv1010704 M 29084 32 7 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 dgv62n100 1 16782184 16966641 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009059,nsv1005218,nsv1005387,nsv1007115,nsv998373 M 29084 8 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 dgv63n100 1 16782184 17155662 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005462,nsv1013554,nsv1002264,nsv1008466,nsv1003788,nsv1006712,nsv1012664,nsv1012813,nsv999319,nsv1015052,nsv1004375,nsv1006276,nsv1011167,nsv1013560,nsv1002158 M 29084 22 0 CROCC,CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 nsv160674 1 16783342 16789645 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179252 M 24 NBPF1 esv2597795 1 16795117 16841025 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5337771 M 1 1 0 CROCCP2,NBPF1 NA18507 dgv64n100 1 16795587 16843031 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004732,nsv1013386,nsv1004813 M 29084 0 6 CROCCP2,NBPF1 nsv998073 1 16795587 16843031 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3698883,nssv3476266,nssv3470797,nssv3463501,nssv3479724,nssv3473772,nssv3474789,nssv3471934 M 29084 1 7 CROCCP2,NBPF1 dgv65n100 1 16795587 16987287 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008595,nsv1005235,nsv1002975,nsv1009781,nsv997416,nsv1013754,nsv1001363 M 29084 9 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2,NBPF1 nsv469795 1 16795827 16882680 CNV gain+loss Locke_et_al_2006 16826518 BAC aCGH nssv1675932,nssv1673499,nssv1674398,nssv1673154,nssv1672293,nssv1675154,nssv1675645,nssv1675644,nssv1675328,nssv1674269,nssv1674737,nssv1676008,nssv1674784,nssv1672656,nssv1673678,nssv1676473,nssv1674594,nssv1673449,nssv1676452,nssv1673729,nssv1673599,nssv1672511,nssv1676098,nssv1673422,nssv1672101,nssv1675030,nssv1676350,nssv1675019,nssv1675283,nssv1672065,nssv1674352,nssv1676595,nssv1673830,nssv1673706,nssv1672635,nssv1675471,nssv1672226,nssv1673571,nssv1675165,nssv1675604,nssv1675262,nssv1673029,nssv1675110,nssv1674196,nssv1672126,nssv1674026 M 265 45 1 CROCCP2,LOC729574,MIR3675,MST1P2,NBPF1 nsv471655 1 16795828 16882680 CNV gain+loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550593,nssv550598,nssv550587,nssv550590,nssv550572,nssv550591,nssv550574,nssv550580,nssv550594,nssv550582,nssv550571,nssv550597,nssv550576,nssv550584,nssv550585,nssv550577,nssv550599,nssv550578,nssv550595,nssv550583,nssv550586,nssv550588,nssv550592,nssv550596,nssv550573,nssv550581,nssv550579,nssv550575,nssv550589 M 48 2 27 CROCCP2,LOC729574,MIR3675,MST1P2,NBPF1 JK1051A,JK1058B,JK776,NA10469,NA10494,NA10495,NA10496,NA10967,NA10969,NA10976,NA10979,NA11521,NA11523,NA15724,NA15725,NA15726,NA15728,NA15730,NA15731,NA15732,NA15733,NA17014,NA17015,NA17016,NA17020,NA17051,NA17052,NA17059,P86GA dgv66n100 1 16798723 16921054 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011696,nsv1004345,nsv1007267,nsv1004477,nsv1007303,nsv1004276 M 29084 11 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 nsv999755 1 16803904 16859426 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3462973 M 29084 1 0 CROCCP2,MST1P2,NBPF1 dgv67n100 1 16808531 16859426 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013907,nsv1013795 M 29084 7 2 CROCCP2,MST1P2,NBPF1 dgv68n100 1 16808531 16894856 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998431,nsv997494,nsv1001028 M 29084 4 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2,NBPF1 dgv69n100 1 16816188 16843031 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008125,nsv997712 M 29084 0 3 CROCCP2 dgv70n100 1 16816188 16987287 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011567,nsv1012231,nsv1002493,nsv1001392 M 29084 7 8 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2 nsv3854 1 16817728 16837158 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3870 M 9 1 0 CROCCP2 NA12878 esv29948 1 16820714 17130584 CNV loss Wheeler_et_al_2008 18421352 Oligo aCGH,Sequencing essv84187 M 3 0 1 CROCC,CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2 WATSON dgv21n67 1 16825663 16979088 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821721,nsv821732 M 31 2 0 CROCCP2,ESPNP,LOC729574,MIR3675,MST1L,MST1P2 AK14,NA18547 nsv1006849 1 16826346 16843031 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477604,nssv3463231,nssv3471099,nssv3475522 M 29084 2 2 CROCCP2 nsv1003602 1 16826346 16859426 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470239,nssv3464884 M 29084 0 2 CROCCP2,MST1P2 dgv71n100 1 16826346 16885360 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013865,nsv1009664 M 29084 0 2 CROCCP2,LOC729574,MIR3675,MST1P2 dgv72n100 1 16826346 16921054 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999674,nsv1003822,nsv1015120,nsv1002033 M 29084 13 5 CROCCP2,ESPNP,LOC729574,MIR3675,MST1P2 nsv1004433 1 16835888 16859426 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471766,nssv3470088,nssv3465301,nssv3698901,nssv3698902,nssv3466938,nssv3478593,nssv3469087 M 29084 2 6 MST1P2 dgv73n100 1 16835888 16885360 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002286,nsv1013392 M 29084 2 0 LOC729574,MIR3675,MST1P2 dgv74n100 1 16835888 16987287 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007699,nsv997837,nsv1006084,nsv1014092,nsv1001042 M 29084 6 0 ESPNP,LOC729574,MIR3675,MST1L,MST1P2 dgv75n100 1 16835888 17063437 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000053,nsv1008141 M 29084 3 0 ESPNP,LOC729574,MIR3675,MST1L,MST1P2 dgv76n100 1 16838236 16921054 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004954,nsv1006044,nsv1009805,nsv1010979 M 29084 8 0 ESPNP,LOC729574,MIR3675,MST1P2 dgv77n100 1 16840700 16987002 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003231,nsv1010902,nsv1005862 M 29084 0 3 ESPNP,LOC729574,MIR3675,MST1L,MST1P2 nsv436652 1 16847039 16955830 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465873 M 2 0 0 ESPNP,LOC729574,MIR3675,MST1L,MST1P2 NA18505 nsv945794 1 16851115 16855159 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756587,nssv1756615,nssv1756576,nssv1756616,nssv1756644,nssv1756630,nssv1756649,nssv1756570,nssv1756599,nssv1756602,nssv1756578,nssv1756611,nssv1756588,nssv1756619,nssv1756592,nssv1756627,nssv1756601,nssv1756614,nssv1756580,nssv1756593,nssv1756571,nssv1756596,nssv1756647,nssv1756625,nssv1756583,nssv1756634,nssv1756645,nssv1756605,nssv1756579,nssv1756628,nssv1756598,nssv1756620,nssv1756582,nssv1756607,nssv1756573,nssv1756617,nssv1756591,nssv1756637,nssv1756640,nssv1756603,nssv1756574,nssv1756632,nssv1756581,nssv1756618,nssv1756641,nssv1756636,nssv1756572,nssv1756606,nssv1756584,nssv1756631,nssv1756585,nssv1756622,nssv1756577,nssv1756639,nssv1756589,nssv1756638,nssv1756648,nssv1756633,nssv1756590,nssv1756604,nssv1756643,nssv1756621,nssv1756575,nssv1756623,nssv1756594,nssv1756612,nssv1756642,nssv1756609,nssv1756586,nssv1756608,nssv1756646,nssv1756624,nssv1756597,nssv1756600,nssv1756595,nssv1756635,nssv1756629,nssv1756626,nssv1756610,nssv1756613 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3385518 1 16851652 16861450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692036 M 185 1 0 "" NA19240 nsv945795 1 16855159 16882615 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753745,nssv1756710,nssv1756660,nssv1753732,nssv1753748,nssv1756703,nssv1753747,nssv1756688,nssv1753738,nssv1756683,nssv1756672,nssv1753750,nssv1756658,nssv1753726,nssv1753746,nssv1756690,nssv1756668,nssv1753749,nssv1756651,nssv1756692,nssv1756661,nssv1756699,nssv1753744,nssv1753758,nssv1756681,nssv1753735,nssv1756663,nssv1756695,nssv1756654,nssv1753756,nssv1753742,nssv1756676,nssv1756678,nssv1756715,nssv1756662,nssv1756701,nssv1756671,nssv1753759,nssv1753740,nssv1756682,nssv1756664,nssv1756705,nssv1756669,nssv1756694,nssv1756652,nssv1756691,nssv1756659,nssv1756708,nssv1756657,nssv1756673,nssv1756674,nssv1753755,nssv1753739,nssv1756707,nssv1756653,nssv1756704,nssv1756655,nssv1753753,nssv1753743,nssv1753734,nssv1756665,nssv1756714,nssv1756667,nssv1756706,nssv1756670,nssv1756693,nssv1756656,nssv1753729,nssv1756666,nssv1753736,nssv1756679,nssv1756697,nssv1756696,nssv1756685,nssv1756700,nssv1756680,nssv1756650,nssv1756712,nssv1753751,nssv1753727,nssv1756687,nssv1756713,nssv1756684,nssv1756709,nssv1756702,nssv1753733,nssv1753731,nssv1756698,nssv1753757,nssv1756675,nssv1756677,nssv1753737,nssv1756689,nssv1756686,nssv1756711,nssv1753728,nssv1753754 M 97 10 0 LOC729574,MIR3675 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1010635 1 16859426 17050540 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470355 M 29084 0 1 ESPNP,LOC729574,MIR3675,MST1L dgv78n100 1 16859426 17148816 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007124,nsv999821,nsv1013086,nsv1006624,nsv1011033,nsv1014131,nsv1008540,nsv1004456,nsv1009507,nsv998520,nsv998952,nsv1011953,nsv997940,nsv998415,nsv997587,nsv1007496,nsv999429,nsv1005714,nsv998576,nsv1006962,nsv1003651,nsv1013047,nsv1009239,nsv1005992,nsv999659,nsv1013663,nsv1001113,nsv1005263,nsv1010564,nsv1007084,nsv1005723 M 29084 0 37 CROCC,ESPNP,LOC729574,MIR3675,MST1L dgv51e59 1 16861952 16875450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3391515,esv3415606 M 185 2 0 LOC729574 NA19239,NA19240 nsv945573 1 16872574 16875793 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570223,nssv2570271,nssv2570213,nssv2570230,nssv2570281,nssv2570256,nssv2570279,nssv2570247,nssv2570210,nssv2570260,nssv2570277,nssv2570238,nssv2570202,nssv2570241,nssv2570217,nssv2570259,nssv2570207,nssv2570229,nssv2570218,nssv2570272,nssv2570205,nssv2570270,nssv2570227,nssv2570232,nssv2570212,nssv2570248,nssv2570204,nssv2570243,nssv2570197,nssv2570237,nssv2570200,nssv2570233,nssv2570276,nssv2570254,nssv2571157,nssv2570251,nssv2570216,nssv2570222,nssv2570219,nssv2570261,nssv2570208,nssv2570246,nssv2570211,nssv2570266,nssv2570199,nssv2570249,nssv2570203,nssv2570258,nssv2570280,nssv2570262,nssv2570278,nssv2570265,nssv2570273,nssv2570245,nssv2570221,nssv2570252,nssv2570201,nssv2570244,nssv2570215,nssv2570196,nssv2570274,nssv2570236,nssv2570206,nssv2570235,nssv2570228,nssv2570226,nssv2570214,nssv2570257,nssv2571156,nssv2570268,nssv2570269,nssv2570263,nssv2570255,nssv2570224,nssv2570239,nssv2570225,nssv2570240,nssv2570250,nssv2570234,nssv2570267 M 97 10 0 LOC729574 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv160333 1 16873514 16873824 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178911 M 24 "" nsv1005904 1 16878309 16894856 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481884 M 29084 1 0 ESPNP,MIR3675 dgv79n100 1 16878309 16918336 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998430,nsv1012785,nsv1000863,nsv1012474,nsv1001470 M 29084 7 0 ESPNP,MIR3675 dgv80n100 1 16878309 16921054 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010617,nsv1000264,nsv1002159,nsv1000215,nsv1002906,nsv1009729,nsv1012493 M 29084 0 11 ESPNP,MIR3675 dgv81n100 1 16878309 16921054 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000798,nsv1004024,nsv1010853,nsv1005534,nsv1010324,nsv1012120,nsv1012136,nsv1001394,nsv1012643 M 29084 108 74 ESPNP,MIR3675 dgv82n100 1 16878309 16987287 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998337,nsv1012901,nsv1009237,nsv997533,nsv1010255,nsv1006800,nsv1011015,nsv1011193,nsv1006268,nsv1007149,nsv1014668,nsv1001537,nsv1001071,nsv999715,nsv1011952 M 29084 54 116 ESPNP,LOC729574,MIR3675,MST1L dgv83n100 1 16878309 16987287 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002283,nsv1011126,nsv1004466,nsv1011440,nsv1002351,nsv1000749,nsv1011895,nsv997906,nsv1003320,nsv999817,nsv997472,nsv1010185,nsv1003921,nsv1013519,nsv1001021,nsv1005736,nsv1000446 M 29084 0 27 ESPNP,LOC729574,MIR3675,MST1L dgv84n100 1 16878309 17063437 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008697,nsv999122,nsv1013147,nsv998297,nsv1013871,nsv1003639,nsv1015070 M 29084 14 0 ESPNP,LOC729574,MIR3675,MST1L dgv85n100 1 16878309 17101281 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998033,nsv1011317,nsv997873,nsv1015029,nsv997590,nsv998000,nsv1007755,nsv1009673,nsv1006639,nsv1012272 M 29084 11 0 ESPNP,LOC729574,MIR3675,MST1L dgv86n100 1 16878309 17155662 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012661,nsv1014920,nsv1011194,nsv1009506,nsv1015101,nsv1014328,nsv1004677,nsv997485,nsv999163,nsv1000042,nsv1009568,nsv998741,nsv999997,nsv1008705,nsv1009482,nsv999527,nsv999387,nsv1013479,nsv1002740,nsv1011507,nsv1010964,nsv1013740,nsv997761,nsv997557,nsv1009441,nsv1011710,nsv997327,nsv999570,nsv999758,nsv998046,nsv999369,nsv1010977,nsv1007131,nsv1005933,nsv1000831,nsv1011447 M 29084 62 0 CROCC,ESPNP,LOC729574,MIR3675,MST1L dgv87n100 1 16878553 16973452 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000221,nsv1001965,nsv1002559,nsv1001556,nsv1007901,nsv1006166,nsv1000936,nsv998273,nsv1000417,nsv1010159,nsv1004982,nsv1014803,nsv1003140,nsv1002334 M 29084 0 22 ESPNP,LOC729574,MIR3675,MST1L esv6890 1 16878776 16925145 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29331 M 1 0 0 ESPNP,MIR3675 dgv158n54 1 16880491 16884828 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545646,nsv545644 M 17421 2 0 "" dgv159n54 1 16880491 16905404 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545662,nsv545648,nsv545645 M 17421 3 0 ESPNP nsv545647 1 16881046 16884027 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710847 M 17421 0 1 "" dgv2n6 1 16882144 16885348 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159492,nsv159352 M 24 "" dgv160n54 1 16882191 16884242 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545650,nsv545649 M 17421 0 3 "" dgv161n54 1 16882191 16884828 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545657,nsv545651 M 17421 8 0 "" dgv162n54 1 16882191 16885224 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545658,nsv545660,nsv545652 M 17421 0 4 "" nsv545653 1 16882191 16885282 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710861,nssv710860,nssv710859,nssv710862 M 17421 2 2 "" nsv545654 1 16882191 16905401 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710863 M 17421 0 1 ESPNP dgv163n54 1 16882781 16884523 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545655,nsv545656 M 17421 3 4 "" nsv545659 1 16882937 16884242 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710874 M 17421 0 1 "" nsv545661 1 16883150 16884828 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710878,nssv710877 M 17421 1 1 "" nsv1014742 1 16884025 16902820 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463641,nssv3475540,nssv3698924 M 29084 3 0 ESPNP dgv88n100 1 16884025 16907795 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003570,nsv1013125 M 29084 0 2 ESPNP dgv89n100 1 16884025 16966641 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008943,nsv1002602,nsv1010301,nsv997279 M 29084 17 10 ESPNP,LOC729574,MST1L dgv90n100 1 16884025 16984134 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013618,nsv1007643,nsv1002553 M 29084 5 0 ESPNP,LOC729574,MST1L dgv91n100 1 16884025 17148816 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014413,nsv1010741,nsv1001160,nsv1002170,nsv1009637,nsv1005834,nsv1011409,nsv1004244,nsv1007278,nsv1008657,nsv1013593,nsv1010885,nsv999959,nsv1015124,nsv1007514,nsv1012011,nsv1002043,nsv1006669,nsv1008211,nsv998199,nsv1000925,nsv1001591,nsv1002162,nsv1008334,nsv1011647,nsv999721 M 29084 163 38 CROCC,ESPNP,LOC729574,MIR3675,MST1L dgv92n100 1 16884025 17202724 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008435,nsv1001726,nsv1003274 M 29084 3 0 ATP13A2,CROCC,ESPNP,LOC729574,MFAP2,MIR3675,MST1L nsv438303 1 16884242 16896887 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469074,nssv468963,nssv468740,nssv468852 M 269 0 4 ESPNP NA12802,NA12815,NA19138,NA19139 esv33965 1 16884707 17152562 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93286,essv101691,essv100280,essv96937,essv93832,essv95397,essv94591,essv97457,essv95797,essv92701,essv97929,essv95690,essv101508,essv94416,essv101115,essv97172,essv96287,essv99198,essv100427,essv93568,essv100508,essv93586,essv95548,essv101652,essv101061,essv92596,essv99013,essv97317,essv95885,essv96578,essv97738,essv93056,essv98164,essv94631,essv98340,essv94915,essv95128,essv96504,essv97342 M 51 31 7 CROCC,ESPNP,LOC729574,MIR3675,MST1L 21603,21616,21618,21634,21693,21721,21772,21808,21817,21837,21841,21847,21863,21872,21879,21909,21911,21932,21938,21944,22011,22075,22128,22170,22231,22233,22261,22275,22278,22286,22298,22300,22371 dgv93n100 1 16884765 16966641 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006664,nsv1013619,nsv1008172,nsv1001620 M 29084 6 0 ESPNP,LOC729574,MST1L esv2547944 1 16885327 16923389 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5366950 M 1 1 0 ESPNP NA18507 nsv945796 1 16885356 16887367 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754466,nssv1754420,nssv1753761,nssv1754476,nssv1753782,nssv1754441,nssv1754471,nssv1754416,nssv1754463,nssv1754431,nssv1753779,nssv1754448,nssv1753783,nssv1753790,nssv1753776,nssv1754433,nssv1754469,nssv1754449,nssv1753773,nssv1753799,nssv1754461,nssv1754422,nssv1753767,nssv1753797,nssv1754470,nssv1754480,nssv1753784,nssv1754477,nssv1753777,nssv1754443,nssv1753780,nssv1753795,nssv1753766,nssv1754435,nssv1753792,nssv1753789,nssv1753781,nssv1754437,nssv1754464,nssv1754459,nssv1753775,nssv1754418,nssv1753791,nssv1754424,nssv1754468,nssv1754439,nssv1753771,nssv1754446,nssv1753772,nssv1753760,nssv1753768,nssv1754421,nssv1753762,nssv1754451,nssv1754462,nssv1754428,nssv1753770,nssv1754472,nssv1753778,nssv1754453,nssv1753794,nssv1754438,nssv1753787,nssv1754452,nssv1753765,nssv1753793,nssv1753764,nssv1754417,nssv1753769,nssv1754474,nssv1754465,nssv1754419,nssv1753786,nssv1754475,nssv1754440,nssv1754425,nssv1754482,nssv1754450,nssv1754454,nssv1754430,nssv1754479,nssv1754473,nssv1754481,nssv1753798,nssv1754432,nssv1754458,nssv1753788,nssv1754429,nssv1754427,nssv1754457,nssv1754455,nssv1754444,nssv1754436,nssv1754426,nssv1754442,nssv1754447,nssv1754460 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821743 1 16886175 16979088 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437930 M 31 1 0 ESPNP,LOC729574,MST1L NA18951 nsv437204 1 16887281 16896887 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467085 M 60 0 1 ESPNP NA18506 nsv821754 1 16887848 16905451 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426377 M 31 1 0 ESPNP AK6 nsv821765 1 16887848 16926498 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440804 M 31 1 0 ESPNP NA18969 dgv94n100 1 16889653 17063437 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013007,nsv1009678,nsv1010565,nsv1010728,nsv1000649,nsv1001202,nsv1013266 M 29084 0 12 ESPNP,LOC729574,MIR3675,MST1L nsv819277 1 16891008 16926528 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418721 M 2 1 0 ESPNP AK1 nsv437205 1 16891707 16908818 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467086 M 60 0 1 ESPNP NA19139 esv3334984 1 16892652 16898350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692039 M 185 1 0 ESPNP NA19240 nsv437206 1 16896887 16955848 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467087 M 60 0 1 ESPNP,LOC729574,MST1L NA18863 dgv52e59 1 16902052 16998250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3377509,esv3418061,esv3347982,esv3350404 M 185 4 0 ESPNP,LOC729574,MST1L NA12878,NA12891,NA12892,NA19238 esv3419956 1 16902152 16913750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692043 M 185 1 0 ESPNP NA12892 dgv95n100 1 16902167 17090482 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011776,nsv998074,nsv998772,nsv999786 M 29084 4 6 ESPNP,LOC729574,MIR3675,MST1L esv3892414 1 16905401 17140083 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788485,essv25791923 M 3017 2 0 CROCC,ESPNP,LOC729574,MIR3675,MST1L nsv545663 1 16905404 16919026 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710880,nssv710882,nssv710881 M 17421 0 3 ESPNP dgv164n54 1 16905404 16975997 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545668,nsv545664 M 17421 0 2 ESPNP,LOC729574,MST1L esv3372391 1 16907352 16964650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692045 M 185 1 0 ESPNP,LOC729574,MST1L NA19240 nsv511141 1 16907780 16919043 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625265 M 1 0 1 ESPNP 1 dgv165n54 1 16908187 16926496 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545665,nsv545666 M 17421 0 2 ESPNP nsv1009050 1 16908789 16984134 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482504 M 29084 0 1 ESPNP,LOC729574,MST1L nsv1013011 1 16909261 16987287 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475430 M 29084 1 0 ESPNP,LOC729574,MST1L nsv545667 1 16917098 16961637 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710886 M 17421 0 1 ESPNP,LOC729574,MST1L nsv1004978 1 16918033 16987287 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700035,nssv3700034,nssv3700033,nssv3480064,nssv3469518,nssv3482626,nssv3463375,nssv3474240,nssv3474852,nssv3470604 M 29084 3 7 ESPNP,LOC729574,MST1L nsv945797 1 16920746 16950113 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754505,nssv1754513,nssv1754514,nssv1754563,nssv1754507,nssv1754519,nssv1754493,nssv1754586,nssv1754575,nssv1754534,nssv1754573,nssv1754564,nssv1754499,nssv1754537,nssv1754484,nssv1754530,nssv1754569,nssv1754548,nssv1754497,nssv1754556,nssv1754486,nssv1754524,nssv1754570,nssv1754551,nssv1754485,nssv1754562,nssv1754578,nssv1754567,nssv1754494,nssv1754554,nssv1754506,nssv1754539,nssv1754502,nssv1754581,nssv1754504,nssv1754584,nssv1754490,nssv1754532,nssv1754498,nssv1754553,nssv1754492,nssv1754521,nssv1754501,nssv1754510,nssv1754509,nssv1754542,nssv1754574,nssv1754550,nssv1754572,nssv1754538,nssv1754495,nssv1754583,nssv1754571,nssv1754526,nssv1754488,nssv1754529,nssv1754568,nssv1754552,nssv1754517,nssv1754540,nssv1754503,nssv1754558,nssv1754496,nssv1754582,nssv1754576,nssv1754512,nssv1754515,nssv1754525,nssv1754491,nssv1754549,nssv1754487,nssv1754565,nssv1754518,nssv1754543,nssv1754541,nssv1754483,nssv1754545,nssv1754536,nssv1754520,nssv1754523,nssv1754560,nssv1754528,nssv1754589,nssv1754559,nssv1754546,nssv1754557,nssv1754527,nssv1754535,nssv1754561,nssv1754585,nssv1754508,nssv1754579,nssv1754547,nssv1754580,nssv1754531,nssv1754516,nssv1754587 M 97 10 0 LOC729574 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv96n100 1 16920771 17120461 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999455,nsv1005541,nsv1014855,nsv1008111,nsv1003801 M 29084 0 5 LOC729574,MIR3675,MST1L esv2440890 1 16923389 16926768 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5191715 M 1 1 0 "" NA18507 dgv22n67 1 16923424 16979241 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821787,nsv821810,nsv821776,nsv821798 M 31 4 0 LOC729574,MST1L AK16,AK18,AK2,AK4 nsv3965 1 16925098 16957629 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3893,nssv5340 M 9 2 0 LOC729574,MST1L NA12878,NA19129 esv3423215 1 16931052 16943650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692048 M 185 1 0 LOC729574 NA19239 nsv436227 1 16934681 17059410 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465895 M 2 0 1 MIR3675,MST1L NA18505 nsv436024 1 16935707 17060890 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465906 M 2 1 0 MIR3675,MST1L NA15510 nsv498664 1 16944010 16945799 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585404 M 9 0 1 "" esv3430695 1 16944752 16958350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692049 M 185 1 0 MST1L NA19239 nsv945798 1 16950113 16954997 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754606,nssv1754641,nssv1754672,nssv1754628,nssv1754673,nssv1754615,nssv1754612,nssv1754656,nssv1754601,nssv1754638,nssv1754591,nssv1754627,nssv1754616,nssv1754637,nssv1754674,nssv1754666,nssv1754668,nssv1754647,nssv1754602,nssv1754623,nssv1754613,nssv1754655,nssv1754597,nssv1754646,nssv1754622,nssv1754619,nssv1754608,nssv1754644,nssv1754592,nssv1754626,nssv1754604,nssv1754640,nssv1754593,nssv1754635,nssv1754611,nssv1754658,nssv1754598,nssv1754618,nssv1754605,nssv1754662,nssv1754620,nssv1754639,nssv1754595,nssv1754652,nssv1754670,nssv1754630,nssv1754675,nssv1754660,nssv1754609,nssv1754659,nssv1754614,nssv1754661,nssv1754596,nssv1754645,nssv1754607,nssv1754650,nssv1754600,nssv1754664,nssv1754669,nssv1754657,nssv1754603,nssv1754633,nssv1754671,nssv1754636,nssv1754624,nssv1754651,nssv1754667,nssv1754649,nssv1754594,nssv1754617,nssv1754677,nssv1754648,nssv1754653,nssv1754631,nssv1754629,nssv1754642,nssv1754634,nssv1754625,nssv1754663,nssv1754590 M 97 10 0 MST1L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945799 1 16954997 16998477 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754688,nssv1754683,nssv1754680,nssv1754678,nssv1754684,nssv1754679,nssv1754685,nssv1754689,nssv1754686,nssv1754682,nssv1754681 M 97 10 0 MST1L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv97n100 1 16955166 17087397 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004882,nsv1005831 M 29084 2 0 MIR3675,MST1L dgv98n100 1 16955166 17090482 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008126,nsv1004332 M 29084 4 4 MIR3675,MST1L dgv99n100 1 16955166 17133193 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007409,nsv1000802,nsv1007639,nsv1002935,nsv1014999,nsv1004797,nsv1010567,nsv999921,nsv1013823,nsv997752,nsv999210,nsv1013930,nsv1012802,nsv1000077,nsv1000045,nsv997860,nsv1000155,nsv1014038,nsv1009739,nsv999593,nsv999357,nsv1008985,nsv1005147,nsv1008933,nsv1001925 M 29084 0 32 CROCC,MIR3675,MST1L dgv100n100 1 16955166 17134822 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010566,nsv1004484,nsv1004399,nsv1014720,nsv998287,nsv1010272,nsv1009109,nsv1007468,nsv1009667,nsv1012353,nsv1012187,nsv1005842,nsv1009553,nsv1005610 M 29084 49 30 CROCC,MIR3675,MST1L dgv101n100 1 16955166 17158894 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997704,nsv997522,nsv1010245,nsv1008997,nsv1014863,nsv997588,nsv1013757,nsv1010868,nsv1012064,nsv1006989,nsv1001823,nsv999848,nsv1005424,nsv1004987 M 29084 23 0 CROCC,MIR3675,MST1L esv3414600 1 16958852 16960850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692050 M 185 1 0 MST1L NA19239 nsv1011815 1 16961924 17148816 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471830 M 29084 0 1 CROCC,MIR3675,MST1L dgv102n100 1 16965832 17134822 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008238,nsv1005801,nsv1002748,nsv999158,nsv1009095,nsv1014401,nsv1012410,nsv1000621 M 29084 18 0 CROCC,MIR3675 esv3424787 1 16968552 16977950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692051 M 185 1 0 "" NA19240 esv3397521 1 16978752 16980850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692052 M 185 1 0 "" NA19240 dgv103n100 1 16983871 17112042 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999083,nsv1006978 M 29084 0 2 MIR3675 esv3408780 1 16989652 16991550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692054 M 185 1 0 "" NA19238 esv3348545 1 16992752 16997950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692055 M 185 1 0 "" NA19238 nsv945800 1 17047977 17154591 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754694,nssv1755798,nssv1754701,nssv1755856,nssv1755835,nssv1755833,nssv1754691,nssv1755790,nssv1754712,nssv1754690,nssv1754692,nssv1755817,nssv1754700,nssv1755820,nssv1754714,nssv1755802,nssv1754704,nssv1755796,nssv1754699,nssv1755812,nssv1754713,nssv1755854,nssv1754693,nssv1755794,nssv1755841,nssv1755813,nssv1754708,nssv1754715,nssv1754706,nssv1755807,nssv1755843,nssv1755795,nssv1754697,nssv1755799,nssv1754722,nssv1755849,nssv1755838,nssv1755805,nssv1754705,nssv1755788,nssv1755837,nssv1755851,nssv1755839,nssv1755786,nssv1754716,nssv1755818,nssv1754711,nssv1755822,nssv1754703,nssv1755804,nssv1754702,nssv1755819,nssv1754695,nssv1754723,nssv1754696,nssv1755821,nssv1755840,nssv1755787,nssv1755845,nssv1754719,nssv1755785,nssv1755815,nssv1755844,nssv1755810,nssv1754721,nssv1755791,nssv1755842,nssv1755824,nssv1754710,nssv1755846,nssv1754707,nssv1755793,nssv1755800,nssv1755809,nssv1754718,nssv1755829,nssv1755797,nssv1755806,nssv1755789,nssv1755826,nssv1755827,nssv1754717,nssv1755830,nssv1755808,nssv1755853,nssv1755831,nssv1755832,nssv1755823,nssv1755811,nssv1755852,nssv1755848,nssv1755855,nssv1755816,nssv1755834,nssv1755801,nssv1755850,nssv1755828 M 97 10 0 CROCC,MIR3675 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26111 1 17048309 17154340 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11182,esv11657,esv20155,esv15416,esv15181,esv20295,esv18904,esv16106 M 40 16 11 CROCC,MIR3675 NA07037,NA07045,NA11894,NA11993,NA12156,NA12414,NA12878,NA15510,NA18502,NA18505,NA18511,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19257 nsv821037 1 17048309 17154340 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420258 M 1 1 0 CROCC,MIR3675 NA10851 esv3422357 1 17048452 17053150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692056 M 185 1 0 "" NA12891 dgv53e59 1 17048452 17055050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3367003,esv3328740,esv3353084,esv3366548,esv3333777 M 185 5 0 "" NA12878,NA12892,NA19238,NA19239,NA19240 nsv545669 1 17049451 17067767 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710888 M 17421 0 1 MIR3675 nsv1014044 1 17049620 17108845 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478018 M 29084 1 0 MIR3675 dgv104n100 1 17049620 17133838 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013495,nsv1010819,nsv1014805,nsv998760,nsv1006089,nsv1012582,nsv1012431,nsv997607,nsv1011464,nsv1001652,nsv1003243,nsv1006496,nsv1013384,nsv1006260,nsv1012137,nsv1007033,nsv1005785,nsv1005329,nsv1002830,nsv998988,nsv1011896,nsv1012591 M 29084 0 32 CROCC,MIR3675 dgv105n100 1 17049620 17134822 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000195,nsv1005985,nsv1014409,nsv1013701,nsv1012503,nsv1004202,nsv1002929,nsv1010291,nsv1008693,nsv1001788,nsv1014380,nsv1003050,nsv1006120,nsv1006056,nsv1008038,nsv1007098 M 29084 298 82 CROCC,MIR3675 dgv106n100 1 17049620 17134822 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007186,nsv1013559,nsv1002084,nsv1008080,nsv999892,nsv1005399,nsv1012933,nsv1012349,nsv1009803,nsv1005672,nsv1014435,nsv1003238,nsv1006917 M 29084 19 0 CROCC,MIR3675 nsv1006828 1 17049620 17148816 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474179,nssv3464892,nssv3477926,nssv3471291,nssv3464446,nssv3465003,nssv3480631,nssv3467228,nssv3470456,nssv3700135,nssv3700138,nssv3462769,nssv3700137,nssv3700136,nssv3474178,nssv3479165,nssv3463758,nssv3467984,nssv3464272,nssv3471245,nssv3476691,nssv3477410,nssv3482066,nssv3477465 M 29084 23 1 CROCC,MIR3675 dgv107n100 1 17049620 17176419 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002758,nsv1006648,nsv999751,nsv1005053,nsv1013621 M 29084 14 0 CROCC,MFAP2,MIR3675 dgv108n100 1 17049620 17209452 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999404,nsv1001977 M 29084 2 0 ATP13A2,CROCC,MFAP2,MIR3675 nsv834258 1 17049946 17153536 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443407,nssv1443418,nssv1443395 M 95 0 3 CROCC,MIR3675 nsv834269 1 17054365 17237613 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443540,nssv1443640,nssv1443584,nssv1443473,nssv1443506,nssv1443629,nssv1443484,nssv1443462,nssv1443595,nssv1443518,nssv1443551,nssv1443651,nssv1443451,nssv1443573,nssv1443440,nssv1443529,nssv1443606,nssv1443495,nssv1443429,nssv1443617,nssv1443662,nssv1443562 M 95 0 22 ATP13A2,CROCC,MFAP2,MIR3675,SDHB dgv109n100 1 17055012 17120973 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998234,nsv1003512,nsv1014579,nsv1011863 M 29084 9 12 MIR3675 dgv166n54 1 17055702 17155012 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545670,nsv545671 M 17421 3 5 CROCC,MIR3675 esv3892303 1 17055702 17155012 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25785742,essv25800967,essv25791145,essv25786037,essv25798913,essv25784995,essv25786129 M 3017 1 6 CROCC,MIR3675 nsv545672 1 17055702 17172570 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710897 M 17421 0 1 CROCC,MIR3675 dgv54e59 1 17055752 17148950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3406942,esv3380286 M 185 2 0 CROCC,MIR3675 NA19239,NA19240 esv3354837 1 17059052 17061550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692063 M 185 1 0 "" NA19238 dgv110n100 1 17063437 17120461 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013536,nsv1014375,nsv1010407,nsv1010206,nsv1009221,nsv1014452 M 29084 0 8 "" dgv111n100 1 17063437 17167787 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000622,nsv1006180,nsv1014411,nsv998363,nsv1005199,nsv1008482 M 29084 25 0 CROCC esv990069 1 17063449 17134834 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586006 M 3 0 1 CROCC HuRef dgv55e59 1 17067252 17078250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3329394,esv3326251 M 185 2 0 "" NA12878,NA19238 esv3584587 1 17067742 17134834 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838720,essv9838719 M 34 2 0 CROCC KSM006,KSM008 nsv442727 1 17067742 17134834 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1617470,nssv1617430,nssv1617561,nssv1617623,nssv1617457,nssv1617489,nssv1617496,nssv1617523,nssv1617492,nssv1617512,nssv1617539,nssv1617521,nssv1617473,nssv1617424,nssv1617437,nssv1617443,nssv1617500,nssv1617515,nssv1617566,nssv1617550,nssv1617573,nssv1617587,nssv1617422,nssv1617461,nssv1617459,nssv1617546,nssv1617589,nssv1617552,nssv1617434,nssv1617560,nssv1617545,nssv1617621,nssv1617551,nssv1617421,nssv1617475,nssv1617431,nssv1617578,nssv1617488,nssv1617471,nssv1617582,nssv1617542,nssv1617499,nssv1617456,nssv1617575,nssv1617553,nssv1617624,nssv1617584,nssv1617508,nssv1617609,nssv1617554,nssv1617618,nssv1617596,nssv1617513,nssv1617468,nssv1617518,nssv1617616,nssv1617598,nssv1617572,nssv1617463,nssv1617590,nssv1617497,nssv1617617,nssv1617632,nssv1617509,nssv1617586,nssv1617563,nssv1617406,nssv1617486,nssv1617530,nssv1617556,nssv1617629,nssv1617619,nssv1617426,nssv1617464,nssv1617631,nssv1617540,nssv1617524,nssv1617581,nssv1617594,nssv1617527,nssv1617520,nssv1617577,nssv1617494,nssv1617487,nssv1617453,nssv1617585,nssv1617438,nssv1617522,nssv1617565,nssv1617606,nssv1617574,nssv1617452,nssv1617419,nssv1617627,nssv1617416,nssv1617441,nssv1617445,nssv1617510,nssv1617466,nssv1617626,nssv1617418,nssv1617451,nssv1617511,nssv1617440,nssv1617490,nssv1617504,nssv1617541,nssv1617428,nssv1617432,nssv1617413,nssv1617528,nssv1617417,nssv1617534,nssv1617454,nssv1617405,nssv1617467,nssv1617562,nssv1617477,nssv1617571,nssv1617567,nssv1617423,nssv1617593,nssv1617607,nssv1617481,nssv1617415,nssv1617570,nssv1617517,nssv1617465,nssv1617410,nssv1617597,nssv1617519,nssv1617564,nssv1617409,nssv1617604,nssv1617449,nssv1617548,nssv1617600,nssv1617444,nssv1617498,nssv1617462,nssv1617599,nssv1617476,nssv1617439,nssv1617483,nssv1617448,nssv1617605,nssv1617538,nssv1617484,nssv1617628,nssv1617474,nssv1617544,nssv1617601,nssv1617529,nssv1617442,nssv1617612,nssv1617433,nssv1617535,nssv1617555,nssv1617455,nssv1617526,nssv1617435,nssv1617411,nssv1617495,nssv1617603,nssv1617559,nssv1617493,nssv1617427,nssv1617446,nssv1617588,nssv1617592,nssv1617450,nssv1617537,nssv1617412,nssv1617420,nssv1617501,nssv1617516,nssv1617507,nssv1617472,nssv1617615,nssv1617622,nssv1617479,nssv1617610,nssv1617482,nssv1617533,nssv1617549,nssv1617611,nssv1617402,nssv1617505,nssv1617557,nssv1617532,nssv1617478,nssv1617543,nssv1617630,nssv1617506,nssv1617404,nssv1617583,nssv1617429,nssv1617595,nssv1617608,nssv1617568,nssv1617620,nssv1617579,nssv1617576,nssv1617531,nssv1617408,nssv1617485,nssv1617407,nssv1617460 M 270 208 0 CROCC NA06985,NA06991,NA07022,NA07029,NA07034,NA07048,NA07345,NA10835,NA10838,NA10846,NA10847,NA10851,NA10854,NA10855,NA10857,NA10860,NA10861,NA10863,NA11831,NA11832,NA11840,NA11992,NA11994,NA12003,NA12004,NA12005,NA12006,NA12044,NA12056,NA12057,NA12144,NA12154,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12717,NA12740,NA12751,NA12752,NA12753,NA12760,NA12762,NA12812,NA12813,NA12814,NA12864,NA12865,NA12872,NA12873,NA12874,NA12875,NA18500,NA18501,NA18502,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18515,NA18516,NA18517,NA18521,NA18522,NA18524,NA18526,NA18529,NA18532,NA18537,NA18540,NA18542,NA18545,NA18550,NA18555,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18594,NA18603,NA18605,NA18612,NA18620,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18862,NA18870,NA18871,NA18872,NA18912,NA18913,NA18914,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18997,NA18998,NA18999,NA19000,NA19005,NA19007,NA19012,NA19093,NA19094,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19119,NA19120,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19172,NA19192,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19208,NA19209,NA19211,NA19221,NA19222,NA19223,NA19239,NA19240 nsv1008351 1 17076072 17108845 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465556,nssv3480147,nssv3469546,nssv3477663,nssv3482661,nssv3468385 M 29084 1 5 "" dgv112n100 1 17076072 17120973 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011411,nsv1011785,nsv1012168,nsv1006571,nsv1006653,nsv1004806,nsv1004370,nsv1006185,nsv1005092,nsv1014469 M 29084 0 14 "" dgv113n100 1 17076072 17133838 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000445,nsv1006577,nsv1009920,nsv1003988 M 29084 6 0 CROCC dgv114n100 1 17076072 17134822 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997581,nsv1010879,nsv1009055,nsv1003420,nsv1007034,nsv1012863,nsv1004714,nsv1013140 M 29084 88 88 CROCC dgv115n100 1 17076072 17134822 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002717,nsv1010636,nsv1002908,nsv999431,nsv1013913,nsv1005607,nsv1011835,nsv1011009,nsv1013372,nsv1001034,nsv1006216,nsv999057,nsv1002932,nsv1001379,nsv1008910,nsv999493 M 29084 0 39 CROCC dgv116n100 1 17076072 17148816 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012812,nsv998222,nsv999974 M 29084 32 6 CROCC dgv23n67 1 17080164 17145194 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821821,nsv821832 M 31 2 0 CROCC NA18547,NA18592 nsv433184 1 17081038 17135964 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463065 M 9 0 1 CROCC NA12156 esv29988 1 17081919 17124754 CNV loss Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv84227 M 2 0 1 CROCC HuRef dgv117n100 1 17082178 17134822 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011151,nsv1014213,nsv1007304,nsv1003197,nsv1010217 M 29084 13 18 CROCC esv2421455 1 17082190 17140083 CNV duplication Altshuler_et_al_2010 20811451 SNP array essv5114338,essv5089028,essv5114781,essv5119277,essv5042829,essv5058264,essv5030908,essv5012630,essv5076924,essv5017332,essv5081290,essv5141602,essv5117997,essv5105808,essv5123196,essv5081176,essv5018174,essv5046246,essv5020555,essv5139651,essv5081157,essv5012897,essv5054086,essv5106735,essv5099069,essv5129083,essv5160425,essv5034838,essv5139328,essv5144065,essv5022960,essv5042625,essv5010139,essv5127811,essv5053255,essv5128315,essv5159525,essv5071647,essv5100613,essv5045095,essv5051979,essv5048138,essv5055362,essv5105050,essv5032170,essv5105069,essv5058603,essv5023433,essv5046901,essv5057110,essv5057556,essv5063794,essv5155913,essv5016117,essv5096642,essv5134308,essv5031356,essv5088681,essv5103778,essv5129159,essv5004085,essv5152014,essv5120699,essv5130594,essv5125312,essv5020880,essv5146488,essv5095343,essv5152363,essv5048396,essv5037567,essv5037484,essv5116384,essv5098315,essv5123038,essv5103759,essv5032469,essv5103826,essv5133449,essv5047460,essv5054059,essv5117115,essv5121490,essv5138727,essv5019753,essv5033120,essv5019386,essv5031413,essv5127846,essv5060130,essv5117717,essv5153278,essv5085304,essv5098055,essv5007838,essv5049144,essv5072329,essv5103379,essv5157199,essv5110120,essv5122630,essv5157797,essv5088205,essv5017890,essv5065233,essv5041169,essv5039517,essv5007779,essv5115989,essv5017379,essv5027419,essv5052461,essv5148185,essv5045249,essv5101825,essv5015131,essv5076127,essv5117492,essv5145900,essv5014180,essv5128349,essv5156813,essv5160036,essv5094810,essv5031308,essv5014694,essv5021931,essv5064371,essv5013009,essv5124285,essv5041804,essv5148464,essv5072067,essv5016687,essv5028561,essv5048297,essv5026732,essv5008007,essv5008791,essv5115772,essv5019668,essv5049622,essv5136646,essv5089140,essv5021994,essv5047898,essv5083861,essv5071772,essv5055429,essv5134440,essv5014810,essv5123032,essv5119235,essv5042300,essv5016987,essv5101502,essv5085767,essv5126766,essv5082199,essv5063672,essv5147022,essv5152305,essv5015446,essv5018177,essv5130528,essv5124020,essv5064968,essv5142604,essv5075339,essv5024108,essv5092744,essv5112080,essv5047004,essv5125769,essv5132756,essv5017794,essv5091443,essv5105512,essv5160797,essv5024608,essv5091243,essv5088248,essv5090795,essv5135370,essv5052144,essv5083755,essv5064258,essv5148048,essv5061722,essv5082948,essv5071444,essv5060546,essv5143110,essv5040865,essv5069059,essv5146556,essv5146796,essv5004444,essv5083668,essv5069410,essv5158152,essv5084379,essv5129387,essv5081843,essv5122596,essv5030592,essv5022653,essv5024519,essv5007504,essv5059549,essv5042763,essv5030387,essv5009191,essv5032473,essv5040328,essv5094626,essv5038258,essv5147309,essv5065387,essv5041980,essv5075073,essv5035883,essv5148378,essv5113041,essv5032316,essv5117284,essv5112594,essv5140347,essv5028085,essv5008000,essv5074373,essv5140684,essv5085965,essv5032394,essv5129917,essv5018172,essv5097008,essv5002204,essv5045172,essv5101186,essv5098068,essv5058964,essv5111040,essv5127738,essv5043721,essv5044898,essv5130948,essv5009826,essv5039926,essv5107567,essv5139461,essv5149250,essv5093717,essv5106448,essv5077016,essv5016821,essv5038858,essv5050331,essv5095772,essv5051588,essv5048413,essv5056651,essv5100525,essv5115978,essv5157953,essv5157378,essv5103771,essv5119616,essv5037077,essv5007479,essv5010067,essv5026844,essv5036913,essv5139551,essv5044467,essv5005847,essv5158627,essv5044987,essv5012961,essv5003156,essv5075151,essv5095836,essv5115411,essv5131593,essv5122841,essv5079291,essv5121456,essv5110707,essv5155596,essv5085695,essv5145356,essv5060750,essv5122188,essv5089151,essv5110538,essv5064110,essv5059367,essv5084910,essv5003961,essv5046441,essv5120412,essv5070319,essv5031423,essv5090637,essv5084421,essv5026223,essv5063353,essv5096160,essv5141036,essv5019224,essv5157006,essv5047389,essv5056144,essv5141584,essv5092490,essv5029838,essv5090302,essv5133460,essv5113457,essv5113019,essv5035947,essv5133752,essv5008077,essv5114037,essv5093849,essv5041116,essv5057016,essv5040787,essv5048257,essv5124993,essv5019407,essv5119844,essv5006519,essv5136108,essv5040406,essv5039821,essv5065940,essv5159889,essv5114395,essv5043135,essv5085115,essv5051338,essv5066867,essv5106778,essv5055998,essv5119346,essv5045712,essv5051479,essv5045814,essv5066838,essv5015676,essv5022740,essv5018074,essv5027457,essv5017352,essv5103415,essv5114829,essv5109059,essv5051919,essv5050900,essv5048230,essv5151985,essv5121681,essv5082429,essv5081263,essv5160920,essv5044592,essv5011659,essv5084521,essv5077558,essv5142986,essv5130485,essv5083100,essv5113280,essv5016066,essv5052392,essv5129041,essv5037760,essv5093178,essv5096519,essv5076373,essv5123076,essv5035516,essv5072970,essv5060841,essv5054766,essv5121029,essv5045959,essv5046536,essv5108682,essv5097100,essv5090873,essv5084952,essv5046748,essv5143147,essv5154202,essv5103961,essv5059805,essv5123887,essv5080865,essv5150991,essv5099230,essv5066756,essv5102792,essv5111876,essv5102812,essv5020012,essv5078545,essv5087014,essv5002508,essv5006977,essv5087089,essv5137317,essv5099962,essv5030657,essv5021138,essv5130918,essv5076785,essv5138642,essv5156413,essv5118820,essv5004269,essv5044837,essv5107317,essv5105600,essv5117088,essv5124242,essv5084771,essv5004468,essv5065761,essv5049316,essv5056899,essv5051893,essv5134265,essv5075006,essv5021274,essv5049633,essv5092788,essv5109258,essv5094424,essv5095692,essv5027238,essv5090458,essv5086298,essv5085316,essv5042364,essv5059149,essv5016348,essv5091838,essv5057304,essv5065490,essv5056012,essv5093740,essv5133688,essv5149086,essv5006467,essv5079526,essv5158666,essv5101859,essv5074418,essv5114019,essv5088408,essv5088822,essv5150313,essv5035906,essv5116575,essv5121813,essv5092709,essv5026768,essv5065977,essv5011869,essv5124305,essv5086531,essv5146549,essv5079108,essv5130731,essv5104607,essv5136757,essv5045942,essv5149295,essv5105480,essv5102689,essv5004154,essv5006490,essv5083014,essv5152392,essv5130484,essv5136376,essv5091035,essv5106194,essv5040075,essv5016691,essv5117269,essv5061003,essv5117383,essv5099226,essv5076075,essv5142856,essv5142022,essv5080701,essv5117231,essv5133655,essv5089240,essv5075932,essv5076471,essv5135969,essv5069984,essv5065477,essv5021954,essv5015485,essv5159643,essv5087882,essv5101695,essv5156750,essv5027231,essv5047555,essv5138662,essv5062523,essv5050835,essv5026386,essv5054193,essv5086846,essv5075234,essv5064954,essv5104936,essv5007503,essv5098012,essv5030388,essv5029256,essv5056267,essv5139716,essv5130675,essv5048475,essv5004579,essv5037942,essv5098226,essv5053715,essv5047063,essv5032830,essv5039437,essv5104436,essv5110435,essv5119538,essv5110166,essv5159156,essv5095375,essv5143890,essv5062068,essv5091949,essv5101426,essv5080108,essv5111824,essv5002999,essv5118129,essv5077378,essv5135966,essv5085572,essv5155086,essv5047731,essv5053053,essv5117452,essv5074168,essv5009278,essv5121078,essv5081270,essv5150465,essv5120827,essv5020252,essv5073684,essv5109355,essv5128068,essv5104802,essv5121988,essv5125345,essv5084328,essv5096648,essv5117045,essv5030042,essv5072259,essv5157311,essv5095894,essv5049281,essv5126792,essv5046634,essv5121588,essv5130759,essv5078659,essv5037850,essv5009673,essv5065965,essv5041587,essv5103322,essv5054318,essv5021911,essv5097885,essv5125865,essv5103126,essv5147205,essv5160258,essv5022891,essv5092816,essv5079599,essv5025494,essv5075589,essv5065791,essv5111803,essv5024133,essv5127120,essv5115299,essv5061412,essv5112506,essv5028001,essv5144538,essv5033382,essv5155101,essv5098036,essv5008849,essv5030913,essv5028804,essv5069245,essv5048632,essv5041206,essv5109088,essv5113637,essv5003922,essv5123097,essv5147835,essv5007786,essv5133764,essv5064272,essv5112366,essv5002754,essv5060560,essv5107122,essv5098676,essv5086014,essv5014507,essv5147986,essv5106741,essv5056874,essv5104217,essv5152984,essv5019727,essv5114344,essv5036337,essv5039612,essv5033107,essv5137608,essv5086692,essv5157609,essv5071800,essv5153944,essv5018347,essv5147504,essv5055587,essv5115933,essv5147413,essv5055154,essv5002576,essv5083720,essv5058411,essv5078527,essv5041786,essv5157375,essv5100179,essv5050841,essv5097921,essv5032089,essv5072037,essv5153097,essv5102550,essv5145666,essv5054679,essv5070553,essv5014326,essv5035199,essv5029931,essv5093977,essv5048039,essv5010821,essv5135140,essv5134811,essv5052108,essv5030772,essv5028380,essv5025020,essv5085246,essv5026459,essv5014551,essv5065875,essv5105240,essv5030022,essv5067082,essv5086951,essv5079911,essv5127759,essv5016121,essv5104214,essv5067874,essv5143686,essv5051004,essv5126598,essv5115530,essv5151178,essv5146134,essv5099314,essv5024993,essv5038223,essv5036548,essv5006951,essv5051739,essv5089873,essv5058107,essv5123426,essv5110272,essv5047562,essv5159099,essv5127109,essv5029426,essv5058801,essv5079342,essv5009030,essv5096769,essv5024780,essv5090798,essv5128838,essv5134482,essv5092468,essv5096754,essv5114680,essv5004735,essv5043975,essv5057234,essv5103855,essv5006182,essv5136215,essv5099089,essv5134163,essv5084304,essv5021628,essv5010456,essv5086652,essv5148716,essv5128868,essv5043100,essv5116817,essv5128437,essv5071137,essv5102014,essv5005212,essv5027775,essv5131352,essv5007344,essv5063859,essv5005544,essv5006744,essv5008648,essv5066068,essv5028158,essv5076493,essv5114280,essv5053913,essv5134195,essv5070821,essv5060943,essv5068855,essv5146659,essv5033589,essv5055357,essv5112549,essv5106431,essv5064411,essv5062035,essv5074466,essv5065850,essv5051143,essv5160566,essv5007467,essv5105478,essv5143625,essv5111201,essv5083511,essv5107641,essv5124332,essv5054964,essv5066540,essv5133749,essv5159082,essv5106798,essv5061190,essv5006486,essv5078913,essv5119957,essv5017049,essv5091264,essv5045122,essv5088695,essv5111478,essv5058624,essv5102184,essv5151782,essv5135041,essv5022534,essv5133268,essv5130303,essv5096269,essv5145780,essv5051017,essv5056674,essv5107685,essv5136415,essv5105910,essv5009199,essv5057255,essv5009440,essv5079835,essv5096758,essv5153800,essv5090959,essv5039355,essv5003158,essv5152822,essv5101917,essv5047270,essv5086003,essv5097936,essv5094689,essv5061673,essv5118836,essv5002555,essv5021982,essv5071290,essv5078646,essv5108762,essv5113257,essv5064028,essv5077283,essv5032435,essv5034553,essv5103286,essv5026401,essv5059015,essv5136324,essv5135695,essv5048317,essv5071124,essv5152854,essv5076597,essv5103479,essv5032838 M 1184 850 0 CROCC NA06984,NA06985,NA06986,NA06991,NA06995,NA06997,NA07000,NA07014,NA07022,NA07031,NA07045,NA07051,NA07345,NA07346,NA07347,NA07349,NA07435,NA10835,NA10838,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10852,NA10853,NA10854,NA10855,NA10861,NA10863,NA10865,NA11831,NA11832,NA11840,NA11843,NA11891,NA11892,NA11918,NA11920,NA11931,NA11992,NA11994,NA12003,NA12006,NA12044,NA12045,NA12056,NA12057,NA12144,NA12154,NA12234,NA12248,NA12264,NA12273,NA12275,NA12282,NA12286,NA12287,NA12335,NA12340,NA12341,NA12342,NA12344,NA12347,NA12375,NA12383,NA12399,NA12400,NA12413,NA12489,NA12708,NA12740,NA12748,NA12749,NA12751,NA12752,NA12753,NA12760,NA12762,NA12763,NA12766,NA12776,NA12778,NA12812,NA12813,NA12814,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12865,NA12872,NA12873,NA12874,NA12875,NA12877,NA12889,NA12890,NA17965,NA17966,NA17967,NA17968,NA17969,NA17970,NA17974,NA17975,NA17976,NA17977,NA17980,NA17981,NA17982,NA17983,NA17986,NA17987,NA17988,NA17989,NA17990,NA17993,NA17995,NA17996,NA17997,NA17998,NA17999,NA18101,NA18102,NA18105,NA18106,NA18107,NA18108,NA18109,NA18112,NA18117,NA18118,NA18120,NA18122,NA18124,NA18125,NA18128,NA18129,NA18131,NA18132,NA18133,NA18134,NA18135,NA18136,NA18138,NA18139,NA18140,NA18144,NA18146,NA18150,NA18152,NA18153,NA18155,NA18156,NA18157,NA18158,NA18159,NA18160,NA18161,NA18166,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18515,NA18516,NA18517,NA18518,NA18520,NA18524,NA18526,NA18529,NA18532,NA18534,NA18537,NA18542,NA18543,NA18544,NA18545,NA18546,NA18548,NA18550,NA18555,NA18557,NA18558,NA18559,NA18561,NA18562,NA18563,NA18564,NA18566,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18596,NA18597,NA18599,NA18602,NA18603,NA18605,NA18610,NA18612,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18622,NA18623,NA18624,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18639,NA18640,NA18641,NA18642,NA18645,NA18647,NA18670,NA18682,NA18685,NA18689,NA18694,NA18704,NA18740,NA18745,NA18747,NA18748,NA18749,NA18854,NA18855,NA18857,NA18859,NA18860,NA18862,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18910,NA18911,NA18912,NA18914,NA18916,NA18923,NA18924,NA18925,NA18930,NA18933,NA18935,NA18939,NA18942,NA18943,NA18944,NA18945,NA18946,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18954,NA18955,NA18956,NA18957,NA18959,NA18960,NA18961,NA18963,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18978,NA18979,NA18980,NA18981,NA18987,NA18990,NA18991,NA18993,NA18994,NA18997,NA18999,NA19000,NA19001,NA19002,NA19005,NA19007,NA19010,NA19027,NA19038,NA19044,NA19046,NA19054,NA19056,NA19059,NA19062,NA19063,NA19065,NA19066,NA19067,NA19068,NA19070,NA19072,NA19074,NA19077,NA19079,NA19080,NA19081,NA19083,NA19084,NA19085,NA19086,NA19088,NA19093,NA19094,NA19095,NA19097,NA19098,NA19099,NA19101,NA19102,NA19103,NA19114,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19144,NA19146,NA19149,NA19150,NA19151,NA19152,NA19153,NA19161,NA19172,NA19175,NA19176,NA19179,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19203,NA19204,NA19206,NA19208,NA19209,NA19211,NA19213,NA19214,NA19215,NA19221,NA19222,NA19223,NA19224,NA19225,NA19226,NA19235,NA19236,NA19240,NA19247,NA19248,NA19249,NA19256,NA19257,NA19258,NA19307,NA19308,NA19309,NA19310,NA19311,NA19313,NA19315,NA19316,NA19317,NA19318,NA19324,NA19327,NA19328,NA19332,NA19334,NA19346,NA19347,NA19350,NA19352,NA19359,NA19360,NA19372,NA19373,NA19374,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19391,NA19393,NA19394,NA19396,NA19398,NA19399,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19448,NA19451,NA19452,NA19456,NA19457,NA19463,NA19467,NA19468,NA19471,NA19474,NA19625,NA19649,NA19650,NA19651,NA19653,NA19657,NA19658,NA19659,NA19662,NA19663,NA19664,NA19665,NA19675,NA19677,NA19678,NA19680,NA19685,NA19686,NA19703,NA19704,NA19705,NA19708,NA19712,NA19713,NA19714,NA19719,NA19720,NA19721,NA19723,NA19724,NA19726,NA19748,NA19750,NA19751,NA19755,NA19756,NA19759,NA19761,NA19762,NA19770,NA19771,NA19772,NA19773,NA19777,NA19789,NA19794,NA19796,NA19828,NA19834,NA19835,NA19836,NA19901,NA19902,NA19904,NA19914,NA19915,NA19916,NA19917,NA19918,NA19921,NA19982,NA19983,NA20126,NA20129,NA20279,NA20282,NA20284,NA20287,NA20288,NA20289,NA20290,NA20291,NA20295,NA20297,NA20300,NA20301,NA20302,NA20317,NA20319,NA20322,NA20332,NA20333,NA20334,NA20335,NA20336,NA20337,NA20341,NA20347,NA20348,NA20349,NA20350,NA20356,NA20357,NA20358,NA20363,NA20502,NA20505,NA20506,NA20508,NA20510,NA20512,NA20517,NA20518,NA20521,NA20522,NA20525,NA20527,NA20528,NA20529,NA20534,NA20540,NA20541,NA20542,NA20543,NA20581,NA20582,NA20586,NA20588,NA20752,NA20753,NA20754,NA20755,NA20756,NA20757,NA20758,NA20759,NA20761,NA20765,NA20766,NA20769,NA20771,NA20772,NA20774,NA20775,NA20778,NA20783,NA20785,NA20786,NA20792,NA20795,NA20796,NA20799,NA20800,NA20802,NA20803,NA20804,NA20805,NA20806,NA20807,NA20808,NA20809,NA20810,NA20811,NA20812,NA20813,NA20815,NA20816,NA20818,NA20819,NA20826,NA20828,NA20846,NA20849,NA20851,NA20853,NA20854,NA20856,NA20858,NA20866,NA20869,NA20870,NA20871,NA20872,NA20873,NA20883,NA20885,NA20887,NA20888,NA20890,NA20891,NA20892,NA20894,NA20906,NA20907,NA20911,NA21086,NA21088,NA21090,NA21091,NA21092,NA21094,NA21097,NA21098,NA21099,NA21102,NA21103,NA21106,NA21108,NA21109,NA21113,NA21115,NA21118,NA21119,NA21142,NA21143,NA21144,NA21295,NA21297,NA21300,NA21301,NA21302,NA21303,NA21307,NA21309,NA21316,NA21318,NA21333,NA21336,NA21344,NA21352,NA21353,NA21355,NA21357,NA21359,NA21360,NA21361,NA21362,NA21363,NA21364,NA21365,NA21366,NA21368,NA21370,NA21371,NA21378,NA21379,NA21381,NA21382,NA21383,NA21384,NA21385,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21402,NA21403,NA21404,NA21405,NA21408,NA21414,NA21415,NA21418,NA21421,NA21423,NA21435,NA21436,NA21439,NA21440,NA21441,NA21447,NA21448,NA21451,NA21454,NA21455,NA21457,NA21473,NA21476,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21489,NA21490,NA21491,NA21493,NA21494,NA21509,NA21512,NA21513,NA21517,NA21520,NA21521,NA21522,NA21523,NA21525,NA21526,NA21527,NA21528,NA21529,NA21574,NA21575,NA21576,NA21577,NA21580,NA21582,NA21587,NA21596,NA21597,NA21600,NA21601,NA21608,NA21611,NA21614,NA21615,NA21616,NA21617,NA21631,NA21632,NA21634,NA21635,NA21648,NA21678,NA21682,NA21686,NA21689,NA21693,NA21716,NA21717,NA21718,NA21723,NA21733,NA21738,NA21739,NA21768,NA21776,NA21784,NA21825 dgv118n100 1 17085289 17148816 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997739,nsv1000008 M 29084 4 0 CROCC nsv545673 1 17086470 17091065 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710898 M 17421 0 1 "" nsv834280 1 17087300 17322088 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443706,nssv1443741,nssv1443695,nssv1443728,nssv1443717,nssv1443752,nssv1443684,nssv1443673 M 95 0 8 ATP13A2,CROCC,MFAP2,PADI2,SDHB nsv437207 1 17089852 17129889 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467088 M 60 0 1 CROCC NA19208 dgv119n100 1 17089978 17131895 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007159,nsv1003614,nsv1004952 M 29084 4 0 CROCC dgv120n100 1 17089978 17197020 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013544,nsv1005792,nsv1000630 M 29084 3 0 ATP13A2,CROCC,MFAP2 dgv167n54 1 17091860 17123160 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545675,nsv545674 M 17421 0 2 CROCC dgv24n67 1 17095279 17145222 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821876,nsv821887,nsv821843 M 31 3 0 CROCC NA18552,NA18566,NA18947 nsv1004093 1 17097545 17130714 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472352,nssv3479262,nssv3477505 M 29084 1 2 CROCC dgv121n100 1 17097545 17134822 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005146,nsv1011902,nsv1001263,nsv1004277,nsv1004027 M 29084 0 7 CROCC dgv168n54 1 17097851 17131865 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545679,nsv545676 M 17421 0 2 CROCC nsv997723 1 17101281 17120973 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479153,nssv3470882,nssv3473113 M 29084 0 3 "" dgv56e59 1 17101452 17102950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3351872,esv3378698 M 185 2 0 "" NA12878,NA12891 dgv25n67 1 17102401 17133885 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821854,nsv821865,nsv821898 M 31 3 0 CROCC AK2,NA18537,NA18972 nsv545677 1 17102578 17115318 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710902 M 17421 0 1 "" esv3431776 1 17105152 17107250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692070 M 185 1 0 "" NA12891 esv3342657 1 17105683 17106433 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740943 M 185 1 0 "" NA19240 nsv545678 1 17105790 17120105 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710904,nssv710903,nssv710906,nssv710905 M 17421 0 4 "" esv3406906 1 17106152 17107850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692071 M 185 1 0 "" NA12878 nsv1006384 1 17108259 17126113 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467303 M 29084 0 1 CROCC dgv122n100 1 17108259 17134463 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013867,nsv998844,nsv1000426 M 29084 5 0 CROCC dgv123n100 1 17108259 17134822 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000314,nsv998774,nsv1009231,nsv1013296,nsv1002017,nsv1004895,nsv997427,nsv997518,nsv1009905,nsv1005762,nsv997816,nsv1003831,nsv1013736,nsv1003807,nsv998672,nsv998767 M 29084 0 34 CROCC dgv124n100 1 17108259 17134822 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008279,nsv1005306,nsv1012684,nsv1013207,nsv1005265 M 29084 22 28 CROCC nsv508947 1 17108899 17210197 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619776,nssv623774 M 4 2 0 ATP13A2,CROCC,MFAP2 NA10860,NA18994 dgv169n54 1 17111281 17129889 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545680,nsv545683 M 17421 0 2 CROCC dgv170n54 1 17111281 17136952 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545685,nsv545681,nsv545682,nsv545684 M 17421 0 4 CROCC dgv125n100 1 17112042 17130518 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014417,nsv1008214,nsv1010177 M 29084 0 7 CROCC nsv1002599 1 17112042 17167787 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481639 M 29084 1 0 CROCC esv3892525 1 17112560 17155012 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25783921 M 3017 0 1 CROCC nsv1002613 1 17114941 17148816 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481654 M 29084 0 1 CROCC dgv126n100 1 17117788 17134822 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008243,nsv1001522,nsv1001234,nsv1000311,nsv1003945 M 29084 0 7 CROCC nsv1004224 1 17117788 17134822 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471310,nssv3477575,nssv3469116 M 29084 2 1 CROCC dgv171n54 1 17118222 17135964 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545689,nsv545686,nsv545688,nsv545687 M 17421 0 9 CROCC nsv482201 1 17121032 17172061 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558562 M 1 1 0 CROCC KB1 nsv437208 1 17121472 17140916 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467089 M 60 0 1 CROCC NA19240 nsv438355 1 17126415 17137953 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469185,nssv469407,nssv469518,nssv469296 M 269 0 4 CROCC NA19207,NA19208,NA19238,NA19240 nsv471438 1 17127282 17153825 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548300,nssv548289,nssv548311 M 3 3 0 CROCC JDW,NA18507,YH dgv127n100 1 17129892 17164469 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000171,nsv1012323 M 29084 0 2 CROCC dgv57e59 1 17143352 17144950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3375285,esv3347572,esv3452155 M 185 3 0 CROCC NA12878,NA12891,NA12892 esv3343101 1 17152552 17153350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692076 M 185 1 0 CROCC NA12891 esv3360661 1 17208470 17208492 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863677 M 185 1 0 ATP13A2 NA12005 nsv545690 1 17239458 17358240 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710923 M 17421 1 0 PADI2,SDHB esv2422314 1 17279980 17415709 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161240 M 181 1 0 PADI1,PADI2 ND01703 nsv460662 1 17285088 17358138 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537201 M 1557 0 1 PADI2 HGDP00896 nsv545691 1 17285088 17358138 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173787 M 17421 0 1 PADI2 HGDP00896 nsv1009931 1 17299349 17360538 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468895 M 29084 1 0 PADI2 esv3305460 1 17313710 17313711 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7750186,essv7744629,essv7756324,essv7758201,essv7740897,essv7761430,essv7754097,essv7744319,essv7756230,essv7741691,essv7746912,essv7762283,essv7749234,essv7752737,essv7760271,essv7749714,essv7755485,essv7743175 M 185 18 0 PADI2 NA18486,NA18489,NA18498,NA18499,NA18502,NA18505,NA18522,NA18853,NA18856,NA18870,NA18912,NA18916,NA19093,NA19108,NA19116,NA19137,NA19138,NA19239 esv3310333 1 17313719 17313720 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837611,essv7836931,essv7838900 M 185 3 0 PADI2 NA19238,NA19239,NA19240 esv2422211 1 17325509 17357086 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161296 M 181 1 0 "" ND03833 nsv1004390 1 17341232 17427440 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700280 M 29084 1 0 PADI1 esv3892636 1 17358138 17383290 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25782507,essv25786663,essv25782733,essv25782334,essv25781376,essv25798477 M 3017 0 6 "" esv2762267 1 17358168 17386439 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007744 M 1109 0 1 "" SW_1378 esv2627134 1 17364857 17365637 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5378317 M 1 1 0 "" NA18507 nsv512720 1 17365270 17366158 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625345 M 1 1 0 "" 1 esv1174577 1 17365301 17365301 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4070341 M 2 1 0 "" HuRef nsv834291 1 17403404 17549299 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443774,nssv1443763 M 95 2 0 PADI1,PADI3,PADI4 esv1489199 1 17407679 17407679 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3883314 M 2 1 0 PADI1 HuRef esv2762134 1 17422708 17425462 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005180 M 1109 0 1 PADI1 RW_0111 nsv470700 1 17424530 17467179 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547713 M 443 0 1 PADI1,PADI3 HGDP00298 nsv545692 1 17427440 17530121 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710924 M 17421 0 1 PADI1,PADI3,PADI4 nsv511680 1 17439160 17441668 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626318 M 1 0 1 PADI1 1 esv1009642 1 17440535 17440822 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578196 M 3 0 1 PADI1 HuRef esv1398963 1 17440584 17440872 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4132855 M 2 0 1 PADI1 HuRef nsv508958 1 17443929 17495719 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619777,nssv623775,nssv621083 M 4 3 0 PADI1,PADI3 NA10860,NA15510,NA18994 dgv128n100 1 17448915 17508587 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011098,nsv1005242 M 29084 3 0 PADI3,PADI4 nsv481528 1 17449841 17449841 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013550 M 9 0 0 PADI3 nsv521814 1 17459240 17464911 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694586 M 2026 0 1 PADI3 dgv129n100 1 17460749 17495484 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007323,nsv1000395,nsv1003069,nsv1014175,nsv997473,nsv1007766,nsv1004800,nsv1000437,nsv1015132,nsv1000599 M 29084 26 0 PADI3 nsv516116 1 17464911 17486396 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv654821,nssv669330,nssv668375,nssv666311,nssv691565 M 2026 5 0 PADI3 nsv1011954 1 17467471 17489684 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470184,nssv3477036,nssv3700287,nssv3482059 M 29084 4 0 PADI3 esv2762268 1 17467483 17489696 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7007855 M 1109 1 0 PADI3 SW_1213 nsv545693 1 17468398 17486396 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710925 M 17421 1 0 PADI3 nsv1011242 1 17468398 17501632 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472097 M 29084 1 0 PADI3 nsv1003937 1 17476192 17567288 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467117 M 29084 0 1 PADI3,PADI4 nsv4076 1 17482320 17493999 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv955 M 9 1 0 PADI3 NA19240 esv1667289 1 17488383 17488383 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3808815 M 2 1 0 "" HuRef esv997286 1 17488389 17492015 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565762 M 3 1 0 "" HuRef nsv481233 1 17525271 17525271 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019868 M 9 0 0 PADI4 nsv545694 1 17547408 17549430 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710926 M 17421 0 1 PADI4 nsv511142 1 17547408 17553864 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625376 M 1 0 1 PADI4 1 esv33950 1 17548102 17549701 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95154,essv96384,essv95937,essv95433,essv93123,essv96650,essv95861,essv101249,essv100231,essv101586,essv96134,essv96455,essv92812,essv100601,essv94943 M 51 12 3 PADI4 21603,21618,21721,21847,21863,21911,21944,22007,22011,22127,22231,22261,22286,22298,22371 esv21592 1 17548473 17551517 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15841,esv15492,esv16374 M 40 0 14 PADI4 NA06985,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12489,NA12749,NA12828,NA15510 esv4441 1 17548480 17550349 CNV loss Wang_et_al_2008 18987735 Sequencing essv26882 M 1 0 1 PADI4 YH nsv511681 1 17548587 17550285 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626319 M 1 0 1 PADI4 1 nsv545696 1 17548878 17549481 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710928 M 17421 1 0 PADI4 dgv172n54 1 17548878 17549556 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545702,nsv545695 M 17421 0 2 PADI4 nsv545697 1 17548878 17549783 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711026,nssv711082,nssv711138,nssv710993,nssv711073,nssv711041,nssv711057,nssv711046,nssv711081,nssv711090,nssv710986,nssv711084,nssv710975,nssv711091,nssv711083,nssv711086,nssv711085,nssv711087,nssv711088,nssv711089,nssv711094,nssv711018,nssv711031,nssv711093,nssv711092,nssv711104,nssv710988,nssv711097,nssv711098,nssv711096,nssv711095,nssv711099,nssv711102,nssv711103,nssv711101,nssv711100,nssv710990,nssv711105,nssv710999,nssv711036,nssv711034,nssv711120,nssv711111,nssv711107,nssv711106,nssv711108,nssv711109,nssv711110,nssv711114,nssv711119,nssv711112,nssv711113,nssv711025,nssv711004,nssv711118,nssv711117,nssv711115,nssv711116,nssv711011,nssv711121,nssv711136,nssv711023,nssv711125,nssv711123,nssv711122,nssv711124,nssv711135,nssv711126,nssv711137,nssv711129,nssv711134,nssv711128,nssv711127,nssv711133,nssv711130,nssv711132,nssv711131,nssv711194,nssv710973,nssv711139,nssv711195,nssv711148,nssv711050,nssv711140,nssv711141,nssv711145,nssv711147,nssv711143,nssv711142,nssv711144,nssv711146,nssv711149,nssv711150,nssv711164,nssv711155,nssv711152,nssv711154,nssv711153,nssv711151,nssv711158,nssv711156,nssv711157,nssv711161,nssv711162,nssv711160,nssv711159,nssv711163,nssv711165,nssv711172,nssv710981,nssv711027,nssv711166,nssv711171,nssv711167,nssv711168,nssv711169,nssv711170,nssv711173,nssv711181,nssv711174,nssv711180,nssv711176,nssv711175,nssv711177,nssv711182,nssv711179,nssv711178,nssv711010,nssv711183,nssv711185,nssv711186,nssv711187,nssv711193,nssv711184,nssv711192,nssv711191,nssv711190,nssv711189,nssv711188,nssv711035,nssv711012,nssv711196,nssv711201,nssv711072,nssv711048,nssv711070,nssv711197,nssv711199,nssv711200,nssv711198,nssv711205,nssv711028,nssv711202,nssv711206,nssv710995,nssv711204,nssv711203,nssv711002,nssv711221,nssv711220,nssv711212,nssv711208,nssv711207,nssv711211,nssv711210,nssv711209,nssv711214,nssv711219,nssv711215,nssv711213,nssv711216,nssv711218,nssv711217,nssv711017,nssv711223,nssv711224,nssv711051,nssv711222,nssv710998,nssv710991,nssv711003,nssv711045,nssv711030,nssv710985,nssv711000,nssv711001,nssv711016,nssv711068,nssv711071,nssv711013,nssv710984,nssv710997,nssv711029,nssv711044,nssv711066,nssv711058,nssv710974,nssv710983,nssv711014,nssv711015,nssv711008,nssv711074,nssv711047,nssv711033,nssv711075,nssv711080,nssv711019,nssv710994,nssv711021,nssv711009,nssv710982,nssv710936,nssv711043,nssv711053,nssv711069,nssv711062,nssv711007,nssv710996,nssv711020,nssv710935,nssv710929,nssv711037,nssv711040,nssv710934,nssv711064,nssv711006,nssv711042,nssv711056,nssv710932,nssv710931,nssv710930,nssv710933,nssv711005,nssv710942,nssv711052,nssv711079,nssv711067,nssv711054,nssv711022,nssv711039,nssv710972,nssv710937,nssv710953,nssv710938,nssv711032,nssv710940,nssv710941,nssv710939,nssv710980,nssv710971,nssv710979,nssv710943,nssv710977,nssv710947,nssv710976,nssv711065,nssv710978,nssv710944,nssv710952,nssv710945,nssv710946,nssv710949,nssv711061,nssv710948,nssv710950,nssv710951,nssv711078,nssv711076,nssv710989,nssv711077,nssv710970,nssv710992,nssv710954,nssv711060,nssv710957,nssv711063,nssv711059,nssv710987,nssv710956,nssv710955,nssv710958,nssv710969,nssv711038,nssv711055,nssv711049,nssv710959,nssv710960,nssv710968,nssv711024,nssv710965,nssv710966,nssv710964,nssv710961,nssv710963,nssv710962,nssv710967 M 17421 0 296 PADI4 dgv173n54 1 17548878 17555628 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545698,nsv545709 M 17421 0 2 PADI4 dgv26n67 1 17548925 17549903 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv821921,nsv821909 M 31 0 10 PADI4 AK10,AK18,AK2,AK6,NA18542,NA18547,NA18582,NA18592,NA18947,NA18951 dgv174n54 1 17548930 17549327 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545701,nsv545699,nsv545700 M 17421 0 4 PADI4 dgv175n54 1 17549084 17549783 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545705,nsv545707,nsv545703,nsv545708 M 17421 0 7 PADI4 dgv176n54 1 17549135 17549495 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545704,nsv545706 M 17421 0 2 PADI4 nsv473158 1 17573508 17573508 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016455 M 9 1 0 PADI6 NA19129 esv2590404 1 17577359 17578787 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5203286 M 1 0 1 PADI6 NA18507 esv2214804 1 17578009 17578656 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4985556 M 1 0 1 PADI6 NA18507 esv2626551 1 17578194 17578505 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5305827 M 1 0 1 PADI6 NA18507 nsv478562 1 17595372 17595372 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011985 M 9 1 0 PADI6 NA18507 nsv945802 1 17605774 17607631 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755910,nssv1754318,nssv1755896,nssv1754312,nssv1755892,nssv1755954,nssv1755900,nssv1755956,nssv1755890,nssv1755925,nssv1755962,nssv1755915,nssv1755907,nssv1755917,nssv1755897,nssv1755952,nssv1755898,nssv1755972,nssv1755903,nssv1755951,nssv1755877,nssv1755937,nssv1755893,nssv1755960,nssv1755970,nssv1755958,nssv1755879,nssv1755955,nssv1755966,nssv1755923,nssv1755969,nssv1755939,nssv1755894,nssv1755945,nssv1755878,nssv1755905,nssv1755899,nssv1755901,nssv1755908,nssv1755926,nssv1755895,nssv1755927,nssv1755884,nssv1755948,nssv1755886,nssv1755953,nssv1755889,nssv1755916,nssv1755883,nssv1755973,nssv1755885,nssv1755932,nssv1755882,nssv1755938,nssv1755887,nssv1754317,nssv1755881,nssv1755922,nssv1755964,nssv1754311,nssv1755967,nssv1755906,nssv1755888,nssv1755941,nssv1755963,nssv1755933,nssv1755961,nssv1755942,nssv1755965,nssv1755959,nssv1755971,nssv1755914,nssv1755930,nssv1755940,nssv1755928,nssv1754315,nssv1755950,nssv1755911,nssv1755947,nssv1755919,nssv1755909,nssv1755929,nssv1755944,nssv1755920,nssv1755904,nssv1755918,nssv1755936,nssv1755943,nssv1755921,nssv1755912,nssv1755876,nssv1754316,nssv1755934,nssv1754313,nssv1754314,nssv1755931,nssv1755949 M 97 10 0 RCC2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821932 1 17637086 17639506 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426379 M 31 1 0 RCC2 AK6 nsv475340 1 17642385 17642385 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019257 M 9 1 0 "" NA19240 nsv1000724 1 17649408 17713578 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464679 M 29084 1 0 "" nsv945804 1 17688282 17701706 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754377,nssv1754334,nssv1754392,nssv1754332,nssv1754357,nssv1754343,nssv1754378,nssv1754321,nssv1754344,nssv1754402,nssv1754414,nssv1754339,nssv1754372,nssv1754330,nssv1754374,nssv1754320,nssv1754411,nssv1754325,nssv1754412,nssv1754406,nssv1754395,nssv1754399,nssv1754383,nssv1754329,nssv1754353,nssv1754337,nssv1754360,nssv1754327,nssv1754363,nssv1754404,nssv1754352,nssv1754340,nssv1754391,nssv1754350,nssv1754371,nssv1754347,nssv1754389,nssv1754336,nssv1754375,nssv1754324,nssv1754369,nssv1754397,nssv1754388,nssv1754326,nssv1754366,nssv1754398,nssv1754390,nssv1754333,nssv1754410,nssv1754335,nssv1754407,nssv1754322,nssv1754319,nssv1754331,nssv1754358,nssv1754338,nssv1754367,nssv1754348,nssv1754342,nssv1754328,nssv1754351,nssv1754400,nssv1754359,nssv1754341,nssv1754354,nssv1754405,nssv1754356,nssv1754403,nssv1754387,nssv1754323,nssv1754368,nssv1754401,nssv1754415,nssv1754346,nssv1754349,nssv1754408,nssv1754384,nssv1754409,nssv1754345,nssv1754370,nssv1754365,nssv1754394,nssv1754396,nssv1754380,nssv1754355,nssv1754382,nssv1754364,nssv1755032,nssv1754373,nssv1754413,nssv1754393,nssv1754385,nssv1754379,nssv1754381,nssv1754386,nssv1754361,nssv1754362 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4187 1 17702531 17736580 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2861 M 9 1 0 "" NA18555 nsv834302 1 17730518 17912534 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443785,nssv1443796 M 95 0 2 ARHGEF10L esv997027 1 17734365 17749665 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564910 M 3 0 0 ARHGEF10L HuRef nsv818089 1 17760550 17775885 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417309 M 112 0 1 ARHGEF10L NA18608 nsv470701 1 17760550 17791187 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547714 M 443 0 1 ARHGEF10L HGDP00825 esv988531 1 17761998 17772536 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563476 M 3 0 1 ARHGEF10L HuRef nsv460673 1 17765403 17791187 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537212 M 1557 0 1 ARHGEF10L HGDP00553 nsv545710 1 17765403 17791187 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173788 M 17421 0 1 ARHGEF10L HGDP00553 nsv4298 1 17814253 17835256 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8255 M 9 0 1 ARHGEF10L NA12156 esv2764267 1 17871068 17876533 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005182,essv7005181 M 1109 0 2 ARHGEF10L RW_0079,RW_0090 nsv518693 1 17871364 17873214 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696144 M 2026 0 1 ARHGEF10L nsv512721 1 17887887 17888572 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625346 M 1 1 0 ARHGEF10L 1 esv3351922 1 17888526 17888721 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652056 M 185 1 0 ARHGEF10L NA19240 nsv508248 1 17936992 18012892 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622757 M 4 0 1 ACTL8 NA18994 nsv518590 1 17946092 17947289 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696036 M 2026 0 1 "" nsv161140 1 18096718 18096718 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179718 M 24 "" esv275339 1 18103122 18109206 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585726 M 1250 0 1 "" esv3343287 1 18143682 18143693 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898713,essv8898716,essv8898718,essv8898724,essv8898721,essv8898720,essv8898726,essv8898717,essv8898715,essv8898719,essv8898723,essv8898722 M 185 12 0 "" NA18499,NA18504,NA18508,NA18510,NA18517,NA18870,NA18871,NA18909,NA19093,NA19099,NA19116,NA19129 esv3305133 1 18143683 18143684 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7741380,essv7761490,essv7756261,essv7759049,essv7749767,essv7740953,essv7758530,essv7744162,essv7758822,essv7740581,essv7760422,essv7753431 M 185 12 0 "" NA18499,NA18504,NA18508,NA18510,NA18517,NA18870,NA18871,NA18909,NA19093,NA19099,NA19116,NA19129 nsv834313 1 18154502 18361688 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443829,nssv1443818,nssv1443807 M 95 0 3 IGSF21 nsv508969 1 18185254 18251218 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619778,nssv623776 M 4 2 0 "" NA10860,NA18994 esv3305695 1 18204033 18204034 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7744658,essv7741374 M 185 2 0 "" NA18871,NA19190 esv3431824 1 18204054 18204114 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898728,essv8898727 M 185 2 0 "" NA18871,NA19190 nsv478978 1 18213061 18213061 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012826 M 9 0 0 "" nsv1014415 1 18219297 18246326 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700295 M 29084 0 1 "" nsv521926 1 18221371 18284968 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694696 M 2026 0 1 "" nsv526833 1 18247527 18250377 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703190 M 2026 0 1 "" nsv475223 1 18288015 18288015 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015205 M 9 1 0 "" NA19240 dgv177n54 1 18292731 18316579 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545711,nsv545712 M 17421 0 2 IGSF21 nsv834324 1 18373494 18553921 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443840 M 95 1 0 IGSF21 nsv4409 1 18379584 18412953 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8323 M 9 1 0 IGSF21 NA12156 nsv460684 1 18416371 18430332 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537223 M 1557 0 1 IGSF21 HGDP00554 nsv545713 1 18416371 18430332 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173789 M 17421 0 1 IGSF21 HGDP00554 nsv4520 1 18434506 18469664 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3912 M 9 1 0 IGSF21 NA12878 nsv478816 1 18440824 18440824 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012525 M 9 1 0 IGSF21 NA18507 nsv545714 1 18449300 18504955 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711243 M 17421 0 1 IGSF21 dgv130n100 1 18449697 18474485 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011048,nsv1011251 M 29084 0 8 IGSF21 nsv528445 1 18451625 18473411 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705040 M 2026 0 1 IGSF21 nsv834336 1 18499440 18685787 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443852 M 95 0 1 IGSF21,KLHDC7A nsv4631 1 18502088 18534847 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6396 M 9 1 0 IGSF21 NA12156 esv994039 1 18529669 18529764 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570521 M 3 0 1 IGSF21 HuRef nsv545715 1 18545361 18602892 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711244 M 17421 0 1 IGSF21 nsv475630 1 18569676 18569676 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016293 M 9 1 0 IGSF21 NA12878 nsv4743 1 18575182 18620397 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8453 M 9 0 1 IGSF21 NA12156 nsv545716 1 18631964 18647370 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711245 M 17421 0 1 "" esv3302487 1 18665120 18665198 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731444,essv7731195 M 185 2 0 "" NA12878,NA12891 esv995072 1 18665125 18665125 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3567950 M 3 1 0 "" HuRef nsv160887 1 18665127 18665127 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179465 M 24 "" esv3345928 1 18665134 18665210 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670855,essv8670854 M 185 2 0 "" NA12878,NA12891 esv1135568 1 18665188 18665188 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4108538 M 2 1 0 "" HuRef nsv159998 1 18665196 18665196 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178576 M 24 "" nsv545717 1 18671872 18691288 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711246 M 17421 0 1 KLHDC7A esv275146 1 18672834 18679704 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585623 M 1250 0 1 "" nsv518311 1 18685613 18686032 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695742 M 2026 0 1 "" nsv1006958 1 18688858 18945513 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474041 M 29084 1 0 PAX7 nsv4854 1 18745518 18791168 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6404 M 9 0 1 "" NA12156 nsv460706 1 18766179 18781452 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537241 M 1557 0 1 "" HGDP01278 nsv545718 1 18766179 18781452 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173790 M 17421 0 1 "" HGDP01278 esv1600907 1 18797221 18797291 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4315808 M 2 0 1 "" HuRef nsv4965 1 18804399 18837973 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5358 M 9 1 0 PAX7 NA19129 nsv1008797 1 18828484 18876820 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482266 M 29084 1 0 PAX7 esv3417922 1 18852270 18852278 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863678 M 185 1 0 PAX7 NA12005 nsv5076 1 18858189 18902861 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8574 M 9 0 1 PAX7 NA12156 nsv506920 1 18868065 18874065 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619225 M 4 0 0 PAX7 NA10860 esv2599950 1 18925076 18925227 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5276923 M 1 0 1 PAX7 NA18507 esv1070523 1 18943551 18943551 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4207695 M 2 1 0 PAX7 HuRef nsv5187 1 18954665 18999571 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8645 M 9 0 1 "" NA12156 nsv475087 1 18973298 18973298 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015109 M 9 1 0 "" NA18956 esv2589469 1 19023733 19025210 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5385528 M 1 0 1 "" NA18507 esv3876 1 19024338 19024992 CNV loss Wang_et_al_2008 18987735 Sequencing essv26317 M 1 0 1 "" YH dgv59e59 1 19056352 19058050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3348156,esv3451670,esv3403682 M 185 3 0 TAS1R2 NA19238,NA19239,NA19240 nsv472669 1 19067789 19067789 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012363 M 9 1 0 "" NA18555 nsv545719 1 19072767 19080780 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711247 M 17421 0 1 ALDH4A1 nsv479029 1 19096592 19096592 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011616 M 9 0 0 ALDH4A1 nsv834347 1 19115358 19341509 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443863 M 95 1 0 IFFO2,UBR4 nsv512722 1 19125008 19125494 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625347 M 1 1 0 IFFO2 1 esv26882 1 19198813 19201050 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16565 M 40 0 1 "" NA18858 esv21929 1 19228238 19232463 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16928 M 40 0 1 "" NA19257 nsv5298 1 19237962 19275195 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2867,nssv5363,nssv3923 M 9 3 0 UBR4 NA12878,NA18555,NA19129 nsv508980 1 19241429 19296838 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621084 M 4 1 0 UBR4 NA15510 nsv545720 1 19248615 19259657 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711248 M 17421 0 1 "" nsv545721 1 19255278 19259821 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711251,nssv711249,nssv711250 M 17421 1 2 "" nsv545722 1 19255278 19259929 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711252 M 17421 1 0 "" nsv545723 1 19255278 19267311 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711253 M 17421 1 0 "" nsv545724 1 19258945 19259821 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711254,nssv711255,nssv711261,nssv711257,nssv711256,nssv711258,nssv711259,nssv711260 M 17421 1 7 "" esv1963532 1 19259049 19259392 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4528609 M 1 0 1 "" NA18507 esv29322 1 19259249 19259959 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11291 M 40 0 2 "" NA12006,NA19225 nsv545725 1 19259278 19259873 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711262,nssv711265,nssv711264,nssv711263,nssv711268,nssv711267,nssv711266 M 17421 0 7 "" dgv178n54 1 19259278 19259929 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545728,nsv545726 M 17421 14 0 "" nsv545727 1 19259278 19265620 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711282 M 17421 0 1 "" nsv512723 1 19260386 19260504 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625348 M 1 1 0 "" 1 nsv477004 1 19342298 19342298 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015931 M 9 1 0 UBR4 NA12878 nsv947415 1 19349760 19352466 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761244 M 97 1 0 UBR4 HGDP00665 nsv470702 1 19415518 19452556 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547715 M 443 1 0 EMC1,MRTO4 HGDP01179 nsv471971 1 19422781 19422781 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018521 M 9 1 0 EMC1 NA18555 nsv945806 1 19466334 19471350 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755064,nssv1755095,nssv1755044,nssv1755139,nssv1755070,nssv1755119,nssv1755046,nssv1755069,nssv1755050,nssv1755135,nssv1755125,nssv1755079,nssv1755054,nssv1755096,nssv1755043,nssv1755084,nssv1755066,nssv1755086,nssv1755121,nssv1755100,nssv1755073,nssv1755068,nssv1755126,nssv1755078,nssv1755062,nssv1755072,nssv1755045,nssv1755074,nssv1755124,nssv1755111,nssv1755127,nssv1755103,nssv1755122,nssv1755117,nssv1755120,nssv1755114,nssv1755063,nssv1755075,nssv1755129,nssv1755112,nssv1755059,nssv1755085,nssv1755048,nssv1755089,nssv1755128,nssv1755082,nssv1755049,nssv1755094,nssv1755061,nssv1755106,nssv1755057,nssv1755099,nssv1755047,nssv1755133,nssv1755123,nssv1755087,nssv1755053,nssv1755101,nssv1755056,nssv1755076,nssv1755052,nssv1755138,nssv1755060,nssv1755088,nssv1755058,nssv1755131,nssv1755071,nssv1755108,nssv1755055,nssv1755110,nssv1755051,nssv1755091,nssv1755107,nssv1755067,nssv1755042,nssv1755097,nssv1755080,nssv1755083,nssv1755136,nssv1755081,nssv1755105,nssv1755116,nssv1755137,nssv1755115,nssv1755132,nssv1755090,nssv1755118,nssv1755130,nssv1755077,nssv1755098,nssv1755113,nssv1755102,nssv1755092,nssv1755065,nssv1755104,nssv1755109,nssv1755134 M 97 10 0 AKR7L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26443 1 19472219 19487114 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11560 M 40 0 2 AKR7A3,AKR7L NA18523,NA18858 nsv473677 1 19475606 19475606 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010781 M 9 1 0 "" NA19129 nsv472824 1 19480677 19480677 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019594 M 9 1 0 "" NA18555 nsv945807 1 19481855 19485872 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755152,nssv1755170,nssv1755162,nssv1755213,nssv1755156,nssv1755172,nssv1755169,nssv1755200,nssv1755155,nssv1755163,nssv1755148,nssv1755207,nssv1755223,nssv1755232,nssv1755141,nssv1755233,nssv1755144,nssv1755196,nssv1755142,nssv1755214,nssv1755149,nssv1755211,nssv1755146,nssv1755184,nssv1755160,nssv1755176,nssv1755220,nssv1755188,nssv1755225,nssv1755190,nssv1755161,nssv1755179,nssv1755164,nssv1755202,nssv1755157,nssv1755192,nssv1755147,nssv1755209,nssv1755224,nssv1755217,nssv1755219,nssv1755166,nssv1755227,nssv1755212,nssv1755226,nssv1755140,nssv1755159,nssv1755182,nssv1755153,nssv1755215,nssv1755171,nssv1755208,nssv1755218,nssv1755201,nssv1755222,nssv1755167,nssv1755168,nssv1755193,nssv1755221,nssv1755231,nssv1755145,nssv1755177,nssv1755150,nssv1755216,nssv1755143,nssv1755204,nssv1755154,nssv1755205,nssv1755158,nssv1755236,nssv1755151,nssv1755228,nssv1755237,nssv1755174,nssv1755195,nssv1755198,nssv1755180,nssv1755186,nssv1755229,nssv1755187,nssv1755199,nssv1755206,nssv1755185,nssv1755210,nssv1755191,nssv1755197,nssv1755230,nssv1755175,nssv1755203,nssv1755178,nssv1755234,nssv1755183,nssv1755181,nssv1755189,nssv1755235,nssv1755165,nssv1755173 M 97 10 0 AKR7A3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945808 1 19505070 19508462 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755251,nssv1755286,nssv1755260,nssv1755273,nssv1755262,nssv1755334,nssv1755242,nssv1755315,nssv1755239,nssv1755277,nssv1755254,nssv1755302,nssv1755322,nssv1755304,nssv1755255,nssv1755306,nssv1755266,nssv1755287,nssv1755324,nssv1755271,nssv1755317,nssv1755261,nssv1755259,nssv1755299,nssv1755247,nssv1755263,nssv1755319,nssv1755329,nssv1755258,nssv1755331,nssv1755269,nssv1755312,nssv1755321,nssv1755292,nssv1755326,nssv1755332,nssv1755244,nssv1755313,nssv1755318,nssv1755310,nssv1755245,nssv1755279,nssv1755323,nssv1755311,nssv1755249,nssv1755308,nssv1755257,nssv1755265,nssv1755240,nssv1755327,nssv1755320,nssv1755284,nssv1755248,nssv1755330,nssv1755243,nssv1755305,nssv1755267,nssv1755291,nssv1755250,nssv1755316,nssv1755246,nssv1755282,nssv1755253,nssv1755280,nssv1755252,nssv1755270,nssv1755256,nssv1755335,nssv1755325,nssv1755288,nssv1755241,nssv1755238,nssv1755314,nssv1755293,nssv1755274,nssv1755290,nssv1755298,nssv1755275,nssv1755301,nssv1755307,nssv1755297,nssv1755294,nssv1755289,nssv1755309,nssv1755276,nssv1755303,nssv1755278,nssv1755300,nssv1755336,nssv1755264,nssv1755281,nssv1755268,nssv1755285,nssv1755283,nssv1755272,nssv1755328,nssv1755333 M 97 10 0 AKR7A2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2547343 1 19519310 19521534 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5328741 M 1 0 1 PQLC2 NA18507 nsv834358 1 19600452 19778614 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443874 M 95 0 1 CAPZB nsv5409 1 19603885 19608461 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1934 M 9 1 0 CAPZB NA18555 nsv1014816 1 19626434 19648398 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478468 M 29084 0 1 CAPZB esv2398290 1 19633847 19634376 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4666927 M 1 0 1 CAPZB NA18507 esv3747 1 19633947 19634251 CNV loss Wang_et_al_2008 18987735 Sequencing essv26188 M 1 0 1 CAPZB YH esv6224 1 19633962 19634251 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28665 M 1 0 0 CAPZB nsv471771 1 19633977 19634198 CNV loss Hinds_et_al_2006 16327809 Oligo aCGH,PCR nssv646052 M 95 CAPZB esv3386001 1 19687305 19687314 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863679 M 185 1 0 "" NA12005 nsv470703 1 19722243 19776798 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547716 M 443 1 0 "" HGDP01049 nsv1011246 1 19733284 19808223 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700300 M 29084 1 0 MINOS1,MINOS1-NBL1,RPS14P3 nsv508991 1 19766655 19904991 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621085 M 4 1 0 HTR6,MINOS1,MINOS1-NBL1,NBL1,RPS14P3,TMCO4 NA15510 esv3309260 1 19770867 19770868 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838020,essv7837805,essv7838466 M 185 3 0 "" NA12878,NA12891,NA12892 esv3335212 1 19770868 19770881 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673879,essv8673878 M 185 2 0 "" NA19238,NA19240 esv1007512 1 19802816 19819397 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565353 M 3 0 0 MINOS1,MINOS1-NBL1,RPS14P3 HuRef nsv945809 1 19806603 19807550 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755359,nssv1755428,nssv1755347,nssv1755396,nssv1755353,nssv1755388,nssv1755343,nssv1755380,nssv1755423,nssv1755410,nssv1755346,nssv1755367,nssv1755420,nssv1755371,nssv1755338,nssv1755363,nssv1755350,nssv1755370,nssv1755355,nssv1755384,nssv1755354,nssv1755386,nssv1755366,nssv1755434,nssv1755422,nssv1755399,nssv1755417,nssv1755375,nssv1755357,nssv1755403,nssv1755415,nssv1755413,nssv1755348,nssv1755360,nssv1755361,nssv1755404,nssv1755344,nssv1755425,nssv1755424,nssv1755376,nssv1755339,nssv1755402,nssv1755340,nssv1755391,nssv1755421,nssv1755432,nssv1755341,nssv1755377,nssv1755418,nssv1755400,nssv1755342,nssv1755430,nssv1755345,nssv1755362,nssv1755416,nssv1755426,nssv1755351,nssv1755401,nssv1755368,nssv1755378,nssv1755358,nssv1755394,nssv1755365,nssv1755429,nssv1755419,nssv1755337,nssv1755349,nssv1755411,nssv1755356,nssv1755427,nssv1755352,nssv1755385,nssv1755409,nssv1755390,nssv1755405,nssv1755387,nssv1755389,nssv1755395,nssv1755406,nssv1755372,nssv1755369,nssv1755381,nssv1755431,nssv1755392,nssv1755364,nssv1755433,nssv1755374,nssv1755393,nssv1755379,nssv1755412,nssv1755407,nssv1755408,nssv1755382,nssv1755414,nssv1755373,nssv1755383,nssv1755398 M 97 10 0 MINOS1,MINOS1-NBL1,RPS14P3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv159533 1 19827465 19827530 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178111 M 24 MINOS1,MINOS1-NBL1 esv2395760 1 19841881 19842314 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4876743 M 1 0 1 MINOS1-NBL1,NBL1 NA18507 esv7640 1 19841934 19842086 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30081 M 1 0 0 MINOS1-NBL1 nsv474503 1 19852422 19852422 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013748 M 9 1 0 MINOS1-NBL1,NBL1 NA18956 nsv545729 1 19856514 19865100 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711284 M 17421 0 1 HTR6,MINOS1-NBL1,NBL1 esv22015 1 19963063 19964549 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11329 M 40 0 1 TMCO4 NA18861 nsv1003518 1 19968875 20089447 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700850 M 29084 0 1 OTUD3,RNF186,TMCO4 esv3450715 1 19969010 19969244 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8699413 M 185 1 0 TMCO4 NA12878 nsv460717 1 20109318 20123386 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537249 M 1557 0 1 OTUD3,PLA2G2E NINDS_168 nsv545730 1 20109318 20123386 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173791 M 17421 0 1 OTUD3,PLA2G2E NINDS_168 esv3355181 1 20129670 20129688 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898733,essv8898732,essv8898730,essv8898738,essv8898735,essv8898731,essv8898737,essv8898741,essv8898734,essv8898740,essv8898739,essv8898729 M 185 12 0 "" NA06986,NA07357,NA11830,NA11881,NA12154,NA12249,NA12717,NA18571,NA18593,NA18603,NA18609,NA18948 esv2564092 1 20131192 20132300 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5284149 M 1 1 0 "" NA18507 nsv527818 1 20178474 20252732 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704313 M 2026 1 0 PLA2G2A nsv545731 1 20188186 20975386 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711285 M 17421 1 0 CAMK2N1,CDA,DDOST,FAM43B,HP1BP3,KIF17,LINC01141,MIR6084,MUL1,PINK1,PLA2G2C,PLA2G2D,PLA2G2F,PLA2G5,SH2D5,UBXN10,VWA5B1 nsv1003802 1 20257015 20353427 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700851 M 29084 0 1 PLA2G2D,PLA2G2F,PLA2G5 nsv5520 1 20270133 20315058 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5380 M 9 0 1 PLA2G2D,PLA2G5 NA19129 esv2435763 1 20278935 20283694 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5290042 M 1 0 1 PLA2G5 NA18507 esv2164449 1 20279549 20283386 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4803624 M 1 0 1 PLA2G5 NA18507 esv25446 1 20279685 20283259 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21099 M 40 0 3 PLA2G5 NA18517,NA19129,NA19190 nsv519515 1 20280768 20281961 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv693891,nssv674889,nssv656533,nssv689562 M 2026 0 4 PLA2G5 esv1003821 1 20303656 20315565 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564297 M 3 0 1 PLA2G2D HuRef nsv945810 1 20351722 20360956 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763200,nssv1755705,nssv1755450,nssv1755713,nssv1755662,nssv1755676,nssv1763198,nssv1755702,nssv1755664,nssv1755680,nssv1755668,nssv1755672,nssv1755438,nssv1755689,nssv1755443,nssv1755704,nssv1755436,nssv1755688,nssv1755439,nssv1763208,nssv1755437,nssv1755711,nssv1755656,nssv1755665,nssv1755446,nssv1755682,nssv1763203,nssv1755673,nssv1755669,nssv1755701,nssv1755657,nssv1755685,nssv1755448,nssv1755667,nssv1755661,nssv1755708,nssv1755719,nssv1755690,nssv1763199,nssv1755698,nssv1755659,nssv1763209,nssv1755717,nssv1755679,nssv1755442,nssv1763211,nssv1755660,nssv1755707,nssv1755444,nssv1763207,nssv1755447,nssv1755714,nssv1755440,nssv1755695,nssv1755720,nssv1763210,nssv1763201,nssv1755677,nssv1755445,nssv1755693,nssv1763202,nssv1755686,nssv1755441,nssv1763212,nssv1755671,nssv1755692,nssv1755449,nssv1755675,nssv1755718,nssv1755697,nssv1755658,nssv1755710,nssv1763205,nssv1755699,nssv1755670,nssv1763206,nssv1755706,nssv1755716,nssv1755696,nssv1755663,nssv1755700,nssv1755703,nssv1755712,nssv1755715,nssv1755691,nssv1755666,nssv1755709,nssv1755684,nssv1763204,nssv1755683,nssv1755681,nssv1763213,nssv1755678,nssv1755694,nssv1755687,nssv1755674,nssv1755435 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2606339 1 20369396 20370758 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5295790 M 1 0 1 PLA2G2C NA18507 esv2380061 1 20369588 20370508 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4621106 M 1 0 1 PLA2G2C NA18507 esv26523 1 20369816 20370376 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11635 M 40 0 1 PLA2G2C NA18858 esv26309 1 20371591 20373385 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10552 M 40 0 1 PLA2G2C NA18505 esv1000843 1 20414216 20418043 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565754 M 3 0 1 "" HuRef nsv1000821 1 20428616 20476601 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700853,nssv3700852 M 29084 0 2 "" dgv179n54 1 20428616 20478907 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545732,nsv545733 M 17421 0 2 "" nsv998806 1 20464927 20496599 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479431 M 29084 0 1 VWA5B1 nsv818100 1 20473599 20477546 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417739 M 112 0 1 "" NA19003 esv24128 1 20487218 20488654 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16821 M 40 1 0 "" NA11993 esv2762277 1 20503421 20508286 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007966 M 1109 0 1 VWA5B1 SW_0820 nsv5631 1 20537419 20580213 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3933,nssv5386 M 9 2 0 LINC01141,VWA5B1 NA12878,NA19129 esv2513498 1 20581164 20582087 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5214092 M 1 1 0 LINC01141 NA18507 esv3347293 1 20581252 20581950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692107 M 185 1 0 LINC01141 NA19240 esv3366225 1 20652752 20654450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692109 M 185 1 0 "" NA19238 dgv62e59 1 20652852 20654050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3325828,esv3444591 M 185 2 0 "" NA19239,NA19240 esv2560487 1 20662449 20662898 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5314979 M 1 1 0 "" NA18507 nsv512724 1 20662569 20662675 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625349 M 1 1 0 "" 1 nsv821943 1 20678598 20691234 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426380 M 31 1 0 CAMK2N1 AK6 esv3385515 1 20697513 20697513 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8638738 M 185 0 0 "" nsv945811 1 20725077 20726549 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763222,nssv1763250,nssv1763234,nssv1763276,nssv1763238,nssv1763301,nssv1763218,nssv1763254,nssv1763296,nssv1763253,nssv1763227,nssv1763214,nssv1763294,nssv1763307,nssv1763231,nssv1763273,nssv1763216,nssv1763287,nssv1763219,nssv1763288,nssv1763295,nssv1763261,nssv1763235,nssv1763248,nssv1763217,nssv1763268,nssv1763229,nssv1763259,nssv1763242,nssv1763281,nssv1763299,nssv1763251,nssv1763245,nssv1763289,nssv1763297,nssv1763246,nssv1763233,nssv1763252,nssv1763292,nssv1763308,nssv1763300,nssv1763240,nssv1763291,nssv1763265,nssv1763232,nssv1763304,nssv1763293,nssv1763255,nssv1763226,nssv1763275,nssv1763230,nssv1763284,nssv1763221,nssv1763274,nssv1763220,nssv1763237,nssv1763223,nssv1763262,nssv1763236,nssv1763249,nssv1763298,nssv1763290,nssv1763225,nssv1763244,nssv1763215,nssv1763277,nssv1763228,nssv1763279,nssv1763243,nssv1763278,nssv1763224,nssv1763241,nssv1763270,nssv1763263,nssv1763267,nssv1763256,nssv1763272,nssv1763269,nssv1763257,nssv1763285,nssv1763309,nssv1763271,nssv1763305,nssv1763239,nssv1763310,nssv1763266,nssv1763286,nssv1763260,nssv1763306,nssv1763283,nssv1763280,nssv1763264,nssv1763303,nssv1763302,nssv1763247,nssv1763282,nssv1763258 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv478723 1 20749734 20749734 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010858 M 9 1 0 "" NA18507 nsv460729 1 20766552 20791499 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537251 M 1557 1 0 CDA HGDP00552 nsv545734 1 20766552 20791499 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173792 M 17421 1 0 CDA HGDP00552 esv2750602 1 20786879 20787704 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95034 M 51 0 1 "" 22231 nsv528156 1 20788288 20807383 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704704 M 2026 0 1 CDA esv998962 1 20797976 20803754 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565384 M 3 0 1 CDA HuRef nsv511682 1 20804213 20805394 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626320 M 1 0 1 CDA 1 esv24339 1 20805104 20806231 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19697 M 40 0 1 CDA NA18517 nsv834369 1 20808850 20978917 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443896,nssv1443885 M 95 0 2 CDA,DDOST,HP1BP3,KIF17,MIR6084,PINK1,SH2D5 esv3371341 1 20817315 20817334 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593713,essv9593724,essv9593746,essv9593735 M 185 4 0 CDA NA11881,NA12287,NA12814,NA12815 esv3305877 1 20817324 20817325 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768893,essv7765711,essv7767205,essv7766435,essv7766905,essv7769259 M 185 6 0 CDA NA11881,NA11931,NA12045,NA12287,NA12814,NA12815 esv3359351 1 20822464 20823919 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652061 M 185 1 0 "" NA19240 esv2633764 1 20822484 20822872 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5230908 M 1 1 0 "" NA18507 esv2499678 1 20824410 20826003 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5192304 M 1 0 1 "" NA18507 esv3920 1 20824849 20825365 CNV loss Wang_et_al_2008 18987735 Sequencing essv26361 M 1 0 1 "" YH esv1075995 1 20825075 20825255 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3629701 M 2 0 1 "" HuRef nsv1003348 1 20848050 20914142 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469110 M 29084 1 0 DDOST,KIF17,PINK1 nsv522796 1 20867539 20875313 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698440 M 2026 0 1 KIF17 nsv520013 1 20883769 20927313 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697177 M 2026 0 1 KIF17,SH2D5 nsv5742 1 20957474 20992598 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3942 M 9 1 0 HP1BP3 NA12878 esv1356855 1 21015136 21015578 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3611504 M 2 0 1 EIF4G3 HuRef nsv474786 1 21056243 21056243 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019071 M 9 1 0 EIF4G3 NA19240 nsv1012238 1 21171950 21239344 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700854 M 29084 0 1 EIF4G3 nsv1009855 1 21186431 21266804 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700855 M 29084 0 1 EIF4G3 esv3387129 1 21199675 21199683 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863680 M 185 1 0 EIF4G3 NA12005 nsv834380 1 21271857 21447028 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443907 M 95 1 0 ECE1,EIF4G3 nsv160811 1 21300656 21303960 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179389 M 24 EIF4G3 esv1007787 1 21357379 21359034 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565532 M 3 1 0 EIF4G3 HuRef esv1000397 1 21393754 21412491 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565165 M 3 0 0 "" HuRef esv1387368 1 21409684 21410106 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3804670 M 2 0 1 "" HuRef nsv545735 1 21414322 21420655 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711288 M 17421 0 1 ECE1 esv1006358 1 21446403 21458931 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564803 M 3 0 1 ECE1 HuRef esv2109865 1 21499905 21500323 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4765838 M 1 0 1 ECE1 NA18507 nsv515620 1 21529749 21529826 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv664134,nssv656270 M 2026 0 2 ECE1 esv23912 1 21531415 21532035 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14361 M 40 0 1 ECE1 NA19225 nsv1007102 1 21564472 21608914 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474977 M 29084 0 1 "" esv34155 1 21566164 22039203 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990706 M 270 0 0 ALPL,HSPG2,LDLRAD2,NBPF3,RAP1GAP,USP48 esv26055 1 21570077 21687749 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14172,esv14152,esv11019 M 40 8 0 NBPF3 NA15510,NA18502,NA18511,NA18523,NA18907,NA18909,NA18916,NA19225 nsv1012251 1 21584318 21651083 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700856 M 29084 1 0 NBPF3 nsv945812 1 21598281 21630669 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763323,nssv1763382,nssv1763393,nssv1763350,nssv1763332,nssv1763406,nssv1763315,nssv1763336,nssv1763328,nssv1763357,nssv1763325,nssv1763361,nssv1763316,nssv1763398,nssv1763391,nssv1763403,nssv1763319,nssv1763367,nssv1763324,nssv1763404,nssv1763322,nssv1763372,nssv1763392,nssv1763341,nssv1763326,nssv1763347,nssv1763321,nssv1763373,nssv1763330,nssv1763363,nssv1763397,nssv1763334,nssv1763317,nssv1763407,nssv1763389,nssv1763383,nssv1763327,nssv1763380,nssv1763340,nssv1763402,nssv1763320,nssv1763351,nssv1763335,nssv1763399,nssv1763390,nssv1763344,nssv1763396,nssv1763370,nssv1763394,nssv1763378,nssv1763331,nssv1763311,nssv1763333,nssv1763365,nssv1763313,nssv1763385,nssv1763388,nssv1763387,nssv1763329,nssv1763348,nssv1763395,nssv1763355,nssv1763339,nssv1763358,nssv1763342,nssv1763343,nssv1763318,nssv1763356,nssv1763312,nssv1763362,nssv1763314,nssv1763345,nssv1763377,nssv1763368,nssv1763338,nssv1763386,nssv1763379,nssv1763352,nssv1763349,nssv1763371,nssv1763384,nssv1763381,nssv1763369,nssv1763337,nssv1763376,nssv1763375,nssv1763346,nssv1763354,nssv1763400,nssv1763353,nssv1763374,nssv1763366,nssv1763405,nssv1763364,nssv1763359,nssv1763360,nssv1763401 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv820559 1 21608059 21687749 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420269 M 1 1 0 NBPF3 NA10851 esv2758926 1 21608771 21815001 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757726 M 270 1 1 ALPL,NBPF3,RAP1GAP NA19154,NA19173 nsv428432 1 21608771 21815001 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv454587,nssv454598,nssv454620,nssv454609,nssv454554,nssv454565,nssv454576 M 62 7 0 ALPL,NBPF3,RAP1GAP HGDP00460,HGDP00463,HGDP00472,HGDP01093,HGDP01094,NA18916,NA19096 nsv9435 1 21610330 21672782 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv15120,nssv14412,nssv16109 M 31 2 1 NBPF3 NA18502,NA19173,NA19221 esv3402744 1 21621752 21626450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692122 M 185 1 0 "" NA19238 nsv945574 1 21623966 21630669 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570573,nssv2570604,nssv2570580,nssv2570628,nssv2570641,nssv2570602,nssv2571161,nssv2570615,nssv2570645,nssv2570638,nssv2570598,nssv2570619,nssv2570646,nssv2570595,nssv2571165,nssv2570600,nssv2570592,nssv2570630,nssv2571166,nssv2570627,nssv2570578,nssv2570626,nssv2570571,nssv2571162,nssv2570649,nssv2570605,nssv2570574,nssv2570611,nssv2570644,nssv2570639,nssv2570588,nssv2570624,nssv2570647,nssv2571158,nssv2570601,nssv2570609,nssv2570590,nssv2570637,nssv2570576,nssv2570625,nssv2570585,nssv2570612,nssv2570572,nssv2570616,nssv2570589,nssv2570603,nssv2570586,nssv2570613,nssv2570584,nssv2570568,nssv2570579,nssv2570633,nssv2570587,nssv2570596,nssv2570599,nssv2570569,nssv2570594,nssv2570635,nssv2570648,nssv2570606,nssv2570591,nssv2570597,nssv2570575,nssv2570620,nssv2570583,nssv2570593,nssv2570642,nssv2571164,nssv2570582,nssv2570634,nssv2570577,nssv2570607,nssv2570640,nssv2570631,nssv2570643,nssv2570623,nssv2570581,nssv2570570,nssv2570632,nssv2570608,nssv2570629,nssv2570617,nssv2571159,nssv2570622,nssv2571163,nssv2570610,nssv2570621,nssv2571167,nssv2570650,nssv2570618,nssv2570614,nssv2570636 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv7069 1 21626890 21679151 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29510 M 1 0 0 NBPF3 nsv945813 1 21639954 21685166 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763410,nssv1763474,nssv1763411,nssv1763456,nssv1763432,nssv1763452,nssv1763485,nssv1763479,nssv1763418,nssv1763441,nssv1763425,nssv1763450,nssv1763428,nssv1763478,nssv1763413,nssv1763457,nssv1763490,nssv1763444,nssv1763421,nssv1763484,nssv1763437,nssv1763458,nssv1763427,nssv1763454,nssv1763423,nssv1763435,nssv1763420,nssv1763476,nssv1763412,nssv1763465,nssv1763422,nssv1763464,nssv1763486,nssv1763431,nssv1763429,nssv1763433,nssv1763487,nssv1763475,nssv1763424,nssv1763438,nssv1763488,nssv1763469,nssv1763491,nssv1764113,nssv1763419,nssv1763480,nssv1763489,nssv1764112,nssv1763426,nssv1763467,nssv1764110,nssv1763460,nssv1763416,nssv1763455,nssv1763430,nssv1764111,nssv1763436,nssv1763440,nssv1764109,nssv1763477,nssv1763414,nssv1764117,nssv1764108,nssv1763453,nssv1763415,nssv1764120,nssv1763409,nssv1764118,nssv1763439,nssv1764116,nssv1763417,nssv1763408,nssv1763447,nssv1763482,nssv1764114,nssv1763448,nssv1763462,nssv1764119,nssv1763459,nssv1763481,nssv1763434,nssv1763483,nssv1763446,nssv1764115,nssv1763445,nssv1763473,nssv1763442,nssv1763468,nssv1763451,nssv1763472,nssv1763471,nssv1763466,nssv1763443,nssv1763449,nssv1763470,nssv1763463,nssv1763461 M 97 10 0 NBPF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv989724 1 21659005 21659276 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569889 M 3 0 1 NBPF3 HuRef esv2456631 1 21659007 21659278 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5375893 M 1 0 1 NBPF3 NA18507 esv1311289 1 21659007 21659279 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4347116 M 2 0 1 NBPF3 HuRef esv2195718 1 21660138 21660586 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4650166 M 1 0 1 NBPF3 NA18507 esv1213372 1 21660332 21660396 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3769496 M 2 0 1 NBPF3 HuRef nsv160214 1 21660333 21660396 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178792 M 24 NBPF3 esv3350627 1 21660652 21667250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692123 M 185 1 0 NBPF3 NA19239 nsv945575 1 21678754 21679494 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570658,nssv2570656,nssv2570653,nssv2570655,nssv2570657,nssv2570654,nssv2570660,nssv2570661,nssv2570652,nssv2570651,nssv2570662,nssv2570659 M 97 10 0 NBPF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945576 1 21679494 21681770 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570752,nssv2570702,nssv2570682,nssv2570724,nssv2570693,nssv2570733,nssv2570684,nssv2570719,nssv2570746,nssv2570732,nssv2570750,nssv2570725,nssv2570687,nssv2570721,nssv2570697,nssv2570742,nssv2570670,nssv2570667,nssv2570691,nssv2570711,nssv2570677,nssv2570730,nssv2570666,nssv2570744,nssv2570679,nssv2570739,nssv2570695,nssv2570741,nssv2570696,nssv2570735,nssv2570751,nssv2570736,nssv2570748,nssv2570674,nssv2570673,nssv2570716,nssv2570690,nssv2570717,nssv2570745,nssv2570737,nssv2570703,nssv2570714,nssv2570671,nssv2570734,nssv2570680,nssv2570672,nssv2570686,nssv2570675,nssv2570688,nssv2570743,nssv2570753,nssv2570700,nssv2570681,nssv2570726,nssv2570749,nssv2570707,nssv2570747,nssv2570713,nssv2570685,nssv2570701,nssv2570694,nssv2570727,nssv2570699,nssv2570728,nssv2570706,nssv2570729,nssv2570676,nssv2570740,nssv2570683,nssv2570731,nssv2570678,nssv2570738,nssv2570692,nssv2570710,nssv2570704,nssv2570668,nssv2570689,nssv2570722,nssv2570754,nssv2570709,nssv2570669,nssv2570718,nssv2570663,nssv2570723,nssv2570720,nssv2570665,nssv2570715,nssv2570698,nssv2570708,nssv2570664,nssv2570705,nssv2570712 M 97 10 0 NBPF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv527108 1 21695879 21699153 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703488 M 2026 0 1 "" nsv834391 1 21722520 21923069 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443929,nssv1443951,nssv1443940,nssv1443918,nssv1443963 M 95 0 5 ALPL,RAP1GAP,USP48 esv1457635 1 21726126 21726126 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3639911 M 2 1 0 ALPL HuRef nsv517096 1 21736278 21869435 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv683155,nssv667702,nssv695226,nssv678465,nssv658962,nssv674624,nssv652854,nssv682220,nssv667278,nssv679211,nssv657650,nssv682311,nssv671036,nssv699191,nssv653597,nssv674071,nssv651804,nssv705217,nssv661510,nssv676837,nssv678892 M 2026 0 21 ALPL,RAP1GAP nsv460740 1 21762093 21772078 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537258 M 1557 0 1 ALPL NINDS_181 nsv545736 1 21762093 21772078 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173793 M 17421 0 1 ALPL NINDS_181 nsv998678 1 21763830 21813610 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479306 M 29084 1 0 ALPL,RAP1GAP nsv477018 1 21765193 21765193 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020352 M 9 1 0 ALPL NA12878 nsv508359 1 21777461 21853278 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622758 M 4 0 1 ALPL,RAP1GAP NA18994 nsv509002 1 21777461 21853278 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619779 M 4 1 0 ALPL,RAP1GAP NA10860 nsv470704 1 21789821 21810961 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547717 M 443 1 0 RAP1GAP HGDP00599 esv1002267 1 21807902 21817453 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564498 M 3 0 1 RAP1GAP HuRef esv3892747 1 21826023 21842876 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780387 M 3017 0 1 RAP1GAP nsv475097 1 21828184 21828184 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019566 M 9 1 0 RAP1GAP NA19240 nsv460751 1 21831123 21861209 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537263 M 1557 0 1 RAP1GAP 1780854065_A nsv545737 1 21831123 21861209 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173794 M 17421 0 1 RAP1GAP 1780854065_A nsv5854 1 21875736 21910696 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3954 M 9 1 0 USP48 NA12878 nsv1008548 1 21893732 21940846 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478122 M 29084 0 1 USP48 nsv999475 1 21908447 21961428 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480239 M 29084 0 1 USP48 nsv5965 1 21913545 21944069 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6413 M 9 1 0 USP48 NA12156 nsv508470 1 21915252 22003696 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622759 M 4 0 1 USP48 NA18994 nsv545738 1 21998916 22030950 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711289 M 17421 0 1 HSPG2,LDLRAD2 nsv515659 1 21998916 22137880 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv663807,nssv687314,nssv695098,nssv669785,nssv669540,nssv705427,nssv664272,nssv705759,nssv704109 M 2026 0 9 HSPG2,LDLRAD2 nsv9546 1 22001165 22010558 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17753 M 31 1 0 "" NA18972 nsv509013 1 22003696 22174188 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621086 M 4 1 0 HSPG2,LDLRAD2 NA15510 esv33753 1 22004531 22009931 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93649 M 51 0 1 "" 21972 nsv834402 1 22007819 22195709 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443985,nssv1443996,nssv1443974 M 95 0 3 CELA3B,HSPG2,LDLRAD2 esv33407 1 22011685 22011805 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv95849,essv97380,essv99600,essv99343,essv97131,essv95073,essv97064,essv94051,essv94942,essv100572,essv94306 M 51 11 0 LDLRAD2 21721,21802,21808,21817,21879,21911,22075,22217,22231,22275,22298 nsv460762 1 22014570 22057139 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537273 M 1557 0 1 HSPG2,LDLRAD2 NINDS_70 dgv180n54 1 22014570 22063520 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545739,nsv545740 M 17421 0 2 HSPG2,LDLRAD2 NINDS_70 nsv469549 1 22014652 22219090 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1674276,nssv1675868,nssv1675099 M 265 0 3 CELA3A,CELA3B,HSPG2,LDLRAD2 esv1196174 1 22017235 22017370 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3606269 M 2 0 1 LDLRAD2 HuRef nsv470706 1 22019664 22200865 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547718,nssv547719 M 443 0 2 CELA3A,CELA3B,HSPG2,LDLRAD2 HGDP00546,HGDP00550 nsv545741 1 22022522 22038488 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711291 M 17421 1 0 HSPG2,LDLRAD2 nsv460784 1 22057139 22088866 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537294 M 1557 0 1 HSPG2 HGDP00857 nsv545742 1 22057139 22088866 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173796 M 17421 0 1 HSPG2 HGDP00857 esv1003020 1 22063120 22084921 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564134 M 3 0 1 HSPG2 HuRef nsv545743 1 22071762 22079529 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711292 M 17421 0 1 HSPG2 esv2758927 1 22095108 22285444 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757727 M 270 0 1 CDC42,CELA3A,CELA3B,HSPG2,LINC00339 NA12057 nsv945815 1 22106159 22109092 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764187,nssv1764204,nssv1764196,nssv1764124,nssv1764208,nssv1764198,nssv1764148,nssv1764127,nssv1764156,nssv1764202,nssv1764178,nssv1764129,nssv1764158,nssv1764138,nssv1764168,nssv1764126,nssv1764212,nssv1764145,nssv1764189,nssv1764142,nssv1764146,nssv1764149,nssv1764161,nssv1764135,nssv1764195,nssv1764140,nssv1764173,nssv1764150,nssv1764153,nssv1764136,nssv1764190,nssv1764137,nssv1764209,nssv1764133,nssv1764166,nssv1764128,nssv1764121,nssv1764199,nssv1764171,nssv1764139,nssv1764194,nssv1764134,nssv1764177,nssv1764132,nssv1764188,nssv1764125,nssv1764182,nssv1764207,nssv1764186,nssv1764203,nssv1764213,nssv1764123,nssv1764174,nssv1764143,nssv1764157,nssv1764205,nssv1764184,nssv1764200,nssv1764179,nssv1764206,nssv1764164,nssv1764201,nssv1764175,nssv1764141,nssv1764170,nssv1764152,nssv1764165,nssv1764130,nssv1764147,nssv1764131,nssv1764167,nssv1764122,nssv1764155,nssv1764191,nssv1764185,nssv1764181,nssv1764159,nssv1764210,nssv1764180,nssv1764197,nssv1764172,nssv1764215,nssv1764160,nssv1764217,nssv1764211,nssv1764162,nssv1764192,nssv1764163,nssv1764193,nssv1764216,nssv1764169,nssv1764214,nssv1764183,nssv1764154,nssv1764144,nssv1764151,nssv1764176 M 97 10 0 HSPG2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv834413 1 22107800 22292761 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444029,nssv1444007,nssv1444040,nssv1444018 M 95 0 4 CDC42,CELA3A,CELA3B,HSPG2,LINC00339 nsv460795 1 22122176 22157082 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537305 M 1557 0 1 HSPG2 NINDS_74 nsv545744 1 22122176 22157082 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173797 M 17421 0 1 HSPG2 NINDS_74 esv1468707 1 22158993 22159043 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3697282 M 2 0 1 "" HuRef nsv945816 1 22165536 22209303 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764301,nssv1764248,nssv1764229,nssv1764289,nssv1764295,nssv1764261,nssv1764300,nssv1764270,nssv1764304,nssv1764269,nssv1764242,nssv1764280,nssv1764235,nssv1764273,nssv1764298,nssv1764278,nssv1764223,nssv1764259,nssv1764224,nssv1764241,nssv1764303,nssv1764290,nssv1764225,nssv1764260,nssv1764219,nssv1764284,nssv1764232,nssv1764311,nssv1764230,nssv1764293,nssv1764239,nssv1764309,nssv1764237,nssv1764294,nssv1764238,nssv1764268,nssv1764227,nssv1764266,nssv1764249,nssv1764306,nssv1764221,nssv1764250,nssv1764228,nssv1764267,nssv1764220,nssv1764292,nssv1764234,nssv1764275,nssv1764299,nssv1764265,nssv1764236,nssv1764258,nssv1764231,nssv1764305,nssv1764297,nssv1764243,nssv1764296,nssv1764253,nssv1764226,nssv1764310,nssv1764246,nssv1764274,nssv1764247,nssv1764279,nssv1764222,nssv1764308,nssv1764240,nssv1764218,nssv1764302,nssv1764285,nssv1764233,nssv1764251,nssv1764272,nssv1764263,nssv1764276,nssv1764313,nssv1764291,nssv1764287,nssv1764245,nssv1764262,nssv1764283,nssv1764255,nssv1764271,nssv1764257,nssv1764277,nssv1764254,nssv1764288,nssv1764286,nssv1764312,nssv1764314,nssv1764252,nssv1764282,nssv1764281,nssv1764264,nssv1764244,nssv1764307,nssv1764256 M 97 10 0 CELA3A,CELA3B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3892859 1 22165643 22200866 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25800641,essv25781066,essv25786412,essv25786265 M 3017 0 4 CELA3A,CELA3B esv24116 1 22166472 22214926 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12969,esv9848 M 40 0 3 CELA3A,CELA3B NA18861,NA18907,NA19257 esv3892970 1 22168894 22181394 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796539 M 3017 0 1 CELA3B nsv436921 1 22172760 22190556 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465918 M 2 1 0 CELA3B NA18505 esv7729 1 22180202 22205018 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30170 M 1 0 0 CELA3A,CELA3B nsv9657 1 22182113 22215918 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv12446,nssv18083 M 31 0 2 CELA3A,CELA3B NA18972,NA19007 esv2760299 1 22182461 22210712 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7008299,essv7008522,essv7008410,essv7008077,essv7008188,essv7008633 M 1109 0 6 CELA3A,CELA3B SW_0086,SW_0148,SW_0285,SW_0883,SW_1031,SW_1125 esv2764236 1 22182461 22230852 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005204,essv7005185,essv7005196,essv7005194,essv7005193,essv7005200,essv7005191,essv7005195,essv7005199,essv7005198,essv7005187,essv7005184,essv7005197,essv7005183,essv7005192,essv7005186,essv7005203,essv7005202 M 1109 2 16 CELA3A,CELA3B,LINC00339 RW_0020,RW_0028,RW_0071,RW_0084,RW_0088,RW_0129,RW_0147,RW_0148,RW_0180,RW_0197,RW_0331,RW_0505,RW_0558,RW_0575,RW_0577,RW_0605,RW_0621,RW_0666 dgv27n67 1 22188645 22216691 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv821954,nsv821965 M 31 0 2 CELA3A NA18570,NA18972 nsv441686 1 22193098 22209830 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656604,nssv1656606,nssv1656611,nssv1656605,nssv1656608,nssv1656609,nssv1656600,nssv1656610,nssv1656617,nssv1656612,nssv1656615,nssv1656620,nssv1656601,nssv1656613,nssv1656614,nssv1656621,nssv1656603,nssv1656607,nssv1656602,nssv1656616,nssv1656618,nssv1656619 M 270 0 22 CELA3A NA12057,NA18522,NA18529,NA18545,NA18570,NA18861,NA18863,NA18948,NA18949,NA18970,NA18972,NA18981,NA18991,NA18994,NA19003,NA19005,NA19007,NA19012,NA19153,NA19154,NA19171,NA19206 esv2422105 1 22193102 22203126 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5122038,essv5092401,essv5139034,essv5093683,essv5062103,essv5079757,essv5116678,essv5112361,essv5160488,essv5026382,essv5012250,essv5160939,essv5114201,essv5057648,essv5087741,essv5099755,essv5004304,essv5048628,essv5014076,essv5009703,essv5072556,essv5013849,essv5120929,essv5068701,essv5005963,essv5099187,essv5047107,essv5010298,essv5136010,essv5027369,essv5151805,essv5060599,essv5048433,essv5030225,essv5092266,essv5066006,essv5039091,essv5086958,essv5090968,essv5126066,essv5089636,essv5139157,essv5155528,essv5101041,essv5131129,essv5087547,essv5109676,essv5052234,essv5073331,essv5140524,essv5082060,essv5040804,essv5060991,essv5137057,essv5012703,essv5025821,essv5098330,essv5048896,essv5130100,essv5029182,essv5052611,essv5160782,essv5010859,essv5035309,essv5039080,essv5152666,essv5089331,essv5122800,essv5092467,essv5153959,essv5057717,essv5098002,essv5047066,essv5051602,essv5079332,essv5117747,essv5156755,essv5097180,essv5048403,essv5082807,essv5040269,essv5106182,essv5122426,essv5051720,essv5127647,essv5031926,essv5069364,essv5150276,essv5049931,essv5107178,essv5008724,essv5127796,essv5013797,essv5144788,essv5079181,essv5069649,essv5067557,essv5007855,essv5021959,essv5135997,essv5013711,essv5004960,essv5118566,essv5094720 M 1184 0 104 CELA3A NA06986,NA10852,NA12057,NA17970,NA17976,NA17979,NA17998,NA18108,NA18109,NA18135,NA18146,NA18147,NA18161,NA18498,NA18529,NA18545,NA18570,NA18615,NA18616,NA18617,NA18628,NA18645,NA18647,NA18861,NA18863,NA18910,NA18911,NA18923,NA18925,NA18948,NA18949,NA18970,NA18972,NA18977,NA18979,NA18981,NA18991,NA18994,NA19005,NA19007,NA19070,NA19085,NA19086,NA19153,NA19154,NA19171,NA19184,NA19186,NA19248,NA19249,NA19257,NA19258,NA19313,NA19315,NA19317,NA19319,NA19334,NA19372,NA19396,NA19397,NA19440,NA19445,NA19446,NA19452,NA19457,NA19462,NA19467,NA19473,NA19750,NA19834,NA20126,NA20128,NA20282,NA20284,NA20333,NA20334,NA20335,NA20336,NA20540,NA20544,NA20774,NA20806,NA20818,NA20891,NA20900,NA20909,NA20910,NA21107,NA21295,NA21333,NA21378,NA21390,NA21424,NA21473,NA21520,NA21597,NA21599,NA21601,NA21613,NA21614,NA21717,NA21733,NA21739,NA21776 nsv528664 1 22200866 22261914 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705302 M 2026 1 0 CDC42,CELA3A,LINC00339 nsv545745 1 22217680 22262659 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711293 M 17421 0 1 CDC42,LINC00339 nsv545746 1 22259809 22263284 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711294 M 17421 0 1 CDC42 nsv945817 1 22277190 22277858 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764326,nssv1763849,nssv1764330,nssv1763865,nssv1763832,nssv1763876,nssv1763895,nssv1763884,nssv1763829,nssv1763860,nssv1764319,nssv1763870,nssv1764325,nssv1763846,nssv1764320,nssv1763901,nssv1763833,nssv1763883,nssv1763843,nssv1763888,nssv1763831,nssv1763838,nssv1764323,nssv1763904,nssv1764317,nssv1763853,nssv1764329,nssv1763907,nssv1764324,nssv1763869,nssv1763898,nssv1763881,nssv1764316,nssv1763880,nssv1763890,nssv1763855,nssv1763828,nssv1763864,nssv1764322,nssv1763842,nssv1764318,nssv1763871,nssv1763830,nssv1763835,nssv1764327,nssv1763908,nssv1763889,nssv1763837,nssv1763836,nssv1763854,nssv1763894,nssv1763859,nssv1763840,nssv1763861,nssv1764328,nssv1763847,nssv1764321,nssv1763886,nssv1763834,nssv1763905,nssv1763896,nssv1763903,nssv1763891,nssv1763878,nssv1763892,nssv1763850,nssv1763893,nssv1764315,nssv1763841,nssv1763844,nssv1763897,nssv1763862,nssv1763887,nssv1763875,nssv1763885,nssv1763858,nssv1763867,nssv1763866,nssv1763863,nssv1763882,nssv1763879,nssv1763906,nssv1763851,nssv1763868,nssv1763845,nssv1763899,nssv1763873,nssv1763902,nssv1763839,nssv1763856,nssv1763900,nssv1763852,nssv1763874,nssv1763848,nssv1763872,nssv1763877,nssv1763857 M 97 10 0 CDC42 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945818 1 22285358 22286470 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763940,nssv1763932,nssv1763924,nssv1763965,nssv1763923,nssv1763951,nssv1763938,nssv1763946,nssv1763994,nssv1763970,nssv1763929,nssv1763945,nssv1763914,nssv1763979,nssv1763920,nssv1763976,nssv1763995,nssv1763967,nssv1763915,nssv1763955,nssv1763930,nssv1763947,nssv1763921,nssv1763973,nssv1763928,nssv1763969,nssv1763913,nssv1763948,nssv1763925,nssv1763943,nssv1763922,nssv1763972,nssv1763992,nssv1763971,nssv1763918,nssv1763974,nssv1763987,nssv1763954,nssv1763912,nssv1764003,nssv1763927,nssv1763980,nssv1763989,nssv1763935,nssv1763937,nssv1763998,nssv1763919,nssv1763942,nssv1763991,nssv1763962,nssv1763988,nssv1764001,nssv1763990,nssv1764004,nssv1763931,nssv1763957,nssv1763916,nssv1763999,nssv1763933,nssv1763966,nssv1763993,nssv1763952,nssv1763911,nssv1763996,nssv1763917,nssv1763950,nssv1763986,nssv1763968,nssv1763926,nssv1763997,nssv1763910,nssv1764005,nssv1763958,nssv1763981,nssv1763949,nssv1763964,nssv1763944,nssv1764002,nssv1763961,nssv1764000,nssv1763959,nssv1763956,nssv1763985,nssv1763939,nssv1763934,nssv1763975,nssv1763909,nssv1763978,nssv1763983,nssv1763941,nssv1763984,nssv1763963,nssv1763953,nssv1763977,nssv1763936,nssv1763982,nssv1763960 M 97 10 0 CDC42 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv6076 1 22288886 22322991 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2871 M 9 1 0 CDC42,WNT4 NA18555 nsv945819 1 22290163 22291873 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764014,nssv1764082,nssv1764089,nssv1764093,nssv1764085,nssv1764096,nssv1764015,nssv1764079,nssv1764092,nssv1764006,nssv1764013,nssv1764069,nssv1764021,nssv1764075,nssv1764087,nssv1764051,nssv1764018,nssv1764073,nssv1764016,nssv1764052,nssv1764008,nssv1764062,nssv1764030,nssv1764043,nssv1764023,nssv1764067,nssv1764012,nssv1764042,nssv1764011,nssv1764077,nssv1764026,nssv1764033,nssv1764020,nssv1764060,nssv1764017,nssv1764076,nssv1764027,nssv1764071,nssv1764025,nssv1764064,nssv1764091,nssv1764050,nssv1764010,nssv1764057,nssv1764022,nssv1764044,nssv1764019,nssv1764045,nssv1764088,nssv1764098,nssv1764024,nssv1764095,nssv1764037,nssv1764070,nssv1764034,nssv1764074,nssv1764084,nssv1764099,nssv1764009,nssv1764066,nssv1764035,nssv1764039,nssv1764083,nssv1764040,nssv1764028,nssv1764048,nssv1764086,nssv1764047,nssv1764090,nssv1764038,nssv1764007,nssv1764054,nssv1764065,nssv1764059,nssv1764100,nssv1764063,nssv1764102,nssv1764068,nssv1764032,nssv1764078,nssv1764046,nssv1764049,nssv1764029,nssv1764101,nssv1764055,nssv1764097,nssv1764058,nssv1764061,nssv1764036,nssv1764053,nssv1764072,nssv1764031,nssv1764080,nssv1764094,nssv1764041,nssv1764056,nssv1764081 M 97 10 0 CDC42 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv460806 1 22324432 22385434 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537310 M 1557 0 1 WNT4 1780862415_A nsv545747 1 22324432 22385434 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173798 M 17421 0 1 WNT4 1780862415_A esv2762135 1 22360087 22367431 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005205 M 1109 0 1 "" RW_0118 nsv517086 1 22372117 22385434 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv663876,nssv669739,nssv677352,nssv671842,nssv663458,nssv664643,nssv679575,nssv671692,nssv684635,nssv665257,nssv666144,nssv656347,nssv653181,nssv682668,nssv664021,nssv683851,nssv676101,nssv687280,nssv682790,nssv653762,nssv661058 M 2026 0 21 "" esv2421859 1 22372815 22381838 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5026109,essv5062450,essv5095704,essv5007542,essv5054217,essv5112577,essv5138053,essv5119150,essv5016642,essv5060034,essv5054726,essv5117300,essv5043047,essv5006220,essv5142667,essv5046500,essv5114057,essv5095750,essv5147501,essv5155133,essv5009562,essv5025384,essv5102934,essv5143680,essv5106782,essv5081713,essv5023611,essv5066431,essv5063248,essv5139059 M 1184 0 30 "" NA18497,NA18855,NA18857,NA18868,NA18869,NA18933,NA18935,NA19107,NA19109,NA19113,NA19122,NA19247,NA19249,NA19379,NA19438,NA19451,NA19466,NA19713,NA19983,NA20336,NA20337,NA20341,NA20342,NA20348,NA21360,NA21361,NA21400,NA21401,NA21587,NA21650 esv2764193 1 22374303 22381793 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005213,essv7005215,essv7005222,essv7005218,essv7005207,essv7005224,essv7005220,essv7005206,essv7005217,essv7005214,essv7005216,essv7005227,essv7005211,essv7005228,essv7005226,essv7005225,essv7005229,essv7005219,essv7005209,essv7005221,essv7005208,essv7005210 M 1109 0 22 "" RW_0001,RW_0069,RW_0078,RW_0093,RW_0107,RW_0114,RW_0120,RW_0145,RW_0152,RW_0200,RW_0228,RW_0231,RW_0258,RW_0266,RW_0323,RW_0527,RW_0559,RW_0587,RW_0601,RW_0616,RW_0653,RW_0665 esv2585230 1 22398305 22399741 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282711 M 1 0 1 "" NA18507 nsv522370 1 22428580 22464043 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695150 M 2026 0 1 "" nsv516575 1 22461580 22470644 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv674738,nssv669268 M 2026 0 2 "" nsv522775 1 22472660 22472754 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698416 M 2026 0 1 "" nsv159512 1 22472667 22481250 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178090 M 24 "" nsv528939 1 22472754 22480144 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705630 M 2026 0 1 "" dgv131n100 1 22485277 22678479 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014969,nsv1002972 M 29084 2 0 ZBTB40 nsv945820 1 22519853 22523206 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765045,nssv1765074,nssv1765055,nssv1765082,nssv1764105,nssv1765092,nssv1765110,nssv1765067,nssv1765051,nssv1765102,nssv1765038,nssv1765061,nssv1765058,nssv1765089,nssv1765035,nssv1765097,nssv1765041,nssv1765101,nssv1765044,nssv1765084,nssv1765106,nssv1765065,nssv1765039,nssv1765076,nssv1765040,nssv1765078,nssv1765047,nssv1765062,nssv1765032,nssv1765052,nssv1765112,nssv1765072,nssv1765109,nssv1765094,nssv1765042,nssv1764103,nssv1765113,nssv1765096,nssv1765048,nssv1765059,nssv1765046,nssv1765123,nssv1765107,nssv1765077,nssv1765033,nssv1765075,nssv1764106,nssv1765050,nssv1765043,nssv1765071,nssv1765037,nssv1765099,nssv1765104,nssv1765068,nssv1764107,nssv1765091,nssv1765036,nssv1765085,nssv1765105,nssv1765083,nssv1765108,nssv1765079,nssv1765056,nssv1765087,nssv1765034,nssv1765054,nssv1765049,nssv1765120,nssv1765111,nssv1765064,nssv1764104,nssv1765122,nssv1765118,nssv1765080,nssv1765073,nssv1765093,nssv1765090,nssv1765114,nssv1765060,nssv1765081,nssv1765088,nssv1765116,nssv1765063,nssv1765070,nssv1765053,nssv1765115,nssv1765103,nssv1765086,nssv1765121,nssv1765057,nssv1765119,nssv1765117,nssv1765098,nssv1765100,nssv1765066,nssv1765095,nssv1765069 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv520015 1 22547808 22555617 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697178 M 2026 0 1 "" nsv159392 1 22552144 22552282 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177970 M 24 "" nsv545748 1 22583965 22615572 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711295 M 17421 0 1 "" nsv6187 1 22588151 22608508 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3965 M 9 0 1 "" NA12878 nsv472291 1 22593413 22593413 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020184 M 9 1 0 "" NA18555 esv3401180 1 22654844 22654844 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701365 M 185 1 0 ZBTB40 NA12878 nsv6298 1 22705095 22750151 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8765 M 9 0 1 ZBTB40 NA12156 nsv506921 1 22707136 22713136 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619226,nssv623263,nssv620646 M 4 0 0 ZBTB40 NA10860,NA15510,NA18994 nsv819803 1 22728268 22728572 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418549 M 2 1 0 ZBTB40 AK1 nsv509024 1 22736070 22780823 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619780 M 4 1 0 EPHA8 NA10860 nsv480045 1 22738875 22738875 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017056 M 9 0 0 "" nsv545749 1 22750400 22824973 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711297,nssv711296 M 17421 0 2 EPHA8 nsv545750 1 22758353 22763508 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711298 M 17421 0 1 EPHA8 esv27002 1 22759112 22760850 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17180 M 40 0 1 "" NA18858 esv26050 1 22761762 22763766 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12203,esv13267 M 40 3 0 EPHA8 NA06985,NA12044,NA18861 dgv181n54 1 22761790 22763656 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545752,nsv545751 M 17421 0 2 EPHA8 nsv545753 1 22762059 22763242 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711301 M 17421 0 1 EPHA8 dgv182n54 1 22762436 22763553 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545755,nsv545756,nsv545757 M 17421 4 0 EPHA8 dgv183n54 1 22762436 22763656 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545754,nsv545758 M 17421 0 3 EPHA8 dgv184n54 1 22762634 22763402 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545760,nsv545759 M 17421 0 2 EPHA8 dgv185n54 1 22763029 22763710 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545766,nsv545761 M 17421 2 0 EPHA8 dgv186n54 1 22763045 22763502 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545762,nsv545763 M 17421 0 2 EPHA8 dgv187n54 1 22763045 22763729 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545765,nsv545764,nsv545767 M 17421 0 3 EPHA8 nsv545768 1 22763191 22763508 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711318 M 17421 0 1 EPHA8 dgv188n54 1 22763242 22763604 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545769,nsv545770 M 17421 3 0 EPHA8 nsv545771 1 22763242 22763656 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711325,nssv711324,nssv711322,nssv711323 M 17421 2 2 EPHA8 dgv189n54 1 22763242 22763729 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545772,nsv545773 M 17421 0 3 EPHA8 dgv63e59 1 22769510 22769623 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302676,esv3302704 M 185 20 0 EPHA8 NA12878,NA18501,NA18502,NA18508,NA18511,NA18522,NA18870,NA18916,NA18948,NA18952,NA18956,NA18965,NA19093,NA19108,NA19129,NA19225,NA19238,NA19239,NA19240,NA19257 esv3374857 1 22769528 22769622 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670870,essv8670872,essv8670869,essv8670871 M 185 4 0 EPHA8 NA12878,NA19238,NA19239,NA19240 esv994542 1 22773973 22779231 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565422 M 3 1 0 EPHA8 HuRef dgv64e59 1 22776652 22779250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3382026,esv3437457 M 185 2 0 EPHA8 NA19238,NA19240 esv3577 1 22776903 22777261 CNV loss Wang_et_al_2008 18987735 Sequencing essv26018 M 1 0 1 EPHA8 YH nsv820259 1 22776986 22777082 CNV insertion Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418885 M 2 1 0 EPHA8 AK1 esv3440698 1 22777052 22778650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692159 M 185 1 0 EPHA8 NA19239 esv1707275 1 22777074 22777074 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3714244 M 2 1 0 EPHA8 HuRef nsv160591 1 22777075 22778172 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179169 M 24 EPHA8 esv4502 1 22777998 22778245 CNV loss Wang_et_al_2008 18987735 Sequencing essv26943 M 1 0 1 EPHA8 YH esv34161 1 22798842 23016810 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990600 M 270 0 0 C1QA,C1QB,C1QC,EPHA8,EPHB2,MIR4684,MIR6127 nsv476854 1 22815403 22815403 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014206 M 9 1 0 "" NA12878 nsv473644 1 22845387 22845387 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016456 M 9 1 0 C1QC NA19129 esv1510090 1 22858408 22858470 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4329170 M 2 0 1 C1QB HuRef dgv65e59 1 22877152 22878250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330989,esv3367482 M 185 2 0 "" NA19238,NA19239 esv3327416 1 22877352 22878650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692163 M 185 1 0 "" NA19240 nsv481144 1 22914009 22914009 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019815 M 9 0 0 EPHB2 esv2538911 1 22953450 22954195 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5338263 M 1 1 0 EPHB2 NA18507 nsv512725 1 22953875 22954105 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625350 M 1 1 0 EPHB2 1 nsv469829 1 22954609 23135997 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1673091,nssv1676469,nssv1672672,nssv1672826 M 265 0 4 EPHB2,MIR4253 nsv509036 1 22979219 23058578 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619781 M 4 1 0 EPHB2 NA10860 nsv476503 1 22981291 22981291 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011294 M 9 1 0 EPHB2 NA12878 esv1389294 1 23002726 23002776 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3987352 M 2 0 1 EPHB2 HuRef nsv1012432 1 23017176 23037343 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473195 M 29084 0 1 EPHB2 nsv528926 1 23061710 23079271 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705616 M 2026 0 1 EPHB2,MIR4253 nsv6409 1 23097385 23129238 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1954 M 9 1 0 EPHB2 NA18555 esv2504682 1 23149050 23149979 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5188949 M 1 1 0 "" NA18507 esv1485438 1 23149534 23149534 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4125835 M 2 1 0 "" HuRef nsv819213 1 23183977 23211560 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418711 M 2 0 1 C1orf234 AK1 esv3425192 1 23244753 23244761 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863681 M 185 1 0 KDM1A NA12005 nsv6520 1 23276956 23295633 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5396 M 9 1 0 KDM1A,LUZP1 NA19129 nsv819728 1 23317319 23321760 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419637 M 2 0 1 LUZP1 AK1 nsv834424 1 23331991 23475289 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444051 M 95 0 1 HTR1D,LUZP1 nsv821976 1 23367288 23368997 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1429554 M 31 1 0 LUZP1 AK14 nsv479944 1 23436357 23436357 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020457 M 9 0 0 "" nsv481230 1 23441227 23441227 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017604 M 9 0 0 "" nsv480038 1 23442109 23442109 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011032 M 9 0 0 "" nsv945824 1 23443034 23444347 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765183,nssv1765268,nssv1765257,nssv1765210,nssv1765193,nssv1765201,nssv1765203,nssv1765241,nssv1765199,nssv1765239,nssv1765204,nssv1765226,nssv1765252,nssv1765211,nssv1765187,nssv1765229,nssv1765179,nssv1765270,nssv1765256,nssv1765231,nssv1765258,nssv1765264,nssv1765255,nssv1765265,nssv1765176,nssv1765230,nssv1765184,nssv1765228,nssv1765261,nssv1765238,nssv1765189,nssv1765214,nssv1765192,nssv1765237,nssv1765206,nssv1765222,nssv1765180,nssv1765267,nssv1765188,nssv1765207,nssv1765178,nssv1765245,nssv1765182,nssv1765218,nssv1765190,nssv1765216,nssv1765177,nssv1765248,nssv1765196,nssv1765217,nssv1765185,nssv1765236,nssv1765195,nssv1765243,nssv1765186,nssv1765246,nssv1765194,nssv1765235,nssv1765191,nssv1765224,nssv1765254,nssv1765209,nssv1765260,nssv1765263,nssv1765181,nssv1765269,nssv1765253,nssv1765249,nssv1765259,nssv1765251,nssv1765197,nssv1765198,nssv1765213,nssv1765232,nssv1765208,nssv1765250,nssv1765240,nssv1765202,nssv1765220,nssv1765227,nssv1765244,nssv1765205,nssv1765225,nssv1765223,nssv1765242,nssv1765233,nssv1765247,nssv1765271,nssv1765219,nssv1765234,nssv1765215,nssv1765175,nssv1765262,nssv1765200,nssv1765221,nssv1765212,nssv1765266 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv475902 1 23443910 23443910 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011902 M 9 1 0 "" NA12878 nsv480771 1 23444563 23444563 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016100 M 9 0 0 "" nsv480819 1 23445465 23445465 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017381 M 9 0 0 "" nsv6631 1 23466481 23485360 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv964,nssv1966,nssv5405,nssv6423,nssv10760,nssv9804,nssv3974 M 9 7 0 "" NA12156,NA12878,NA18507,NA18555,NA18956,NA19129,NA19240 nsv509047 1 23470552 23489158 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619782,nssv617990,nssv623777,nssv621087 M 4 4 0 "" CHM,NA10860,NA15510,NA18994 esv1003688 1 23475723 23476851 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564590 M 3 1 0 "" HuRef nsv525446 1 23568739 23573899 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701574 M 2026 1 0 C1orf213,ZNF436 nsv521882 1 23583062 23587252 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694653 M 2026 0 1 TCEA3 nsv512726 1 23591356 23591714 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625351 M 1 1 0 TCEA3 1 esv9540 1 23591438 23591769 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31981 M 1 0 0 TCEA3 esv2558689 1 23591446 23591647 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5285756 M 1 0 1 TCEA3 NA18507 dgv28n67 1 23609069 23610338 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv821998,nsv821987 M 31 0 7 TCEA3 AK16,AK18,AK4,NA18547,NA18582,NA18592,NA18999 esv3326511 1 23654652 23656550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692194 M 185 1 0 ASAP3 NA19239 nsv834435 1 23672049 23850518 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444062,nssv1444074 M 95 0 2 ASAP3,E2F2,ID3,MDS2 nsv819574 1 23682227 23683902 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419305 M 2 1 0 ASAP3 AK1 esv3413244 1 23694302 23694302 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823867 M 185 1 0 "" NA12878 esv3417759 1 23694324 23694324 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8638759 M 185 0 0 "" esv1790599 1 23694331 23694331 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3794850 M 2 1 0 "" HuRef esv3417141 1 23723185 23723192 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863682 M 185 1 0 E2F2 NA12005 nsv160295 1 23763647 23767838 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178873 M 24 "" nsv460840 1 23809848 23860948 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537340 M 1557 0 1 MDS2 1780862162_A nsv545774 1 23809848 23860948 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173799 M 17421 0 1 MDS2 1780862162_A esv275297 1 23830358 23833443 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585424 M 1250 0 1 MDS2 esv3303493 1 23853709 23853710 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7763444,essv7766407,essv7764690,essv7767072,essv7765382,essv7768890,essv7767723,essv7768115 M 185 8 0 "" NA07347,NA11918,NA12234,NA12249,NA12287,NA12878,NA12891,NA12892 esv3309057 1 23853711 23853712 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840539,essv7841153,essv7839894 M 185 3 0 "" NA12878,NA12891,NA12892 esv3430049 1 23853718 23853728 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673983,essv8673984,essv8673982 M 185 3 0 "" NA12878,NA12891,NA12892 nsv160080 1 23876065 23879493 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178658 M 24 "" nsv473882 1 23903573 23903573 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018778 M 9 1 0 "" NA12156 esv1587089 1 24036505 24036505 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4060701 M 2 1 0 "" HuRef esv3893081 1 24043045 24112397 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788296 M 3017 1 0 CNR2,FUCA1 esv29329 1 24072733 24073978 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15695,esv12811 M 40 0 15 CNR2 NA11894,NA11931,NA11993,NA12004,NA12749,NA12878,NA18505,NA18511,NA18517,NA18861,NA18907,NA18909,NA19147,NA19190,NA19225 dgv29n67 1 24073049 24073899 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822009,nsv822020,nsv822032,nsv822043 M 31 0 5 CNR2 AK2,AK6,NA18947,NA18951,NA18972 dgv190n54 1 24073111 24073749 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545775,nsv545776,nsv545777 M 17421 0 3 CNR2 nsv545778 1 24073346 24073749 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711334,nssv711332,nssv711333,nssv711335 M 17421 0 4 CNR2 dgv191n54 1 24073359 24073944 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545780,nsv545779 M 17421 0 4 CNR2 esv991485 1 24081324 24087471 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563891 M 3 1 0 CNR2 HuRef nsv512727 1 24082950 24083431 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625352 M 1 1 0 CNR2 1 esv1663042 1 24083423 24083423 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4228988 M 2 1 0 CNR2 HuRef esv3418378 1 24116502 24116512 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863683 M 185 1 0 "" NA12005 nsv6742 1 24126500 24159968 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2882 M 9 1 0 MIR378F,PNRC2 NA18555 nsv945826 1 24141234 24148293 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764963,nssv1764984,nssv1765273,nssv1764978,nssv1765023,nssv1765012,nssv1764961,nssv1764975,nssv1764955,nssv1764981,nssv1764967,nssv1765031,nssv1764972,nssv1765000,nssv1764947,nssv1764988,nssv1765026,nssv1764991,nssv1764951,nssv1764993,nssv1764960,nssv1764976,nssv1764964,nssv1764966,nssv1764949,nssv1765958,nssv1765025,nssv1764987,nssv1764948,nssv1765004,nssv1764953,nssv1764989,nssv1764954,nssv1764968,nssv1764958,nssv1765030,nssv1765028,nssv1765008,nssv1764946,nssv1765961,nssv1764952,nssv1765019,nssv1764950,nssv1765011,nssv1764962,nssv1765010,nssv1765020,nssv1765015,nssv1765024,nssv1765001,nssv1764959,nssv1764996,nssv1764956,nssv1765002,nssv1764957,nssv1764983,nssv1765274,nssv1765959,nssv1764971,nssv1764997,nssv1764974,nssv1765957,nssv1765021,nssv1764980,nssv1765022,nssv1764970,nssv1765027,nssv1765963,nssv1765029,nssv1764995,nssv1764965,nssv1764994,nssv1764973,nssv1764982,nssv1765960,nssv1765007,nssv1764969,nssv1764979,nssv1764986,nssv1765016,nssv1765014,nssv1764977,nssv1765003,nssv1764985,nssv1765005,nssv1765006,nssv1764998,nssv1765272,nssv1765009,nssv1764990,nssv1764999,nssv1765962,nssv1765018,nssv1765017,nssv1765013,nssv1764992,nssv1765956 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945827 1 24168278 24170467 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766041,nssv1766035,nssv1765982,nssv1766030,nssv1765971,nssv1765997,nssv1765980,nssv1766020,nssv1765968,nssv1766053,nssv1765993,nssv1766033,nssv1766043,nssv1765998,nssv1766048,nssv1766010,nssv1766047,nssv1766013,nssv1766050,nssv1766059,nssv1765983,nssv1765994,nssv1765976,nssv1766032,nssv1765981,nssv1766019,nssv1765979,nssv1765989,nssv1765969,nssv1766057,nssv1765995,nssv1766007,nssv1766044,nssv1766028,nssv1765978,nssv1766021,nssv1765975,nssv1766026,nssv1766046,nssv1766056,nssv1765986,nssv1766034,nssv1765985,nssv1765996,nssv1765984,nssv1766018,nssv1766049,nssv1766005,nssv1765966,nssv1766055,nssv1765965,nssv1766054,nssv1765992,nssv1766014,nssv1765974,nssv1766024,nssv1765972,nssv1766017,nssv1766042,nssv1766029,nssv1765967,nssv1766040,nssv1766045,nssv1766012,nssv1765973,nssv1766039,nssv1765970,nssv1766052,nssv1765988,nssv1766000,nssv1765977,nssv1766016,nssv1766031,nssv1766025,nssv1766022,nssv1766009,nssv1766003,nssv1766006,nssv1765991,nssv1766001,nssv1766015,nssv1766037,nssv1765990,nssv1766060,nssv1766036,nssv1766008,nssv1766051,nssv1766058,nssv1766004,nssv1766038,nssv1766027,nssv1766011,nssv1765999,nssv1766002,nssv1765964,nssv1765987,nssv1766023 M 97 10 0 SRSF10 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv511683 1 24191456 24194778 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626322 M 1 0 1 "" 1 esv3393873 1 24201348 24201367 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593802,essv9593813 M 185 2 0 "" NA12287,NA12873 nsv475436 1 24255969 24255969 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014221 M 9 1 0 MYOM3 NA19240 esv2609872 1 24275040 24276823 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5352209 M 1 0 1 MYOM3 NA18507 esv5851 1 24275314 24276190 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28292 M 1 0 0 MYOM3 esv1968924 1 24275390 24276076 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4552184 M 1 0 1 MYOM3 NA18507 esv989974 1 24275574 24275890 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571507 M 3 0 1 MYOM3 HuRef esv1250620 1 24275590 24275907 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3762899 M 2 0 1 MYOM3 HuRef nsv822054 1 24280927 24281558 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431798 M 31 0 1 MYOM3 AK20 nsv472633 1 24302735 24302735 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015597 M 9 1 0 MYOM3 NA18555 nsv506922 1 24347155 24353155 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619227,nssv617526,nssv623264,nssv620647 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 nsv506923 1 24364233 24370233 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619228,nssv617527,nssv623265,nssv620649 M 4 0 0 IFNLR1 CHM,NA10860,NA15510,NA18994 nsv6853 1 24364700 24398808 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8821 M 9 1 0 IFNLR1 NA12156 nsv545781 1 24389467 24395879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711340 M 17421 0 1 "" esv29789 1 24392931 24396291 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14913 M 40 0 7 "" NA07037,NA07045,NA11993,NA12004,NA12044,NA12414,NA12749 dgv30n67 1 24393400 24395993 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822065,nsv822087,nsv822076 M 31 0 14 "" AK12,AK14,AK18,AK20,AK6,AK8,NA18542,NA18547,NA18570,NA18592,NA18942,NA18951,NA18969,NA18973 dgv192n54 1 24394051 24395330 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545790,nsv545786,nsv545791,nsv545784,nsv545783,nsv545785,nsv545782,nsv545792 M 17421 0 74 "" dgv193n54 1 24394051 24395879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545794,nsv545788,nsv545787,nsv545797,nsv545789,nsv545793 M 17421 0 93 "" dgv194n54 1 24394429 24395330 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545796,nsv545795 M 17421 0 2 "" nsv545798 1 24394429 24398583 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711510 M 17421 0 1 "" dgv195n54 1 24394635 24395330 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545801,nsv545799 M 17421 0 4 "" nsv545800 1 24394635 24395575 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711513 M 17421 0 1 "" dgv196n54 1 24394778 24395879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545803,nsv545804,nsv545802 M 17421 0 4 "" nsv475891 1 24412733 24412733 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015467 M 9 1 0 "" NA12878 nsv822098 1 24428586 24429374 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434162 M 31 0 1 "" NA18570 esv2762309 1 24430347 24444667 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7008744 M 1109 0 1 "" SW_1506 nsv469575 1 24452284 24648983 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1676636 M 265 0 1 GRHL3,NIPAL3,STPG1 esv1964436 1 24464970 24465349 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4922131 M 1 0 1 "" NA18507 nsv834447 1 24522170 24677795 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444085 M 95 0 1 GRHL3,NIPAL3,STPG1 esv3426242 1 24534655 24534655 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740957 M 185 1 0 GRHL3 NA19240 esv1739869 1 24544150 24544150 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4074743 M 2 1 0 GRHL3 HuRef esv1745617 1 24544352 24544352 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4185921 M 2 1 0 GRHL3 HuRef esv994910 1 24647483 24651098 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565699 M 3 1 0 NIPAL3 HuRef nsv6965 1 24667583 24687729 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1967 M 9 0 1 NIPAL3 NA18555 nsv545805 1 24670970 24679601 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711521,nssv711520,nssv711522 M 17421 0 3 NIPAL3 esv23193 1 24676884 24680227 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19100,esv9733 M 40 0 4 "" NA11931,NA11993,NA12489,NA12749 nsv498665 1 24677123 24680037 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585415 M 9 0 1 "" dgv197n54 1 24677881 24679420 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545806,nsv545810,nsv545807,nsv545811,nsv545814 M 17421 0 5 "" dgv198n54 1 24677881 24679773 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545813,nsv545809,nsv545812,nsv545808,nsv545815 M 17421 0 117 "" nsv822109 1 24678281 24679447 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431800 M 31 0 1 "" AK20 dgv31n67 1 24678281 24680509 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822131,nsv822120 M 31 0 6 "" AK16,NA18537,NA18547,NA18582,NA18949,NA18969 dgv199n54 1 24678477 24679773 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545816,nsv545820,nsv545818,nsv545819,nsv545817,nsv545822,nsv545821 M 17421 0 18 "" nsv513983 1 24678480 24679292 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857401,nssv2857348,nssv2857371,nssv2857353,nssv2857400,nssv2857374,nssv2857351,nssv2857337,nssv2857357,nssv2857407,nssv2857391,nssv2857418,nssv2857414,nssv2857398,nssv2857330,nssv2857389,nssv2857355,nssv2857362,nssv2857356,nssv2857358,nssv2857350,nssv2857367,nssv2857338,nssv2857345,nssv2857392,nssv2857381,nssv2857349,nssv2857339,nssv2857340,nssv2857408,nssv2857327,nssv2857332,nssv2857369,nssv2857412,nssv2857336,nssv2857383,nssv2857368,nssv2857364,nssv2857360,nssv2857385,nssv2857404,nssv2857390,nssv2857343,nssv2857376,nssv2857399,nssv2857334,nssv2857373,nssv2857405,nssv2857359,nssv2857352,nssv2857397,nssv2857417,nssv2857378,nssv2857395,nssv2857333,nssv2857363,nssv2857403,nssv2857331,nssv2857411,nssv2857410,nssv2857344,nssv2857394,nssv2857415,nssv2857372,nssv2857379,nssv2857388,nssv2857393,nssv2857377,nssv2857413,nssv2857402,nssv2857375,nssv2857328,nssv2857329,nssv2857346,nssv2857382,nssv2857354,nssv2857370,nssv2857380,nssv2857406,nssv2857386,nssv2857409,nssv2857347,nssv2857366,nssv2857384,nssv2857326,nssv2857361,nssv2857396,nssv2857387,nssv2857365,nssv2857341,nssv2857342,nssv2857335,nssv2857416 M 2366 0 93 "" NA06984,NA07349,NA10837,NA10850,NA10857,NA10860,NA11830,NA11840,NA11893,NA11993,NA12043,NA12272,NA12344,NA12348,NA12375,NA12383,NA12399,NA12489,NA12708,NA12718,NA12748,NA12749,NA12753,NA12763,NA12829,NA12832,NA12842,NA12877,NA12890,NA18486,NA18497,NA18510,NA18537,NA18547,NA18555,NA18558,NA18576,NA18582,NA18633,NA18859,NA18860,NA18868,NA18874,NA18910,NA18911,NA18917,NA18924,NA18949,NA18956,NA18960,NA18961,NA18969,NA18980,NA18981,NA18992,NA18995,NA19000,NA19092,NA19096,NA19097,NA19098,NA19101,NA19117,NA19149,NA19151,NA19152,NA19153,NA19154,NA19160,NA19179,NA19184,NA19185,NA19189,NA19191,NA19193,NA19197,NA19200,NA19201,NA19202,NA19205,NA19209,NA19210,NA19211,NA19225,NA19247,NA19249,NA21391,NA21399,NA21476,NA21514,NA21525,NA21581,NA21583 esv1298380 1 24694156 24694156 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3759955 M 2 1 0 "" HuRef nsv472981 1 24722274 24722274 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020463 M 9 1 0 RCAN3 NA19129 nsv545823 1 24767584 24820535 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711663 M 17421 1 0 NCMAP nsv436645 1 24768045 24774830 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465929 M 2 0 1 NCMAP NA18505 esv27046 1 24768383 24773731 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13814 M 40 0 3 NCMAP NA18505,NA18508,NA18511 nsv834458 1 24776906 24868722 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444096 M 95 0 1 NCMAP,SRRM1 esv1961948 1 24801192 24801860 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4674738 M 1 0 1 NCMAP NA18507 nsv473361 1 24812961 24812961 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012740 M 9 1 0 "" NA19129 esv2560351 1 24813235 24814028 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5277621 M 1 1 0 "" NA18507 nsv160922 1 24831331 24839597 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179500 M 24 "" nsv947416 1 24857129 24863556 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2766073 M 97 1 0 SRRM1 HGDP00998 nsv460862 1 24859464 24912454 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537354 M 1557 0 1 SRRM1 HGDP00974 nsv545824 1 24859464 24912454 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173800 M 17421 0 1 SRRM1 HGDP00974 nsv945828 1 24871388 24872155 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766145,nssv1766124,nssv1766063,nssv1766113,nssv1766072,nssv1766129,nssv1766138,nssv1766096,nssv1766085,nssv1766127,nssv1766073,nssv1766135,nssv1766081,nssv1766099,nssv1766079,nssv1766061,nssv1766075,nssv1766156,nssv1766074,nssv1766130,nssv1766077,nssv1766148,nssv1766065,nssv1766116,nssv1766067,nssv1766137,nssv1766068,nssv1766108,nssv1766142,nssv1766101,nssv1766144,nssv1766150,nssv1766140,nssv1766084,nssv1766078,nssv1766093,nssv1766141,nssv1766125,nssv1766066,nssv1766118,nssv1766139,nssv1766132,nssv1766147,nssv1766126,nssv1766146,nssv1766117,nssv1766064,nssv1766107,nssv1766082,nssv1766154,nssv1766076,nssv1766123,nssv1766083,nssv1766110,nssv1766070,nssv1766091,nssv1766092,nssv1766104,nssv1766080,nssv1766095,nssv1766071,nssv1766097,nssv1766143,nssv1766111,nssv1766089,nssv1766098,nssv1766062,nssv1766120,nssv1766069,nssv1766128,nssv1766090,nssv1766121,nssv1766149,nssv1766151,nssv1766114,nssv1766109,nssv1766119,nssv1766086,nssv1766122,nssv1766088,nssv1766131,nssv1766136,nssv1766103,nssv1766100,nssv1766152,nssv1766153,nssv1766102,nssv1766115,nssv1766087,nssv1766094,nssv1766112,nssv1766155,nssv1766133,nssv1766157,nssv1766106,nssv1766105,nssv1766134 M 97 10 0 SRRM1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522437 1 24953109 25059303 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705795 M 2026 1 0 CLIC4 nsv1002864 1 24962097 24995327 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465288 M 29084 0 1 CLIC4 nsv1014245 1 24983491 25042598 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476665 M 29084 1 0 CLIC4 nsv7076 1 24988905 25069215 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv973,nssv3984,nssv1983 M 9 0 3 CLIC4 NA12878,NA18555,NA19240 esv2525447 1 25030307 25034340 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5183045 M 1 0 1 CLIC4 NA18507 esv7429 1 25031013 25034311 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29870 M 1 0 0 CLIC4 esv2082154 1 25031077 25034306 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4974766 M 1 0 1 CLIC4 NA18507 nsv511684 1 25031132 25034328 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626323 M 1 0 1 CLIC4 1 esv3809 1 25031257 25034166 CNV loss Wang_et_al_2008 18987735 Sequencing essv26250 M 1 0 1 CLIC4 YH nsv498666 1 25031274 25034113 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585426 M 9 0 1 CLIC4 esv995974 1 25031277 25034098 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571583 M 3 0 1 CLIC4 HuRef esv1446144 1 25031290 25034112 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3781063 M 2 0 1 CLIC4 HuRef esv995045 1 25031290 25037077 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564027 M 3 0 1 CLIC4 HuRef nsv160319 1 25031291 25034112 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178897 M 24 CLIC4 nsv945829 1 25042197 25043299 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766173,nssv1766214,nssv1766159,nssv1766200,nssv1766167,nssv1766230,nssv1766170,nssv1766202,nssv1766176,nssv1766254,nssv1766236,nssv1766252,nssv1766160,nssv1766249,nssv1766162,nssv1766185,nssv1766174,nssv1766212,nssv1766242,nssv1766210,nssv1766241,nssv1766158,nssv1766165,nssv1766213,nssv1766239,nssv1766246,nssv1766175,nssv1766191,nssv1766163,nssv1766248,nssv1766237,nssv1766193,nssv1766187,nssv1766209,nssv1766235,nssv1766224,nssv1766180,nssv1766226,nssv1766164,nssv1766253,nssv1766189,nssv1766223,nssv1766169,nssv1766198,nssv1766179,nssv1766232,nssv1766182,nssv1766181,nssv1766161,nssv1766205,nssv1766244,nssv1766231,nssv1766178,nssv1766196,nssv1766243,nssv1766247,nssv1766177,nssv1766234,nssv1766168,nssv1766227,nssv1766171,nssv1766183,nssv1766186,nssv1766218,nssv1766166,nssv1766245,nssv1766240,nssv1766204,nssv1766172,nssv1766195,nssv1766238,nssv1766229,nssv1766203,nssv1766184,nssv1766192,nssv1766207,nssv1766216,nssv1766220,nssv1766211,nssv1766219,nssv1766201,nssv1766206,nssv1766225,nssv1766233,nssv1766215,nssv1766251,nssv1766250,nssv1766217,nssv1766221,nssv1766228,nssv1766190,nssv1766199,nssv1766222,nssv1766188,nssv1766208,nssv1766194,nssv1766197 M 97 10 0 CLIC4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26140 1 25074420 25076013 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10325 M 40 0 3 "" NA18909,NA19099,NA19240 nsv508581 1 25083566 25167306 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622760 M 4 0 1 MIR6731,RUNX3 NA18994 dgv132n100 1 25180259 25592186 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010673,nsv1000112,nsv1005598 M 29084 4 0 C1orf63,RHCE,RHD,SYF2,TMEM50A esv3390012 1 25212052 25212950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692243 M 185 1 0 "" NA19239 esv3416321 1 25234652 25236350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692244 M 185 1 0 "" NA19240 esv3412285 1 25237452 25239550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692245 M 185 1 0 "" NA19239 nsv526082 1 25282194 25292029 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702326 M 2026 0 1 "" nsv471772 1 25283474 25283645 CNV loss Hinds_et_al_2006 16327809 Oligo aCGH,PCR nssv646053 M 95 "" esv2758928 1 25318097 25336438 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756839 M 270 0 1 "" NA18524 nsv945830 1 25319848 25324366 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766261,nssv1766549,nssv1766520,nssv1766544,nssv1766588,nssv1766574,nssv1766585,nssv1766561,nssv1766256,nssv1766571,nssv1766529,nssv1766542,nssv1766527,nssv1766543,nssv1766259,nssv1766601,nssv1766525,nssv1766530,nssv1766584,nssv1766555,nssv1766523,nssv1766596,nssv1766590,nssv1766578,nssv1766263,nssv1766547,nssv1766524,nssv1766554,nssv1766262,nssv1766566,nssv1766521,nssv1766597,nssv1766522,nssv1766583,nssv1766592,nssv1766551,nssv1766260,nssv1766565,nssv1766591,nssv1766559,nssv1766531,nssv1766545,nssv1766535,nssv1766560,nssv1766257,nssv1766577,nssv1766528,nssv1766603,nssv1766516,nssv1766539,nssv1766586,nssv1766569,nssv1766519,nssv1766570,nssv1766589,nssv1766602,nssv1766526,nssv1766595,nssv1766517,nssv1766556,nssv1766518,nssv1766580,nssv1766258,nssv1766553,nssv1766538,nssv1766552,nssv1766587,nssv1766568,nssv1766536,nssv1766567,nssv1766593,nssv1766582,nssv1766255,nssv1766563,nssv1766537,nssv1766562,nssv1766579,nssv1766540,nssv1766541,nssv1766573,nssv1766532,nssv1766548,nssv1766546,nssv1766599,nssv1766564,nssv1766598,nssv1766576,nssv1766572,nssv1766594,nssv1766581,nssv1766600,nssv1766557,nssv1766575,nssv1766534,nssv1766550,nssv1766558,nssv1766533 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv523480 1 25332019 25333235 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699245 M 2026 0 1 "" nsv818112 1 25392210 25398468 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417310 M 112 0 1 "" NA18608 nsv7187 1 25396205 25428584 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6432 M 9 1 0 SYF2 NA12156 dgv133n100 1 25427096 25560863 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008533,nsv1013100,nsv997459,nsv997277,nsv1011274,nsv998928,nsv999277,nsv1006609,nsv1001418,nsv1000586,nsv1014746,nsv1003875,nsv1007012,nsv997585,nsv1009563 M 29084 15 0 C1orf63,RHD,SYF2,TMEM50A nsv475560 1 25430187 25430187 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015177 M 9 1 0 SYF2 NA19240 dgv134n100 1 25431147 25519561 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006870,nsv1006754,nsv999496,nsv1005659,nsv1010825,nsv1003163,nsv998556 M 29084 37 0 C1orf63,RHD,SYF2 dgv135n100 1 25443417 25501206 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998391,nsv1014835,nsv1007623,nsv1004078 M 29084 6 0 C1orf63,RHD nsv7298 1 25443655 25544725 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3995,nssv10899,nssv6442,nssv9806 M 9 0 4 C1orf63,RHD,TMEM50A NA12156,NA12878,NA15510,NA18507 nsv232 1 25445605 25544725 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv232 M 1 0 1 C1orf63,RHD,TMEM50A NA15510 nsv545825 1 25446109 25519520 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711664 M 17421 0 1 C1orf63,RHD dgv136n100 1 25447046 25535885 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011605,nsv1011672,nsv1003885,nsv1014241,nsv1007231 M 29084 0 5 RHD nsv834469 1 25454993 25635122 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1444129,nssv1444229,nssv1444107,nssv1444207,nssv1444173,nssv1444162,nssv1444140,nssv1444118,nssv1444196,nssv1444240,nssv1444151,nssv1444185,nssv1444218 M 95 2 11 RHCE,RHD,TMEM50A,TMEM57 dgv137n100 1 25455204 25550964 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005580,nsv1014586,nsv1004985,nsv1009034,nsv1007615,nsv1000921,nsv1008056,nsv1011077,nsv1012311,nsv1006789 M 29084 226 614 RHD,TMEM50A esv2762632 1 25455216 25589952 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7020632,essv7019521,essv7012743,essv7015744,essv7019744,essv7009521,essv7016633,essv7012299,essv7020521,essv7016744,essv7021632,essv7012077,essv7015300,essv7012410,essv7020410,essv7015522,essv7009633,essv7016411,essv7009855,essv7008966,essv7016300,essv7018299,essv7021410,essv7013744,essv7010966,essv7013411,essv7017966,essv7018966,essv7018077,essv7020299,essv7017633,essv7017299,essv7018744,essv7017077,essv7013966,essv7020966,essv7015189,essv7016188,essv7009744,essv7013078,essv7021188,essv7009188,essv7018522,essv7011077,essv7014855,essv7014300,essv7020188,essv7009966,essv7010188,essv7009077,essv7011855,essv7014189,essv7019188,essv7021855,essv7019077,essv7014966,essv7021743,essv7021077,essv7010855,essv7016077,essv7012854,essv7011188,essv7011521,essv7019299,essv7018855,essv7014633,essv7013855,essv7021966,essv7013633,essv7014744,essv7022188,essv7016966,essv7015855,essv7018633,essv7013189,essv7021521,essv7017744,essv7008855,essv7011410,essv7019410,essv7019855,essv7012967,essv7009299,essv7011966,essv7014078,essv7015966,essv7010410,essv7015077,essv7015633,essv7020077,essv7017855,essv7019633,essv7017188,essv7010521,essv7020744,essv7022077,essv7010077,essv7015411,essv7019966,essv7016855,essv7013300,essv7017411,essv7012188,essv7011743,essv7022299,essv7016522,essv7011299,essv7010744,essv7010632,essv7011632,essv7018188,essv7020855,essv7014411,essv7012521,essv7013522,essv7021299,essv7017522,essv7009410,essv7018410,essv7014522,essv7010299,essv7012632 M 1109 5 93 RHCE,RHD,TMEM50A SW_0007,SW_0016,SW_0017,SW_0030,SW_0047,SW_0049,SW_0086,SW_0091,SW_0113,SW_0143,SW_0144,SW_0146,SW_0165,SW_0184,SW_0187,SW_0203,SW_0216,SW_0227,SW_0230,SW_0241,SW_0255,SW_0268,SW_0286,SW_0340,SW_0351,SW_0353,SW_0554,SW_0593,SW_0619,SW_0635,SW_0716,SW_0717,SW_0762,SW_0803,SW_0805,SW_0814,SW_0828,SW_0832,SW_0847,SW_0860,SW_0871,SW_0873,SW_0890,SW_1034,SW_1039,SW_1044,SW_1049,SW_1053,SW_1077,SW_1080,SW_1085,SW_1092,SW_1093,SW_1095,SW_1106,SW_1111,SW_1122,SW_1152,SW_1166,SW_1170,SW_1171,SW_1182,SW_1188,SW_1199,SW_1211,SW_1215,SW_1225,SW_1235,SW_1249,SW_1254,SW_1258,SW_1261,SW_1267,SW_1276,SW_1283,SW_1295,SW_1299,SW_1308,SW_1313,SW_1318,SW_1330,SW_1333,SW_1337,SW_1364,SW_1374,SW_1389,SW_1392,SW_1393,SW_1396,SW_1407,SW_1431,SW_1441,SW_1448,SW_1470,SW_1503,SW_1506,SW_1535,SW_1570 dgv138n100 1 25455418 25519561 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006617,nsv1008344,nsv1007934,nsv1011287,nsv1011563,nsv1009320,nsv1010467 M 29084 406 690 RHD nsv9768 1 25455902 25640203 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv18443,nssv15764,nssv16094,nssv13743,nssv13100,nssv13413,nssv15102,nssv14751,nssv14101,nssv14749,nssv14745,nssv14742,nssv15433,nssv12770,nssv13083,nssv29252,nssv15434,nssv16744,nssv13771,nssv16428,nssv14417,nssv15450,nssv14747,nssv13086,nssv12776,nssv15105,nssv12115,nssv17074,nssv13438,nssv15763,nssv13106,nssv13108,nssv12772,nssv15111,nssv13418,nssv13764,nssv17404,nssv13434,nssv13416,nssv15435,nssv13088 M 31 21 1 RHCE,RHD,TMEM50A,TMEM57 NA07048,NA10839,NA10847,NA10863,NA12155,NA18502,NA18504,NA18517,NA18537,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19144,NA19221,NA19240 nsv822143 1 25457603 25537973 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1433413,nssv1422364,nssv1430337 M 31 0 3 RHD,TMEM50A AK16,NA18526,NA18552 nsv821372 1 25457603 25538019 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420280 M 1 0 1 RHD,TMEM50A NA10851 esv22615 1 25457812 25537782 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19712,esv17091 M 40 24 6 RHD,TMEM50A NA07045,NA11894,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12749,NA12776,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv32921 1 25457932 25537445 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101732,essv96835,essv100169,essv101286,essv95026,essv93733 M 51 3 3 RHD,TMEM50A 21659,21805,21909,21972,22231,22286 dgv3e180 1 25458023 25537400 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1009924,esv990723 M 3 1 0 RHD,TMEM50A HuRef nsv945831 1 25459108 25492538 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766613,nssv1764599,nssv1766635,nssv1766627,nssv1766611,nssv1764614,nssv1764635,nssv1766637,nssv1766622,nssv1764597,nssv1766614,nssv1766634,nssv1766605,nssv1764607,nssv1766606,nssv1764618,nssv1766624,nssv1764610,nssv1766608,nssv1766638,nssv1766632,nssv1766630,nssv1766626,nssv1764616,nssv1764634,nssv1764606,nssv1766620,nssv1764615,nssv1766612,nssv1764609,nssv1766621,nssv1766631,nssv1764638,nssv1764596,nssv1766609,nssv1764628,nssv1766619,nssv1764603,nssv1764632,nssv1764612,nssv1764633,nssv1764604,nssv1766633,nssv1764602,nssv1766618,nssv1764623,nssv1766607,nssv1764620,nssv1766625,nssv1764619,nssv1766617,nssv1766604,nssv1766615,nssv1764600,nssv1764637,nssv1764625,nssv1766628,nssv1764598,nssv1766623,nssv1764613,nssv1764630,nssv1764622,nssv1764631,nssv1764617,nssv1766616,nssv1764624,nssv1764636,nssv1764605,nssv1766610,nssv1764595,nssv1764629,nssv1764611,nssv1764601,nssv1764608,nssv1764594,nssv1766629,nssv1764621,nssv1764627,nssv1766636,nssv1764626 M 97 10 0 RHD HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv200n54 1 25461733 25499919 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545826,nsv545830,nsv545833 M 17421 0 11 RHD esv2421857 1 25461733 25534799 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5140020,essv5047101,essv5139792,essv5067157,essv5137308,essv5010857,essv5013628,essv5056082,essv5082163,essv5113984,essv5146020,essv5067947,essv5024116,essv5058769,essv5023035,essv5109647,essv5113628,essv5097823,essv5105392,essv5033550,essv5087709,essv5112124,essv5128978,essv5042292,essv5141369,essv5091094,essv5041714,essv5131302,essv5105085,essv5047169,essv5118360,essv5026235,essv5079054,essv5025602,essv5129683,essv5058514,essv5017260,essv5059195,essv5014447,essv5123095,essv5017327,essv5158031,essv5022144,essv5065634,essv5113423,essv5136938,essv5145360,essv5124630,essv5085338,essv5108701,essv5009799,essv5082883,essv5096259,essv5111192,essv5092242,essv5087858,essv5160623,essv5095663,essv5012855,essv5024213,essv5130239,essv5128183,essv5135218,essv5079399,essv5122788,essv5098695,essv5056058,essv5117026,essv5122992,essv5128808,essv5078911,essv5057653,essv5050184,essv5060529,essv5057948,essv5040904,essv5066801,essv5138781,essv5017143,essv5032861,essv5026739,essv5073133,essv5096398,essv5037674,essv5085137,essv5082929,essv5023178,essv5015901,essv5140307,essv5015825,essv5048597,essv5016506,essv5151593,essv5159485,essv5059333,essv5157994,essv5054376,essv5147815,essv5038039,essv5120048,essv5105430,essv5030807,essv5088120,essv5054446,essv5116864,essv5008097,essv5155256,essv5152554,essv5035986,essv5138177,essv5150897,essv5009261,essv5002879,essv5072538,essv5114255,essv5091674,essv5156244,essv5034340,essv5046028,essv5003958,essv5051480,essv5046501,essv5120740,essv5025505,essv5076833,essv5073065,essv5064696,essv5151146,essv5099229,essv5081685,essv5025268,essv5078460,essv5090060,essv5133792,essv5014373,essv5078218,essv5133133,essv5143932,essv5058251,essv5093377,essv5090256,essv5121794,essv5024154,essv5040974,essv5065734,essv5108066,essv5113393,essv5124283,essv5130187,essv5089045,essv5018977,essv5053175,essv5076093,essv5089551,essv5045154,essv5147945,essv5007583,essv5049893,essv5118643,essv5147588,essv5018506,essv5158872,essv5034606,essv5021910,essv5036702,essv5055335,essv5012416,essv5156202,essv5114671,essv5136889,essv5080281,essv5116093,essv5032508,essv5017565,essv5064492,essv5068330,essv5053235,essv5142370,essv5043793,essv5149063,essv5152069,essv5026565,essv5133094,essv5157836,essv5053389,essv5025216,essv5029065,essv5107616,essv5070008,essv5078382,essv5099909,essv5118896,essv5025353,essv5158896,essv5047974,essv5142656,essv5050776,essv5134977,essv5133677,essv5033012,essv5146558,essv5130660,essv5123139,essv5150816,essv5010813,essv5044859,essv5137751,essv5011384,essv5124430,essv5108756,essv5091441,essv5088003,essv5004232,essv5125283,essv5021447,essv5016090,essv5082433,essv5055292,essv5125910,essv5053567,essv5044887,essv5069190,essv5004352,essv5151764,essv5057263,essv5094025,essv5064974,essv5080406,essv5147235,essv5137440,essv5056633,essv5003442,essv5008817,essv5129477,essv5009382,essv5017876,essv5029243,essv5136383,essv5080467,essv5109954,essv5039265,essv5128345,essv5158850,essv5128108,essv5030906,essv5128172,essv5056096,essv5115319,essv5069482,essv5005217,essv5007440,essv5035013,essv5147272,essv5075759,essv5048844,essv5152295,essv5091462,essv5065928,essv5065371,essv5113590,essv5109110,essv5094386,essv5124582,essv5020838,essv5094802,essv5023208,essv5033778,essv5138232,essv5020784,essv5153011,essv5154775,essv5147839,essv5153623,essv5155647,essv5058796,essv5028311,essv5003366,essv5007672,essv5125039,essv5059401,essv5037110,essv5079981,essv5028365,essv5004315,essv5157141,essv5095554,essv5014537,essv5016370,essv5150619,essv5132115,essv5118565,essv5131476,essv5037893,essv5042185,essv5047152,essv5028430,essv5022476,essv5016991,essv5144277,essv5116136,essv5027267,essv5076799,essv5087504,essv5008221,essv5094217,essv5145070,essv5058426,essv5055329,essv5088678,essv5135986,essv5059029,essv5151355,essv5153490,essv5033915,essv5145980,essv5143595,essv5089622,essv5062085,essv5076452,essv5070189,essv5050338,essv5149523,essv5111735,essv5065254,essv5024612,essv5116489,essv5113903,essv5033407,essv5063196,essv5106367,essv5080950,essv5022767,essv5009459,essv5045453,essv5141412,essv5003226,essv5089478,essv5059254,essv5158180,essv5142111,essv5157677,essv5088421,essv5033301,essv5077667,essv5115091,essv5106070,essv5037688,essv5135855,essv5139596,essv5044349,essv5132018,essv5083652,essv5016021,essv5083463,essv5134935,essv5037645,essv5049421,essv5105366,essv5063006,essv5122105,essv5002344,essv5111829,essv5014510,essv5003234,essv5109869,essv5141824,essv5097618,essv5145086,essv5152955,essv5080575,essv5106123,essv5073403,essv5010391,essv5130404,essv5058217,essv5130611,essv5066634,essv5039765,essv5148164,essv5127709,essv5047250,essv5110081,essv5159704,essv5125105,essv5018521,essv5133513,essv5079059,essv5135973,essv5157623,essv5122226,essv5002183,essv5134564,essv5039122,essv5007066,essv5119807,essv5143138,essv5066670,essv5046014,essv5012871,essv5003311,essv5130740,essv5124398,essv5002155,essv5158951,essv5121511,essv5108293,essv5054650,essv5046481,essv5067460,essv5055624,essv5154564,essv5142820,essv5130794,essv5068241,essv5034343,essv5024098,essv5048811,essv5047766,essv5116211 M 1184 0 419 RHD NA06984,NA06985,NA06989,NA06991,NA06993,NA06994,NA06995,NA06997,NA07022,NA07029,NA07031,NA07037,NA07045,NA07055,NA07056,NA07346,NA07349,NA07357,NA10830,NA10831,NA10835,NA10837,NA10838,NA10839,NA10843,NA10852,NA10853,NA10854,NA10855,NA10856,NA10859,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11882,NA11893,NA11917,NA11918,NA11919,NA11920,NA11930,NA11931,NA11992,NA11993,NA12003,NA12005,NA12006,NA12043,NA12044,NA12045,NA12056,NA12057,NA12144,NA12145,NA12154,NA12156,NA12234,NA12248,NA12272,NA12273,NA12282,NA12283,NA12335,NA12336,NA12340,NA12341,NA12342,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12400,NA12413,NA12489,NA12546,NA12707,NA12708,NA12716,NA12740,NA12751,NA12752,NA12753,NA12761,NA12763,NA12766,NA12775,NA12776,NA12802,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12878,NA12890,NA12891,NA17980,NA17993,NA18102,NA18122,NA18154,NA18157,NA18159,NA18484,NA18488,NA18497,NA18507,NA18515,NA18516,NA18518,NA18519,NA18520,NA18526,NA18546,NA18552,NA18571,NA18599,NA18609,NA18613,NA18614,NA18615,NA18620,NA18631,NA18636,NA18640,NA18704,NA18855,NA18861,NA18863,NA18867,NA18869,NA18871,NA18872,NA18940,NA18946,NA18955,NA18960,NA18964,NA18994,NA19001,NA19054,NA19066,NA19075,NA19078,NA19079,NA19094,NA19095,NA19102,NA19107,NA19109,NA19117,NA19118,NA19122,NA19131,NA19132,NA19140,NA19141,NA19143,NA19146,NA19154,NA19171,NA19172,NA19173,NA19174,NA19175,NA19176,NA19181,NA19192,NA19193,NA19194,NA19200,NA19202,NA19203,NA19206,NA19209,NA19211,NA19214,NA19221,NA19222,NA19236,NA19237,NA19309,NA19317,NA19327,NA19350,NA19375,NA19379,NA19380,NA19382,NA19435,NA19448,NA19474,NA19649,NA19650,NA19652,NA19653,NA19654,NA19658,NA19659,NA19661,NA19662,NA19678,NA19680,NA19684,NA19685,NA19686,NA19700,NA19703,NA19716,NA19746,NA19749,NA19751,NA19773,NA19776,NA19778,NA19782,NA19784,NA19794,NA19819,NA19828,NA19900,NA19901,NA20276,NA20277,NA20279,NA20284,NA20287,NA20288,NA20289,NA20290,NA20297,NA20317,NA20319,NA20332,NA20333,NA20334,NA20335,NA20336,NA20342,NA20343,NA20344,NA20345,NA20349,NA20350,NA20356,NA20360,NA20363,NA20504,NA20505,NA20506,NA20509,NA20512,NA20516,NA20518,NA20519,NA20522,NA20524,NA20528,NA20529,NA20530,NA20534,NA20538,NA20539,NA20540,NA20541,NA20543,NA20586,NA20589,NA20752,NA20754,NA20755,NA20756,NA20759,NA20760,NA20761,NA20765,NA20766,NA20768,NA20770,NA20771,NA20773,NA20775,NA20778,NA20783,NA20785,NA20786,NA20787,NA20792,NA20796,NA20797,NA20801,NA20807,NA20808,NA20809,NA20811,NA20813,NA20819,NA20826,NA20846,NA20847,NA20849,NA20851,NA20852,NA20854,NA20858,NA20859,NA20861,NA20870,NA20871,NA20873,NA20875,NA20879,NA20882,NA20884,NA20885,NA20888,NA20891,NA20892,NA20894,NA20895,NA20896,NA20897,NA20899,NA20900,NA20902,NA20904,NA20908,NA20911,NA21089,NA21090,NA21091,NA21092,NA21100,NA21101,NA21102,NA21103,NA21104,NA21105,NA21107,NA21113,NA21115,NA21117,NA21118,NA21123,NA21137,NA21141,NA21143,NA21144,NA21295,NA21301,NA21302,NA21303,NA21333,NA21339,NA21353,NA21356,NA21359,NA21367,NA21371,NA21381,NA21385,NA21386,NA21390,NA21391,NA21399,NA21401,NA21402,NA21403,NA21404,NA21405,NA21423,NA21424,NA21434,NA21435,NA21436,NA21441,NA21473,NA21475,NA21478,NA21480,NA21488,NA21489,NA21490,NA21524,NA21574,NA21575,NA21583,NA21599,NA21600,NA21601,NA21631,NA21635,NA21636,NA21647,NA21648,NA21678,NA21717,NA21718,NA21738,NA21740,NA21825 dgv201n54 1 25461733 25538558 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545839,nsv545828,nsv545842,nsv545841,nsv545840,nsv545827,nsv545831,nsv545838 M 17421 0 44 RHD,TMEM50A nsv433185 1 25462210 25537253 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463066 M 9 0 1 RHD NA12156 nsv820028 1 25463365 25536785 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418757 M 2 1 0 RHD AK1 nsv498667 1 25463557 25535542 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585437 M 9 0 1 RHD nsv7174 1 25464374 25590811 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9262,nssv9251 M 9 0 0 RHCE,RHD,TMEM50A NA18517 nsv513984 1 25465250 25536194 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2858380,nssv2856904,nssv2858389,nssv2857070,nssv2858431,nssv2855821,nssv2857025,nssv2857009,nssv2856924,nssv2858438,nssv2857008,nssv2857057,nssv2855840,nssv2856973,nssv2858485,nssv2857077,nssv2856895,nssv2856956,nssv2857043,nssv2858445,nssv2856968,nssv2856931,nssv2858470,nssv2856953,nssv2858367,nssv2855873,nssv2855829,nssv2857010,nssv2856897,nssv2858407,nssv2856892,nssv2858473,nssv2857018,nssv2855788,nssv2855830,nssv2857013,nssv2856961,nssv2858396,nssv2856990,nssv2856957,nssv2858483,nssv2855789,nssv2857005,nssv2855815,nssv2857083,nssv2856998,nssv2856929,nssv2855782,nssv2856926,nssv2855825,nssv2857035,nssv2857004,nssv2855774,nssv2857030,nssv2858474,nssv2857031,nssv2855857,nssv2856905,nssv2858486,nssv2855790,nssv2858429,nssv2858465,nssv2857079,nssv2858468,nssv2856944,nssv2856894,nssv2858364,nssv2855851,nssv2857042,nssv2858369,nssv2857097,nssv2858456,nssv2857067,nssv2858368,nssv2856911,nssv2858448,nssv2857076,nssv2858427,nssv2857037,nssv2855791,nssv2856942,nssv2857019,nssv2856988,nssv2857073,nssv2857099,nssv2855817,nssv2858469,nssv2855841,nssv2855812,nssv2855835,nssv2855827,nssv2856962,nssv2857045,nssv2858405,nssv2857002,nssv2856979,nssv2855775,nssv2856887,nssv2858454,nssv2856982,nssv2858441,nssv2857040,nssv2858409,nssv2856912,nssv2856950,nssv2858401,nssv2857029,nssv2858494,nssv2858419,nssv2857074,nssv2855854,nssv2856996,nssv2858392,nssv2855846,nssv2856919,nssv2855861,nssv2856993,nssv2857090,nssv2855864,nssv2855839,nssv2856888,nssv2856925,nssv2858471,nssv2855852,nssv2857085,nssv2858423,nssv2858426,nssv2858399,nssv2855868,nssv2857034,nssv2858459,nssv2857026,nssv2857021,nssv2858403,nssv2857098,nssv2855867,nssv2858477,nssv2858410,nssv2855777,nssv2856906,nssv2855865,nssv2858481,nssv2858390,nssv2858402,nssv2856941,nssv2858440,nssv2855849,nssv2858406,nssv2856898,nssv2856893,nssv2856986,nssv2858415,nssv2858388,nssv2855773,nssv2856969,nssv2856940,nssv2856987,nssv2858371,nssv2855860,nssv2855819,nssv2856891,nssv2858408,nssv2856994,nssv2856967,nssv2856901,nssv2856884,nssv2858374,nssv2856948,nssv2858461,nssv2855871,nssv2858457,nssv2855810,nssv2857028,nssv2858466,nssv2857088,nssv2857036,nssv2855823,nssv2855802,nssv2856921,nssv2858493,nssv2856936,nssv2858422,nssv2857017,nssv2855778,nssv2856992,nssv2858373,nssv2856903,nssv2856896,nssv2858450,nssv2857051,nssv2858451,nssv2855844,nssv2857046,nssv2856965,nssv2858370,nssv2858382,nssv2858480,nssv2857050,nssv2857058,nssv2857006,nssv2855811,nssv2856997,nssv2857082,nssv2857012,nssv2855866,nssv2856918,nssv2857086,nssv2858432,nssv2857084,nssv2857062,nssv2857023,nssv2858444,nssv2858443,nssv2856976,nssv2857063,nssv2857080,nssv2857069,nssv2856908,nssv2855780,nssv2855798,nssv2857089,nssv2857093,nssv2856907,nssv2855824,nssv2858379,nssv2858376,nssv2856934,nssv2856939,nssv2856890,nssv2858421,nssv2856886,nssv2855832,nssv2856952,nssv2855785,nssv2855805,nssv2856978,nssv2855853,nssv2856910,nssv2856882,nssv2855786,nssv2855801,nssv2858488,nssv2856951,nssv2855845,nssv2856960,nssv2856889,nssv2855872,nssv2856954,nssv2856972,nssv2855833,nssv2855859,nssv2855783,nssv2856935,nssv2856938,nssv2856932,nssv2857020,nssv2856983,nssv2857016,nssv2858442,nssv2855781,nssv2858433,nssv2858384,nssv2855814,nssv2856971,nssv2858482,nssv2858463,nssv2855809,nssv2856914,nssv2856915,nssv2855793,nssv2855779,nssv2858377,nssv2858394,nssv2855784,nssv2857047,nssv2857044,nssv2858425,nssv2857092,nssv2858492,nssv2855843,nssv2857053,nssv2858404,nssv2858381,nssv2858484,nssv2856970,nssv2857024,nssv2855826,nssv2855863,nssv2855816,nssv2855796,nssv2855836,nssv2856880,nssv2858424,nssv2858453,nssv2857056,nssv2857052,nssv2858455,nssv2858437,nssv2855834,nssv2857091,nssv2858452,nssv2855855,nssv2858434,nssv2857003,nssv2856955,nssv2856991,nssv2856981,nssv2858436,nssv2858395,nssv2857049,nssv2858447,nssv2857022,nssv2858472,nssv2857094,nssv2858458,nssv2858428,nssv2857066,nssv2856922,nssv2856943,nssv2855828,nssv2857007,nssv2856989,nssv2858391,nssv2856902,nssv2856985,nssv2856975,nssv2855787,nssv2858478,nssv2858475,nssv2858387,nssv2855858,nssv2858414,nssv2857095,nssv2857048,nssv2856977,nssv2856913,nssv2855862,nssv2856881,nssv2857014,nssv2856927,nssv2858491,nssv2855806,nssv2858420,nssv2858393,nssv2856966,nssv2857078,nssv2857011,nssv2855803,nssv2856909,nssv2858412,nssv2858449,nssv2856899,nssv2856980,nssv2855813,nssv2857072,nssv2855794,nssv2857038,nssv2856923,nssv2857059,nssv2857032,nssv2858375,nssv2858411,nssv2856999,nssv2857060,nssv2856963,nssv2855822,nssv2858439,nssv2857071,nssv2858487,nssv2856945,nssv2856885,nssv2856964,nssv2856947,nssv2856928,nssv2857068,nssv2858418,nssv2856974,nssv2856917,nssv2858386,nssv2855795,nssv2855869,nssv2858413,nssv2855792,nssv2856995,nssv2858416,nssv2857065,nssv2858479,nssv2858378,nssv2856916,nssv2856958,nssv2856883,nssv2858400,nssv2858460,nssv2856946,nssv2858383,nssv2858464,nssv2857081,nssv2856959,nssv2858398,nssv2857000,nssv2855838,nssv2858435,nssv2857039,nssv2858372,nssv2858365,nssv2857075,nssv2856984,nssv2857041,nssv2857054,nssv2858467,nssv2855776,nssv2858397,nssv2858489,nssv2857001,nssv2855818,nssv2855848,nssv2855874,nssv2855856,nssv2855842,nssv2858446,nssv2856933,nssv2855807,nssv2855847,nssv2856920,nssv2857015,nssv2855808,nssv2857055,nssv2858490,nssv2855820,nssv2855870,nssv2858476,nssv2857033,nssv2857061,nssv2856949,nssv2857087,nssv2856930,nssv2857064,nssv2857096,nssv2858417,nssv2856937,nssv2858366,nssv2856900,nssv2858462,nssv2855850,nssv2857027,nssv2855804,nssv2855797,nssv2855831,nssv2858430,nssv2858385,nssv2855800,nssv2855799,nssv2855837 M 2366 453 0 RHD NA06985,NA06986,NA06991,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10831,NA10835,NA10836,NA10838,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11894,NA11917,NA11918,NA11920,NA11930,NA11992,NA11994,NA11995,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12340,NA12341,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12485,NA12489,NA12546,NA12708,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12842,NA12864,NA12872,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21718 dgv202n54 1 25465670 25492176 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545829,nsv545832 M 17421 0 6 RHD esv3584591 1 25465715 25519533 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838688 M 34 0 1 RHD KSF024 nsv442830 1 25465715 25534592 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617671,nssv1617690,nssv1617701,nssv1617675,nssv1617634,nssv1617699,nssv1617703,nssv1617663,nssv1617642,nssv1617641,nssv1617674,nssv1617716,nssv1617665,nssv1617719,nssv1617683,nssv1617712,nssv1617708,nssv1617723,nssv1617678,nssv1617706,nssv1617651,nssv1617710,nssv1617726,nssv1617728,nssv1617684,nssv1617737,nssv1617635,nssv1617729,nssv1617692,nssv1617715,nssv1617696,nssv1617742,nssv1617681,nssv1617745,nssv1617655,nssv1617718,nssv1617645,nssv1617720,nssv1617731,nssv1617707,nssv1617697,nssv1617682,nssv1617664,nssv1617644,nssv1617744,nssv1617679,nssv1617667,nssv1617714,nssv1617700,nssv1617739,nssv1617685,nssv1617687,nssv1617653,nssv1617727,nssv1617643,nssv1617709,nssv1617738,nssv1617670,nssv1617735,nssv1617654,nssv1617652,nssv1617676,nssv1617704,nssv1617649,nssv1617659,nssv1617660,nssv1617656,nssv1617672,nssv1617689,nssv1617673,nssv1617686,nssv1617694,nssv1617646,nssv1617648,nssv1617639,nssv1617668,nssv1617730,nssv1617666,nssv1617662,nssv1617721,nssv1617677,nssv1617637,nssv1617640,nssv1617734,nssv1617711,nssv1617638,nssv1617695,nssv1617741,nssv1617688,nssv1617657,nssv1617717,nssv1617693,nssv1617732,nssv1617633,nssv1617740,nssv1617650,nssv1617722,nssv1617733,nssv1617705,nssv1617661,nssv1617698,nssv1617743 M 270 0 102 RHD NA06985,NA06991,NA06993,NA06994,NA07022,NA07029,NA07034,NA07055,NA07056,NA07357,NA10830,NA10831,NA10835,NA10838,NA10839,NA10851,NA10854,NA10855,NA10856,NA10859,NA10860,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11882,NA11992,NA11993,NA12003,NA12004,NA12005,NA12006,NA12043,NA12044,NA12056,NA12057,NA12144,NA12145,NA12154,NA12156,NA12234,NA12236,NA12248,NA12707,NA12716,NA12740,NA12751,NA12752,NA12753,NA12761,NA12763,NA12802,NA12815,NA12864,NA12872,NA12873,NA12874,NA12878,NA12891,NA18507,NA18515,NA18516,NA18526,NA18552,NA18571,NA18609,NA18620,NA18636,NA18855,NA18861,NA18863,NA18871,NA18872,NA18940,NA18960,NA18964,NA18994,NA19092,NA19094,NA19102,NA19131,NA19132,NA19140,NA19141,NA19143,NA19154,NA19171,NA19172,NA19173,NA19192,NA19193,NA19194,NA19200,NA19202,NA19203,NA19206,NA19209,NA19211,NA19221,NA19222 esv2764200 1 25465715 25535931 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005255,essv7005260,essv7005247,essv7005241,essv7005253,essv7005270,essv7005251,essv7005261,essv7005249,essv7005244,essv7005248,essv7005231,essv7005264,essv7005230,essv7005266,essv7005242,essv7005233,essv7005269,essv7005274,essv7005236,essv7005240,essv7005265,essv7005271,essv7005259,essv7005237,essv7005273,essv7005246,essv7005232,essv7005263,essv7005268,essv7005252,essv7005239,essv7005254,essv7005272,essv7005258,essv7005275,essv7005262,essv7005238,essv7005243,essv7005250,essv7005235,essv7005257 M 1109 6 36 RHD RW_0017,RW_0018,RW_0023,RW_0025,RW_0042,RW_0049,RW_0053,RW_0064,RW_0068,RW_0072,RW_0079,RW_0088,RW_0106,RW_0123,RW_0129,RW_0132,RW_0152,RW_0158,RW_0168,RW_0171,RW_0173,RW_0190,RW_0209,RW_0216,RW_0220,RW_0227,RW_0241,RW_0253,RW_0254,RW_0310,RW_0325,RW_0502,RW_0513,RW_0550,RW_0554,RW_0564,RW_0568,RW_0571,RW_0587,RW_0615,RW_0624,RW_0664 nsv7409 1 25467919 25500774 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4006 M 9 1 0 RHD NA12878 dgv139n100 1 25468522 25519521 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012128,nsv1013309 M 29084 0 22 RHD dgv140n100 1 25468522 25560863 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007888,nsv1000590,nsv999620,nsv1001739,nsv1005890,nsv1014567,nsv998813,nsv1000220,nsv1011005,nsv999016,nsv1007059,nsv1000794 M 29084 31 0 RHD,TMEM50A nsv822154 1 25468568 25538019 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431065,nssv1429556 M 31 2 0 RHD,TMEM50A AK14,AK18 dgv141n100 1 25468980 25550964 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997527,nsv1014951,nsv998503,nsv1002585,nsv1005538,nsv1011490,nsv1014847,nsv1009868 M 29084 0 40 RHD,TMEM50A esv2451224 1 25469238 25531749 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5204513 M 1 0 1 RHD NA18507 dgv203n54 1 25470863 25519520 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545835,nsv545850,nsv545845,nsv545851,nsv545847,nsv545848,nsv545849,nsv545846,nsv545834 M 17421 0 34 RHD dgv204n54 1 25470863 25528125 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545836,nsv545837 M 17421 2 23 RHD nsv545843 1 25470863 25566773 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711770,nssv711769 M 17421 0 2 RHCE,RHD,TMEM50A nsv482212 1 25471568 25529523 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558573 M 1 1 0 RHD KB1 dgv142n100 1 25472880 25535885 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008571,nsv1005511,nsv1004546 M 29084 19 0 RHD nsv545844 1 25475511 25499919 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711771 M 17421 0 1 RHD dgv205n54 1 25478794 25537253 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545855,nsv545852,nsv545856,nsv545857,nsv545858 M 17421 0 7 RHD esv29949 1 25482036 25536138 CNV gain Wheeler_et_al_2008 18421352 Oligo aCGH,Sequencing essv84188 M 3 1 0 RHD WATSON esv3375696 1 25482652 25486850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692246 M 185 1 0 RHD NA12892 dgv206n54 1 25483680 25515183 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545853,nsv545854 M 17421 0 3 RHD esv29997 1 25488723 25521045 CNV gain Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv84236 M 2 1 0 RHD HuRef nsv945832 1 25492538 25493637 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764657,nssv1764700,nssv1764643,nssv1764674,nssv1764722,nssv1765655,nssv1764651,nssv1764691,nssv1764663,nssv1764709,nssv1764720,nssv1764665,nssv1764670,nssv1764698,nssv1764667,nssv1764681,nssv1764668,nssv1764706,nssv1764648,nssv1765658,nssv1764656,nssv1764702,nssv1764647,nssv1765650,nssv1764640,nssv1764673,nssv1764646,nssv1764699,nssv1764644,nssv1764710,nssv1764645,nssv1764688,nssv1764660,nssv1764687,nssv1764658,nssv1764714,nssv1764649,nssv1764703,nssv1765648,nssv1764707,nssv1764718,nssv1764713,nssv1764655,nssv1764690,nssv1765649,nssv1764701,nssv1764717,nssv1764686,nssv1764650,nssv1764689,nssv1764716,nssv1765652,nssv1764721,nssv1764683,nssv1764654,nssv1764639,nssv1764642,nssv1764662,nssv1764659,nssv1764696,nssv1764719,nssv1765651,nssv1764653,nssv1764664,nssv1764661,nssv1764671,nssv1764723,nssv1764695,nssv1764641,nssv1764677,nssv1764652,nssv1764694,nssv1764708,nssv1764679,nssv1764705,nssv1764684,nssv1764693,nssv1765656,nssv1764692,nssv1765653,nssv1765659,nssv1764715,nssv1764678,nssv1764712,nssv1764682,nssv1764669,nssv1764680,nssv1764711,nssv1764697,nssv1764666,nssv1764676,nssv1765657,nssv1765654,nssv1764685,nssv1764675,nssv1764704,nssv1764672 M 97 10 0 RHD HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945833 1 25493637 25537924 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765682,nssv1765711,nssv1765739,nssv1765696,nssv1765732,nssv1765683,nssv1765737,nssv1765725,nssv1765676,nssv1765718,nssv1765664,nssv1765716,nssv1765678,nssv1765706,nssv1765663,nssv1765727,nssv1765736,nssv1765693,nssv1765689,nssv1765728,nssv1765669,nssv1765697,nssv1765672,nssv1765707,nssv1765675,nssv1765709,nssv1765730,nssv1765701,nssv1765662,nssv1765699,nssv1765677,nssv1765695,nssv1765688,nssv1765685,nssv1765734,nssv1765720,nssv1765681,nssv1765724,nssv1765733,nssv1765713,nssv1765735,nssv1765729,nssv1765680,nssv1765703,nssv1765661,nssv1765717,nssv1765738,nssv1765722,nssv1765667,nssv1765710,nssv1765668,nssv1765719,nssv1765674,nssv1765686,nssv1765691,nssv1765687,nssv1765684,nssv1765726,nssv1765679,nssv1765712,nssv1765666,nssv1765702,nssv1765671,nssv1765715,nssv1765673,nssv1765721,nssv1765665,nssv1765700,nssv1765670,nssv1765692,nssv1765731,nssv1765694,nssv1765723,nssv1765705,nssv1765704,nssv1765708,nssv1765660,nssv1765690,nssv1765698,nssv1765714 M 97 10 0 RHD,TMEM50A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv207n54 1 25497633 25519520 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545860,nsv545859 M 17421 0 3 RHD nsv1010001 1 25500660 25558419 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468965 M 29084 1 0 RHD,TMEM50A nsv545861 1 25502225 25519520 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711801 M 17421 1 0 RHD dgv208n54 1 25502225 25532274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545865,nsv545862,nsv545864 M 17421 0 23 RHD nsv545863 1 25506792 25519520 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711803,nssv711815,nssv711804,nssv711806,nssv711807,nssv711805,nssv711809,nssv711808,nssv711814,nssv711810,nssv711813,nssv711812,nssv711811,nssv711817,nssv711819,nssv711818,nssv711816 M 17421 0 17 RHD dgv209n54 1 25506792 25537386 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545869,nsv545866,nsv545871,nsv545867 M 17421 0 10 RHD,TMEM50A nsv821617 1 25510392 25559491 CNV loss Sebat_et_al_2004 15273396 ROMA nssv1421396,nssv1421385 M 31 0 2 RHD,TMEM50A dgv210n54 1 25510840 25532274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545868,nsv545870 M 17421 0 3 RHD nsv834480 1 25511185 25641885 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444251 M 95 1 0 RHCE,RHD,TMEM50A,TMEM57 nsv499798 1 25528107 25565790 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585484 M 9 0 0 RHCE,RHD,TMEM50A nsv1009831 1 25535885 25618826 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468788 M 29084 1 0 RHCE,TMEM50A esv996331 1 25561153 25623155 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586287 M 3 1 0 RHCE,TMEM50A HuRef esv28510 1 25561198 25624359 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv21345,esv10711,esv16269 M 40 23 7 RHCE,TMEM50A NA07045,NA11894,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12749,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv482037 1 25561328 25619950 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558398 M 1 1 0 RHCE,TMEM50A KB1 dgv211n54 1 25561584 25567564 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545873,nsv545872,nsv545874 M 17421 0 10 RHCE nsv945834 1 25561642 25594358 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765813,nssv1765805,nssv1765814,nssv1765791,nssv1765758,nssv1765794,nssv1765812,nssv1765773,nssv1765756,nssv1765785,nssv1765744,nssv1765784,nssv1765751,nssv1765763,nssv1765817,nssv1765778,nssv1765755,nssv1765798,nssv1765750,nssv1765803,nssv1765819,nssv1765774,nssv1765760,nssv1765780,nssv1765816,nssv1765807,nssv1765815,nssv1765770,nssv1765743,nssv1765740,nssv1765769,nssv1765786,nssv1765762,nssv1765765,nssv1765757,nssv1765809,nssv1765818,nssv1765787,nssv1765764,nssv1765797,nssv1765761,nssv1765776,nssv1765741,nssv1765775,nssv1765746,nssv1765793,nssv1765749,nssv1765804,nssv1765742,nssv1765789,nssv1765759,nssv1765800,nssv1765768,nssv1765777,nssv1765748,nssv1765796,nssv1765810,nssv1765781,nssv1765754,nssv1765799,nssv1765747,nssv1765802,nssv1765752,nssv1765795,nssv1765753,nssv1765808,nssv1765745,nssv1765792,nssv1765771,nssv1765783,nssv1765811,nssv1765779,nssv1765806,nssv1765766,nssv1765790,nssv1765772,nssv1765782,nssv1765767,nssv1765788,nssv1765801 M 97 10 0 RHCE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv212n54 1 25563538 25567564 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545876,nsv545875,nsv545877,nsv545878 M 17421 0 6 RHCE dgv213n54 1 25568195 25571242 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545880,nsv545879 M 17421 0 4 RHCE esv2762137 1 25583643 25595837 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005276 M 1109 1 0 RHCE RW_0117 nsv7479 1 25584324 25617005 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6452 M 9 1 0 RHCE NA12156 nsv945835 1 25594358 25601944 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765836,nssv1765911,nssv1765904,nssv1765910,nssv1765838,nssv1765908,nssv1765829,nssv1765846,nssv1765897,nssv1765894,nssv1765827,nssv1765870,nssv1765832,nssv1765893,nssv1765899,nssv1765865,nssv1765830,nssv1765895,nssv1765824,nssv1765852,nssv1765903,nssv1765820,nssv1765851,nssv1765862,nssv1765906,nssv1765889,nssv1765826,nssv1765847,nssv1765902,nssv1765912,nssv1765837,nssv1765874,nssv1765831,nssv1765878,nssv1765825,nssv1765854,nssv1765901,nssv1765881,nssv1765835,nssv1765871,nssv1765821,nssv1765864,nssv1765841,nssv1765887,nssv1765834,nssv1765860,nssv1765840,nssv1765913,nssv1765842,nssv1765914,nssv1765848,nssv1765858,nssv1765822,nssv1765916,nssv1765828,nssv1765888,nssv1765839,nssv1765868,nssv1765823,nssv1765892,nssv1765898,nssv1765843,nssv1765833,nssv1765866,nssv1765849,nssv1765883,nssv1765844,nssv1765877,nssv1765905,nssv1765884,nssv1765900,nssv1765845,nssv1765855,nssv1765896,nssv1765885,nssv1765867,nssv1765850,nssv1765879,nssv1765853,nssv1765869,nssv1765915,nssv1765907,nssv1765856,nssv1765873,nssv1765859,nssv1765876,nssv1765890,nssv1765909,nssv1765857,nssv1765882,nssv1765880,nssv1765891,nssv1765875,nssv1765886,nssv1765863,nssv1765861,nssv1765872 M 97 10 0 RHCE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945837 1 25601944 25624909 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766671,nssv1766657,nssv1765939,nssv1766650,nssv1765935,nssv1765951,nssv1765933,nssv1765949,nssv1765921,nssv1766643,nssv1766670,nssv1766639,nssv1765928,nssv1766642,nssv1766675,nssv1766667,nssv1765931,nssv1766668,nssv1765937,nssv1766663,nssv1765946,nssv1766669,nssv1765934,nssv1766661,nssv1766676,nssv1766648,nssv1765923,nssv1766664,nssv1765922,nssv1766654,nssv1765920,nssv1765953,nssv1765919,nssv1765950,nssv1766677,nssv1765954,nssv1765932,nssv1766658,nssv1765948,nssv1765944,nssv1765929,nssv1766640,nssv1765927,nssv1766655,nssv1766679,nssv1765942,nssv1765938,nssv1766644,nssv1766672,nssv1765943,nssv1765918,nssv1766647,nssv1766674,nssv1765917,nssv1765925,nssv1766659,nssv1765945,nssv1766653,nssv1765936,nssv1766652,nssv1766673,nssv1766641,nssv1765930,nssv1766651,nssv1766678,nssv1766645,nssv1765926,nssv1766665,nssv1765924,nssv1766662,nssv1765941,nssv1766649,nssv1765955,nssv1765947,nssv1765952,nssv1766660,nssv1766656,nssv1765940,nssv1766666,nssv1766646 M 97 10 0 RHCE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545881 1 25605135 25608713 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711875 M 17421 0 1 RHCE nsv480324 1 25613749 25613749 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010836 M 9 0 0 RHCE nsv479344 1 25614703 25614703 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013510 M 9 0 0 RHCE nsv481117 1 25617238 25617238 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016459 M 9 0 0 RHCE nsv479861 1 25620134 25620134 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010883 M 9 0 0 "" nsv479805 1 25620195 25620195 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011109 M 9 0 0 "" nsv479901 1 25620430 25620430 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011143 M 9 0 0 "" nsv480379 1 25620793 25620793 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018956 M 9 0 0 "" nsv479196 1 25621333 25621333 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014536 M 9 0 0 "" nsv479194 1 25621421 25621421 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020531 M 9 0 0 "" nsv479086 1 25626796 25626796 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011071 M 9 0 0 "" esv2570786 1 25631110 25632621 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5375032 M 1 0 1 TMEM57 NA18507 nsv480155 1 25632163 25632163 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020275 M 9 0 0 TMEM57 nsv474866 1 25632170 25632170 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010859 M 9 1 0 TMEM57 NA18956 nsv477052 1 25634116 25634116 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020165 M 9 1 0 TMEM57 NA18517 nsv471819 1 25634668 25634668 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012970 M 9 1 0 TMEM57 NA18555 nsv479992 1 25634945 25634945 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016889 M 9 0 0 TMEM57 nsv479544 1 25635641 25635641 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017923 M 9 0 0 TMEM57 nsv480469 1 25635756 25635756 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011202 M 9 0 0 TMEM57 nsv480564 1 25635870 25635870 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019950 M 9 0 0 TMEM57 nsv480070 1 25640186 25640186 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014701 M 9 0 0 TMEM57 nsv474100 1 25643101 25643101 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015884 M 9 1 0 TMEM57 NA12156 nsv479765 1 25644998 25644998 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011014 M 9 0 0 TMEM57 nsv480393 1 25645247 25645247 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010911 M 9 0 0 TMEM57 nsv474039 1 25645311 25645311 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019468 M 9 1 0 TMEM57 NA12156 nsv479656 1 25648059 25648059 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016917 M 9 0 0 TMEM57 dgv71e59 1 25707852 25708150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3413689,esv3445747 M 185 2 0 "" NA12891,NA12892 esv3450111 1 25728279 25728662 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652078 M 185 1 0 "" NA19240 esv3310450 1 25728582 25728582 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843644,essv7843646,essv7843645 M 185 3 0 "" NA19238,NA19239,NA19240 esv3381307 1 25728583 25728583 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653233,essv8653234,essv8653235 M 185 3 0 "" NA19238,NA19239,NA19240 nsv480715 1 25764471 25764471 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016389 M 9 0 0 LDLRAP1 nsv477742 1 25768596 25768596 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019300 M 9 1 0 "" NA18517 nsv479294 1 25768737 25768737 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018335 M 9 0 0 "" nsv480818 1 25769505 25769505 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010744 M 9 0 0 "" nsv480597 1 25772074 25772074 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017202 M 9 0 0 "" nsv478983 1 25775644 25775644 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017876 M 9 0 0 "" nsv480023 1 25776591 25776591 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011670 M 9 0 0 "" nsv477804 1 25777669 25777669 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013432 M 9 1 0 "" NA18517 nsv481318 1 25777823 25777823 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013716 M 9 0 0 "" nsv480169 1 25779012 25779012 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019987 M 9 0 0 "" nsv479385 1 25779261 25779261 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014935 M 9 0 0 "" nsv480202 1 25779498 25779498 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016088 M 9 0 0 "" nsv476293 1 25780646 25780646 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016128 M 9 1 0 "" NA12878 nsv475325 1 25780899 25780899 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012172 M 9 1 0 "" NA19240 nsv481307 1 25782926 25782926 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016750 M 9 0 0 "" nsv480669 1 25783187 25783187 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011149 M 9 0 0 "" nsv480032 1 25783461 25783461 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020469 M 9 0 0 "" nsv475110 1 25786141 25786141 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019725 M 9 1 0 "" NA19240 nsv473914 1 25788479 25788479 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016731 M 9 1 0 "" NA12156 nsv480591 1 25788870 25788870 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019801 M 9 0 0 "" nsv481331 1 25789418 25789418 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017157 M 9 0 0 "" nsv478997 1 25792224 25792224 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011964 M 9 0 0 "" nsv480055 1 25793302 25793302 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014238 M 9 0 0 "" nsv479415 1 25796775 25796775 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010782 M 9 0 0 "" nsv481294 1 25797504 25797504 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013438 M 9 0 0 "" esv3358130 1 25863340 25863371 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863684 M 185 1 0 MAN1C1 NA12005 esv3357351 1 25914152 25914950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692258 M 185 1 0 MAN1C1 NA19239 nsv834491 1 25925489 26113195 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444262,nssv1444273 M 95 0 2 AUNIP,LOC646471,MAN1C1,MIR3917,MTFR1L,PAQR7,SEPN1,STMN1 nsv545882 1 25940048 25994684 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711876 M 17421 0 1 MAN1C1 nsv947417 1 25954071 25959719 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2759055 M 97 1 0 MAN1C1 HGDP00998 nsv819900 1 25961529 25965424 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419585 M 2 1 0 MAN1C1 AK1 esv2116011 1 25966663 25967529 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4648407 M 1 0 1 MAN1C1 NA18507 esv3381476 1 25967452 25968650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692259 M 185 1 0 MAN1C1 NA19239 nsv460884 1 25977560 26090671 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537367 M 1557 0 1 AUNIP,LOC646471,MAN1C1,MTFR1L,PAQR7,SEPN1,STMN1 HGDP01023 nsv545883 1 25977560 26090671 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173801 M 17421 0 1 AUNIP,LOC646471,MAN1C1,MTFR1L,PAQR7,SEPN1,STMN1 HGDP01023 nsv7490 1 25996935 26042615 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6462 M 9 0 1 AUNIP,LOC646471,MTFR1L,SEPN1 NA12156 esv2353706 1 26007187 26007636 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4547374 M 1 0 1 SEPN1 NA18507 esv1998326 1 26021366 26022037 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4882212 M 1 0 1 LOC646471,MTFR1L NA18507 nsv834502 1 26033359 26186506 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444284 M 95 1 0 AUNIP,MIR3917,PAFAH2,PAQR7,STMN1 nsv822165 1 26035402 26035875 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423950 M 31 0 1 AUNIP NA18582 nsv945838 1 26086399 26091055 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764374,nssv1764363,nssv1764378,nssv1766713,nssv1766694,nssv1764346,nssv1764375,nssv1766710,nssv1766702,nssv1764348,nssv1766689,nssv1766712,nssv1766690,nssv1764344,nssv1766709,nssv1764360,nssv1766700,nssv1764389,nssv1766684,nssv1764390,nssv1766681,nssv1764350,nssv1766696,nssv1764361,nssv1766697,nssv1764338,nssv1766711,nssv1764337,nssv1766688,nssv1764341,nssv1766695,nssv1766705,nssv1766698,nssv1764384,nssv1766691,nssv1764336,nssv1766685,nssv1764359,nssv1764381,nssv1766715,nssv1766708,nssv1764367,nssv1764376,nssv1764357,nssv1766683,nssv1764391,nssv1766687,nssv1764355,nssv1764373,nssv1764333,nssv1766701,nssv1764343,nssv1766693,nssv1764340,nssv1766682,nssv1766706,nssv1764380,nssv1764347,nssv1766692,nssv1766714,nssv1766704,nssv1764387,nssv1764372,nssv1764365,nssv1766686,nssv1764385,nssv1764379,nssv1764331,nssv1764377,nssv1764370,nssv1766699,nssv1764342,nssv1764366,nssv1764335,nssv1764382,nssv1764358,nssv1764353,nssv1764352,nssv1764371,nssv1764388,nssv1764383,nssv1764369,nssv1764351,nssv1764356,nssv1766703,nssv1764345,nssv1764362,nssv1764332,nssv1764339,nssv1766707,nssv1764354,nssv1764349,nssv1764368,nssv1764364,nssv1766680,nssv1764334,nssv1764386 M 97 10 0 STMN1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv834513 1 26122058 26286463 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444296 M 95 1 0 EXTL1,PAFAH2,SLC30A2,TRIM63 nsv472827 1 26150342 26150342 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013002 M 9 1 0 "" NA18555 nsv7501 1 26186060 26219501 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4016 M 9 1 0 PAFAH2 NA12878 nsv508678 1 26250144 26305214 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622761 M 4 0 1 TRIM63 NA18994 nsv478347 1 26275378 26275378 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012956 M 9 1 0 "" NA18507 nsv511129 1 26322688 26340581 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626365 M 1 0 1 PDIK1L 1 nsv819393 1 26322882 26323584 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419064 M 2 0 1 PDIK1L AK1 nsv945839 1 26325838 26328719 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765402,nssv1765377,nssv1765396,nssv1765410,nssv1764398,nssv1765389,nssv1764401,nssv1764392,nssv1764400,nssv1765349,nssv1765399,nssv1765368,nssv1765398,nssv1765381,nssv1764412,nssv1765352,nssv1765344,nssv1765346,nssv1764399,nssv1765407,nssv1765393,nssv1765375,nssv1764409,nssv1765370,nssv1764411,nssv1765367,nssv1764397,nssv1765355,nssv1764394,nssv1765379,nssv1764407,nssv1765372,nssv1764413,nssv1765371,nssv1765340,nssv1765362,nssv1764393,nssv1765369,nssv1764402,nssv1765382,nssv1764408,nssv1765403,nssv1764405,nssv1765353,nssv1764406,nssv1765405,nssv1764410,nssv1765390,nssv1764403,nssv1765341,nssv1765345,nssv1765388,nssv1765395,nssv1765343,nssv1764404,nssv1764415,nssv1765397,nssv1765342,nssv1764395,nssv1765411,nssv1765347,nssv1765380,nssv1765401,nssv1765357,nssv1764414,nssv1765404,nssv1765394,nssv1765360,nssv1764396,nssv1765384,nssv1765400,nssv1765392,nssv1765406,nssv1765351,nssv1765376,nssv1765359,nssv1765412,nssv1765363,nssv1765408,nssv1765358,nssv1765365,nssv1765356,nssv1765354,nssv1765348,nssv1765387,nssv1765350,nssv1765378,nssv1765409,nssv1765385,nssv1765386,nssv1765374,nssv1765391,nssv1765383,nssv1765361,nssv1765366,nssv1765364,nssv1765373 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7512 1 26327011 26355920 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6471,nssv983 M 9 0 2 "" NA12156,NA19240 nsv822176 1 26328727 26337042 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434164,nssv1437934,nssv1437563,nssv1423951 M 31 4 0 "" NA18547,NA18570,NA18582,NA18951 dgv214n54 1 26329174 26336842 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545884,nsv545886,nsv545885 M 17421 0 8 "" nsv511685 1 26331902 26337511 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626324 M 1 0 1 "" 1 esv23014 1 26332157 26337219 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20260 M 40 23 0 "" NA06985,NA07037,NA07045,NA11931,NA11993,NA12004,NA12006,NA12239,NA12489,NA12749,NA12878,NA15510,NA18502,NA18517,NA18523,NA18858,NA18861,NA18916,NA19099,NA19114,NA19129,NA19190,NA19257 nsv498668 1 26332682 26337394 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585448 M 9 0 1 "" dgv215n54 1 26333039 26335980 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545887,nsv545893 M 17421 0 13 "" dgv216n54 1 26333039 26337092 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545890,nsv545888,nsv545894,nsv545898,nsv545896,nsv545897,nsv545891,nsv545892,nsv545895,nsv545889 M 17421 0 121 "" nsv821140 1 26333085 26337699 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420292 M 1 0 1 "" NA10851 nsv822187 1 26333085 26337699 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436333,nssv1428821,nssv1431801,nssv1423112,nssv1428020,nssv1421447,nssv1432052,nssv1427250,nssv1425491,nssv1430338,nssv1431066,nssv1437220,nssv1422365 M 31 0 13 "" AK10,AK12,AK16,AK18,AK20,AK4,AK8,NA18542,NA18552,NA18949,NA18972,NA18997,NA18999 nsv514923 1 26333144 26336748 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857939,nssv2857925,nssv2857934,nssv2857923,nssv2857947,nssv2857926,nssv2857959,nssv2857927,nssv2857937,nssv2858180,nssv2857943,nssv2857188,nssv2857938,nssv2857186,nssv2857940,nssv2858207,nssv2857949,nssv2857156,nssv2857941,nssv2858255,nssv2857957,nssv2858223,nssv2857929,nssv2858234,nssv2857945,nssv2858064,nssv2857954,nssv2858226,nssv2857953,nssv2858146,nssv2857962,nssv2857151,nssv2857931,nssv2858218,nssv2857936,nssv2857105,nssv2857955,nssv2858055,nssv2857956,nssv2857916,nssv2857932,nssv2857213,nssv2857933,nssv2857143,nssv2857950,nssv2858248,nssv2857965,nssv2858258,nssv2857961,nssv2858142,nssv2857960,nssv2857890,nssv2857942,nssv2858075,nssv2857948,nssv2858205,nssv2857964,nssv2858120,nssv2857951,nssv2858072,nssv2857952,nssv2858037,nssv2857935,nssv2858111,nssv2857966,nssv2858219,nssv2857958,nssv2857174,nssv2857963,nssv2857114,nssv2857946,nssv2857152,nssv2857944,nssv2857182,nssv2857930,nssv2858181,nssv2858090,nssv2857240,nssv2857894,nssv2858033,nssv2857905,nssv2858167,nssv2858119,nssv2857246,nssv2858257,nssv2858239,nssv2858215,nssv2857210,nssv2857910,nssv2858074,nssv2858056,nssv2857134,nssv2858202,nssv2858249,nssv2857190,nssv2858069,nssv2858150,nssv2858118,nssv2858238,nssv2858145,nssv2858227,nssv2858162,nssv2857898,nssv2857245,nssv2858095,nssv2858039,nssv2858041,nssv2857226,nssv2857241,nssv2858259,nssv2858086,nssv2857100,nssv2857163,nssv2858152,nssv2858096,nssv2857247,nssv2858101,nssv2858081,nssv2857101,nssv2858187,nssv2858070,nssv2857236,nssv2857205,nssv2857892,nssv2857887,nssv2857178,nssv2857229,nssv2857149,nssv2857107,nssv2857181,nssv2858213,nssv2858131,nssv2857211,nssv2858190,nssv2857115,nssv2857216,nssv2858236,nssv2857113,nssv2858170,nssv2857230,nssv2857146,nssv2857116,nssv2857914,nssv2857901,nssv2858171,nssv2858186,nssv2858045,nssv2857103,nssv2858079,nssv2858065,nssv2857232,nssv2857119,nssv2858244,nssv2857144,nssv2858085,nssv2858077,nssv2858217,nssv2858030,nssv2857102,nssv2857217,nssv2858147,nssv2858112,nssv2857109,nssv2858184,nssv2858136,nssv2857198,nssv2858115,nssv2857237,nssv2858105,nssv2858243,nssv2857227,nssv2857167,nssv2858242,nssv2858211,nssv2858177,nssv2857907,nssv2857242,nssv2858044,nssv2858173,nssv2857124,nssv2857902,nssv2857889,nssv2857235,nssv2857139,nssv2858098,nssv2858216,nssv2857193,nssv2857122,nssv2858137,nssv2857111,nssv2858051,nssv2857157,nssv2857215,nssv2858032,nssv2857132,nssv2857123,nssv2857108,nssv2858089,nssv2857135,nssv2858129,nssv2858068,nssv2858083,nssv2857201,nssv2858130,nssv2858156,nssv2858063,nssv2857127,nssv2857141,nssv2858088,nssv2858201,nssv2857897,nssv2858139,nssv2858160,nssv2857212,nssv2857206,nssv2857171,nssv2857118,nssv2857915,nssv2858208,nssv2857207,nssv2858161,nssv2857919,nssv2858220,nssv2858144,nssv2857148,nssv2858233,nssv2857154,nssv2858143,nssv2857184,nssv2858047,nssv2857140,nssv2858128,nssv2857196,nssv2857175,nssv2858040,nssv2858163,nssv2858151,nssv2858132,nssv2858155,nssv2858210,nssv2857200,nssv2858092,nssv2857909,nssv2858048,nssv2858245,nssv2858260,nssv2858071,nssv2858241,nssv2858189,nssv2858232,nssv2857166,nssv2857187,nssv2858076,nssv2858182,nssv2858116,nssv2858046,nssv2857195,nssv2858035,nssv2857248,nssv2858225,nssv2858174,nssv2857179,nssv2857899,nssv2857912,nssv2858206,nssv2857183,nssv2858099,nssv2858168,nssv2857913,nssv2858134,nssv2858057,nssv2858049,nssv2857203,nssv2858066,nssv2858195,nssv2858108,nssv2857121,nssv2857112,nssv2857238,nssv2858188,nssv2857903,nssv2857228,nssv2857208,nssv2857126,nssv2858124,nssv2858082,nssv2858164,nssv2857225,nssv2858179,nssv2858221,nssv2857153,nssv2858203,nssv2857204,nssv2857131,nssv2857177,nssv2858250,nssv2857895,nssv2858078,nssv2858231,nssv2858200,nssv2857117,nssv2857233,nssv2857886,nssv2858031,nssv2857173,nssv2857191,nssv2858199,nssv2857133,nssv2858185,nssv2857244,nssv2858209,nssv2858034,nssv2857891,nssv2858091,nssv2858222,nssv2857219,nssv2857180,nssv2858038,nssv2858237,nssv2857176,nssv2857885,nssv2857172,nssv2857928,nssv2858196,nssv2857165,nssv2857170,nssv2858052,nssv2858247,nssv2857194,nssv2858230,nssv2857920,nssv2857120,nssv2857202,nssv2858229,nssv2858133,nssv2858175,nssv2858183,nssv2857161,nssv2857904,nssv2858053,nssv2858093,nssv2857185,nssv2858050,nssv2858141,nssv2858253,nssv2858121,nssv2858117,nssv2858059,nssv2858198,nssv2858084,nssv2858194,nssv2858029,nssv2857917,nssv2857169,nssv2858254,nssv2858261,nssv2858153,nssv2858212,nssv2857900,nssv2857209,nssv2858158,nssv2858043,nssv2858172,nssv2857136,nssv2857138,nssv2858042,nssv2857189,nssv2858073,nssv2858094,nssv2857137,nssv2858228,nssv2858165,nssv2857158,nssv2858126,nssv2857159,nssv2858148,nssv2857145,nssv2858080,nssv2858087,nssv2858123,nssv2857922,nssv2858178,nssv2857222,nssv2858192,nssv2858235,nssv2858135,nssv2857199,nssv2857150,nssv2858224,nssv2858197,nssv2858154,nssv2857104,nssv2858110,nssv2858122,nssv2858240,nssv2857223,nssv2858138,nssv2857155,nssv2857168,nssv2858191,nssv2858103,nssv2857231,nssv2857218,nssv2857130,nssv2857908,nssv2858169,nssv2858114,nssv2858159,nssv2858125,nssv2857220,nssv2858157,nssv2858204,nssv2857147,nssv2857221,nssv2858097,nssv2857243,nssv2858127,nssv2858058,nssv2858109,nssv2858060,nssv2858193,nssv2858256,nssv2857106,nssv2857906,nssv2857918,nssv2857921,nssv2858061,nssv2858104,nssv2857888,nssv2857197,nssv2857160,nssv2858107,nssv2858166,nssv2858067,nssv2858176,nssv2857224,nssv2858214,nssv2857110,nssv2857192,nssv2858036,nssv2858102,nssv2857164,nssv2858054,nssv2857911,nssv2858106,nssv2857234,nssv2857214,nssv2857125,nssv2858251,nssv2858062,nssv2858149,nssv2858100,nssv2857128,nssv2857924,nssv2857162,nssv2858113,nssv2857896,nssv2857142,nssv2857239,nssv2858140,nssv2857129,nssv2858246,nssv2857893,nssv2858252 M 2366 460 4 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10852,NA10855,NA10857,NA10859,NA10860,NA10863,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12044,NA12045,NA12056,NA12058,NA12145,NA12146,NA12154,NA12155,NA12156,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18488,NA18489,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19114,NA19115,NA19117,NA19118,NA19119,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21454,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21522,NA21523,NA21524,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 dgv217n54 1 26334109 26337092 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545900,nsv545899,nsv545902,nsv545901 M 17421 0 16 "" dgv218n54 1 26335166 26336842 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545905,nsv545903,nsv545904 M 17421 0 6 "" nsv545906 1 26335708 26337092 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712041 M 17421 0 1 "" esv2202284 1 26343585 26343998 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4736067 M 1 0 1 "" NA18507 nsv1002191 1 26348108 26418238 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464989 M 29084 1 0 CATSPER4,CNKSR1,FAM110D,ZNF593 esv3399845 1 26353885 26353894 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863685 M 185 1 0 "" NA12005 esv9535 1 26362204 26362970 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31976 M 1 0 0 "" esv4795 1 26362364 26362929 CNV loss Wang_et_al_2008 18987735 Sequencing essv27236 M 1 0 1 "" YH nsv160685 1 26362400 26362725 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179263 M 24 "" esv1290851 1 26362410 26362736 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3833066 M 2 0 1 "" HuRef nsv473502 1 26456921 26456921 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012680 M 9 1 0 CEP85 NA19129 esv1007945 1 26544094 26544144 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584480 M 3 0 1 AIM1L HuRef esv1693475 1 26544109 26544160 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3874525 M 2 0 1 AIM1L HuRef esv993255 1 26544116 26544166 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572032 M 3 0 1 AIM1L HuRef nsv545907 1 26551628 26569213 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712042 M 17421 0 1 AIM1L,ZNF683 nsv1014791 1 26576917 26619399 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478434 M 29084 1 0 LIN28A esv1056005 1 26598890 26598890 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3860909 M 2 1 0 "" HuRef esv1539325 1 26598896 26598896 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3612388 M 2 1 0 "" HuRef nsv945840 1 26625417 26628515 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765429,nssv1765451,nssv1765431,nssv1765461,nssv1765417,nssv1765500,nssv1765414,nssv1765484,nssv1765442,nssv1765501,nssv1765415,nssv1765458,nssv1765494,nssv1765483,nssv1765495,nssv1765463,nssv1765427,nssv1765481,nssv1765441,nssv1765447,nssv1765430,nssv1765506,nssv1765420,nssv1765457,nssv1765496,nssv1765465,nssv1765418,nssv1765486,nssv1765419,nssv1765488,nssv1765421,nssv1765446,nssv1765437,nssv1765467,nssv1765435,nssv1765436,nssv1765434,nssv1765443,nssv1765416,nssv1765440,nssv1765499,nssv1765466,nssv1765426,nssv1765474,nssv1765432,nssv1765449,nssv1765423,nssv1765472,nssv1765433,nssv1765509,nssv1765444,nssv1765413,nssv1765493,nssv1765489,nssv1765425,nssv1765507,nssv1765497,nssv1765479,nssv1765424,nssv1765464,nssv1765490,nssv1765478,nssv1765492,nssv1765468,nssv1765498,nssv1765453,nssv1765422,nssv1765459,nssv1765491,nssv1765450,nssv1765428,nssv1765454,nssv1765482,nssv1765502,nssv1765439,nssv1765469,nssv1765438,nssv1765487,nssv1765504,nssv1765485,nssv1765452,nssv1765476,nssv1765448,nssv1765477,nssv1765473,nssv1765460,nssv1765508,nssv1765462,nssv1765471,nssv1765480,nssv1765455,nssv1765470,nssv1765503,nssv1765475,nssv1765456,nssv1765505,nssv1765445 M 97 10 0 LIN28A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945841 1 26651563 26655142 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765511,nssv1765553,nssv1765513,nssv1765549,nssv1765517,nssv1765579,nssv1765531,nssv1765560,nssv1765524,nssv1765559,nssv1765528,nssv1765599,nssv1765589,nssv1765605,nssv1765532,nssv1765572,nssv1765514,nssv1765570,nssv1765521,nssv1765557,nssv1765595,nssv1765580,nssv1765593,nssv1765573,nssv1765516,nssv1765563,nssv1765539,nssv1765537,nssv1765591,nssv1765552,nssv1765541,nssv1765586,nssv1765527,nssv1765603,nssv1765530,nssv1765581,nssv1765518,nssv1765542,nssv1765538,nssv1765562,nssv1765534,nssv1765602,nssv1765592,nssv1765558,nssv1765587,nssv1765600,nssv1765515,nssv1765583,nssv1765519,nssv1765540,nssv1765526,nssv1765565,nssv1765529,nssv1765543,nssv1765596,nssv1765548,nssv1765523,nssv1765585,nssv1765512,nssv1765533,nssv1765520,nssv1765510,nssv1765525,nssv1765571,nssv1765590,nssv1765555,nssv1765522,nssv1765569,nssv1765588,nssv1765546,nssv1765594,nssv1765576,nssv1765606,nssv1765567,nssv1765578,nssv1765554,nssv1765544,nssv1765574,nssv1765561,nssv1765564,nssv1765604,nssv1765597,nssv1765550,nssv1765535,nssv1765566,nssv1765584,nssv1765575,nssv1765556,nssv1765568,nssv1765536,nssv1765598,nssv1765582,nssv1765547,nssv1765551,nssv1765577,nssv1765601,nssv1765545 M 97 10 0 DHDDS HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947418 1 26669692 26676358 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761713 M 97 1 0 DHDDS,HMGN2 HGDP00998 nsv945842 1 26673796 26675311 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766301,nssv1766266,nssv1765616,nssv1766293,nssv1765625,nssv1766291,nssv1765629,nssv1765643,nssv1765623,nssv1766296,nssv1765609,nssv1766280,nssv1766307,nssv1766268,nssv1765611,nssv1765632,nssv1766308,nssv1766264,nssv1765621,nssv1766273,nssv1765622,nssv1766319,nssv1765613,nssv1766317,nssv1765608,nssv1765640,nssv1766306,nssv1765644,nssv1765638,nssv1766288,nssv1765624,nssv1765642,nssv1765627,nssv1765646,nssv1765636,nssv1765639,nssv1766302,nssv1766277,nssv1765635,nssv1766286,nssv1766304,nssv1766265,nssv1766303,nssv1766295,nssv1765628,nssv1766314,nssv1765615,nssv1766267,nssv1765631,nssv1766275,nssv1765610,nssv1766318,nssv1765614,nssv1766310,nssv1765626,nssv1766316,nssv1766309,nssv1765633,nssv1765612,nssv1765634,nssv1765620,nssv1766289,nssv1765617,nssv1766278,nssv1765618,nssv1766297,nssv1766300,nssv1766271,nssv1765619,nssv1766270,nssv1766305,nssv1766299,nssv1766274,nssv1766312,nssv1766294,nssv1766313,nssv1766292,nssv1766282,nssv1766279,nssv1766272,nssv1765641,nssv1766281,nssv1766290,nssv1766287,nssv1766284,nssv1766311,nssv1765645,nssv1766283,nssv1765607,nssv1765630,nssv1765647,nssv1766285,nssv1766276,nssv1766269,nssv1765637,nssv1766315,nssv1766298 M 97 10 0 HMGN2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545908 1 26708378 26860613 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712043 M 17421 0 1 MIR1976,RPS6KA1 nsv945843 1 26718298 26722007 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766348,nssv1766353,nssv1765289,nssv1765281,nssv1766335,nssv1766382,nssv1766344,nssv1765279,nssv1765287,nssv1766369,nssv1766321,nssv1765296,nssv1766338,nssv1765294,nssv1765290,nssv1766379,nssv1766324,nssv1766354,nssv1766336,nssv1765298,nssv1766334,nssv1766347,nssv1766332,nssv1766380,nssv1766351,nssv1765302,nssv1766323,nssv1766377,nssv1765284,nssv1766373,nssv1766342,nssv1766368,nssv1766328,nssv1765275,nssv1766327,nssv1766350,nssv1766337,nssv1766366,nssv1766339,nssv1766365,nssv1766333,nssv1765297,nssv1766325,nssv1766352,nssv1765292,nssv1766345,nssv1765293,nssv1766359,nssv1766340,nssv1766385,nssv1766330,nssv1766370,nssv1765286,nssv1766384,nssv1766331,nssv1766361,nssv1766341,nssv1766363,nssv1766329,nssv1765299,nssv1765288,nssv1765278,nssv1766349,nssv1766387,nssv1766322,nssv1766378,nssv1765285,nssv1766358,nssv1765291,nssv1765300,nssv1766326,nssv1766374,nssv1766346,nssv1766357,nssv1766386,nssv1766376,nssv1765277,nssv1766383,nssv1766356,nssv1765280,nssv1765282,nssv1766362,nssv1766372,nssv1766375,nssv1766355,nssv1766364,nssv1765301,nssv1766367,nssv1766371,nssv1765283,nssv1765276,nssv1765303,nssv1766360,nssv1765295,nssv1766343,nssv1766381,nssv1766320 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv526179 1 26733868 26778154 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702441 M 2026 1 0 MIR1976,RPS6KA1 esv3409657 1 26735352 26738450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692260 M 185 1 0 RPS6KA1 NA19239 esv8356 1 26794293 26794450 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30797 M 1 0 0 "" esv3893192 1 26796895 26854066 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25786976,essv25785057 M 3017 0 2 "" nsv7175 1 26797061 26886029 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4025,nssv10774,nssv5431,nssv1994,nssv994,nssv6489,nssv6480,nssv5440,nssv9811 M 9 0 0 "" NA12156,NA12878,NA18507,NA18555,NA18956,NA19129,NA19240 esv994838 1 26837438 26849722 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564799 M 3 0 0 "" HuRef dgv2n50 1 26838846 26847109 OTHER inversion Arlt_et_al_2011 21212237 Sequencing,SNP array nsv513634,nsv513635 M 1 0 0 "" 1 nsv499540 1 26839406 26845950 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585485 M 9 0 0 "" dgv72e59 1 26839510 26846713 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3349952,esv3333532 M 185 0 0 "" NA12878 esv1761897 1 26840409 26845806 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4032934 M 2 0 0 "" HuRef nsv822198 1 26843335 26845358 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1427251 M 31 1 0 "" AK8 esv275548 1 26869653 26898376 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586060 M 1250 0 1 ARID1A esv1007463 1 26882488 26887236 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565285 M 3 1 0 "" HuRef nsv1000012 1 26914047 27340606 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700633 M 29084 1 0 ARID1A,C1orf172,FAM46B,GPATCH3,GPN2,NR0B2,NUDC,PIGV,SFN,SLC9A1,TRNP1,ZDHHC18 nsv7523 1 26940776 26985618 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8873 M 9 0 1 ARID1A NA12156 nsv820211 1 26999996 27023596 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418692 M 2 0 1 "" AK1 nsv834524 1 27029262 27193580 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1444373,nssv1444307,nssv1444329,nssv1444362,nssv1444340,nssv1444351,nssv1444318 M 95 2 5 C1orf172,GPATCH3,GPN2,NR0B2,NUDC,SFN,TRNP1,ZDHHC18 nsv7535 1 27056171 27076901 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9264 M 9 1 0 SFN NA18517 nsv508689 1 27111540 27158584 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620126 M 4 0 1 C1orf172,NR0B2,NUDC NA15510 esv1159948 1 27126362 27126362 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4022881 M 2 1 0 NUDC HuRef nsv945844 1 27174635 27185957 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766429,nssv1766415,nssv1765320,nssv1766414,nssv1765306,nssv1766419,nssv1765318,nssv1766413,nssv1765322,nssv1766416,nssv1765317,nssv1766390,nssv1765332,nssv1766392,nssv1765308,nssv1766405,nssv1766437,nssv1766408,nssv1765325,nssv1766427,nssv1765311,nssv1766401,nssv1765305,nssv1765304,nssv1765307,nssv1766410,nssv1765313,nssv1765337,nssv1765321,nssv1765334,nssv1765312,nssv1765329,nssv1766435,nssv1766421,nssv1765328,nssv1766417,nssv1766433,nssv1766397,nssv1765309,nssv1766409,nssv1765314,nssv1766422,nssv1766431,nssv1766444,nssv1766430,nssv1766398,nssv1765326,nssv1766443,nssv1765323,nssv1766448,nssv1765335,nssv1765330,nssv1766438,nssv1766425,nssv1766436,nssv1766412,nssv1765315,nssv1766395,nssv1765316,nssv1766440,nssv1765319,nssv1766442,nssv1765324,nssv1766391,nssv1765310,nssv1766393,nssv1766434,nssv1766447,nssv1766432,nssv1765327,nssv1765333,nssv1766420,nssv1766402,nssv1766399,nssv1766424,nssv1765331,nssv1765339,nssv1766418,nssv1766445,nssv1766400,nssv1766389,nssv1765338,nssv1766446,nssv1766407,nssv1766426,nssv1765336,nssv1766394,nssv1766388,nssv1766406,nssv1766428,nssv1766396,nssv1766441,nssv1766423,nssv1766403,nssv1766439,nssv1766404,nssv1766411 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv834535 1 27205663 27379004 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1444395,nssv1444384 M 95 1 1 FAM46B,SLC9A1 nsv1005755 1 27219364 27297480 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481726 M 29084 1 0 "" esv2763082 1 27221530 27280721 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7022410 M 1109 1 0 "" SW_0113 nsv545909 1 27240280 27276561 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712044 M 17421 0 1 "" nsv509058 1 27267926 27308443 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623778 M 4 1 0 SLC9A1 NA18994 esv2498789 1 27285352 27285762 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5196385 M 1 1 0 "" NA18507 esv3336032 1 27306104 27306304 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652079 M 185 1 0 SLC9A1 NA19240 esv28309 1 27337400 27338705 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14516 M 40 0 2 SLC9A1 NA19108,NA19114 esv1220296 1 27359590 27360237 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3949051 M 2 0 1 "" HuRef nsv471845 1 27361043 27361043 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014776 M 9 1 0 "" NA18555 nsv945846 1 27363412 27410385 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766478,nssv1766501,nssv1766455,nssv1757025,nssv1766467,nssv1766483,nssv1757042,nssv1766484,nssv1766450,nssv1757046,nssv1766457,nssv1766472,nssv1766464,nssv1766500,nssv1757039,nssv1766497,nssv1766453,nssv1766508,nssv1757040,nssv1766496,nssv1757034,nssv1757044,nssv1766465,nssv1766489,nssv1766469,nssv1757027,nssv1766466,nssv1766507,nssv1766458,nssv1766493,nssv1766463,nssv1766498,nssv1766451,nssv1766502,nssv1757043,nssv1757051,nssv1766454,nssv1766481,nssv1766473,nssv1766487,nssv1757041,nssv1766449,nssv1766462,nssv1757029,nssv1766456,nssv1757047,nssv1766452,nssv1757053,nssv1766471,nssv1757028,nssv1766460,nssv1766511,nssv1766470,nssv1766510,nssv1766461,nssv1766505,nssv1766480,nssv1766482,nssv1757036,nssv1757026,nssv1766468,nssv1766512,nssv1766477,nssv1766494,nssv1757035,nssv1766509,nssv1757038,nssv1766495,nssv1766459,nssv1766514,nssv1757037,nssv1766506,nssv1766479,nssv1766490,nssv1766488,nssv1757045,nssv1766492,nssv1757031,nssv1766474,nssv1766515,nssv1757050,nssv1757049,nssv1757024,nssv1757032,nssv1766476,nssv1757030,nssv1766504,nssv1766499,nssv1766475,nssv1757052,nssv1757033,nssv1766491,nssv1757048,nssv1766513,nssv1766503,nssv1766486,nssv1766485 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1010793 1 27413801 27481105 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477431,nssv3475703 M 29084 2 0 WDTC1 nsv526051 1 27483333 27644596 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702288 M 2026 1 0 CD164L2,FCN3,GPR3,LOC644961,MAP3K6,SYTL1,TMEM222,WASF2,WDTC1 nsv945849 1 27510818 27513501 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757067,nssv1757121,nssv1757070,nssv1757103,nssv1757071,nssv1757098,nssv1757137,nssv1757130,nssv1757139,nssv1757149,nssv1757076,nssv1757119,nssv1757063,nssv1757129,nssv1757078,nssv1757086,nssv1757083,nssv1757145,nssv1757055,nssv1757087,nssv1757065,nssv1757090,nssv1757085,nssv1757127,nssv1757072,nssv1757093,nssv1757057,nssv1757080,nssv1757064,nssv1757120,nssv1757138,nssv1757096,nssv1757140,nssv1757111,nssv1757136,nssv1757122,nssv1757060,nssv1757105,nssv1757131,nssv1757144,nssv1757132,nssv1757143,nssv1757069,nssv1757114,nssv1757075,nssv1757108,nssv1757058,nssv1757113,nssv1757074,nssv1757106,nssv1757082,nssv1757110,nssv1757073,nssv1757142,nssv1757066,nssv1757126,nssv1757133,nssv1757077,nssv1757061,nssv1757054,nssv1757134,nssv1757148,nssv1757068,nssv1757150,nssv1757059,nssv1757109,nssv1757135,nssv1757095,nssv1757056,nssv1757101,nssv1757062,nssv1757123,nssv1757124,nssv1757116,nssv1757094,nssv1757088,nssv1757089,nssv1757125,nssv1757115,nssv1757079,nssv1757118,nssv1757147,nssv1757100,nssv1757104,nssv1757084,nssv1757091,nssv1757099,nssv1757081,nssv1757097,nssv1757112,nssv1757141,nssv1757128,nssv1757146,nssv1757107,nssv1757117,nssv1757092,nssv1757102 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945850 1 27523538 27527914 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757162,nssv1757227,nssv1757167,nssv1757194,nssv1757168,nssv1757212,nssv1757180,nssv1757218,nssv1757173,nssv1757222,nssv1757232,nssv1757201,nssv1757152,nssv1757223,nssv1757175,nssv1757213,nssv1757169,nssv1757202,nssv1757171,nssv1757209,nssv1757235,nssv1757188,nssv1757237,nssv1757207,nssv1757179,nssv1757226,nssv1757182,nssv1757196,nssv1757153,nssv1757204,nssv1757233,nssv1757214,nssv1757228,nssv1757191,nssv1757229,nssv1757238,nssv1757234,nssv1757239,nssv1757172,nssv1757216,nssv1757160,nssv1757199,nssv1757170,nssv1757225,nssv1757164,nssv1757177,nssv1757155,nssv1757187,nssv1757154,nssv1757243,nssv1757230,nssv1757200,nssv1757158,nssv1757183,nssv1757165,nssv1757242,nssv1757161,nssv1757193,nssv1757231,nssv1757190,nssv1757156,nssv1757246,nssv1757163,nssv1757184,nssv1757159,nssv1757219,nssv1757157,nssv1757217,nssv1757166,nssv1757240,nssv1757236,nssv1757220,nssv1757241,nssv1757210,nssv1757189,nssv1757151,nssv1757205,nssv1757224,nssv1757211,nssv1757208,nssv1757244,nssv1757195,nssv1757247,nssv1757192,nssv1757203,nssv1757215,nssv1757174,nssv1757185,nssv1757206,nssv1757198,nssv1757186,nssv1757178,nssv1757245,nssv1757197,nssv1757181,nssv1757221,nssv1757176 M 97 10 0 LOC644961,TMEM222 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv516766 1 27534822 27604238 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv670705,nssv654983 M 2026 0 2 CD164L2,FCN3,GPR3,MAP3K6,SYTL1,TMEM222,WASF2 esv1006916 1 27565654 27579596 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565148 M 3 0 1 CD164L2,FCN3,MAP3K6 HuRef esv3345943 1 27597552 27600850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692271 M 185 1 0 "" NA19239 dgv14n27 1 27644596 27817946 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460895,nsv460906 M 1557 0 2 AHDC1,FGR,WASF2 1780854103_A,HGDP00861 esv2763086 1 27645135 27721887 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7022521 M 1109 1 0 WASF2 SW_1162 dgv219n54 1 27658921 27817946 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545911,nsv545912,nsv545910 M 17421 0 3 AHDC1,FGR,WASF2 HGDP00850,HGDP00861 esv2459986 1 27675886 27677456 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5207086 M 1 0 1 WASF2 NA18507 esv2248480 1 27676502 27677228 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4593459 M 1 0 1 WASF2 NA18507 esv4796 1 27676654 27677123 CNV loss Wang_et_al_2008 18987735 Sequencing essv27237 M 1 0 1 WASF2 YH esv2049917 1 27688425 27688740 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4809581 M 1 0 1 WASF2 NA18507 nsv159932 1 27688490 27688572 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178510 M 24 WASF2 nsv460917 1 27721887 27810043 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537395 M 1557 0 1 AHDC1 HGDP00890 dgv220n54 1 27721887 27830832 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545915,nsv545914,nsv545913 M 17421 0 4 AHDC1,FGR HGDP00890 nsv522842 1 27721887 27884441 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698494 M 2026 1 0 AHDC1,FGR,IFI6 nsv520790 1 27731623 27749069 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697612 M 2026 0 1 AHDC1 esv6834 1 27746629 27746779 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29275 M 1 0 0 AHDC1 nsv476781 1 27746930 27746930 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014802 M 9 1 0 AHDC1 NA12878 nsv508700 1 27755741 27852783 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620127 M 4 0 1 AHDC1,FGR NA15510 nsv1014991 1 27759600 27827972 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700634 M 29084 1 0 AHDC1,FGR esv28987 1 27794010 27794965 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17459 M 40 0 1 AHDC1 NA12006 esv3375492 1 27794052 27795350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692272 M 185 1 0 AHDC1 NA19239 esv3938 1 27807843 27808388 CNV loss Wang_et_al_2008 18987735 Sequencing essv26379 M 1 0 1 "" YH esv2527619 1 27807978 27808106 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5200455 M 1 0 1 "" NA18507 nsv945851 1 27848450 27849600 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757265,nssv1757312,nssv1757259,nssv1758262,nssv1757260,nssv1757294,nssv1757264,nssv1757295,nssv1757263,nssv1757283,nssv1757325,nssv1758266,nssv1757329,nssv1757303,nssv1757262,nssv1757275,nssv1757250,nssv1758261,nssv1757258,nssv1757278,nssv1757270,nssv1757318,nssv1757249,nssv1757291,nssv1757266,nssv1758260,nssv1758256,nssv1757273,nssv1758257,nssv1757282,nssv1758258,nssv1757306,nssv1757326,nssv1757310,nssv1757272,nssv1757285,nssv1757267,nssv1757309,nssv1757330,nssv1757299,nssv1757268,nssv1757315,nssv1757254,nssv1757319,nssv1757269,nssv1757311,nssv1757252,nssv1757293,nssv1757261,nssv1757301,nssv1757327,nssv1757298,nssv1757277,nssv1757317,nssv1757331,nssv1757280,nssv1757257,nssv1757286,nssv1757255,nssv1757296,nssv1757328,nssv1757274,nssv1757279,nssv1758264,nssv1757276,nssv1758265,nssv1757253,nssv1757313,nssv1757256,nssv1757304,nssv1757251,nssv1757284,nssv1757288,nssv1758267,nssv1757297,nssv1757289,nssv1757248,nssv1757271,nssv1757324,nssv1757287,nssv1757307,nssv1757323,nssv1757314,nssv1757320,nssv1757290,nssv1757281,nssv1758259,nssv1758268,nssv1757321,nssv1757316,nssv1757292,nssv1757308,nssv1758263,nssv1757302,nssv1757305,nssv1757300,nssv1757322 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3303011 1 27851877 27852059 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731701,essv7737696,essv7736153,essv7736679,essv7736546 M 185 5 0 "" NA12828,NA18582,NA18943,NA19005,NA19093 nsv160061 1 27852023 27852023 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178639 M 24 "" esv3434332 1 27885052 27887150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692273 M 185 1 0 "" NA19239 nsv476742 1 27904377 27904377 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016655 M 9 1 0 "" NA12878 nsv509069 1 28016558 28105054 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621088 M 4 1 0 PPP1R8,RPA2,SCARNA1,STX12,THEMIS2 NA15510 nsv947419 1 28016999 28023579 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2757611 M 97 1 0 STX12 HGDP00998 nsv511686 1 28051801 28054617 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626325 M 1 0 1 "" 1 nsv160741 1 28073149 28074083 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179319 M 24 THEMIS2 nsv512728 1 28077278 28077556 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625353 M 1 1 0 THEMIS2 1 esv3446306 1 28077432 28078250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652080 M 185 1 0 THEMIS2 NA19240 esv2400943 1 28120208 28120877 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4647745 M 1 0 1 "" NA18507 esv6007 1 28120280 28120930 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28448 M 1 0 0 "" esv3840 1 28120309 28120757 CNV loss Wang_et_al_2008 18987735 Sequencing essv26281 M 1 0 1 "" YH esv1132135 1 28120394 28120703 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4106955 M 2 0 1 "" HuRef nsv945852 1 28166408 28167521 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757714,nssv1757674,nssv1757654,nssv1757706,nssv1757666,nssv1757686,nssv1757653,nssv1757690,nssv1757650,nssv1757698,nssv1757715,nssv1757701,nssv1757645,nssv1757707,nssv1757659,nssv1757703,nssv1757722,nssv1757699,nssv1757643,nssv1757672,nssv1757721,nssv1757731,nssv1757718,nssv1757708,nssv1758270,nssv1757696,nssv1757665,nssv1757713,nssv1758271,nssv1757732,nssv1757651,nssv1757662,nssv1757655,nssv1757671,nssv1757640,nssv1757733,nssv1757649,nssv1757693,nssv1757652,nssv1757725,nssv1757657,nssv1757664,nssv1757719,nssv1757669,nssv1757656,nssv1757709,nssv1757658,nssv1757680,nssv1757644,nssv1757675,nssv1757720,nssv1757729,nssv1757661,nssv1757681,nssv1757723,nssv1757676,nssv1757668,nssv1757678,nssv1757647,nssv1757728,nssv1757641,nssv1757673,nssv1757717,nssv1757724,nssv1757642,nssv1757702,nssv1757648,nssv1757712,nssv1757646,nssv1757689,nssv1757716,nssv1758269,nssv1757695,nssv1757663,nssv1757685,nssv1757679,nssv1757700,nssv1757697,nssv1757726,nssv1757682,nssv1757704,nssv1757692,nssv1757670,nssv1757691,nssv1757705,nssv1757677,nssv1757683,nssv1757710,nssv1757688,nssv1757684,nssv1757687,nssv1757711,nssv1757730,nssv1757667,nssv1757727,nssv1757694,nssv1757660 M 97 10 0 XKR8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2255639 1 28200372 28200819 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4919567 M 1 0 1 EYA3 NA18507 esv2641492 1 28200543 28200642 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5244068 M 1 0 1 EYA3 NA18507 nsv998557 1 28201495 28275683 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479185 M 29084 1 0 EYA3 nsv947420 1 28226711 28231786 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2760201 M 97 1 0 EYA3 HGDP00998 nsv945853 1 28294245 28295475 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757753,nssv1757807,nssv1757817,nssv1757775,nssv1757812,nssv1757808,nssv1757765,nssv1757784,nssv1757737,nssv1757782,nssv1757762,nssv1757824,nssv1757751,nssv1757803,nssv1757750,nssv1757734,nssv1757747,nssv1757781,nssv1757746,nssv1757798,nssv1757740,nssv1757800,nssv1757819,nssv1757779,nssv1757736,nssv1757791,nssv1757756,nssv1757787,nssv1757742,nssv1757780,nssv1757754,nssv1757757,nssv1757818,nssv1757796,nssv1757735,nssv1757793,nssv1757749,nssv1757764,nssv1757752,nssv1757769,nssv1757745,nssv1757795,nssv1757763,nssv1757785,nssv1757815,nssv1757827,nssv1757743,nssv1757797,nssv1757816,nssv1757805,nssv1757758,nssv1757783,nssv1757748,nssv1757790,nssv1757744,nssv1757804,nssv1757755,nssv1757789,nssv1757811,nssv1757802,nssv1757814,nssv1757774,nssv1757738,nssv1757828,nssv1757739,nssv1757806,nssv1757820,nssv1757830,nssv1757741,nssv1757759,nssv1757813,nssv1757829,nssv1757822,nssv1757771,nssv1757761,nssv1757792,nssv1757826,nssv1757810,nssv1757825,nssv1757768,nssv1757772,nssv1757799,nssv1757767,nssv1757801,nssv1757821,nssv1757773,nssv1757809,nssv1757766,nssv1757778,nssv1757770,nssv1757777,nssv1757786,nssv1757776,nssv1757788,nssv1757823,nssv1757760,nssv1757794 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3359002 1 28348752 28350250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692280 M 185 1 0 PTAFR NA19239 nsv7546 1 28364799 28382553 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8875 M 9 0 1 PTAFR NA12156 esv3370107 1 28381129 28381129 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740958 M 185 1 0 PTAFR NA19240 nsv473375 1 28386281 28386281 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017047 M 9 1 0 PTAFR NA19129 nsv545916 1 28407820 28823449 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712049 M 17421 1 0 ATPIF1,DNAJC8,MED18,PHACTR4,RAB42,RCC1,SESN2,SNHG12,SNHG3,SNORA16A,SNORA44,SNORA61,SNORD99,TAF12,TRNAU1AP nsv945854 1 28415656 28418176 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757850,nssv1757861,nssv1757834,nssv1757883,nssv1757844,nssv1757918,nssv1757848,nssv1757906,nssv1757855,nssv1757867,nssv1757847,nssv1757903,nssv1757859,nssv1757863,nssv1757837,nssv1757881,nssv1757853,nssv1757894,nssv1757862,nssv1757920,nssv1757851,nssv1757886,nssv1757832,nssv1757873,nssv1757915,nssv1757864,nssv1757839,nssv1757905,nssv1757860,nssv1757891,nssv1757841,nssv1757857,nssv1757840,nssv1757831,nssv1757849,nssv1757854,nssv1757913,nssv1757897,nssv1757912,nssv1757871,nssv1757909,nssv1757899,nssv1757917,nssv1757879,nssv1757910,nssv1757904,nssv1757852,nssv1757907,nssv1757846,nssv1757878,nssv1757833,nssv1757888,nssv1757842,nssv1757876,nssv1757914,nssv1757890,nssv1757836,nssv1757900,nssv1757911,nssv1757877,nssv1757835,nssv1757925,nssv1757843,nssv1757921,nssv1757845,nssv1757919,nssv1757908,nssv1757885,nssv1757838,nssv1757884,nssv1757916,nssv1757895,nssv1757866,nssv1757901,nssv1757882,nssv1757893,nssv1757902,nssv1757880,nssv1757892,nssv1757865,nssv1757870,nssv1757896,nssv1757887,nssv1757858,nssv1757923,nssv1757926,nssv1757869,nssv1757868,nssv1757927,nssv1757872,nssv1757874,nssv1757924,nssv1757856,nssv1757898,nssv1757889,nssv1757922,nssv1757875 M 97 10 0 DNAJC8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545917 1 28436866 28522964 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712050 M 17421 0 1 ATPIF1,SESN2 nsv819729 1 28437053 28444819 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419841 M 2 0 1 ATPIF1 AK1 nsv545918 1 28443393 28480203 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712051 M 17421 0 1 SESN2 esv994212 1 28469991 28480057 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564064 M 3 0 1 SESN2 HuRef esv2452579 1 28493653 28495158 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5173712 M 1 0 1 "" NA18507 esv1987510 1 28494019 28494439 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4722951 M 1 0 1 "" NA18507 nsv945855 1 28509876 28513227 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757947,nssv1758596,nssv1758622,nssv1758595,nssv1758564,nssv1758570,nssv1758625,nssv1758631,nssv1757930,nssv1758584,nssv1757944,nssv1758577,nssv1758629,nssv1758587,nssv1757931,nssv1758615,nssv1757941,nssv1758581,nssv1757945,nssv1758579,nssv1757939,nssv1758605,nssv1758575,nssv1758599,nssv1758621,nssv1758604,nssv1758572,nssv1758600,nssv1758566,nssv1758574,nssv1758630,nssv1758610,nssv1757936,nssv1758603,nssv1757929,nssv1758594,nssv1758628,nssv1758586,nssv1757942,nssv1758567,nssv1757934,nssv1758582,nssv1757937,nssv1758571,nssv1757946,nssv1758592,nssv1758626,nssv1758619,nssv1758573,nssv1758614,nssv1757938,nssv1758583,nssv1758623,nssv1758640,nssv1758565,nssv1758608,nssv1758627,nssv1758576,nssv1758568,nssv1758606,nssv1757940,nssv1758601,nssv1757933,nssv1758609,nssv1757935,nssv1758635,nssv1757932,nssv1758589,nssv1757943,nssv1758578,nssv1758624,nssv1758588,nssv1758620,nssv1758639,nssv1758590,nssv1758612,nssv1758580,nssv1758591,nssv1758585,nssv1758611,nssv1758597,nssv1758607,nssv1757928,nssv1758613,nssv1758636,nssv1758633,nssv1758598,nssv1758637,nssv1758632,nssv1758618,nssv1758634,nssv1758569,nssv1758638,nssv1758616,nssv1758602,nssv1758593,nssv1758617 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv480459 1 28521478 28521478 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020056 M 9 0 0 "" esv27407 1 28525684 28527481 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20171 M 40 0 2 "" NA18861,NA19129 nsv7557 1 28536220 28568097 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4043,nssv1003,nssv2893,nssv6496 M 9 4 0 "" NA12156,NA12878,NA18555,NA19240 esv3400135 1 28552631 28552744 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740959 M 185 1 0 "" NA19240 nsv481407 1 28577152 28577152 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015573 M 9 0 0 PHACTR4 nsv7568 1 28580390 28611219 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2004 M 9 1 0 PHACTR4 NA18555 nsv479078 1 28581970 28581970 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015846 M 9 0 0 PHACTR4 nsv481368 1 28587139 28587139 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019879 M 9 0 0 PHACTR4 nsv481357 1 28588446 28588446 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013054 M 9 0 0 PHACTR4 nsv477974 1 28589385 28589385 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016415 M 9 1 0 PHACTR4 NA18517 nsv480514 1 28590613 28590613 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013789 M 9 0 0 PHACTR4 esv2763087 1 28594585 28607999 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7022632 M 1109 0 1 PHACTR4 SW_1209 nsv480119 1 28596365 28596365 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013910 M 9 0 0 PHACTR4 nsv478136 1 28597042 28597042 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018023 M 9 1 0 PHACTR4 NA18507 nsv479595 1 28597071 28597071 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012113 M 9 0 0 PHACTR4 nsv481172 1 28597237 28597237 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013348 M 9 0 0 PHACTR4 nsv475594 1 28597534 28597534 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015236 M 9 1 0 PHACTR4 NA12878 nsv480904 1 28599566 28599566 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017412 M 9 0 0 PHACTR4 nsv473950 1 28601676 28601676 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014940 M 9 1 0 PHACTR4 NA12156 nsv475285 1 28602205 28602205 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015844 M 9 1 0 PHACTR4 NA19240 nsv474600 1 28603002 28603002 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016109 M 9 1 0 PHACTR4 NA18956 nsv479574 1 28603439 28603439 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015149 M 9 0 0 PHACTR4 nsv480960 1 28605187 28605187 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016694 M 9 0 0 PHACTR4 nsv479237 1 28606115 28606115 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013141 M 9 0 0 PHACTR4 nsv480717 1 28611119 28611119 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016895 M 9 0 0 PHACTR4 nsv480258 1 28611374 28611374 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020021 M 9 0 0 PHACTR4 nsv481019 1 28615436 28615436 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019602 M 9 0 0 PHACTR4 nsv481264 1 28686966 28686966 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013900 M 9 0 0 PHACTR4 nsv478587 1 28687080 28687080 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019869 M 9 1 0 PHACTR4 NA18507 nsv475450 1 28689386 28689386 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015357 M 9 1 0 PHACTR4 NA19240 nsv480111 1 28692904 28692904 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019965 M 9 0 0 PHACTR4 nsv472443 1 28698334 28698334 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018397 M 9 1 0 PHACTR4 NA18555 nsv479444 1 28698557 28698557 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014002 M 9 0 0 PHACTR4 nsv480901 1 28698581 28698581 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016622 M 9 0 0 PHACTR4 nsv480236 1 28698850 28698850 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013744 M 9 0 0 PHACTR4 nsv475240 1 28700194 28700194 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016840 M 9 1 0 "" NA19240 nsv545919 1 28700476 28710162 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712052 M 17421 0 1 RCC1,SNHG3 nsv477406 1 28701135 28701135 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017414 M 9 1 0 "" NA18517 nsv481388 1 28704480 28704480 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011552 M 9 0 0 "" nsv481614 1 28704925 28704925 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012216 M 9 0 0 "" nsv947421 1 28705050 28716447 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761555 M 97 1 0 RCC1,SNHG3 HGDP00665 nsv479542 1 28705088 28705088 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013958 M 9 0 0 RCC1,SNHG3 nsv479597 1 28707954 28707954 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010995 M 9 0 0 RCC1,SNHG3 nsv480107 1 28708611 28708611 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011450 M 9 0 0 RCC1,SNHG3 nsv945856 1 28724966 28726237 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1758659,nssv1758680,nssv1758647,nssv1758704,nssv1758665,nssv1758696,nssv1758645,nssv1758734,nssv1758660,nssv1758693,nssv1758658,nssv1758730,nssv1758657,nssv1758713,nssv1758722,nssv1758710,nssv1758718,nssv1758682,nssv1758649,nssv1758666,nssv1758672,nssv1758731,nssv1758654,nssv1758714,nssv1758669,nssv1758702,nssv1758644,nssv1758717,nssv1758663,nssv1758675,nssv1758651,nssv1758676,nssv1758720,nssv1758690,nssv1758670,nssv1758671,nssv1758656,nssv1758715,nssv1758643,nssv1758678,nssv1758727,nssv1758728,nssv1758642,nssv1758737,nssv1758726,nssv1758674,nssv1758661,nssv1758707,nssv1758725,nssv1758692,nssv1758655,nssv1758712,nssv1758653,nssv1758733,nssv1758648,nssv1758700,nssv1758652,nssv1758701,nssv1758723,nssv1758711,nssv1758719,nssv1758673,nssv1758724,nssv1758729,nssv1758662,nssv1758667,nssv1758650,nssv1758641,nssv1758646,nssv1758681,nssv1758721,nssv1758664,nssv1758691,nssv1758695,nssv1758679,nssv1758684,nssv1758706,nssv1758677,nssv1758698,nssv1758686,nssv1758705,nssv1758689,nssv1758683,nssv1758703,nssv1758697,nssv1758668,nssv1758688,nssv1758716,nssv1758732,nssv1758709,nssv1758694,nssv1758735,nssv1758687,nssv1758708,nssv1758685,nssv1758736,nssv1758699 M 97 10 0 RCC1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv478111 1 28752563 28752563 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013593 M 9 1 0 TRNAU1AP NA18507 nsv506924 1 28807179 28813179 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619229 M 4 0 0 TAF12 NA10860 nsv819244 1 28810774 28820198 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418577 M 2 0 1 TAF12 AK1 nsv822209 1 28822555 28828270 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1439451 M 31 0 1 TAF12 NA18537 nsv476520 1 28824359 28824359 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011193 M 9 1 0 TAF12 NA12878 nsv475854 1 28827636 28827636 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016737 M 9 1 0 TAF12 NA12878 nsv545920 1 28847737 28877333 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712053 M 17421 0 1 GMEB1,RNU11 esv27154 1 28881153 28882469 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17553 M 40 0 1 GMEB1 NA12489 nsv477940 1 28918415 28918415 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016658 M 9 1 0 "" NA18517 nsv509080 1 28925638 28954514 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621089 M 4 1 0 YTHDF2 NA15510 nsv945857 1 28941727 28942949 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756761,nssv1756753,nssv1758757,nssv1756772,nssv1758742,nssv1756723,nssv1758756,nssv1756774,nssv1756758,nssv1758765,nssv1758755,nssv1756773,nssv1758750,nssv1756725,nssv1758752,nssv1756756,nssv1758754,nssv1756752,nssv1756766,nssv1756739,nssv1758746,nssv1756736,nssv1758748,nssv1756722,nssv1758760,nssv1756733,nssv1758766,nssv1756741,nssv1758751,nssv1756719,nssv1756765,nssv1756718,nssv1756764,nssv1756755,nssv1758762,nssv1756767,nssv1758741,nssv1756747,nssv1758753,nssv1756724,nssv1756762,nssv1756749,nssv1758739,nssv1756729,nssv1758745,nssv1756720,nssv1758749,nssv1758763,nssv1758740,nssv1756731,nssv1758747,nssv1756721,nssv1756763,nssv1756740,nssv1756757,nssv1756745,nssv1758769,nssv1756769,nssv1756759,nssv1758773,nssv1758758,nssv1756771,nssv1758767,nssv1756738,nssv1758744,nssv1756770,nssv1756760,nssv1756734,nssv1758759,nssv1758772,nssv1758743,nssv1758764,nssv1756735,nssv1758770,nssv1758761,nssv1758738,nssv1756744,nssv1756737,nssv1756727,nssv1756730,nssv1756750,nssv1758771,nssv1758768,nssv1756775,nssv1756751,nssv1756776,nssv1756726,nssv1756728,nssv1756716,nssv1756743,nssv1756742,nssv1756717,nssv1756746,nssv1756754,nssv1756748,nssv1756768,nssv1756732 M 97 10 0 YTHDF2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv160265 1 28950199 28952457 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178843 M 24 YTHDF2 nsv473498 1 28956953 28956953 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020238 M 9 1 0 YTHDF2 NA19129 dgv3n21 1 28980482 29017775 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv517547,nsv525553 M 2026 0 3 OPRD1 nsv460928 1 28980482 29038725 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537404 M 1557 0 1 OPRD1 1782681216_A nsv545921 1 28980482 29038725 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173805 M 17421 0 1 OPRD1 1782681216_A nsv519203 1 28980482 29047960 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696691 M 2026 1 0 OPRD1 nsv525310 1 29011562 29017775 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701417 M 2026 0 1 OPRD1 nsv511687 1 29176875 29179033 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626326 M 1 0 1 EPB41 1 esv25713 1 29177014 29178897 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18451 M 40 0 2 EPB41 NA18517,NA18858 nsv945858 1 29177275 29182294 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756794,nssv1756871,nssv1756792,nssv1756829,nssv1756855,nssv1756811,nssv1756799,nssv1756827,nssv1756783,nssv1756839,nssv1756790,nssv1756814,nssv1756863,nssv1756865,nssv1756789,nssv1756804,nssv1756795,nssv1756872,nssv1756778,nssv1756802,nssv1756859,nssv1756836,nssv1756780,nssv1756825,nssv1756861,nssv1756822,nssv1756787,nssv1756807,nssv1756785,nssv1756869,nssv1756805,nssv1756851,nssv1756798,nssv1756845,nssv1756781,nssv1756815,nssv1756862,nssv1756833,nssv1756788,nssv1756853,nssv1756808,nssv1756819,nssv1756796,nssv1756830,nssv1756856,nssv1756820,nssv1756858,nssv1756810,nssv1756784,nssv1756813,nssv1756793,nssv1756850,nssv1756791,nssv1756852,nssv1756857,nssv1756816,nssv1756786,nssv1756838,nssv1756782,nssv1756849,nssv1756854,nssv1756835,nssv1756779,nssv1756821,nssv1756860,nssv1756868,nssv1756801,nssv1756817,nssv1756806,nssv1756834,nssv1756797,nssv1756844,nssv1756826,nssv1756803,nssv1756864,nssv1756866,nssv1756870,nssv1756842,nssv1756809,nssv1756800,nssv1756873,nssv1756818,nssv1756837,nssv1756812,nssv1756831,nssv1756846,nssv1756832,nssv1756841,nssv1756843,nssv1756840,nssv1756777,nssv1756824,nssv1756828,nssv1756823,nssv1756848,nssv1756867,nssv1756847 M 97 10 0 EPB41 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7579 1 29220048 29264692 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4053 M 9 0 1 EPB41 NA12878 nsv1012565 1 29260224 29312016 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473342 M 29084 0 1 EPB41 nsv509091 1 29302319 29362998 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619783 M 4 1 0 EPB41,SRSF4,TMEM200B NA10860 nsv822220 1 29434584 29437978 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433414 M 31 1 0 PTPRU NA18526 nsv834546 1 29444869 29632888 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444407,nssv1444418 M 95 0 2 PTPRU nsv1002686 1 29493343 29571703 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465095 M 29084 1 0 PTPRU nsv545922 1 29493474 29551361 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712054 M 17421 0 1 PTPRU esv3360939 1 29597718 29597718 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653237,essv8653238,essv8653236 M 185 3 0 "" NA19238,NA19239,NA19240 nsv545923 1 29645627 29656342 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712055 M 17421 0 1 "" nsv481413 1 29704615 29704615 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018670 M 9 0 0 "" nsv474654 1 29707298 29707298 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011016 M 9 1 0 "" NA18956 nsv7590 1 29708903 29740480 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5449 M 9 1 0 "" NA19129 nsv478286 1 29710471 29710471 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015579 M 9 1 0 "" NA18507 nsv471948 1 29711094 29711094 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015235 M 9 1 0 "" NA18555 nsv473458 1 29713405 29713405 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015557 M 9 1 0 "" NA19129 esv1675706 1 29717841 29717841 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4292225 M 2 1 0 "" HuRef esv2513036 1 29717842 29717917 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5332447 M 1 0 1 "" NA18507 esv3306823 1 29734987 29734988 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7743833,essv7744847,essv7752664,essv7750536,essv7741603,essv7758940,essv7743073 M 185 7 0 "" NA18502,NA18505,NA18511,NA18916,NA19129,NA19190,NA19257 esv3390848 1 29734987 29735003 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898743,essv8898749,essv8898745,essv8898748,essv8898746,essv8898742,essv8898744 M 185 7 0 "" NA18502,NA18505,NA18511,NA18916,NA19129,NA19190,NA19257 esv3349279 1 29750550 30901333 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740960 M 185 1 0 "" NA19240 esv3434210 1 29800678 29800892 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740961 M 185 1 0 "" NA19240 nsv475123 1 29803108 29803108 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012228 M 9 1 0 "" NA19240 nsv472843 1 29812561 29812561 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015530 M 9 1 0 "" NA18555 dgv4n21 1 29906089 29907258 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv521489,nsv526370 M 2026 2 0 "" esv1005469 1 29907304 29912882 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565186 M 3 0 1 "" HuRef esv1779209 1 29923618 29923669 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3956446 M 2 0 1 "" HuRef nsv945860 1 29925756 29927904 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756891,nssv1756929,nssv1756955,nssv1756930,nssv1756884,nssv1756909,nssv1756896,nssv1756940,nssv1756882,nssv1756915,nssv1756885,nssv1756938,nssv1756957,nssv1756874,nssv1756951,nssv1756897,nssv1756960,nssv1756925,nssv1756875,nssv1756917,nssv1756892,nssv1756944,nssv1756876,nssv1756964,nssv1756880,nssv1756908,nssv1756886,nssv1756943,nssv1756889,nssv1756968,nssv1756958,nssv1756921,nssv1756903,nssv1756937,nssv1756883,nssv1756924,nssv1756890,nssv1756933,nssv1756956,nssv1756970,nssv1756898,nssv1756936,nssv1756887,nssv1756945,nssv1756895,nssv1756967,nssv1756878,nssv1756946,nssv1756952,nssv1756899,nssv1756902,nssv1756966,nssv1756893,nssv1756904,nssv1756959,nssv1756920,nssv1756905,nssv1756911,nssv1756953,nssv1756962,nssv1756881,nssv1756901,nssv1756894,nssv1756922,nssv1756954,nssv1756919,nssv1756879,nssv1756969,nssv1756877,nssv1756948,nssv1756888,nssv1756913,nssv1756926,nssv1756918,nssv1756916,nssv1756907,nssv1756942,nssv1756927,nssv1756949,nssv1756910,nssv1756912,nssv1756950,nssv1756947,nssv1756932,nssv1756941,nssv1756906,nssv1756965,nssv1756939,nssv1756900,nssv1756961,nssv1756914,nssv1756935,nssv1756963,nssv1756931,nssv1756934,nssv1756923,nssv1756928 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7601 1 29930656 29957535 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2014 M 9 1 0 "" NA18555 nsv509102 1 29945493 30010314 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619784 M 4 1 0 "" NA10860 nsv945861 1 30003918 30004525 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756995,nssv1758883,nssv1756988,nssv1757010,nssv1756975,nssv1757003,nssv1758902,nssv1758884,nssv1756982,nssv1758886,nssv1758900,nssv1758911,nssv1756993,nssv1758907,nssv1757002,nssv1757012,nssv1756991,nssv1758872,nssv1758899,nssv1758881,nssv1756981,nssv1757013,nssv1756974,nssv1758877,nssv1756972,nssv1758914,nssv1756986,nssv1758913,nssv1756989,nssv1757018,nssv1758896,nssv1757023,nssv1758897,nssv1757021,nssv1756977,nssv1757006,nssv1756983,nssv1758910,nssv1758903,nssv1756971,nssv1756980,nssv1757015,nssv1757000,nssv1758887,nssv1756984,nssv1758880,nssv1758898,nssv1758882,nssv1756999,nssv1757011,nssv1756990,nssv1758908,nssv1756987,nssv1758912,nssv1756978,nssv1758873,nssv1758901,nssv1756994,nssv1758904,nssv1756996,nssv1756976,nssv1758894,nssv1756973,nssv1757005,nssv1756979,nssv1758909,nssv1756985,nssv1758885,nssv1756992,nssv1757001,nssv1758905,nssv1758878,nssv1757014,nssv1758891,nssv1758875,nssv1756998,nssv1757017,nssv1757008,nssv1758892,nssv1758888,nssv1758890,nssv1757020,nssv1757009,nssv1757022,nssv1758893,nssv1758889,nssv1758915,nssv1756997,nssv1757016,nssv1757019,nssv1758879,nssv1757004,nssv1758874,nssv1757007,nssv1758906,nssv1758876,nssv1758895 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv512729 1 30015730 30015759 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625355 M 1 1 0 "" 1 esv1170546 1 30016746 30016746 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4038385 M 2 1 0 "" HuRef esv1184465 1 30016800 30016800 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4058687 M 2 1 0 "" HuRef nsv545924 1 30018000 30528119 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712056 M 17421 1 0 "" dgv73e59 1 30070252 30072050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3413761,esv3333765 M 185 2 0 "" NA19239,NA19240 nsv479137 1 30081431 30081431 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012333 M 9 0 0 "" esv8236 1 30117823 30118894 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30677 M 1 0 0 "" esv3893303 1 30120165 30142197 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787592 M 3017 0 1 "" esv3379609 1 30135670 30135670 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740962 M 185 1 0 "" NA19240 nsv460951 1 30141470 30175555 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537426 M 1557 0 1 "" HGDP00976 nsv545925 1 30141470 30175555 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173806 M 17421 0 1 "" HGDP00976 nsv7612 1 30153177 30198112 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8893 M 9 0 1 "" NA12156 nsv1011788 1 30157198 30214684 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700635 M 29084 0 1 "" esv1002943 1 30192852 30204151 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563870 M 3 0 1 "" HuRef nsv7623 1 30199030 30231539 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6516 M 9 1 0 "" NA12156 esv3893414 1 30222569 30282026 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789153 M 3017 1 0 "" esv2763858 1 30258097 30261148 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7022854,essv7022743,essv7022966 M 1109 0 3 "" SW_0031,SW_0593,SW_1137 nsv515814 1 30258715 30260927 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv667788,nssv664863,nssv658372,nssv657229,nssv668377,nssv683554 M 2026 0 6 "" esv25779 1 30304515 30305330 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10698 M 40 1 0 "" NA19099 nsv7634 1 30304693 30325671 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8909 M 9 0 1 "" NA12156 dgv221n54 1 30327271 30951250 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545927,nsv545930,nsv545926,nsv545928 M 17421 0 4 "" dgv143n100 1 30336038 30952176 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005851,nsv1001237 M 29084 0 4 "" nsv545929 1 30346745 30479117 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712060 M 17421 0 1 "" nsv834558 1 30361070 30540999 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444429 M 95 1 0 "" esv2072629 1 30436704 30437184 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4969544 M 1 0 1 "" NA18507 esv29671 1 30461256 30466400 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20952,esv15135 M 40 0 2 "" NA11894,NA18517 esv3413479 1 30461452 30462550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692288 M 185 1 0 "" NA19238 dgv74e59 1 30461752 30462650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3411776,esv3426579 M 185 2 0 "" NA19239,NA19240 esv2758929 1 30478922 30514243 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756840 M 270 0 6 "" NA07048,NA07055,NA10835,NA10863,NA12249,NA12740 dgv144n100 1 30493566 30517797 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007398,nsv1001571 M 29084 0 2 "" nsv476754 1 30501027 30501027 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013200 M 9 1 0 "" NA12878 nsv1004875 1 30503995 30523266 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471473 M 29084 1 0 "" esv2763836 1 30506623 30512383 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7023077,essv7023188,essv7023299,essv7023521,essv7023410 M 1109 0 5 "" SW_0085,SW_0090,SW_0627,SW_0757,SW_1253 esv26727 1 30510995 30512660 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17301 M 40 0 3 "" NA12414,NA12489,NA15510 nsv9879 1 30511057 30513066 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv13746,nssv14079 M 31 0 2 "" NA10863,NA12740 nsv545931 1 30511272 30511382 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712062 M 17421 0 1 "" nsv545932 1 30511272 30511943 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712063 M 17421 0 1 "" dgv222n54 1 30511272 30512595 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545943,nsv545933,nsv545938,nsv545941,nsv545937,nsv545939,nsv545935,nsv545940,nsv545934 M 17421 0 68 "" dgv223n54 1 30511272 30513080 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545936,nsv545942,nsv545944 M 17421 0 7 "" nsv7646 1 30544833 30578979 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1013 M 9 1 0 "" NA19240 esv27233 1 30546544 30547144 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11685 M 40 1 0 "" NA18861 nsv476229 1 30550223 30550223 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020415 M 9 1 0 "" NA12878 nsv834569 1 30550650 30704943 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444440 M 95 1 0 "" nsv945862 1 30603995 30606051 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1758934,nssv1758986,nssv1758933,nssv1758953,nssv1758935,nssv1759010,nssv1758920,nssv1758962,nssv1758922,nssv1758983,nssv1758997,nssv1758974,nssv1758932,nssv1758956,nssv1758945,nssv1758954,nssv1758947,nssv1758973,nssv1758928,nssv1758952,nssv1759002,nssv1758966,nssv1758918,nssv1758955,nssv1758938,nssv1759009,nssv1758936,nssv1758980,nssv1758944,nssv1758969,nssv1758923,nssv1758958,nssv1758999,nssv1758990,nssv1758924,nssv1758943,nssv1758931,nssv1759011,nssv1758926,nssv1758968,nssv1758917,nssv1758964,nssv1758919,nssv1758963,nssv1759000,nssv1759004,nssv1758927,nssv1758981,nssv1759001,nssv1758961,nssv1758930,nssv1758978,nssv1758993,nssv1758967,nssv1758994,nssv1758950,nssv1758929,nssv1758987,nssv1758995,nssv1758960,nssv1758998,nssv1758984,nssv1758996,nssv1758977,nssv1758937,nssv1758979,nssv1758940,nssv1759003,nssv1758925,nssv1758970,nssv1758921,nssv1758982,nssv1758976,nssv1759005,nssv1759008,nssv1759006,nssv1758992,nssv1758991,nssv1758948,nssv1758959,nssv1758957,nssv1758975,nssv1759007,nssv1758989,nssv1758951,nssv1758942,nssv1759012,nssv1758985,nssv1758949,nssv1758939,nssv1758972,nssv1758946,nssv1758971,nssv1758941,nssv1758916,nssv1758988,nssv1758965 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv471972 1 30612295 30612295 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020142 M 9 1 0 "" NA18555 nsv509113 1 30636578 30654856 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619785,nssv617991,nssv623779,nssv621090 M 4 4 0 "" CHM,NA10860,NA15510,NA18994 nsv7657 1 30644163 30655616 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4077,nssv1022 M 9 2 0 "" NA12878,NA19240 nsv499355 1 30651101 30651402 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv586152 M 9 1 0 "" esv2214908 1 30654964 30655384 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4593443 M 1 0 1 "" NA18507 nsv545945 1 30657797 30711177 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712139 M 17421 0 1 "" nsv7668 1 30660933 30706220 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8924 M 9 0 1 "" NA12156 nsv834580 1 30665224 30827346 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444451 M 95 0 1 "" nsv1004876 1 30674949 30723801 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471474 M 29084 0 1 "" nsv1003513 1 30689751 30735061 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466302 M 29084 1 0 "" nsv476541 1 30732616 30732616 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016596 M 9 1 0 "" NA12878 nsv1004002 1 30748515 30807489 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467914 M 29084 0 1 "" nsv520401 1 30753373 30758238 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697394 M 2026 0 1 "" esv8551 1 30806384 30806693 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30992 M 1 0 0 "" esv6950 1 30812981 30814475 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29391 M 1 0 0 "" nsv1009641 1 30843052 30854028 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467824 M 29084 0 1 "" nsv545946 1 30861554 30924039 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712140 M 17421 0 1 "" esv3368615 1 30879352 30880550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692292 M 185 1 0 "" NA19239 esv3432910 1 30879352 30883150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692293 M 185 1 0 "" NA19240 nsv7679 1 30880511 30914143 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10785,nssv1031 M 9 2 0 "" NA18956,NA19240 nsv460995 1 30886310 31044638 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537451 M 1557 1 0 LAPTM5,MATN1,MATN1-AS1,MIR4420 HGDP01203 nsv545947 1 30886310 31044638 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173807 M 17421 1 0 LAPTM5,MATN1,MATN1-AS1,MIR4420 HGDP01203 esv6869 1 30895173 30897439 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29310 M 1 0 0 "" esv3332144 1 30896852 30897450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692294 M 185 1 0 "" NA19240 esv24111 1 30896875 30897370 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11013 M 40 1 0 "" NA12287 esv1182314 1 30897176 30897176 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4283188 M 2 1 0 "" HuRef esv3344309 1 30900442 30901227 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652081 M 185 1 0 "" NA19240 nsv512730 1 30900874 30901206 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625356 M 1 1 0 "" 1 dgv145n100 1 30911505 31038432 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010777,nsv997356 M 29084 2 0 LAPTM5,MATN1,MATN1-AS1,MIR4420 nsv947422 1 30916263 30941328 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2756747 M 97 1 0 "" HGDP00998 nsv476898 1 30937598 30937598 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020294 M 9 1 0 "" NA12878 nsv473861 1 30941694 30941694 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019924 M 9 1 0 "" NA12156 esv26125 1 30942241 30944401 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10436 M 40 0 3 "" NA18907,NA19099,NA19240 nsv509124 1 30956044 31005140 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619786 M 4 1 0 LAPTM5,MATN1,MATN1-AS1,MIR4420 NA10860 esv1007398 1 30975685 30977627 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565079 M 3 1 0 "" HuRef esv3375939 1 30977492 30977918 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652082 M 185 1 0 LAPTM5 NA19240 nsv512731 1 30977722 30977961 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625357 M 1 1 0 LAPTM5 1 nsv7690 1 31004937 31035943 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5460 M 9 1 0 "" NA19129 esv1920491 1 31017065 31017455 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4835916 M 1 0 1 "" NA18507 nsv160695 1 31017158 31017249 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179273 M 24 "" esv1626816 1 31017248 31017342 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3654771 M 2 0 1 "" HuRef nsv159749 1 31017249 31017342 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178327 M 24 "" nsv159205 1 31018594 31018594 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177783 M 24 "" esv4431 1 31021624 31022114 CNV loss Wang_et_al_2008 18987735 Sequencing essv26872 M 1 0 1 "" YH esv1377768 1 31021740 31021811 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4095672 M 2 0 1 "" HuRef nsv474060 1 31058903 31058903 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014320 M 9 1 0 "" NA12156 nsv519204 1 31110004 31174735 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696692 M 2026 1 0 SDC3 nsv461006 1 31119907 31148156 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537462 M 1557 0 1 SDC3 HGDP01077 nsv545948 1 31119907 31148156 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173808 M 17421 0 1 SDC3 HGDP01077 nsv545949 1 31126664 31180643 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712141 M 17421 0 1 PUM1,SDC3 nsv470707 1 31134811 31190045 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547720 M 443 1 0 PUM1,SDC3,SNORD103A,SNORD103B HGDP01049 esv2244846 1 31139876 31140318 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4651898 M 1 0 1 SDC3 NA18507 nsv160596 1 31139968 31140032 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179174 M 24 SDC3 nsv160199 1 31140093 31140159 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178777 M 24 SDC3 esv3386830 1 31142398 31142409 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863687 M 185 1 0 SDC3 NA12005 nsv947423 1 31179638 31187001 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2766057 M 97 1 0 PUM1,SNORD103A,SNORD103B HGDP00998 nsv545950 1 31180643 31307750 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712142 M 17421 0 1 PUM1,SNORD103A,SNORD103B,SNORD85 nsv945863 1 31180801 31181884 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757342,nssv1759050,nssv1759033,nssv1759036,nssv1759031,nssv1757338,nssv1759032,nssv1759062,nssv1759030,nssv1757354,nssv1757349,nssv1759076,nssv1759037,nssv1759043,nssv1759019,nssv1757334,nssv1759042,nssv1759045,nssv1759029,nssv1759039,nssv1759025,nssv1759064,nssv1759017,nssv1759048,nssv1759020,nssv1759047,nssv1759044,nssv1759038,nssv1759035,nssv1759080,nssv1759041,nssv1759073,nssv1757348,nssv1757335,nssv1759015,nssv1759052,nssv1759028,nssv1759078,nssv1757347,nssv1759070,nssv1759014,nssv1759063,nssv1757346,nssv1759056,nssv1759024,nssv1757333,nssv1757350,nssv1759069,nssv1759016,nssv1759053,nssv1759022,nssv1759065,nssv1759023,nssv1759071,nssv1757341,nssv1759013,nssv1759026,nssv1757352,nssv1759027,nssv1757360,nssv1759021,nssv1759051,nssv1757343,nssv1759049,nssv1757344,nssv1759068,nssv1757345,nssv1759058,nssv1759034,nssv1759054,nssv1759018,nssv1759040,nssv1757351,nssv1759061,nssv1759046,nssv1757356,nssv1757359,nssv1759066,nssv1757355,nssv1759074,nssv1759055,nssv1759060,nssv1757340,nssv1757339,nssv1759077,nssv1757353,nssv1757336,nssv1759075,nssv1759079,nssv1759057,nssv1757357,nssv1757332,nssv1759059,nssv1757337,nssv1757358,nssv1759072,nssv1759067 M 97 10 0 PUM1,SNORD103A,SNORD103B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945864 1 31194612 31195408 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757378,nssv1757401,nssv1757442,nssv1757454,nssv1757377,nssv1757391,nssv1757364,nssv1757421,nssv1757376,nssv1757434,nssv1757392,nssv1757415,nssv1757373,nssv1757416,nssv1757439,nssv1757384,nssv1757380,nssv1757451,nssv1757383,nssv1757429,nssv1757390,nssv1757395,nssv1757370,nssv1757396,nssv1757363,nssv1757455,nssv1757362,nssv1757435,nssv1757375,nssv1757419,nssv1757379,nssv1757433,nssv1757438,nssv1757418,nssv1757445,nssv1757361,nssv1757367,nssv1757431,nssv1757372,nssv1757388,nssv1757443,nssv1757422,nssv1757444,nssv1757425,nssv1757447,nssv1757386,nssv1757382,nssv1757432,nssv1757371,nssv1757402,nssv1757385,nssv1757423,nssv1757365,nssv1757428,nssv1757440,nssv1757407,nssv1757446,nssv1757408,nssv1757441,nssv1757412,nssv1757381,nssv1757411,nssv1757368,nssv1757393,nssv1757374,nssv1757450,nssv1757369,nssv1757409,nssv1757366,nssv1757398,nssv1757389,nssv1757406,nssv1757387,nssv1757430,nssv1757414,nssv1757448,nssv1757457,nssv1757399,nssv1757424,nssv1757426,nssv1757417,nssv1757452,nssv1757449,nssv1757397,nssv1757410,nssv1757427,nssv1757453,nssv1757405,nssv1757403,nssv1757404,nssv1757436,nssv1757437,nssv1757420,nssv1757413,nssv1757456,nssv1757400,nssv1757394 M 97 10 0 PUM1,SNORD103A,SNORD103B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7701 1 31211445 31241511 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10787 M 9 1 0 PUM1,SNORD85 NA18956 nsv506925 1 31244010 31250010 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619230,nssv617528,nssv623266 M 4 0 0 PUM1 CHM,NA10860,NA18994 nsv508711 1 31330841 31437982 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618969 M 4 0 1 NKAIN1 NA10860 esv3334030 1 31332654 31332654 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740963 M 185 1 0 "" NA19240 esv21850 1 31347232 31348424 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11728 M 40 0 1 "" NA12878 nsv945865 1 31348350 31358329 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757473,nssv1757488,nssv1757541,nssv1757500,nssv1757475,nssv1757550,nssv1757539,nssv1757510,nssv1757474,nssv1757497,nssv1757482,nssv1757490,nssv1757487,nssv1757534,nssv1757468,nssv1757521,nssv1757480,nssv1757546,nssv1757469,nssv1757526,nssv1757461,nssv1757549,nssv1757476,nssv1757501,nssv1757536,nssv1757523,nssv1757459,nssv1757545,nssv1757470,nssv1757547,nssv1757489,nssv1757491,nssv1757472,nssv1757484,nssv1757542,nssv1757512,nssv1757535,nssv1757516,nssv1757540,nssv1757554,nssv1757478,nssv1757513,nssv1757479,nssv1757531,nssv1757477,nssv1757553,nssv1757464,nssv1757515,nssv1757465,nssv1757533,nssv1757462,nssv1757532,nssv1757467,nssv1757498,nssv1757543,nssv1757518,nssv1757460,nssv1757528,nssv1757466,nssv1757505,nssv1757544,nssv1757517,nssv1757538,nssv1757525,nssv1757486,nssv1757508,nssv1757537,nssv1757548,nssv1757463,nssv1757483,nssv1757471,nssv1757481,nssv1757502,nssv1757509,nssv1757493,nssv1757485,nssv1757492,nssv1757504,nssv1757511,nssv1757522,nssv1757458,nssv1757551,nssv1757499,nssv1757494,nssv1757552,nssv1757503,nssv1757520,nssv1757496,nssv1757519,nssv1757506,nssv1757495,nssv1757527,nssv1757529,nssv1757524,nssv1757514,nssv1757530,nssv1757507 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv274929 1 31394002 31397976 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585894 M 1250 0 1 "" nsv160707 1 31449037 31450756 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179285 M 24 NKAIN1 esv2758930 1 31454967 32238918 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757728,esv2756841 M 270 0 1 BAI2,COL16A1,FABP3,HCRTR1,LOC149086,LOC284551,MIR4254,NKAIN1,PEF1,PTP4A2,SERINC2,SNRNP40,SPOCD1,TINAGL1,ZCCHC17 NA12865 esv21860 1 31469492 31470357 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18661 M 40 0 8 NKAIN1 NA18505,NA18523,NA18861,NA18907,NA18909,NA19129,NA19190,NA19257 nsv9990 1 31492563 31496044 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv15765 M 31 0 1 "" NA18537 nsv822231 1 31492567 31494342 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1438184,nssv1439453 M 31 0 2 "" NA18537,NA18592 esv1672561 1 31497487 31497487 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3730001 M 2 1 0 "" HuRef nsv161067 1 31504561 31513729 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179645 M 24 SNRNP40 nsv10051 1 31506872 31509756 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16093 M 31 1 0 SNRNP40 NA18504 nsv471842 1 31530570 31530570 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019416 M 9 1 0 SNRNP40 NA18555 esv1665695 1 31590996 31590996 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3776205 M 2 1 0 ZCCHC17 HuRef esv1003353 1 31615089 31622196 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564863 M 3 0 1 FABP3 HuRef nsv520589 1 31628061 31630585 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697507 M 2026 0 1 "" esv1538435 1 31632360 31632734 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3880925 M 2 0 1 "" HuRef nsv7712 1 31659995 31688285 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5468,nssv4085,nssv1039,nssv6532 M 9 4 0 SERINC2 NA12156,NA12878,NA19129,NA19240 nsv509135 1 31666005 31717658 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619787,nssv621091 M 4 2 0 SERINC2 NA10860,NA15510 esv1004118 1 31676044 31677315 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564081 M 3 1 0 SERINC2 HuRef esv21814 1 31677152 31677661 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12924 M 40 2 0 SERINC2 NA12156,NA12287 esv1133300 1 31677421 31677421 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3979486 M 2 1 0 SERINC2 HuRef esv1676191 1 31677571 31677571 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3990095 M 2 1 0 SERINC2 HuRef nsv480863 1 31709122 31709122 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019896 M 9 0 0 "" nsv945867 1 31731579 31733770 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757617,nssv1757952,nssv1757626,nssv1757574,nssv1757629,nssv1757639,nssv1757962,nssv1757575,nssv1757628,nssv1757951,nssv1757614,nssv1757578,nssv1757957,nssv1757580,nssv1757583,nssv1757587,nssv1757585,nssv1757567,nssv1757596,nssv1757560,nssv1757954,nssv1757582,nssv1757953,nssv1757559,nssv1757634,nssv1757573,nssv1757621,nssv1757561,nssv1757955,nssv1757570,nssv1757590,nssv1757589,nssv1757600,nssv1757576,nssv1757594,nssv1757579,nssv1757602,nssv1757568,nssv1757599,nssv1757572,nssv1757610,nssv1757948,nssv1757613,nssv1757577,nssv1757623,nssv1757566,nssv1757584,nssv1757949,nssv1757597,nssv1757638,nssv1757633,nssv1757569,nssv1757959,nssv1757635,nssv1757624,nssv1757562,nssv1757609,nssv1757563,nssv1757618,nssv1757637,nssv1757956,nssv1757571,nssv1757604,nssv1757565,nssv1757607,nssv1757950,nssv1757601,nssv1757564,nssv1757625,nssv1757636,nssv1757958,nssv1757586,nssv1757616,nssv1757612,nssv1757631,nssv1757591,nssv1757615,nssv1757627,nssv1757598,nssv1757603,nssv1757632,nssv1757630,nssv1757588,nssv1757960,nssv1757581,nssv1757608,nssv1757592,nssv1757595,nssv1757622,nssv1757605,nssv1757611,nssv1757619,nssv1757606,nssv1757558,nssv1757961,nssv1757593,nssv1757620 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509147 1 31733210 31765262 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619788,nssv617992,nssv623780,nssv621092 M 4 4 0 LOC149086,LOC284551 CHM,NA10860,NA15510,NA18994 nsv7723 1 31734799 31765936 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10798,nssv4095,nssv1048,nssv6542,nssv2021,nssv5475 M 9 6 0 LOC149086,LOC284551 NA12156,NA12878,NA18555,NA18956,NA19129,NA19240 esv1008042 1 31738859 31761805 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565286 M 3 1 0 LOC149086,LOC284551 HuRef esv1047143 1 31740406 31740406 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3825409 M 2 1 0 "" HuRef esv2559743 1 31744072 31766217 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5234776 M 1 0 0 LOC149086,LOC284551 NA18507 esv1513298 1 31744131 31744131 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3602292 M 2 1 0 "" HuRef nsv7734 1 31773326 31802980 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6550 M 9 1 0 "" NA12156 esv4808 1 31784311 31784825 CNV loss Wang_et_al_2008 18987735 Sequencing essv27249 M 1 0 1 "" YH nsv1011229 1 31804259 31844993 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472082 M 29084 0 1 TINAGL1 nsv10062 1 31809488 31861569 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv15780,nssv14086 M 31 1 1 HCRTR1,TINAGL1 NA18552,NA19221 esv1695245 1 31817131 31817196 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3937819 M 2 0 1 TINAGL1 HuRef nsv1000976 1 31850954 31938243 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464924 M 29084 0 1 COL16A1,HCRTR1,PEF1 esv3348184 1 31853652 31855150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692295 M 185 1 0 "" NA19239 nsv470708 1 31865112 31919351 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547721 M 443 0 1 COL16A1,HCRTR1,PEF1 HGDP00546 nsv545951 1 31865112 31938082 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712143 M 17421 1 0 COL16A1,HCRTR1,PEF1 nsv545952 1 31887380 31927871 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173809 M 17421 1 0 COL16A1 1780862339_A nsv472148 1 31903451 31903451 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019968 M 9 1 0 COL16A1 NA18555 nsv818123 1 31906324 31919351 CNV loss Wang_et_al_2007 17921354 SNP array nssv1415933 M 112 0 1 COL16A1 NA12750 nsv528364 1 31919351 31929596 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704951 M 2026 0 1 COL16A1 nsv461028 1 31938082 31987765 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537481 M 1557 0 1 BAI2,COL16A1 HGDP00433 nsv545953 1 31938082 31987765 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173810 M 17421 0 1 BAI2,COL16A1 HGDP00433 esv3382488 1 31946552 31947750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692296 M 185 1 0 "" NA19239 nsv1007786 1 31963748 32069112 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476019 M 29084 1 0 BAI2,MIR4254,SPOCD1 nsv1007390 1 31995940 32065220 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700637 M 29084 1 0 BAI2,MIR4254,SPOCD1 nsv476501 1 32011703 32011703 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019586 M 9 1 0 "" NA12878 esv2517616 1 32045190 32046215 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5181268 M 1 1 0 SPOCD1 NA18507 nsv822242 1 32053586 32054159 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431802 M 31 0 1 SPOCD1 AK20 nsv160616 1 32053964 32053964 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179194 M 24 SPOCD1 esv3303073 1 32053978 32054061 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7733062,essv7733900,essv7739073,essv7731730 M 185 4 0 SPOCD1 NA18501,NA18943,NA19099,NA19138 nsv545954 1 32074105 32115955 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712144 M 17421 1 0 "" nsv1009817 1 32113846 32265963 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468771 M 29084 1 0 KHDRBS1,PTP4A2 esv33582 1 32135537 32184713 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98660 M 51 0 1 PTP4A2 21606 nsv834591 1 32144041 32298052 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444462 M 95 0 1 KHDRBS1,PTP4A2 esv2127776 1 32146113 32146564 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4820483 M 1 0 1 PTP4A2 NA18507 nsv947424 1 32150394 32153423 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764363 M 97 1 0 PTP4A2 HGDP00998 nsv945868 1 32157144 32157741 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1757974,nssv1758023,nssv1757982,nssv1757998,nssv1758046,nssv1758057,nssv1757980,nssv1758024,nssv1757979,nssv1758059,nssv1757991,nssv1758021,nssv1758040,nssv1758056,nssv1757972,nssv1758001,nssv1757977,nssv1757990,nssv1758042,nssv1758003,nssv1758045,nssv1758017,nssv1757973,nssv1758039,nssv1757985,nssv1758037,nssv1757966,nssv1758000,nssv1757976,nssv1758035,nssv1757987,nssv1757997,nssv1757971,nssv1758054,nssv1757964,nssv1758030,nssv1758047,nssv1758058,nssv1757970,nssv1758050,nssv1757992,nssv1757988,nssv1757981,nssv1758007,nssv1757994,nssv1758013,nssv1758041,nssv1758028,nssv1758044,nssv1758055,nssv1757984,nssv1758002,nssv1758049,nssv1758052,nssv1757969,nssv1757999,nssv1758043,nssv1758038,nssv1757983,nssv1758051,nssv1757968,nssv1758004,nssv1757978,nssv1758026,nssv1757965,nssv1758029,nssv1757975,nssv1758018,nssv1757967,nssv1757989,nssv1758048,nssv1757995,nssv1758053,nssv1757993,nssv1758022,nssv1758031,nssv1758020,nssv1758010,nssv1758032,nssv1758036,nssv1758011,nssv1758009,nssv1758005,nssv1758006,nssv1758012,nssv1758015,nssv1758027,nssv1758008,nssv1758016,nssv1758034,nssv1758033,nssv1757986,nssv1758014,nssv1758025,nssv1757963,nssv1758019,nssv1757996 M 97 10 0 PTP4A2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv473209 1 32183692 32183692 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016046 M 9 1 0 "" NA19129 esv3431042 1 32183863 32183882 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593879 M 185 1 0 "" NA12873 esv3352317 1 32186006 32186006 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740965 M 185 1 0 "" NA19240 nsv10073 1 32220872 32225009 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16758 M 31 0 1 "" NA18564 nsv820067 1 32221830 32224443 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419454 M 2 0 1 "" AK1 nsv822254 1 32222562 32224153 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428021,nssv1440121 M 31 0 2 "" AK10,NA18564 esv25480 1 32317183 32320556 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16902 M 40 0 1 TMEM39B NA11993 dgv224n54 1 32317313 32319643 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545958,nsv545955 M 17421 0 2 TMEM39B dgv225n54 1 32317313 32320443 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545956,nsv545959 M 17421 0 2 TMEM39B nsv545957 1 32317313 32327172 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712147 M 17421 0 1 TMEM39B nsv476003 1 32417467 32417467 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020015 M 9 1 0 "" NA12878 nsv7745 1 32422058 32430257 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10803 M 9 1 0 TXLNA NA18956 nsv300 1 32445100 32479877 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1059 M 9 1 0 DCDC2B,EIF3I,IQCC,MTMR9LP,TMEM234 NA19240 nsv476322 1 32560802 32560802 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018358 M 9 1 0 HDAC1 NA12878 esv7048 1 32605766 32605965 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29489 M 1 0 0 BSDC1 nsv945869 1 32639137 32640939 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1758066,nssv1758127,nssv1758084,nssv1758083,nssv1758079,nssv1758122,nssv1758077,nssv1758130,nssv1758071,nssv1758111,nssv1758076,nssv1758113,nssv1758088,nssv1758105,nssv1758073,nssv1758131,nssv1758139,nssv1758060,nssv1758074,nssv1758112,nssv1758064,nssv1758116,nssv1758075,nssv1758121,nssv1758082,nssv1758118,nssv1758137,nssv1758154,nssv1758070,nssv1758155,nssv1758143,nssv1758095,nssv1758146,nssv1758114,nssv1758089,nssv1758109,nssv1758072,nssv1758156,nssv1758069,nssv1758098,nssv1758063,nssv1758087,nssv1758061,nssv1758094,nssv1758145,nssv1758136,nssv1758144,nssv1758151,nssv1758080,nssv1758126,nssv1758067,nssv1758097,nssv1758138,nssv1758104,nssv1758078,nssv1758110,nssv1758068,nssv1758115,nssv1758142,nssv1758152,nssv1758081,nssv1758148,nssv1758062,nssv1758119,nssv1758091,nssv1758123,nssv1758065,nssv1758120,nssv1758140,nssv1758099,nssv1758141,nssv1758147,nssv1758101,nssv1758085,nssv1758117,nssv1758132,nssv1758149,nssv1758096,nssv1758128,nssv1758134,nssv1758092,nssv1758090,nssv1758124,nssv1758133,nssv1758093,nssv1758125,nssv1758129,nssv1758108,nssv1758100,nssv1758107,nssv1758086,nssv1758103,nssv1758150,nssv1758106,nssv1758102,nssv1758135,nssv1758153 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv521689 1 32639304 32647867 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698309 M 2026 0 1 "" nsv517673 1 32647543 32647867 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv654219,nssv665622,nssv658183,nssv693089,nssv671459,nssv652612,nssv660765,nssv656688,nssv654560,nssv683040,nssv658815,nssv664022 M 2026 0 12 "" nsv945871 1 32650180 32668684 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1758335,nssv1758290,nssv1758319,nssv1758285,nssv1758367,nssv1758286,nssv1758326,nssv1758288,nssv1758320,nssv1758352,nssv1758297,nssv1758287,nssv1758305,nssv1758291,nssv1758301,nssv1758277,nssv1758364,nssv1758299,nssv1758308,nssv1758302,nssv1758345,nssv1758295,nssv1758366,nssv1758293,nssv1758331,nssv1758350,nssv1758360,nssv1758300,nssv1758306,nssv1758272,nssv1758304,nssv1758348,nssv1758340,nssv1758355,nssv1758344,nssv1758357,nssv1758157,nssv1758281,nssv1758310,nssv1758279,nssv1758296,nssv1758353,nssv1758339,nssv1758278,nssv1758327,nssv1758274,nssv1758322,nssv1758280,nssv1758321,nssv1758289,nssv1758309,nssv1758354,nssv1758328,nssv1758282,nssv1758312,nssv1758292,nssv1758313,nssv1758356,nssv1758338,nssv1758283,nssv1758342,nssv1758273,nssv1758343,nssv1758275,nssv1758365,nssv1758284,nssv1758329,nssv1758349,nssv1758362,nssv1758276,nssv1758332,nssv1758351,nssv1758307,nssv1758341,nssv1758358,nssv1758311,nssv1758359,nssv1758303,nssv1758361,nssv1758314,nssv1758334,nssv1758318,nssv1758333,nssv1758316,nssv1758315,nssv1758317,nssv1758336,nssv1758363,nssv1758346,nssv1758323,nssv1758324,nssv1758337,nssv1758294,nssv1758347,nssv1758298,nssv1758325,nssv1758330 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1005213 1 32737706 32888462 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472615 M 29084 1 0 ZBTB8A,ZBTB8OS nsv545960 1 32751825 32859639 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712150 M 17421 0 1 ZBTB8A nsv475689 1 32796136 32796136 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011022 M 9 1 0 ZBTB8A NA12878 nsv461039 1 32804999 32923538 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537491 M 1557 0 1 RBBP4,SYNC,ZBTB8A,ZBTB8OS HGDP00017 nsv545961 1 32804999 32923538 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173811 M 17421 0 1 RBBP4,SYNC,ZBTB8A,ZBTB8OS HGDP00017 esv2576617 1 32819170 32819844 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5236514 M 1 1 0 ZBTB8A NA18507 nsv512732 1 32819193 32820196 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625358 M 1 1 0 ZBTB8A 1 esv1277305 1 32819375 32819375 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3891525 M 2 1 0 ZBTB8A HuRef esv3893501 1 32835141 32860024 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25783915 M 3017 0 1 ZBTB8A,ZBTB8OS nsv519188 1 32857831 33019027 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696672 M 2026 0 1 KIAA1522,RBBP4,SYNC,YARS,ZBTB8OS nsv512733 1 32880712 32880740 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625359 M 1 1 0 ZBTB8OS 1 nsv160489 1 32891848 32896738 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179067 M 24 RBBP4 nsv945872 1 32904445 32907684 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1758376,nssv1758421,nssv1758387,nssv1758412,nssv1758384,nssv1758413,nssv1758370,nssv1758427,nssv1758383,nssv1758395,nssv1758375,nssv1758444,nssv1758396,nssv1758408,nssv1758377,nssv1758436,nssv1758386,nssv1758463,nssv1758446,nssv1758460,nssv1758397,nssv1758464,nssv1758379,nssv1758422,nssv1758390,nssv1758443,nssv1758372,nssv1758461,nssv1758385,nssv1758417,nssv1758382,nssv1758403,nssv1758388,nssv1758431,nssv1758454,nssv1758419,nssv1758369,nssv1758437,nssv1758453,nssv1758442,nssv1758380,nssv1758428,nssv1758445,nssv1758457,nssv1758447,nssv1758393,nssv1758392,nssv1758406,nssv1758374,nssv1758405,nssv1758450,nssv1758459,nssv1758452,nssv1758441,nssv1758399,nssv1758456,nssv1758389,nssv1758402,nssv1758371,nssv1758418,nssv1758449,nssv1758423,nssv1758378,nssv1758435,nssv1758381,nssv1758426,nssv1758373,nssv1758401,nssv1758451,nssv1758455,nssv1758448,nssv1758458,nssv1758462,nssv1758368,nssv1758429,nssv1758398,nssv1758409,nssv1758400,nssv1758394,nssv1758440,nssv1758410,nssv1758407,nssv1758439,nssv1758404,nssv1758416,nssv1758425,nssv1758438,nssv1758432,nssv1758411,nssv1758391,nssv1758415,nssv1758420,nssv1758414,nssv1758434,nssv1758424,nssv1758430,nssv1758433 M 97 10 0 RBBP4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3429895 1 32908757 32908764 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863688 M 185 1 0 RBBP4 NA12005 nsv945873 1 32917893 32918696 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1758482,nssv1758507,nssv1758475,nssv1758504,nssv1758469,nssv1758510,nssv1758484,nssv1758517,nssv1758496,nssv1758521,nssv1758467,nssv1758512,nssv1758473,nssv1758560,nssv1758481,nssv1758497,nssv1758478,nssv1758531,nssv1758550,nssv1758529,nssv1758476,nssv1758535,nssv1758480,nssv1758530,nssv1758493,nssv1758524,nssv1758472,nssv1758513,nssv1758487,nssv1758522,nssv1758543,nssv1758511,nssv1758474,nssv1758527,nssv1758479,nssv1758488,nssv1758494,nssv1758528,nssv1758477,nssv1758552,nssv1758542,nssv1758514,nssv1758548,nssv1758533,nssv1758466,nssv1758556,nssv1758546,nssv1758492,nssv1758485,nssv1758518,nssv1758549,nssv1758501,nssv1758483,nssv1758540,nssv1758547,nssv1758558,nssv1758544,nssv1758509,nssv1758545,nssv1758508,nssv1758489,nssv1758557,nssv1758470,nssv1758519,nssv1758486,nssv1758505,nssv1758471,nssv1758537,nssv1758468,nssv1758554,nssv1758551,nssv1758539,nssv1758534,nssv1758523,nssv1758538,nssv1758532,nssv1758500,nssv1758536,nssv1758553,nssv1758491,nssv1758525,nssv1758559,nssv1758499,nssv1758490,nssv1758555,nssv1758515,nssv1758498,nssv1758465,nssv1758526,nssv1758561,nssv1758503,nssv1758502,nssv1758541,nssv1758495,nssv1758516,nssv1758520,nssv1758506 M 97 10 0 RBBP4,SYNC HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509158 1 32929901 33022008 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619789 M 4 1 0 KIAA1522,SYNC,YARS NA10860 nsv311 1 32949046 32968932 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8951 M 9 1 0 "" NA12156 nsv822265 1 32967265 32968667 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440808 M 31 1 0 "" NA18969 nsv322 1 32996547 33020183 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8957 M 9 0 1 KIAA1522,YARS NA12156 nsv516302 1 33093188 33152695 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699367,nssv667416,nssv696432,nssv670847,nssv672465,nssv668150,nssv661821,nssv687923,nssv668935 M 2026 0 9 FNDC5,HPCA,S100PBP,TMEM54 nsv509169 1 33181825 33270093 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619790 M 4 1 0 AK2,RNF19B NA10860 nsv834602 1 33185879 33354409 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444473 M 95 0 1 ADC,AK2,RNF19B nsv545962 1 33220807 33367799 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712151 M 17421 0 1 ADC,AK2 nsv512734 1 33224583 33224995 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625360 M 1 1 0 "" 1 esv3348537 1 33224597 33224611 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740966 M 185 1 0 "" NA19240 nsv945874 1 33248174 33249107 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759188,nssv1759272,nssv1759196,nssv1759252,nssv1759263,nssv1759251,nssv1759197,nssv1759273,nssv1759195,nssv1759211,nssv1759256,nssv1759232,nssv1758563,nssv1759271,nssv1759189,nssv1759230,nssv1759191,nssv1759220,nssv1759194,nssv1759221,nssv1759198,nssv1759240,nssv1759206,nssv1759266,nssv1759190,nssv1759246,nssv1759185,nssv1759205,nssv1759259,nssv1758562,nssv1759186,nssv1759241,nssv1759180,nssv1759203,nssv1759200,nssv1759265,nssv1759184,nssv1759237,nssv1759257,nssv1759224,nssv1759264,nssv1759267,nssv1759192,nssv1759201,nssv1759187,nssv1759239,nssv1759262,nssv1759210,nssv1759255,nssv1759222,nssv1759209,nssv1759245,nssv1759202,nssv1759242,nssv1759207,nssv1759208,nssv1759258,nssv1759268,nssv1759182,nssv1759219,nssv1759260,nssv1759231,nssv1759181,nssv1759235,nssv1759261,nssv1759229,nssv1759193,nssv1759233,nssv1759199,nssv1759223,nssv1759183,nssv1759250,nssv1759236,nssv1759227,nssv1759228,nssv1759216,nssv1759213,nssv1759204,nssv1759274,nssv1759270,nssv1759212,nssv1759249,nssv1759238,nssv1759247,nssv1759254,nssv1759215,nssv1759217,nssv1759248,nssv1759253,nssv1759234,nssv1759226,nssv1759214,nssv1759269,nssv1759244,nssv1759243,nssv1759225,nssv1759218 M 97 10 0 AK2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2080204 1 33248839 33251558 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4892698 M 1 0 1 AK2 NA18507 esv7538 1 33248869 33251543 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29979 M 1 0 0 AK2 esv2326918 1 33251509 33259617 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4754145 M 1 0 1 AK2 NA18507 esv1076420 1 33290084 33290084 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3933980 M 2 1 0 "" HuRef nsv480563 1 33382365 33382365 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015337 M 9 0 0 "" esv1009865 1 33423449 33426525 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565473 M 3 1 0 "" HuRef esv3333295 1 33424161 33425040 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652083 M 185 1 0 "" NA19240 nsv512735 1 33424398 33425033 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625361 M 1 1 0 "" 1 esv3395521 1 33424875 33424875 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740967 M 185 1 0 "" NA19240 esv3393577 1 33425043 33425234 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740968 M 185 1 0 "" NA19240 nsv520532 1 33463285 33468744 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697472 M 2026 0 1 "" nsv545963 1 33492229 33592721 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712152 M 17421 0 1 A3GALT2,MIR3605,PHC2,ZNF362 nsv524709 1 33504779 33510013 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700693 M 2026 0 1 ZNF362 nsv522364 1 33504779 33605520 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695144 M 2026 0 1 A3GALT2,MIR3605,PHC2,ZNF362 nsv516693 1 33557214 33592721 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv657897,nssv687609,nssv689909,nssv670196 M 2026 0 4 A3GALT2,MIR3605,PHC2 nsv834613 1 33572793 33734375 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444484 M 95 1 0 PHC2,ZSCAN20 nsv476125 1 33575543 33575543 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011119 M 9 1 0 PHC2 NA12878 esv1384773 1 33594482 33594482 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3757381 M 2 1 0 PHC2 HuRef nsv333 1 33629945 33675095 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8973 M 9 0 1 "" NA12156 nsv161059 1 33643387 33649647 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179637 M 24 "" nsv344 1 33706402 33727595 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1070,nssv9819 M 9 2 0 ZSCAN20 NA18507,NA19240 nsv945875 1 33739346 33740392 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759280,nssv1759340,nssv1759351,nssv1759341,nssv1759289,nssv1759332,nssv1759293,nssv1759313,nssv1759294,nssv1759308,nssv1759278,nssv1759338,nssv1759279,nssv1759314,nssv1759291,nssv1759317,nssv1759295,nssv1759309,nssv1759283,nssv1759328,nssv1759286,nssv1759331,nssv1759277,nssv1759337,nssv1759353,nssv1759342,nssv1759288,nssv1759329,nssv1759284,nssv1759322,nssv1759349,nssv1759323,nssv1759297,nssv1759334,nssv1759345,nssv1759318,nssv1759281,nssv1759302,nssv1759290,nssv1759344,nssv1759303,nssv1759321,nssv1759276,nssv1759343,nssv1759352,nssv1759315,nssv1759292,nssv1759333,nssv1759346,nssv1759336,nssv1759304,nssv1759319,nssv1759287,nssv1759326,nssv1759354,nssv1759311,nssv1759348,nssv1759298,nssv1759282,nssv1759307,nssv1759350,nssv1759330,nssv1759347,nssv1759324,nssv1759299,nssv1759335,nssv1759306,nssv1759316,nssv1759285,nssv1759305,nssv1759296,nssv1759300,nssv1759320,nssv1759325,nssv1759275,nssv1759312,nssv1759339,nssv1759301,nssv1759310,nssv1759327 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv355 1 33774181 33807836 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5476 M 9 1 0 CSMD2 NA19129 nsv819833 1 33797262 33797607 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418793 M 2 1 0 CSMD2 AK1 esv22194 1 33801325 33802207 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15686 M 40 0 1 CSMD2 NA19147 nsv518591 1 33801657 33805004 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696037 M 2026 0 1 CSMD2 esv25436 1 33813677 33815418 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9843 M 40 0 2 CSMD2 NA12006,NA12878 nsv366 1 33867154 33899542 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4102 M 9 1 0 CSMD2 NA12878 nsv524359 1 33983119 33985987 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700270 M 2026 1 0 CSMD2 nsv509180 1 34002911 34088610 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621093 M 4 1 0 CSMD2 NA15510 esv3423069 1 34052649 34052690 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898750,essv8898751 M 185 2 0 CSMD2 NA07357,NA11831 esv3307875 1 34052665 34052666 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760469,essv7747604 M 185 2 0 CSMD2 NA07357,NA11831 esv27629 1 34066809 34067434 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13302 M 40 0 1 CSMD2 NA19257 nsv834624 1 34078260 34244419 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444495 M 95 0 1 CSMD2,HMGB4,LOC402779 esv34112 1 34100866 34183579 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990721 M 270 0 0 CSMD2,HMGB4,LOC402779 esv25885 1 34179535 34184619 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15068 M 40 0 1 CSMD2 NA12044 nsv834635 1 34191925 34384562 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444506 M 95 1 0 CSMD2 nsv470709 1 34193283 34697183 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547725,nssv547722,nssv547724 M 443 3 0 C1orf94,CSMD2 HGDP00890,HGDP00982,HGDP00983 nsv545964 1 34195799 34693662 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173812 M 17421 1 0 C1orf94,CSMD2 HGDP00983 nsv476113 1 34260151 34260151 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018444 M 9 1 0 CSMD2 NA12878 nsv834646 1 34286753 34461293 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444518 M 95 1 0 C1orf94,CSMD2 nsv461062 1 34316717 34319281 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537511 M 1557 0 1 CSMD2 HGDP01317 nsv545965 1 34316717 34319281 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173813 M 17421 0 1 CSMD2 HGDP01317 esv2267346 1 34340556 34341056 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4953377 M 1 0 1 CSMD2 NA18507 nsv834657 1 34340673 34517053 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444529 M 95 1 0 C1orf94,CSMD2 esv1307103 1 34340765 34340860 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3968445 M 2 0 1 CSMD2 HuRef nsv158970 1 34340791 34340885 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177548 M 24 CSMD2 nsv506926 1 34370267 34376267 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619231,nssv617529,nssv623267,nssv620650 M 4 0 0 CSMD2 CHM,NA10860,NA15510,NA18994 esv3446717 1 34408931 34408941 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898756,essv8898757,essv8898759,essv8898760,essv8898752,essv8898755,essv8898753,essv8898754,essv8898761 M 185 9 0 C1orf94 NA18499,NA18504,NA18508,NA18516,NA18871,NA18909,NA19093,NA19108,NA19210 nsv834669 1 34421604 34599428 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444540 M 95 1 0 C1orf94 nsv545966 1 34437806 34452906 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712153 M 17421 0 1 C1orf94 nsv475181 1 34455105 34455105 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019223 M 9 1 0 C1orf94 NA19240 nsv377 1 34528557 34558810 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2038 M 9 1 0 "" NA18555 nsv521016 1 34537561 34556271 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697737 M 2026 0 1 "" esv3330939 1 34539562 34539562 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740969 M 185 1 0 "" NA19240 nsv524723 1 34562882 34627215 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700709 M 2026 1 0 "" nsv528365 1 34594418 34607545 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704952 M 2026 0 1 "" nsv388 1 34636134 34681258 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8984 M 9 0 1 "" NA12156 nsv521683 1 34639243 34639955 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698303 M 2026 0 1 "" esv2760087 1 34699464 34705673 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005280,essv7005282,essv7005281,essv7005277,essv7005279 M 1109 0 5 "" RW_0047,RW_0105,RW_0146,RW_0180,RW_0582 esv2497338 1 34779251 34779683 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5255546 M 1 1 0 "" NA18507 nsv10084 1 34847046 34853646 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv13436 M 31 0 1 "" NA19007 nsv1013373 1 34855555 34877066 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470570,nssv3477638,nssv3480981 M 29084 0 3 "" dgv146n100 1 34861071 34877066 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003697,nsv1002546,nsv1008561,nsv1001313,nsv1011406,nsv997969 M 29084 0 29 "" esv2760077 1 34861071 34886855 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027279,essv7027191,essv7027246,essv7027557,essv7027368,essv7024411,essv7027135,essv7024855,essv7027068,essv7027479,essv7024744,essv7024633,essv7027179,essv7025633,essv7027390,essv7027224,essv7027468,essv7026633,essv7025966,essv7024300,essv7027546,essv7025077,essv7026188,essv7027501,essv7026855,essv7027568,essv7027357,essv7027579,essv7027302,essv7027524,essv7027157,essv7026411,essv7026744,essv7027490,essv7025189,essv7027346,essv7025744,essv7027657,essv7023965,essv7027590,essv7024522,essv7027324,essv7027601,essv7027612,essv7027435,essv7027401,essv7027057,essv7027623,essv7027257,essv7027379,essv7027424,essv7027635,essv7024966,essv7027646,essv7026300,essv7024078,essv7027213,essv7027113,essv7027446,essv7026522,essv7027091,essv7027268,essv7027202,essv7027080,essv7027102,essv7026077,essv7027168,essv7027413,essv7027535,essv7027046,essv7026966,essv7027457,essv7024189,essv7027335,essv7027235,essv7025300,essv7023854,essv7025522,essv7027313,essv7027512,essv7027146,essv7025855,essv7023632,essv7027124,essv7027290,essv7025411,essv7023743 M 1109 0 87 "" SW_0006,SW_0009,SW_0029,SW_0045,SW_0046,SW_0061,SW_0063,SW_0073,SW_0076,SW_0120,SW_0141,SW_0145,SW_0170,SW_0173,SW_0197,SW_0198,SW_0216,SW_0225,SW_0226,SW_0239,SW_0505,SW_0576,SW_0578,SW_0581,SW_0586,SW_0605,SW_0607,SW_0621,SW_0623,SW_0628,SW_0635,SW_0640,SW_0641,SW_0663,SW_0665,SW_0701,SW_0818,SW_0820,SW_0829,SW_0835,SW_0841,SW_0859,SW_0869,SW_0875,SW_0883,SW_0889,SW_1023,SW_1043,SW_1045,SW_1051,SW_1079,SW_1089,SW_1101,SW_1111,SW_1112,SW_1113,SW_1119,SW_1122,SW_1125,SW_1126,SW_1127,SW_1131,SW_1150,SW_1168,SW_1176,SW_1180,SW_1189,SW_1194,SW_1198,SW_1232,SW_1270,SW_1273,SW_1294,SW_1317,SW_1380,SW_1395,SW_1408,SW_1433,SW_1439,SW_1440,SW_1483,SW_1511,SW_1517,SW_1520,SW_1539,SW_1569,SW_1570 nsv243 1 34862127 34887178 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv243 M 1 0 1 "" NA15510 nsv399 1 34862127 34893747 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6567,nssv4111,nssv10904 M 9 0 3 "" NA12156,NA12878,NA15510 dgv147n100 1 34863336 34889136 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007837,nsv1009991,nsv1003396 M 29084 0 6 "" esv32563 1 34867574 34883404 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv101290,essv96198,essv94955 M 51 3 0 "" 21805,22007,22231 nsv511144 1 34868239 34885771 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625599 M 1 0 1 "" 1 nsv947425 1 34869269 34885851 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761976 M 97 0 1 "" HGDP01029 nsv10095 1 34869617 34884877 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv12761,nssv14076,nssv14416 M 31 0 3 "" NA10863,NA12872,NA18552 nsv545967 1 34870107 34884410 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712154 M 17421 0 1 "" dgv2n17 1 34870107 34885771 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437368,nsv437035,nsv437146,nsv437257 M 60 0 4 "" NA10830,NA10854,NA12753,NA12878 nsv511688 1 34873412 34885449 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626327 M 1 0 1 "" 1 esv1009124 1 34873811 34890553 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564360 M 3 0 1 "" HuRef nsv498669 1 34874008 34884565 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585452 M 9 0 1 "" esv28454 1 34874894 34884557 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19701 M 40 0 14 "" NA07037,NA07045,NA12156,NA12414,NA12489,NA12828,NA12878,NA15510,NA18858,NA18861,NA18907,NA19099,NA19108,NA19147 dgv148n100 1 34875229 34890618 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001400,nsv1001886,nsv1000255 M 29084 0 64 "" nsv442849 1 34875241 34877078 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617764,nssv1617790,nssv1617768,nssv1617770,nssv1617799,nssv1617757,nssv1617759,nssv1617783,nssv1617761,nssv1617807,nssv1617796,nssv1617774,nssv1617784,nssv1617785,nssv1617779,nssv1617778,nssv1617756,nssv1617800,nssv1617812,nssv1617767,nssv1617754,nssv1617781,nssv1617788,nssv1617749,nssv1617775,nssv1617760,nssv1617804,nssv1617748,nssv1617776,nssv1617751,nssv1617811,nssv1617746,nssv1617766,nssv1617772,nssv1617810,nssv1617786,nssv1617753,nssv1617755,nssv1617797,nssv1617805,nssv1617801,nssv1617803,nssv1617787,nssv1617765,nssv1617752,nssv1617792,nssv1617793,nssv1617808,nssv1617763,nssv1617777,nssv1617794,nssv1617762,nssv1617809,nssv1617782,nssv1617789,nssv1617773,nssv1617795,nssv1617798,nssv1617806,nssv1617771,nssv1617750 M 270 0 61 "" NA06993,NA07034,NA07056,NA07345,NA07348,NA07357,NA10830,NA10854,NA10856,NA10863,NA11829,NA11839,NA11881,NA11882,NA11992,NA11995,NA12145,NA12154,NA12156,NA12234,NA12249,NA12264,NA12751,NA12753,NA12763,NA12864,NA12865,NA12872,NA12873,NA12874,NA12878,NA12892,NA18550,NA18552,NA18562,NA18566,NA18570,NA18582,NA18612,NA18632,NA18633,NA18636,NA18858,NA18861,NA18870,NA18940,NA18964,NA19092,NA19094,NA19099,NA19137,NA19138,NA19139,NA19171,NA19192,NA19194,NA19203,NA19206,NA19207,NA19208,NA19223 esv2422091 1 34875241 34880863 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5065650,essv5160747,essv5101794,essv5123282,essv5128137,essv5122040,essv5021016,essv5061612,essv5023849,essv5066682,essv5054883,essv5089133,essv5100815,essv5100007,essv5031856,essv5019836,essv5073095,essv5030610,essv5152476,essv5122351,essv5125045,essv5063361,essv5054112,essv5097140,essv5044338,essv5006930,essv5061851,essv5031426,essv5095728,essv5080690,essv5146925,essv5046773,essv5043462,essv5058708,essv5069261,essv5007150,essv5035657,essv5029122,essv5158290,essv5082307,essv5127008,essv5076095,essv5032936,essv5015066,essv5155019,essv5066310,essv5117775,essv5034585,essv5099758,essv5094681,essv5059359,essv5104255,essv5100341,essv5050001,essv5107245,essv5155472,essv5077926,essv5035493,essv5002846,essv5049889,essv5012029,essv5066872,essv5148240,essv5158294,essv5086476,essv5059648,essv5044945,essv5051055,essv5090758,essv5056965,essv5014723,essv5126455,essv5148665,essv5032805,essv5102747,essv5039338,essv5065098,essv5138524,essv5022114,essv5044591,essv5004171,essv5137350,essv5100934,essv5051575,essv5120273,essv5017119,essv5008006,essv5135987,essv5143522,essv5095113,essv5072436,essv5076707,essv5081074,essv5152596,essv5123331,essv5018780,essv5041477,essv5026816,essv5062426,essv5128919,essv5109643,essv5072649,essv5094315,essv5135509,essv5151621,essv5078719,essv5156574,essv5100714,essv5124441,essv5061839,essv5044326,essv5027449,essv5016096,essv5076930,essv5092792,essv5112317,essv5119576,essv5054733,essv5027526,essv5083084,essv5110657,essv5020020,essv5005842,essv5069035,essv5139012,essv5124550,essv5063436,essv5078345,essv5058619,essv5095052,essv5046582,essv5012801,essv5080889,essv5058108,essv5115531,essv5142758,essv5116283,essv5043757,essv5014715,essv5131045,essv5135585,essv5104277,essv5117395,essv5093135,essv5141281,essv5055276,essv5041405,essv5078515,essv5030341,essv5012186,essv5138703,essv5136799,essv5018069,essv5002809,essv5121587,essv5131138,essv5051506,essv5090629,essv5118275,essv5149906,essv5044536,essv5028088,essv5144292,essv5102019,essv5145647,essv5046658,essv5044735,essv5051811,essv5118220,essv5117486,essv5027975,essv5010219,essv5106068,essv5082754,essv5123031,essv5076121,essv5067966,essv5006536,essv5035746,essv5112045,essv5041588,essv5048243,essv5157296,essv5140562,essv5131067,essv5134202,essv5094208,essv5096541,essv5058389,essv5077086,essv5051329,essv5056215,essv5033796,essv5135363,essv5049488,essv5115252,essv5103589,essv5148545,essv5107416,essv5089503,essv5017112,essv5118087,essv5147293,essv5056262,essv5071735,essv5131276,essv5051221,essv5095850,essv5030860,essv5127762,essv5134632,essv5016222,essv5038399,essv5149077,essv5132508,essv5007480,essv5106134,essv5030971,essv5087018,essv5041738,essv5150440,essv5118529,essv5010301,essv5105716,essv5028872,essv5046052,essv5080212,essv5018448,essv5120843,essv5096860,essv5050635,essv5127877,essv5069167,essv5129814,essv5056393,essv5033697,essv5156600,essv5095660,essv5096667,essv5160957,essv5031408,essv5078571,essv5144804,essv5072057,essv5022634,essv5018078,essv5129127,essv5148825,essv5023645,essv5065479,essv5068275,essv5002230,essv5088458,essv5057014,essv5075462,essv5089519,essv5101634,essv5087710,essv5088494,essv5006844,essv5118463,essv5158912,essv5023666,essv5022709,essv5027320,essv5056269,essv5066826,essv5120430,essv5084194,essv5144539,essv5114540,essv5005201,essv5112939,essv5157891,essv5116978,essv5025099,essv5086158,essv5044538 M 1184 0 278 "" NA06984,NA06993,NA06995,NA06997,NA07014,NA07031,NA07037,NA07045,NA07051,NA07056,NA07345,NA07348,NA07357,NA10830,NA10836,NA10853,NA10854,NA10856,NA10863,NA10864,NA10865,NA11829,NA11839,NA11843,NA11881,NA11882,NA11891,NA11893,NA11992,NA11995,NA12145,NA12154,NA12156,NA12234,NA12249,NA12264,NA12344,NA12347,NA12348,NA12375,NA12376,NA12399,NA12489,NA12751,NA12753,NA12763,NA12766,NA12775,NA12817,NA12828,NA12829,NA12830,NA12864,NA12865,NA12872,NA12873,NA12874,NA12878,NA12892,NA17965,NA17976,NA17995,NA17996,NA18101,NA18102,NA18112,NA18138,NA18149,NA18155,NA18484,NA18486,NA18497,NA18499,NA18520,NA18544,NA18548,NA18550,NA18552,NA18562,NA18566,NA18570,NA18582,NA18595,NA18612,NA18626,NA18630,NA18632,NA18633,NA18634,NA18636,NA18638,NA18643,NA18674,NA18702,NA18704,NA18747,NA18858,NA18861,NA18870,NA18940,NA18962,NA18964,NA18977,NA19001,NA19031,NA19036,NA19046,NA19057,NA19080,NA19087,NA19094,NA19095,NA19097,NA19099,NA19107,NA19108,NA19109,NA19117,NA19121,NA19123,NA19137,NA19138,NA19139,NA19147,NA19148,NA19171,NA19174,NA19178,NA19180,NA19181,NA19185,NA19186,NA19192,NA19194,NA19197,NA19199,NA19203,NA19206,NA19207,NA19208,NA19223,NA19224,NA19226,NA19235,NA19237,NA19248,NA19249,NA19308,NA19310,NA19315,NA19316,NA19359,NA19371,NA19373,NA19383,NA19384,NA19390,NA19393,NA19429,NA19430,NA19437,NA19445,NA19446,NA19448,NA19449,NA19452,NA19455,NA19463,NA19472,NA19625,NA19651,NA19652,NA19653,NA19660,NA19664,NA19669,NA19670,NA19671,NA19685,NA19708,NA19714,NA19716,NA19720,NA19721,NA19747,NA19756,NA19757,NA19761,NA19763,NA19774,NA19775,NA19779,NA19783,NA19784,NA19834,NA19836,NA19900,NA19902,NA19916,NA19985,NA20126,NA20276,NA20282,NA20284,NA20357,NA20358,NA20508,NA20534,NA20538,NA20541,NA20544,NA20582,NA20586,NA20588,NA20761,NA20765,NA20768,NA20770,NA20775,NA20783,NA20787,NA20792,NA20795,NA20805,NA20808,NA20828,NA20849,NA20850,NA20853,NA20854,NA20869,NA20903,NA20907,NA20910,NA21098,NA21106,NA21113,NA21118,NA21123,NA21301,NA21311,NA21312,NA21313,NA21314,NA21320,NA21333,NA21339,NA21359,NA21361,NA21362,NA21367,NA21381,NA21383,NA21399,NA21401,NA21403,NA21404,NA21408,NA21423,NA21438,NA21439,NA21447,NA21494,NA21513,NA21514,NA21520,NA21521,NA21522,NA21576,NA21599,NA21601,NA21611,NA21613,NA21617,NA21619,NA21685,NA21686,NA21825 esv2760081 1 34875241 34886855 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005343,essv7005340,essv7005354,essv7005349,essv7005329,essv7005364,essv7005361,essv7005342,essv7005346,essv7005333,essv7005318,essv7005307,essv7005350,essv7005306,essv7005360,essv7005327,essv7005317,essv7005365,essv7005316,essv7005319,essv7005313,essv7005309,essv7005347,essv7005295,essv7005308,essv7005283,essv7005355,essv7005332,essv7005362,essv7005290,essv7005315,essv7005288,essv7005363,essv7005310,essv7005339,essv7005284,essv7005299,essv7005291,essv7005304,essv7005325,essv7005311,essv7005322,essv7005353,essv7005337,essv7005298,essv7005351,essv7005335,essv7005330,essv7005341,essv7005305,essv7005294,essv7005344,essv7005338,essv7005358,essv7005331,essv7005296,essv7005285,essv7005352,essv7005359,essv7005302,essv7005292,essv7005328,essv7005286,essv7005357,essv7005348,essv7005297,essv7005303,essv7005293,essv7005324,essv7005320,essv7005321,essv7005336,essv7005326,essv7005287,essv7005314,essv7005366 M 1109 0 76 "" RW_0003,RW_0005,RW_0007,RW_0008,RW_0012,RW_0014,RW_0022,RW_0023,RW_0029,RW_0031,RW_0041,RW_0053,RW_0067,RW_0072,RW_0077,RW_0085,RW_0099,RW_0103,RW_0106,RW_0122,RW_0123,RW_0128,RW_0131,RW_0132,RW_0136,RW_0137,RW_0140,RW_0142,RW_0143,RW_0144,RW_0147,RW_0156,RW_0158,RW_0164,RW_0166,RW_0168,RW_0173,RW_0175,RW_0179,RW_0183,RW_0185,RW_0186,RW_0187,RW_0189,RW_0193,RW_0203,RW_0209,RW_0210,RW_0212,RW_0227,RW_0246,RW_0249,RW_0255,RW_0256,RW_0257,RW_0260,RW_0266,RW_0284,RW_0296,RW_0309,RW_0316,RW_0326,RW_0327,RW_0333,RW_0341,RW_0357,RW_0359,RW_0529,RW_0579,RW_0587,RW_0595,RW_0606,RW_0611,RW_0612,RW_0623,RW_0648 nsv822276 1 34876536 34884526 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422366,nssv1434165,nssv1435650,nssv1423954 M 31 0 4 "" NA18552,NA18566,NA18570,NA18582 nsv513985 1 34876736 34877140 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2861638,nssv2858028,nssv2857992,nssv2863339,nssv2858026,nssv2865174,nssv2861077,nssv2858664,nssv2858022,nssv2863542,nssv2857971,nssv2858009,nssv2858014,nssv2857967,nssv2858001,nssv2857975,nssv2857970,nssv2863029,nssv2858004,nssv2861437,nssv2857999,nssv2857989,nssv2857981,nssv2858003,nssv2858002,nssv2858818,nssv2857998,nssv2858027,nssv2860378,nssv2861337,nssv2858019,nssv2857983,nssv2864956,nssv2865387,nssv2858021,nssv2863088,nssv2860549,nssv2858010,nssv2866890,nssv2857988,nssv2862459,nssv2857969,nssv2858020,nssv2857996,nssv2868055,nssv2857968,nssv2857985,nssv2857990,nssv2857986,nssv2857976,nssv2860735,nssv2858024,nssv2865357,nssv2857991,nssv2859410,nssv2857979,nssv2860025,nssv2857993,nssv2861903,nssv2860609,nssv2858016,nssv2858015,nssv2858008,nssv2857978,nssv2864771,nssv2866301,nssv2858018,nssv2863199,nssv2857997,nssv2866161,nssv2858013,nssv2864822,nssv2858005,nssv2859932,nssv2858012,nssv2858023,nssv2857977,nssv2857995,nssv2860691,nssv2867255,nssv2863157,nssv2863626,nssv2868222,nssv2858007,nssv2857987,nssv2865717,nssv2857972,nssv2867963,nssv2857980,nssv2866546,nssv2858011,nssv2857984,nssv2858025,nssv2866837,nssv2859234,nssv2861766,nssv2858006,nssv2857982,nssv2858017,nssv2857994,nssv2857974,nssv2862540,nssv2866629,nssv2857973,nssv2866141,nssv2861845,nssv2858000,nssv2865609,nssv2861010 M 2366 0 109 "" NA06995,NA07014,NA07031,NA07037,NA07051,NA10830,NA10836,NA10856,NA10863,NA10864,NA11829,NA11843,NA11893,NA11992,NA12145,NA12234,NA12249,NA12264,NA12274,NA12329,NA12344,NA12347,NA12375,NA12376,NA12399,NA12414,NA12489,NA12751,NA12766,NA12775,NA12817,NA12827,NA12828,NA12829,NA12830,NA12864,NA12872,NA12874,NA12878,NA12892,NA18484,NA18486,NA18488,NA18497,NA18499,NA18550,NA18552,NA18562,NA18566,NA18570,NA18612,NA18633,NA18861,NA18907,NA18964,NA19094,NA19095,NA19097,NA19099,NA19107,NA19108,NA19109,NA19117,NA19121,NA19123,NA19137,NA19138,NA19147,NA19148,NA19174,NA19178,NA19180,NA19181,NA19186,NA19190,NA19192,NA19194,NA19197,NA19199,NA19206,NA19208,NA19223,NA19224,NA19237,NA19248,NA19249,NA19252,NA21301,NA21312,NA21313,NA21359,NA21361,NA21362,NA21381,NA21383,NA21399,NA21401,NA21403,NA21404,NA21423,NA21438,NA21439,NA21447,NA21477,NA21494,NA21514,NA21599,NA21601,NA21686 nsv438366 1 34876909 34880863 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv470074,nssv470407,nssv469629,nssv470296,nssv470185,nssv469851,nssv469963,nssv469740 M 269 0 8 "" NA10830,NA10854,NA11839,NA12154,NA12753,NA12763,NA12878,NA12892 nsv516954 1 34879856 34880863 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv678549,nssv662596,nssv689139,nssv667647,nssv653936,nssv657127,nssv660609,nssv657434,nssv657451,nssv688198,nssv658164,nssv676478,nssv663637,nssv684742,nssv664843,nssv662263,nssv684981,nssv690846,nssv674550,nssv657679,nssv692397,nssv676247,nssv692641,nssv653496,nssv680832,nssv686521 M 2026 0 26 "" dgv226n54 1 34879856 34883734 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545976,nsv545977,nsv545970,nsv545969,nsv545975,nsv545968,nsv545971 M 17421 0 31 "" dgv227n54 1 34879856 34884410 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545983,nsv545984,nsv545978,nsv545979,nsv545973,nsv545972 M 17421 0 95 "" dgv228n54 1 34879856 34885771 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545974,nsv545985,nsv545980 M 17421 0 4 "" dgv229n54 1 34880863 34883734 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545981,nsv545982,nsv545986 M 17421 0 9 "" dgv230n54 1 34881477 34884410 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545987,nsv545989,nsv545990,nsv545988 M 17421 0 19 "" esv275560 1 34891253 34894026 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2586164,essv2585833 M 1250 1 1 "" esv29315 1 34954800 34956844 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16964 M 40 1 0 "" NA06985 nsv947426 1 34998713 35020553 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2759632 M 97 1 0 GJB3,GJB4 HGDP00998 esv1494656 1 35015905 35015905 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3784790 M 2 1 0 "" HuRef esv1201116 1 35015937 35015937 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4176670 M 2 1 0 "" HuRef nsv1012995 1 35024256 35122841 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700646 M 29084 1 0 DLGAP3,GJA4,GJB3,SMIM12 esv1003104 1 35028945 35033854 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565781 M 3 0 1 GJA4 HuRef nsv945876 1 35033317 35033998 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759358,nssv1759396,nssv1758801,nssv1758813,nssv1759373,nssv1758820,nssv1759372,nssv1759392,nssv1758803,nssv1758782,nssv1758805,nssv1758777,nssv1759369,nssv1759385,nssv1759379,nssv1758792,nssv1759374,nssv1758786,nssv1759386,nssv1759390,nssv1758802,nssv1759380,nssv1759364,nssv1759355,nssv1759359,nssv1759381,nssv1759375,nssv1758799,nssv1759371,nssv1758818,nssv1759368,nssv1759395,nssv1759367,nssv1759394,nssv1758809,nssv1758795,nssv1759384,nssv1758778,nssv1759377,nssv1758787,nssv1759366,nssv1759403,nssv1759361,nssv1758797,nssv1758807,nssv1758814,nssv1759370,nssv1758796,nssv1758808,nssv1758816,nssv1759356,nssv1759389,nssv1759383,nssv1758790,nssv1758810,nssv1758798,nssv1759365,nssv1759388,nssv1759362,nssv1759393,nssv1759360,nssv1759402,nssv1759363,nssv1758793,nssv1758806,nssv1759378,nssv1758804,nssv1758800,nssv1759357,nssv1758781,nssv1759376,nssv1758812,nssv1759397,nssv1758811,nssv1758784,nssv1758774,nssv1759391,nssv1758794,nssv1758783,nssv1758779,nssv1759401,nssv1758791,nssv1758819,nssv1758817,nssv1759398,nssv1758789,nssv1758776,nssv1759399,nssv1759382,nssv1759404,nssv1758785,nssv1758780,nssv1758788,nssv1758775,nssv1758815,nssv1759400,nssv1759387 M 97 10 0 GJA4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv4188 1 35040365 35040824 CNV loss Wang_et_al_2008 18987735 Sequencing essv26629 M 1 0 1 "" YH nsv545991 1 35040424 35051763 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712316,nssv712315,nssv712318,nssv712317,nssv712314,nssv712313 M 17421 0 6 "" esv23746 1 35073744 35074245 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21340 M 40 0 1 "" NA12749 nsv476831 1 35110519 35110519 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018847 M 9 1 0 DLGAP3 NA12878 esv3402535 1 35180441 35180501 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898762 M 185 1 0 "" NA12717 esv3305762 1 35180460 35180461 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7757693 M 185 1 0 "" NA12717 nsv411 1 35181003 35213514 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2058 M 9 1 0 "" NA18555 nsv511093 1 35228973 35254861 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624359 M 4 0 0 ZMYM6 NA18994 nsv508138 1 35235115 35254861 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620128 M 4 0 1 ZMYM6 NA15510 esv2448755 1 35287381 35289073 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5242554 M 1 0 1 "" NA18507 esv2012538 1 35288122 35289061 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4802032 M 1 0 1 "" NA18507 nsv422 1 35352348 35356053 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2066 M 9 1 0 ZMYM1 NA18555 nsv945877 1 35360118 35361120 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1758823,nssv1759802,nssv1758827,nssv1758861,nssv1758836,nssv1759807,nssv1758839,nssv1758868,nssv1758840,nssv1759816,nssv1758838,nssv1759815,nssv1758825,nssv1759814,nssv1759825,nssv1758869,nssv1758828,nssv1759840,nssv1758841,nssv1759832,nssv1758824,nssv1759812,nssv1758837,nssv1758863,nssv1758833,nssv1759799,nssv1758850,nssv1758862,nssv1759830,nssv1759809,nssv1758830,nssv1758860,nssv1758829,nssv1758857,nssv1758843,nssv1759818,nssv1758849,nssv1759839,nssv1759823,nssv1759817,nssv1759831,nssv1759808,nssv1758822,nssv1758864,nssv1758831,nssv1759836,nssv1759829,nssv1759835,nssv1758835,nssv1759820,nssv1759826,nssv1759810,nssv1758834,nssv1758867,nssv1758832,nssv1759801,nssv1759824,nssv1758848,nssv1759828,nssv1758865,nssv1758845,nssv1759833,nssv1758852,nssv1759819,nssv1759822,nssv1759803,nssv1758842,nssv1759811,nssv1758826,nssv1759798,nssv1759827,nssv1759813,nssv1758858,nssv1758847,nssv1758866,nssv1758846,nssv1758853,nssv1759797,nssv1759806,nssv1758851,nssv1758856,nssv1758870,nssv1759834,nssv1759838,nssv1758871,nssv1759821,nssv1758844,nssv1758821,nssv1759796,nssv1759805,nssv1758855,nssv1758854,nssv1759841,nssv1759837,nssv1759800,nssv1759804,nssv1758859 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509191 1 35361726 35409283 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617993 M 4 1 0 "" CHM nsv512736 1 35395196 35395413 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625362 M 1 1 0 "" 1 esv1688473 1 35395258 35395258 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3937525 M 2 1 0 "" HuRef nsv508149 1 35425375 35523857 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618971 M 4 0 1 SFPQ,ZMYM4 NA10860 nsv818134 1 35482364 35514250 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417263 M 112 0 1 ZMYM4 NA18593 nsv822287 1 35553084 35553673 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423955 M 31 1 0 ZMYM4 NA18582 esv8737 1 35569556 35569700 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31178 M 1 0 0 ZMYM4 nsv822298 1 35587625 35588785 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436334 M 31 0 1 ZMYM4 NA18542 nsv945878 1 35588914 35591979 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759920,nssv1759918,nssv1759852,nssv1759887,nssv1759863,nssv1759899,nssv1759847,nssv1759897,nssv1759853,nssv1759883,nssv1759860,nssv1759865,nssv1759861,nssv1759901,nssv1759850,nssv1759938,nssv1759928,nssv1759935,nssv1759846,nssv1759892,nssv1759855,nssv1759872,nssv1759927,nssv1759907,nssv1759858,nssv1759875,nssv1759845,nssv1759909,nssv1759856,nssv1759891,nssv1759873,nssv1759906,nssv1759925,nssv1759913,nssv1759864,nssv1759911,nssv1759871,nssv1759868,nssv1759857,nssv1759882,nssv1759843,nssv1759880,nssv1759926,nssv1759900,nssv1759870,nssv1759867,nssv1759866,nssv1759931,nssv1759859,nssv1759902,nssv1759923,nssv1759904,nssv1759921,nssv1759879,nssv1759919,nssv1759878,nssv1759862,nssv1759905,nssv1759854,nssv1759915,nssv1759851,nssv1759929,nssv1759922,nssv1759886,nssv1759844,nssv1759914,nssv1759848,nssv1759884,nssv1759849,nssv1759936,nssv1759924,nssv1759930,nssv1759917,nssv1759881,nssv1759916,nssv1759908,nssv1759933,nssv1759932,nssv1759842,nssv1759876,nssv1759912,nssv1759890,nssv1759895,nssv1759934,nssv1759877,nssv1759896,nssv1759893,nssv1759874,nssv1759889,nssv1759898,nssv1759903,nssv1759937,nssv1759888,nssv1759894,nssv1759910,nssv1759869,nssv1759885 M 97 10 0 ZMYM4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1012556 1 35651892 35941848 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473323 M 29084 1 0 KIAA0319L,NCDN,PSMB2,TFAP2E,ZMYM4 esv32554 1 35656892 35666141 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv100050 M 51 0 1 ZMYM4 22086 nsv945879 1 35658942 35660086 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759944,nssv1759989,nssv1760020,nssv1759990,nssv1759958,nssv1759998,nssv1760019,nssv1759988,nssv1759968,nssv1759980,nssv1759941,nssv1759995,nssv1759960,nssv1760007,nssv1759955,nssv1759966,nssv1759947,nssv1760032,nssv1760017,nssv1759993,nssv1759943,nssv1759962,nssv1759948,nssv1760001,nssv1759953,nssv1760014,nssv1759942,nssv1760010,nssv1759961,nssv1759971,nssv1760024,nssv1760015,nssv1760025,nssv1760006,nssv1759957,nssv1760035,nssv1759970,nssv1760003,nssv1759950,nssv1759969,nssv1759954,nssv1759965,nssv1759940,nssv1759975,nssv1760023,nssv1759994,nssv1760016,nssv1759991,nssv1759946,nssv1759999,nssv1759952,nssv1760008,nssv1759956,nssv1760031,nssv1759967,nssv1760028,nssv1760018,nssv1759996,nssv1759951,nssv1760026,nssv1759949,nssv1759964,nssv1760022,nssv1759997,nssv1759963,nssv1759982,nssv1759959,nssv1759939,nssv1759945,nssv1760012,nssv1760021,nssv1760002,nssv1760033,nssv1759972,nssv1760011,nssv1759984,nssv1759983,nssv1759973,nssv1759986,nssv1760027,nssv1760004,nssv1759974,nssv1759977,nssv1759976,nssv1760030,nssv1759981,nssv1760029,nssv1759979,nssv1760013,nssv1760005,nssv1759987,nssv1760034,nssv1759992,nssv1760009,nssv1760000,nssv1759985,nssv1759978 M 97 10 0 ZMYM4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv33735 1 35671707 35672683 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99911 M 51 1 0 KIAA0319L 22086 nsv433 1 35820645 35865600 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9000 M 9 0 1 PSMB2,TFAP2E NA12156 esv3335001 1 35827052 35829950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692309 M 185 1 0 TFAP2E NA19240 nsv834680 1 35898809 36130404 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444551 M 95 1 0 AGO1,AGO4,C1orf216,CLSPN nsv525430 1 36014615 36098783 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701556 M 2026 0 1 AGO4 nsv524683 1 36067219 36098783 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700654 M 2026 0 1 AGO4 nsv471862 1 36127382 36127382 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013037 M 9 1 0 AGO1 NA18555 nsv526837 1 36140367 36152720 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703194 M 2026 0 1 AGO1 nsv478018 1 36147339 36147339 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019007 M 9 1 0 AGO1 NA18517 dgv149n100 1 36185347 36270262 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002702,nsv1008562 M 29084 0 2 AGO3 nsv1009033 1 36188089 36241719 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482483 M 29084 0 1 AGO3 nsv1009992 1 36188089 36247981 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469781,nssv3463535 M 29084 1 1 AGO3 nsv998713 1 36195130 36246785 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479335 M 29084 1 0 AGO3 esv3435241 1 36247257 36247276 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593891 M 185 1 0 AGO3 NA18970 esv3305175 1 36247264 36247265 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7834588,essv7803705,essv7785756,essv7792022,essv7803961,essv7792849,essv7811080,essv7796143,essv7773424,essv7820854,essv7783245,essv7771530,essv7823185,essv7826793,essv7831975,essv7784603,essv7830912,essv7815543,essv7791401,essv7794426,essv7786301,essv7774912,essv7828265,essv7807597,essv7814638,essv7783169,essv7781898,essv7787272,essv7779060,essv7807020,essv7823512,essv7826354,essv7778399,essv7772990,essv7816524,essv7795063,essv7797139,essv7770166,essv7830527,essv7788319,essv7786745,essv7793477,essv7829273,essv7782369,essv7796570,essv7822139,essv7828923,essv7823714,essv7779723,essv7790991,essv7822663,essv7775819,essv7811187,essv7780452,essv7818033,essv7798307,essv7831468 M 185 57 0 AGO3 NA18486,NA18498,NA18502,NA18519,NA18520,NA18526,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18579,NA18582,NA18592,NA18593,NA18608,NA18609,NA18638,NA18853,NA18870,NA18871,NA18907,NA18909,NA18916,NA18944,NA18947,NA18948,NA18949,NA18951,NA18952,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18970,NA18973,NA19005,NA19108,NA19137,NA19138,NA19225,NA19238,NA19240 esv3371096 1 36247265 36247280 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898763,essv8898770,essv8898773,essv8898786,essv8898798,essv8898806,essv8898795,essv8898764,essv8898805,essv8898788,essv8898777,essv8898803,essv8898817,essv8898771,essv8898808,essv8898765,essv8898776,essv8898799,essv8898790,essv8898816,essv8898813,essv8898818,essv8898775,essv8898791,essv8898812,essv8898772,essv8898787,essv8898768,essv8898783,essv8898802,essv8898811,essv8898809,essv8898794,essv8898801,essv8898796,essv8898792,essv8898814,essv8898821,essv8898797,essv8898822,essv8898785,essv8898820,essv8898766,essv8898767,essv8898810,essv8898823,essv8898800,essv8898789,essv8898784,essv8898819,essv8898778,essv8898779,essv8898774,essv8898807 M 185 54 0 AGO3 NA18486,NA18498,NA18502,NA18519,NA18520,NA18526,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18579,NA18582,NA18592,NA18593,NA18608,NA18609,NA18638,NA18853,NA18870,NA18871,NA18907,NA18909,NA18916,NA18944,NA18947,NA18948,NA18949,NA18951,NA18952,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18973,NA19005,NA19108,NA19137,NA19138,NA19225 esv3335594 1 36247273 36247283 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674012,essv8674013 M 185 2 0 AGO3 NA19238,NA19240 esv3309407 1 36247274 36247275 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837169 M 185 1 0 AGO3 NA19239 nsv159158 1 36247282 36247282 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177736 M 24 AGO3 nsv518844 1 36269936 36304903 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694280 M 2026 0 1 AGO3 nsv834691 1 36297325 36476728 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444562,nssv1444573 M 95 0 2 ADPRHL2,COL8A2,MAP7D1,TEKT2,THRAP3,TRAPPC3 esv3329704 1 36329452 36331650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692312 M 185 1 0 ADPRHL2 NA19239 nsv545992 1 36329454 36399778 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712319 M 17421 0 1 ADPRHL2,COL8A2,MAP7D1,TRAPPC3 nsv471895 1 36352700 36352700 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013618 M 9 1 0 "" NA18555 esv3332926 1 36359907 36359915 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863689 M 185 1 0 "" NA12005 nsv545993 1 36364199 36425206 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712320 M 17421 0 1 MAP7D1,TRAPPC3 nsv10106 1 36373014 36389894 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv13748 M 31 1 0 TRAPPC3 NA12155 nsv545994 1 36385967 36482625 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712322,nssv712321 M 17421 0 2 MAP7D1,THRAP3,TRAPPC3 nsv545995 1 36388256 36524997 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712323,nssv712324 M 17421 0 2 MAP7D1,THRAP3,TRAPPC3 esv2758931 1 36392726 36659675 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757729 M 270 0 1 EVA1B,LSM10,MAP7D1,OSCP1,SH3D21,STK40,THRAP3,TRAPPC3 NA12802 nsv545996 1 36414316 36422642 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712325 M 17421 1 0 MAP7D1 nsv834702 1 36428818 36629919 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444584 M 95 0 1 EVA1B,SH3D21,STK40,THRAP3 nsv159975 1 36442938 36447154 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178553 M 24 "" esv1470236 1 36448916 36448916 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4103019 M 2 1 0 "" HuRef nsv545997 1 36466061 36568017 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712326 M 17421 0 1 EVA1B,SH3D21,THRAP3 esv2544592 1 36505647 36507205 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5335271 M 1 0 1 THRAP3 NA18507 esv2045078 1 36505769 36506259 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4505438 M 1 0 1 THRAP3 NA18507 esv2125715 1 36521628 36522091 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4852306 M 1 0 1 THRAP3 NA18507 esv1002750 1 36521805 36521856 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579615 M 3 0 1 THRAP3 HuRef esv1414937 1 36521856 36521908 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4244589 M 2 0 1 THRAP3 HuRef nsv160040 1 36521857 36521908 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178618 M 24 THRAP3 nsv444 1 36523762 36568167 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2067 M 9 0 1 EVA1B,SH3D21,THRAP3 NA18555 nsv945880 1 36524609 36525609 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760060,nssv1761030,nssv1760049,nssv1761054,nssv1760041,nssv1761032,nssv1761046,nssv1760087,nssv1760054,nssv1760081,nssv1760055,nssv1760082,nssv1761038,nssv1760084,nssv1760046,nssv1761034,nssv1760057,nssv1760078,nssv1760052,nssv1761047,nssv1761041,nssv1760093,nssv1760043,nssv1760097,nssv1761042,nssv1760073,nssv1761043,nssv1761035,nssv1760040,nssv1760071,nssv1760058,nssv1761051,nssv1760050,nssv1760095,nssv1760044,nssv1760070,nssv1761039,nssv1760075,nssv1760039,nssv1760083,nssv1760042,nssv1760085,nssv1760047,nssv1760088,nssv1760038,nssv1760059,nssv1760048,nssv1760068,nssv1761037,nssv1760086,nssv1761040,nssv1760076,nssv1760037,nssv1760074,nssv1760051,nssv1761029,nssv1761044,nssv1760063,nssv1761045,nssv1760090,nssv1760064,nssv1760103,nssv1760045,nssv1761055,nssv1760053,nssv1760101,nssv1760067,nssv1760089,nssv1760056,nssv1761036,nssv1760065,nssv1761050,nssv1760096,nssv1761048,nssv1761031,nssv1761028,nssv1760079,nssv1760066,nssv1760091,nssv1760077,nssv1760094,nssv1761049,nssv1760062,nssv1760100,nssv1760080,nssv1760092,nssv1760098,nssv1761052,nssv1761033,nssv1761053,nssv1760036,nssv1760099,nssv1760069,nssv1761056,nssv1760061,nssv1760102,nssv1760072 M 97 10 0 THRAP3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945882 1 36542361 36543330 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761069,nssv1761100,nssv1761066,nssv1761103,nssv1761078,nssv1761082,nssv1761067,nssv1761120,nssv1761062,nssv1761106,nssv1761074,nssv1761089,nssv1761085,nssv1761092,nssv1761135,nssv1759095,nssv1761077,nssv1761098,nssv1761086,nssv1761113,nssv1761076,nssv1761119,nssv1761075,nssv1761133,nssv1761136,nssv1759091,nssv1761070,nssv1761087,nssv1761064,nssv1761123,nssv1761073,nssv1761131,nssv1759082,nssv1761122,nssv1761065,nssv1761090,nssv1761072,nssv1761107,nssv1759085,nssv1761080,nssv1761079,nssv1761104,nssv1759083,nssv1761116,nssv1761137,nssv1761084,nssv1761058,nssv1761132,nssv1761138,nssv1761097,nssv1761134,nssv1761114,nssv1761068,nssv1761129,nssv1761081,nssv1761101,nssv1761061,nssv1761093,nssv1761060,nssv1761112,nssv1761088,nssv1761102,nssv1759084,nssv1761099,nssv1759081,nssv1761105,nssv1761059,nssv1761124,nssv1761063,nssv1761109,nssv1761071,nssv1761126,nssv1761127,nssv1759087,nssv1759094,nssv1761118,nssv1761083,nssv1761057,nssv1759090,nssv1761117,nssv1761128,nssv1761094,nssv1761130,nssv1759088,nssv1759092,nssv1761125,nssv1761095,nssv1761111,nssv1761121,nssv1761108,nssv1761115,nssv1761096,nssv1759089,nssv1759086,nssv1761110,nssv1759093,nssv1761091 M 97 10 0 THRAP3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv524394 1 36562133 36620353 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700312 M 2026 0 1 EVA1B,STK40 nsv475537 1 36609646 36609646 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017337 M 9 1 0 STK40 NA19240 nsv545998 1 36632339 36637289 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712327 M 17421 0 1 LSM10 nsv545999 1 36632339 36639950 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712328 M 17421 0 1 LSM10 nsv509202 1 36671474 36728356 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619791 M 4 1 0 CSF3R,MRPS15,OSCP1 NA10860 esv3365853 1 36692352 36694250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692313 M 185 1 0 MRPS15 NA19239 nsv461073 1 36697263 36733213 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537522 M 1557 0 1 CSF3R,MRPS15 1780862529_A nsv546000 1 36697263 36733213 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173814 M 17421 0 1 CSF3R,MRPS15 1780862529_A nsv520839 1 36700320 36748840 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697643 M 2026 0 1 CSF3R,MRPS15 esv1178181 1 36782350 36782418 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3795450 M 2 0 1 "" HuRef nsv509213 1 36797080 36870829 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619792 M 4 1 0 "" NA10860 dgv75e59 1 36806352 36808050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3380322,esv3383797,esv3377766 M 185 3 0 "" NA19238,NA19239,NA19240 esv3414335 1 36851352 36852750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692317 M 185 1 0 "" NA19240 nsv455 1 36900295 36933595 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9005 M 9 1 0 "" NA12156 nsv546001 1 36930532 37079868 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712329 M 17421 0 1 GRIK3 esv1494805 1 36938559 36938652 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3894677 M 2 0 1 "" HuRef nsv1003721 1 36954983 37087982 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700647 M 29084 1 0 GRIK3 esv3402915 1 36984244 36984263 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593913,essv9593902 M 185 2 0 "" NA11931,NA12815 esv3306764 1 36984246 36984247 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7767289,essv7765730 M 185 2 0 "" NA11931,NA12815 nsv478300 1 37000655 37000655 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017864 M 9 1 0 "" NA18507 esv2477261 1 37031693 37032214 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5280316 M 1 1 0 "" NA18507 nsv473098 1 37055776 37055776 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012125 M 9 1 0 GRIK3 NA19129 nsv834713 1 37117119 37281540 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444595 M 95 1 0 GRIK3 nsv522473 1 37175999 37188856 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705838 M 2026 0 1 GRIK3 esv2553528 1 37194989 37198175 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5325318 M 1 0 1 GRIK3 NA18507 esv2538711 1 37195105 37195892 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5264336 M 1 1 0 GRIK3 NA18507 esv1102722 1 37195642 37195642 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4046400 M 2 1 0 GRIK3 HuRef esv3151 1 37195932 37196389 CNV loss Wang_et_al_2008 18987735 Sequencing essv25592 M 1 0 1 GRIK3 YH esv2459868 1 37196379 37199082 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5370743 M 1 0 1 GRIK3 NA18507 esv7566 1 37196592 37198618 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30007 M 1 0 0 GRIK3 esv2906 1 37196734 37198627 CNV loss Wang_et_al_2008 18987735 Sequencing essv25347 M 1 0 1 GRIK3 YH esv23328 1 37196768 37198598 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10789 M 40 0 5 GRIK3 NA11931,NA12828,NA18511,NA18517,NA19240 nsv821045 1 37196768 37198598 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420303 M 1 1 0 GRIK3 NA10851 nsv546002 1 37197149 37197926 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712331,nssv712330,nssv712332,nssv712335,nssv712334,nssv712333 M 17421 0 6 GRIK3 dgv231n54 1 37197149 37198329 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546007,nsv546003,nsv546008,nsv546009 M 17421 0 6 GRIK3 dgv232n54 1 37197149 37198462 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546010,nsv546006,nsv546005,nsv546004 M 17421 5 0 GRIK3 nsv546011 1 37197628 37197806 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712347 M 17421 0 1 GRIK3 nsv546012 1 37197628 37197926 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712351,nssv712350,nssv712355,nssv712352,nssv712354,nssv712353,nssv712348,nssv712358,nssv712359,nssv712349,nssv712356,nssv712357 M 17421 0 12 GRIK3 nsv546013 1 37197720 37197926 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712360 M 17421 0 1 GRIK3 nsv466 1 37224605 37269238 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9013 M 9 0 1 GRIK3 NA12156 nsv834724 1 37281599 37442774 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444606 M 95 1 0 MIR4255 nsv509224 1 37306794 37427815 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619793 M 4 1 0 MIR4255 NA10860 nsv479121 1 37344371 37344371 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016105 M 9 0 0 "" nsv511689 1 37360718 37365223 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626328 M 1 0 1 "" 1 dgv150n100 1 37405411 37460005 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997970,nsv1003408,nsv1001914 M 29084 0 7 "" nsv999872 1 37408091 37440282 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463095 M 29084 0 1 "" dgv233n54 1 37408091 37456506 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546014,nsv546017 M 17421 0 2 "" nsv521436 1 37408091 37456506 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698046 M 2026 0 1 "" dgv234n54 1 37408091 37475919 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546015,nsv546016 M 17421 0 2 "" nsv477 1 37429025 37474144 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9019 M 9 0 1 "" NA12156 esv3352531 1 37459746 37459765 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593946 M 185 1 0 "" NA12043 nsv488 1 37465939 37499591 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1081 M 9 1 0 "" NA19240 nsv834735 1 37519245 37681373 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444617,nssv1444629 M 95 0 2 "" esv3429940 1 37560033 37560033 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740970 M 185 1 0 "" NA19240 esv3356635 1 37574311 37574311 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740971 M 185 1 0 "" NA19240 nsv499 1 37578710 37589060 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4120 M 9 1 0 "" NA12878 esv5617 1 37588957 37589426 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28058 M 1 0 0 "" dgv32n67 1 37588994 37590035 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822309,nsv822320 M 31 2 0 "" AK4,NA18570 esv4797 1 37589017 37589379 CNV loss Wang_et_al_2008 18987735 Sequencing essv27238 M 1 0 1 "" YH nsv160102 1 37589061 37589299 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178680 M 24 "" nsv519697 1 37637498 37638930 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696998 M 2026 0 1 "" esv2574190 1 37684179 37684696 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5390348 M 1 1 0 "" NA18507 nsv519551 1 37729963 37747866 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv656832,nssv684557 M 2026 2 0 MEAF6,MIR5581 nsv524834 1 37734200 37824172 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700835 M 2026 1 0 DNALI1,GNL2,MEAF6,MIR5581,SNIP1 nsv476724 1 37747751 37747751 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011429 M 9 1 0 MEAF6 NA12878 nsv834746 1 37775539 37939913 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444640 M 95 0 1 C1orf109,CDCA8,DNALI1,GNL2,RSPO1,SNIP1 nsv945883 1 37783204 37795307 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759105,nssv1759142,nssv1759114,nssv1759172,nssv1759113,nssv1759145,nssv1759115,nssv1759156,nssv1759120,nssv1759160,nssv1759112,nssv1759119,nssv1759109,nssv1760108,nssv1759116,nssv1760115,nssv1759174,nssv1759157,nssv1759107,nssv1759155,nssv1759125,nssv1759140,nssv1759102,nssv1759152,nssv1759108,nssv1759165,nssv1759177,nssv1759126,nssv1759118,nssv1759154,nssv1759175,nssv1760113,nssv1759124,nssv1759141,nssv1759097,nssv1759121,nssv1759127,nssv1759169,nssv1760104,nssv1759137,nssv1759103,nssv1759163,nssv1759179,nssv1759130,nssv1760106,nssv1760116,nssv1759098,nssv1759146,nssv1759106,nssv1759122,nssv1759111,nssv1759128,nssv1759099,nssv1759171,nssv1759173,nssv1759147,nssv1759178,nssv1759151,nssv1760105,nssv1759167,nssv1759176,nssv1759150,nssv1759100,nssv1759134,nssv1759110,nssv1759153,nssv1759117,nssv1759096,nssv1759104,nssv1759139,nssv1759101,nssv1760112,nssv1759168,nssv1759131,nssv1759159,nssv1759133,nssv1759136,nssv1760114,nssv1759161,nssv1759135,nssv1759166,nssv1760109,nssv1759144,nssv1759158,nssv1760107,nssv1759132,nssv1759138,nssv1759149,nssv1759143,nssv1759123,nssv1759148,nssv1759170,nssv1759164,nssv1759162,nssv1760111,nssv1759129,nssv1760110 M 97 10 0 DNALI1,SNIP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv988200 1 37848507 37848963 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564472 M 3 1 0 "" HuRef esv3503 1 37849886 37850106 CNV loss Wang_et_al_2008 18987735 Sequencing essv25944 M 1 0 1 RSPO1 YH esv992523 1 37849936 37850006 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585401 M 3 0 1 RSPO1 HuRef nsv160858 1 37849937 37850007 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179436 M 24 RSPO1 nsv527629 1 37894521 37899741 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704097 M 2026 0 1 "" esv3450650 1 37905352 37907550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692321 M 185 1 0 "" NA19239 nsv819737 1 37919829 37920400 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419008 M 2 0 1 C1orf109 AK1 nsv472046 1 37935282 37935282 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011990 M 9 1 0 CDCA8 NA18555 nsv519553 1 37961428 37965124 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv658587,nssv694242,nssv676228,nssv656833,nssv678161 M 2026 0 5 EPHA10 nsv525226 1 37961428 38000803 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701315 M 2026 0 1 EPHA10 esv2276987 1 37980649 37981175 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4970243 M 1 0 1 EPHA10 NA18507 esv1005346 1 37980833 37980995 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581260 M 3 0 1 EPHA10 HuRef esv994797 1 38011913 38013559 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565333 M 3 1 0 "" HuRef nsv510 1 38052636 38118191 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1091,nssv5491 M 9 2 0 INPP5B,MTF1 NA19129,NA19240 nsv506927 1 38055332 38061332 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619232,nssv623268,nssv620652 M 4 0 0 MTF1 NA10860,NA15510,NA18994 nsv945884 1 38079093 38082369 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760127,nssv1760187,nssv1760195,nssv1760204,nssv1760122,nssv1760143,nssv1760135,nssv1760183,nssv1760199,nssv1760207,nssv1760124,nssv1760182,nssv1760148,nssv1760173,nssv1760136,nssv1760169,nssv1760126,nssv1760208,nssv1760197,nssv1760142,nssv1760125,nssv1760191,nssv1760202,nssv1760189,nssv1760133,nssv1760184,nssv1760131,nssv1760180,nssv1760121,nssv1760164,nssv1760141,nssv1760192,nssv1760194,nssv1760162,nssv1760146,nssv1760165,nssv1760200,nssv1760140,nssv1760139,nssv1760159,nssv1760132,nssv1760212,nssv1760118,nssv1760176,nssv1760201,nssv1760161,nssv1760138,nssv1760174,nssv1760134,nssv1760156,nssv1760129,nssv1760151,nssv1760145,nssv1760152,nssv1760198,nssv1760213,nssv1760120,nssv1760117,nssv1760137,nssv1760154,nssv1760203,nssv1760205,nssv1760119,nssv1760144,nssv1760196,nssv1760150,nssv1760123,nssv1760178,nssv1760128,nssv1760155,nssv1760130,nssv1760163,nssv1760170,nssv1760171,nssv1760185,nssv1760188,nssv1760149,nssv1760166,nssv1760153,nssv1760168,nssv1760209,nssv1760157,nssv1760167,nssv1760158,nssv1760175,nssv1760147,nssv1760172,nssv1760160,nssv1760177,nssv1760193,nssv1760206,nssv1760211,nssv1760210,nssv1760190,nssv1760179,nssv1760181,nssv1760186 M 97 10 0 MTF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv472321 1 38126019 38126019 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011634 M 9 1 0 INPP5B NA18555 esv1640356 1 38135235 38135284 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3871016 M 2 0 1 INPP5B HuRef nsv1008462 1 38176625 38220924 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477463 M 29084 1 0 INPP5B,SF3A3 nsv945885 1 38195552 38196550 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760245,nssv1760290,nssv1760297,nssv1760263,nssv1760219,nssv1760308,nssv1760227,nssv1760255,nssv1760232,nssv1760278,nssv1760293,nssv1760285,nssv1760294,nssv1760214,nssv1760233,nssv1760264,nssv1760238,nssv1760274,nssv1760230,nssv1760276,nssv1760224,nssv1760282,nssv1760296,nssv1760257,nssv1760223,nssv1760280,nssv1760220,nssv1760301,nssv1760226,nssv1760256,nssv1760228,nssv1760244,nssv1760299,nssv1760304,nssv1760221,nssv1760279,nssv1760236,nssv1760259,nssv1760218,nssv1760270,nssv1760217,nssv1760283,nssv1760292,nssv1760239,nssv1760234,nssv1760240,nssv1760215,nssv1760305,nssv1760298,nssv1760289,nssv1760231,nssv1760273,nssv1760291,nssv1760262,nssv1760242,nssv1760237,nssv1760243,nssv1760302,nssv1760222,nssv1760247,nssv1760295,nssv1760258,nssv1760229,nssv1760303,nssv1760235,nssv1760261,nssv1760300,nssv1760248,nssv1760225,nssv1760277,nssv1760216,nssv1760286,nssv1760288,nssv1760284,nssv1760271,nssv1760281,nssv1760253,nssv1760250,nssv1760307,nssv1760252,nssv1760260,nssv1760287,nssv1760267,nssv1760309,nssv1760310,nssv1760254,nssv1760241,nssv1760251,nssv1760266,nssv1760275,nssv1760265,nssv1760246,nssv1760269,nssv1760268,nssv1760272,nssv1760249,nssv1760306 M 97 10 0 SF3A3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv822331 1 38201189 38202698 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430339 M 31 0 1 SF3A3 AK16 esv3417422 1 38220294 38220313 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593957 M 185 1 0 SF3A3 NA12815 nsv522 1 38265239 38299785 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2925 M 9 1 0 POU3F1 NA18555 nsv521856 1 38265491 38272230 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694630 M 2026 0 1 "" esv3302766 1 38356355 38356513 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7736661,essv7732953,essv7735590 M 185 3 0 "" NA18563,NA18577,NA18582 nsv546018 1 38368451 38376972 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712365 M 17421 0 1 "" dgv235n54 1 38374660 38377135 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546020,nsv546021,nsv546019 M 17421 0 5 "" esv26787 1 38375147 38377167 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21222 M 40 0 1 "" NA12828 dgv236n54 1 38375225 38377135 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546027,nsv546022,nsv546026,nsv546025,nsv546028,nsv546023,nsv546030,nsv546031,nsv546024,nsv546032 M 17421 0 35 "" nsv546029 1 38375384 38376453 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712403 M 17421 0 1 "" nsv546033 1 38376133 38377135 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712408,nssv712407 M 17421 0 2 "" nsv441687 1 38414624 38417452 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656627,nssv1656625,nssv1656628,nssv1656626,nssv1656622,nssv1656623,nssv1656624 M 270 0 7 "" NA18523,NA18852,NA18913,NA18914,NA19119,NA19120,NA19159 esv24918 1 38414777 38417685 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11024 M 40 0 1 "" NA18523 nsv519358 1 38443993 38445830 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694325 M 2026 0 1 "" nsv834757 1 38449737 38643479 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444651 M 95 1 0 LOC339442 nsv533 1 38461115 38475672 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9028 M 9 0 1 "" NA12156 nsv544 1 38478334 38484938 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5499 M 9 1 0 "" NA19129 nsv476926 1 38493787 38493787 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015241 M 9 1 0 "" NA12878 nsv834768 1 38534331 38725549 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444662 M 95 1 0 "" esv3440303 1 38556566 38556566 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740972 M 185 1 0 "" NA19240 nsv517641 1 38622926 38625611 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694835,nssv652648,nssv685154,nssv688984,nssv693048,nssv684558 M 2026 6 0 "" nsv521479 1 38694640 38701079 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694450 M 2026 1 0 "" nsv473614 1 38713922 38713922 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015462 M 9 1 0 "" NA19129 esv1309666 1 38723326 38723326 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3833922 M 2 1 0 "" HuRef nsv555 1 38755445 38790436 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4141 M 9 1 0 "" NA12878 dgv151n100 1 38784505 38814010 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007085,nsv997481 M 29084 3 0 "" nsv546034 1 38827144 38857823 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712409 M 17421 1 0 "" nsv546035 1 38853018 38858133 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712410 M 17421 0 1 "" dgv237n54 1 38854416 38860191 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546036,nsv546040 M 17421 0 3 "" nsv511145 1 38854416 38860191 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625711 M 1 0 1 "" 1 nsv546037 1 38854416 38863164 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712412 M 17421 0 1 "" dgv238n54 1 38854820 38858133 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546038,nsv546039 M 17421 0 9 "" nsv508008 1 38855197 38861197 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618492 M 4 0 0 "" CHM nsv511690 1 38856518 38858543 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626329 M 1 0 1 "" 1 dgv33n67 1 38856775 38858166 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822342,nsv822365 M 31 0 5 "" AK18,AK6,NA18526,NA18582,NA18947 nsv822353 1 38856775 38859071 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431803 M 31 0 1 "" AK20 nsv820218 1 38856803 38859937 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419512 M 2 0 1 "" AK1 esv27536 1 38856971 38858162 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15624 M 40 0 2 "" NA06985,NA18858 dgv239n54 1 38856998 38857823 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546042,nsv546043,nsv546041 M 17421 0 4 "" dgv240n54 1 38856998 38858133 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546050,nsv546046,nsv546045,nsv546051,nsv546044,nsv546047 M 17421 0 98 "" nsv546048 1 38856998 38860191 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712523,nssv712522,nssv712521,nssv712524,nssv712525 M 17421 0 5 "" dgv241n54 1 38856998 38863164 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546060,nsv546052,nsv546055,nsv546049 M 17421 0 8 "" dgv242n54 1 38857337 38858133 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546057,nsv546053,nsv546058,nsv546059,nsv546056,nsv546054 M 17421 0 27 "" nsv10117 1 38900923 38910933 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv18773 M 31 0 1 "" NA18972 dgv34n67 1 38901080 38909934 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822387,nsv822376 M 31 0 2 "" NA18968,NA18972 esv2758932 1 38901188 38910242 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756842 M 270 0 3 "" NA18968,NA18972,NA18987 nsv441688 1 38901191 38908792 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656631,nssv1656630,nssv1656629 M 270 0 3 "" NA18968,NA18972,NA18987 nsv514925 1 38901296 38908796 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2860612,nssv2865566,nssv2866276,nssv2866325,nssv2865866,nssv2867100,nssv2859166,nssv2861283,nssv2861742,nssv2859912,nssv2860073,nssv2859768,nssv2862725,nssv2867891,nssv2866948,nssv2858946,nssv2863152,nssv2867804,nssv2858623,nssv2864178,nssv2868207,nssv2867835,nssv2861295,nssv2858828,nssv2859795,nssv2858954,nssv2868485,nssv2863193,nssv2865211,nssv2859026,nssv2860079,nssv2858890,nssv2861286,nssv2861908,nssv2860728,nssv2868175,nssv2867587,nssv2868441,nssv2859431,nssv2867525,nssv2860720,nssv2859383,nssv2861886,nssv2866420,nssv2859564,nssv2866832,nssv2862621,nssv2861955,nssv2860940,nssv2858817,nssv2861667,nssv2865473,nssv2865050,nssv2867758,nssv2866563,nssv2867348,nssv2865519,nssv2861916,nssv2860152,nssv2867042,nssv2862787,nssv2862518,nssv2860298,nssv2868143,nssv2861199,nssv2865540,nssv2858670,nssv2862892,nssv2861760,nssv2859318,nssv2867427,nssv2858550,nssv2864741,nssv2860895,nssv2867518,nssv2865415,nssv2860614,nssv2860765,nssv2858914,nssv2858990,nssv2859900,nssv2863162,nssv2866241,nssv2862283,nssv2859207,nssv2861704,nssv2858593,nssv2858562,nssv2858612,nssv2862496,nssv2868457,nssv2859834,nssv2860511,nssv2863189,nssv2862701,nssv2864842,nssv2866969,nssv2867753,nssv2864742,nssv2863009,nssv2862511,nssv2866537,nssv2868073,nssv2868255,nssv2864516,nssv2859152,nssv2859622,nssv2860879,nssv2865734,nssv2865610,nssv2860290,nssv2862920,nssv2860486,nssv2864858,nssv2859726,nssv2862384,nssv2858568,nssv2864704,nssv2859727,nssv2863766,nssv2865920,nssv2859123,nssv2862116,nssv2858916,nssv2860332,nssv2867248,nssv2865761,nssv2866095,nssv2868320,nssv2859362,nssv2861591,nssv2862566,nssv2865954,nssv2861555,nssv2867648,nssv2865970,nssv2864387,nssv2866233,nssv2866414,nssv2863659,nssv2863026,nssv2865374,nssv2861129,nssv2865159,nssv2861432,nssv2866423,nssv2868138,nssv2865642,nssv2859612,nssv2862148,nssv2860749,nssv2867363,nssv2859238,nssv2867864,nssv2858549,nssv2863087,nssv2860849,nssv2866992,nssv2861951,nssv2860785,nssv2868150,nssv2862342,nssv2862706,nssv2861726,nssv2862577,nssv2865033,nssv2862001,nssv2860611,nssv2862707,nssv2860664,nssv2863053,nssv2859563,nssv2867860,nssv2863748,nssv2860094,nssv2866089,nssv2865257,nssv2862571,nssv2868068,nssv2865822,nssv2858722,nssv2868244,nssv2861052,nssv2868314,nssv2859367,nssv2863409,nssv2864228,nssv2859255,nssv2865227,nssv2864011,nssv2864144,nssv2867888,nssv2867222,nssv2859284,nssv2864558,nssv2868435,nssv2866847,nssv2859957,nssv2864475,nssv2866753,nssv2863786,nssv2862533,nssv2862874,nssv2863336,nssv2864635,nssv2862275,nssv2863787,nssv2862863,nssv2863717,nssv2861350,nssv2867256,nssv2863282,nssv2858970,nssv2866906,nssv2867157,nssv2864253,nssv2865668,nssv2863992,nssv2866574,nssv2864790,nssv2863269,nssv2859488,nssv2860941,nssv2865018,nssv2862214,nssv2867238,nssv2862409,nssv2858902,nssv2866884,nssv2861288,nssv2867463,nssv2861093,nssv2861068,nssv2866535,nssv2859242,nssv2859107,nssv2859802,nssv2864926,nssv2865193,nssv2865503,nssv2866296,nssv2860241,nssv2864740,nssv2858697,nssv2862768,nssv2860969,nssv2859655,nssv2862046,nssv2861616,nssv2860346,nssv2862746,nssv2865578,nssv2862273,nssv2858816,nssv2862842,nssv2865316,nssv2863685,nssv2865819,nssv2865977,nssv2863451,nssv2862333,nssv2866133,nssv2866405,nssv2863376,nssv2867554,nssv2865646,nssv2861168,nssv2868430,nssv2866212,nssv2864529,nssv2863320,nssv2866609,nssv2864998,nssv2860787,nssv2858716,nssv2862635,nssv2867496,nssv2863884,nssv2866775,nssv2859084,nssv2864336,nssv2862090,nssv2866299,nssv2859624,nssv2859632,nssv2866501,nssv2863098,nssv2866051,nssv2860988,nssv2858585,nssv2866197,nssv2861266,nssv2858682,nssv2865851,nssv2868366,nssv2864506,nssv2866622,nssv2867992,nssv2864364,nssv2865951,nssv2867833,nssv2862534,nssv2859231,nssv2861142,nssv2861166,nssv2863863,nssv2867719,nssv2863048,nssv2866744,nssv2861165,nssv2858696,nssv2861390,nssv2868450,nssv2864824,nssv2866886,nssv2863750,nssv2866897,nssv2867426,nssv2867232,nssv2860950,nssv2865936,nssv2862325,nssv2860188,nssv2864281,nssv2867636,nssv2860296,nssv2867231,nssv2867327,nssv2865478,nssv2867207,nssv2865944,nssv2859192,nssv2863484,nssv2859075,nssv2862000,nssv2868282,nssv2859174,nssv2861628,nssv2866375,nssv2866748,nssv2858599,nssv2861523,nssv2859841,nssv2859225,nssv2868340,nssv2865330,nssv2862239,nssv2864396,nssv2867847,nssv2864735,nssv2859583,nssv2858858,nssv2861913,nssv2864086,nssv2858864,nssv2866111,nssv2867848,nssv2861062,nssv2864646,nssv2863973,nssv2867979,nssv2862775,nssv2860778,nssv2863707,nssv2865194,nssv2862905,nssv2858767,nssv2865479,nssv2863744,nssv2862942,nssv2864019,nssv2865933,nssv2858984,nssv2862442,nssv2858573,nssv2859887,nssv2865598,nssv2866222,nssv2868402,nssv2867186,nssv2863567,nssv2864261,nssv2867823,nssv2866280,nssv2866085,nssv2867765,nssv2862686,nssv2863097,nssv2860470,nssv2860844,nssv2860103,nssv2859787,nssv2866854,nssv2864757,nssv2866317,nssv2867519,nssv2859162,nssv2864572,nssv2861683,nssv2861127,nssv2859061,nssv2864632,nssv2863424,nssv2860175,nssv2868469,nssv2858798,nssv2864977,nssv2860402,nssv2867351,nssv2863742,nssv2863648,nssv2865608,nssv2864046,nssv2866891,nssv2862358,nssv2866476,nssv2866802,nssv2864443,nssv2862136,nssv2859803,nssv2860976,nssv2861213,nssv2858503,nssv2865154,nssv2858584,nssv2866433,nssv2859574,nssv2866268,nssv2865526,nssv2858574,nssv2860219,nssv2865814,nssv2867086,nssv2867863,nssv2867002,nssv2865204,nssv2862021,nssv2862113,nssv2867680,nssv2867700,nssv2867199,nssv2861249,nssv2862866,nssv2868252,nssv2860798,nssv2859018,nssv2865402,nssv2863747,nssv2860093,nssv2861448,nssv2864687,nssv2862562,nssv2859389,nssv2862151,nssv2863453,nssv2860758,nssv2861270,nssv2861259,nssv2860622,nssv2862320,nssv2867932,nssv2862250,nssv2860998,nssv2861889,nssv2859514,nssv2861525,nssv2865430,nssv2860076,nssv2862916,nssv2865278,nssv2861842,nssv2866368,nssv2861798,nssv2860562,nssv2859847,nssv2867568,nssv2858771,nssv2863649,nssv2866244,nssv2862112,nssv2864485,nssv2860524,nssv2867092,nssv2862823,nssv2862959,nssv2859031,nssv2868043,nssv2865460 M 2366 488 0 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv818145 1 38907229 38909659 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417575 M 112 0 1 "" NA18972 nsv461095 1 38907467 38944875 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537543 M 1557 0 1 "" HGDP00157 nsv546061 1 38907467 38944875 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173815 M 17421 0 1 "" HGDP00157 nsv945886 1 38947811 38950644 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760388,nssv1760380,nssv1760389,nssv1760354,nssv1760316,nssv1760365,nssv1760324,nssv1760379,nssv1760320,nssv1760351,nssv1760395,nssv1760376,nssv1760397,nssv1760369,nssv1760317,nssv1760348,nssv1760329,nssv1760362,nssv1760330,nssv1760371,nssv1760340,nssv1760367,nssv1760342,nssv1760344,nssv1760391,nssv1760360,nssv1760327,nssv1760400,nssv1760321,nssv1760346,nssv1760323,nssv1760405,nssv1760314,nssv1760403,nssv1760322,nssv1760387,nssv1760390,nssv1760361,nssv1760333,nssv1760372,nssv1760331,nssv1760373,nssv1760394,nssv1760384,nssv1760325,nssv1760382,nssv1760315,nssv1760311,nssv1760332,nssv1760377,nssv1760312,nssv1760356,nssv1760393,nssv1760363,nssv1760318,nssv1760347,nssv1760335,nssv1760375,nssv1760396,nssv1760352,nssv1760328,nssv1760341,nssv1760339,nssv1760336,nssv1760319,nssv1760350,nssv1760392,nssv1760401,nssv1760313,nssv1760355,nssv1760326,nssv1760398,nssv1760337,nssv1760370,nssv1760386,nssv1760402,nssv1760364,nssv1760374,nssv1760385,nssv1760334,nssv1760359,nssv1760366,nssv1760343,nssv1760383,nssv1760358,nssv1760378,nssv1760381,nssv1760407,nssv1760404,nssv1760345,nssv1760349,nssv1760368,nssv1760338,nssv1760353,nssv1760357,nssv1760399,nssv1760406 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv526972 1 39021300 39023551 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703344 M 2026 1 0 "" esv23679 1 39067668 39068178 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13960 M 40 0 1 "" NA18861 nsv435884 1 39150888 39157686 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465940 M 2 0 1 RHBDL2 NA15510 nsv518731 1 39168470 39169011 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696181 M 2026 0 1 RHBDL2 esv1002936 1 39183001 39184768 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564723 M 3 1 0 "" HuRef nsv512737 1 39184060 39184303 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625363 M 1 1 0 "" 1 esv1242325 1 39184116 39184116 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4051569 M 2 1 0 "" HuRef esv2764196 1 39184689 39203724 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005371,essv7005368,essv7005369,essv7005372,essv7005370 M 1109 5 0 "" RW_0004,RW_0023,RW_0116,RW_0594,RW_0602 esv23536 1 39205732 39213224 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20704 M 40 0 1 "" NA18502 nsv478091 1 39237792 39237792 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018420 M 9 1 0 AKIRIN1 NA18517 nsv945887 1 39242372 39244153 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761645,nssv1761683,nssv1761717,nssv1761680,nssv1761722,nssv1761734,nssv1761721,nssv1761673,nssv1761657,nssv1761701,nssv1761646,nssv1761704,nssv1761649,nssv1761692,nssv1761648,nssv1761666,nssv1761654,nssv1761691,nssv1761661,nssv1761716,nssv1761669,nssv1761727,nssv1761718,nssv1761729,nssv1761659,nssv1761694,nssv1761651,nssv1761685,nssv1761668,nssv1761732,nssv1761671,nssv1761711,nssv1761656,nssv1761713,nssv1761658,nssv1761705,nssv1761664,nssv1761684,nssv1761655,nssv1761672,nssv1761660,nssv1761667,nssv1760410,nssv1761670,nssv1761652,nssv1761707,nssv1761653,nssv1761731,nssv1761726,nssv1761715,nssv1761662,nssv1761730,nssv1760409,nssv1761682,nssv1761725,nssv1761679,nssv1761724,nssv1761681,nssv1761647,nssv1761700,nssv1761650,nssv1761675,nssv1761719,nssv1761703,nssv1760411,nssv1761699,nssv1761723,nssv1761688,nssv1761720,nssv1761735,nssv1761644,nssv1761665,nssv1761714,nssv1761686,nssv1760408,nssv1761695,nssv1761693,nssv1761702,nssv1761712,nssv1761698,nssv1761677,nssv1761674,nssv1761687,nssv1761710,nssv1761690,nssv1761689,nssv1761676,nssv1761728,nssv1761708,nssv1761736,nssv1761678,nssv1761696,nssv1761697,nssv1761709,nssv1761733,nssv1761663,nssv1761706 M 97 10 0 AKIRIN1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945888 1 39251760 39253952 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761740,nssv1758183,nssv1758161,nssv1758236,nssv1758160,nssv1758182,nssv1758158,nssv1758195,nssv1758226,nssv1758210,nssv1761742,nssv1758177,nssv1758169,nssv1758188,nssv1758218,nssv1758198,nssv1761739,nssv1758214,nssv1758165,nssv1758205,nssv1761747,nssv1758228,nssv1761746,nssv1758174,nssv1761751,nssv1758173,nssv1758163,nssv1761737,nssv1758172,nssv1758231,nssv1761753,nssv1758171,nssv1761745,nssv1758189,nssv1761743,nssv1758211,nssv1758225,nssv1758187,nssv1761750,nssv1758167,nssv1758224,nssv1758212,nssv1761752,nssv1758184,nssv1758159,nssv1758202,nssv1758227,nssv1758199,nssv1758223,nssv1758204,nssv1761738,nssv1758203,nssv1761744,nssv1758234,nssv1761748,nssv1758208,nssv1758219,nssv1758186,nssv1758162,nssv1758206,nssv1758220,nssv1758190,nssv1758170,nssv1758164,nssv1761741,nssv1758193,nssv1761749,nssv1758194,nssv1758222,nssv1758179,nssv1758221,nssv1758180,nssv1758207,nssv1758237,nssv1758235,nssv1758213,nssv1758192,nssv1758197,nssv1758217,nssv1758168,nssv1758185,nssv1758176,nssv1758200,nssv1758232,nssv1758181,nssv1758175,nssv1758178,nssv1758191,nssv1758216,nssv1758229,nssv1758230,nssv1758201,nssv1758215,nssv1758209,nssv1758233,nssv1758196,nssv1758166 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1254825 1 39282829 39282829 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3621833 M 2 1 0 "" HuRef esv22317 1 39306877 39309244 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17982 M 40 1 0 "" NA18858 nsv515793 1 39343798 39351119 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv657487,nssv694005,nssv692912,nssv664813,nssv678265,nssv693049 M 2026 0 6 MACF1 esv32941 1 39376424 39377309 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv99758 M 51 0 1 MACF1 22086 esv3451162 1 39500576 39500595 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593979 M 185 1 0 MACF1 NA12812 nsv945890 1 39541397 39547790 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759567,nssv1759574,nssv1759492,nssv1759556,nssv1759516,nssv1759562,nssv1759570,nssv1759579,nssv1759573,nssv1759523,nssv1759505,nssv1759536,nssv1759506,nssv1759510,nssv1759511,nssv1759538,nssv1759501,nssv1759522,nssv1759503,nssv1759551,nssv1759502,nssv1759553,nssv1759491,nssv1759532,nssv1759497,nssv1759548,nssv1759572,nssv1759528,nssv1759509,nssv1759576,nssv1759507,nssv1759563,nssv1759568,nssv1759531,nssv1759488,nssv1759583,nssv1759493,nssv1759577,nssv1759518,nssv1759537,nssv1759571,nssv1759549,nssv1759498,nssv1759581,nssv1759515,nssv1759542,nssv1759494,nssv1759524,nssv1759504,nssv1759513,nssv1759495,nssv1759547,nssv1759499,nssv1759517,nssv1759500,nssv1759543,nssv1759566,nssv1759530,nssv1759496,nssv1759534,nssv1759490,nssv1759560,nssv1759565,nssv1759558,nssv1759569,nssv1759559,nssv1759564,nssv1759519,nssv1759508,nssv1759514,nssv1759489,nssv1758255,nssv1759535,nssv1759521,nssv1759544,nssv1759529,nssv1759546,nssv1759552,nssv1759550,nssv1759578,nssv1759582,nssv1759520,nssv1759512,nssv1759540,nssv1759525,nssv1759561,nssv1759527,nssv1759557,nssv1759554,nssv1759526,nssv1759539,nssv1759575,nssv1759533,nssv1759545,nssv1759580,nssv1759541,nssv1759555 M 97 10 0 MACF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv820058 1 39561057 39562375 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419235 M 2 0 1 MACF1 AK1 nsv506928 1 39584479 39590479 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620653 M 4 0 0 MACF1 NA15510 esv1294628 1 39715394 39715394 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3974442 M 2 1 0 MACF1 HuRef nsv7177 1 39718341 40039877 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5516,nssv10825,nssv6576 M 9 0 0 BMP8A,BMP8B,HEYL,HPCAL4,MACF1,NT5C1A,OXCT2,PABPC4,PPIE,PPIEL,SNORA55 NA12156,NA18956,NA19129 esv2268423 1 39734322 39734678 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4733529 M 1 0 1 BMP8A NA18507 nsv508160 1 39741317 39803133 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617344 M 4 0 1 BMP8A,PABPC4,PPIEL CHM esv1368683 1 39743043 39743043 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3701537 M 2 1 0 BMP8A HuRef nsv829649 1 39743542 39877101 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444673,nssv1444684 M 95 0 2 BMP8A,HEYL,PABPC4,PPIEL,SNORA55 nsv945891 1 39754960 39757926 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759591,nssv1759630,nssv1759586,nssv1759602,nssv1759590,nssv1759617,nssv1759593,nssv1759616,nssv1759614,nssv1759620,nssv1759608,nssv1759626,nssv1759589,nssv1759597,nssv1759628,nssv1759623,nssv1759611,nssv1759594,nssv1759631,nssv1759606,nssv1759613,nssv1759603,nssv1759612,nssv1759622,nssv1759624,nssv1759618,nssv1759619,nssv1759601,nssv1759596,nssv1759585,nssv1759607,nssv1759592,nssv1759598,nssv1759588,nssv1759605,nssv1759595,nssv1759621,nssv1759615,nssv1759625,nssv1759599,nssv1759610,nssv1759587,nssv1759604,nssv1759627,nssv1759584,nssv1759600,nssv1759629,nssv1759609 M 97 10 0 BMP8A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv29294 1 39771283 39773791 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13358 M 40 0 1 PPIEL NA18517 nsv566 1 39829045 39862326 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9038 M 9 1 0 HEYL NA12156 nsv160826 1 39845318 39845673 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179404 M 24 "" esv3367103 1 39867352 39869250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692322 M 185 1 0 HEYL NA19239 nsv518544 1 39878682 39885197 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695987 M 2026 0 1 "" nsv577 1 39882608 39915099 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2085 M 9 1 0 NT5C1A NA18555 esv2530832 1 39902283 39903196 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5307330 M 1 1 0 NT5C1A NA18507 nsv546062 1 39917884 39989580 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712566 M 17421 1 0 HPCAL4,PPIE dgv152n100 1 39931415 40038677 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998684,nsv1008565 M 29084 2 0 BMP8B,OXCT2,PPIE dgv153n100 1 39954078 40086507 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999978,nsv997280,nsv1007943,nsv1003494,nsv1009306 M 29084 6 0 BMP8B,OXCT2,PPIE,TRIT1 nsv945893 1 39956427 39958552 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759641,nssv1759722,nssv1759639,nssv1759685,nssv1759661,nssv1759723,nssv1759637,nssv1759683,nssv1759712,nssv1759708,nssv1759635,nssv1759720,nssv1759711,nssv1759697,nssv1759650,nssv1759670,nssv1759651,nssv1759726,nssv1759648,nssv1759684,nssv1759646,nssv1759727,nssv1759634,nssv1759671,nssv1759718,nssv1759679,nssv1759653,nssv1759686,nssv1759709,nssv1759668,nssv1759636,nssv1759690,nssv1759717,nssv1759706,nssv1759647,nssv1759702,nssv1759654,nssv1759700,nssv1759656,nssv1759678,nssv1759710,nssv1759672,nssv1759652,nssv1759681,nssv1759645,nssv1759698,nssv1759642,nssv1759659,nssv1759633,nssv1759693,nssv1759716,nssv1759667,nssv1759713,nssv1759664,nssv1759660,nssv1759676,nssv1759715,nssv1759688,nssv1759638,nssv1759725,nssv1759649,nssv1759632,nssv1759644,nssv1759673,nssv1759643,nssv1759692,nssv1759640,nssv1759682,nssv1759714,nssv1759728,nssv1759663,nssv1759655,nssv1759724,nssv1759658,nssv1759696,nssv1759721,nssv1759701,nssv1759675,nssv1759699,nssv1759662,nssv1759669,nssv1759665,nssv1759704,nssv1759666,nssv1759687,nssv1759719,nssv1759703,nssv1759691,nssv1759694,nssv1759705,nssv1759689,nssv1759680,nssv1759707,nssv1759657,nssv1759677,nssv1759695,nssv1759674 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv15n27 1 39957320 40079485 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv461106,nsv461117 M 1557 2 0 BMP8B,OXCT2,PPIE,TRIT1 1780854592_A,1780862460_A nsv546063 1 39957320 40079485 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173816,nssv712567,nssv1173817 M 17421 3 0 BMP8B,OXCT2,PPIE,TRIT1 1780854592_A,1780862460_A esv2758933 1 39997730 40433019 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757730 M 270 0 1 BMP8B,CAP1,MFSD2A,MYCL,OXCT2,PPIE,PPT1,RLF,TRIT1 NA19152 nsv945894 1 40001731 40004424 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759747,nssv1759763,nssv1759734,nssv1760721,nssv1760739,nssv1759761,nssv1760735,nssv1759765,nssv1760731,nssv1759786,nssv1759753,nssv1760745,nssv1759745,nssv1759793,nssv1759748,nssv1759792,nssv1759732,nssv1760726,nssv1759760,nssv1759767,nssv1759731,nssv1760742,nssv1759742,nssv1760747,nssv1759736,nssv1759754,nssv1760736,nssv1759762,nssv1759743,nssv1759773,nssv1759733,nssv1759766,nssv1760733,nssv1759785,nssv1759751,nssv1759794,nssv1759744,nssv1759787,nssv1759737,nssv1759782,nssv1759758,nssv1760724,nssv1760738,nssv1760729,nssv1759730,nssv1760740,nssv1759757,nssv1759777,nssv1760737,nssv1759771,nssv1759739,nssv1759776,nssv1759746,nssv1759775,nssv1759735,nssv1760720,nssv1759750,nssv1759774,nssv1759749,nssv1759768,nssv1759738,nssv1760728,nssv1760730,nssv1760744,nssv1759741,nssv1760743,nssv1760732,nssv1759783,nssv1759740,nssv1759772,nssv1760734,nssv1759729,nssv1760749,nssv1759795,nssv1760746,nssv1760725,nssv1759759,nssv1760727,nssv1759790,nssv1759781,nssv1759764,nssv1760748,nssv1759756,nssv1760723,nssv1759769,nssv1759788,nssv1759789,nssv1759778,nssv1760741,nssv1759780,nssv1759755,nssv1760722,nssv1759770,nssv1759752,nssv1759784,nssv1759779,nssv1759791 M 97 10 0 BMP8B,PPIE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945895 1 40006019 40014295 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760757,nssv1760786,nssv1760756,nssv1760771,nssv1760752,nssv1760787,nssv1760759,nssv1760789,nssv1760753,nssv1760796,nssv1760777,nssv1760782,nssv1760764,nssv1760767,nssv1760774,nssv1760765,nssv1760766,nssv1760760,nssv1760781,nssv1760758,nssv1760788,nssv1760791,nssv1760790,nssv1760792,nssv1760795,nssv1760778,nssv1760769,nssv1760785,nssv1760751,nssv1760762,nssv1760784,nssv1760783,nssv1760776,nssv1760761,nssv1760772,nssv1760768,nssv1760773,nssv1760780,nssv1760797,nssv1760794,nssv1760775,nssv1760754,nssv1760793,nssv1760770,nssv1760750,nssv1760763,nssv1760755,nssv1760779 M 97 10 0 BMP8B,OXCT2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv6866 1 40042024 40042203 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29307 M 1 0 0 "" nsv472423 1 40134899 40134899 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019203 M 9 1 0 MYCL NA18555 nsv159700 1 40161162 40168129 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178278 M 24 "" nsv472702 1 40166350 40166350 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010970 M 9 1 0 "" NA18555 nsv945896 1 40199096 40203923 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760807,nssv1759462,nssv1760804,nssv1759459,nssv1760819,nssv1759430,nssv1760803,nssv1759427,nssv1760818,nssv1759443,nssv1760815,nssv1759417,nssv1759447,nssv1759426,nssv1760809,nssv1759420,nssv1760800,nssv1759405,nssv1760816,nssv1759436,nssv1759456,nssv1759457,nssv1759449,nssv1759441,nssv1760817,nssv1759413,nssv1759453,nssv1759442,nssv1759450,nssv1759411,nssv1760811,nssv1760832,nssv1760801,nssv1759407,nssv1760814,nssv1759440,nssv1760813,nssv1759422,nssv1759454,nssv1759435,nssv1759451,nssv1759461,nssv1760805,nssv1759466,nssv1760810,nssv1759465,nssv1760820,nssv1759433,nssv1760806,nssv1759418,nssv1760808,nssv1759410,nssv1760802,nssv1759408,nssv1760799,nssv1759464,nssv1759448,nssv1760825,nssv1760827,nssv1759439,nssv1760826,nssv1759423,nssv1760829,nssv1759429,nssv1760822,nssv1759434,nssv1760812,nssv1760823,nssv1759452,nssv1760828,nssv1759455,nssv1759444,nssv1759458,nssv1759432,nssv1759424,nssv1759409,nssv1759412,nssv1759437,nssv1760830,nssv1759446,nssv1759416,nssv1759445,nssv1759438,nssv1759425,nssv1759415,nssv1759431,nssv1759428,nssv1760824,nssv1759406,nssv1760821,nssv1760798,nssv1759460,nssv1759463,nssv1759421,nssv1759414,nssv1759419,nssv1760831 M 97 10 0 MFSD2A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv523913 1 40249388 40271889 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699756 M 2026 0 1 "" esv2750836 1 40276366 40331835 CNV gain Pinto_et_al_2007 17911159 SNP array essv6988472,essv6981953 M 771 2 0 CAP1,PPT1 BEC_508 nsv517028 1 40288983 40307654 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv663352,nssv653640,nssv651735,nssv671364 M 2026 4 0 CAP1 esv3332178 1 40297264 40297283 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594002,essv9593990 M 185 2 0 CAP1 NA18970,NA19141 nsv588 1 40304630 40310137 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10831 M 9 1 0 CAP1 NA18956 nsv945897 1 40309669 40310857 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1759472,nssv1760485,nssv1760477,nssv1760433,nssv1760412,nssv1760428,nssv1759477,nssv1760426,nssv1759485,nssv1760484,nssv1759486,nssv1760479,nssv1759476,nssv1760486,nssv1759479,nssv1760438,nssv1759481,nssv1760463,nssv1759478,nssv1760483,nssv1760476,nssv1760446,nssv1759471,nssv1760430,nssv1760473,nssv1760449,nssv1759483,nssv1760423,nssv1760471,nssv1760461,nssv1759487,nssv1760445,nssv1759469,nssv1760437,nssv1760413,nssv1760459,nssv1760422,nssv1760448,nssv1759482,nssv1760442,nssv1759468,nssv1760460,nssv1760469,nssv1760429,nssv1760415,nssv1760424,nssv1759484,nssv1760440,nssv1760475,nssv1760462,nssv1760470,nssv1760451,nssv1759480,nssv1760457,nssv1759470,nssv1760480,nssv1760420,nssv1760467,nssv1759474,nssv1760427,nssv1760419,nssv1760418,nssv1760474,nssv1760441,nssv1760472,nssv1760425,nssv1760468,nssv1760466,nssv1759475,nssv1760417,nssv1759473,nssv1760453,nssv1760444,nssv1760464,nssv1760454,nssv1760421,nssv1759467,nssv1760455,nssv1760456,nssv1760443,nssv1760452,nssv1760450,nssv1760447,nssv1760432,nssv1760414,nssv1760465,nssv1760478,nssv1760431,nssv1760435,nssv1760482,nssv1760481,nssv1760458,nssv1760434,nssv1760439,nssv1760416,nssv1760436,nssv1760487 M 97 10 0 CAP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv829660 1 40311291 40504667 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1444985,nssv1444896,nssv1444695,nssv1444784,nssv1444839,nssv1445085,nssv1444929,nssv1445018,nssv1445029,nssv1445074,nssv1444940,nssv1445107,nssv1444706,nssv1444773,nssv1444996,nssv1445040,nssv1445096,nssv1444974,nssv1444751,nssv1444728,nssv1444817,nssv1444963,nssv1444885,nssv1445118,nssv1445129,nssv1444907,nssv1444852,nssv1444874,nssv1445007,nssv1444951,nssv1444762,nssv1444806,nssv1444717,nssv1444918,nssv1444828,nssv1444795,nssv1444863,nssv1445051,nssv1444740,nssv1445062 M 95 3 37 PPT1,RLF,TMCO2,ZMPSTE24 nsv476221 1 40316280 40316280 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015342 M 9 1 0 PPT1 NA12878 nsv10128 1 40320597 40326326 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv14094 M 31 0 1 PPT1 NA18975 esv6823 1 40324735 40326380 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29264 M 1 0 0 PPT1 dgv35n67 1 40324844 40326145 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822398,nsv822409 M 31 0 2 PPT1 AK20,NA18949 nsv945898 1 40365790 40370714 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760509,nssv1760562,nssv1760570,nssv1760578,nssv1760493,nssv1760523,nssv1760566,nssv1760563,nssv1760571,nssv1760522,nssv1760505,nssv1760525,nssv1760565,nssv1760555,nssv1760508,nssv1760584,nssv1760519,nssv1760531,nssv1760490,nssv1760514,nssv1760506,nssv1760532,nssv1760501,nssv1760536,nssv1760499,nssv1760545,nssv1760507,nssv1760530,nssv1760503,nssv1760549,nssv1760494,nssv1760583,nssv1760497,nssv1760513,nssv1760568,nssv1760526,nssv1760504,nssv1760546,nssv1760512,nssv1760543,nssv1760498,nssv1760576,nssv1760517,nssv1760551,nssv1760496,nssv1760560,nssv1760573,nssv1760520,nssv1760510,nssv1760527,nssv1760495,nssv1760535,nssv1760492,nssv1760524,nssv1760489,nssv1760515,nssv1760572,nssv1760537,nssv1760502,nssv1760554,nssv1760574,nssv1760579,nssv1760500,nssv1760539,nssv1760567,nssv1760557,nssv1760491,nssv1760542,nssv1760516,nssv1760534,nssv1760569,nssv1760558,nssv1760556,nssv1760580,nssv1760548,nssv1760564,nssv1760575,nssv1760538,nssv1760541,nssv1760540,nssv1760553,nssv1760577,nssv1760521,nssv1760559,nssv1760561,nssv1760529,nssv1760550,nssv1760547,nssv1760582,nssv1760544,nssv1760511,nssv1760581,nssv1760552,nssv1760528,nssv1760533,nssv1760518,nssv1760488 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv521874 1 40408974 40460766 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694106 M 2026 0 1 RLF nsv947427 1 40427478 40431830 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2763173 M 97 1 0 RLF HGDP00998 nsv945899 1 40561911 40574284 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760593,nssv1760647,nssv1760606,nssv1760610,nssv1760602,nssv1760618,nssv1760663,nssv1760645,nssv1760600,nssv1760635,nssv1760614,nssv1760679,nssv1760668,nssv1760608,nssv1760603,nssv1760637,nssv1760592,nssv1760626,nssv1760604,nssv1760672,nssv1760598,nssv1760649,nssv1760605,nssv1760585,nssv1760616,nssv1760652,nssv1760601,nssv1760660,nssv1760670,nssv1760661,nssv1760597,nssv1760643,nssv1760665,nssv1760633,nssv1760595,nssv1760659,nssv1760587,nssv1760681,nssv1760662,nssv1760676,nssv1760588,nssv1760629,nssv1760607,nssv1760621,nssv1760591,nssv1760675,nssv1760671,nssv1760619,nssv1760589,nssv1760630,nssv1760667,nssv1760625,nssv1760586,nssv1760620,nssv1760669,nssv1760642,nssv1760599,nssv1760627,nssv1760596,nssv1760611,nssv1760609,nssv1760657,nssv1760664,nssv1760628,nssv1760613,nssv1760638,nssv1760594,nssv1760615,nssv1760590,nssv1760640,nssv1760666,nssv1760639,nssv1760623,nssv1760612,nssv1760658,nssv1760680,nssv1760646,nssv1760641,nssv1760673,nssv1760624,nssv1760655,nssv1760632,nssv1760651,nssv1760631,nssv1760653,nssv1760677,nssv1760622,nssv1760636,nssv1760654,nssv1760678,nssv1760650,nssv1760644,nssv1760648,nssv1760634,nssv1760617,nssv1760656,nssv1760674 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546064 1 40670079 40911928 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712568 M 17421 1 0 EXO5,RIMS3,ZFP69,ZFP69B,ZNF684 esv2763289 1 40688990 40696606 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027668 M 1109 0 1 ZFP69B SW_1289 esv2597296 1 40733925 40735550 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5267691 M 1 0 1 ZFP69 NA18507 esv2369794 1 40734768 40735542 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4601534 M 1 0 1 "" NA18507 esv2421929 1 40738766 40742251 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5028496,essv5016105,essv5088596,essv5015979,essv5084132,essv5149168,essv5130096,essv5050516,essv5130881,essv5005042,essv5031015,essv5115483,essv5035402,essv5155345,essv5073486,essv5040849,essv5047287,essv5138442,essv5110742,essv5074050,essv5056700,essv5118372,essv5003237,essv5004950,essv5048361,essv5076708,essv5064594,essv5054910,essv5067036,essv5060670,essv5015953,essv5008358,essv5072071,essv5004810,essv5010372,essv5086730,essv5046483,essv5096270,essv5024336,essv5112394,essv5005003,essv5062156,essv5030533,essv5071766,essv5047717,essv5008181,essv5150596,essv5043565,essv5134179,essv5039917,essv5152520,essv5154716,essv5021004,essv5071966,essv5107694,essv5032064,essv5018422,essv5016174,essv5090401,essv5095069,essv5101369,essv5075627,essv5058625,essv5145500,essv5016558,essv5123078,essv5102518 M 1184 0 67 "" NA17976,NA17989,NA17990,NA17995,NA18112,NA18124,NA18125,NA18132,NA18141,NA18144,NA18146,NA18150,NA18152,NA18153,NA18497,NA18498,NA18537,NA18546,NA18552,NA18566,NA18593,NA18599,NA18602,NA18620,NA18641,NA18643,NA18682,NA18749,NA18945,NA18951,NA18953,NA18956,NA18973,NA18976,NA18991,NA19009,NA19028,NA19036,NA19044,NA19064,NA19075,NA19087,NA19088,NA19184,NA19190,NA19316,NA19334,NA19429,NA19467,NA19712,NA19982,NA20295,NA21300,NA21311,NA21314,NA21320,NA21359,NA21381,NA21421,NA21423,NA21425,NA21454,NA21479,NA21485,NA21608,NA21613,NA21617 nsv441689 1 40738766 40742251 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656639,nssv1656638,nssv1656633,nssv1656636,nssv1656634,nssv1656632,nssv1656643,nssv1656644,nssv1656642,nssv1656637,nssv1656640,nssv1656635,nssv1656641 M 270 0 13 "" NA18537,NA18552,NA18566,NA18593,NA18609,NA18620,NA18945,NA18951,NA18953,NA18956,NA18973,NA18976,NA18991 esv25741 1 40739619 40742447 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13150 M 40 0 1 "" NA19190 nsv819581 1 40740139 40743009 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419486 M 2 0 1 "" AK1 nsv822420 1 40740783 40742603 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1438584,nssv1439454,nssv1428822,nssv1422367,nssv1437935,nssv1435651,nssv1426386 M 31 0 7 "" AK12,AK6,NA18537,NA18552,NA18566,NA18951,NA18973 nsv513986 1 40740984 40742464 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2858602,nssv2866823,nssv2867370,nssv2860901,nssv2862378,nssv2860650,nssv2858889,nssv2866362,nssv2859196,nssv2864221,nssv2867983,nssv2867967,nssv2867371,nssv2865457,nssv2864391,nssv2861181,nssv2862290,nssv2865955,nssv2867454,nssv2864796,nssv2864659,nssv2859298,nssv2862933,nssv2859155,nssv2863674,nssv2866387,nssv2862110,nssv2867654,nssv2867705 M 2366 0 29 "" NA18497,NA18498,NA18537,NA18552,NA18566,NA18593,NA18609,NA18620,NA18945,NA18953,NA18956,NA18973,NA19184,NA19186,NA19190,NA21312,NA21359,NA21361,NA21381,NA21423,NA21425,NA21454,NA21479,NA21480,NA21485,NA21599,NA21601,NA21608,NA21614 nsv546065 1 40781029 40804646 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712569 M 17421 0 1 ZNF684 dgv243n54 1 40785847 40799427 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546067,nsv546066 M 17421 0 2 ZNF684 nsv546068 1 40790542 40796098 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712572 M 17421 0 1 "" dgv244n54 1 40790542 40800906 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546069,nsv546070,nsv546072,nsv546071 M 17421 0 7 "" esv28574 1 40793794 40801068 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19467,esv10486 M 40 0 7 "" NA11894,NA12239,NA12414,NA18502,NA18508,NA18858,NA18916 nsv160971 1 40794272 40801210 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179549 M 24 "" nsv822431 1 40794289 40798568 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1429558,nssv1431068 M 31 0 2 "" AK14,AK18 dgv245n54 1 40794563 40796098 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546073,nsv546074 M 17421 0 10 "" nsv516619 1 40794563 40799336 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv666582,nssv689850,nssv672519,nssv666888,nssv664864,nssv671657,nssv672295,nssv691007,nssv653231,nssv680334,nssv684450,nssv689534,nssv662673,nssv673153,nssv690433,nssv667789,nssv663616,nssv690948,nssv654770 M 2026 0 19 "" dgv246n54 1 40794563 40799567 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546077,nsv546075,nsv546076 M 17421 0 6 "" esv2422112 1 40794563 40800797 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5078272,essv5070027,essv5093829,essv5013734,essv5134182,essv5146960,essv5042242,essv5090030,essv5018970,essv5126297,essv5099601,essv5003557,essv5015947,essv5140216,essv5014732,essv5090744,essv5008069,essv5013688,essv5133217,essv5065815,essv5052721,essv5019620,essv5135793,essv5012360,essv5126113,essv5154458,essv5055084,essv5054587,essv5144533,essv5085310,essv5057629,essv5082042,essv5088566,essv5137735,essv5093420,essv5057086,essv5053793,essv5157454,essv5024924,essv5012822,essv5069345,essv5160165,essv5052522,essv5122140,essv5071010,essv5136892,essv5073338,essv5006452,essv5118069,essv5085094,essv5104203,essv5011762,essv5062938,essv5078884,essv5122132,essv5104421,essv5034771,essv5092961,essv5156571,essv5144190,essv5008872,essv5116017,essv5152021,essv5024231,essv5133407,essv5148005,essv5045578,essv5124055,essv5129017,essv5052971,essv5151269,essv5074853,essv5016126,essv5110834,essv5096588,essv5100900,essv5009795,essv5153128,essv5071215,essv5044603,essv5144927,essv5067020 M 1184 0 82 "" NA10863,NA11894,NA12234,NA12239,NA12248,NA12264,NA12336,NA12341,NA12343,NA12716,NA12812,NA12815,NA17972,NA17983,NA18149,NA18498,NA18500,NA18503,NA18504,NA18506,NA18508,NA18518,NA18519,NA18544,NA18562,NA18594,NA18610,NA18636,NA18670,NA18853,NA18854,NA18858,NA18860,NA18916,NA18965,NA18976,NA18990,NA19078,NA19149,NA19315,NA19372,NA19445,NA19451,NA19656,NA19676,NA19761,NA19762,NA19763,NA19771,NA19772,NA19774,NA19788,NA19904,NA19915,NA19985,NA20127,NA20128,NA20334,NA20335,NA20336,NA20337,NA20510,NA20515,NA20521,NA20535,NA20756,NA20816,NA20849,NA20874,NA20877,NA20882,NA20884,NA20885,NA21101,NA21105,NA21123,NA21297,NA21301,NA21352,NA21473,NA21631,NA21685 nsv546078 1 40794563 40800906 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712596,nssv712597,nssv712600,nssv712599,nssv712598,nssv712605,nssv712604,nssv712602,nssv712606,nssv712601,nssv712603,nssv712611,nssv712610,nssv712609,nssv712608,nssv712607,nssv712614,nssv712612,nssv712613 M 17421 0 19 "" nsv546079 1 40794776 40804646 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712615 M 17421 0 1 "" esv2409848 1 40796688 40797064 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4750530 M 1 0 1 "" NA18507 nsv546080 1 40797216 40800906 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712616 M 17421 0 1 "" nsv546081 1 40798870 40800796 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712617 M 17421 0 1 "" dgv247n54 1 40799291 40800906 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546083,nsv546087,nsv546085,nsv546089,nsv546082,nsv546090,nsv546084,nsv546086 M 17421 0 23 "" nsv546088 1 40799336 40804646 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712637 M 17421 0 1 "" nsv599 1 40853155 40886520 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9047 M 9 0 1 RIMS3 NA12156 nsv473068 1 40856358 40856358 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016901 M 9 1 0 "" NA19129 nsv473417 1 40863147 40863147 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012203 M 9 1 0 RIMS3 NA19129 esv8923 1 40993211 40993363 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31364 M 1 0 0 NFYC nsv610 1 40996458 41028137 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9053 M 9 1 0 KCNQ4,NFYC NA12156 esv3385586 1 41011425 41011437 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863690 M 185 1 0 "" NA12005 esv2763298 1 41111252 41149087 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7027723,essv7027701,essv7027734,essv7027679,essv7027712,essv7027690 M 1109 6 0 "" SW_0076,SW_0829,SW_0884,SW_0890,SW_1079,SW_1318 dgv154n100 1 41113194 41149075 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006018,nsv1008475,nsv1001429,nsv1009986 M 29084 4 0 "" dgv155n100 1 41115648 41163300 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006158,nsv1005582,nsv997467 M 29084 3 0 "" dgv248n54 1 41116195 41147030 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546091,nsv546096,nsv546092,nsv546094,nsv546095 M 17421 17 0 "" 1780854436_A,1780862125_A,1780862346_A,1780862443_A,1798860192_A,1798860336_A,HGDP00319,HGDP00614,HGDP00624,HGDP01153,NINDS_18,NINDS_238,NINDS_98 dgv16n27 1 41116195 41156425 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv461217,nsv461228,nsv461306,nsv461328,nsv461239,nsv461206,nsv461195,nsv461261,nsv461250,nsv461150,nsv461139,nsv461161,nsv461295,nsv461173,nsv461272,nsv461184,nsv461284 M 1557 17 0 "" 1780854436_A,1780862125_A,1780862346_A,1780862443_A,1780862551_A,1798860192_A,1798860336_A,HGDP00082,HGDP00319,HGDP00513,HGDP00614,HGDP00624,HGDP00628,HGDP01153,NINDS_18,NINDS_238,NINDS_98 dgv249n54 1 41116195 41159590 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546099,nsv546097,nsv546098,nsv546093,nsv546100 M 17421 8 0 "" 1780862551_A,HGDP00082,HGDP00084,HGDP00513,HGDP00628 esv29727 1 41119009 41153575 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18639 M 40 1 0 "" NA12004 nsv441690 1 41119794 41149087 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656648,nssv1656646,nssv1656645,nssv1656649,nssv1656647 M 270 5 0 "" NA07348,NA07357,NA12004,NA12144,NA12873 nsv470710 1 41119815 41147029 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547726,nssv547728,nssv547727 M 443 3 0 "" HGDP00614,HGDP00615,HGDP00628 nsv516272 1 41119815 41147030 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv654797,nssv689447,nssv667238,nssv679939 M 2026 4 0 "" nsv818156 1 41119815 41147030 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417960,nssv1417961 M 112 2 0 "" NA07348,NA07357 nsv474144 1 41124925 41124925 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017091 M 9 1 0 "" NA18507 nsv461339 1 41127268 41146737 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537738 M 1557 1 0 "" HGDP00615 dgv250n54 1 41127268 41147030 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546102,nsv546101 M 17421 3 0 "" HGDP00615 nsv522723 1 41164805 41168285 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698354 M 2026 0 1 "" nsv159614 1 41171348 41172556 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178192 M 24 "" nsv945900 1 41178457 41181441 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761384,nssv1761370,nssv1760703,nssv1761344,nssv1760692,nssv1761367,nssv1761375,nssv1761355,nssv1760687,nssv1761386,nssv1760699,nssv1761359,nssv1760690,nssv1761391,nssv1760693,nssv1761341,nssv1761383,nssv1761368,nssv1760701,nssv1760714,nssv1760700,nssv1760712,nssv1761376,nssv1761342,nssv1760695,nssv1761343,nssv1760698,nssv1761363,nssv1760697,nssv1761353,nssv1760685,nssv1760715,nssv1760694,nssv1761356,nssv1760706,nssv1761354,nssv1760704,nssv1761369,nssv1760686,nssv1760705,nssv1761381,nssv1761352,nssv1760702,nssv1761387,nssv1760683,nssv1761390,nssv1760710,nssv1761394,nssv1761378,nssv1761340,nssv1761382,nssv1760682,nssv1761380,nssv1761349,nssv1760696,nssv1761345,nssv1760689,nssv1760708,nssv1760713,nssv1760709,nssv1760688,nssv1760717,nssv1760691,nssv1761346,nssv1761377,nssv1761388,nssv1760711,nssv1761373,nssv1760684,nssv1760719,nssv1761379,nssv1761364,nssv1761338,nssv1761339,nssv1761366,nssv1761374,nssv1761361,nssv1761337,nssv1761362,nssv1761358,nssv1761389,nssv1761336,nssv1761371,nssv1760707,nssv1761385,nssv1761350,nssv1761360,nssv1760716,nssv1761348,nssv1761357,nssv1761392,nssv1761372,nssv1761347,nssv1760718,nssv1761351,nssv1761393,nssv1761365 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv621 1 41236609 41250124 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9060 M 9 0 1 CTPS1 NA12156 nsv546103 1 41250031 41315091 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712651 M 17421 0 1 CTPS1,MIR5095,SCMH1,SLFNL1,SLFNL1-AS1 esv3332583 1 41275284 41275340 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898887,essv8898886 M 185 2 0 SCMH1,SLFNL1-AS1 NA18507,NA19116 esv3304788 1 41275294 41275295 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7829962,essv7818342,essv7816360 M 185 3 0 SCMH1,SLFNL1-AS1 NA18507,NA19116,NA19143 esv3427723 1 41275299 41275318 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594013 M 185 1 0 SCMH1,SLFNL1-AS1 NA19143 nsv945901 1 41336461 41337585 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761403,nssv1761145,nssv1761153,nssv1761165,nssv1761151,nssv1761447,nssv1761397,nssv1761164,nssv1761406,nssv1761431,nssv1761409,nssv1761457,nssv1761400,nssv1761148,nssv1761412,nssv1761452,nssv1761419,nssv1761443,nssv1761150,nssv1761168,nssv1761158,nssv1761163,nssv1761401,nssv1761395,nssv1761414,nssv1761448,nssv1761423,nssv1761436,nssv1761404,nssv1761441,nssv1761407,nssv1761146,nssv1761413,nssv1761166,nssv1761411,nssv1761450,nssv1761416,nssv1761159,nssv1761415,nssv1761456,nssv1761405,nssv1761162,nssv1761408,nssv1761428,nssv1761155,nssv1761147,nssv1761424,nssv1761453,nssv1761426,nssv1761439,nssv1761398,nssv1761418,nssv1761417,nssv1761449,nssv1761152,nssv1761438,nssv1761154,nssv1761160,nssv1761402,nssv1761432,nssv1761156,nssv1761444,nssv1761396,nssv1761451,nssv1761149,nssv1761440,nssv1761410,nssv1761144,nssv1761399,nssv1761141,nssv1761157,nssv1761442,nssv1761460,nssv1761437,nssv1761167,nssv1761461,nssv1761422,nssv1761139,nssv1761421,nssv1761142,nssv1761420,nssv1761445,nssv1761433,nssv1761430,nssv1761427,nssv1761143,nssv1761454,nssv1761140,nssv1761435,nssv1761425,nssv1761459,nssv1761434,nssv1761458,nssv1761429,nssv1761161,nssv1761455,nssv1761446 M 97 10 0 MIR5095,SCMH1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv24588 1 41344450 41345732 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9763 M 40 0 2 MIR5095,SCMH1 NA18517,NA19225 nsv519146 1 41354593 41365585 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696623 M 2026 1 0 MIR5095,SCMH1 nsv1013869 1 41359999 41412336 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477086 M 29084 1 0 MIR5095,SCMH1 esv2571087 1 41432700 41434023 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5206154 M 1 0 1 MIR5095,SCMH1 NA18507 esv22527 1 41534563 41538300 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13787 M 40 0 1 "" NA19240 esv3395078 1 41566552 41568250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692328 M 185 1 0 "" NA19239 esv2643183 1 41576653 41578248 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5299791 M 1 0 1 "" NA18507 nsv508171 1 41577470 41747267 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622762 M 4 0 1 EDN2,HIVEP3 NA18994 nsv546104 1 41603634 41633970 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712652 M 17421 0 1 "" esv3410216 1 41608134 41608134 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701368 M 185 1 0 "" NA12878 nsv524868 1 41633970 41634712 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700873 M 2026 0 1 "" nsv474312 1 41653210 41653210 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017901 M 9 1 0 "" NA18507 dgv81e59 1 41662352 41664250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3435759,esv3375243 M 185 2 0 "" NA12878,NA19240 esv2627113 1 41663054 41663789 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5205147 M 1 1 0 "" NA18507 esv3378313 1 41663515 41663756 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740973 M 185 1 0 "" NA19240 nsv633 1 41718085 41763205 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9065 M 9 0 1 EDN2,HIVEP3 NA12156 nsv525172 1 41720331 41725495 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701248 M 2026 0 1 EDN2 nsv461350 1 41720331 41743799 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537744 M 1557 0 1 EDN2 HGDP00433 nsv546105 1 41720331 41743799 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173837 M 17421 0 1 EDN2 HGDP00433 esv2027172 1 41727898 41728364 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4601976 M 1 0 1 "" NA18507 esv21529 1 41764057 41770571 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11297 M 40 1 0 HIVEP3 NA06985 dgv251n54 1 41764232 41768268 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546107,nsv546106 M 17421 4 0 HIVEP3 nsv546108 1 41764343 41768268 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712658,nssv712657 M 17421 1 1 HIVEP3 esv2229339 1 41766569 41766983 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4855638 M 1 0 1 HIVEP3 NA18507 nsv644 1 41779742 41813245 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9073 M 9 1 0 HIVEP3 NA12156 esv1639858 1 41783211 41783211 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3702696 M 2 1 0 HIVEP3 HuRef nsv518313 1 41844025 41847854 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695744 M 2026 0 1 HIVEP3 nsv655 1 41866559 41899052 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2095 M 9 1 0 HIVEP3 NA18555 esv2174819 1 41873634 41874086 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4943981 M 1 0 1 HIVEP3 NA18507 esv1535775 1 41873876 41873932 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3994813 M 2 0 1 HIVEP3 HuRef nsv472825 1 41885005 41885005 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018274 M 9 1 0 HIVEP3 NA18555 esv3334333 1 41927285 41927335 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7862063 M 185 1 0 HIVEP3 NA18516 nsv461361 1 41937718 41971163 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537752 M 1557 0 1 HIVEP3 HGDP00553 nsv546109 1 41937718 41971163 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173838 M 17421 0 1 HIVEP3 HGDP00553 esv3341707 1 41999052 42000150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692332 M 185 1 0 HIVEP3 NA19239 nsv517842 1 42034476 42043750 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695246 M 2026 0 1 HIVEP3 nsv474502 1 42057192 42057192 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015182 M 9 1 0 HIVEP3 NA18956 nsv666 1 42063237 42074543 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9081 M 9 0 1 HIVEP3 NA12156 esv27848 1 42138620 42139210 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19802 M 40 1 0 HIVEP3 NA11993 nsv677 1 42149652 42183227 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5517 M 9 1 0 HIVEP3 NA19129 dgv156n100 1 42155166 42244449 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011769,nsv1001352,nsv1006768 M 29084 3 0 HIVEP3 esv3304449 1 42162883 42162884 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7809974,essv7830445,essv7770762,essv7778271,essv7834245,essv7828901,essv7811502,essv7772293 M 185 8 0 HIVEP3 NA11994,NA12144,NA12154,NA12815,NA12872,NA18964,NA18973,NA19005 esv3407169 1 42162884 42162906 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898895,essv8898888,essv8898889,essv8898894,essv8898891,essv8898890 M 185 6 0 HIVEP3 NA11994,NA12144,NA12154,NA18964,NA18973,NA19005 esv3402472 1 42162895 42162914 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594024,essv9594035 M 185 2 0 HIVEP3 NA12815,NA12872 esv3360626 1 42186985 42187004 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594046 M 185 1 0 HIVEP3 NA19141 nsv829671 1 42193632 42353185 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1445140 M 95 0 1 HIVEP3 nsv519479 1 42289357 42362690 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv656348,nssv671865 M 2026 2 0 "" nsv472439 1 42294477 42294477 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014295 M 9 1 0 "" NA18555 nsv527531 1 42389619 42408092 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703990 M 2026 0 1 GUCA2A,GUCA2B nsv688 1 42406455 42441058 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2935 M 9 1 0 FOXJ3 NA18555 esv24371 1 42421525 42425424 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12093 M 40 0 1 FOXJ3 NA18502 esv22111 1 42459429 42461747 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13732 M 40 0 1 FOXJ3 NA12828 esv3414902 1 42505922 42505930 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863691 M 185 1 0 FOXJ3 NA12005 esv2539470 1 42515199 42516854 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5294377 M 1 0 1 FOXJ3 NA18507 esv3375211 1 42541209 42541270 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898899,essv8898898,essv8898896,essv8898897 M 185 4 0 FOXJ3 NA18522,NA18907,NA19102,NA19138 esv3306125 1 42541211 42541212 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758268,essv7763163,essv7746852,essv7755807 M 185 4 0 FOXJ3 NA18522,NA18907,NA19102,NA19138 nsv822442 1 42610588 42611703 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1432074 M 31 0 1 "" NA18972 esv28389 1 42627770 42630321 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16457 M 40 0 2 RIMKLA NA07045,NA18907 nsv945902 1 42650553 42652813 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761183,nssv1761224,nssv1761175,nssv1761232,nssv1761190,nssv1761227,nssv1761200,nssv1761201,nssv1761250,nssv1761195,nssv1761186,nssv1761261,nssv1761197,nssv1761230,nssv1761247,nssv1761242,nssv1761177,nssv1761225,nssv1761189,nssv1761245,nssv1761252,nssv1761258,nssv1761188,nssv1761265,nssv1761255,nssv1761221,nssv1761178,nssv1761208,nssv1761187,nssv1761207,nssv1761246,nssv1761229,nssv1761179,nssv1761233,nssv1761185,nssv1761235,nssv1761176,nssv1761203,nssv1761182,nssv1761222,nssv1761198,nssv1761199,nssv1761171,nssv1761263,nssv1761181,nssv1761231,nssv1761191,nssv1761260,nssv1761184,nssv1761206,nssv1761249,nssv1761204,nssv1761193,nssv1761194,nssv1761251,nssv1761256,nssv1761253,nssv1761219,nssv1761170,nssv1761202,nssv1761173,nssv1761218,nssv1761254,nssv1761237,nssv1761248,nssv1761223,nssv1761174,nssv1761209,nssv1761180,nssv1761244,nssv1761172,nssv1761220,nssv1761215,nssv1761243,nssv1761236,nssv1761228,nssv1761226,nssv1761205,nssv1761212,nssv1761210,nssv1761213,nssv1761259,nssv1761234,nssv1761241,nssv1761217,nssv1761169,nssv1761214,nssv1761192,nssv1761262,nssv1761264,nssv1761196,nssv1761240,nssv1761239,nssv1761216,nssv1761238,nssv1761211,nssv1761257 M 97 10 0 RIMKLA HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945904 1 42727874 42730715 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761280,nssv1761317,nssv1761290,nssv1761332,nssv1761273,nssv1761335,nssv1761287,nssv1761327,nssv1761271,nssv1762265,nssv1761283,nssv1761309,nssv1761274,nssv1761314,nssv1761294,nssv1762264,nssv1761272,nssv1761319,nssv1762276,nssv1762285,nssv1761278,nssv1761299,nssv1761286,nssv1761331,nssv1761284,nssv1761321,nssv1761297,nssv1761310,nssv1761282,nssv1761324,nssv1761279,nssv1761320,nssv1762271,nssv1761311,nssv1761285,nssv1761312,nssv1762269,nssv1761289,nssv1762273,nssv1762262,nssv1762275,nssv1762266,nssv1761288,nssv1762263,nssv1762270,nssv1761313,nssv1762267,nssv1761306,nssv1761275,nssv1761292,nssv1761268,nssv1761298,nssv1761269,nssv1762286,nssv1762272,nssv1761322,nssv1761267,nssv1761308,nssv1762274,nssv1762282,nssv1761270,nssv1761303,nssv1761281,nssv1761325,nssv1761277,nssv1761329,nssv1762268,nssv1761302,nssv1761276,nssv1761293,nssv1761295,nssv1762261,nssv1761266,nssv1761305,nssv1761326,nssv1762260,nssv1761330,nssv1762279,nssv1761296,nssv1761318,nssv1761300,nssv1761304,nssv1761301,nssv1761291,nssv1761315,nssv1762277,nssv1761328,nssv1762278,nssv1761316,nssv1762283,nssv1762281,nssv1762284,nssv1761323,nssv1761333,nssv1761334,nssv1762280,nssv1761307 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945905 1 42737230 42765442 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762311,nssv1762312,nssv1762305,nssv1762342,nssv1762296,nssv1762358,nssv1762297,nssv1762339,nssv1762298,nssv1762381,nssv1762364,nssv1762338,nssv1762292,nssv1762331,nssv1762289,nssv1762335,nssv1762308,nssv1762336,nssv1762302,nssv1762349,nssv1762369,nssv1762377,nssv1762291,nssv1762354,nssv1762370,nssv1762378,nssv1762306,nssv1762334,nssv1762316,nssv1762337,nssv1762290,nssv1762362,nssv1762304,nssv1762363,nssv1762365,nssv1762382,nssv1762303,nssv1762380,nssv1762295,nssv1762321,nssv1762366,nssv1762324,nssv1762301,nssv1762323,nssv1762293,nssv1762350,nssv1762367,nssv1762361,nssv1762309,nssv1762320,nssv1762315,nssv1762328,nssv1762299,nssv1762313,nssv1762368,nssv1762346,nssv1762294,nssv1762344,nssv1762300,nssv1762327,nssv1762371,nssv1762333,nssv1762318,nssv1762325,nssv1762307,nssv1762356,nssv1762372,nssv1762326,nssv1762288,nssv1762374,nssv1762373,nssv1762383,nssv1762351,nssv1762345,nssv1762375,nssv1762310,nssv1762348,nssv1762347,nssv1762352,nssv1762341,nssv1762360,nssv1762379,nssv1762322,nssv1762343,nssv1762332,nssv1762287,nssv1762357,nssv1762314,nssv1762319,nssv1762329,nssv1762340,nssv1762330,nssv1762359,nssv1762353,nssv1762376,nssv1762317,nssv1762355 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2480910 1 42773311 42774490 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5298591 M 1 1 0 CCDC30 NA18507 esv1025473 1 42773977 42773977 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4104528 M 2 1 0 CCDC30 HuRef nsv829682 1 42827687 43011826 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1445151 M 95 0 1 C1orf50,CCDC30,CLDN19,LEPRE1,PPIH,YBX1 nsv822453 1 42875097 42875537 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423441 M 31 0 1 CCDC30 NA18968 esv2520511 1 42886217 42887782 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5390935 M 1 0 1 CCDC30 NA18507 nsv945906 1 42934659 42935288 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762399,nssv1762417,nssv1762408,nssv1762427,nssv1762466,nssv1762456,nssv1762401,nssv1762443,nssv1762389,nssv1762411,nssv1762405,nssv1762384,nssv1762388,nssv1762473,nssv1762386,nssv1762478,nssv1762402,nssv1762426,nssv1762393,nssv1762455,nssv1762403,nssv1762444,nssv1762462,nssv1762471,nssv1762400,nssv1762435,nssv1762392,nssv1762474,nssv1762390,nssv1762451,nssv1762467,nssv1762434,nssv1762391,nssv1762433,nssv1762464,nssv1762460,nssv1762465,nssv1762409,nssv1762415,nssv1762432,nssv1762398,nssv1762446,nssv1762463,nssv1762459,nssv1762396,nssv1762477,nssv1762406,nssv1762431,nssv1762412,nssv1762418,nssv1762387,nssv1762452,nssv1762468,nssv1762437,nssv1762469,nssv1762414,nssv1762397,nssv1762458,nssv1762385,nssv1762420,nssv1762394,nssv1762475,nssv1762404,nssv1762479,nssv1762395,nssv1762439,nssv1762470,nssv1762421,nssv1762413,nssv1762441,nssv1762461,nssv1762447,nssv1762457,nssv1762442,nssv1762425,nssv1762454,nssv1762430,nssv1762423,nssv1762438,nssv1762422,nssv1762440,nssv1762428,nssv1762416,nssv1762450,nssv1762424,nssv1762480,nssv1762445,nssv1762429,nssv1762436,nssv1762407,nssv1762448,nssv1762419,nssv1762476,nssv1762410,nssv1762449,nssv1762472,nssv1762453 M 97 10 0 YBX1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945907 1 42939103 42941146 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762561,nssv1762521,nssv1762492,nssv1762533,nssv1762498,nssv1762524,nssv1762486,nssv1762518,nssv1762502,nssv1762545,nssv1762558,nssv1762507,nssv1762496,nssv1762504,nssv1762562,nssv1762540,nssv1762512,nssv1762513,nssv1762499,nssv1763494,nssv1762505,nssv1762535,nssv1762567,nssv1763499,nssv1762500,nssv1762526,nssv1762559,nssv1762549,nssv1762564,nssv1762551,nssv1762563,nssv1763500,nssv1762497,nssv1763495,nssv1762484,nssv1762546,nssv1762566,nssv1762481,nssv1762485,nssv1762553,nssv1762495,nssv1762550,nssv1762490,nssv1762516,nssv1762503,nssv1763497,nssv1762491,nssv1762541,nssv1762487,nssv1763493,nssv1762483,nssv1763501,nssv1762565,nssv1762548,nssv1762493,nssv1762523,nssv1762489,nssv1762508,nssv1762510,nssv1762556,nssv1762509,nssv1762530,nssv1762494,nssv1762529,nssv1762482,nssv1762528,nssv1762488,nssv1762543,nssv1762560,nssv1762531,nssv1762501,nssv1762519,nssv1762532,nssv1762534,nssv1762536,nssv1762544,nssv1762515,nssv1763496,nssv1762555,nssv1762552,nssv1762517,nssv1763498,nssv1762511,nssv1762539,nssv1763492,nssv1762554,nssv1762538,nssv1762506,nssv1762557,nssv1762520,nssv1762522,nssv1762547,nssv1762537,nssv1762525,nssv1762514,nssv1762527,nssv1762542 M 97 10 0 YBX1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945908 1 42939103 42955703 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762726 M 97 1 0 YBX1 HGDP00998 esv3337682 1 43055847 43055866 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678402 M 185 1 0 ERMAP NA19240 esv3308455 1 43055861 43055862 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7842723,essv7842093 M 185 2 0 ERMAP NA19238,NA19240 esv3380077 1 43055865 43055873 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674021,essv8674022 M 185 2 0 ERMAP NA19238,NA19240 nsv546110 1 43076560 43077588 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712659 M 17421 0 1 ERMAP nsv998890 1 43119150 43146118 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479539 M 29084 0 1 LOC339539 nsv945909 1 43126827 43130530 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761773,nssv1761800,nssv1761761,nssv1761820,nssv1761757,nssv1761795,nssv1761769,nssv1761818,nssv1761834,nssv1761791,nssv1761766,nssv1761784,nssv1761760,nssv1761790,nssv1761763,nssv1761824,nssv1761830,nssv1761785,nssv1761771,nssv1761775,nssv1761756,nssv1761801,nssv1761772,nssv1761844,nssv1761768,nssv1761821,nssv1761758,nssv1761813,nssv1761781,nssv1761809,nssv1761762,nssv1761789,nssv1761831,nssv1761839,nssv1761829,nssv1761799,nssv1761780,nssv1761808,nssv1761770,nssv1761847,nssv1761783,nssv1761792,nssv1761836,nssv1761845,nssv1761833,nssv1761822,nssv1761765,nssv1761804,nssv1761774,nssv1761840,nssv1761755,nssv1761803,nssv1761767,nssv1761778,nssv1761838,nssv1761793,nssv1761754,nssv1761816,nssv1761764,nssv1761806,nssv1761759,nssv1761841,nssv1761776,nssv1761817,nssv1761832,nssv1761827,nssv1761837,nssv1761823,nssv1763503,nssv1761797,nssv1761835,nssv1761819,nssv1761796,nssv1761825,nssv1761779,nssv1761811,nssv1761807,nssv1763502,nssv1761843,nssv1761786,nssv1761828,nssv1761794,nssv1761846,nssv1761815,nssv1761798,nssv1761814,nssv1761812,nssv1761782,nssv1761826,nssv1761810,nssv1761842,nssv1761848,nssv1761787,nssv1761788,nssv1761802,nssv1761805,nssv1761777 M 97 10 0 LOC339539 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv461372 1 43128798 43133087 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537763 M 1557 0 1 "" HGDP01029 nsv546111 1 43128798 43133087 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173839 M 17421 0 1 "" HGDP01029 esv7082 1 43142818 43143142 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29523 M 1 0 0 "" nsv699 1 43145051 43179097 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4150 M 9 1 0 SLC2A1 NA12878 esv2624629 1 43156835 43158509 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5304199 M 1 0 1 "" NA18507 esv2054916 1 43157111 43157797 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4647796 M 1 0 1 "" NA18507 nsv710 1 43307707 43352508 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9088 M 9 0 1 "" NA12156 nsv522391 1 43319407 43348908 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695171 M 2026 1 0 "" nsv477283 1 43320083 43320083 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015089 M 9 1 0 "" NA18517 nsv518211 1 43331524 43368971 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695634 M 2026 0 1 "" nsv519062 1 43361485 43379318 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696534 M 2026 0 1 "" nsv829693 1 43367715 43551235 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1445162 M 95 0 1 C1orf210,EBNA1BP2,FAM183A,MIR6733,TIE1,TMEM125,WDR65 nsv473567 1 43411976 43411976 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011390 M 9 1 0 WDR65 NA19129 nsv461383 1 43436706 43468295 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537771 M 1557 0 1 WDR65 1780854205_A nsv546112 1 43436706 43468295 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173840 M 17421 0 1 WDR65 1780854205_A esv2565866 1 43466103 43468993 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5306304 M 1 0 1 WDR65 NA18507 nsv546113 1 43466211 43468059 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712660 M 17421 0 1 WDR65 esv27491 1 43466330 43468121 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11904 M 40 0 7 WDR65 NA11894,NA11993,NA18511,NA18861,NA18909,NA19190,NA19225 esv2148585 1 43466457 43468322 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4810378 M 1 0 1 WDR65 NA18507 nsv822464 1 43466498 43468023 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423957,nssv1422368,nssv1439455,nssv1437574,nssv1421449,nssv1432086 M 31 0 6 WDR65 NA18537,NA18547,NA18552,NA18582,NA18972,NA18997 dgv252n54 1 43466655 43468240 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546114,nsv546116,nsv546115,nsv546117 M 17421 0 38 WDR65 dgv253n54 1 43466811 43468240 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546126,nsv546125,nsv546123,nsv546119,nsv546118,nsv546121,nsv546120,nsv546122,nsv546124,nsv546127 M 17421 0 29 WDR65 nsv822476 1 43467483 43468023 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1429559,nssv1423113,nssv1425493,nssv1424733 M 31 0 4 WDR65 AK14,AK2,AK4,NA18999 nsv523115 1 43472557 43478548 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698814 M 2026 0 1 WDR65 nsv508009 1 43503846 43509846 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624209 M 4 0 0 TMEM125 NA18994 nsv546128 1 43539725 43689996 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712728 M 17421 0 1 CDC20,ELOVL1,HYI,MED8,MIR6734,MIR6735,MPL,SZT2,TIE1 nsv508010 1 43611755 43617755 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621466,nssv624210,nssv618493 M 4 0 0 "" CHM,NA15510,NA18994 esv1418115 1 43613210 43613816 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4247016 M 2 0 1 "" HuRef esv3323794 1 43614944 43615000 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898900 M 185 1 0 "" NA18907 esv3306233 1 43614956 43614957 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7763269,essv7746187,essv7761587 M 185 3 0 "" NA18907,NA19238,NA19240 esv3308354 1 43614981 43614982 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841617,essv7842439 M 185 2 0 "" NA19238,NA19240 esv3434948 1 43614982 43615001 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678403 M 185 1 0 "" NA19240 esv3336666 1 43614985 43614993 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674023,essv8674024 M 185 2 0 "" NA19238,NA19240 nsv475219 1 43616327 43616327 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012991 M 9 1 0 "" NA19240 esv2560782 1 43629682 43631172 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5319973 M 1 0 1 SZT2 NA18507 esv5810 1 43629832 43630658 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28251 M 1 0 0 SZT2 esv2400702 1 43629867 43630578 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4603718 M 1 0 1 SZT2 NA18507 esv3099 1 43629979 43630451 CNV loss Wang_et_al_2008 18987735 Sequencing essv25540 M 1 0 1 SZT2 YH nsv159253 1 43630058 43630393 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177831 M 24 SZT2 nsv527798 1 43685177 43689996 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704290 M 2026 0 1 HYI,MIR6735,SZT2 nsv438377 1 43689996 43706276 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv470629,nssv470518 M 269 0 2 HYI,SZT2 NA18853,NA18854 dgv157n100 1 43764210 43845007 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005843,nsv1004888 M 29084 2 0 PTPRF nsv519570 1 43777867 43844653 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705110,nssv675620,nssv703017,nssv673331,nssv674625,nssv662069,nssv657034,nssv660985,nssv682477,nssv686669,nssv656910 M 2026 0 11 PTPRF dgv82e59 1 43797252 43799350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3431707,esv3412000 M 185 2 0 PTPRF NA19239,NA19240 dgv158n100 1 43797717 43858756 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008451,nsv1009429,nsv1008051,nsv1000970,nsv1005653,nsv997446 M 29084 8 0 PTPRF esv3439174 1 43828275 43832178 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808969 M 185 0 0 PTPRF NA12878 esv7506 1 43831639 43832473 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29947 M 1 0 0 PTPRF esv2600447 1 43831811 43832591 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5210869 M 1 0 0 PTPRF NA18507 nsv513636 1 43831937 43834411 OTHER inversion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626888 M 1 0 0 PTPRF 1 esv3326720 1 43832016 43833761 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808970 M 185 0 0 PTPRF NA12878 esv3445133 1 43834252 43835750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692339 M 185 1 0 PTPRF NA19239 esv3364493 1 43834852 43835750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692340 M 185 1 0 PTPRF NA19240 nsv822487 1 43861011 43861471 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431805 M 31 0 1 PTPRF AK20 nsv159510 1 43864440 43866796 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178088 M 24 "" esv21836 1 43868154 43879863 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11621 M 40 1 0 "" NA18505 nsv441691 1 43868287 43878235 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656650,nssv1656653,nssv1656652,nssv1656651 M 270 4 0 "" NA18505,NA18853,NA19221,NA19222 nsv436807 1 43870339 43877271 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465951 M 2 1 0 "" NA18505 nsv945910 1 43981714 43982303 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761856,nssv1761909,nssv1761932,nssv1761943,nssv1761934,nssv1761924,nssv1761861,nssv1761940,nssv1761878,nssv1761911,nssv1761870,nssv1761915,nssv1761854,nssv1761922,nssv1761860,nssv1761874,nssv1761866,nssv1761891,nssv1761873,nssv1761917,nssv1761931,nssv1761872,nssv1761855,nssv1761937,nssv1761859,nssv1761899,nssv1761858,nssv1761884,nssv1761853,nssv1761883,nssv1761926,nssv1761945,nssv1761927,nssv1761886,nssv1761863,nssv1761897,nssv1761877,nssv1761939,nssv1761867,nssv1761918,nssv1761869,nssv1761887,nssv1761852,nssv1761882,nssv1761928,nssv1761898,nssv1761862,nssv1761923,nssv1761871,nssv1761906,nssv1761857,nssv1761896,nssv1761935,nssv1761888,nssv1761933,nssv1761944,nssv1761930,nssv1761941,nssv1761851,nssv1761849,nssv1761850,nssv1761921,nssv1761864,nssv1761913,nssv1761865,nssv1761910,nssv1761868,nssv1761875,nssv1761880,nssv1761889,nssv1761929,nssv1761892,nssv1761890,nssv1761936,nssv1761905,nssv1761916,nssv1761903,nssv1761919,nssv1761900,nssv1761914,nssv1761901,nssv1761938,nssv1761893,nssv1761925,nssv1761881,nssv1761879,nssv1761894,nssv1761902,nssv1761895,nssv1761908,nssv1761907,nssv1761885,nssv1761912,nssv1761942,nssv1761876,nssv1761904,nssv1761920 M 97 10 0 ST3GAL3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv721 1 44077053 44110963 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1100 M 9 1 0 ST3GAL3 NA19240 nsv546129 1 44102635 44110552 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712729,nssv712730 M 17421 2 0 ST3GAL3 esv29502 1 44109897 44110617 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18772 M 40 1 0 ST3GAL3 NA06985 nsv546130 1 44109925 44110445 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712731 M 17421 0 1 ST3GAL3 dgv254n54 1 44109925 44110552 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546131,nsv546135 M 17421 105 24 ST3GAL3 nsv546132 1 44109925 44111162 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712754 M 17421 1 0 ST3GAL3 nsv546133 1 44109925 44115760 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712755 M 17421 1 0 ST3GAL3 nsv546134 1 44109925 44130735 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712756 M 17421 1 0 ST3GAL3 nsv546136 1 44109977 44111162 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712865,nssv712864,nssv712866 M 17421 2 1 ST3GAL3 dgv255n54 1 44109977 44117879 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546137,nsv546138 M 17421 3 2 ST3GAL3 nsv546139 1 44110028 44111162 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712872 M 17421 0 1 ST3GAL3 nsv546140 1 44110322 44110552 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712873 M 17421 0 1 ST3GAL3 esv3444496 1 44126082 44126103 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898901,essv8898905,essv8898903,essv8898906,essv8898902 M 185 5 0 ST3GAL3 NA18499,NA18508,NA18912,NA19102,NA19129 esv3304324 1 44126086 44126087 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758982,essv7756494,essv7761488,essv7755805,essv7758835 M 185 5 0 ST3GAL3 NA18499,NA18508,NA18912,NA19102,NA19129 esv1002363 1 44142591 44144938 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586329 M 3 1 0 ST3GAL3 HuRef esv1721659 1 44143401 44143625 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3901337 M 2 0 1 ST3GAL3 HuRef esv1735166 1 44143642 44143934 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4254684 M 2 0 1 ST3GAL3 HuRef nsv546141 1 44214120 44223821 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712874 M 17421 0 1 ATP6V0B,B4GALT2 nsv732 1 44214949 44231058 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10840 M 9 1 0 ATP6V0B,B4GALT2,CCDC24 NA18956 nsv822498 1 44215549 44216234 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436335 M 31 1 0 ATP6V0B NA18542 nsv546142 1 44228701 44239193 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712875 M 17421 0 1 B4GALT2,CCDC24,SLC6A9 nsv519538 1 44240822 44241618 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv656769,nssv661267,nssv681965 M 2026 0 3 SLC6A9 nsv546143 1 44259867 44297263 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712876 M 17421 0 1 SLC6A9 nsv829704 1 44259986 44425691 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1445418,nssv1445185,nssv1445173,nssv1445240,nssv1445307,nssv1445218,nssv1445318,nssv1445351,nssv1445362,nssv1445196,nssv1445273,nssv1445229,nssv1445296,nssv1445340,nssv1445251,nssv1445407,nssv1445429,nssv1445440,nssv1445384,nssv1445262,nssv1445373,nssv1445284,nssv1445207,nssv1445395,nssv1445329 M 95 0 25 KLF17,SLC6A9 nsv475188 1 44280397 44280397 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017751 M 9 1 0 "" NA19240 nsv945911 1 44331594 44344815 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762878,nssv1762943,nssv1762952,nssv1762895,nssv1762881,nssv1762933,nssv1762951,nssv1762965,nssv1762877,nssv1762935,nssv1761949,nssv1762929,nssv1762890,nssv1762962,nssv1761951,nssv1762957,nssv1762887,nssv1762928,nssv1761948,nssv1762893,nssv1762953,nssv1762915,nssv1762891,nssv1762960,nssv1762894,nssv1762963,nssv1762956,nssv1762910,nssv1762882,nssv1762900,nssv1762898,nssv1762959,nssv1762889,nssv1762909,nssv1761950,nssv1762904,nssv1762899,nssv1762925,nssv1762876,nssv1762926,nssv1762888,nssv1762908,nssv1762948,nssv1762903,nssv1762886,nssv1762966,nssv1762949,nssv1762911,nssv1762901,nssv1762946,nssv1762950,nssv1762924,nssv1762892,nssv1762940,nssv1762955,nssv1762964,nssv1762883,nssv1762917,nssv1761947,nssv1762932,nssv1762954,nssv1762936,nssv1762884,nssv1762902,nssv1762885,nssv1762897,nssv1762880,nssv1762930,nssv1762947,nssv1762934,nssv1762879,nssv1762922,nssv1762931,nssv1762921,nssv1762945,nssv1762907,nssv1762939,nssv1762961,nssv1762913,nssv1762896,nssv1762958,nssv1762918,nssv1762912,nssv1762927,nssv1762906,nssv1761946,nssv1762944,nssv1762914,nssv1762941,nssv1762919,nssv1762937,nssv1762916,nssv1762938,nssv1762923,nssv1762942,nssv1762920,nssv1762905 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2380455 1 44377166 44378056 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4752515 M 1 0 1 "" NA18507 esv1004979 1 44378541 44378624 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574385 M 3 0 1 "" HuRef esv1447929 1 44378586 44378670 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4352804 M 2 0 1 "" HuRef nsv477015 1 44420345 44420345 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015773 M 9 1 0 "" NA12878 nsv158965 1 44439324 44439324 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177543 M 24 "" esv998002 1 44468291 44474125 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565736 M 3 0 1 ERI3 HuRef nsv508011 1 44472662 44478662 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618494 M 4 0 0 ERI3 CHM esv3399053 1 44477376 44477395 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594079 M 185 1 0 ERI3 NA11840 nsv829715 1 44544896 44720377 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1445540,nssv1445551,nssv1445562,nssv1445617,nssv1445640,nssv1445529,nssv1445573,nssv1445484,nssv1445662,nssv1445606,nssv1445473,nssv1445584,nssv1445629,nssv1445451,nssv1445518,nssv1445462,nssv1445595,nssv1445495,nssv1445651,nssv1445506 M 95 20 0 ERI3,RNF220 esv24567 1 44548961 44549591 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10275 M 40 0 1 ERI3 NA18858 nsv514926 1 44593744 44595352 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2868029,nssv2866939,nssv2862958,nssv2859005,nssv2865740,nssv2861590,nssv2860285,nssv2858939,nssv2862449,nssv2860189,nssv2863212,nssv2865820,nssv2859711,nssv2859746,nssv2862165,nssv2860444,nssv2868251,nssv2861647,nssv2865444,nssv2860640,nssv2864053,nssv2862067,nssv2867098,nssv2866917,nssv2860331,nssv2859508,nssv2863236,nssv2867254,nssv2862794,nssv2862242,nssv2864809,nssv2860734,nssv2858684,nssv2860386,nssv2868267,nssv2862033,nssv2864618,nssv2861382,nssv2863730,nssv2860001,nssv2867647,nssv2862847,nssv2859754,nssv2865785,nssv2858762,nssv2867637,nssv2866139,nssv2862095,nssv2863403,nssv2863483,nssv2864668,nssv2863082,nssv2867205,nssv2861232,nssv2864213,nssv2865298,nssv2864314,nssv2864678,nssv2867008,nssv2860169,nssv2861783,nssv2863614,nssv2860044,nssv2864152,nssv2866309,nssv2861917,nssv2867417,nssv2865978,nssv2867602,nssv2862902,nssv2862544,nssv2861089,nssv2862987,nssv2863300,nssv2867943,nssv2862450,nssv2858668,nssv2859323,nssv2865232,nssv2863223,nssv2864480,nssv2865481,nssv2861733,nssv2867354,nssv2862203,nssv2858895,nssv2858734,nssv2861411,nssv2865945,nssv2858865,nssv2858920,nssv2860485,nssv2860745,nssv2862778,nssv2866388,nssv2858919,nssv2866429,nssv2863068,nssv2863975,nssv2866494,nssv2858940,nssv2865301,nssv2860381,nssv2868048,nssv2868003,nssv2864660,nssv2862255,nssv2864101,nssv2862657,nssv2859206,nssv2861307,nssv2860721,nssv2863967,nssv2864989,nssv2860818,nssv2864185,nssv2858780,nssv2859054,nssv2862578,nssv2867455,nssv2865925,nssv2868418,nssv2863156,nssv2863078,nssv2867274,nssv2867508,nssv2865048,nssv2862416,nssv2867674,nssv2865689,nssv2861814,nssv2866369,nssv2867910,nssv2866243,nssv2867735,nssv2858678,nssv2858842,nssv2864597,nssv2866564,nssv2868119,nssv2859273,nssv2865647,nssv2859309,nssv2864701,nssv2858882,nssv2863099,nssv2859772,nssv2863891,nssv2861076,nssv2862174,nssv2867696,nssv2860933,nssv2861690,nssv2862721,nssv2859931,nssv2866597,nssv2868427,nssv2865859,nssv2865114,nssv2862591,nssv2860181,nssv2865242,nssv2865786,nssv2860176,nssv2862131,nssv2865631,nssv2860018,nssv2864665,nssv2860397,nssv2861478,nssv2859167,nssv2865064,nssv2858603,nssv2859988,nssv2862313,nssv2865458,nssv2864677,nssv2858600,nssv2863263,nssv2859910,nssv2865145,nssv2864643,nssv2862158,nssv2863491,nssv2862462,nssv2863443,nssv2860457,nssv2859032,nssv2866506,nssv2866894,nssv2868295,nssv2867291,nssv2861946,nssv2868311,nssv2867181,nssv2858640,nssv2862622,nssv2866323,nssv2867311,nssv2867483,nssv2861684,nssv2864653,nssv2865770,nssv2858523,nssv2860303,nssv2866918,nssv2864833,nssv2866263,nssv2864883,nssv2866718,nssv2868133,nssv2864081,nssv2859462,nssv2867727,nssv2865042,nssv2859006,nssv2859317,nssv2862152,nssv2862339,nssv2868181,nssv2862467,nssv2865562,nssv2867151,nssv2867919,nssv2865994,nssv2862928,nssv2858741,nssv2864848,nssv2861134,nssv2858536,nssv2867790,nssv2860190,nssv2866223,nssv2859409,nssv2867172,nssv2866511,nssv2868199,nssv2866774,nssv2867239,nssv2861634,nssv2861017,nssv2866889,nssv2860013,nssv2867640,nssv2860174,nssv2858997,nssv2867180,nssv2863117,nssv2858967,nssv2859495,nssv2859751,nssv2861707,nssv2863931,nssv2862177,nssv2861529,nssv2865991,nssv2860669,nssv2867497,nssv2861143,nssv2866672,nssv2860919,nssv2862926,nssv2858836,nssv2862334,nssv2864453,nssv2867135,nssv2863020,nssv2860599,nssv2865911,nssv2866114,nssv2859615,nssv2861856,nssv2867352,nssv2863723,nssv2868491,nssv2862940,nssv2867560,nssv2861226,nssv2864943,nssv2862767,nssv2859642,nssv2865715,nssv2867579,nssv2865157,nssv2860184,nssv2860870,nssv2863386,nssv2859128,nssv2860503,nssv2858608,nssv2859905,nssv2865491,nssv2862346,nssv2868118,nssv2859387,nssv2862218,nssv2866777,nssv2860944,nssv2862699,nssv2868480,nssv2859397,nssv2862261,nssv2864237,nssv2864215,nssv2867368,nssv2864537,nssv2868038,nssv2864371,nssv2860970,nssv2862424,nssv2863834,nssv2858754,nssv2863641,nssv2863718,nssv2862260,nssv2866033,nssv2867056,nssv2861393,nssv2859053,nssv2865826,nssv2859195,nssv2867950,nssv2862361,nssv2864079,nssv2867051,nssv2859330,nssv2863318,nssv2864232,nssv2865567,nssv2863109,nssv2864670,nssv2858841,nssv2867109,nssv2861700,nssv2859020,nssv2862099,nssv2860019,nssv2860817,nssv2866277,nssv2867743,nssv2859800,nssv2867799,nssv2863501,nssv2864132,nssv2858710,nssv2867495,nssv2865225,nssv2860352,nssv2858873,nssv2864034,nssv2858535,nssv2866907,nssv2863461,nssv2863708,nssv2863442,nssv2860615,nssv2866749,nssv2865433,nssv2862231,nssv2860932,nssv2863695,nssv2860714,nssv2867866,nssv2864561,nssv2865988,nssv2866363,nssv2868409,nssv2867428,nssv2864416,nssv2859525,nssv2868360,nssv2866293,nssv2867900,nssv2859963,nssv2865128,nssv2865832,nssv2862471,nssv2863332,nssv2862243,nssv2861749,nssv2863749,nssv2858624,nssv2863819,nssv2868378,nssv2859424,nssv2865164,nssv2859699,nssv2866933,nssv2867972,nssv2861513,nssv2859721,nssv2862121,nssv2859500,nssv2860807,nssv2861206,nssv2861261,nssv2863961,nssv2863243,nssv2863675,nssv2861609,nssv2866300,nssv2866143,nssv2867163,nssv2863642,nssv2859151,nssv2863743,nssv2867877,nssv2865331,nssv2866306,nssv2864566,nssv2865466,nssv2865971,nssv2866186,nssv2864100,nssv2863531,nssv2858861,nssv2868404,nssv2866734,nssv2867140,nssv2861418,nssv2865167,nssv2862867,nssv2859292,nssv2862430,nssv2863974,nssv2863703,nssv2867461,nssv2858875,nssv2862658,nssv2866348,nssv2867372,nssv2860183,nssv2864789,nssv2861468,nssv2866075,nssv2865800,nssv2867865,nssv2859299,nssv2867335,nssv2860548,nssv2866475,nssv2864871,nssv2864325,nssv2868120,nssv2859377,nssv2867909,nssv2863270,nssv2861974,nssv2861689,nssv2867538,nssv2861033,nssv2858687,nssv2867762,nssv2865917,nssv2859899,nssv2867212,nssv2858929,nssv2859720,nssv2867818,nssv2859324,nssv2858853,nssv2868124,nssv2867785,nssv2865258,nssv2864499,nssv2861578,nssv2864436,nssv2865336,nssv2858827,nssv2867223,nssv2867196,nssv2866863,nssv2858698,nssv2862482,nssv2866213,nssv2858808,nssv2859836,nssv2863079,nssv2867769,nssv2863890,nssv2865269,nssv2866187,nssv2864642,nssv2863083,nssv2862429,nssv2860786,nssv2861825,nssv2866925 M 2366 488 0 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 esv3387666 1 44629931 44629950 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678405 M 185 1 0 "" NA19240 nsv461395 1 44671585 44892552 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537782 M 1557 1 0 MIR5584,RNF220,TMEM53 1780854105_A nsv546144 1 44671585 44892552 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173841 M 17421 1 0 MIR5584,RNF220,TMEM53 1780854105_A esv3303245 1 44706394 44706395 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768963,essv7769324,essv7767030,essv7767318,essv7763424,essv7764668,essv7769947,essv7766960,essv7767761 M 185 9 0 RNF220 NA07346,NA07347,NA11881,NA11918,NA11931,NA12234,NA12287,NA12892,NA19239 esv3404107 1 44706400 44706419 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594124,essv9594146,essv9594135,essv9594101,essv9594113,essv9594090 M 185 6 0 RNF220 NA07346,NA07347,NA11918,NA11931,NA12234,NA12287 esv3308362 1 44706410 44706411 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837440,essv7838919 M 185 2 0 RNF220 NA19238,NA19240 esv3395208 1 44706420 44706458 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674026,essv8674027 M 185 2 0 RNF220 NA12892,NA19239 esv1005212 1 44745160 44758261 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565520 M 3 0 1 RNF220 HuRef nsv744 1 44752367 44785836 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4160 M 9 1 0 MIR5584,RNF220 NA12878 esv24516 1 44794057 44794784 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10403 M 40 0 1 RNF220 NA19129 esv1001605 1 44855698 44860750 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565131 M 3 1 0 RNF220 HuRef nsv472278 1 44880409 44880409 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017531 M 9 1 0 RNF220 NA18555 nsv478963 1 44953055 44953055 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013971 M 9 1 0 C1orf228 NA18507 nsv998871 1 44969174 45023766 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479514 M 29084 0 1 BEST4,KIF2C,RPS8,SNORD38A,SNORD38B,SNORD46,SNORD55 nsv476842 1 44986243 44986243 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019939 M 9 1 0 KIF2C NA12878 nsv461406 1 44991129 45066105 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537793 M 1557 0 1 BEST4,BTBD19,KIF2C,PLK3,PTCH2,RPS8,SNORD38A,SNORD38B,SNORD46,SNORD55,TCTEX1D4 1780854339_A nsv546145 1 44991129 45066105 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173842 M 17421 0 1 BEST4,BTBD19,KIF2C,PLK3,PTCH2,RPS8,SNORD38A,SNORD38B,SNORD46,SNORD55,TCTEX1D4 1780854339_A nsv945912 1 45016428 45021103 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762971,nssv1763025,nssv1762970,nssv1763013,nssv1762980,nssv1763024,nssv1762976,nssv1763020,nssv1762974,nssv1763015,nssv1763048,nssv1763002,nssv1763049,nssv1763035,nssv1763052,nssv1763017,nssv1762988,nssv1763037,nssv1762991,nssv1763038,nssv1762986,nssv1763016,nssv1763046,nssv1763039,nssv1762983,nssv1763007,nssv1762985,nssv1763055,nssv1763045,nssv1763062,nssv1762975,nssv1763006,nssv1762977,nssv1763026,nssv1762972,nssv1763019,nssv1762978,nssv1762992,nssv1763053,nssv1763059,nssv1762996,nssv1763001,nssv1763044,nssv1763056,nssv1762969,nssv1762990,nssv1762984,nssv1763022,nssv1762979,nssv1763054,nssv1762989,nssv1763042,nssv1762987,nssv1763063,nssv1762995,nssv1763011,nssv1763051,nssv1762997,nssv1762982,nssv1763008,nssv1762981,nssv1762967,nssv1763050,nssv1762994,nssv1762968,nssv1763033,nssv1762973,nssv1763032,nssv1762998,nssv1763030,nssv1763047,nssv1763027,nssv1763057,nssv1763061,nssv1763021,nssv1763012,nssv1763018,nssv1763040,nssv1763004,nssv1763029,nssv1763043,nssv1763023,nssv1762999,nssv1763014,nssv1763028,nssv1763041,nssv1763058,nssv1763005,nssv1763060,nssv1763009,nssv1763000,nssv1762993,nssv1763031,nssv1763036,nssv1763003,nssv1763034,nssv1763010 M 97 10 0 RPS8,SNORD38B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546146 1 45030728 45091339 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712877 M 17421 0 1 BTBD19,EIF2B3,PLK3,PTCH2,TCTEX1D4 nsv546147 1 45037461 45043684 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712878 M 17421 0 1 PLK3 esv1064548 1 45054854 45054941 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3716592 M 2 0 1 "" HuRef nsv945913 1 45081472 45083022 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763092,nssv1763154,nssv1763068,nssv1763129,nssv1763147,nssv1763134,nssv1763066,nssv1763131,nssv1763077,nssv1763115,nssv1763072,nssv1763106,nssv1763093,nssv1763124,nssv1763081,nssv1763112,nssv1763143,nssv1763126,nssv1763070,nssv1763128,nssv1763095,nssv1763136,nssv1763069,nssv1763099,nssv1763075,nssv1763110,nssv1763085,nssv1763107,nssv1763067,nssv1763113,nssv1763071,nssv1763117,nssv1763083,nssv1763114,nssv1763082,nssv1763121,nssv1763144,nssv1763089,nssv1763074,nssv1763135,nssv1763080,nssv1763152,nssv1763142,nssv1763104,nssv1763150,nssv1763125,nssv1763073,nssv1763122,nssv1763076,nssv1763103,nssv1763146,nssv1763087,nssv1763084,nssv1763156,nssv1763088,nssv1763116,nssv1763086,nssv1763159,nssv1763145,nssv1763132,nssv1763148,nssv1763119,nssv1763149,nssv1763139,nssv1763079,nssv1763153,nssv1763141,nssv1763151,nssv1763065,nssv1763123,nssv1763078,nssv1763094,nssv1763091,nssv1763160,nssv1763064,nssv1763118,nssv1763157,nssv1763130,nssv1763098,nssv1763120,nssv1763137,nssv1763109,nssv1763100,nssv1763108,nssv1763101,nssv1763102,nssv1763140,nssv1763090,nssv1763138,nssv1763111,nssv1763158,nssv1763097,nssv1763133,nssv1763155,nssv1763127,nssv1763105,nssv1763096 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2474011 1 45189959 45191530 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5288245 M 1 0 1 EIF2B3 NA18507 esv2630872 1 45190215 45190526 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5303392 M 1 0 1 EIF2B3 NA18507 nsv945915 1 45224827 45228321 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763172,nssv1760847,nssv1760883,nssv1764427,nssv1763166,nssv1760893,nssv1763165,nssv1760849,nssv1760884,nssv1760869,nssv1763171,nssv1760886,nssv1760876,nssv1764420,nssv1763178,nssv1760857,nssv1763174,nssv1760854,nssv1760880,nssv1760850,nssv1760877,nssv1760874,nssv1763169,nssv1760845,nssv1763182,nssv1760866,nssv1763168,nssv1760841,nssv1760881,nssv1760868,nssv1764417,nssv1760835,nssv1763167,nssv1760852,nssv1764424,nssv1760844,nssv1763180,nssv1760890,nssv1760878,nssv1760858,nssv1763170,nssv1760871,nssv1763175,nssv1760892,nssv1763177,nssv1760851,nssv1764421,nssv1760833,nssv1763164,nssv1760887,nssv1763179,nssv1760860,nssv1763173,nssv1760836,nssv1760882,nssv1760865,nssv1760875,nssv1764419,nssv1763163,nssv1760861,nssv1763183,nssv1760889,nssv1763176,nssv1760863,nssv1763181,nssv1764425,nssv1763162,nssv1764423,nssv1760879,nssv1760837,nssv1764422,nssv1760856,nssv1760859,nssv1760839,nssv1760885,nssv1760838,nssv1760862,nssv1760853,nssv1760834,nssv1764418,nssv1760873,nssv1760848,nssv1760894,nssv1760855,nssv1760840,nssv1760842,nssv1764426,nssv1760872,nssv1760888,nssv1764416,nssv1760891,nssv1760867,nssv1760864,nssv1760846,nssv1760843,nssv1760870,nssv1763161 M 97 10 0 EIF2B3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945916 1 45254694 45258272 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1760976,nssv1760960,nssv1760923,nssv1760918,nssv1760916,nssv1760940,nssv1760903,nssv1760986,nssv1760900,nssv1760970,nssv1760912,nssv1760956,nssv1760897,nssv1760988,nssv1760915,nssv1760952,nssv1760914,nssv1760928,nssv1760973,nssv1760985,nssv1760981,nssv1760922,nssv1760913,nssv1760967,nssv1760904,nssv1760943,nssv1760978,nssv1760935,nssv1760911,nssv1760939,nssv1760908,nssv1760964,nssv1760972,nssv1760954,nssv1760924,nssv1760937,nssv1760974,nssv1760965,nssv1760910,nssv1760951,nssv1760977,nssv1760983,nssv1760907,nssv1760990,nssv1760980,nssv1760895,nssv1760975,nssv1760921,nssv1760917,nssv1760929,nssv1760898,nssv1760966,nssv1760926,nssv1760947,nssv1760905,nssv1760946,nssv1760979,nssv1760963,nssv1760896,nssv1760932,nssv1760899,nssv1760962,nssv1760906,nssv1760957,nssv1760919,nssv1760948,nssv1760909,nssv1760984,nssv1760902,nssv1760949,nssv1760901,nssv1760927,nssv1760931,nssv1760933,nssv1760987,nssv1760934,nssv1760955,nssv1760942,nssv1760989,nssv1760958,nssv1760953,nssv1760961,nssv1760941,nssv1760968,nssv1760944,nssv1760959,nssv1760920,nssv1760930,nssv1760991,nssv1760925,nssv1760950,nssv1760971,nssv1760945,nssv1760938,nssv1760936,nssv1760982,nssv1760969 M 97 10 0 ZSWIM5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv524385 1 45261178 45264091 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700302 M 2026 0 1 ZSWIM5 nsv546148 1 45272881 45400250 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712879 M 17421 0 1 ZSWIM5 nsv945917 1 45306237 45319142 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761000,nssv1761976,nssv1761013,nssv1761965,nssv1761020,nssv1761964,nssv1760997,nssv1761015,nssv1761009,nssv1761952,nssv1760999,nssv1761963,nssv1761012,nssv1761971,nssv1761997,nssv1761974,nssv1761998,nssv1761987,nssv1761016,nssv1761981,nssv1761011,nssv1761027,nssv1761010,nssv1761958,nssv1761008,nssv1761989,nssv1761994,nssv1761982,nssv1761005,nssv1762007,nssv1761007,nssv1762006,nssv1761003,nssv1761969,nssv1761002,nssv1761025,nssv1760998,nssv1761968,nssv1761023,nssv1761953,nssv1760996,nssv1761978,nssv1761014,nssv1761961,nssv1761004,nssv1761019,nssv1760994,nssv1761979,nssv1761021,nssv1761966,nssv1760993,nssv1761954,nssv1761999,nssv1762012,nssv1762001,nssv1762010,nssv1762000,nssv1761018,nssv1761993,nssv1761990,nssv1762002,nssv1762008,nssv1761001,nssv1761959,nssv1760995,nssv1761970,nssv1761996,nssv1761026,nssv1761006,nssv1761985,nssv1761995,nssv1761984,nssv1761973,nssv1761955,nssv1760992,nssv1761988,nssv1762011,nssv1761983,nssv1761957,nssv1761991,nssv1761956,nssv1761992,nssv1762004,nssv1761962,nssv1762003,nssv1761980,nssv1761986,nssv1761972,nssv1761024,nssv1762009,nssv1761022,nssv1761977,nssv1761967,nssv1761017,nssv1761960,nssv1762005,nssv1761975 M 97 10 0 ZSWIM5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv471868 1 45312644 45312644 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020306 M 9 1 0 ZSWIM5 NA18555 esv24105 1 45407164 45418038 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9846 M 40 0 1 ZSWIM5 NA12776 esv2760743 1 45407368 45414375 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027757,essv7027768,essv7027746 M 1109 0 3 ZSWIM5 SW_0190,SW_0621,SW_0815 nsv546149 1 45408389 45414324 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712880 M 17421 0 1 ZSWIM5 dgv256n54 1 45408389 45417684 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546150,nsv546153,nsv546154,nsv546151,nsv546152 M 17421 0 11 ZSWIM5 nsv546155 1 45411057 45415012 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712892 M 17421 0 1 ZSWIM5 nsv546156 1 45411073 45417684 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712893,nssv712894 M 17421 0 2 ZSWIM5 nsv546157 1 45413140 45417684 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712895 M 17421 0 1 ZSWIM5 nsv945918 1 45415202 45433330 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762022,nssv1762043,nssv1762044,nssv1762068,nssv1762028,nssv1762067,nssv1762042,nssv1762059,nssv1762092,nssv1762101,nssv1762025,nssv1762058,nssv1762016,nssv1762049,nssv1762018,nssv1762077,nssv1762093,nssv1762100,nssv1762030,nssv1762074,nssv1762034,nssv1762106,nssv1762031,nssv1762102,nssv1762020,nssv1762071,nssv1762091,nssv1762072,nssv1762032,nssv1762065,nssv1762094,nssv1762069,nssv1762015,nssv1762089,nssv1762096,nssv1762055,nssv1762029,nssv1762064,nssv1762027,nssv1762073,nssv1762017,nssv1762078,nssv1762098,nssv1762083,nssv1762037,nssv1762084,nssv1762041,nssv1762056,nssv1762095,nssv1762079,nssv1762033,nssv1762103,nssv1762035,nssv1762066,nssv1762024,nssv1762038,nssv1762026,nssv1762104,nssv1762021,nssv1762048,nssv1762097,nssv1762057,nssv1762099,nssv1762088,nssv1762014,nssv1762085,nssv1762023,nssv1762036,nssv1762019,nssv1762109,nssv1762090,nssv1762070,nssv1762047,nssv1762087,nssv1762062,nssv1762075,nssv1762060,nssv1762108,nssv1762061,nssv1762107,nssv1762063,nssv1762051,nssv1762045,nssv1762081,nssv1762046,nssv1762039,nssv1762050,nssv1762076,nssv1762082,nssv1762054,nssv1762052,nssv1762013,nssv1762086,nssv1762080,nssv1762053,nssv1762040,nssv1762105 M 97 10 0 ZSWIM5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv998187 1 45449838 45504964 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700650 M 29084 1 0 "" esv2595167 1 45480959 45482447 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5289473 M 1 0 1 "" NA18507 esv2009066 1 45481052 45482089 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4736500 M 1 0 1 "" NA18507 esv1314250 1 45568295 45568295 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4355410 M 2 1 0 MUTYH HuRef esv2750837 1 45568702 45680850 CNV loss Pinto_et_al_2007 17911159 SNP array essv6984094,essv6984095 M 771 0 2 MUTYH,TESK2,TOE1 BEC_774 nsv945919 1 45652121 45656654 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762114,nssv1762174,nssv1762117,nssv1762167,nssv1762189,nssv1762181,nssv1762125,nssv1762156,nssv1762127,nssv1762168,nssv1762115,nssv1762169,nssv1762131,nssv1762133,nssv1762134,nssv1762150,nssv1762118,nssv1762155,nssv1762141,nssv1762161,nssv1762190,nssv1762179,nssv1762139,nssv1762202,nssv1762187,nssv1762136,nssv1762129,nssv1762162,nssv1762119,nssv1762154,nssv1762188,nssv1762137,nssv1762191,nssv1762164,nssv1762113,nssv1762152,nssv1762126,nssv1762110,nssv1762122,nssv1762197,nssv1762124,nssv1762142,nssv1762121,nssv1762165,nssv1762128,nssv1762171,nssv1762138,nssv1762198,nssv1762132,nssv1762203,nssv1762195,nssv1762199,nssv1762130,nssv1762166,nssv1762123,nssv1762176,nssv1762116,nssv1762180,nssv1762194,nssv1762153,nssv1762112,nssv1762205,nssv1762111,nssv1762177,nssv1762192,nssv1762183,nssv1762120,nssv1762206,nssv1762193,nssv1762163,nssv1762196,nssv1762143,nssv1762140,nssv1762201,nssv1762175,nssv1762144,nssv1762172,nssv1762135,nssv1762200,nssv1762170,nssv1762158,nssv1762145,nssv1762186,nssv1762159,nssv1762157,nssv1762146,nssv1762147,nssv1762173,nssv1762184,nssv1762148,nssv1762185,nssv1762160,nssv1762149,nssv1762178,nssv1762151,nssv1762204,nssv1762182 M 97 10 0 TESK2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv829726 1 45670168 45875773 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1445673 M 95 0 1 AKR1A1,CCDC163P,CCDC17,GPBP1L1,MMACHC,NASP,PRDX1,TESK2 esv3893512 1 45714439 46307130 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25791787 M 3017 1 0 AKR1A1,CCDC163P,CCDC17,GPBP1L1,IPP,MAST2,MMACHC,NASP,PIK3R3,PRDX1,RPS15AP10,TESK2,TMEM69 esv1477203 1 45735933 45735933 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4212552 M 2 1 0 CCDC163P HuRef esv1741401 1 45736041 45736041 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4030031 M 2 1 0 CCDC163P HuRef esv1003037 1 45756074 45756169 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570158 M 3 0 1 PRDX1 HuRef nsv479041 1 45836703 45836703 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017462 M 9 0 0 NASP esv3450766 1 45841627 45841646 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678406 M 185 1 0 NASP NA12878 nsv945920 1 45845739 45846471 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762219,nssv1762256,nssv1762209,nssv1761491,nssv1762214,nssv1762241,nssv1762222,nssv1762230,nssv1762224,nssv1761462,nssv1762212,nssv1761489,nssv1762228,nssv1761470,nssv1762215,nssv1762255,nssv1762225,nssv1763185,nssv1762236,nssv1761469,nssv1761473,nssv1762257,nssv1762213,nssv1762245,nssv1762226,nssv1762243,nssv1761480,nssv1761485,nssv1762218,nssv1762246,nssv1761474,nssv1762248,nssv1762211,nssv1762253,nssv1762223,nssv1762240,nssv1761481,nssv1761490,nssv1761478,nssv1763196,nssv1762220,nssv1762244,nssv1761475,nssv1763184,nssv1762221,nssv1762242,nssv1762229,nssv1761467,nssv1762235,nssv1761464,nssv1761479,nssv1762233,nssv1762238,nssv1762259,nssv1761476,nssv1762247,nssv1762227,nssv1763191,nssv1762216,nssv1761488,nssv1762208,nssv1763194,nssv1761477,nssv1761465,nssv1762231,nssv1763195,nssv1762210,nssv1761483,nssv1761472,nssv1762252,nssv1762217,nssv1763189,nssv1762239,nssv1761482,nssv1762207,nssv1761484,nssv1761466,nssv1762234,nssv1763193,nssv1763187,nssv1761486,nssv1762249,nssv1763188,nssv1763186,nssv1762250,nssv1762232,nssv1761463,nssv1761487,nssv1763197,nssv1762237,nssv1762258,nssv1762251,nssv1761468,nssv1763192,nssv1763190,nssv1761471,nssv1762254 M 97 10 0 NASP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv822509 1 45857566 45862229 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431806 M 31 0 1 CCDC17 AK20 nsv1014128 1 45870257 46167127 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476542 M 29084 1 0 GPBP1L1,IPP,MAST2,RPS15AP10,TMEM69 nsv945921 1 45889102 45890723 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1761573,nssv1761557,nssv1761507,nssv1761556,nssv1761501,nssv1761517,nssv1761513,nssv1761564,nssv1761497,nssv1761585,nssv1761509,nssv1761586,nssv1761503,nssv1761552,nssv1761506,nssv1761560,nssv1761570,nssv1761530,nssv1761500,nssv1761583,nssv1761511,nssv1761531,nssv1761574,nssv1761522,nssv1761569,nssv1761567,nssv1761520,nssv1761527,nssv1761508,nssv1761555,nssv1761505,nssv1761544,nssv1761512,nssv1761559,nssv1761578,nssv1761542,nssv1761495,nssv1761587,nssv1761494,nssv1761554,nssv1761504,nssv1761524,nssv1761514,nssv1761582,nssv1761577,nssv1761526,nssv1761571,nssv1761545,nssv1761502,nssv1761540,nssv1761510,nssv1761565,nssv1761516,nssv1761529,nssv1761576,nssv1761568,nssv1761493,nssv1761549,nssv1761572,nssv1761579,nssv1761499,nssv1761541,nssv1761575,nssv1761566,nssv1761521,nssv1761543,nssv1761496,nssv1761528,nssv1761523,nssv1761547,nssv1761498,nssv1761550,nssv1761538,nssv1761561,nssv1761515,nssv1761548,nssv1761533,nssv1761553,nssv1761562,nssv1761532,nssv1761588,nssv1761546,nssv1761535,nssv1761580,nssv1761537,nssv1761558,nssv1761534,nssv1761536,nssv1761518,nssv1761492,nssv1761563,nssv1761581,nssv1761584,nssv1761551,nssv1761525,nssv1761519,nssv1761539 M 97 10 0 GPBP1L1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv479972 1 45916675 45916675 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015095 M 9 0 0 GPBP1L1 nsv473336 1 45918236 45918236 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014441 M 9 1 0 GPBP1L1 NA19129 nsv945922 1 45931361 45932903 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762596,nssv1761615,nssv1762598,nssv1761643,nssv1762593,nssv1762574,nssv1761618,nssv1762573,nssv1761594,nssv1761631,nssv1761610,nssv1761639,nssv1761595,nssv1761636,nssv1761592,nssv1762577,nssv1761606,nssv1762579,nssv1762590,nssv1761633,nssv1762599,nssv1761614,nssv1761620,nssv1762582,nssv1762597,nssv1762608,nssv1761604,nssv1762609,nssv1761617,nssv1761616,nssv1761607,nssv1762581,nssv1761591,nssv1762580,nssv1762595,nssv1761622,nssv1761603,nssv1761638,nssv1761600,nssv1761634,nssv1761599,nssv1762606,nssv1761605,nssv1762572,nssv1761609,nssv1761619,nssv1761608,nssv1761632,nssv1761601,nssv1762605,nssv1761602,nssv1762586,nssv1761611,nssv1762589,nssv1761598,nssv1761624,nssv1761590,nssv1762585,nssv1762594,nssv1761635,nssv1761597,nssv1761628,nssv1762592,nssv1762578,nssv1761593,nssv1761621,nssv1761596,nssv1762602,nssv1762591,nssv1761642,nssv1761613,nssv1762603,nssv1762568,nssv1761626,nssv1761640,nssv1761627,nssv1762607,nssv1762588,nssv1762600,nssv1762575,nssv1761623,nssv1761625,nssv1762571,nssv1762601,nssv1761637,nssv1761589,nssv1762576,nssv1762587,nssv1761630,nssv1761612,nssv1762604,nssv1762583,nssv1762584,nssv1761629,nssv1761641,nssv1762570,nssv1762569 M 97 10 0 IPP,TMEM69 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1007960 1 45940855 45941385 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565778 M 3 1 0 IPP HuRef nsv436781 1 45941452 45941819 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465962 M 2 1 0 IPP NA18505 dgv159n100 1 45944423 46235599 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009355,nsv1006891,nsv1000498 M 29084 3 0 IPP,MAST2 esv1730955 1 45948103 45948501 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3787047 M 2 0 1 IPP HuRef esv2023284 1 45979693 45980375 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4956642 M 1 0 1 IPP NA18507 esv4646 1 45979810 45980266 CNV loss Wang_et_al_2008 18987735 Sequencing essv27087 M 1 0 1 IPP YH nsv159558 1 45979883 45980194 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178136 M 24 IPP nsv546158 1 45989162 46268021 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712896 M 17421 1 0 MAST2 nsv1013628 1 45994204 46129152 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476789 M 29084 1 0 MAST2 dgv257n54 1 45995673 46188935 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546159,nsv546160 M 17421 2 0 MAST2 HGDP01189 nsv461417 1 45995673 46188935 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537804 M 1557 1 0 MAST2 HGDP01189 esv2170120 1 46007019 46007443 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4851842 M 1 0 1 "" NA18507 nsv524147 1 46008685 46210663 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700026 M 2026 1 0 MAST2 nsv436292 1 46015346 46024503 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465973 M 2 0 1 "" NA18505 esv25258 1 46016872 46023933 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17370 M 40 0 1 "" NA18505 nsv945923 1 46019390 46021057 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762620,nssv1762643,nssv1762621,nssv1762684,nssv1762627,nssv1762685,nssv1762615,nssv1762655,nssv1762689,nssv1762646,nssv1762631,nssv1762686,nssv1762628,nssv1762681,nssv1762618,nssv1762704,nssv1762696,nssv1762676,nssv1762629,nssv1762674,nssv1762688,nssv1762701,nssv1762626,nssv1762644,nssv1762695,nssv1762667,nssv1762622,nssv1762673,nssv1762614,nssv1762662,nssv1762616,nssv1762656,nssv1762630,nssv1762663,nssv1762691,nssv1762635,nssv1762692,nssv1762669,nssv1762625,nssv1762680,nssv1762690,nssv1762642,nssv1762624,nssv1762649,nssv1762632,nssv1762678,nssv1762641,nssv1762651,nssv1762613,nssv1762698,nssv1762617,nssv1762633,nssv1762694,nssv1762650,nssv1762611,nssv1762640,nssv1762639,nssv1762664,nssv1762619,nssv1762702,nssv1762623,nssv1762703,nssv1762693,nssv1762677,nssv1762687,nssv1762654,nssv1762638,nssv1762705,nssv1762612,nssv1762679,nssv1762634,nssv1762637,nssv1762682,nssv1762636,nssv1762647,nssv1762683,nssv1762648,nssv1762670,nssv1762675,nssv1762610,nssv1762666,nssv1762645,nssv1762699,nssv1762652,nssv1762672,nssv1762665,nssv1762653,nssv1762657,nssv1762668,nssv1762671,nssv1762658,nssv1762660,nssv1762700,nssv1762661,nssv1762706,nssv1762659,nssv1762697 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv437479 1 46045466 46183733 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467360 M 60 0 1 MAST2 NA07029 nsv1013729 1 46058916 46136467 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476935 M 29084 1 0 MAST2 nsv1009527 1 46058916 46292714 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700652 M 29084 1 0 MAST2,PIK3R3 nsv945924 1 46073163 46074780 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762787,nssv1762757,nssv1762728,nssv1762750,nssv1762711,nssv1762776,nssv1762713,nssv1762758,nssv1762710,nssv1762707,nssv1762716,nssv1762801,nssv1762788,nssv1762794,nssv1762731,nssv1762803,nssv1762712,nssv1762749,nssv1762736,nssv1762769,nssv1762784,nssv1762780,nssv1762789,nssv1762743,nssv1762724,nssv1762755,nssv1762790,nssv1762773,nssv1762714,nssv1762756,nssv1762792,nssv1762733,nssv1762786,nssv1762768,nssv1762709,nssv1762783,nssv1762725,nssv1762781,nssv1762726,nssv1762740,nssv1762785,nssv1762764,nssv1762723,nssv1762771,nssv1762718,nssv1762798,nssv1762721,nssv1762782,nssv1762719,nssv1762778,nssv1762793,nssv1762753,nssv1762729,nssv1762759,nssv1762727,nssv1762760,nssv1762722,nssv1762732,nssv1762791,nssv1762775,nssv1762708,nssv1762737,nssv1762717,nssv1762795,nssv1762735,nssv1762746,nssv1762720,nssv1762767,nssv1762715,nssv1762777,nssv1762738,nssv1762763,nssv1762742,nssv1762734,nssv1762741,nssv1762754,nssv1762770,nssv1762752,nssv1762766,nssv1762761,nssv1762774,nssv1762739,nssv1762762,nssv1762751,nssv1762730,nssv1762797,nssv1762748,nssv1762800,nssv1762772,nssv1762779,nssv1762799,nssv1762747,nssv1762802,nssv1762745,nssv1762744,nssv1762765,nssv1762796 M 97 10 0 MAST2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546161 1 46083862 46270962 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712898 M 17421 1 0 MAST2 nsv1003554 1 46103841 46183244 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466338 M 29084 1 0 MAST2 esv3307196 1 46105777 46105778 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7761146,essv7748306 M 185 2 0 MAST2 NA18573,NA18940 esv3448249 1 46105779 46105833 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898907,essv8898908 M 185 2 0 MAST2 NA18573,NA18940 esv2761743 1 46112445 46799330 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7027779,essv7027790 M 1109 2 0 DMBX1,FAAH,KNCN,LOC729041,LRRC41,LURAP1,MAST2,MKNK1,MKNK1-AS1,NSUN4,PIK3R3,POMGNT1,RAD54L,TSPAN1,UQCRH SW_1193,SW_1505 nsv472806 1 46121207 46121207 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014902 M 9 1 0 MAST2 NA18555 nsv10139 1 46125048 46150358 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19103 M 31 1 0 MAST2 NA18972 nsv829737 1 46125487 46279011 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1445906,nssv1445784,nssv1445751,nssv1445762,nssv1445928,nssv1445884,nssv1445717,nssv1445773,nssv1445706,nssv1445895,nssv1445795,nssv1445862,nssv1445695,nssv1445806,nssv1445684,nssv1445917,nssv1445851,nssv1445817,nssv1445740,nssv1445839,nssv1445873,nssv1445828,nssv1445728 M 95 23 0 MAST2,PIK3R3 esv2583928 1 46137998 46139522 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5204188 M 1 0 1 MAST2 NA18507 esv9144 1 46138459 46139221 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31585 M 1 0 0 MAST2 esv1000231 1 46138520 46139108 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565041 M 3 0 1 MAST2 HuRef esv5205 1 46138661 46139087 CNV loss Wang_et_al_2008 18987735 Sequencing essv27646 M 1 0 1 MAST2 YH esv1778390 1 46138712 46139041 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3681392 M 2 0 1 MAST2 HuRef esv3368524 1 46143436 46143447 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863692,essv7863693 M 185 2 0 MAST2 NA11992,NA18522 nsv522438 1 46235468 46273580 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705796 M 2026 0 1 MAST2 nsv1007750 1 46243880 46325151 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700653 M 29084 1 0 MAST2,PIK3R3 nsv515934 1 46266047 46275423 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv665376,nssv676725,nssv661378,nssv702190,nssv689962,nssv700228 M 2026 0 6 MAST2 nsv508012 1 46312696 46318696 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621467 M 4 0 0 PIK3R3 NA15510 nsv475809 1 46358898 46358898 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018598 M 9 1 0 PIK3R3 NA12878 nsv527878 1 46421633 46432882 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704379 M 2026 1 0 POMGNT1,TSPAN1 nsv822520 1 46423073 46434288 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431807 M 31 0 1 POMGNT1,TSPAN1 AK20 nsv470711 1 46432882 46583117 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547729 M 443 1 0 LRRC41,LURAP1,NSUN4,POMGNT1,RAD54L,UQCRH HGDP01223 esv3326121 1 46451608 46451627 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594201,essv9594212,essv9594190,essv9594179,essv9594157,essv9594168 M 185 6 0 LURAP1,POMGNT1 NA07346,NA11881,NA11918,NA12815,NA18970,NA19141 esv3306122 1 46451617 46451618 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7767787,essv7769614,essv7766998,essv7767539,essv7769955,essv7765795,essv7766060,essv7766432 M 185 8 0 LURAP1,POMGNT1 NA07346,NA11881,NA11918,NA12814,NA12815,NA12873,NA18970,NA19141 esv1137837 1 46451634 46451634 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4125798 M 2 1 0 LURAP1,POMGNT1 HuRef nsv829748 1 46497095 46648709 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1445939 M 95 0 1 FAAH,LRRC41,NSUN4,RAD54L,UQCRH esv3832 1 46575847 46576271 CNV loss Wang_et_al_2008 18987735 Sequencing essv26273 M 1 0 1 "" YH esv22272 1 46578239 46582884 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12311 M 40 0 1 NSUN4 NA12776 nsv546162 1 46580184 46643348 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712899 M 17421 0 1 FAAH,NSUN4 dgv258n54 1 46580629 46582369 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546163,nsv546164 M 17421 0 2 NSUN4 nsv159955 1 46586130 46592914 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178533 M 24 NSUN4 nsv1009193 1 46712586 46858254 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482658 M 29084 1 0 DMBX1,KNCN,MKNK1,MKNK1-AS1,MOB3C nsv1008246 1 46780431 46842432 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463957,nssv3463717,nssv3700654 M 29084 0 3 KNCN,MKNK1,MKNK1-AS1 nsv755 1 46781904 46813617 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10857 M 9 1 0 KNCN,MKNK1,MKNK1-AS1 NA18956 esv3329869 1 46819652 46821250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692350 M 185 1 0 MKNK1 NA19239 nsv522319 1 46853328 46866854 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695099 M 2026 0 1 MOB3C nsv1007280 1 46860703 46902175 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475189 M 29084 1 0 ATPAF1 nsv819064 1 46871946 46872189 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419437 M 2 0 1 "" AK1 esv1238931 1 47014731 47014731 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3950932 M 2 1 0 "" HuRef nsv1011086 1 47031665 47077778 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471089 M 29084 1 0 CYP4B1 nsv1010063 1 47036792 47057705 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473801,nssv3476936 M 29084 2 0 CYP4B1 nsv546165 1 47039177 47045372 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712902 M 17421 0 1 CYP4B1 dgv160n100 1 47043529 47094569 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004246,nsv1004143 M 29084 2 0 CYP4B1,CYP4Z2P nsv945927 1 47082124 47090970 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1762830,nssv1763507,nssv1762822,nssv1763510,nssv1763827,nssv1762866,nssv1762846,nssv1763511,nssv1762820,nssv1762862,nssv1762835,nssv1762873,nssv1762823,nssv1763814,nssv1762847,nssv1762872,nssv1763821,nssv1762848,nssv1762842,nssv1762851,nssv1762839,nssv1763512,nssv1762825,nssv1762856,nssv1762837,nssv1763801,nssv1762838,nssv1762845,nssv1763822,nssv1762869,nssv1762836,nssv1763803,nssv1762849,nssv1763508,nssv1762829,nssv1763816,nssv1762834,nssv1762861,nssv1763819,nssv1763513,nssv1762826,nssv1762859,nssv1763824,nssv1762855,nssv1762824,nssv1762850,nssv1762828,nssv1762860,nssv1763820,nssv1763815,nssv1763504,nssv1762844,nssv1762840,nssv1762865,nssv1763823,nssv1763817,nssv1762833,nssv1762818,nssv1762832,nssv1763806,nssv1763826,nssv1763514,nssv1762819,nssv1763506,nssv1763825,nssv1762843,nssv1762827,nssv1762874,nssv1762831,nssv1763802,nssv1762821,nssv1763808,nssv1763812,nssv1762875,nssv1762854,nssv1762868,nssv1762867,nssv1762871,nssv1763807,nssv1763509,nssv1762864,nssv1763505,nssv1763811,nssv1762852,nssv1762863,nssv1762841,nssv1762853,nssv1763818,nssv1763800,nssv1763809,nssv1763804,nssv1762857,nssv1763813,nssv1763810,nssv1762870,nssv1763805,nssv1762858 M 97 10 0 CYP4Z2P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv525401 1 47090987 47102234 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701524 M 2026 0 1 CYP4Z2P nsv1009338 1 47131119 47327840 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467495 M 29084 1 0 CYP4A11,CYP4X1,CYP4Z1,CYP4Z2P esv2763300 1 47131119 47401361 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7027801 M 1109 1 0 CYP4A11,CYP4A22,CYP4X1,CYP4Z1,CYP4Z2P SW_1456 nsv945928 1 47165325 47187200 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763524,nssv1763604,nssv1763518,nssv1763550,nssv1763597,nssv1763570,nssv1763595,nssv1763552,nssv1763526,nssv1763551,nssv1763527,nssv1763588,nssv1763546,nssv1763605,nssv1763532,nssv1763578,nssv1763592,nssv1763554,nssv1763535,nssv1763580,nssv1763543,nssv1763553,nssv1763528,nssv1763584,nssv1763520,nssv1763568,nssv1763594,nssv1763575,nssv1763536,nssv1763581,nssv1763598,nssv1763566,nssv1763601,nssv1763558,nssv1763534,nssv1763549,nssv1763517,nssv1763585,nssv1763519,nssv1763561,nssv1763596,nssv1763556,nssv1763529,nssv1763577,nssv1763531,nssv1763586,nssv1763593,nssv1763540,nssv1763544,nssv1763579,nssv1763522,nssv1763602,nssv1763533,nssv1763541,nssv1763539,nssv1763563,nssv1763521,nssv1763572,nssv1763530,nssv1763609,nssv1763537,nssv1763571,nssv1763599,nssv1763559,nssv1763600,nssv1763542,nssv1763523,nssv1763557,nssv1763525,nssv1763538,nssv1763516,nssv1763564,nssv1763545,nssv1763582,nssv1763608,nssv1763610,nssv1763567,nssv1763603,nssv1763587,nssv1763565,nssv1763607,nssv1763574,nssv1763573,nssv1763576,nssv1763515,nssv1763583,nssv1763591,nssv1763547,nssv1763611,nssv1763589,nssv1763569,nssv1763548,nssv1763560,nssv1763590,nssv1763606,nssv1763562,nssv1763555 M 97 10 0 CYP4A11 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546166 1 47180326 47268192 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712903 M 17421 0 1 CYP4X1 nsv461428 1 47260172 47296851 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537815 M 1557 1 0 CYP4X1 HGDP00674 nsv546167 1 47260172 47296851 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173844 M 17421 1 0 CYP4X1 HGDP00674 esv24824 1 47338177 47346769 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13964 M 40 0 1 CYP4Z1 NA18502 nsv945929 1 47351338 47390082 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763694,nssv1763703,nssv1763616,nssv1763688,nssv1763623,nssv1763612,nssv1763633,nssv1763644,nssv1763615,nssv1763651,nssv1763619,nssv1763686,nssv1763618,nssv1763663,nssv1763626,nssv1763708,nssv1763641,nssv1763666,nssv1763624,nssv1763681,nssv1763629,nssv1763678,nssv1763620,nssv1763657,nssv1763617,nssv1763685,nssv1763698,nssv1763687,nssv1763691,nssv1763652,nssv1763622,nssv1763649,nssv1763689,nssv1763677,nssv1763625,nssv1763650,nssv1763631,nssv1763653,nssv1763640,nssv1763667,nssv1763628,nssv1763675,nssv1763690,nssv1763682,nssv1763643,nssv1763668,nssv1763630,nssv1763655,nssv1763695,nssv1763647,nssv1763697,nssv1763648,nssv1763632,nssv1763665,nssv1763614,nssv1763699,nssv1763693,nssv1763670,nssv1763634,nssv1763658,nssv1763636,nssv1763639,nssv1763621,nssv1763660,nssv1763696,nssv1763656,nssv1763692,nssv1763701,nssv1763613,nssv1763672,nssv1763627,nssv1763683,nssv1763700,nssv1763674,nssv1763654,nssv1763646,nssv1763669,nssv1763676,nssv1763642,nssv1763661,nssv1763679,nssv1763684,nssv1763638,nssv1763680,nssv1763662,nssv1763635,nssv1763664,nssv1763671,nssv1763706,nssv1763702,nssv1763645,nssv1763707,nssv1763704,nssv1763673,nssv1763637,nssv1763659,nssv1763705 M 97 10 0 CYP4A22,CYP4Z1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3422993 1 47422470 47422581 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652089 M 185 1 0 PDZK1IP1 NA19240 esv1709924 1 47422845 47422845 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3834849 M 2 1 0 PDZK1IP1 HuRef nsv478840 1 47438896 47438896 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013730 M 9 1 0 "" NA18507 nsv475925 1 47459878 47459878 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012005 M 9 1 0 TAL1 NA12878 nsv475889 1 47459903 47459903 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017670 M 9 1 0 TAL1 NA12878 nsv441692 1 47486248 47501675 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656654,nssv1656655 M 270 2 0 STIL NA18547,NA18608 nsv822531 1 47486479 47502670 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437585 M 31 1 0 STIL NA18547 esv3448549 1 47510431 47510450 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678407 M 185 1 0 STIL NA12878 esv33183 1 47548818 47549941 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv95098 M 51 1 0 STIL 21721 nsv546168 1 47654565 47654703 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712904 M 17421 0 1 FOXE3 nsv546169 1 47654565 47655606 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712905 M 17421 1 0 FOXE3 dgv259n54 1 47654565 47662004 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546170,nsv546184 M 17421 0 2 FOXE3 dgv260n54 1 47655069 47655433 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546174,nsv546171 M 17421 0 3 FOXE3 dgv261n54 1 47655069 47655606 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546172,nsv546176 M 17421 0 3 FOXE3 dgv262n54 1 47655069 47655611 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546173,nsv546175 M 17421 2 0 FOXE3 dgv263n54 1 47655115 47655611 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546177,nsv546179,nsv546183,nsv546178 M 17421 22 9 FOXE3 dgv264n54 1 47655225 47655611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546181,nsv546182,nsv546187,nsv546185,nsv546186,nsv546180 M 17421 0 10 FOXE3 nsv546188 1 47655348 47655606 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712957 M 17421 0 1 FOXE3 nsv546189 1 47655348 47655611 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712960,nssv712959,nssv712958,nssv712961 M 17421 1 3 FOXE3 nsv1001779 1 47656816 47884072 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700656 M 29084 1 0 FOXD2,FOXD2-AS1 nsv945930 1 47734259 47738991 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763794,nssv1763739,nssv1763724,nssv1763759,nssv1763723,nssv1763768,nssv1763729,nssv1763734,nssv1763726,nssv1763785,nssv1763714,nssv1763732,nssv1763786,nssv1763756,nssv1763737,nssv1764725,nssv1763716,nssv1763742,nssv1763791,nssv1763764,nssv1763730,nssv1763784,nssv1763717,nssv1763783,nssv1763728,nssv1763755,nssv1763722,nssv1763760,nssv1763719,nssv1763775,nssv1763738,nssv1763709,nssv1763733,nssv1763782,nssv1763720,nssv1763754,nssv1763715,nssv1764724,nssv1763712,nssv1763777,nssv1763740,nssv1763741,nssv1763725,nssv1763779,nssv1763787,nssv1763763,nssv1763789,nssv1763743,nssv1763718,nssv1763774,nssv1763727,nssv1763749,nssv1763721,nssv1763761,nssv1763713,nssv1764729,nssv1763792,nssv1763773,nssv1763795,nssv1763753,nssv1763731,nssv1763796,nssv1763711,nssv1763769,nssv1763793,nssv1763750,nssv1763790,nssv1763772,nssv1763710,nssv1763745,nssv1763788,nssv1763736,nssv1763748,nssv1763767,nssv1763771,nssv1763765,nssv1763778,nssv1764727,nssv1763770,nssv1763797,nssv1763799,nssv1763747,nssv1763744,nssv1763776,nssv1763780,nssv1763746,nssv1763751,nssv1763762,nssv1763757,nssv1764726,nssv1763798,nssv1763766,nssv1763752,nssv1764728,nssv1763758,nssv1763735,nssv1763781 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26721 1 47749534 47750195 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11930 M 40 0 1 "" NA18523 nsv546190 1 47789654 47835937 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712962 M 17421 0 1 "" esv3351931 1 47820262 47820281 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594224 M 185 1 0 "" NA12814 dgv85e59 1 47829352 47830550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3428812,esv3358731 M 185 2 0 "" NA19239,NA19240 esv8288 1 47829580 47830352 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30729 M 1 0 0 "" esv993664 1 47830866 47830866 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585021 M 3 1 0 "" HuRef esv3385909 1 47830868 47830868 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8638847 M 185 0 0 "" nsv160603 1 47830868 47830868 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179181 M 24 "" nsv515678 1 47835937 47837606 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv672560,nssv664347,nssv682478 M 2026 0 3 "" nsv829760 1 47883713 48080775 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1445950 M 95 0 1 TRABD2B nsv473348 1 47903631 47903631 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017441 M 9 1 0 "" NA19129 esv3302534 1 47924983 47925086 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731335 M 185 1 0 "" NA12878 esv3345211 1 47924996 47925097 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670886 M 185 1 0 "" NA12878 nsv1001126 1 47937209 48093449 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700657 M 29084 1 0 TRABD2B nsv161055 1 47946687 47946770 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179633 M 24 "" esv1008760 1 47946726 47946809 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566936 M 3 0 1 "" HuRef esv1734715 1 47946807 47946891 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3816597 M 2 0 1 "" HuRef nsv515794 1 47947454 47950514 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv680790,nssv691214,nssv694006,nssv662898,nssv691966,nssv660050,nssv673299,nssv662482,nssv664814,nssv690119,nssv661894 M 2026 0 11 "" nsv1003161 1 47980302 48059150 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700658 M 29084 0 1 TRABD2B esv2519585 1 47981097 47982028 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5320124 M 1 1 0 "" NA18507 nsv518055 1 47989216 47989473 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695466 M 2026 0 1 "" nsv998583 1 48004718 48089464 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466328,nssv3464054 M 29084 2 0 TRABD2B nsv461450 1 48009550 48055171 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537836 M 1557 0 1 TRABD2B 1780862021_A nsv546191 1 48009550 48055171 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173845 M 17421 0 1 TRABD2B 1780862021_A nsv766 1 48143807 48178011 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9101 M 9 1 0 TRABD2B NA12156 esv1265813 1 48175363 48175488 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3690292 M 2 0 1 TRABD2B HuRef nsv511691 1 48225170 48229097 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626330 M 1 0 1 TRABD2B 1 esv21603 1 48241670 48243609 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9981 M 40 0 1 "" NA19240 nsv522413 1 48246580 48255784 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695196 M 2026 1 0 "" esv3893523 1 48336854 48381624 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796595,essv25797052,essv25796568 M 3017 0 3 SKINTL esv4009 1 48465526 48465923 CNV loss Wang_et_al_2008 18987735 Sequencing essv26450 M 1 0 1 SLC5A9 YH nsv1011588 1 48486288 48566455 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700659 M 29084 1 0 SLC5A9,SPATA6 esv2524958 1 48493994 48496839 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5182226 M 1 0 1 "" NA18507 esv2297840 1 48494551 48496427 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4513063 M 1 0 1 "" NA18507 esv23640 1 48494728 48496296 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11632 M 40 0 1 "" NA18523 esv2478227 1 48494929 48496929 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5345586 M 1 0 1 "" NA18507 nsv508182 1 48502518 48592054 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618972 M 4 0 1 SPATA6 NA10860 esv2762139 1 48517660 48548530 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005373 M 1109 0 1 SPATA6 RW_0230 esv1490132 1 48521976 48521976 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4048787 M 2 1 0 "" HuRef nsv1013615 1 48570543 48600602 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476771 M 29084 0 1 SPATA6 nsv1008621 1 48588427 48636562 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478188 M 29084 0 1 SPATA6 esv2566377 1 48667070 48667131 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5202131 M 1 0 1 SPATA6 NA18507 nsv945931 1 48674468 48675571 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764748,nssv1764824,nssv1764754,nssv1764825,nssv1764738,nssv1764802,nssv1764741,nssv1764795,nssv1764734,nssv1764764,nssv1764812,nssv1764771,nssv1764737,nssv1764788,nssv1764813,nssv1764760,nssv1764742,nssv1764797,nssv1764745,nssv1764769,nssv1764761,nssv1764757,nssv1764811,nssv1764756,nssv1764747,nssv1764782,nssv1764758,nssv1764766,nssv1764750,nssv1764803,nssv1764733,nssv1764800,nssv1764735,nssv1764773,nssv1764759,nssv1764772,nssv1764816,nssv1764820,nssv1764739,nssv1764819,nssv1764751,nssv1764778,nssv1764808,nssv1764753,nssv1764731,nssv1764799,nssv1764732,nssv1764792,nssv1764810,nssv1764794,nssv1764749,nssv1764791,nssv1764740,nssv1764790,nssv1764746,nssv1764781,nssv1764743,nssv1764779,nssv1764736,nssv1764765,nssv1764815,nssv1764801,nssv1764807,nssv1764822,nssv1764809,nssv1764763,nssv1764752,nssv1764786,nssv1764744,nssv1764768,nssv1764814,nssv1764777,nssv1764780,nssv1764798,nssv1764785,nssv1764787,nssv1764804,nssv1764762,nssv1764770,nssv1764805,nssv1764730,nssv1764806,nssv1764826,nssv1764755,nssv1764818,nssv1764774,nssv1764796,nssv1764821,nssv1764793,nssv1764789,nssv1764823,nssv1764817,nssv1764775,nssv1764767,nssv1764776,nssv1764783,nssv1764784 M 97 10 0 SPATA6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv461461 1 48689603 48750171 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537847 M 1557 1 0 SPATA6 HGDP00899 nsv546192 1 48689603 48750171 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173846 M 17421 1 0 SPATA6 HGDP00899 esv3387404 1 48692195 48692217 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863694 M 185 1 0 SPATA6 NA12005 esv1067911 1 48722242 48722242 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4178590 M 2 1 0 "" HuRef nsv945932 1 48733698 48737836 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764913,nssv1764899,nssv1764845,nssv1764853,nssv1764907,nssv1764885,nssv1764840,nssv1764881,nssv1764831,nssv1764895,nssv1764835,nssv1764880,nssv1764837,nssv1764857,nssv1764910,nssv1764914,nssv1764839,nssv1764922,nssv1764906,nssv1764873,nssv1764838,nssv1764872,nssv1764842,nssv1764918,nssv1764844,nssv1764921,nssv1764829,nssv1764892,nssv1764858,nssv1764917,nssv1764832,nssv1764868,nssv1764834,nssv1764864,nssv1764904,nssv1764890,nssv1764848,nssv1764903,nssv1764828,nssv1764886,nssv1764851,nssv1764894,nssv1764908,nssv1764870,nssv1764847,nssv1764854,nssv1764833,nssv1764920,nssv1764846,nssv1764879,nssv1764830,nssv1764916,nssv1764843,nssv1764900,nssv1764841,nssv1764866,nssv1764909,nssv1764869,nssv1764905,nssv1764860,nssv1764856,nssv1764898,nssv1764836,nssv1764859,nssv1764855,nssv1764919,nssv1764849,nssv1764876,nssv1764911,nssv1764863,nssv1764912,nssv1764887,nssv1764861,nssv1764891,nssv1764897,nssv1764889,nssv1764874,nssv1764875,nssv1764865,nssv1764871,nssv1764850,nssv1764896,nssv1764901,nssv1764883,nssv1764882,nssv1764888,nssv1764878,nssv1764884,nssv1764902,nssv1764915,nssv1764852,nssv1764877,nssv1764893,nssv1764827,nssv1764923,nssv1764862,nssv1764867 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3309439 1 48745083 48745084 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836956 M 185 1 0 "" NA19239 esv3329565 1 48745088 48745131 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674028 M 185 1 0 "" NA19239 esv3305659 1 48745107 48745108 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7782235,essv7771679,essv7805692,essv7789716,essv7799788,essv7778699,essv7798791,essv7784132,essv7825304,essv7777799,essv7791629,essv7805581 M 185 12 0 "" NA18498,NA18505,NA18517,NA18522,NA18858,NA19108,NA19114,NA19141,NA19147,NA19172,NA19239,NA19257 esv3373629 1 48745108 48745124 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898913,essv8898911,essv8898918,essv8898912,essv8898909,essv8898919,essv8898914,essv8898916,essv8898917,essv8898910 M 185 10 0 "" NA18498,NA18505,NA18517,NA18522,NA18858,NA19108,NA19114,NA19147,NA19172,NA19257 esv3448314 1 48745113 48745132 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594235 M 185 1 0 "" NA19141 esv3412513 1 48745900 48745900 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740974 M 185 1 0 "" NA19240 nsv546193 1 48808690 48825010 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712963 M 17421 0 1 AGBL4 nsv777 1 48874062 48907721 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1118 M 9 1 0 AGBL4 NA19240 nsv477304 1 48880749 48880749 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013017 M 9 1 0 AGBL4 NA18517 esv992229 1 48935360 48938069 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563572 M 3 1 0 AGBL4 HuRef esv22537 1 48949172 48949757 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10249 M 40 5 0 AGBL4 NA18505,NA18508,NA19099,NA19114,NA19190 nsv829771 1 48951445 49133448 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1445963 M 95 1 0 AGBL4,BEND5 nsv475812 1 48956589 48956589 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012295 M 9 1 0 AGBL4 NA12878 nsv521306 1 49101454 49102291 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697912 M 2026 0 1 AGBL4 esv3308453 1 49117674 49117675 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837860,essv7837147 M 185 2 0 AGBL4 NA12892,NA19239 esv3381286 1 49117693 49117759 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674029,essv8674030 M 185 2 0 AGBL4 NA19238,NA19240 esv3893546 1 49119977 49336168 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25782422 M 3017 0 1 AGBL4 nsv476553 1 49120386 49120386 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014235 M 9 1 0 AGBL4 NA12878 esv3338226 1 49130248 49130265 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898927,essv8898920,essv8898935,essv8898923,essv8898933,essv8898936,essv8898931,essv8898939,essv8898925,essv8898934,essv8898924,essv8898929,essv8898922,essv8898938,essv8898928,essv8898921,essv8898930,essv8898932 M 185 18 0 AGBL4 NA10847,NA11830,NA11881,NA11918,NA11919,NA12414,NA12489,NA12716,NA12749,NA12750,NA18566,NA18593,NA18940,NA18943,NA18945,NA18949,NA18959,NA18964 esv3303981 1 49130257 49130258 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7819393,essv7830839,essv7800252,essv7786796,essv7795570,essv7810212,essv7777322,essv7781734,essv7833319,essv7810424,essv7806508,essv7835997,essv7798119,essv7770280,essv7770921,essv7781137,essv7826995,essv7813501 M 185 18 0 AGBL4 NA10847,NA11830,NA11881,NA11918,NA11919,NA12414,NA12489,NA12716,NA12749,NA12750,NA18566,NA18593,NA18940,NA18943,NA18945,NA18949,NA18959,NA18964 esv3407441 1 49130270 49130289 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594246 M 185 1 0 AGBL4 NA11918 nsv829782 1 49179329 49356826 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1445974 M 95 0 1 AGBL4 nsv527526 1 49179882 49179984 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703981 M 2026 0 1 AGBL4 nsv509235 1 49194007 49202234 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621094 M 4 1 0 AGBL4 NA15510 nsv788 1 49194011 49203632 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4179 M 9 1 0 AGBL4 NA12878 esv3309945 1 49201312 49201313 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836673 M 185 1 0 AGBL4 NA19239 esv3396013 1 49201314 49201330 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674034,essv8674032,essv8674033 M 185 3 0 AGBL4 NA12878,NA12891,NA19239 esv3305785 1 49201318 49201319 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7745336,essv7754378,essv7749205,essv7744374,essv7749729,essv7752256,essv7750133,essv7756947,essv7746758,essv7740509,essv7755548,essv7744315,essv7754691,essv7744196,essv7744697,essv7748501,essv7756100,essv7749452,essv7753437,essv7747335,essv7755854,essv7757459,essv7746478,essv7760221,essv7758425,essv7758098,essv7747958,essv7762273,essv7763137,essv7752467,essv7756399,essv7741771,essv7750885,essv7741140,essv7760421,essv7758184,essv7748874,essv7759232,essv7752898,essv7742136,essv7761502 M 185 41 0 AGBL4 NA06986,NA11894,NA12154,NA12761,NA12878,NA12891,NA18486,NA18489,NA18499,NA18501,NA18502,NA18504,NA18505,NA18508,NA18510,NA18516,NA18517,NA18519,NA18522,NA18561,NA18564,NA18571,NA18605,NA18856,NA18858,NA18861,NA18870,NA18907,NA18909,NA18912,NA18948,NA19093,NA19099,NA19102,NA19108,NA19116,NA19138,NA19147,NA19190,NA19225,NA19239 esv3370544 1 49201320 49201326 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898974,essv8898976,essv8898949,essv8898942,essv8898960,essv8898941,essv8898956,essv8898950,essv8898967,essv8898966,essv8898961,essv8898968,essv8898979,essv8898947,essv8898964,essv8898952,essv8898945,essv8898972,essv8898978,essv8898962,essv8898980,essv8898954,essv8898946,essv8898973,essv8898955,essv8898940,essv8898975,essv8898944,essv8898953,essv8898971,essv8898969,essv8898963,essv8898957,essv8898965,essv8898951,essv8898943,essv8898977,essv8898958 M 185 38 0 AGBL4 NA06986,NA11894,NA12154,NA12761,NA18486,NA18489,NA18499,NA18501,NA18502,NA18504,NA18505,NA18508,NA18510,NA18516,NA18517,NA18519,NA18522,NA18561,NA18564,NA18571,NA18605,NA18856,NA18858,NA18861,NA18870,NA18907,NA18909,NA18912,NA18948,NA19093,NA19099,NA19102,NA19108,NA19116,NA19138,NA19147,NA19190,NA19225 nsv799 1 49228483 49260998 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5553 M 9 1 0 AGBL4 NA19129 nsv829793 1 49280862 49433306 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1445996,nssv1445985 M 95 2 0 AGBL4 esv3893534 1 49302179 49353593 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780783,essv25785771 M 3017 0 2 AGBL4 esv1541386 1 49306174 49306648 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3763364 M 2 0 1 AGBL4 HuRef nsv819895 1 49313712 49320229 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419779 M 2 1 0 AGBL4 AK1 esv1114612 1 49322383 49322437 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4320297 M 2 0 1 AGBL4 HuRef nsv546194 1 49336168 49822077 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712964 M 17421 0 1 AGBL4 nsv525248 1 49352874 49353593 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701341 M 2026 0 1 AGBL4 dgv161n100 1 49362393 49431004 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998704,nsv1007172 M 29084 0 2 AGBL4 esv22622 1 49391899 49392626 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9758 M 40 0 1 AGBL4 NA19129 esv3344523 1 49406441 49406441 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824307 M 185 1 0 AGBL4 NA12878 nsv1011119 1 49416201 49527559 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471127 M 29084 0 1 AGBL4 nsv546195 1 49476673 49626435 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712965 M 17421 0 1 AGBL4 esv3302647 1 49495037 49495276 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7730903 M 185 1 0 AGBL4 NA19238 esv3399424 1 49495059 49495296 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670887 M 185 1 0 AGBL4 NA19238 nsv546196 1 49511300 49688435 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712966 M 17421 0 1 AGBL4 nsv1011949 1 49538025 49669569 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471966 M 29084 0 1 AGBL4 esv2763301 1 49551406 49560169 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027812 M 1109 0 1 AGBL4 SW_1080 dgv162n100 1 49581978 49637327 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014279,nsv1004837 M 29084 0 2 AGBL4 nsv1014234 1 49610594 49656674 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700660 M 29084 0 1 AGBL4 nsv1003151 1 49620311 49735206 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700661 M 29084 0 1 AGBL4 nsv1006879 1 49625733 49703127 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3700662 M 29084 0 1 AGBL4 esv2760076 1 49625745 49771853 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027834,essv7027823,essv7027845 M 1109 0 3 AGBL4 SW_1333,SW_1351,SW_1569 esv3351275 1 49634535 49634575 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898983,essv8898984,essv8898982 M 185 3 0 AGBL4 NA18545,NA18563,NA18949 esv3306252 1 49634538 49634539 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7745153,essv7761943,essv7753264 M 185 3 0 AGBL4 NA18545,NA18563,NA18949 dgv163n100 1 49677211 49774822 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008066,nsv1009003,nsv1004945,nsv1013808,nsv1003675,nsv1003305,nsv1007050,nsv1000637,nsv1001636,nsv1003763,nsv1001653,nsv1001600,nsv1008707,nsv1011252,nsv1013864,nsv1008622,nsv1006935 M 29084 0 94 AGBL4 esv2764215 1 49677223 49774834 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005375,essv7005376,essv7005374 M 1109 0 3 AGBL4 RW_0060,RW_0124,RW_0567 dgv265n54 1 49685647 49770826 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546198,nsv546197 M 17421 0 3 AGBL4 nsv516709 1 49701076 49721593 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv678041,nssv661313,nssv670303,nssv681185 M 2026 0 4 AGBL4 nsv518328 1 49701076 49774752 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695758 M 2026 0 1 AGBL4 nsv1013711 1 49712821 49771841 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476897 M 29084 0 1 AGBL4 dgv266n54 1 49716251 49770826 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546202,nsv546201,nsv546203,nsv546199 M 17421 0 9 AGBL4 dgv267n54 1 49726457 49873128 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546204,nsv546200 M 17421 0 2 AGBL4 dgv164n100 1 49797157 50192976 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010476,nsv1003729 M 29084 0 2 AGBL4 nsv829804 1 49818702 50004651 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446007 M 95 0 1 AGBL4 esv3429396 1 49839596 49839625 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863695 M 185 1 0 AGBL4 NA12005 nsv829815 1 49901767 50094596 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446029,nssv1446018 M 95 2 0 AGBL4 nsv1003968 1 49981989 50319397 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467144 M 29084 1 0 AGBL4,ELAVL4 nsv998640 1 50026542 50172617 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479266 M 29084 0 1 AGBL4 nsv521615 1 50066008 50229424 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698233 M 2026 0 1 AGBL4 esv1301667 1 50186255 50186255 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3766089 M 2 1 0 AGBL4 HuRef esv28920 1 50251023 50257316 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17349 M 40 0 1 AGBL4 NA12828 nsv945934 1 50251559 50256771 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764436,nssv1764945,nssv1764453,nssv1764492,nssv1764468,nssv1764939,nssv1764927,nssv1764933,nssv1764479,nssv1764929,nssv1764454,nssv1764931,nssv1764446,nssv1764428,nssv1764462,nssv1764429,nssv1764482,nssv1764941,nssv1764497,nssv1764935,nssv1764448,nssv1764940,nssv1764463,nssv1764495,nssv1764444,nssv1764491,nssv1764464,nssv1764944,nssv1764499,nssv1764942,nssv1764474,nssv1764928,nssv1764500,nssv1764932,nssv1764445,nssv1764433,nssv1764435,nssv1764430,nssv1764455,nssv1764490,nssv1764450,nssv1764440,nssv1764503,nssv1764438,nssv1764504,nssv1764930,nssv1764452,nssv1764488,nssv1764447,nssv1764943,nssv1764475,nssv1764938,nssv1764485,nssv1764936,nssv1764496,nssv1764934,nssv1764498,nssv1764487,nssv1764505,nssv1764486,nssv1764478,nssv1764489,nssv1764473,nssv1764494,nssv1764461,nssv1764431,nssv1764451,nssv1764937,nssv1764502,nssv1764493,nssv1764434,nssv1764437,nssv1764472,nssv1764471,nssv1764480,nssv1764469,nssv1764460,nssv1764501,nssv1764439,nssv1764443,nssv1764477,nssv1764481,nssv1764484,nssv1764449,nssv1764456,nssv1764466,nssv1764442,nssv1764476,nssv1764457,nssv1764441,nssv1764458,nssv1764467,nssv1764470,nssv1764483,nssv1764459,nssv1764432,nssv1764465 M 97 10 0 AGBL4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv160710 1 50257596 50260873 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179288 M 24 AGBL4 nsv810 1 50272848 50321811 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2121 M 9 0 1 ELAVL4 NA18555 nsv498670 1 50301285 50314489 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585453 M 9 0 1 ELAVL4 nsv829826 1 50332399 50513729 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446040,nssv1446051 M 95 2 0 ELAVL4 esv992405 1 50470171 50470774 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564636 M 3 1 0 "" HuRef nsv528957 1 50538569 50595501 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705653 M 2026 0 1 "" nsv822542 1 50541867 50543817 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431809 M 31 0 1 "" AK20 nsv945935 1 50562036 50566753 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764589,nssv1764531,nssv1764508,nssv1764533,nssv1764583,nssv1767032,nssv1764517,nssv1764538,nssv1764510,nssv1767025,nssv1764509,nssv1764580,nssv1764515,nssv1764556,nssv1764516,nssv1764562,nssv1764523,nssv1764563,nssv1764588,nssv1764529,nssv1764511,nssv1767027,nssv1764513,nssv1767031,nssv1764518,nssv1764565,nssv1764527,nssv1764553,nssv1764525,nssv1767026,nssv1764521,nssv1767028,nssv1764512,nssv1764542,nssv1764526,nssv1764575,nssv1764534,nssv1764579,nssv1764522,nssv1764506,nssv1764535,nssv1764551,nssv1764584,nssv1764582,nssv1764587,nssv1764559,nssv1764507,nssv1764550,nssv1764585,nssv1764545,nssv1764592,nssv1767029,nssv1764586,nssv1764576,nssv1764520,nssv1764561,nssv1764514,nssv1767024,nssv1764530,nssv1764543,nssv1764519,nssv1764574,nssv1764528,nssv1764567,nssv1764591,nssv1764560,nssv1764537,nssv1764572,nssv1764590,nssv1764554,nssv1764524,nssv1764547,nssv1764571,nssv1764549,nssv1764541,nssv1764552,nssv1764532,nssv1764548,nssv1764577,nssv1764568,nssv1764540,nssv1764558,nssv1764546,nssv1764570,nssv1764557,nssv1764569,nssv1764536,nssv1764578,nssv1764573,nssv1764544,nssv1764581,nssv1764593,nssv1764564,nssv1764539,nssv1767030,nssv1764555,nssv1764566 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2655210 1 50607292 50607976 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5340936 M 1 1 0 "" NA18507 esv1410288 1 50620114 50620114 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3722967 M 2 1 0 "" HuRef esv1530192 1 50620190 50620190 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4353403 M 2 1 0 "" HuRef nsv945937 1 50637273 50650865 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767069,nssv1767117,nssv1767127,nssv1767044,nssv1767065,nssv1767061,nssv1767081,nssv1767046,nssv1767093,nssv1767111,nssv1767125,nssv1767036,nssv1767109,nssv1767035,nssv1767059,nssv1767051,nssv1767058,nssv1767038,nssv1767078,nssv1767037,nssv1767104,nssv1767114,nssv1767063,nssv1767040,nssv1767128,nssv1767118,nssv1767129,nssv1767110,nssv1767072,nssv1767050,nssv1767123,nssv1767115,nssv1767087,nssv1767049,nssv1767107,nssv1767116,nssv1767090,nssv1767034,nssv1767076,nssv1767053,nssv1767088,nssv1767064,nssv1767106,nssv1767042,nssv1767099,nssv1767045,nssv1767066,nssv1767055,nssv1767096,nssv1767119,nssv1767074,nssv1767052,nssv1767075,nssv1767062,nssv1767083,nssv1767113,nssv1767122,nssv1767047,nssv1767068,nssv1767054,nssv1767089,nssv1767043,nssv1767101,nssv1767057,nssv1767108,nssv1767041,nssv1767094,nssv1767112,nssv1767080,nssv1767039,nssv1767086,nssv1767048,nssv1767121,nssv1767070,nssv1767060,nssv1767056,nssv1767120,nssv1767082,nssv1767085,nssv1767095,nssv1767033,nssv1767067,nssv1767103,nssv1767098,nssv1767097,nssv1767079,nssv1767091,nssv1767102,nssv1767092,nssv1767126,nssv1767124,nssv1767084,nssv1767077,nssv1767100,nssv1767071,nssv1767105,nssv1767073 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2763302 1 50641271 50652353 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027858 M 1109 0 1 "" SW_1074 esv3393130 1 50768557 50768576 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594268 M 185 1 0 FAF1 NA12873 esv3304930 1 50776473 50776474 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760398,essv7762232,essv7758479,essv7742388,essv7755450,essv7761286,essv7744858,essv7752878,essv7761711,essv7743838 M 185 10 0 FAF1 NA18489,NA18499,NA18505,NA18511,NA18520,NA18909,NA19108,NA19116,NA19190,NA19238 esv3308540 1 50776478 50776479 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838695,essv7837382 M 185 2 0 FAF1 NA19238,NA19240 esv3406482 1 50802546 50802560 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899002,essv8899000,essv8898996,essv8898995,essv8899005,essv8899001,essv8898999,essv8898997,essv8898998 M 185 9 0 FAF1 NA06986,NA07037,NA11829,NA11918,NA12004,NA12043,NA12287,NA12414,NA12776 esv3305347 1 50802547 50802548 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7740701,essv7755765,essv7759720,essv7742887,essv7750743,essv7752159,essv7762065,essv7752589,essv7759524 M 185 9 0 FAF1 NA06986,NA07037,NA11829,NA11918,NA12004,NA12043,NA12287,NA12414,NA12776 nsv821 1 50871659 50905038 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9112 M 9 1 0 FAF1 NA12156 nsv832 1 50941810 50986699 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9118 M 9 0 1 FAF1 NA12156 esv3415111 1 50989286 50989286 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701369 M 185 1 0 FAF1 NA12878 nsv1004803 1 51065478 51229286 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471384 M 29084 1 0 CDKN2C,FAF1 nsv546205 1 51194633 51207185 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712981 M 17421 0 1 CDKN2C,FAF1 nsv526838 1 51242830 51248076 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703195 M 2026 0 1 "" nsv947428 1 51287652 51315916 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2758150 M 97 1 0 "" HGDP00998 nsv945939 1 51395913 51396506 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767232,nssv1767211,nssv1767160,nssv1767147,nssv1767171,nssv1767209,nssv1767225,nssv1767216,nssv1767151,nssv1767198,nssv1767157,nssv1767191,nssv1767165,nssv1767196,nssv1767155,nssv1767214,nssv1767156,nssv1767238,nssv1767175,nssv1767195,nssv1767226,nssv1767234,nssv1767164,nssv1767185,nssv1767229,nssv1767179,nssv1767166,nssv1767187,nssv1767158,nssv1767219,nssv1767163,nssv1767207,nssv1767224,nssv1767240,nssv1767167,nssv1767183,nssv1767152,nssv1767212,nssv1767148,nssv1767173,nssv1767228,nssv1767217,nssv1767154,nssv1767223,nssv1767153,nssv1767215,nssv1767233,nssv1767172,nssv1767149,nssv1767241,nssv1767176,nssv1767213,nssv1767168,nssv1767182,nssv1767227,nssv1767194,nssv1767231,nssv1767186,nssv1767162,nssv1767242,nssv1767159,nssv1767200,nssv1767161,nssv1767202,nssv1767150,nssv1767177,nssv1767178,nssv1767243,nssv1767169,nssv1767201,nssv1767230,nssv1767218,nssv1767237,nssv1767206,nssv1767222,nssv1767180,nssv1767236,nssv1767210,nssv1767197,nssv1767192,nssv1767188,nssv1767239,nssv1767199,nssv1767220,nssv1767208,nssv1767189,nssv1767205,nssv1767193,nssv1767235,nssv1767204,nssv1767170,nssv1767203,nssv1767190,nssv1767181,nssv1767221,nssv1767184,nssv1767174 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945940 1 51488860 51492479 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767322,nssv1767951,nssv1767248,nssv1767302,nssv1767275,nssv1767301,nssv1767268,nssv1767276,nssv1767259,nssv1767278,nssv1767262,nssv1767313,nssv1767257,nssv1767281,nssv1767272,nssv1767306,nssv1767328,nssv1767284,nssv1767330,nssv1767314,nssv1767256,nssv1767287,nssv1767273,nssv1767320,nssv1767327,nssv1767288,nssv1767261,nssv1767311,nssv1767260,nssv1767319,nssv1767321,nssv1767271,nssv1767266,nssv1767292,nssv1767249,nssv1767296,nssv1767326,nssv1767950,nssv1767245,nssv1767318,nssv1767264,nssv1767956,nssv1767329,nssv1767267,nssv1767247,nssv1767309,nssv1767263,nssv1767308,nssv1767253,nssv1767282,nssv1767251,nssv1767953,nssv1767265,nssv1767290,nssv1767323,nssv1767949,nssv1767250,nssv1767293,nssv1767258,nssv1767955,nssv1767255,nssv1767317,nssv1767252,nssv1767244,nssv1767246,nssv1767948,nssv1767254,nssv1767304,nssv1767325,nssv1767280,nssv1767324,nssv1767286,nssv1767310,nssv1767316,nssv1767269,nssv1767297,nssv1767295,nssv1767300,nssv1767299,nssv1767331,nssv1767274,nssv1767954,nssv1767294,nssv1767312,nssv1767298,nssv1767289,nssv1767270,nssv1767303,nssv1767283,nssv1767291,nssv1767285,nssv1767315,nssv1767952,nssv1767277,nssv1767307,nssv1767305,nssv1767279 M 97 10 0 RNF11 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv473652 1 51583484 51583484 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011161 M 9 1 0 "" NA19129 esv3422673 1 51600290 51600354 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899010,essv8899008,essv8899009,essv8899007,essv8899006 M 185 5 0 EPS15 NA07346,NA12045,NA12144,NA12776,NA18964 esv3307818 1 51600291 51600292 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7757194,essv7740710,essv7761131,essv7742755,essv7749999 M 185 5 0 EPS15 NA07346,NA12045,NA12144,NA12776,NA18964 esv25434 1 51687865 51689975 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12448 M 40 0 3 EPS15 NA18523,NA19099,NA19129 nsv478230 1 51710805 51710805 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014943 M 9 1 0 EPS15 NA18507 esv3367601 1 51715652 51716750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692355 M 185 1 0 EPS15 NA19238 esv3308869 1 51747506 51747507 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836950,essv7838287,essv7838111 M 185 3 0 EPS15 NA12878,NA12891,NA19239 esv3363534 1 51747507 51747515 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674036,essv8674037 M 185 2 0 EPS15 NA19238,NA19240 nsv518552 1 51780741 51789301 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695995 M 2026 0 1 "" esv3893557 1 51796000 51807646 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25781074 M 3017 0 1 "" nsv159730 1 51798132 51802312 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178308 M 24 "" nsv945941 1 51938373 51947534 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767967,nssv1767957,nssv1768038,nssv1768010,nssv1767960,nssv1768027,nssv1767958,nssv1767993,nssv1767972,nssv1767992,nssv1767986,nssv1767994,nssv1767979,nssv1768033,nssv1768036,nssv1767980,nssv1768037,nssv1768048,nssv1768035,nssv1767999,nssv1767975,nssv1767997,nssv1767968,nssv1768017,nssv1767966,nssv1768028,nssv1767959,nssv1768014,nssv1768039,nssv1768019,nssv1767969,nssv1768046,nssv1767985,nssv1768020,nssv1767961,nssv1768007,nssv1767964,nssv1768004,nssv1767965,nssv1767990,nssv1767977,nssv1768053,nssv1767970,nssv1768024,nssv1767974,nssv1768032,nssv1767976,nssv1768052,nssv1768040,nssv1768050,nssv1768041,nssv1768001,nssv1767962,nssv1767989,nssv1767981,nssv1768047,nssv1767971,nssv1768013,nssv1767963,nssv1768023,nssv1767973,nssv1768021,nssv1768042,nssv1768049,nssv1768034,nssv1768002,nssv1767978,nssv1768030,nssv1768043,nssv1767982,nssv1767988,nssv1768012,nssv1768005,nssv1767998,nssv1768045,nssv1768031,nssv1768000,nssv1767995,nssv1768011,nssv1768044,nssv1768015,nssv1767983,nssv1768008,nssv1768003,nssv1768016,nssv1768026,nssv1768006,nssv1767991,nssv1768051,nssv1768025,nssv1768009,nssv1767987,nssv1767984,nssv1767996,nssv1768022,nssv1768018,nssv1768029 M 97 10 0 OSBPL9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1052378 1 51949752 51949752 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4148505 M 2 1 0 OSBPL9 HuRef nsv508193 1 51972748 51976382 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622763 M 4 0 1 OSBPL9 NA18994 esv1008107 1 52005251 52012166 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565406 M 3 0 1 OSBPL9 HuRef esv1546529 1 52042838 52042838 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3733512 M 2 1 0 NRD1 HuRef nsv519495 1 52066158 52070739 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696883 M 2026 0 1 NRD1 nsv829837 1 52078423 52187326 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446140,nssv1446085,nssv1446329,nssv1446162,nssv1446273,nssv1446229,nssv1446284,nssv1446362,nssv1446207,nssv1446296,nssv1446074,nssv1446173,nssv1446129,nssv1446218,nssv1446107,nssv1446307,nssv1446340,nssv1446185,nssv1446196,nssv1446351,nssv1446240,nssv1446251,nssv1446318,nssv1446096,nssv1446262,nssv1446151,nssv1446062,nssv1446118 M 95 0 28 NRD1,RAB3B esv2551965 1 52090335 52091077 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5337373 M 1 1 0 NRD1 NA18507 nsv512738 1 52090657 52090874 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625364 M 1 1 0 NRD1 1 esv3349028 1 52090794 52090816 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863696 M 185 1 0 NRD1 NA11992 esv1684865 1 52090816 52090816 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3851654 M 2 1 0 NRD1 HuRef esv2763304 1 52120937 52121441 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027869 M 1109 0 1 "" SW_1314 nsv843 1 52124383 52165274 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5554,nssv1136,nssv2131,nssv4189,nssv9125 M 9 5 0 RAB3B NA12156,NA12878,NA18555,NA19129,NA19240 nsv829848 1 52141199 52314287 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446462,nssv1446529,nssv1446451,nssv1446440,nssv1446384,nssv1446484,nssv1446518,nssv1446395,nssv1446429,nssv1446473,nssv1446373,nssv1446418,nssv1446495,nssv1446506,nssv1446540,nssv1446407 M 95 0 16 BTF3L4,KTI12,RAB3B,TXNDC12 nsv509246 1 52141242 52177538 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619794,nssv617994,nssv621095 M 4 3 0 RAB3B CHM,NA10860,NA15510 esv1010825 1 52145010 52147511 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565703 M 3 1 0 RAB3B HuRef nsv1001512 1 52202058 52254573 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480841 M 29084 1 0 RAB3B nsv945942 1 52217209 52223547 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768062,nssv1768093,nssv1768082,nssv1768107,nssv1768055,nssv1768123,nssv1768078,nssv1768091,nssv1768063,nssv1768080,nssv1768056,nssv1768112,nssv1768138,nssv1768144,nssv1768085,nssv1768124,nssv1768076,nssv1768115,nssv1768072,nssv1768147,nssv1768135,nssv1768126,nssv1768140,nssv1768098,nssv1768132,nssv1768148,nssv1768058,nssv1768103,nssv1768067,nssv1768121,nssv1768071,nssv1768106,nssv1768066,nssv1768084,nssv1768137,nssv1768119,nssv1768059,nssv1768130,nssv1768061,nssv1768088,nssv1768083,nssv1768114,nssv1768069,nssv1768141,nssv1768073,nssv1768081,nssv1768136,nssv1768086,nssv1768131,nssv1768090,nssv1768068,nssv1768094,nssv1768060,nssv1768054,nssv1768070,nssv1768122,nssv1768075,nssv1768143,nssv1768057,nssv1768129,nssv1768064,nssv1768077,nssv1768134,nssv1768099,nssv1768065,nssv1768104,nssv1768074,nssv1768127,nssv1768133,nssv1768125,nssv1768139,nssv1768105,nssv1768120,nssv1768101,nssv1768145,nssv1768117,nssv1768109,nssv1768150,nssv1768089,nssv1768110,nssv1768149,nssv1768096,nssv1768146,nssv1768079,nssv1768102,nssv1768092,nssv1768142,nssv1768118,nssv1768113,nssv1768111,nssv1768116,nssv1768087,nssv1768100,nssv1768108,nssv1768128,nssv1768097,nssv1768095 M 97 10 0 RAB3B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1693930 1 52222032 52222032 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3847906 M 2 1 0 RAB3B HuRef nsv475146 1 52223102 52223102 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013682 M 9 1 0 RAB3B NA19240 esv24521 1 52227625 52228590 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10185 M 40 0 1 RAB3B NA11995 dgv268n54 1 52227704 52228558 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546221,nsv546216,nsv546206 M 17421 15 6 RAB3B dgv269n54 1 52227704 52230404 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546229,nsv546218,nsv546207 M 17421 0 4 RAB3B dgv270n54 1 52227756 52228500 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546212,nsv546220,nsv546208,nsv546214,nsv546215,nsv546219,nsv546213 M 17421 0 17 RAB3B nsv546209 1 52227756 52228558 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712990,nssv712993,nssv712994,nssv712991,nssv712992 M 17421 5 0 RAB3B dgv271n54 1 52227756 52229747 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546225,nsv546228,nsv546217,nsv546210,nsv546222 M 17421 0 8 RAB3B nsv546211 1 52227808 52228276 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv712996 M 17421 0 1 RAB3B dgv272n54 1 52227963 52228558 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546223,nsv546224 M 17421 0 2 RAB3B nsv546226 1 52228066 52228558 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713037,nssv713038 M 17421 1 1 RAB3B nsv546227 1 52228121 52229374 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713040,nssv713039 M 17421 1 1 RAB3B nsv1004103 1 52268854 52325996 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701227 M 29084 0 1 BTF3L4,KTI12,TXNDC12 nsv945943 1 52321345 52321845 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767405,nssv1767392,nssv1767403,nssv1767354,nssv1767353,nssv1767397,nssv1768157,nssv1767366,nssv1768152,nssv1767386,nssv1767402,nssv1767411,nssv1767339,nssv1767414,nssv1767342,nssv1767413,nssv1767337,nssv1767372,nssv1767334,nssv1767400,nssv1767355,nssv1767380,nssv1767404,nssv1767381,nssv1767335,nssv1767365,nssv1767332,nssv1767417,nssv1767341,nssv1767378,nssv1767407,nssv1767368,nssv1767340,nssv1767377,nssv1767409,nssv1767367,nssv1767408,nssv1767369,nssv1767352,nssv1767385,nssv1768155,nssv1767391,nssv1767401,nssv1767387,nssv1768156,nssv1767419,nssv1768153,nssv1767382,nssv1767406,nssv1767363,nssv1767348,nssv1767398,nssv1767344,nssv1767399,nssv1767345,nssv1767416,nssv1767343,nssv1767361,nssv1767333,nssv1767358,nssv1767410,nssv1767383,nssv1768158,nssv1767347,nssv1768154,nssv1767351,nssv1767338,nssv1767373,nssv1767346,nssv1767412,nssv1767336,nssv1767388,nssv1767394,nssv1767393,nssv1767384,nssv1767390,nssv1767364,nssv1767357,nssv1767415,nssv1768151,nssv1767360,nssv1767370,nssv1767362,nssv1767396,nssv1767376,nssv1767371,nssv1767375,nssv1767350,nssv1767356,nssv1767420,nssv1767395,nssv1767379,nssv1767389,nssv1767418,nssv1767349,nssv1767359,nssv1767374 M 97 10 0 BTF3L4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945944 1 52325474 52326568 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767500,nssv1767446,nssv1767499,nssv1767496,nssv1767439,nssv1767491,nssv1767434,nssv1767486,nssv1767425,nssv1767490,nssv1767436,nssv1767494,nssv1767433,nssv1767492,nssv1767429,nssv1767456,nssv1767501,nssv1767457,nssv1767502,nssv1767468,nssv1767438,nssv1767473,nssv1767504,nssv1767475,nssv1767507,nssv1767472,nssv1767452,nssv1767477,nssv1767437,nssv1767464,nssv1767426,nssv1767458,nssv1767498,nssv1767466,nssv1767423,nssv1767480,nssv1767449,nssv1767483,nssv1767443,nssv1767515,nssv1767432,nssv1767510,nssv1767431,nssv1767488,nssv1767440,nssv1767463,nssv1767424,nssv1767478,nssv1767503,nssv1767479,nssv1767505,nssv1767454,nssv1767441,nssv1767460,nssv1767450,nssv1767484,nssv1767422,nssv1767471,nssv1767442,nssv1767451,nssv1767506,nssv1767462,nssv1767427,nssv1767465,nssv1767430,nssv1767469,nssv1767445,nssv1767517,nssv1767428,nssv1767495,nssv1767435,nssv1767516,nssv1767447,nssv1767482,nssv1767497,nssv1767448,nssv1767487,nssv1767513,nssv1767485,nssv1767512,nssv1767511,nssv1767509,nssv1767493,nssv1767455,nssv1767514,nssv1767470,nssv1767459,nssv1767421,nssv1767489,nssv1767474,nssv1767481,nssv1767444,nssv1767453,nssv1767467,nssv1767508,nssv1767461,nssv1767476 M 97 10 0 BTF3L4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv273n54 1 52375787 52382602 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546231,nsv546230 M 17421 3 0 ZFYVE9 esv25536 1 52380137 52380807 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12747 M 40 0 1 ZFYVE9 NA12489 nsv546232 1 52380165 52380753 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713050,nssv713049,nssv713047,nssv713048 M 17421 0 4 ZFYVE9 dgv274n54 1 52380165 52382602 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546233,nsv546236 M 17421 2 0 ZFYVE9 nsv546234 1 52380239 52380753 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713054,nssv713065,nssv713064,nssv713061,nssv713060,nssv713058,nssv713062,nssv713063,nssv713059,nssv713066,nssv713053,nssv713052,nssv713069,nssv713067,nssv713068,nssv713070,nssv713056,nssv713055,nssv713057 M 17421 19 0 ZFYVE9 nsv546235 1 52380239 52382602 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713073,nssv713072,nssv713071 M 17421 2 1 ZFYVE9 nsv546237 1 52380290 52389757 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713075 M 17421 1 0 ZFYVE9 nsv945945 1 52390673 52399412 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767597,nssv1767518,nssv1767529,nssv1767578,nssv1767596,nssv1767558,nssv1767536,nssv1767594,nssv1767531,nssv1767541,nssv1767520,nssv1767571,nssv1767530,nssv1767573,nssv1767532,nssv1767608,nssv1767522,nssv1767556,nssv1767524,nssv1767564,nssv1767540,nssv1767586,nssv1767527,nssv1767588,nssv1767598,nssv1767568,nssv1767599,nssv1767611,nssv1767535,nssv1767553,nssv1767595,nssv1767554,nssv1767601,nssv1767587,nssv1767542,nssv1767589,nssv1767523,nssv1767569,nssv1767526,nssv1767591,nssv1767519,nssv1767576,nssv1767547,nssv1767585,nssv1767533,nssv1767565,nssv1767603,nssv1767570,nssv1767549,nssv1767574,nssv1767521,nssv1767543,nssv1767528,nssv1767605,nssv1767537,nssv1767583,nssv1767546,nssv1767614,nssv1767604,nssv1767577,nssv1767539,nssv1767575,nssv1767525,nssv1767550,nssv1767534,nssv1767560,nssv1767538,nssv1767572,nssv1767600,nssv1767580,nssv1767602,nssv1767582,nssv1767581,nssv1767607,nssv1767592,nssv1767612,nssv1767613,nssv1767609,nssv1767551,nssv1767557,nssv1767548,nssv1767566,nssv1767579,nssv1767559,nssv1767593,nssv1767563,nssv1767544,nssv1767610,nssv1767562,nssv1767552,nssv1767561,nssv1767606,nssv1767590,nssv1767584,nssv1767567,nssv1767555,nssv1767545 M 97 10 0 ZFYVE9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv855 1 52393779 52426134 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5571 M 9 1 0 ZFYVE9 NA19129 nsv945946 1 52408189 52421138 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768314,nssv1768273,nssv1767618,nssv1768302,nssv1768310,nssv1768326,nssv1767630,nssv1768258,nssv1767633,nssv1768304,nssv1767628,nssv1768281,nssv1768260,nssv1768286,nssv1768309,nssv1768324,nssv1767617,nssv1768319,nssv1767619,nssv1768323,nssv1767624,nssv1768327,nssv1768316,nssv1768277,nssv1768311,nssv1768279,nssv1767623,nssv1768264,nssv1767629,nssv1768285,nssv1768315,nssv1768318,nssv1767632,nssv1767638,nssv1768313,nssv1768289,nssv1768259,nssv1768272,nssv1768312,nssv1768299,nssv1767631,nssv1768305,nssv1767620,nssv1768288,nssv1767622,nssv1768256,nssv1767637,nssv1768293,nssv1768317,nssv1768269,nssv1767639,nssv1767615,nssv1767634,nssv1768292,nssv1768262,nssv1768322,nssv1767626,nssv1768276,nssv1767636,nssv1768306,nssv1767616,nssv1768307,nssv1768308,nssv1768287,nssv1767635,nssv1768296,nssv1767627,nssv1768294,nssv1767625,nssv1768303,nssv1767621,nssv1768270,nssv1768278,nssv1768274,nssv1768301,nssv1768295,nssv1768282,nssv1768280,nssv1768257,nssv1768284,nssv1768283,nssv1768321,nssv1768297,nssv1768298,nssv1768265,nssv1768268,nssv1768275,nssv1768271,nssv1768263,nssv1768325,nssv1768291,nssv1768300,nssv1768267,nssv1768290,nssv1768261,nssv1768266,nssv1768320 M 97 10 0 ZFYVE9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546238 1 52471295 52479737 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713076 M 17421 0 1 ZFYVE9 nsv819763 1 52501757 52502158 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418936 M 2 1 0 ZFYVE9 AK1 nsv822553 1 52521020 52523353 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428022 M 31 0 1 ZFYVE9 AK10 esv1012300 1 52569790 52570083 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4325530 M 2 0 1 ZFYVE9 HuRef nsv472181 1 52629567 52629567 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017936 M 9 1 0 ORC1 NA18555 esv988243 1 52780175 52781999 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565052 M 3 1 0 ZCCHC11 HuRef nsv527810 1 52829185 52831694 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704304 M 2026 0 1 "" nsv1001535 1 52858628 53584799 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480862 M 29084 1 0 C1orf123,CPT2,ECHDC2,FAM159A,LOC100507564,LRP8,MAGOH,PODN,SCP2,SELRC1,SLC1A7,ZYG11A,ZYG11B esv1918082 1 52876376 52876796 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4618488 M 1 0 1 FAM159A NA18507 esv2758934 1 52898603 53061769 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757731 M 270 0 1 SELRC1,ZYG11B NA18951 nsv829859 1 52961730 53163533 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446562,nssv1446584,nssv1446551,nssv1446573 M 95 0 4 ECHDC2,ZYG11A,ZYG11B nsv1000097 1 52982030 53047284 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464044 M 29084 1 0 ZYG11B esv3381752 1 52991686 52991699 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863698 M 185 1 0 ZYG11B NA12005 nsv945948 1 53010505 53013138 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768339,nssv1768328,nssv1768410,nssv1768373,nssv1768408,nssv1768399,nssv1768348,nssv1768421,nssv1768356,nssv1768362,nssv1768342,nssv1768358,nssv1768336,nssv1768360,nssv1768329,nssv1768379,nssv1768330,nssv1768392,nssv1768407,nssv1768383,nssv1768346,nssv1768388,nssv1768406,nssv1768363,nssv1768350,nssv1768417,nssv1768352,nssv1768393,nssv1768331,nssv1768375,nssv1768412,nssv1768368,nssv1768332,nssv1768371,nssv1768337,nssv1768401,nssv1768413,nssv1768351,nssv1768340,nssv1768364,nssv1768345,nssv1768374,nssv1768411,nssv1768365,nssv1768333,nssv1768382,nssv1768409,nssv1768424,nssv1768344,nssv1768391,nssv1768341,nssv1768416,nssv1768334,nssv1768378,nssv1768357,nssv1768423,nssv1768338,nssv1768381,nssv1768347,nssv1768386,nssv1768335,nssv1768355,nssv1768343,nssv1768420,nssv1768349,nssv1768377,nssv1768359,nssv1768369,nssv1768405,nssv1768370,nssv1768414,nssv1768384,nssv1768397,nssv1768415,nssv1768419,nssv1768366,nssv1768361,nssv1768376,nssv1768390,nssv1768403,nssv1768422,nssv1768402,nssv1768385,nssv1768353,nssv1768418,nssv1768396,nssv1768387,nssv1768367,nssv1768398,nssv1768389,nssv1768404,nssv1768400,nssv1768395,nssv1768380,nssv1768394,nssv1768372,nssv1768354 M 97 10 0 ZYG11B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1751396 1 53022162 53022162 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4256136 M 2 1 0 ZYG11B HuRef nsv866 1 53045555 53083696 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9134 M 9 0 1 ZYG11A,ZYG11B NA12156 esv6479 1 53064963 53065165 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28920 M 1 0 0 ZYG11B esv24261 1 53128283 53130141 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10399 M 40 0 1 ZYG11A NA18517 nsv945950 1 53158020 53159024 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767697,nssv1767678,nssv1767692,nssv1767679,nssv1768445,nssv1767649,nssv1768441,nssv1767662,nssv1768450,nssv1767685,nssv1768454,nssv1767650,nssv1767642,nssv1767645,nssv1767691,nssv1767668,nssv1768440,nssv1767672,nssv1768449,nssv1767663,nssv1768457,nssv1767673,nssv1767698,nssv1767707,nssv1767699,nssv1768439,nssv1768442,nssv1767653,nssv1768443,nssv1768465,nssv1768453,nssv1767648,nssv1767696,nssv1767689,nssv1768461,nssv1767683,nssv1768458,nssv1767666,nssv1768456,nssv1767703,nssv1768463,nssv1767686,nssv1768451,nssv1767704,nssv1768444,nssv1767701,nssv1768448,nssv1767700,nssv1767690,nssv1767646,nssv1767694,nssv1767640,nssv1768455,nssv1767671,nssv1768452,nssv1767665,nssv1768447,nssv1767682,nssv1767641,nssv1767659,nssv1768459,nssv1767684,nssv1767644,nssv1767706,nssv1767693,nssv1767667,nssv1768460,nssv1767669,nssv1768446,nssv1768462,nssv1767695,nssv1767680,nssv1767651,nssv1767702,nssv1767675,nssv1767681,nssv1767670,nssv1767652,nssv1767677,nssv1767674,nssv1767708,nssv1767676,nssv1767661,nssv1767655,nssv1767643,nssv1767705,nssv1767654,nssv1767660,nssv1767647,nssv1767709,nssv1767688,nssv1767687,nssv1767657,nssv1767658,nssv1768464,nssv1767656,nssv1767664 M 97 10 0 ECHDC2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1010121 1 53178255 53372938 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469723 M 29084 1 0 PODN,SCP2,SLC1A7 nsv945951 1 53180688 53182177 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767795,nssv1767775,nssv1767722,nssv1767761,nssv1767789,nssv1767804,nssv1767788,nssv1767751,nssv1767724,nssv1767747,nssv1767717,nssv1767802,nssv1767728,nssv1767785,nssv1767741,nssv1767758,nssv1767725,nssv1767767,nssv1767723,nssv1767776,nssv1767796,nssv1767740,nssv1767730,nssv1767763,nssv1767714,nssv1767756,nssv1767719,nssv1767749,nssv1767716,nssv1767743,nssv1767727,nssv1767770,nssv1767726,nssv1767782,nssv1767715,nssv1767737,nssv1767793,nssv1767754,nssv1767739,nssv1767798,nssv1767790,nssv1767753,nssv1767712,nssv1767765,nssv1767713,nssv1767769,nssv1767734,nssv1767778,nssv1767732,nssv1767759,nssv1767787,nssv1767742,nssv1767729,nssv1767744,nssv1767718,nssv1767746,nssv1767792,nssv1767784,nssv1767794,nssv1767777,nssv1767721,nssv1767752,nssv1767731,nssv1767768,nssv1767738,nssv1767801,nssv1767791,nssv1767733,nssv1767711,nssv1767755,nssv1767720,nssv1767760,nssv1767745,nssv1767774,nssv1767797,nssv1767736,nssv1767750,nssv1767780,nssv1767800,nssv1767783,nssv1767766,nssv1767781,nssv1767779,nssv1767735,nssv1767772,nssv1767748,nssv1767710,nssv1767803,nssv1767799,nssv1767771,nssv1767805,nssv1767786,nssv1767757,nssv1767806,nssv1767764,nssv1767762,nssv1767773 M 97 10 0 SCP2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv478841 1 53181895 53181895 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015639 M 9 1 0 SCP2 NA18507 nsv945952 1 53230231 53231231 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767829,nssv1767850,nssv1767824,nssv1767832,nssv1767884,nssv1767864,nssv1767823,nssv1767857,nssv1767879,nssv1767854,nssv1767825,nssv1767863,nssv1767878,nssv1767852,nssv1767815,nssv1767849,nssv1767882,nssv1767859,nssv1767811,nssv1767845,nssv1767818,nssv1767834,nssv1767831,nssv1767833,nssv1767814,nssv1767848,nssv1767886,nssv1767869,nssv1767881,nssv1767876,nssv1767822,nssv1767861,nssv1767883,nssv1767871,nssv1767826,nssv1767873,nssv1767816,nssv1767837,nssv1767880,nssv1767868,nssv1767812,nssv1767855,nssv1767838,nssv1767862,nssv1767821,nssv1767866,nssv1767809,nssv1767853,nssv1767885,nssv1767851,nssv1767877,nssv1767860,nssv1767817,nssv1767875,nssv1767813,nssv1767856,nssv1767810,nssv1767841,nssv1767828,nssv1767846,nssv1767808,nssv1767858,nssv1767836,nssv1767839,nssv1767835,nssv1767870,nssv1767819,nssv1767865,nssv1767820,nssv1767867,nssv1767827,nssv1767843,nssv1767844,nssv1767874,nssv1767830,nssv1767842,nssv1767840,nssv1767872,nssv1767847,nssv1767807 M 97 10 0 SCP2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945953 1 53233082 53234188 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1767888,nssv1768572,nssv1767909,nssv1767920,nssv1767896,nssv1767941,nssv1767894,nssv1768570,nssv1767899,nssv1767924,nssv1768582,nssv1767927,nssv1767903,nssv1767928,nssv1768581,nssv1768569,nssv1767907,nssv1768573,nssv1768589,nssv1767934,nssv1767891,nssv1768575,nssv1767890,nssv1767944,nssv1767895,nssv1767887,nssv1767916,nssv1768597,nssv1767900,nssv1768579,nssv1767904,nssv1767937,nssv1768583,nssv1767939,nssv1767892,nssv1768596,nssv1767918,nssv1768568,nssv1768586,nssv1767912,nssv1767898,nssv1767938,nssv1767902,nssv1768593,nssv1767905,nssv1768592,nssv1768580,nssv1767917,nssv1767897,nssv1768577,nssv1767906,nssv1767942,nssv1767911,nssv1767930,nssv1768587,nssv1767943,nssv1768585,nssv1767935,nssv1767893,nssv1767913,nssv1767908,nssv1767925,nssv1768584,nssv1767932,nssv1767901,nssv1768567,nssv1767915,nssv1767933,nssv1767889,nssv1768578,nssv1768588,nssv1767936,nssv1768566,nssv1768576,nssv1768574,nssv1767940,nssv1768591,nssv1767931,nssv1767946,nssv1767947,nssv1767945,nssv1768595,nssv1767914,nssv1768590,nssv1767919,nssv1768599,nssv1768598,nssv1767926,nssv1768564,nssv1767922,nssv1768571,nssv1767929,nssv1767921,nssv1767910,nssv1767923,nssv1768565,nssv1768594 M 97 10 0 SCP2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv10150 1 53256062 53261150 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19433 M 31 1 0 SCP2 NA18972 esv2764252 1 53260458 53267467 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005377,essv7005379,essv7005386,essv7005388,essv7005380,essv7005383,essv7005382,essv7005385,essv7005384,essv7005381,essv7005387 M 1109 0 11 SCP2 RW_0020,RW_0021,RW_0049,RW_0059,RW_0110,RW_0137,RW_0147,RW_0505,RW_0540,RW_0541,RW_0571 nsv441693 1 53261038 53262328 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656660,nssv1656661,nssv1656656,nssv1656662,nssv1656658,nssv1656663,nssv1656659,nssv1656657 M 270 0 8 SCP2 NA18855,NA18861,NA18871,NA19099,NA19101,NA19128,NA19129,NA19205 esv2758935 1 53261152 53304705 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756843 M 270 0 2 PODN,SCP2 NA18853,NA19128 nsv514927 1 53261728 53262316 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2861797,nssv2860888,nssv2861885,nssv2860209,nssv2862839,nssv2860036,nssv2867116,nssv2862532,nssv2861863,nssv2863758,nssv2863334,nssv2863777,nssv2862700,nssv2859785,nssv2862663,nssv2859760,nssv2861724,nssv2866000,nssv2865264,nssv2861915,nssv2859973,nssv2859935,nssv2859833,nssv2868434,nssv2868011,nssv2863854,nssv2861112,nssv2862643,nssv2860719,nssv2865703,nssv2866157,nssv2863222,nssv2865943,nssv2859536,nssv2868468,nssv2866232,nssv2862627,nssv2864031,nssv2863468,nssv2866446,nssv2861294,nssv2866607,nssv2859679,nssv2860345,nssv2860040,nssv2861402,nssv2865442,nssv2864609,nssv2866924,nssv2860380,nssv2868359,nssv2861084,nssv2866785,nssv2861747,nssv2859372,nssv2864106,nssv2863268,nssv2867326,nssv2862676,nssv2864781,nssv2861719,nssv2866905,nssv2862682,nssv2861141,nssv2863638,nssv2864676,nssv2859956,nssv2865248,nssv2862882,nssv2863612,nssv2867523,nssv2863871,nssv2866830,nssv2860092,nssv2863938,nssv2865337,nssv2859520,nssv2860135,nssv2865238,nssv2864042,nssv2863255,nssv2861082,nssv2865023,nssv2862845,nssv2862582,nssv2863110,nssv2860857,nssv2859846,nssv2867628,nssv2864286,nssv2866500,nssv2862061,nssv2865268,nssv2865378,nssv2862821,nssv2861981,nssv2859212,nssv2864876,nssv2863780,nssv2863404,nssv2861096,nssv2864193,nssv2862172,nssv2866408,nssv2864176,nssv2859143,nssv2860413,nssv2865379,nssv2868377,nssv2860045,nssv2864924,nssv2868313,nssv2861227,nssv2867380,nssv2867691,nssv2864323,nssv2861108,nssv2865163,nssv2865283,nssv2863604,nssv2866366,nssv2860922,nssv2860123,nssv2862329,nssv2864399,nssv2858868,nssv2862662,nssv2868281,nssv2860634,nssv2859480,nssv2867217,nssv2865797,nssv2866796,nssv2868403,nssv2859483,nssv2861646,nssv2860158,nssv2865412,nssv2859591,nssv2866028,nssv2860713,nssv2858685,nssv2864694,nssv2863084,nssv2861672,nssv2862645,nssv2859636,nssv2861715,nssv2865912,nssv2861824,nssv2866155,nssv2858567,nssv2861153,nssv2863996,nssv2866643,nssv2859111,nssv2864038,nssv2864590,nssv2860569,nssv2863991,nssv2863281,nssv2864795,nssv2862891,nssv2866829,nssv2866521,nssv2867404,nssv2863909,nssv2864435,nssv2868142,nssv2862858,nssv2859704,nssv2868067,nssv2862086,nssv2865798,nssv2860619,nssv2862173,nssv2859972,nssv2860539,nssv2866811,nssv2868312,nssv2861604,nssv2861469,nssv2866499,nssv2867017,nssv2864370,nssv2858639,nssv2868130,nssv2858630,nssv2864756,nssv2863081,nssv2859443,nssv2865825,nssv2865721,nssv2866495,nssv2860467,nssv2863942,nssv2863959,nssv2865845,nssv2867718,nssv2864739,nssv2866524,nssv2862162,nssv2865342,nssv2862271,nssv2862528,nssv2865850,nssv2863647,nssv2860648,nssv2866592,nssv2860311,nssv2865105,nssv2861475,nssv2859859,nssv2866125,nssv2867908,nssv2863914,nssv2865083,nssv2867669,nssv2863132,nssv2863325,nssv2864802,nssv2860164,nssv2867016,nssv2859386,nssv2861457,nssv2867272,nssv2862865,nssv2860232,nssv2861431,nssv2863127,nssv2867573,nssv2858674,nssv2867710,nssv2865535,nssv2867394,nssv2868319,nssv2866400,nssv2866358,nssv2863878,nssv2862822,nssv2864711,nssv2868125,nssv2862612,nssv2867312,nssv2864944,nssv2858953,nssv2859494,nssv2859146,nssv2860147,nssv2859719,nssv2867839,nssv2867711,nssv2867832,nssv2865976,nssv2866248,nssv2859233,nssv2862712,nssv2863368,nssv2864575,nssv2865445,nssv2861366,nssv2866845,nssv2860956,nssv2865049,nssv2864669,nssv2867954,nssv2864686,nssv2865115,nssv2860054,nssv2864172,nssv2865143,nssv2859385,nssv2865518,nssv2868010,nssv2863319,nssv2864658,nssv2864497,nssv2867211,nssv2865759,nssv2862846,nssv2861991,nssv2860394,nssv2858558,nssv2863494,nssv2863664,nssv2860282,nssv2860848,nssv2861795,nssv2867825,nssv2864481,nssv2860168,nssv2862945,nssv2865662,nssv2867280,nssv2861496,nssv2866531,nssv2860125,nssv2858713,nssv2861645,nssv2863790,nssv2863218,nssv2862644,nssv2866239,nssv2858952,nssv2861204,nssv2860409,nssv2858580,nssv2862615,nssv2864459,nssv2867041,nssv2864186,nssv2860098,nssv2864315,nssv2866695,nssv2863811,nssv2868165,nssv2863924,nssv2860070,nssv2861238,nssv2864587,nssv2864591,nssv2863908,nssv2866432,nssv2863571,nssv2866374,nssv2863684,nssv2860393,nssv2868446,nssv2860302,nssv2863333,nssv2868263,nssv2864592,nssv2866733,nssv2865038,nssv2865226,nssv2867141,nssv2859641,nssv2863971,nssv2868317,nssv2866156,nssv2860643,nssv2863535,nssv2864710,nssv2861343,nssv2865760,nssv2863861,nssv2862952,nssv2860886,nssv2859700,nssv2862466,nssv2859382,nssv2858757,nssv2867807,nssv2867066,nssv2865172,nssv2862857,nssv2867244,nssv2865350,nssv2868082,nssv2860909,nssv2868322,nssv2866047,nssv2858958,nssv2867085,nssv2861193,nssv2859181,nssv2858566,nssv2865210,nssv2867780,nssv2867379,nssv2865310,nssv2863785,nssv2863308,nssv2860746,nssv2866621,nssv2863900,nssv2866261,nssv2866772,nssv2860607,nssv2860647,nssv2860060,nssv2866758,nssv2859509,nssv2865297,nssv2860141,nssv2862611,nssv2858852,nssv2865962,nssv2868241,nssv2865969,nssv2859524,nssv2860055,nssv2860803,nssv2865886,nssv2863598,nssv2865525,nssv2867347,nssv2864451,nssv2859423,nssv2868258,nssv2860843,nssv2868449,nssv2859216,nssv2860560,nssv2864264,nssv2858502,nssv2863179,nssv2861407,nssv2863537,nssv2859288,nssv2861979,nssv2866367,nssv2863757,nssv2865380,nssv2860432,nssv2866704,nssv2861878,nssv2865604,nssv2860796,nssv2863355,nssv2865329,nssv2860618,nssv2864214,nssv2863256,nssv2863489,nssv2861027,nssv2864177,nssv2862128,nssv2865367,nssv2861768,nssv2865799,nssv2864324,nssv2859147,nssv2861198,nssv2867322,nssv2861823,nssv2860281,nssv2864846,nssv2860351,nssv2867160,nssv2867045,nssv2867845,nssv2860039,nssv2861462,nssv2859767,nssv2863077,nssv2862969,nssv2864699,nssv2859247,nssv2864539,nssv2865780,nssv2865395,nssv2861205,nssv2863872,nssv2861180,nssv2859683,nssv2865544,nssv2868172,nssv2866043,nssv2859203,nssv2858663,nssv2860478,nssv2861796,nssv2860523,nssv2867057,nssv2858874,nssv2865695,nssv2860330,nssv2865063,nssv2863116,nssv2866292,nssv2863345,nssv2868437,nssv2865360,nssv2868126,nssv2864201,nssv2864039,nssv2859047,nssv2864551,nssv2864645,nssv2861841,nssv2862838,nssv2861632,nssv2864996,nssv2866713,nssv2867953,nssv2862576,nssv2858840 M 2366 488 0 SCP2 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 dgv36n67 1 53266620 53268167 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822564,nsv822575 M 31 0 2 SCP2 AK16,AK2 nsv522862 1 53276999 53340309 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698517 M 2026 0 1 PODN,SCP2,SLC1A7 esv24212 1 53291827 53292484 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14289 M 40 0 1 "" NA18505 nsv516780 1 53292714 53340309 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv672612,nssv675520,nssv692841,nssv703091,nssv660861,nssv686801,nssv687629,nssv700439,nssv701768,nssv660166,nssv670772 M 2026 1 10 PODN,SLC1A7 nsv818167 1 53308066 53315381 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417740 M 112 0 1 PODN NA19003 nsv945954 1 53309713 53311741 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768677,nssv1768693,nssv1768608,nssv1768692,nssv1768609,nssv1768661,nssv1768678,nssv1768687,nssv1768601,nssv1768688,nssv1768618,nssv1768636,nssv1768679,nssv1768648,nssv1768615,nssv1768650,nssv1768602,nssv1768675,nssv1768617,nssv1768640,nssv1768606,nssv1768659,nssv1768604,nssv1768657,nssv1768611,nssv1768666,nssv1768683,nssv1768662,nssv1768624,nssv1768643,nssv1768605,nssv1768623,nssv1768629,nssv1768674,nssv1768613,nssv1768635,nssv1768603,nssv1768646,nssv1768622,nssv1768676,nssv1768620,nssv1768654,nssv1768616,nssv1768667,nssv1768612,nssv1768669,nssv1768686,nssv1768625,nssv1768619,nssv1768672,nssv1768631,nssv1768655,nssv1768614,nssv1768633,nssv1768684,nssv1768694,nssv1768607,nssv1768670,nssv1768621,nssv1768641,nssv1768680,nssv1768653,nssv1768628,nssv1768689,nssv1768682,nssv1768651,nssv1768681,nssv1768630,nssv1768610,nssv1768668,nssv1768685,nssv1768626,nssv1768600,nssv1768645,nssv1768690,nssv1768634,nssv1768644,nssv1768638,nssv1768691,nssv1768649,nssv1768642,nssv1768673,nssv1768637,nssv1768660,nssv1768652,nssv1768671,nssv1768658,nssv1768664,nssv1768639,nssv1768627,nssv1768663,nssv1768665,nssv1768696,nssv1768695,nssv1768647,nssv1768632,nssv1768656 M 97 10 0 PODN HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546239 1 53316877 53326290 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713077 M 17421 0 1 PODN,SLC1A7 nsv1003159 1 53317840 53355772 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468539 M 29084 1 0 PODN,SLC1A7 nsv546240 1 53322775 53372666 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713078 M 17421 0 1 PODN,SLC1A7 dgv88e59 1 53332752 53340350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3443519,esv3387342 M 185 2 0 SLC1A7 NA19239,NA19240 esv21434 1 53333228 53341502 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15060 M 40 2 1 SLC1A7 NA06985,NA12044,NA19114 nsv822587 1 53334248 53339846 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436336 M 31 1 0 SLC1A7 NA18542 esv2306191 1 53335520 53335888 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4820247 M 1 0 1 SLC1A7 NA18507 esv3329716 1 53336052 53339350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692362 M 185 1 0 SLC1A7 NA19238 esv998975 1 53337495 53337495 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578735 M 3 1 0 SLC1A7 HuRef nsv160120 1 53337524 53337524 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178698 M 24 SLC1A7 nsv546241 1 53364051 53368090 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713079 M 17421 0 1 SLC1A7 nsv822598 1 53366578 53368169 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423452,nssv1439456 M 31 0 2 SLC1A7 NA18537,NA18968 dgv275n54 1 53366758 53368092 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546243,nsv546250,nsv546253,nsv546244,nsv546254,nsv546251,nsv546242,nsv546246,nsv546252,nsv546247 M 17421 0 121 SLC1A7 dgv276n54 1 53366758 53372666 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546255,nsv546245 M 17421 0 2 SLC1A7 esv26895 1 53366780 53368162 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13636 M 40 0 5 SLC1A7 NA11894,NA11931,NA12044,NA12749,NA12828 dgv277n54 1 53366913 53367915 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546248,nsv546249 M 17421 0 2 SLC1A7 nsv546256 1 53366964 53378472 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713205 M 17421 0 1 SLC1A7 nsv1010473 1 53378472 53427130 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701228 M 29084 0 1 SLC1A7 nsv526458 1 53401150 53401403 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702761 M 2026 1 0 "" nsv520450 1 53401403 53403119 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv671581,nssv684433,nssv680733 M 2026 3 0 "" esv2422213 1 53418151 53497027 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161539 M 181 1 0 C1orf123,CPT2,LOC100507564,LRP8,MAGOH ND01562 nsv829871 1 53439131 53621308 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446595 M 95 0 1 C1orf123,CPT2,LOC100507564,LRP8,MAGOH nsv1011750 1 53465241 53499762 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471775 M 29084 1 0 LOC100507564,LRP8,MAGOH nsv509258 1 53498099 53524215 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619795 M 4 1 0 LRP8 NA10860 dgv89e59 1 53521652 53522550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3402316,esv3395734 M 185 2 0 LRP8 NA19239,NA19240 dgv165n100 1 53529330 53623753 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011078,nsv1006660 M 29084 3 0 LRP8 nsv461483 1 53531660 53614687 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537868 M 1557 1 0 LRP8 NINDS_15 nsv546257 1 53531660 53614687 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173847 M 17421 1 0 LRP8 NINDS_15 nsv509269 1 53534896 53821357 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619797,nssv619798,nssv619800,nssv619799 M 4 1 0 DMRTB1,GLIS1,LRP8,SLC25A3P1 NA10860 esv21984 1 53565853 53566605 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19147 M 40 0 1 LRP8 NA12489 nsv159942 1 53591521 53592861 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178520 M 24 "" nsv877 1 53688166 53721492 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9140 M 9 1 0 DMRTB1 NA12156 nsv829882 1 53688253 53868201 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446606,nssv1446617 M 95 0 2 DMRTB1,GLIS1 esv2758936 1 53691140 53801824 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757732 M 270 0 20 DMRTB1,GLIS1 NA07348,NA10830,NA10838,NA12234,NA12248,NA12814,NA18500,NA18545,NA18558,NA18571,NA18636,NA18853,NA18854,NA18872,NA18912,NA18949,NA18970,NA18995,NA19192,NA19205 nsv428443 1 53691140 53801824 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450243,nssv450254 M 62 2 0 DMRTB1,GLIS1 HGDP00476,HGDP01093 dgv37n67 1 53705955 53706519 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822609,nsv822620 M 31 2 0 "" NA18526,NA18968 nsv888 1 53709793 53746882 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6602 M 9 0 1 GLIS1 NA12156 nsv527806 1 53737654 53748776 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704300 M 2026 0 1 GLIS1 esv26850 1 53740342 53741342 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18493 M 40 1 0 "" NA06985 nsv522165 1 53744637 53777648 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694938 M 2026 0 1 GLIS1 nsv512739 1 53763703 53763787 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625366 M 1 1 0 GLIS1 1 nsv10162 1 53772851 53775276 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv13430 M 31 0 1 GLIS1 NA18853 nsv1011262 1 53781217 54344565 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701231 M 29084 1 0 DIO1,GLIS1,HSPB11,LDLRAD1,LRRC42,MIR4781,NDC1,TCEANC2,TMEM59,YIPF1 esv3394793 1 53793852 53795650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692371 M 185 1 0 GLIS1 NA19240 nsv899 1 53812744 53848076 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4208 M 9 1 0 GLIS1 NA12878 nsv509280 1 53878256 53947541 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619801 M 4 1 0 GLIS1 NA10860 nsv461494 1 53899292 53934133 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537879 M 1557 0 1 GLIS1 HGDP01290 nsv546258 1 53899292 53934133 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173848 M 17421 0 1 GLIS1 HGDP01290 nsv478320 1 53908871 53908871 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019658 M 9 1 0 GLIS1 NA18507 nsv474645 1 53918908 53918908 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020273 M 9 1 0 GLIS1 NA18956 nsv461506 1 53925291 53962256 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537890 M 1557 0 1 GLIS1 HGDP00515 nsv546259 1 53925291 53962256 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173849 M 17421 0 1 GLIS1 HGDP00515 nsv473585 1 53941291 53941291 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018385 M 9 1 0 GLIS1 NA19129 esv2313944 1 53947446 53947852 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4934662 M 1 0 1 GLIS1 NA18507 esv1769487 1 53951543 53951543 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3777080 M 2 1 0 GLIS1 HuRef esv27981 1 54124016 54126041 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17017 M 40 0 1 YIPF1 NA19099 esv22788 1 54140226 54142306 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10550 M 40 0 3 DIO1 NA18517,NA18916,NA19257 nsv516392 1 54140841 54142318 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv691801,nssv668000,nssv663460,nssv686306,nssv671284,nssv677077,nssv679576,nssv662307 M 2026 0 8 DIO1 esv27044 1 54184876 54185589 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17330 M 40 0 1 LRRC42 NA12006 nsv546260 1 54184903 54185369 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713206,nssv713207 M 17421 1 1 LRRC42 nsv546261 1 54184903 54185523 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713209,nssv713208,nssv713210 M 17421 3 0 LRRC42 nsv546262 1 54184955 54186010 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713211 M 17421 0 1 LRRC42 nsv546263 1 54186010 54206280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713212 M 17421 0 1 LRRC42 esv275008 1 54207186 54220665 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585314 M 1250 0 1 "" nsv945956 1 54211502 54214531 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768749,nssv1766720,nssv1768726,nssv1766723,nssv1768743,nssv1768703,nssv1768763,nssv1768712,nssv1766733,nssv1768710,nssv1768752,nssv1768718,nssv1768773,nssv1766719,nssv1768765,nssv1768707,nssv1768732,nssv1768701,nssv1768771,nssv1768711,nssv1768769,nssv1766722,nssv1768760,nssv1766725,nssv1766735,nssv1768715,nssv1768770,nssv1768704,nssv1768756,nssv1766724,nssv1766732,nssv1768717,nssv1766734,nssv1768705,nssv1768753,nssv1766728,nssv1768740,nssv1768708,nssv1768766,nssv1768720,nssv1768761,nssv1768716,nssv1768739,nssv1768722,nssv1766736,nssv1766726,nssv1768727,nssv1768719,nssv1768735,nssv1768724,nssv1768747,nssv1766721,nssv1768737,nssv1768713,nssv1768759,nssv1766727,nssv1768762,nssv1768706,nssv1768767,nssv1768731,nssv1768750,nssv1768729,nssv1768733,nssv1768714,nssv1768768,nssv1768702,nssv1768746,nssv1768721,nssv1768757,nssv1768728,nssv1768755,nssv1768709,nssv1768754,nssv1768748,nssv1766716,nssv1766718,nssv1768736,nssv1766731,nssv1766738,nssv1768734,nssv1768725,nssv1766737,nssv1768744,nssv1768751,nssv1768741,nssv1768772,nssv1768723,nssv1768700,nssv1766717,nssv1766730,nssv1768738,nssv1766729,nssv1768745,nssv1768742,nssv1768764,nssv1768758,nssv1768730 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1003904 1 54230215 54291746 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467066 M 29084 1 0 LDLRAD1,TMEM59 nsv475372 1 54278209 54278209 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020034 M 9 1 0 TMEM59 NA19240 nsv477511 1 54283153 54283153 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011690 M 9 1 0 TMEM59 NA18517 nsv475184 1 54317681 54317681 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016575 M 9 1 0 TCEANC2 NA19240 nsv945957 1 54328096 54328710 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766754,nssv1766827,nssv1766817,nssv1766790,nssv1766820,nssv1766797,nssv1766770,nssv1766805,nssv1766763,nssv1766788,nssv1766821,nssv1766808,nssv1766757,nssv1766801,nssv1766748,nssv1766807,nssv1766743,nssv1766739,nssv1766816,nssv1766809,nssv1766825,nssv1766812,nssv1766742,nssv1766832,nssv1766759,nssv1766798,nssv1766761,nssv1766794,nssv1766822,nssv1766792,nssv1766755,nssv1766775,nssv1766756,nssv1766777,nssv1766740,nssv1766795,nssv1766745,nssv1766766,nssv1766767,nssv1766779,nssv1766744,nssv1766829,nssv1766747,nssv1766785,nssv1766746,nssv1766772,nssv1766750,nssv1766799,nssv1766824,nssv1766813,nssv1766751,nssv1766811,nssv1766760,nssv1766780,nssv1766741,nssv1766784,nssv1766749,nssv1766771,nssv1766758,nssv1766796,nssv1766752,nssv1766806,nssv1766818,nssv1766769,nssv1766819,nssv1766835,nssv1766823,nssv1766778,nssv1766768,nssv1766764,nssv1766753,nssv1766830,nssv1766826,nssv1766789,nssv1766800,nssv1766793,nssv1766833,nssv1766815,nssv1766781,nssv1766787,nssv1766782,nssv1766765,nssv1766774,nssv1766810,nssv1766802,nssv1766803,nssv1766773,nssv1766786,nssv1766834,nssv1766828,nssv1766804,nssv1766762,nssv1766791,nssv1766776,nssv1766831,nssv1766783,nssv1766814 M 97 10 0 TCEANC2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv17n27 1 54350989 54363910 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv461528,nsv461517 M 1557 2 0 "" 1780854105_A,1780854558_A nsv470712 1 54350989 54363910 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547730 M 443 1 0 "" HGDP00578 nsv546264 1 54350989 54363910 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173851,nssv1173850 M 17421 2 0 "" 1780854105_A,1780854558_A nsv461539 1 54356866 54370863 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537919 M 1557 0 1 "" 1780862412_A nsv546265 1 54356866 54370863 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173852 M 17421 0 1 "" 1780862412_A esv3329732 1 54357752 54358950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692372 M 185 1 0 "" NA19239 esv24487 1 54384801 54387753 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14664 M 40 0 1 CDCP2 NA18511 dgv5n21 1 54385957 54388187 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv524287,nsv520256 M 2026 0 7 CDCP2 nsv477486 1 54453611 54453611 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011936 M 9 1 0 MRPL37 NA18517 nsv829893 1 54521444 54715281 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446629 M 95 0 1 SSBP3 nsv509291 1 54534730 54649255 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619802 M 4 1 0 SSBP3 NA10860 nsv461550 1 54541917 54559997 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537929 M 1557 0 1 SSBP3 HGDP00857 nsv470713 1 54547791 54571340 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547731 M 443 0 1 SSBP3 HGDP01228 nsv472617 1 54572299 54572299 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017615 M 9 1 0 SSBP3 NA18555 esv3423065 1 54607978 54608052 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670888,essv8670889 M 185 2 0 SSBP3 NA12878,NA12891 nsv822631 1 54642065 54646166 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426387 M 31 1 0 SSBP3 AK6 nsv461561 1 54642404 55125958 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537939 M 1557 1 0 ACOT11,C1orf177,DHCR24,FAM151A,MROH7,MROH7-TTC4,PARS2,SSBP3,TTC22,TTC4 HGDP00764 nsv546266 1 54642404 55125958 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173853 M 17421 1 0 ACOT11,C1orf177,DHCR24,FAM151A,MROH7,MROH7-TTC4,PARS2,SSBP3,TTC22,TTC4 HGDP00764 esv2490522 1 54714608 54714674 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5313979 M 1 0 1 "" NA18507 nsv461572 1 54756695 54842574 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537947 M 1557 1 0 ACOT11 1780854017_A nsv546267 1 54756695 54842574 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173854 M 17421 1 0 ACOT11 1780854017_A nsv945960 1 54763729 54779280 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766864,nssv1766883,nssv1766914,nssv1766910,nssv1766860,nssv1766897,nssv1766854,nssv1766882,nssv1766917,nssv1766873,nssv1766918,nssv1766880,nssv1766916,nssv1766902,nssv1766845,nssv1766928,nssv1766920,nssv1766929,nssv1766840,nssv1766924,nssv1766913,nssv1766891,nssv1766858,nssv1766888,nssv1766846,nssv1766905,nssv1766853,nssv1766863,nssv1766919,nssv1766892,nssv1766856,nssv1766859,nssv1766852,nssv1766872,nssv1766841,nssv1766895,nssv1766837,nssv1766904,nssv1766843,nssv1766927,nssv1766921,nssv1766912,nssv1766844,nssv1766906,nssv1766855,nssv1766869,nssv1766842,nssv1766885,nssv1766850,nssv1766887,nssv1766851,nssv1766836,nssv1766857,nssv1766876,nssv1766839,nssv1766874,nssv1766838,nssv1766889,nssv1766865,nssv1766898,nssv1766848,nssv1766911,nssv1766867,nssv1766903,nssv1766922,nssv1766877,nssv1766915,nssv1766878,nssv1766849,nssv1766894,nssv1766847,nssv1766881,nssv1766893,nssv1766884,nssv1766908,nssv1766861,nssv1766868,nssv1766866,nssv1766909,nssv1766896,nssv1766886,nssv1766926,nssv1766932,nssv1766930,nssv1766875,nssv1766862,nssv1766907,nssv1766871,nssv1766931,nssv1766901,nssv1766900,nssv1766870,nssv1766899,nssv1766890,nssv1766925,nssv1766879,nssv1766923 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv829904 1 54786874 54959645 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446640 M 95 0 1 ACOT11,FAM151A,MROH7,MROH7-TTC4,TTC4 nsv461583 1 54797516 54822394 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537958 M 1557 1 0 ACOT11 HGDP01195 nsv546268 1 54797516 54822394 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173855 M 17421 1 0 ACOT11 HGDP01195 nsv516654 1 54818627 54850634 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv669917,nssv680692,nssv682791,nssv684126 M 2026 0 4 ACOT11,FAM151A nsv817614 1 54819123 55973612 CNV gain Forsberg_et_al_2012 22305530 SNP array nssv1415558 M 6 1 0 ACOT11,BSND,C1orf177,DHCR24,FAM151A,LOC100507634,MIR4422,MROH7,MROH7-TTC4,PARS2,PCSK9,TMEM61,TTC22,TTC4,USP24 102 nsv461594 1 54831883 54995778 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537968 M 1557 1 0 ACOT11,FAM151A,MROH7,MROH7-TTC4,PARS2,TTC4 HGDP01101 nsv546269 1 54831883 54995778 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173856 M 17421 1 0 ACOT11,FAM151A,MROH7,MROH7-TTC4,PARS2,TTC4 HGDP01101 nsv910 1 54844047 54901583 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6611,nssv2142 M 9 0 2 ACOT11,FAM151A,MROH7,MROH7-TTC4 NA12156,NA18555 esv33550 1 54861486 54879213 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94047,essv94059,essv97113,essv97032,essv100011,essv101671,essv93059,essv97050,essv100678,essv99560 M 51 4 4 ACOT11,FAM151A 21656,21802,21817,21863,21909,22075,22086,22335 esv24082 1 54861813 54868562 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19377,esv16814,esv19119 M 40 23 1 ACOT11 NA07045,NA11931,NA11993,NA12044,NA12239,NA12287,NA12749,NA12828,NA12878,NA18508,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv546270 1 54863054 54866412 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713213 M 17421 0 1 ACOT11 esv2651907 1 54863814 54868582 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282507 M 1 0 1 ACOT11 NA18507 esv2181722 1 54864671 54868727 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4551491 M 1 0 1 ACOT11 NA18507 nsv822642 1 54864767 54865524 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1422369 M 31 1 0 ACOT11 NA18552 dgv38n67 1 54864767 54865999 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822653,nsv822675 M 31 0 2 ACOT11 AK2,AK20 esv1002091 1 54864767 54865999 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586810 M 3 1 0 ACOT11 HuRef dgv39n67 1 54864767 54866063 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822686,nsv822664 M 31 3 0 ACOT11 AK12,AK16,NA18997 nsv822698 1 54864767 54866715 CNV gain+loss Park_et_al_2010 20364138 Oligo aCGH nssv1426388,nssv1427253,nssv1439295,nssv1424040,nssv1440809,nssv1423474 M 31 3 3 ACOT11 AK6,AK8,NA18592,NA18947,NA18968,NA18969 nsv822709 1 54864767 54876075 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437596 M 31 1 0 ACOT11 NA18547 nsv820219 1 54864797 54876172 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418608 M 2 1 0 ACOT11 AK1 esv1004742 1 54864917 54868101 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586765 M 3 1 0 ACOT11 HuRef nsv821518 1 54864917 54868562 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420314 M 1 0 1 ACOT11 NA10851 nsv822720 1 54864917 54868562 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1432097,nssv1423958,nssv1436337,nssv1435653,nssv1440406,nssv1440122,nssv1428023,nssv1433417,nssv1428824,nssv1425494,nssv1426389,nssv1431811,nssv1423115,nssv1437607,nssv1438586,nssv1427254,nssv1437936,nssv1431069,nssv1434167,nssv1424053,nssv1437222,nssv1440810,nssv1430343,nssv1439457,nssv1424736,nssv1423485,nssv1434865,nssv1429560,nssv1421451,nssv1422370 M 31 0 30 ACOT11 AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 esv2628077 1 54864938 54867840 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5211693 M 1 0 1 ACOT11 NA18507 dgv278n54 1 54865783 54866632 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546272,nsv546274,nsv546273,nsv546271 M 17421 0 13 ACOT11 dgv279n54 1 54865783 54867594 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546283,nsv546286,nsv546276,nsv546277,nsv546275,nsv546278,nsv546284,nsv546288 M 17421 0 229 ACOT11 dgv280n54 1 54865888 54866632 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546280,nsv546282,nsv546289,nsv546281,nsv546285,nsv546279 M 17421 0 10 ACOT11 dgv281n54 1 54865992 54866992 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546287,nsv546290 M 17421 0 2 ACOT11 dgv282n54 1 54866157 54867645 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546295,nsv546292,nsv546291,nsv546296,nsv546294,nsv546293 M 17421 0 7 ACOT11 nsv546297 1 54867594 54868500 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713476,nssv713475,nssv713477 M 17421 3 0 ACOT11 nsv546298 1 54867697 54879521 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713478 M 17421 0 1 ACOT11 nsv1000673 1 54869026 55056306 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480763 M 29084 1 0 ACOT11,C1orf177,MROH7,MROH7-TTC4,PARS2,TTC22,TTC4 nsv1004778 1 54873441 55002900 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471358 M 29084 1 0 MROH7,MROH7-TTC4,PARS2,TTC4 nsv461605 1 54892103 54923052 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537979 M 1557 1 0 MROH7,MROH7-TTC4 HGDP00031 nsv546299 1 54892103 54923052 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173857 M 17421 1 0 MROH7,MROH7-TTC4 HGDP00031 dgv90e59 1 54957560 54957755 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302673,esv3302854 M 185 22 0 MROH7-TTC4,TTC4 NA07000,NA11920,NA12006,NA12144,NA12749,NA18499,NA18501,NA18504,NA18516,NA18523,NA18537,NA18856,NA18909,NA18973,NA19093,NA19099,NA19108,NA19129,NA19137,NA19190,NA19238,NA19240 esv3390763 1 54957580 54957740 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670890,essv8670891 M 185 2 0 MROH7-TTC4,TTC4 NA19238,NA19240 dgv166n100 1 54980070 55043127 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005734,nsv1005393 M 29084 2 0 MROH7-TTC4,PARS2,TTC22,TTC4 nsv546300 1 55033539 55046168 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713479 M 17421 0 1 C1orf177,TTC22 esv2758937 1 55042239 55081197 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756844 M 270 0 4 C1orf177 NA18854,NA19093,NA19171,NA19173 nsv160901 1 55047252 55047252 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179479 M 24 C1orf177 esv1945281 1 55059971 55060646 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4673376 M 1 0 1 C1orf177 NA18507 esv6692 1 55060035 55060723 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29133 M 1 0 0 C1orf177 esv3026 1 55060099 55060555 CNV loss Wang_et_al_2008 18987735 Sequencing essv25467 M 1 0 1 C1orf177 YH esv1224986 1 55060150 55060468 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3623019 M 2 0 1 C1orf177 HuRef nsv829915 1 55067201 55230951 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446651 M 95 1 0 C1orf177,DHCR24,TMEM61 nsv10173 1 55073253 55079201 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16439,nssv13760 M 31 0 2 C1orf177 NA18853,NA19173 esv23914 1 55073771 55077579 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12312 M 40 0 1 C1orf177 NA19108 nsv514928 1 55074400 55076240 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2863244,nssv2864580,nssv2860398,nssv2859556,nssv2861716,nssv2866454,nssv2862057,nssv2863144,nssv2859681,nssv2861943,nssv2865286,nssv2858610,nssv2859643,nssv2859092,nssv2861114,nssv2864772,nssv2864901,nssv2861577,nssv2858898,nssv2863972,nssv2865690,nssv2867742,nssv2867968,nssv2863370,nssv2860108,nssv2865089,nssv2861744,nssv2861982,nssv2861556,nssv2865332,nssv2860387,nssv2861919,nssv2859692,nssv2862903,nssv2863304,nssv2864476,nssv2860239,nssv2859021,nssv2862206,nssv2861000,nssv2867313,nssv2858930,nssv2866311,nssv2862415,nssv2859958,nssv2867914,nssv2868471,nssv2866349,nssv2860452,nssv2864767,nssv2863985,nssv2867332,nssv2868091,nssv2863616,nssv2862895,nssv2865388,nssv2866599,nssv2862368,nssv2867152,nssv2860342,nssv2859797,nssv2859156,nssv2862884,nssv2864806,nssv2868034,nssv2863879,nssv2863968,nssv2864627,nssv2862408,nssv2864166,nssv2864303,nssv2859666,nssv2861720,nssv2863520,nssv2867102,nssv2864140,nssv2862212,nssv2868242,nssv2865723,nssv2858701,nssv2858649,nssv2868473,nssv2859895,nssv2865291,nssv2859673,nssv2868180,nssv2858806,nssv2862731,nssv2859116,nssv2864930,nssv2860862,nssv2862005,nssv2858605,nssv2863562,nssv2861373,nssv2867447,nssv2861580,nssv2859936,nssv2863822,nssv2860759,nssv2859906,nssv2867899,nssv2866714,nssv2858911,nssv2862523,nssv2864644,nssv2859925,nssv2862198,nssv2864302,nssv2861743,nssv2862370,nssv2864454,nssv2862176,nssv2862472,nssv2868168,nssv2866464,nssv2867173,nssv2860450,nssv2858531,nssv2865696,nssv2862840,nssv2866485,nssv2867770,nssv2864565,nssv2862266,nssv2863533,nssv2866326,nssv2863850,nssv2861734,nssv2862407,nssv2866557,nssv2865520,nssv2860283,nssv2868230,nssv2861314,nssv2867155,nssv2862659,nssv2867124,nssv2868440,nssv2862616,nssv2858609,nssv2861298,nssv2861567,nssv2861281,nssv2866302,nssv2863128,nssv2861488,nssv2864425,nssv2863147,nssv2863377,nssv2861566,nssv2864633,nssv2861383,nssv2866297,nssv2868173,nssv2859926,nssv2867087,nssv2858747,nssv2859907,nssv2865250,nssv2861615,nssv2858555,nssv2867131,nssv2860448,nssv2860263,nssv2866210,nssv2862405,nssv2864899,nssv2863034,nssv2858915,nssv2866705,nssv2865358,nssv2864705,nssv2860626,nssv2864347,nssv2867846,nssv2861911,nssv2864805,nssv2860966,nssv2859671,nssv2861236,nssv2864452,nssv2867701,nssv2866851,nssv2863760,nssv2863460,nssv2863781,nssv2864234,nssv2867638,nssv2862071,nssv2867792,nssv2861016,nssv2863982,nssv2866852,nssv2860161,nssv2863577,nssv2864679,nssv2859555,nssv2859008,nssv2865599,nssv2866745,nssv2862072,nssv2864525,nssv2863836,nssv2861125,nssv2864863,nssv2865504,nssv2867373,nssv2859637,nssv2865346,nssv2862592,nssv2861388,nssv2859055,nssv2863893,nssv2866370,nssv2862340,nssv2861306,nssv2866394,nssv2862022,nssv2865888,nssv2868246,nssv2860608,nssv2862779,nssv2859083,nssv2863687,nssv2867597,nssv2867282,nssv2864432,nssv2867859,nssv2867786,nssv2859468,nssv2861113,nssv2867521,nssv2860665,nssv2867023,nssv2867019,nssv2865736,nssv2868422,nssv2864579,nssv2862371,nssv2862929,nssv2863613,nssv2868186,nssv2861544,nssv2861364,nssv2865137,nssv2861668,nssv2868238,nssv2865706,nssv2866741,nssv2862213,nssv2867956,nssv2859505,nssv2865744,nssv2865916,nssv2862425,nssv2863751,nssv2860983,nssv2861239,nssv2864196,nssv2867978,nssv2860364,nssv2866376,nssv2860224,nssv2868401,nssv2868439,nssv2864508,nssv2859112,nssv2867489,nssv2863153,nssv2860677,nssv2862360,nssv2862153,nssv2866032,nssv2863311,nssv2866573,nssv2864294,nssv2858985,nssv2858708,nssv2862166,nssv2858804,nssv2867985,nssv2866192,nssv2865292,nssv2860068,nssv2864886,nssv2861177,nssv2859099,nssv2859747,nssv2868372,nssv2861149,nssv2867763,nssv2860236,nssv2866001,nssv2861568,nssv2865705,nssv2860533,nssv2859470,nssv2866759,nssv2860553,nssv2861384,nssv2863041,nssv2866080,nssv2864242,nssv2858844,nssv2862583,nssv2865495,nssv2858746,nssv2863486,nssv2860863,nssv2860741,nssv2865536,nssv2866490,nssv2867275,nssv2865621,nssv2865290,nssv2859144,nssv2863213,nssv2866479,nssv2861287,nssv2860806,nssv2862569,nssv2866538,nssv2865111,nssv2862137,nssv2864430,nssv2858654,nssv2862154,nssv2861126,nssv2863503,nssv2866959,nssv2868323,nssv2862744,nssv2860989,nssv2866866,nssv2866920,nssv2868198,nssv2864203,nssv2864513,nssv2862244,nssv2859062,nssv2864836,nssv2858634,nssv2860587,nssv2862732,nssv2862139,nssv2860451,nssv2865080,nssv2861843,nssv2858959,nssv2867507,nssv2861128,nssv2865667,nssv2866539,nssv2859633,nssv2867882,nssv2861522,nssv2863984,nssv2859197,nssv2861753,nssv2867423,nssv2864832,nssv2867915,nssv2861756,nssv2867561,nssv2862934,nssv2867854,nssv2867575,nssv2860304,nssv2865347,nssv2866740,nssv2861757,nssv2863880,nssv2867826,nssv2858604,nssv2862185,nssv2862689,nssv2868174,nssv2860570,nssv2865196,nssv2859656,nssv2864437,nssv2866270,nssv2867429,nssv2860456,nssv2865285,nssv2860872,nssv2868273,nssv2863932,nssv2867929,nssv2860743,nssv2860792,nssv2867606,nssv2866002,nssv2865809,nssv2861038,nssv2867009,nssv2867736,nssv2859741,nssv2868095,nssv2866727,nssv2863793,nssv2867553,nssv2858614,nssv2865722,nssv2866281,nssv2863724,nssv2863794,nssv2865208,nssv2867117,nssv2867574,nssv2865422,nssv2865612,nssv2863133,nssv2859289,nssv2862671,nssv2861735,nssv2865718,nssv2861135,nssv2864134,nssv2863865,nssv2859243,nssv2860858,nssv2868453,nssv2867707,nssv2863112,nssv2866430,nssv2867817,nssv2860656,nssv2862720,nssv2867773,nssv2860237,nssv2859359,nssv2864463,nssv2865249,nssv2861966,nssv2861214,nssv2862044,nssv2867955,nssv2863977,nssv2861263,nssv2859007,nssv2861363,nssv2861685,nssv2865161,nssv2860479,nssv2866932,nssv2859804,nssv2862551,nssv2865041,nssv2861039,nssv2860248,nssv2866327,nssv2867569,nssv2859510,nssv2864783,nssv2864222,nssv2866007,nssv2861208,nssv2866846,nssv2858931,nssv2862257,nssv2862568,nssv2865584,nssv2865368,nssv2866152,nssv2863557,nssv2859378,nssv2859537,nssv2863696,nssv2863589,nssv2866336,nssv2863148,nssv2867024,nssv2865359,nssv2858949,nssv2859305,nssv2867323,nssv2864070,nssv2858560,nssv2859559,nssv2861669,nssv2861203,nssv2862996,nssv2861956,nssv2860071,nssv2862795,nssv2861351 M 2366 488 0 C1orf177 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 esv2421957 1 55074411 55078004 CNV duplication Altshuler_et_al_2010 20811451 SNP array essv5046238,essv5034897,essv5012483,essv5068195,essv5111313,essv5086826,essv5099243,essv5036642,essv5056173,essv5026721,essv5153962,essv5053130,essv5142683,essv5012036,essv5124999,essv5117155,essv5022758,essv5117510,essv5116726,essv5145569,essv5014992,essv5116057,essv5090258,essv5069892,essv5027944,essv5134018,essv5149612,essv5086649,essv5014607,essv5076947,essv5046714,essv5134414,essv5094672,essv5023715,essv5054924,essv5066653,essv5150072,essv5021627,essv5124881,essv5067688,essv5111164,essv5005039,essv5053869,essv5150737,essv5055369,essv5120472,essv5143862,essv5012207,essv5092400,essv5055206,essv5152286,essv5077999,essv5092004,essv5118809,essv5086968,essv5072239,essv5134475,essv5143274,essv5099814,essv5025336,essv5113353,essv5041910,essv5029693,essv5005254,essv5053676,essv5012658,essv5052571,essv5003777,essv5070864,essv5018853,essv5054067,essv5105713,essv5030915,essv5013116,essv5114520,essv5034970,essv5054227,essv5155945,essv5087905,essv5148914,essv5025794,essv5152692,essv5062500,essv5136254,essv5127388,essv5112313,essv5006266,essv5083966,essv5140253,essv5076130,essv5149682,essv5046228,essv5038513,essv5039250,essv5104586,essv5067922,essv5052121,essv5062900,essv5038356,essv5024459,essv5063607,essv5112063,essv5041743,essv5116932,essv5121699,essv5076734,essv5044658,essv5048083,essv5147908,essv5014296,essv5009869,essv5117493,essv5015678,essv5147974,essv5156959,essv5108291,essv5132127,essv5061845,essv5028583,essv5100195,essv5059939,essv5076964,essv5052559,essv5030730,essv5156431,essv5016388,essv5117642,essv5032883,essv5113225,essv5047861,essv5047126,essv5048280,essv5005931,essv5037627,essv5006240,essv5091721,essv5063941,essv5101395,essv5056375,essv5136953,essv5022148,essv5072699,essv5100519,essv5114403,essv5033281,essv5053943,essv5150213,essv5139152,essv5153605,essv5082225,essv5067844,essv5058800,essv5022838,essv5084743,essv5032901,essv5117456,essv5154470 M 1184 157 0 C1orf177 NA06993,NA06994,NA07000,NA07022,NA07029,NA07055,NA07056,NA07345,NA07348,NA07357,NA10830,NA10831,NA10835,NA10838,NA10839,NA10846,NA10847,NA10854,NA10855,NA10856,NA10861,NA10863,NA11829,NA11830,NA11832,NA11840,NA11881,NA11993,NA11994,NA11995,NA12005,NA12006,NA12043,NA12056,NA12057,NA12144,NA12145,NA12155,NA12156,NA12248,NA12249,NA12264,NA12740,NA12751,NA12752,NA12761,NA12763,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12864,NA12865,NA12872,NA12892,NA18501,NA18506,NA18507,NA18508,NA18515,NA18532,NA18542,NA18550,NA18561,NA18564,NA18566,NA18572,NA18576,NA18582,NA18594,NA18605,NA18608,NA18609,NA18620,NA18623,NA18633,NA18637,NA18852,NA18858,NA18859,NA18862,NA18871,NA18872,NA18912,NA18913,NA18914,NA18940,NA18943,NA18944,NA18945,NA18947,NA18949,NA18951,NA18952,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18994,NA18995,NA18997,NA18998,NA19000,NA19005,NA19094,NA19098,NA19099,NA19101,NA19116,NA19119,NA19120,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19138,NA19139,NA19140,NA19141,NA19142,NA19144,NA19152,NA19159,NA19160,NA19161,NA19194,NA19203,NA19204,NA19206,NA19207,NA19208,NA19210,NA19211,NA19222 nsv441694 1 55074411 55078004 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656664,nssv1656667,nssv1656668,nssv1656665,nssv1656666 M 270 0 5 C1orf177 NA18853,NA18854,NA19093,NA19171,NA19173 esv2078805 1 55106731 55107151 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4822883 M 1 0 1 DHCR24 NA18507 esv995636 1 55106925 55106976 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585443 M 3 0 1 DHCR24 HuRef esv1764339 1 55106932 55106984 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4120347 M 2 0 1 DHCR24 HuRef esv6509 1 55111198 55111335 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28950 M 1 0 0 DHCR24 esv2550618 1 55142964 55144904 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5369498 M 1 0 1 "" NA18507 esv2207439 1 55143848 55144927 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4904648 M 1 0 1 "" NA18507 nsv523732 1 55152527 55158315 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699548 M 2026 1 0 "" nsv515980 1 55158174 55158315 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv691742,nssv665573,nssv682312,nssv656770 M 2026 4 0 "" nsv527361 1 55158174 55169994 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703791 M 2026 1 0 "" dgv167n100 1 55223900 55277238 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997833,nsv1004581 M 29084 2 0 BSND,TMEM61 esv7078 1 55241060 55241225 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29519 M 1 0 0 BSND esv2431579 1 55241098 55241869 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5245033 M 1 1 0 BSND NA18507 esv9677 1 55241135 55241291 CNV gain Ahn_et_al_2009 19470904 Sequencing essv32118 M 1 0 0 BSND nsv506929 1 55259164 55265164 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620654 M 4 0 0 "" NA15510 nsv523036 1 55268583 55268719 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698719 M 2026 0 1 "" nsv527129 1 55273017 55296572 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703514 M 2026 0 1 PCSK9 nsv518539 1 55273017 55326142 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695983 M 2026 0 1 PCSK9,USP24 nsv546301 1 55278239 55280774 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713480 M 17421 1 0 PCSK9 nsv518638 1 55282460 55298884 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696087 M 2026 0 1 PCSK9 nsv527707 1 55288592 55298884 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704186 M 2026 0 1 PCSK9 nsv546302 1 55291116 55292996 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713481 M 17421 0 1 PCSK9 nsv517995 1 55296572 55298884 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv655142,nssv678581 M 2026 0 2 PCSK9 nsv525879 1 55329655 55404238 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702079 M 2026 0 1 USP24 nsv921 1 55416110 55449535 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5572 M 9 1 0 USP24 NA19129 esv2496177 1 55425996 55427353 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5306781 M 1 0 1 USP24 NA18507 nsv481393 1 55438173 55438173 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012564 M 9 0 0 USP24 nsv473865 1 55438843 55438843 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019918 M 9 1 0 USP24 NA12156 nsv945962 1 55460929 55467383 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768878,nssv1766999,nssv1766952,nssv1767014,nssv1766962,nssv1767013,nssv1766968,nssv1768889,nssv1766959,nssv1767002,nssv1768879,nssv1767021,nssv1766953,nssv1767000,nssv1766954,nssv1766976,nssv1768877,nssv1766993,nssv1768876,nssv1766991,nssv1768880,nssv1766998,nssv1766978,nssv1766989,nssv1766981,nssv1767004,nssv1768883,nssv1766980,nssv1768884,nssv1768888,nssv1766967,nssv1767023,nssv1766979,nssv1766992,nssv1766966,nssv1767016,nssv1766970,nssv1767018,nssv1766960,nssv1767011,nssv1766955,nssv1766997,nssv1766956,nssv1766984,nssv1766951,nssv1768887,nssv1768881,nssv1768893,nssv1766974,nssv1766987,nssv1768875,nssv1768891,nssv1766969,nssv1767005,nssv1766965,nssv1766973,nssv1766971,nssv1766977,nssv1766964,nssv1766996,nssv1766958,nssv1768874,nssv1766957,nssv1766986,nssv1766961,nssv1768886,nssv1766963,nssv1768872,nssv1768882,nssv1766975,nssv1766972,nssv1767020,nssv1768894,nssv1768890,nssv1767006,nssv1766994,nssv1766950,nssv1767019,nssv1768885,nssv1767001,nssv1766990,nssv1766985,nssv1768892,nssv1767008,nssv1768873,nssv1766988,nssv1767010,nssv1767009,nssv1767022,nssv1767017,nssv1766995,nssv1767012,nssv1767015,nssv1767003,nssv1766982,nssv1766983,nssv1767007 M 97 10 0 MIR4422 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509302 1 55476009 55476009 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619803,nssv621096,nssv623782 M 4 3 0 "" NA10860,NA15510,NA18994 esv3417889 1 55477964 55478672 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652091 M 185 1 0 "" NA19240 nsv512740 1 55478460 55478644 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625367 M 1 1 0 "" 1 esv1012330 1 55478495 55478495 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4275800 M 2 1 0 "" HuRef nsv437209 1 55491599 55504321 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467090 M 60 0 1 "" NA19094 nsv10184 1 55501343 55857421 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16769,nssv14073 M 31 0 2 "" NA07048,NA19173 nsv478697 1 55512161 55512161 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013221 M 9 1 0 "" NA18507 nsv480501 1 55515922 55515922 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013006 M 9 0 0 "" esv2336884 1 55611816 55612241 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4532235 M 1 0 1 "" NA18507 esv28904 1 55623755 55628131 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10041 M 40 0 3 "" NA18517,NA18916,NA19257 esv2562345 1 55623815 55628570 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5392322 M 1 0 1 "" NA18507 esv2559365 1 55624222 55626514 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5323990 M 1 0 1 "" NA18507 nsv517685 1 55625575 55633149 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv678181,nssv668001,nssv655580,nssv667056,nssv654230,nssv691008,nssv666200,nssv684636,nssv652613,nssv664967,nssv656318,nssv666543,nssv693159,nssv672297,nssv653812,nssv664077,nssv672800,nssv690335,nssv679069 M 2026 0 19 "" esv3392831 1 55653363 55653372 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863699 M 185 1 0 "" NA12005 esv2007537 1 55658781 55659219 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4939608 M 1 0 1 "" NA18507 nsv1008241 1 55694596 55745184 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701232 M 29084 1 0 "" esv2382850 1 55747206 55747584 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4704780 M 1 0 1 "" NA18507 nsv160526 1 55747311 55747364 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179104 M 24 "" esv22041 1 55774975 55775527 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11545 M 40 0 2 "" NA11995,NA12006 esv3423703 1 55809138 55809138 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653213,essv8653214,essv8653215 M 185 3 0 "" NA12878,NA12891,NA12892 nsv523489 1 55810995 55839091 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699256 M 2026 1 0 "" nsv461617 1 55827778 55896098 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537991 M 1557 1 0 "" HGDP00279 nsv546303 1 55827778 55896098 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173858 M 17421 1 0 "" HGDP00279 nsv1014866 1 55831642 55901680 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478505 M 29084 1 0 "" esv2646605 1 55833809 55835343 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5241069 M 1 0 1 "" NA18507 nsv522334 1 55840764 55840982 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695114 M 2026 0 1 "" nsv528352 1 55840764 55840982 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704937 M 2026 1 0 "" nsv526148 1 55874185 55919038 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702406 M 2026 1 0 "" esv2562695 1 55898730 55906739 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5196280 M 1 0 1 "" NA18507 esv1073347 1 55901990 55902086 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3887661 M 2 0 1 "" HuRef nsv829926 1 55961080 56133333 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446662 M 95 1 0 "" nsv546304 1 55968247 56012603 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713482 M 17421 0 1 "" nsv945963 1 56025492 56031359 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768901,nssv1768920,nssv1768902,nssv1768986,nssv1768924,nssv1768988,nssv1768972,nssv1768964,nssv1768977,nssv1768930,nssv1768974,nssv1768982,nssv1768913,nssv1768933,nssv1768926,nssv1768943,nssv1768981,nssv1768895,nssv1768896,nssv1768939,nssv1768973,nssv1768963,nssv1768898,nssv1768989,nssv1768910,nssv1768945,nssv1768899,nssv1768949,nssv1768979,nssv1768931,nssv1768904,nssv1768966,nssv1768976,nssv1768958,nssv1768903,nssv1768918,nssv1768906,nssv1768925,nssv1768897,nssv1768922,nssv1768912,nssv1768937,nssv1768915,nssv1768953,nssv1768978,nssv1768967,nssv1768900,nssv1768928,nssv1768923,nssv1768929,nssv1768907,nssv1768934,nssv1768911,nssv1768927,nssv1768914,nssv1768955,nssv1768905,nssv1768940,nssv1768980,nssv1768948,nssv1768917,nssv1768970,nssv1768908,nssv1768921,nssv1768919,nssv1768944,nssv1768916,nssv1768936,nssv1768909,nssv1768947,nssv1768975,nssv1768984,nssv1768960,nssv1768965,nssv1768938,nssv1768971,nssv1768954,nssv1768990,nssv1768961,nssv1768985,nssv1768951,nssv1768968,nssv1768956,nssv1768962,nssv1768950,nssv1768991,nssv1768987,nssv1768959,nssv1768957,nssv1768932,nssv1768983,nssv1768969,nssv1768935,nssv1768941,nssv1768942,nssv1768946,nssv1768952 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3364690 1 56041228 56041267 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899013,essv8899012,essv8899014,essv8899011 M 185 4 0 "" NA18592,NA18961,NA18973,NA19102 esv3306891 1 56041243 56041244 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7748995,essv7757875,essv7756032,essv7743625 M 185 4 0 "" NA18592,NA18961,NA18973,NA19102 nsv527396 1 56042409 56053497 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703831 M 2026 0 1 "" nsv1002958 1 56051284 56067700 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468331 M 29084 0 1 "" esv2614647 1 56173354 56174938 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5230133 M 1 0 1 "" NA18507 esv9548 1 56173661 56174456 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31989 M 1 0 0 "" esv2378584 1 56173687 56174385 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4586160 M 1 0 1 "" NA18507 esv2978 1 56173840 56174365 CNV loss Wang_et_al_2008 18987735 Sequencing essv25419 M 1 0 1 "" YH esv1001410 1 56173880 56174200 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583660 M 3 0 1 "" HuRef esv1318179 1 56173881 56174202 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4113643 M 2 0 1 "" HuRef nsv161096 1 56173882 56174202 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179674 M 24 "" nsv528440 1 56184669 56192781 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705035 M 2026 0 1 "" nsv1003385 1 56203330 56241320 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469156 M 29084 0 1 "" nsv474103 1 56245289 56245289 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011321 M 9 1 0 "" NA18507 esv3344372 1 56430184 56430203 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863700 M 185 1 0 "" NA18516 nsv945964 1 56445883 56450008 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768999,nssv1769079,nssv1768997,nssv1768469,nssv1769001,nssv1769015,nssv1769010,nssv1769056,nssv1769012,nssv1769057,nssv1769071,nssv1769035,nssv1769070,nssv1769062,nssv1769077,nssv1769054,nssv1768993,nssv1769027,nssv1769021,nssv1769080,nssv1769020,nssv1769017,nssv1768996,nssv1769032,nssv1769076,nssv1769043,nssv1769072,nssv1769038,nssv1769002,nssv1769029,nssv1769004,nssv1769061,nssv1769009,nssv1769024,nssv1769003,nssv1768467,nssv1769006,nssv1769050,nssv1769078,nssv1769066,nssv1769069,nssv1769033,nssv1768998,nssv1769030,nssv1769007,nssv1769026,nssv1769075,nssv1768992,nssv1769023,nssv1769082,nssv1769000,nssv1769064,nssv1769073,nssv1769046,nssv1769008,nssv1768470,nssv1768994,nssv1769049,nssv1769011,nssv1769025,nssv1768995,nssv1769040,nssv1769016,nssv1769042,nssv1769014,nssv1769031,nssv1769005,nssv1769036,nssv1769074,nssv1768471,nssv1769013,nssv1769055,nssv1769051,nssv1768466,nssv1769045,nssv1769019,nssv1769052,nssv1769018,nssv1769034,nssv1769028,nssv1769063,nssv1769047,nssv1769068,nssv1769037,nssv1769022,nssv1769058,nssv1769041,nssv1769044,nssv1769059,nssv1768468,nssv1769039,nssv1769081,nssv1769048,nssv1769053,nssv1769060,nssv1769067,nssv1769065 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv516750 1 56500834 56504268 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv670628,nssv689111 M 2026 0 2 "" nsv1015037 1 56556910 56587327 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478704 M 29084 1 0 "" nsv524251 1 56563361 56564197 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700147 M 2026 1 0 "" nsv932 1 56589320 56614849 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4216 M 9 0 1 "" NA12878 esv8427 1 56603427 56607840 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30868 M 1 0 0 "" nsv508204 1 56603432 56613445 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617438 M 4 0 1 "" CHM esv1005520 1 56603630 56612233 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565594 M 3 0 1 "" HuRef nsv511692 1 56603670 56607817 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626331 M 1 0 1 "" 1 esv4577 1 56603682 56607644 CNV loss Wang_et_al_2008 18987735 Sequencing essv27018 M 1 0 1 "" YH esv1998276 1 56660104 56660808 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4957104 M 1 0 1 "" NA18507 esv8756 1 56660118 56660733 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31197 M 1 0 0 "" esv4146 1 56660244 56660659 CNV loss Wang_et_al_2008 18987735 Sequencing essv26587 M 1 0 1 "" YH dgv92e59 1 56768616 56768945 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3303002,esv3302527 M 185 64 0 PPAP2B NA07000,NA07037,NA07051,NA07357,NA11919,NA11931,NA11993,NA11995,NA12003,NA12004,NA12006,NA12043,NA12144,NA12155,NA12156,NA12287,NA12489,NA12717,NA12749,NA12750,NA12761,NA12878,NA12891,NA12892,NA18501,NA18504,NA18505,NA18508,NA18511,NA18516,NA18517,NA18520,NA18532,NA18550,NA18552,NA18561,NA18573,NA18582,NA18603,NA18856,NA18858,NA18861,NA18871,NA18909,NA18912,NA18916,NA18944,NA18947,NA18949,NA18956,NA18959,NA18961,NA18964,NA18965,NA19005,NA19093,NA19102,NA19108,NA19116,NA19129,NA19147,NA19190,NA19238,NA19257 esv3372563 1 56768622 56768938 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670894,essv8670893,essv8670892,essv8670895 M 185 4 0 PPAP2B NA12878,NA12891,NA12892,NA19238 nsv945965 1 56775673 56778055 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768487,nssv1768531,nssv1768483,nssv1768498,nssv1768473,nssv1768562,nssv1768551,nssv1768538,nssv1768480,nssv1768513,nssv1768490,nssv1769492,nssv1768474,nssv1768539,nssv1768478,nssv1768510,nssv1768550,nssv1768516,nssv1768476,nssv1768497,nssv1768489,nssv1769490,nssv1768558,nssv1768548,nssv1768484,nssv1768544,nssv1768475,nssv1768508,nssv1768496,nssv1768542,nssv1768555,nssv1768505,nssv1768494,nssv1768514,nssv1768503,nssv1768561,nssv1768477,nssv1768524,nssv1768556,nssv1768532,nssv1768488,nssv1768528,nssv1768552,nssv1768521,nssv1768501,nssv1768527,nssv1768554,nssv1768511,nssv1768485,nssv1768506,nssv1768486,nssv1768523,nssv1768491,nssv1768504,nssv1768500,nssv1768536,nssv1768482,nssv1768502,nssv1768492,nssv1768517,nssv1768549,nssv1768472,nssv1768493,nssv1768535,nssv1768557,nssv1768529,nssv1768481,nssv1768518,nssv1768479,nssv1768543,nssv1768553,nssv1768519,nssv1768560,nssv1768545,nssv1768533,nssv1768509,nssv1768522,nssv1768530,nssv1768515,nssv1768559,nssv1768546,nssv1768495,nssv1768507,nssv1768499,nssv1769491,nssv1768512,nssv1768540,nssv1768537,nssv1768563,nssv1768534,nssv1768525,nssv1768526,nssv1769488,nssv1768547,nssv1768520,nssv1768541,nssv1769489 M 97 10 0 PPAP2B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3349117 1 56775935 56775954 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594312 M 185 1 0 PPAP2B NA12043 nsv473358 1 56818036 56818036 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011232 M 9 1 0 "" NA19129 nsv528673 1 56821549 56832159 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705311 M 2026 0 1 "" nsv945966 1 56823265 56824381 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769500,nssv1769555,nssv1769506,nssv1769519,nssv1769573,nssv1769530,nssv1769522,nssv1769546,nssv1769511,nssv1769558,nssv1769575,nssv1769588,nssv1769577,nssv1769585,nssv1769507,nssv1769559,nssv1769505,nssv1769561,nssv1769499,nssv1769586,nssv1769570,nssv1769562,nssv1769571,nssv1769584,nssv1769494,nssv1769541,nssv1769508,nssv1769557,nssv1769497,nssv1769581,nssv1769517,nssv1769534,nssv1769512,nssv1769525,nssv1769579,nssv1769552,nssv1769510,nssv1769540,nssv1769521,nssv1769560,nssv1769524,nssv1769544,nssv1769503,nssv1769582,nssv1769498,nssv1769533,nssv1769513,nssv1769567,nssv1769501,nssv1769537,nssv1769496,nssv1769536,nssv1769576,nssv1769589,nssv1769502,nssv1769520,nssv1769509,nssv1769554,nssv1769574,nssv1769563,nssv1769515,nssv1769493,nssv1769504,nssv1769587,nssv1769495,nssv1769531,nssv1769572,nssv1769547,nssv1769514,nssv1769532,nssv1769578,nssv1769529,nssv1769565,nssv1769548,nssv1769568,nssv1769569,nssv1769538,nssv1769535,nssv1769566,nssv1769543,nssv1769518,nssv1769516,nssv1769539,nssv1769527,nssv1769523,nssv1769580,nssv1769556,nssv1769551,nssv1769550,nssv1769526,nssv1769553,nssv1769545,nssv1769564,nssv1769542,nssv1769583,nssv1769549,nssv1769528 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3397322 1 56834936 56834974 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863701 M 185 1 0 "" NA12005 esv2762142 1 56855047 56867489 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005390 M 1109 0 1 "" RW_0276 nsv945967 1 56856906 56859055 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769604,nssv1769653,nssv1769671,nssv1769639,nssv1769618,nssv1769624,nssv1769610,nssv1769632,nssv1769597,nssv1769649,nssv1769676,nssv1769613,nssv1769603,nssv1769643,nssv1769608,nssv1769646,nssv1769600,nssv1769666,nssv1769621,nssv1769685,nssv1769669,nssv1769663,nssv1769672,nssv1769682,nssv1769614,nssv1769623,nssv1769668,nssv1769681,nssv1769594,nssv1769680,nssv1769591,nssv1769620,nssv1769596,nssv1769661,nssv1769601,nssv1769616,nssv1769607,nssv1769638,nssv1769595,nssv1769679,nssv1769675,nssv1769641,nssv1769592,nssv1769655,nssv1769673,nssv1769659,nssv1769619,nssv1769657,nssv1769670,nssv1769656,nssv1769605,nssv1769652,nssv1769612,nssv1769625,nssv1769593,nssv1769664,nssv1769674,nssv1769630,nssv1769599,nssv1769644,nssv1769598,nssv1769686,nssv1769606,nssv1769637,nssv1769609,nssv1769658,nssv1769602,nssv1769634,nssv1769667,nssv1769590,nssv1769611,nssv1769633,nssv1769678,nssv1769626,nssv1769660,nssv1769645,nssv1769677,nssv1769627,nssv1769622,nssv1769629,nssv1769635,nssv1769615,nssv1769648,nssv1769684,nssv1769631,nssv1769617,nssv1769662,nssv1769640,nssv1769650,nssv1769642,nssv1769636,nssv1769654,nssv1769665,nssv1769651,nssv1769647,nssv1769628,nssv1769683 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2519231 1 56867435 56868959 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5370210 M 1 0 1 "" NA18507 esv3307682 1 56873464 56873465 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758234,essv7756594,essv7748923,essv7743255,essv7755491 M 185 5 0 "" NA18522,NA18571,NA18638,NA18916,NA19108 esv3409693 1 56873487 56873568 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899016,essv8899020,essv8899017,essv8899018,essv8899019 M 185 5 0 "" NA18522,NA18571,NA18638,NA18916,NA19108 nsv523032 1 56889497 57022146 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698715 M 2026 1 0 C1orf168,PRKAA2 nsv520726 1 56916574 56978254 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv677255,nssv674816 M 2026 0 2 C1orf168,PRKAA2 esv3411748 1 57012524 57012524 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653239,essv8653240,essv8653242 M 185 3 0 C1orf168 NA19238,NA19239,NA19240 esv2568213 1 57014495 57016009 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5220507 M 1 0 1 C1orf168 NA18507 esv7859 1 57014975 57015794 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30300 M 1 0 0 C1orf168 esv2296236 1 57015008 57015759 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4802800 M 1 0 1 C1orf168 NA18507 esv3554 1 57015165 57015649 CNV loss Wang_et_al_2008 18987735 Sequencing essv25995 M 1 0 1 C1orf168 YH esv988788 1 57015207 57015545 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568819 M 3 0 1 C1orf168 HuRef esv1167886 1 57015213 57015552 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4094468 M 2 0 1 C1orf168 HuRef nsv160326 1 57015214 57015552 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178904 M 24 C1orf168 nsv478675 1 57022335 57022335 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018360 M 9 1 0 C1orf168 NA18507 esv3345680 1 57037177 57037196 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594323 M 185 1 0 C1orf168 NA12815 esv3306159 1 57037186 57037187 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7765588 M 185 1 0 C1orf168 NA12815 nsv1000266 1 57063959 57092068 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464183 M 29084 1 0 "" nsv508215 1 57092048 57123738 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617461 M 4 0 1 C8A CHM esv2557221 1 57166819 57167743 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5202402 M 1 1 0 C8B NA18507 esv1122538 1 57167344 57167344 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4152683 M 2 1 0 "" HuRef esv275547 1 57218906 57220328 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585916 M 1250 0 1 "" nsv822731 1 57220946 57221976 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1432108 M 31 0 1 "" NA18972 esv2249607 1 57221133 57221584 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4677458 M 1 0 1 "" NA18507 nsv546305 1 57235914 57589077 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713483 M 17421 1 0 DAB1 nsv10195 1 57319589 57323288 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv14090 M 31 1 0 DAB1 NA18853 nsv10206 1 57325543 57331698 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv11765,nssv12117,nssv14403,nssv17734 M 31 3 1 DAB1 NA07048,NA10839,NA10847,NA19132 nsv526087 1 57349026 57352198 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702333 M 2026 0 1 DAB1 nsv943 1 57470741 57497646 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4224 M 9 1 0 DAB1 NA12878 esv25746 1 57529444 57530198 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19252 M 40 0 4 DAB1 NA06985,NA12828,NA15510,NA19108 nsv954 1 57595728 57638387 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9167 M 9 0 1 DAB1 NA12156 nsv1001771 1 57609677 57840763 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481127 M 29084 0 1 DAB1 esv2031864 1 57633834 57634243 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4732758 M 1 0 1 DAB1 NA18507 nsv966 1 57658583 57688345 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5589 M 9 1 0 DAB1 NA19129 esv26685 1 57659932 57662877 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19188,esv20279 M 40 0 4 DAB1 NA11993,NA11995,NA12156,NA19099 nsv546306 1 57661015 57662255 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713484 M 17421 0 1 DAB1 nsv508013 1 57662511 57668511 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618495 M 4 0 0 DAB1 CHM nsv523574 1 57790691 57860377 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699357 M 2026 0 1 DAB1 nsv945968 1 57843724 57845997 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769701,nssv1769744,nssv1769764,nssv1769751,nssv1769702,nssv1769758,nssv1769689,nssv1769747,nssv1769700,nssv1769757,nssv1769715,nssv1769759,nssv1769771,nssv1769755,nssv1769705,nssv1769748,nssv1769698,nssv1769723,nssv1769695,nssv1769733,nssv1769697,nssv1769728,nssv1769768,nssv1769725,nssv1769694,nssv1769726,nssv1769693,nssv1769712,nssv1769691,nssv1769780,nssv1769765,nssv1769739,nssv1769688,nssv1769719,nssv1769718,nssv1769732,nssv1769769,nssv1769762,nssv1769692,nssv1769763,nssv1769699,nssv1769736,nssv1769696,nssv1769710,nssv1769704,nssv1769753,nssv1769767,nssv1769740,nssv1769708,nssv1769754,nssv1769716,nssv1769743,nssv1769690,nssv1769760,nssv1769772,nssv1769721,nssv1769770,nssv1769687,nssv1769703,nssv1769713,nssv1769706,nssv1769779,nssv1769709,nssv1769720,nssv1769773,nssv1769776,nssv1769711,nssv1769782,nssv1769766,nssv1769749,nssv1769707,nssv1769735,nssv1769714,nssv1769742,nssv1769738,nssv1769756,nssv1769750,nssv1769783,nssv1769717,nssv1769722,nssv1769752,nssv1769746,nssv1769734,nssv1769777,nssv1769761,nssv1769781,nssv1769729,nssv1769727,nssv1769775,nssv1769724,nssv1769731,nssv1769730,nssv1769745,nssv1769737,nssv1769774,nssv1769778,nssv1769741 M 97 10 0 DAB1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3336060 1 57844438 57844457 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678411 M 185 1 0 DAB1 NA12878 esv3308045 1 57844452 57844453 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841152,essv7839756,essv7840617 M 185 3 0 DAB1 NA12878,NA12891,NA12892 esv3359170 1 57844457 57844461 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674040,essv8674039,essv8674038 M 185 3 0 DAB1 NA12878,NA12891,NA12892 esv3893568 1 57856750 58494898 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789659 M 3017 1 0 DAB1,DAB1-AS1 nsv477041 1 57865328 57865328 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014143 M 9 1 0 DAB1 NA12878 esv3893579 1 57914074 57946523 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796454 M 3017 0 1 DAB1 nsv472077 1 57997949 57997949 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012684 M 9 1 0 DAB1 NA18555 esv6090 1 58010553 58010730 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28531 M 1 0 0 DAB1 nsv472311 1 58026215 58026215 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015745 M 9 1 0 DAB1 NA18555 nsv829937 1 58030876 58179094 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446673 M 95 1 0 DAB1,DAB1-AS1 nsv977 1 58108324 58140510 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9983,nssv4236 M 9 2 0 DAB1 NA12878,NA18956 esv2641726 1 58115209 58116609 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5289869 M 1 0 1 DAB1 NA18507 esv7642 1 58115549 58116381 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30083 M 1 0 0 DAB1 esv2277330 1 58115624 58116326 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4899661 M 1 0 1 DAB1 NA18507 esv4838 1 58115760 58116237 CNV loss Wang_et_al_2008 18987735 Sequencing essv27279 M 1 0 1 DAB1 YH esv1002928 1 58115800 58116123 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585033 M 3 0 1 DAB1 HuRef esv1095459 1 58115811 58116135 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4204514 M 2 0 1 DAB1 HuRef nsv1008205 1 58121593 58147849 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477175 M 29084 1 0 DAB1 esv275018 1 58221472 58223044 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586114 M 1250 0 1 DAB1 esv2763625 1 58254509 58257052 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027880,essv7027891 M 1109 0 2 DAB1 SW_0890,SW_1195 nsv476142 1 58277188 58277188 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016774 M 9 1 0 DAB1 NA12878 nsv945969 1 58285838 58294800 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770720,nssv1770740,nssv1770737,nssv1770743,nssv1770794,nssv1770799,nssv1769793,nssv1770745,nssv1770724,nssv1770782,nssv1770785,nssv1770731,nssv1769791,nssv1770763,nssv1770732,nssv1770766,nssv1770739,nssv1770773,nssv1770726,nssv1770749,nssv1770736,nssv1770804,nssv1770729,nssv1770741,nssv1769794,nssv1770755,nssv1770789,nssv1770796,nssv1770793,nssv1770798,nssv1769792,nssv1770761,nssv1770790,nssv1770767,nssv1770723,nssv1770780,nssv1769788,nssv1770759,nssv1770787,nssv1770746,nssv1769785,nssv1770747,nssv1770786,nssv1770768,nssv1770730,nssv1770774,nssv1769795,nssv1770779,nssv1769790,nssv1770771,nssv1770725,nssv1770776,nssv1769789,nssv1770756,nssv1770722,nssv1770734,nssv1770728,nssv1770783,nssv1770721,nssv1770738,nssv1769787,nssv1770760,nssv1770791,nssv1770801,nssv1769786,nssv1770772,nssv1770727,nssv1770803,nssv1770792,nssv1769784,nssv1770788,nssv1770753,nssv1770758,nssv1770735,nssv1770762,nssv1770748,nssv1770797,nssv1770778,nssv1770764,nssv1770775,nssv1770754,nssv1770750,nssv1770800,nssv1770751,nssv1770802,nssv1770765,nssv1770770,nssv1770795,nssv1770769,nssv1770742,nssv1770777,nssv1770744,nssv1770757,nssv1770733,nssv1770784,nssv1770752,nssv1770781 M 97 10 0 DAB1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv527673 1 58298823 58304215 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704148 M 2026 0 1 DAB1 nsv475239 1 58304261 58304261 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019547 M 9 1 0 DAB1 NA19240 esv3409403 1 58312716 58312728 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863702 M 185 1 0 DAB1 NA12005 esv3450454 1 58336436 58336455 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594336 M 185 1 0 DAB1 NA11918 nsv525581 1 58355567 58370814 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701720 M 2026 0 1 DAB1 esv994666 1 58385034 58388147 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564289 M 3 0 1 DAB1 HuRef esv29351 1 58420019 58421694 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19339 M 40 0 1 DAB1 NA19190 nsv546307 1 58479699 58505638 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713485 M 17421 1 0 DAB1 nsv546308 1 58487015 58516087 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713486 M 17421 1 0 DAB1 nsv516742 1 58494898 58505638 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694369,nssv670576,nssv693252 M 2026 3 0 "" nsv546309 1 58494898 58514738 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713487 M 17421 1 0 "" esv2763935 1 58496146 58505914 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7027913,essv7027902 M 1109 2 0 "" SW_0165,SW_1245 esv3893590 1 58514738 58607979 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787116 M 3017 0 1 "" esv2608020 1 58515917 58518146 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5193686 M 1 0 1 "" NA18507 esv5903 1 58516230 58517638 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28344 M 1 0 0 "" nsv511693 1 58516235 58517532 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626333 M 1 0 1 "" 1 esv2231645 1 58516312 58517605 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4793742 M 1 0 1 "" NA18507 esv4344 1 58516462 58517525 CNV loss Wang_et_al_2008 18987735 Sequencing essv26785 M 1 0 1 "" YH nsv820077 1 58516483 58517588 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419172 M 2 1 0 "" AK1 nsv159018 1 58516498 58517410 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177596 M 24 "" dgv40n67 1 58516499 58517399 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822742,nsv822764 M 31 0 29 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 esv25175 1 58516499 58517399 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11744 M 40 6 0 "" NA12414,NA18517,NA19108,NA19129,NA19190,NA19225 nsv821363 1 58516499 58517399 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420325 M 1 0 1 "" NA10851 esv1489418 1 58516501 58517414 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4057198 M 2 0 1 "" HuRef dgv283n54 1 58516526 58517329 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546311,nsv546310 M 17421 0 3 "" nsv822753 1 58516576 58517130 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436338 M 31 0 1 "" NA18542 nsv511156 1 58516680 58517991 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626066 M 1 0 1 "" 1 nsv546312 1 58516731 58517329 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv713648,nssv714502,nssv714766,nssv715072,nssv713851,nssv714289,nssv713656,nssv714989,nssv713661,nssv714424,nssv715123,nssv714955,nssv714440,nssv714408,nssv715031,nssv715003,nssv714319,nssv714856,nssv715101,nssv714598,nssv714684,nssv714675,nssv715114,nssv714895,nssv714191,nssv714995,nssv713566,nssv714482,nssv715093,nssv714828,nssv715154,nssv715106,nssv714474,nssv715113,nssv713551,nssv713994,nssv715112,nssv714263,nssv714188,nssv714977,nssv714475,nssv714728,nssv715024,nssv714716,nssv713533,nssv714324,nssv715118,nssv714218,nssv713862,nssv715115,nssv714702,nssv715117,nssv714491,nssv715116,nssv715122,nssv714745,nssv715121,nssv715119,nssv714721,nssv714830,nssv713982,nssv713980,nssv714011,nssv713950,nssv713989,nssv713984,nssv715120,nssv713935,nssv714386,nssv713548,nssv715138,nssv715125,nssv714990,nssv714484,nssv715130,nssv714337,nssv714997,nssv715153,nssv715124,nssv714038,nssv713870,nssv713987,nssv715129,nssv714339,nssv714366,nssv715127,nssv715128,nssv715126,nssv714376,nssv714223,nssv714882,nssv715137,nssv713660,nssv715133,nssv714597,nssv713702,nssv713657,nssv715132,nssv715131,nssv714111,nssv714437,nssv715136,nssv714483,nssv713986,nssv713670,nssv715135,nssv714280,nssv714826,nssv715134,nssv714489,nssv714389,nssv713846,nssv714717,nssv714963,nssv713985,nssv714911,nssv715145,nssv713659,nssv715139,nssv715144,nssv714215,nssv714899,nssv714362,nssv714026,nssv715140,nssv714596,nssv715143,nssv715142,nssv714539,nssv715141,nssv714490,nssv713538,nssv715146,nssv715152,nssv714867,nssv714132,nssv715150,nssv715151,nssv714488,nssv714487,nssv714486,nssv715147,nssv714485,nssv715148,nssv715149,nssv715156,nssv714493,nssv714968,nssv714881,nssv714276,nssv715162,nssv713553,nssv714462,nssv714983,nssv715075,nssv714015,nssv715155,nssv714434,nssv715161,nssv715170,nssv715157,nssv715160,nssv715158,nssv715159,nssv715163,nssv714810,nssv714764,nssv714492,nssv715169,nssv714718,nssv714183,nssv714868,nssv713552,nssv713663,nssv714501,nssv715168,nssv715164,nssv714254,nssv715167,nssv715165,nssv715166,nssv714104,nssv714944,nssv715171,nssv714894,nssv715181,nssv713662,nssv714945,nssv714275,nssv713873,nssv713871,nssv714007,nssv714009,nssv715174,nssv715172,nssv715173,nssv715209,nssv715180,nssv714008,nssv713558,nssv714497,nssv714829,nssv714494,nssv715182,nssv714418,nssv714699,nssv715175,nssv714495,nssv714496,nssv715178,nssv715179,nssv715177,nssv715176,nssv714016,nssv715188,nssv714274,nssv714342,nssv715207,nssv715208,nssv715040,nssv715183,nssv714426,nssv714148,nssv714720,nssv713669,nssv714216,nssv715187,nssv715184,nssv715186,nssv715185,nssv713865,nssv714448,nssv715193,nssv714390,nssv713557,nssv713665,nssv715189,nssv714273,nssv714500,nssv715194,nssv713666,nssv715192,nssv715191,nssv714012,nssv714391,nssv714498,nssv715190,nssv714010,nssv713664,nssv714014,nssv714285,nssv714499,nssv714169,nssv714958,nssv715195,nssv713556,nssv714987,nssv715199,nssv715206,nssv715198,nssv714294,nssv714890,nssv714384,nssv714116,nssv714719,nssv713668,nssv714683,nssv715197,nssv715196,nssv713555,nssv714889,nssv715201,nssv714379,nssv714122,nssv714156,nssv715200,nssv715205,nssv714814,nssv714013,nssv715204,nssv714144,nssv713667,nssv714773,nssv713554,nssv715203,nssv714327,nssv715202,nssv714375,nssv714414,nssv714723,nssv714504,nssv713642,nssv714293,nssv714988,nssv715063,nssv713645,nssv715090,nssv713646,nssv714147,nssv714898,nssv715210,nssv713671,nssv715215,nssv713672,nssv715100,nssv714255,nssv714119,nssv714019,nssv715212,nssv715211,nssv715214,nssv714525,nssv715228,nssv714283,nssv715213,nssv713678,nssv714524,nssv713988,nssv715218,nssv714953,nssv714433,nssv714602,nssv714407,nssv714605,nssv714775,nssv714795,nssv713673,nssv714336,nssv714815,nssv713560,nssv714503,nssv715217,nssv715216,nssv715244,nssv713677,nssv715226,nssv714017,nssv713957,nssv715227,nssv715219,nssv714690,nssv715220,nssv715222,nssv713927,nssv715221,nssv714447,nssv715223,nssv715224,nssv715225,nssv713675,nssv713674,nssv714262,nssv713914,nssv713676,nssv715061,nssv714411,nssv713565,nssv714423,nssv713680,nssv714290,nssv714321,nssv713679,nssv714195,nssv714844,nssv713644,nssv714025,nssv713681,nssv715232,nssv715237,nssv715236,nssv715231,nssv713682,nssv713683,nssv714601,nssv714430,nssv713559,nssv715230,nssv714833,nssv715229,nssv714505,nssv714722,nssv714018,nssv714258,nssv714510,nssv715235,nssv715233,nssv714163,nssv715234,nssv714922,nssv714161,nssv713531,nssv715000,nssv713685,nssv714998,nssv715001,nssv715238,nssv714509,nssv715240,nssv714164,nssv714865,nssv714600,nssv715239,nssv714705,nssv714784,nssv715243,nssv714872,nssv713684,nssv713686,nssv713687,nssv714599,nssv714421,nssv714507,nssv715242,nssv714508,nssv715241,nssv714506,nssv714888,nssv714857,nssv714168,nssv713526,nssv713878,nssv714696,nssv715248,nssv715030,nssv714973,nssv714446,nssv714103,nssv714136,nssv715247,nssv715099,nssv713564,nssv713872,nssv714185,nssv715245,nssv715246,nssv714024,nssv714758,nssv715251,nssv714871,nssv714831,nssv714726,nssv714166,nssv714292,nssv714445,nssv714514,nssv713693,nssv713845,nssv715249,nssv715250,nssv713700,nssv714523,nssv714021,nssv714392,nssv714291,nssv71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ssv714613,nssv714041,nssv713891,nssv713932,nssv714298,nssv714393,nssv714454,nssv714903,nssv713754,nssv714297,nssv714296,nssv714962,nssv714993,nssv714260,nssv713753,nssv714959,nssv714612,nssv714205,nssv713593,nssv714369,nssv715066,nssv714044,nssv714615,nssv714123,nssv713592,nssv714246,nssv714590,nssv714133,nssv714589,nssv715067,nssv713755,nssv714592,nssv714235,nssv713756,nssv714208,nssv713890,nssv714042,nssv714780,nssv713591,nssv713916,nssv713889,nssv714741,nssv714591,nssv714046,nssv714109,nssv714043,nssv715005,nssv714377,nssv713544,nssv714976,nssv714939,nssv715111,nssv714710,nssv713899,nssv714617,nssv714986,nssv714540,nssv713907,nssv714397,nssv714227,nssv715108,nssv714120,nssv715098,nssv713766,nssv713863,nssv714459,nssv714757,nssv714114,nssv713981,nssv714317,nssv713598,nssv714234,nssv714943,nssv714243,nssv714941,nssv714176,nssv714854,nssv714357,nssv714678,nssv714420,nssv714847,nssv714957,nssv714461,nssv713652,nssv713539,nssv714463,nssv714747,nssv714481,nssv713965,nssv714160,nssv714820,nssv714808,nssv714272,nssv714210,nssv714553,nssv714477,nssv713608,nssv713528,nssv714774,nssv713953,nssv714546,nssv713534,nssv713983,nssv714575,nssv714145,nssv714787,nssv714542,nssv714226,nssv714162,nssv713658,nssv714851,nssv714304,nssv713898,nssv713550,nssv714642,nssv714197,nssv714866,nssv714936,nssv714984,nssv713867,nssv714618,nssv714809,nssv714932,nssv714361,nssv714052,nssv713761,nssv714056,nssv713764,nssv713996,nssv714942,nssv714261,nssv714619,nssv714051,nssv714695,nssv714915,nssv714050,nssv713864,nssv713928,nssv713762,nssv713876,nssv713799,nssv714177,nssv713860,nssv713763,nssv713924,nssv714907,nssv713779,nssv714541,nssv714006,nssv714000,nssv713765,nssv714049,nssv713995,nssv713769,nssv713896,nssv714848,nssv714544,nssv713532,nssv715060,nssv714182,nssv714628,nssv714691,nssv714458,nssv713900,nssv714622,nssv715097,nssv714840,nssv714545,nssv714746,nssv714287,nssv714416,nssv713948,nssv714785,nssv714441,nssv713607,nssv713601,nssv714621,nssv714950,nssv714543,nssv713600,nssv714970,nssv713767,nssv714887,nssv714620,nssv714055,nssv714373,nssv713897,nssv714627,nssv714935,nssv713599,nssv714460,nssv714838,nssv713922,nssv713778,nssv714417,nssv714101,nssv713768,nssv715010,nssv713936,nssv713772,nssv715004,nssv713938,nssv713606,nssv713770,nssv714054,nssv713602,nssv714996,nssv713771,nssv714925,nssv714777,nssv713895,nssv715096,nssv715022,nssv713937,nssv714313,nssv714315,nssv714934,nssv714345,nssv713777,nssv714372,nssv714457,nssv714893,nssv714883,nssv714824,nssv715070,nssv714827,nssv714284,nssv714625,nssv713603,nssv714626,nssv714792,nssv713773,nssv713605,nssv714444,nssv713774,nssv713776,nssv713929,nssv713604,nssv713775,nssv714271,nssv714715,nssv714053,nssv714624,nssv714623,nssv714105,nssv714194,nssv713844,nssv714762,nssv714636,nssv715076,nssv714365,nssv713949,nssv715027,nssv715038,nssv715009,nssv714974,nssv714870,nssv713857,nssv713941,nssv714930,nssv714823,nssv715107,nssv714250,nssv713997,nssv713964,nssv715026,nssv713617,nssv714547,nssv714332,nssv714630,nssv714323,nssv715006,nssv714228,nssv714355,nssv713958,nssv713783,nssv714982,nssv714801,nssv714629,nssv714371,nssv714062,nssv714786,nssv714325,nssv713542,nssv713496,nssv714057,nssv714861,nssv714938,nssv713798,nssv714438,nssv714552,nssv714256,nssv714985,nssv714149,nssv714641,nssv714476,nssv714548,nssv714387,nssv713609,nssv713999,nssv713611,nssv714923,nssv714906,nssv714751,nssv715029,nssv714969,nssv714413,nssv713913,nssv714632,nssv714074,nssv714259,nssv714635,nssv714750,nssv714772,nssv714631,nssv713647,nssv714059,nssv713902,nssv714800,nssv713780,nssv714058,nssv714431,nssv713612,nssv713852,nssv713939,nssv713859,nssv714912,nssv713610,nssv713906,nssv714634,nssv714066,nssv714267,nssv714209,nssv714846,nssv713901,nssv714067,nssv714061,nssv714704,nssv713782,nssv714855,nssv714910,nssv713781,nssv714060,nssv714633,nssv714381,nssv714852,nssv714363,nssv715074,nssv714211,nssv714348,nssv715045,nssv714142,nssv714842,nssv713784,nssv714178,nssv714115,nssv715079,nssv714203,nssv714075,nssv714358,nssv713615,nssv713616,nssv713495,nssv713905,nssv714065,nssv714330,nssv714799,nssv715008,nssv714179,nssv714971,nssv714303,nssv713494,nssv714232,nssv713947,nssv714252,nssv714436,nssv714302,nssv714770,nssv714749,nssv714905,nssv713525,nssv713613,nssv714333,nssv713614,nssv714245,nssv714344,nssv714551,nssv714839,nssv713940,nssv714748,nssv715064,nssv713797,nssv713786,nssv713853,nssv715007,nssv713904,nssv713521,nssv713796,nssv714063,nssv713790,nssv714359,nssv714121,nssv713785,nssv714549,nssv714904,nssv713789,nssv714964,nssv713788,nssv714072,nssv714064,nssv714640,nssv714550,nssv713787,nssv713998,nssv714380,nssv714404,nssv714217,nssv715044,nssv715046,nssv713903,nssv713795,nssv713492,nssv714073,nssv714388,nssv714638,nssv714071,nssv714069,nssv715025,nssv713493,nssv714070,nssv713491,nssv714189,nssv714806,nssv714797,nssv714152,nssv714639,nssv714068,nssv714682,nssv713792,nssv714637,nssv713791,nssv714933,nssv713794,nssv713793,nssv713979,nssv713498,nssv713801,nssv714886,nssv714965,nssv714401,nssv714314,nssv714909,nssv714343,nssv715088,nssv713619,nssv713816,nssv714864,nssv715082,nssv715042,nssv714554,nssv714685,nssv714471,nssv714001,nssv713641,nssv713497,nssv713523,nssv715110,nssv714419,nssv713643,nssv713505,nssv714672,nssv713631,nssv713524,nssv713800,nssv714181,nssv714077,nssv713618,nssv714817,nssv714914,nssv714560,nssv714769,nssv714224,nssv714556,nssv714646,nssv714822,nssv713978,nssv713549,nssv713651,nssv713858,nssv714752,nssv713527,nssv714480,nssv714078,nssv713501,nssv713975,nssv714473,nssv714645,nssv714190,nssv714150,nssv714002,nssv715041,nssv715037,nssv714713,nssv715011,nssv714980,nssv714085,nssv714076,nssv714679,nssv713946,nssv713921,nssv714967,nssv715021,nssv713623,nssv714671,nssv713624,nssv713952,nssv714979,nssv713804,nssv713500,nssv714841,nssv714409,nssv714354,nssv713805,nssv714920,nssv714467,nssv714869,nssv714892,nssv714126,nssv714555,nssv713622,nssv713802,nssv713803,nssv714005,nssv713621,nssv714312,nssv714789,nssv714383,nssv713499,nssv714643,nssv714703,nssv714574,nssv714100,nssv714137,nssv713620,nssv714644,nssv714331,nssv715057,nssv713504,nssv714118,nssv714791,nssv715056,nssv714647,nssv713869,nssv713630,nssv713808,nssv715078,nssv713966,nssv714141,nssv714654,nssv714079,nssv714412,nssv714466,nssv714282,nssv714655,nssv714107,nssv714248,nssv714443,nssv714187,nssv713626,nssv715016,nssv713627,nssv714954,nssv713640,nssv714080,nssv713918,nssv714853,nssv713854,nssv714087,nssv715015,nssv713971,nssv714694,nssv714435,nssv713807,nssv713806,nssv714559,nssv713912,nssv714845,nssv714756,nssv715012,nssv714850,nssv713868,nssv713967,nssv714928,nssv714429,nssv713625,nssv714346,nssv713815,nssv714557,nssv714677,nssv715028,nssv714765,nssv713866,nssv713814,nssv715014,nssv713628,nssv713810,nssv713629,nssv713956,nssv714364,nssv714083,nssv714130,nssv714157,nssv713809,nssv714771,nssv714788,nssv714753,nssv714649,nssv714265,nssv714382,nssv713909,nssv714648,nssv714129,nssv714558,nssv714242,nssv714112,nssv714082,nssv713503,nssv713502,nssv715013,nssv714653,nssv714229,nssv714249,nssv714081,nssv714305,nssv713813,nssv714084,nssv714652,nssv714221,nssv713811,nssv713812,nssv714650,nssv714086,nssv714651,nssv713843,nssv713908,nssv714700,nssv714562,nssv714308,nssv714410,nssv715087,nssv713522,nssv714328,nssv714663,nssv714573,nssv713951,nssv713520,nssv714442,nssv713842,nssv713639,nssv715069,nssv714201,nssv715109,nssv714565,nssv714320,nssv714279,nssv713509,nssv713827,nssv713911,nssv713545,nssv714966,nssv713945,nssv713817,nssv714270,nssv713819,nssv713856,nssv714849,nssv713972,nssv714812,nssv714561,nssv714657,nssv714656,nssv714092,nssv713820,nssv715017,nssv713970,nssv713818,nssv714278,nssv714088,nssv713976,nssv714004,nssv714472,nssv714951,nssv713919,nssv714563,nssv714693,nssv715055,nssv714821,nssv714353,nssv714676,nssv715020,nssv713519,nssv714128,nssv714099,nssv714155,nssv714564,nssv713822,nssv714804,nssv714239,nssv714090,nssv714660,nssv714306,nssv714097,nssv714662,nssv714754,nssv714238,nssv714428,nssv714311,nssv713508,nssv714659,nssv714658,nssv714089,nssv714670,nssv713821,nssv713855,nssv714712,nssv713540,nssv714269,nssv714425,nssv715047,nssv714811,nssv714813,nssv714102,nssv713920,nssv715054,nssv713825,nssv714802,nssv713826,nssv714307,nssv714198,nssv714913,nssv714790,nssv713507,nssv714230,nssv714796,nssv713824,nssv714117,nssv714098,nssv714661,nssv714978,nssv714374,nssv713942,nssv714674,nssv714673,nssv714266,nssv713823,nssv714399,nssv714091,nssv713506,nssv713828,nssv713632,nssv715091,nssv715084,nssv714400,nssv715068,nssv714884,nssv714669,nssv713514,nssv714237,nssv714095,nssv714151,nssv714096,nssv714158,nssv713831,nssv713541,nssv714908,nssv715053,nssv713944,nssv714692,nssv713638,nssv714138,nssv714859,nssv714310,nssv714568,nssv714470,nssv714422,nssv713633,nssv714767,nssv715019,nssv714340,nssv715036,nssv715035,nssv714665,nssv714664,nssv714885,nssv714567,nssv714140,nssv713830,nssv713510,nssv713943,nssv714858,nssv713829,nssv713910,nssv714566,nssv715034,nssv713512,nssv713954,nssv714326,nssv714572,nssv713511,nssv714316,nssv713513,nssv713840,nssv714127,nssv715018,nssv714805,nssv714768,nssv713968,nssv713637,nssv713518,nssv713832,nssv713833,nssv715083,nssv714931,nssv714668,nssv714468,nssv713841,nssv713517,nssv714803,nssv714816,nssv714193,nssv714469,nssv714571,nssv714094,nssv714309,nssv713634,nssv713834,nssv714711,nssv714975,nssv714667,nssv713955,nssv713516,nssv714003,nssv714570,nssv715039,nssv714432,nssv714180,nssv713636,nssv714093,nssv714241,nssv714398,nssv714755,nssv713515,nssv714891,nssv713836,nssv713839,nssv714231,nssv713635,nssv713835,nssv713837,nssv714569,nssv714666,nssv713969,nssv713838,nssv714318 M 17421 4 1769 "" nsv546313 1 58516782 58517329 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715264 M 17421 1 0 "" nsv988 1 58545211 58556599 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9172 M 9 1 0 "" NA12156 esv3443645 1 58550103 58550127 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899023,essv8899021,essv8899022,essv8899024 M 185 4 0 "" NA18519,NA18856,NA18907,NA19138 nsv818178 1 58568421 58575196 CNV loss Wang_et_al_2007 17921354 SNP array nssv1415560 M 112 0 1 "" NA06993 nsv1010188 1 58575075 58609600 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701233 M 29084 1 0 "" nsv829948 1 58576269 58743968 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446684 M 95 1 0 OMA1 nsv999 1 58591602 58622358 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9989 M 9 1 0 "" NA18956 nsv517087 1 58606346 58606499 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv686889,nssv653763 M 2026 0 2 "" nsv546314 1 58688212 58708972 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715265 M 17421 0 1 "" nsv1003930 1 58703032 58929626 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467107 M 29084 1 0 MYSM1,OMA1,TACSTD2 nsv998092 1 58750915 58774907 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465844 M 29084 0 1 OMA1 nsv474453 1 58767030 58767030 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012447 M 9 1 0 OMA1 NA18956 esv5120 1 58832143 58832708 CNV loss Wang_et_al_2008 18987735 Sequencing essv27561 M 1 0 1 "" YH esv1641689 1 58832222 58832547 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3861493 M 2 0 1 "" HuRef nsv1010 1 58845913 58879811 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2955 M 9 1 0 "" NA18555 nsv945971 1 58868283 58869756 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1768191,nssv1770814,nssv1768200,nssv1770816,nssv1768186,nssv1768164,nssv1768184,nssv1768213,nssv1768175,nssv1768212,nssv1768203,nssv1768218,nssv1768224,nssv1770820,nssv1768220,nssv1768214,nssv1768207,nssv1770827,nssv1768187,nssv1768215,nssv1768190,nssv1768211,nssv1770830,nssv1768161,nssv1768179,nssv1768217,nssv1768174,nssv1770812,nssv1768195,nssv1768162,nssv1768208,nssv1770823,nssv1768176,nssv1770807,nssv1768172,nssv1770826,nssv1768202,nssv1768219,nssv1768166,nssv1768210,nssv1768165,nssv1768216,nssv1768159,nssv1770829,nssv1768205,nssv1770809,nssv1768182,nssv1770808,nssv1768223,nssv1770810,nssv1768177,nssv1770811,nssv1768185,nssv1770815,nssv1768209,nssv1770825,nssv1768163,nssv1770819,nssv1768204,nssv1770822,nssv1770805,nssv1770813,nssv1768171,nssv1770806,nssv1768173,nssv1770818,nssv1768167,nssv1770817,nssv1768222,nssv1770821,nssv1768160,nssv1770824,nssv1768169,nssv1768170,nssv1768199,nssv1768227,nssv1768193,nssv1768181,nssv1768188,nssv1768198,nssv1768180,nssv1768189,nssv1768178,nssv1768196,nssv1768226,nssv1768183,nssv1770828,nssv1768221,nssv1768228,nssv1768192,nssv1768168,nssv1768194,nssv1768197,nssv1768201,nssv1768225,nssv1768206,nssv1768229 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv820181 1 58913802 58915189 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419252 M 2 0 1 MYSM1 AK1 dgv41n67 1 58927955 58928701 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822786,nsv822797,nsv822775,nsv822810 M 31 4 0 MYSM1 AK14,AK16,AK6,NA18951 dgv42n67 1 58927955 58929177 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822821,nsv822832,nsv822843,nsv822854 M 31 13 0 MYSM1 AK18,AK2,AK4,NA18526,NA18537,NA18542,NA18564,NA18566,NA18592,NA18949,NA18969,NA18997,NA18999 dgv43n67 1 58927955 58929392 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822865,nsv822876 M 31 8 0 MYSM1 AK20,AK8,NA18547,NA18552,NA18570,NA18942,NA18947,NA18972 nsv819698 1 58927985 58929843 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419344 M 2 1 0 MYSM1 AK1 esv3360957 1 58946450 58947597 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652092 M 185 1 0 "" NA19240 nsv1021 1 58964095 58997765 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5590 M 9 1 0 "" NA19129 esv2572403 1 58965977 58969173 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5264945 M 1 0 1 "" NA18507 esv1263464 1 58967575 58967635 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4236398 M 2 0 1 "" HuRef esv1401011 1 58967853 58967853 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3728293 M 2 1 0 "" HuRef esv3436296 1 58977885 58977899 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899043,essv8899042,essv8899046,essv8899051,essv8899028,essv8899047,essv8899034,essv8899039,essv8899040,essv8899027,essv8899025,essv8899033,essv8899050,essv8899031,essv8899036,essv8899035,essv8899044,essv8899049,essv8899030,essv8899045,essv8899032,essv8899038,essv8899041,essv8899029 M 185 24 0 "" NA07000,NA07051,NA10847,NA11920,NA11992,NA11994,NA12154,NA12249,NA12287,NA18501,NA18517,NA18520,NA18542,NA18552,NA18561,NA18576,NA18582,NA18856,NA18916,NA18945,NA18965,NA19114,NA19129,NA19190 esv26947 1 59019839 59022982 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12569 M 40 0 1 JUN NA12156 nsv546315 1 59021619 59022524 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715267,nssv715266,nssv715268 M 17421 0 3 JUN nsv1005354 1 59056160 59308400 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473533 M 29084 1 0 LINC01135 nsv1014087 1 59058894 59106981 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478069 M 29084 1 0 LINC01135 esv3420573 1 59111160 59111174 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863703 M 185 1 0 LINC01135 NA12005 nsv829959 1 59112918 59275673 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446740,nssv1446728,nssv1446795,nssv1446751,nssv1446784,nssv1446695,nssv1446717,nssv1446706,nssv1446762,nssv1446773 M 95 10 0 LINC01135 nsv546316 1 59141535 59230403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715269 M 17421 0 1 "" esv2289458 1 59219286 59219715 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4624915 M 1 0 1 "" NA18507 esv5180 1 59219337 59219642 CNV loss Wang_et_al_2008 18987735 Sequencing essv27621 M 1 0 1 "" YH esv1001193 1 59219370 59219517 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575113 M 3 0 1 "" HuRef esv1027809 1 59219390 59219538 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3838410 M 2 0 1 "" HuRef nsv475297 1 59224233 59224233 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011626 M 9 1 0 "" NA19240 nsv945972 1 59233221 59241923 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769238,nssv1769246,nssv1769183,nssv1769243,nssv1768233,nssv1769180,nssv1768231,nssv1769212,nssv1769185,nssv1769227,nssv1769231,nssv1769217,nssv1768245,nssv1769192,nssv1768248,nssv1769245,nssv1768244,nssv1769221,nssv1769240,nssv1768253,nssv1769182,nssv1769249,nssv1768238,nssv1769247,nssv1769233,nssv1769206,nssv1769232,nssv1769209,nssv1768234,nssv1769214,nssv1768236,nssv1769196,nssv1768252,nssv1769203,nssv1768232,nssv1769193,nssv1768254,nssv1769225,nssv1768250,nssv1769198,nssv1768247,nssv1769223,nssv1768243,nssv1769215,nssv1768235,nssv1769224,nssv1769236,nssv1769216,nssv1768246,nssv1769184,nssv1769239,nssv1769210,nssv1769237,nssv1769219,nssv1768237,nssv1769228,nssv1768239,nssv1769189,nssv1768249,nssv1768255,nssv1769234,nssv1769218,nssv1768251,nssv1769250,nssv1768242,nssv1769197,nssv1769235,nssv1769211,nssv1768240,nssv1769199,nssv1768241,nssv1769248,nssv1769229,nssv1769205,nssv1769208,nssv1769241,nssv1769207,nssv1769242,nssv1769244,nssv1769194,nssv1769230,nssv1769200,nssv1769181,nssv1769201,nssv1769213,nssv1769202,nssv1769191,nssv1769204,nssv1769190,nssv1769220,nssv1769226,nssv1768230,nssv1769187,nssv1769188,nssv1769186,nssv1769222,nssv1769195 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv829970 1 59319690 59483749 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446806 M 95 1 0 HSD52 esv3429129 1 59364045 59364064 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594380,essv9594391,essv9594402,essv9594369 M 185 4 0 "" NA11840,NA12045,NA12287,NA12814 esv3444179 1 59364051 59364071 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674049,essv8674048 M 185 2 0 "" NA12878,NA12891 esv3304945 1 59364054 59364055 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7771744,essv7803941,essv7828562,essv7778361,essv7803200,essv7775156,essv7785421,essv7825557,essv7772572,essv7815841,essv7819391,essv7795479,essv7776168,essv7786198,essv7789238,essv7797069,essv7834086,essv7789959,essv7808996,essv7835593,essv7802434,essv7807998,essv7805169,essv7782956,essv7827281,essv7787136,essv7794186,essv7815199,essv7813251,essv7791854,essv7771690,essv7779842,essv7796328,essv7797908,essv7770695,essv7807098,essv7812407,essv7833759,essv7780871,essv7806272 M 185 40 0 "" NA07037,NA07051,NA07357,NA10847,NA10851,NA11831,NA11840,NA11894,NA11920,NA12044,NA12045,NA12144,NA12154,NA12155,NA12287,NA12414,NA12749,NA12761,NA12776,NA12814,NA12815,NA12878,NA12891,NA18498,NA18499,NA18502,NA18504,NA18519,NA18550,NA18561,NA18573,NA18605,NA18856,NA18861,NA18870,NA18916,NA19005,NA19129,NA19190,NA19225 esv3371002 1 59364055 59364068 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899085,essv8899080,essv8899061,essv8899082,essv8899069,essv8899067,essv8899060,essv8899062,essv8899086,essv8899064,essv8899071,essv8899083,essv8899057,essv8899063,essv8899077,essv8899084,essv8899072,essv8899053,essv8899055,essv8899054,essv8899087,essv8899056,essv8899074,essv8899066,essv8899058,essv8899079,essv8899052,essv8899073,essv8899065,essv8899068,essv8899075,essv8899076,essv8899078,essv8899088 M 185 34 0 "" NA07037,NA07051,NA07357,NA10847,NA10851,NA11831,NA11894,NA11920,NA12044,NA12045,NA12144,NA12154,NA12155,NA12414,NA12749,NA12761,NA12776,NA18498,NA18499,NA18502,NA18504,NA18519,NA18550,NA18561,NA18573,NA18605,NA18856,NA18861,NA18870,NA18916,NA19005,NA19129,NA19190,NA19225 esv3425380 1 59416673 59416683 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863704 M 185 1 0 "" NA12005 nsv1032 1 59483689 59528773 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9179 M 9 0 1 "" NA12156 nsv829982 1 59485436 59605380 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446817 M 95 0 1 FGGY nsv472693 1 59540398 59540398 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012982 M 9 1 0 FGGY NA18555 esv1430411 1 59729301 59729301 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3651202 M 2 1 0 FGGY HuRef nsv461639 1 59747958 59843977 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538007 M 1557 0 1 FGGY HGDP01171 nsv546317 1 59747958 59843977 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173001 M 17421 0 1 FGGY HGDP01171 nsv1009268 1 59760406 59830855 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467394 M 29084 0 1 FGGY nsv523577 1 59765574 59843977 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699363 M 2026 0 1 FGGY dgv168n100 1 59777180 59830855 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000043,nsv1010742,nsv1010341,nsv1014113,nsv1008717 M 29084 0 19 FGGY nsv1012848 1 59777180 59893378 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701239 M 29084 0 1 FGGY esv2763521 1 59777192 59824654 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027924,essv7027935,essv7027946 M 1109 0 3 FGGY SW_0165,SW_1121,SW_1398 nsv1043 1 59799705 59844580 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9187 M 9 0 1 FGGY NA12156 esv2421406 1 59816510 59830867 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5060972,essv5103035,essv5048253,essv5109864,essv5066842,essv5017433,essv5120070,essv5103864,essv5137789,essv5078694,essv5098890,essv5054474,essv5060169,essv5115475,essv5021978,essv5136841,essv5011633,essv5053200,essv5038835,essv5065377,essv5126515,essv5060096,essv5063136,essv5041917,essv5039434,essv5158322,essv5139519,essv5149511,essv5129341,essv5122235,essv5087514,essv5028615,essv5085406,essv5049830,essv5103220,essv5150614,essv5061577,essv5153361,essv5079202,essv5130173,essv5087946,essv5097353,essv5020151,essv5036975,essv5078871,essv5009372,essv5053666,essv5040550,essv5032236,essv5159584,essv5129886,essv5020452,essv5103155,essv5114575,essv5051229,essv5005275,essv5054047,essv5091329,essv5121507,essv5096990,essv5028079,essv5135853,essv5124457,essv5044839,essv5092760,essv5031374,essv5021553,essv5041519,essv5003480,essv5045441,essv5049082,essv5144502,essv5088344,essv5060569,essv5056501,essv5067428,essv5080174,essv5132707,essv5130525,essv5109585,essv5103948,essv5113121,essv5040584,essv5103560,essv5134318,essv5115967,essv5157461,essv5017970,essv5058318,essv5099289,essv5087237,essv5154431,essv5063892,essv5070187,essv5118877,essv5068132,essv5043644,essv5074004,essv5065636,essv5155309,essv5049821,essv5066027,essv5044255,essv5065775,essv5022439,essv5091848,essv5055954,essv5119898,essv5105946,essv5056547,essv5045282,essv5099583,essv5023539,essv5027230,essv5119858,essv5024755,essv5096985,essv5112933,essv5031687,essv5059035,essv5038259,essv5004870,essv5054403,essv5120685,essv5027088,essv5057642,essv5019130,essv5015016,essv5100443,essv5055366,essv5033434,essv5147049,essv5118931,essv5086182,essv5035130,essv5108757,essv5002820,essv5084190,essv5047791,essv5155732,essv5082473,essv5088404,essv5048759,essv5113893,essv5132781,essv5028202,essv5036213,essv5117768,essv5099242,essv5039137,essv5072761,essv5036591,essv5134301,essv5034332,essv5094505,essv5158907,essv5071340,essv5009759,essv5090086,essv5045547,essv5041049 M 1184 0 161 FGGY NA11893,NA11994,NA12156,NA12763,NA12828,NA18500,NA18505,NA18520,NA18626,NA18853,NA18855,NA18859,NA18873,NA18909,NA18912,NA18914,NA18930,NA18933,NA18946,NA18955,NA18956,NA18965,NA18969,NA18978,NA19009,NA19038,NA19062,NA19063,NA19087,NA19096,NA19098,NA19102,NA19117,NA19119,NA19121,NA19123,NA19127,NA19130,NA19132,NA19138,NA19139,NA19172,NA19184,NA19193,NA19201,NA19210,NA19221,NA19222,NA19226,NA19238,NA19248,NA19318,NA19327,NA19347,NA19350,NA19371,NA19377,NA19379,NA19381,NA19382,NA19394,NA19403,NA19428,NA19430,NA19431,NA19455,NA19456,NA19470,NA19472,NA19649,NA19650,NA19708,NA19711,NA19714,NA19746,NA19762,NA19763,NA19782,NA19784,NA19788,NA19818,NA19828,NA19909,NA19919,NA20126,NA20127,NA20128,NA20287,NA20291,NA20292,NA20294,NA20295,NA20319,NA20344,NA20345,NA20347,NA20349,NA20350,NA20357,NA20359,NA20360,NA20527,NA20543,NA20769,NA20775,NA20786,NA20787,NA20849,NA20869,NA20872,NA20875,NA20877,NA20891,NA20902,NA20911,NA21091,NA21107,NA21115,NA21300,NA21303,NA21311,NA21313,NA21317,NA21333,NA21339,NA21352,NA21362,NA21371,NA21378,NA21379,NA21382,NA21400,NA21418,NA21421,NA21424,NA21425,NA21436,NA21441,NA21442,NA21451,NA21485,NA21491,NA21493,NA21494,NA21513,NA21514,NA21517,NA21520,NA21522,NA21574,NA21575,NA21580,NA21596,NA21599,NA21611,NA21613,NA21648,NA21683,NA21686,NA21784,NA21825 nsv441695 1 59816510 59830867 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656669,nssv1656670 M 270 0 2 FGGY NA19119,NA19238 nsv822887 1 59819298 59822406 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440813,nssv1425500 M 31 0 2 FGGY AK4,NA18969 esv28159 1 59819319 59824956 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19156,esv11834,esv10585 M 40 0 16 FGGY NA11931,NA12004,NA12006,NA12044,NA12156,NA12828,NA12878,NA18502,NA18523,NA18907,NA18909,NA18916,NA19114,NA19147,NA19190,NA19225 dgv284n54 1 59819979 59822279 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546321,nsv546318,nsv546323,nsv546319,nsv546322,nsv546320 M 17421 0 12 FGGY esv994342 1 59821214 59822246 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586465 M 3 0 1 FGGY HuRef dgv44n67 1 59821250 59822406 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822898,nsv822909 M 31 0 8 FGGY AK10,AK18,AK6,NA18526,NA18542,NA18564,NA18582,NA18949 esv1008172 1 59821250 59824986 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586958 M 3 0 1 FGGY HuRef dgv285n54 1 59821282 59822001 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546334,nsv546326,nsv546327,nsv546324,nsv546325,nsv546335,nsv546340 M 17421 0 18 FGGY dgv286n54 1 59821282 59822167 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546336,nsv546337,nsv546342,nsv546328,nsv546329,nsv546341 M 17421 0 26 FGGY dgv287n54 1 59821282 59822279 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546330,nsv546343,nsv546347,nsv546338,nsv546348,nsv546346 M 17421 0 116 FGGY dgv288n54 1 59821282 59822449 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546344,nsv546339,nsv546331 M 17421 0 7 FGGY dgv289n54 1 59821282 59823209 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546332,nsv546345,nsv546333 M 17421 0 3 FGGY nsv822921 1 59821338 59824986 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423118 M 31 0 1 FGGY NA18999 nsv546349 1 59821599 59822279 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715455,nssv715453,nssv715452,nssv715454,nssv715456,nssv715457 M 17421 0 6 FGGY dgv290n54 1 59822279 59824863 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546352,nsv546350 M 17421 0 2 FGGY dgv291n54 1 59822449 59824186 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546354,nsv546351 M 17421 0 3 FGGY dgv292n54 1 59822449 59824863 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546357,nsv546353 M 17421 4 6 FGGY dgv293n54 1 59822613 59831723 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546363,nsv546355 M 17421 0 2 FGGY dgv294n54 1 59822737 59824863 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546356,nsv546358,nsv546361,nsv546360,nsv546359 M 17421 0 5 FGGY nsv546362 1 59823382 59824863 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715479 M 17421 0 1 FGGY nsv819226 1 59878705 59879763 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419163 M 2 1 0 FGGY AK1 nsv820893 1 59878725 59879912 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420336 M 1 0 1 FGGY NA10851 esv22806 1 59878829 59879691 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18842 M 40 32 0 FGGY NA06985,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510,NA18508,NA18511,NA18517,NA18858,NA18907,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 dgv45n67 1 59878829 59879912 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822932,nsv822943 M 31 22 0 FGGY AK12,AK14,AK18,AK2,AK4,AK6,AK8,NA18526,NA18537,NA18547,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18951,NA18968,NA18969,NA18972,NA18999 dgv295n54 1 59878857 59879628 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546366,nsv546365,nsv546364 M 17421 0 21 FGGY nsv546367 1 59878908 59882041 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715502 M 17421 0 1 FGGY nsv546368 1 59879144 59879628 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715503 M 17421 0 1 FGGY nsv829993 1 59901614 59924564 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446839,nssv1446862,nssv1446828,nssv1446851 M 95 0 4 FGGY esv3345588 1 59925894 59925909 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863705 M 185 1 0 FGGY NA12005 nsv1012703 1 60034930 60135744 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474607 M 29084 1 0 CYP2J2,HOOK1 nsv477576 1 60060914 60060914 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015962 M 9 1 0 HOOK1 NA18517 nsv819901 1 60081647 60085454 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419579 M 2 0 1 HOOK1 AK1 nsv1013226 1 60205664 60373533 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474726 M 29084 1 0 C1orf87 nsv478542 1 60232246 60232246 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012761 M 9 1 0 C1orf87 NA18507 dgv98e59 1 60236442 60236684 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302689,esv3302735 M 185 36 0 C1orf87 NA07051,NA07347,NA11920,NA12249,NA12414,NA12763,NA18489,NA18501,NA18523,NA18532,NA18545,NA18547,NA18555,NA18564,NA18566,NA18570,NA18577,NA18593,NA18603,NA18856,NA18907,NA18912,NA18940,NA18944,NA18945,NA18949,NA18951,NA18959,NA18961,NA18965,NA18980,NA19005,NA19099,NA19129,NA19239,NA19240 esv3438840 1 60236456 60236665 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670897,essv8670898 M 185 2 0 C1orf87 NA19239,NA19240 esv3372359 1 60243182 60243193 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899140,essv8899150,essv8899149,essv8899153,essv8899138,essv8899136,essv8899145,essv8899144,essv8899134,essv8899143,essv8899139,essv8899146,essv8899133,essv8899152,essv8899135,essv8899151,essv8899142,essv8899147,essv8899141 M 185 19 0 C1orf87 NA07037,NA07051,NA07347,NA11831,NA11920,NA12763,NA12776,NA12828,NA18555,NA18563,NA18570,NA18577,NA18603,NA18638,NA18940,NA18951,NA18959,NA18960,NA18961 esv3306878 1 60243184 60243185 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7756606,essv7760941,essv7761142,essv7760535,essv7740309,essv7752543,essv7743639,essv7753039,essv7745225,essv7742588,essv7752304,essv7740673,essv7743778,essv7753786,essv7740765,essv7762437,essv7760810,essv7753269,essv7745674 M 185 19 0 C1orf87 NA07037,NA07051,NA07347,NA11831,NA11920,NA12763,NA12776,NA12828,NA18555,NA18563,NA18570,NA18577,NA18603,NA18638,NA18940,NA18951,NA18959,NA18960,NA18961 esv1587281 1 60303273 60303273 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3940777 M 2 1 0 C1orf87 HuRef esv1751925 1 60324201 60324201 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3590402 M 2 1 0 "" HuRef nsv945973 1 60335716 60336216 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769263,nssv1769293,nssv1769265,nssv1769319,nssv1769335,nssv1769292,nssv1769258,nssv1769326,nssv1769271,nssv1769344,nssv1769332,nssv1769287,nssv1769279,nssv1769317,nssv1769257,nssv1769341,nssv1769333,nssv1769285,nssv1769269,nssv1769283,nssv1769336,nssv1769318,nssv1769254,nssv1769324,nssv1769330,nssv1769281,nssv1769329,nssv1769284,nssv1769282,nssv1769289,nssv1769252,nssv1769297,nssv1769337,nssv1769274,nssv1769260,nssv1769301,nssv1769261,nssv1769296,nssv1769280,nssv1769303,nssv1769255,nssv1769306,nssv1769331,nssv1769277,nssv1769262,nssv1769342,nssv1769266,nssv1769299,nssv1769256,nssv1769314,nssv1769334,nssv1769322,nssv1769253,nssv1769298,nssv1769273,nssv1769343,nssv1769267,nssv1769327,nssv1769275,nssv1769308,nssv1769270,nssv1769312,nssv1769264,nssv1769311,nssv1769268,nssv1769346,nssv1769328,nssv1769290,nssv1769259,nssv1769300,nssv1769272,nssv1769321,nssv1769316,nssv1769251,nssv1769309,nssv1769313,nssv1769345,nssv1769307,nssv1769295,nssv1769340,nssv1769286,nssv1769347,nssv1769294,nssv1769325,nssv1769315,nssv1769288,nssv1769291,nssv1769320,nssv1769278,nssv1769302,nssv1769339,nssv1769276,nssv1769323,nssv1769338,nssv1769304,nssv1769310,nssv1769305 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv520494 1 60383617 60401034 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694080 M 2026 0 1 "" nsv524844 1 60442564 60450036 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700846 M 2026 0 1 "" nsv524288 1 60450036 60454461 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700188 M 2026 0 1 "" nsv1002154 1 60481823 60520828 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463461 M 29084 0 1 "" esv3305056 1 60487375 60487376 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7766633 M 185 1 0 "" NA12814 esv3342734 1 60487381 60487400 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594435 M 185 1 0 "" NA12814 esv3367900 1 60488276 60488295 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594447 M 185 1 0 "" NA12872 nsv1012657 1 60537844 61554361 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473444 M 29084 1 0 LOC645030,NFIA nsv506930 1 60592516 60598516 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617530 M 4 0 0 "" CHM nsv1008703 1 60632943 60702429 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482166 M 29084 1 0 "" esv2762144 1 60656154 60741526 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005391 M 1109 1 0 "" RW_0061 nsv1001622 1 60736052 60787162 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480955 M 29084 1 0 "" nsv1054 1 60777757 60811193 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9195 M 9 1 0 "" NA12156 nsv476287 1 60781321 60781321 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018938 M 9 1 0 "" NA12878 esv3447080 1 60917158 60917177 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594458 M 185 1 0 "" NA19141 esv3307414 1 60917173 60917174 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7832977,essv7827013,essv7783634,essv7817053,essv7782143,essv7812514,essv7816342,essv7812352,essv7803694 M 185 9 0 "" NA18499,NA18501,NA18523,NA18564,NA18593,NA18961,NA19099,NA19116,NA19141 esv3439984 1 60917179 60917196 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899158,essv8899155,essv8899154,essv8899160,essv8899161,essv8899156,essv8899162,essv8899157 M 185 8 0 "" NA18499,NA18501,NA18523,NA18564,NA18593,NA18961,NA19099,NA19116 esv2113114 1 60970754 60971180 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4727283 M 1 0 1 "" NA18507 dgv99e59 1 61060683 61060950 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302468,esv3302880 M 185 66 0 "" NA07037,NA07051,NA07346,NA07357,NA10847,NA10851,NA11830,NA11831,NA11881,NA11894,NA11918,NA11919,NA11993,NA11995,NA12004,NA12144,NA12154,NA12156,NA12414,NA12489,NA12749,NA12750,NA12776,NA12878,NA12891,NA12892,NA18498,NA18499,NA18501,NA18502,NA18504,NA18507,NA18508,NA18510,NA18511,NA18516,NA18517,NA18522,NA18523,NA18537,NA18550,NA18558,NA18563,NA18593,NA18853,NA18858,NA18861,NA18870,NA18871,NA18907,NA18909,NA18943,NA18948,NA19093,NA19099,NA19102,NA19116,NA19129,NA19138,NA19147,NA19172,NA19190,NA19225,NA19238,NA19239,NA19240 esv3422937 1 61060706 61060922 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670904,essv8670902,essv8670903,essv8670901,essv8670900,essv8670899 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv521131 1 61109117 61109878 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697805 M 2026 0 1 "" esv3445984 1 61116645 61116645 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701370 M 185 1 0 "" NA12878 esv3432884 1 61116648 61116669 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863706 M 185 1 0 "" NA12005 esv25296 1 61320290 61322326 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19873 M 40 0 1 NFIA NA12156 dgv296n54 1 61320319 61322082 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546369,nsv546370 M 17421 3 0 NFIA nsv1008634 1 61386373 61444056 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478200 M 29084 0 1 NFIA nsv1065 1 61420119 61447271 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5607 M 9 1 0 NFIA NA19129 esv3382326 1 61455485 61455496 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863707 M 185 1 0 NFIA NA12005 nsv1010797 1 61476554 61898558 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701241 M 29084 1 0 LOC645030,MGC34796,NFIA nsv1077 1 61570465 61604305 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2961 M 9 1 0 NFIA NA18555 nsv479652 1 61586445 61586445 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017378 M 9 0 0 NFIA nsv480302 1 61590112 61590112 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012892 M 9 0 0 NFIA nsv481479 1 61593691 61593691 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011374 M 9 0 0 NFIA nsv512741 1 61631222 61631624 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625368 M 1 1 0 NFIA 1 esv3352599 1 61631409 61632147 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652094 M 185 1 0 NFIA NA19240 esv3310487 1 61631454 61631471 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843573 M 185 1 0 NFIA NA19240 esv3339821 1 61631455 61631471 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740976 M 185 1 0 NFIA NA19240 esv275289 1 61633690 61634339 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585133,essv2585952 M 1250 1 1 NFIA nsv473789 1 61674300 61674300 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010834 M 9 1 0 NFIA NA12156 nsv1011075 1 61707894 61741431 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465013,nssv3474601,nssv3476530 M 29084 0 3 "" nsv161106 1 61732093 61735957 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179684 M 24 "" nsv475027 1 61770053 61770053 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013536 M 9 1 0 "" NA18956 esv3361164 1 61794208 61794227 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594469 M 185 1 0 "" NA12249 esv2762145 1 61799324 61801052 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005392 M 1109 0 1 "" RW_0170 nsv1088 1 61826154 61859016 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5608 M 9 1 0 "" NA19129 nsv1011087 1 61832248 61855388 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471090 M 29084 1 0 "" nsv820220 1 61853831 61856325 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419438 M 2 1 0 "" AK1 esv2508963 1 61854956 61856467 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5332870 M 1 0 1 "" NA18507 esv6698 1 61855212 61856548 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29139 M 1 0 0 "" esv2291987 1 61855276 61856476 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4876772 M 1 0 1 "" NA18507 nsv822954 1 61855369 61856416 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431076,nssv1424014,nssv1423121,nssv1425502,nssv1428027,nssv1437226,nssv1437941,nssv1430346,nssv1424741,nssv1440815,nssv1432152,nssv1421455 M 31 0 12 "" AK10,AK16,AK18,AK2,AK4,NA18592,NA18949,NA18951,NA18969,NA18972,NA18997,NA18999 nsv820380 1 61855369 61856456 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420347 M 1 0 1 "" NA10851 esv24970 1 61855399 61856327 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10947 M 40 11 11 "" NA07045,NA11894,NA11931,NA11995,NA12044,NA12156,NA12287,NA12414,NA12749,NA12878,NA15510,NA18505,NA18517,NA18523,NA18858,NA18907,NA18909,NA19099,NA19108,NA19147,NA19190,NA19225 nsv160205 1 61855446 61856289 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178783 M 24 "" dgv297n54 1 61855509 61856145 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546374,nsv546372,nsv546371,nsv546376,nsv546373 M 17421 0 291 "" nsv546375 1 61855560 61856548 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715795 M 17421 0 1 "" dgv46n67 1 61855664 61856416 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822976,nsv822965 M 31 6 0 "" NA18526,NA18537,NA18547,NA18570,NA18582,NA18947 nsv1007318 1 61856548 61885690 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475224 M 29084 1 0 "" nsv508226 1 61863681 61913192 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620129 M 4 0 1 MGC34796 NA15510 nsv546377 1 61875609 61889501 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715799 M 17421 0 1 "" nsv546378 1 61883642 61888876 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv715800 M 17421 0 1 "" dgv298n54 1 61883642 61891377 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546381,nsv546380,nsv546379 M 17421 0 3 "" nsv819394 1 61884829 61892114 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419819 M 2 0 1 "" AK1 esv21802 1 61885959 61892332 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14181 M 40 0 7 "" NA06985,NA07037,NA07045,NA12287,NA12749,NA12776,NA15510 nsv435721 1 61886002 61892933 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465984 M 2 0 1 MGC34796 NA15510 nsv822987 1 61886152 61892084 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1433424,nssv1423122,nssv1431814,nssv1440816,nssv1437942 M 31 0 5 "" AK20,NA18526,NA18951,NA18969,NA18999 esv33569 1 61886378 61891818 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101746,essv95902,essv100819,essv99054,essv94333,essv98576,essv101554,essv95067,essv98249,essv93538,essv99713,essv95336,essv94265,essv96959,essv101360,essv94787,essv98900,essv94548,essv99183,essv94975,essv95593,essv97907,essv93198,essv101009,essv92690,essv93876,essv98465,essv96119 M 51 25 3 "" 21603,21606,21634,21656,21693,21721,21772,21791,21805,21808,21817,21837,21841,21872,21909,21911,21932,21938,21944,22007,22085,22128,22170,22217,22231,22275,22352,22394 esv2421667 1 61886594 61890775 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5048142,essv5017594,essv5075873,essv5059742,essv5145849,essv5020640,essv5138839,essv5144044,essv5089447,essv5009624,essv5078263,essv5042132,essv5061602,essv5131921,essv5158107,essv5123637,essv5130584,essv5155137,essv5113747,essv5109607,essv5007925,essv5065809,essv5103729,essv5091620,essv5138800,essv5019096,essv5019227,essv5123815,essv5052083,essv5043568,essv5088049,essv5132609,essv5028375,essv5008935,essv5116171,essv5071948,essv5009828,essv5099818,essv5125797,essv5139230,essv5012109,essv5130037,essv5078022,essv5110136,essv5158709,essv5053947,essv5102908,essv5090988,essv5023714,essv5043061,essv5010956,essv5065586,essv5003433,essv5060236,essv5108999,essv5010828,essv5133475,essv5086898,essv5044362,essv5022935,essv5008922,essv5081134,essv5033563,essv5110273,essv5017071,essv5112357,essv5088616,essv5109369,essv5078832,essv5119691,essv5125433,essv5145369,essv5025655,essv5074760,essv5150837,essv5050562,essv5119782,essv5133004,essv5150746,essv5079001,essv5082899,essv5087987,essv5059389,essv5082239,essv5017406,essv5031711,essv5139433,essv5076461,essv5055015,essv5022770,essv5103650,essv5059248,essv5100466,essv5099899,essv5091099,essv5035842,essv5016298,essv5031068,essv5135631,essv5055577,essv5155354,essv5035186,essv5027097,essv5059931,essv5056003,essv5149275,essv5093059,essv5034973,essv5086013,essv5007489,essv5094063,essv5049209,essv5118646,essv5098488,essv5050600,essv5064209,essv5150401,essv5083291,essv5066781,essv5107236,essv5124011,essv5102342,essv5085969,essv5012759,essv5104116,essv5004922,essv5159102,essv5052826,essv5010006,essv5155033,essv5071789,essv5081030,essv5108005,essv5087068,essv5051423,essv5038016,essv5136234,essv5043603,essv5092199,essv5116977,essv5127413,essv5017349,essv5064709,essv5016036,essv5023824,essv5082791,essv5148497,essv5131470,essv5127853,essv5082131,essv5039537,essv5096340,essv5084784,essv5023093,essv5106569,essv5119789,essv5066567,essv5065600,essv5095881,essv5124133,essv5018079,essv5160396,essv5051859,essv5062869,essv5144212,essv5024247,essv5140526,essv5095195,essv5151519,essv5018311,essv5068019,essv5118607,essv5126892,essv5144058,essv5132182,essv5034626,essv5156186,essv5079668,essv5109138,essv5089704,essv5063782,essv5008384,essv5088599,essv5140510,essv5103847,essv5133176,essv5088655,essv5097802,essv5086465,essv5126290,essv5108810,essv5009163,essv5122332,essv5153182,essv5073550,essv5011213,essv5119198,essv5021820,essv5129524,essv5135571,essv5119177,essv5086374,essv5007237,essv5122117,essv5145155,essv5142976,essv5033954 M 1184 0 207 "" NA06985,NA06991,NA06993,NA06994,NA06995,NA07029,NA07037,NA07045,NA07345,NA07347,NA07348,NA07349,NA07357,NA10835,NA10837,NA10838,NA10855,NA10856,NA10865,NA11829,NA11830,NA11831,NA11891,NA12003,NA12155,NA12249,NA12272,NA12275,NA12286,NA12287,NA12335,NA12341,NA12383,NA12399,NA12718,NA12739,NA12749,NA12750,NA12751,NA12752,NA12760,NA12776,NA12801,NA12802,NA12813,NA12815,NA12832,NA12842,NA12865,NA12875,NA12877,NA12889,NA17965,NA17966,NA17987,NA17988,NA17996,NA18102,NA18112,NA18114,NA18132,NA18143,NA18147,NA18148,NA18149,NA18151,NA18152,NA18153,NA18154,NA18158,NA18162,NA18526,NA18529,NA18536,NA18546,NA18550,NA18558,NA18559,NA18593,NA18595,NA18599,NA18602,NA18603,NA18609,NA18610,NA18613,NA18614,NA18619,NA18627,NA18635,NA18637,NA18639,NA18641,NA18642,NA18643,NA18674,NA18682,NA18740,NA18747,NA18944,NA18948,NA18951,NA18959,NA18960,NA18961,NA18962,NA18965,NA18966,NA18967,NA18969,NA18971,NA18987,NA18999,NA19001,NA19005,NA19009,NA19058,NA19068,NA19078,NA19079,NA19081,NA19087,NA19248,NA19650,NA19652,NA19656,NA19661,NA19663,NA19664,NA19665,NA19670,NA19671,NA19676,NA19681,NA19684,NA19685,NA19686,NA19704,NA19720,NA19721,NA19747,NA19748,NA19749,NA19750,NA19755,NA19757,NA19777,NA19778,NA19779,NA19781,NA19835,NA19982,NA20292,NA20297,NA20302,NA20317,NA20319,NA20348,NA20502,NA20508,NA20528,NA20535,NA20543,NA20582,NA20588,NA20753,NA20771,NA20773,NA20774,NA20786,NA20796,NA20797,NA20799,NA20800,NA20802,NA20815,NA20849,NA20861,NA20871,NA20872,NA20875,NA20884,NA20891,NA20906,NA20907,NA21091,NA21099,NA21102,NA21115,NA21137,NA21143,NA21301,NA21317,NA21344,NA21366,NA21385,NA21399,NA21400,NA21401,NA21489,NA21490,NA21526,NA21527,NA21580,NA21582,NA21631,NA21722 esv2763306 1 61886594 61890775 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027957 M 1109 0 1 "" SW_0018 nsv442877 1 61886594 61890775 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617826,nssv1617841,nssv1617822,nssv1617851,nssv1617866,nssv1617846,nssv1617817,nssv1617861,nssv1617854,nssv1617864,nssv1617830,nssv1617821,nssv1617856,nssv1617859,nssv1617848,nssv1617834,nssv1617815,nssv1617831,nssv1617832,nssv1617840,nssv1617852,nssv1617867,nssv1617825,nssv1617855,nssv1617845,nssv1617863,nssv1617871,nssv1617870,nssv1617820,nssv1617829,nssv1617850,nssv1617828,nssv1617849,nssv1617853,nssv1617823,nssv1617827,nssv1617844,nssv1617860,nssv1617833,nssv1617814,nssv1617862,nssv1617842,nssv1617818,nssv1617816,nssv1617838,nssv1617865,nssv1617857,nssv1617839,nssv1617819,nssv1617868,nssv1617843,nssv1617837 M 270 0 52 "" NA06985,NA06991,NA06993,NA06994,NA07029,NA07345,NA07348,NA07357,NA10835,NA10838,NA10855,NA10856,NA11829,NA11830,NA11831,NA12003,NA12155,NA12236,NA12249,NA12750,NA12751,NA12752,NA12760,NA12801,NA12802,NA12813,NA12815,NA12865,NA12875,NA18526,NA18529,NA18550,NA18558,NA18593,NA18603,NA18609,NA18635,NA18637,NA18944,NA18948,NA18951,NA18959,NA18960,NA18965,NA18966,NA18967,NA18969,NA18971,NA18987,NA18992,NA18999,NA19005 dgv299n54 1 61886769 61888876 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546382,nsv546394,nsv546383 M 17421 0 34 "" dgv300n54 1 61886769 61889501 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546395,nsv546385,nsv546384,nsv546396 M 17421 0 11 "" dgv301n54 1 61886769 61891377 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546388,nsv546389,nsv546386,nsv546403,nsv546399,nsv546401,nsv546398,nsv546387,nsv546390,nsv546391,nsv546397,nsv546400,nsv546406,nsv546405 M 17421 0 222 "" dgv302n54 1 61886769 61893169 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546393,nsv546392,nsv546402 M 17421 0 4 MGC34796 nsv513987 1 61887204 61890756 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2867964,nssv2862187,nssv2865405,nssv2863309,nssv2861968,nssv2867104,nssv2858613,nssv2864921,nssv2858837,nssv2861087,nssv2868110,nssv2865467,nssv2867032,nssv2865509,nssv2858971,nssv2861415,nssv2866434,nssv2860821,nssv2862597,nssv2864818,nssv2867093,nssv2866266,nssv2865406,nssv2860505,nssv2866664,nssv2866729,nssv2866814,nssv2868297,nssv2863976,nssv2864897,nssv2863208,nssv2865776,nssv2860277,nssv2868069,nssv2861317,nssv2867665,nssv2867488,nssv2862908,nssv2865704,nssv2867480,nssv2860367,nssv2859133,nssv2863686,nssv2861761,nssv2863071,nssv2862484,nssv2863720,nssv2859411,nssv2865362,nssv2862336,nssv2859205,nssv2860403,nssv2864429,nssv2863043,nssv2860773,nssv2864661,nssv2860905,nssv2859118,nssv2864165,nssv2862100,nssv2863030,nssv2863888,nssv2863250,nssv2868056,nssv2864569,nssv2867374,nssv2861365,nssv2864028,nssv2867197,nssv2867536,nssv2859863,nssv2867617,nssv2866273,nssv2866449,nssv2860459,nssv2859087,nssv2863962,nssv2858846,nssv2862274 M 2366 0 79 "" NA06985,NA06991,NA06993,NA06994,NA06995,NA07037,NA07347,NA07348,NA07349,NA07357,NA10835,NA10837,NA10838,NA10855,NA10856,NA11829,NA11830,NA11831,NA12155,NA12236,NA12249,NA12272,NA12275,NA12286,NA12287,NA12335,NA12341,NA12383,NA12399,NA12718,NA12749,NA12750,NA12751,NA12752,NA12760,NA12776,NA12801,NA12802,NA12813,NA12815,NA12832,NA12842,NA12875,NA12877,NA12889,NA18550,NA18558,NA18593,NA18603,NA18609,NA18635,NA18637,NA18948,NA18959,NA18960,NA18961,NA18965,NA18966,NA18967,NA18969,NA18971,NA18987,NA18992,NA18999,NA19005,NA19248,NA21301,NA21317,NA21344,NA21366,NA21386,NA21399,NA21400,NA21401,NA21488,NA21489,NA21490,NA21526,NA21580 dgv303n54 1 61887235 61891377 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546411,nsv546407,nsv546408,nsv546412,nsv546413,nsv546409,nsv546404,nsv546410 M 17421 0 13 "" nsv546414 1 61888365 61891377 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716088 M 17421 0 1 "" nsv473122 1 61934927 61934927 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013193 M 9 1 0 TM2D1 NA19129 nsv476778 1 62004037 62004037 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013666 M 9 1 0 INADL NA12878 nsv830004 1 62015532 62154816 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446873 M 95 1 0 INADL nsv1099 1 62047905 62088531 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9211 M 9 0 1 INADL NA12156 dgv6n21 1 62052182 62290535 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv518627,nsv522020 M 2026 0 2 INADL nsv472184 1 62060821 62060821 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019103 M 9 1 0 INADL NA18555 esv1631480 1 62109673 62109673 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4051518 M 2 1 0 INADL HuRef esv2549769 1 62162356 62164182 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5305658 M 1 0 1 INADL NA18507 esv6133 1 62162932 62163782 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28574 M 1 0 0 INADL esv2323512 1 62162970 62163733 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4506834 M 1 0 1 INADL NA18507 esv5270 1 62163138 62163616 CNV loss Wang_et_al_2008 18987735 Sequencing essv27711 M 1 0 1 INADL YH nsv159038 1 62163175 62163523 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177616 M 24 INADL esv2472996 1 62163181 62163529 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5202544 M 1 0 1 INADL NA18507 esv1003515 1 62163188 62163536 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579227 M 3 0 1 INADL HuRef esv1040191 1 62163190 62163539 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4185967 M 2 0 1 INADL HuRef nsv1110 1 62168311 62227023 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9296 M 9 0 1 INADL NA18517 nsv546415 1 62178461 62210460 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716089 M 17421 0 1 INADL nsv1001667 1 62180374 62422426 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468307,nssv3468068 M 29084 0 2 INADL nsv1011842 1 62187499 62201118 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471864 M 29084 1 0 INADL esv29630 1 62190379 62190889 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18798 M 40 0 1 INADL NA18858 nsv437210 1 62192315 62220833 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467091 M 60 0 1 INADL NA19205 nsv1010655 1 62200414 62219890 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470374 M 29084 0 1 INADL nsv10217 1 62206492 62225792 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv12447,nssv16110,nssv16424 M 31 0 3 INADL NA18517,NA19132,NA19221 dgv169n100 1 62208355 62219890 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014528,nsv1009859,nsv997843,nsv1004315 M 29084 0 6 INADL nsv947429 1 62209138 62224195 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765874 M 97 0 1 INADL HGDP01284 dgv170n100 1 62209208 62230300 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003774,nsv1009926,nsv1011197 M 29084 0 3 INADL nsv517696 1 62209517 62214376 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689496,nssv661867,nssv673772,nssv675663,nssv660368,nssv681293,nssv664968,nssv664719,nssv685685,nssv694621,nssv665354,nssv676169,nssv665406,nssv671365,nssv666544,nssv682090,nssv654241,nssv662958,nssv654435 M 2026 0 19 INADL nsv437211 1 62209517 62220833 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467092 M 60 0 1 INADL NA19221 esv26149 1 62210387 62224964 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10531 M 40 0 2 INADL NA18517,NA19108 nsv818189 1 62210460 62214376 CNV loss Wang_et_al_2007 17921354 SNP array nssv1418426 M 112 0 1 INADL NA19192 esv2421746 1 62210460 62223123 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5071831,essv5077911,essv5041711,essv5035069,essv5130823,essv5159581,essv5069978,essv5111807,essv5119967,essv5109065,essv5152829,essv5123089,essv5044846,essv5093878,essv5050581 M 1184 0 15 INADL NA18517,NA18861,NA19108,NA19118,NA19130,NA19132,NA19192,NA19203,NA19221,NA19222,NA19256,NA19258,NA19834,NA21403,NA21404 nsv546416 1 62210460 62264803 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716090 M 17421 1 0 INADL dgv171n100 1 62211807 62245179 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005178,nsv999481 M 29084 0 2 INADL esv2764255 1 62211819 62223123 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005394,essv7005393 M 1109 0 2 INADL RW_0061,RW_0546 nsv438388 1 62214376 62215834 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv471002,nssv470851,nssv470991,nssv470740,nssv470962,nssv470980 M 269 0 6 INADL NA19098,NA19100,NA19203,NA19205,NA19221,NA19222 nsv546417 1 62315305 62430118 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716091 M 17421 0 1 INADL esv3404887 1 62346575 62346616 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899167,essv8899168,essv8899163,essv8899164,essv8899166,essv8899171,essv8899169,essv8899165 M 185 8 0 INADL NA18537,NA18564,NA18576,NA18592,NA18609,NA18638,NA18960,NA18964 esv3304147 1 62346588 62346589 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7742662,essv7757901,essv7756631,essv7748587,essv7752274,essv7756733,essv7762588,essv7756983 M 185 8 0 INADL NA18537,NA18564,NA18576,NA18592,NA18609,NA18638,NA18960,NA18964 nsv1012683 1 62360440 62416586 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474575 M 29084 1 0 INADL esv2514338 1 62375345 62376262 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5269117 M 1 1 0 INADL NA18507 esv1091714 1 62375907 62375907 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3593286 M 2 1 0 INADL HuRef nsv822998 1 62386289 62388868 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422375 M 31 0 1 INADL NA18552 nsv511694 1 62395128 62397132 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626334 M 1 0 1 INADL 1 esv997498 1 62395416 62396751 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587084 M 3 1 0 INADL HuRef esv3893601 1 62400263 62581353 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796757 M 3017 0 1 INADL,KANK4,L1TD1 nsv546418 1 62418770 62429397 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716092 M 17421 0 1 "" nsv546419 1 62423138 62429397 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716093 M 17421 0 1 "" nsv819557 1 62425508 62430564 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419677 M 2 1 0 "" AK1 dgv47n67 1 62427253 62429802 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823020,nsv823009 M 31 0 16 "" AK16,AK20,AK4,AK8,NA18526,NA18542,NA18566,NA18582,NA18942,NA18947,NA18949,NA18951,NA18968,NA18973,NA18997,NA18999 nsv821202 1 62427253 62429802 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420358 M 1 0 1 "" NA10851 esv24847 1 62427437 62429802 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15807 M 40 31 0 "" NA06985,NA11894,NA11931,NA11993,NA11995,NA12004,NA12044,NA12156,NA12287,NA12414,NA12749,NA12828,NA12878,NA15510,NA18502,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv546420 1 62427465 62429040 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716094 M 17421 0 1 "" dgv304n54 1 62427465 62429774 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546425,nsv546430,nsv546422,nsv546428,nsv546421,nsv546429,nsv546424,nsv546427,nsv546426,nsv546423 M 17421 0 40 "" nsv546431 1 62428063 62429774 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716135,nssv716136 M 17421 0 2 "" esv3893612 1 62430118 62459692 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779077 M 3017 0 1 L1TD1 esv2457868 1 62516577 62516636 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5342534 M 1 0 1 KANK4 NA18507 nsv520333 1 62539115 62542475 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv662976,nssv672010,nssv676248 M 2026 0 3 KANK4 nsv525191 1 62546291 62577307 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701270 M 2026 0 1 KANK4 nsv1014376 1 62749060 62953947 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477555 M 29084 0 1 ANGPTL3,DOCK7 nsv1011203 1 62819634 62854467 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472050 M 29084 0 1 ANGPTL3,DOCK7 esv2762146 1 62819646 62822576 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005395 M 1109 0 1 DOCK7 RW_0529 nsv1000988 1 62834379 62880114 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464932 M 29084 0 1 ANGPTL3,DOCK7 esv2553332 1 62923799 62925525 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5273753 M 1 0 1 DOCK7 NA18507 esv5823 1 62924163 62924989 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28264 M 1 0 0 DOCK7 esv2408644 1 62924218 62924957 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4603803 M 1 0 1 DOCK7 NA18507 esv5210 1 62924365 62924892 CNV loss Wang_et_al_2008 18987735 Sequencing essv27651 M 1 0 1 DOCK7 YH esv1006212 1 62924415 62924753 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581424 M 3 0 1 DOCK7 HuRef esv1250656 1 62924416 62924755 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3942870 M 2 0 1 DOCK7 HuRef nsv159028 1 62924424 62924762 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177606 M 24 DOCK7 nsv830015 1 63033731 63227884 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446884,nssv1446895 M 95 2 0 ATG4C esv3411593 1 63142731 63142731 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740977 M 185 1 0 "" NA19240 nsv1121 1 63146806 63181325 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4256 M 9 1 0 "" NA12878 nsv522407 1 63165253 63168704 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695188 M 2026 1 0 "" nsv823032 1 63205441 63205978 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437944,nssv1436343 M 31 0 2 "" NA18542,NA18951 nsv461661 1 63214349 63381975 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538022 M 1557 0 1 "" HGDP00901 nsv546432 1 63214349 63381975 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173002 M 17421 0 1 "" HGDP00901 nsv160360 1 63234539 63234539 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178938 M 24 "" esv2762147 1 63245456 63254613 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005396 M 1109 0 1 "" RW_0183 nsv159348 1 63254630 63258935 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177926 M 24 "" dgv48n67 1 63259532 63260287 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv823054,nsv823043 M 31 2 0 "" AK10,NA18999 nsv160331 1 63284269 63284269 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178909 M 24 "" esv24886 1 63387241 63388521 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13715 M 40 0 3 "" NA19108,NA19190,NA19225 nsv823065 1 63410691 63411202 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426394 M 31 1 0 LINC00466 AK6 esv1006508 1 63476823 63481657 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565518 M 3 0 1 LINC00466 HuRef esv5933 1 63477718 63480984 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28374 M 1 0 0 LINC00466 nsv511695 1 63477876 63480751 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626335 M 1 0 1 LINC00466 1 esv1000281 1 63477948 63480737 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3576405 M 3 0 1 LINC00466 HuRef esv1348268 1 63477954 63480744 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3858650 M 2 0 1 LINC00466 HuRef nsv945975 1 63500251 63500842 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769387,nssv1769424,nssv1769374,nssv1769431,nssv1769378,nssv1769437,nssv1769372,nssv1769416,nssv1769373,nssv1769434,nssv1769389,nssv1769433,nssv1769383,nssv1769409,nssv1769371,nssv1769459,nssv1769447,nssv1769392,nssv1769367,nssv1769405,nssv1769385,nssv1769432,nssv1769444,nssv1769390,nssv1769377,nssv1769406,nssv1769443,nssv1769397,nssv1769442,nssv1769402,nssv1769396,nssv1769453,nssv1769366,nssv1769428,nssv1769368,nssv1769415,nssv1769369,nssv1769401,nssv1769451,nssv1769440,nssv1769382,nssv1769419,nssv1769375,nssv1769399,nssv1769380,nssv1769365,nssv1769448,nssv1769438,nssv1769370,nssv1769413,nssv1769450,nssv1769418,nssv1769446,nssv1769403,nssv1769449,nssv1769398,nssv1769379,nssv1769410,nssv1769381,nssv1769407,nssv1769393,nssv1769388,nssv1769384,nssv1769412,nssv1769376,nssv1769441,nssv1769386,nssv1769420,nssv1769394,nssv1769411,nssv1769445,nssv1769425,nssv1769452,nssv1769421,nssv1769422,nssv1769404,nssv1769426,nssv1769417,nssv1769455,nssv1769454,nssv1769458,nssv1769436,nssv1769395,nssv1769423,nssv1769457,nssv1769460,nssv1769391,nssv1769435,nssv1769414,nssv1769400,nssv1769430,nssv1769429,nssv1769427,nssv1769456,nssv1769439,nssv1769408,nssv1769461 M 97 10 0 LINC00466 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv21673 1 63507021 63508212 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17225 M 40 0 1 LINC00466 NA18858 nsv461672 1 63526324 63775444 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538033 M 1557 1 0 ALG6,EFCAB7,FOXD3,ITGB3BP,LINC00466,MIR6068 HGDP00935 nsv546433 1 63526324 63775444 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173003 M 17421 1 0 ALG6,EFCAB7,FOXD3,ITGB3BP,LINC00466,MIR6068 HGDP00935 nsv470714 1 63540185 63775444 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547732 M 443 1 0 ALG6,EFCAB7,FOXD3,ITGB3BP,LINC00466,MIR6068 HGDP00935 nsv1002554 1 63592864 63697407 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701242 M 29084 1 0 ALG6,ITGB3BP nsv1132 1 63606963 63625359 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6639 M 9 0 1 ALG6 NA12156 esv1543308 1 63638528 63638584 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4257015 M 2 0 1 ALG6 HuRef nsv546434 1 63687931 63814375 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716137 M 17421 0 1 DLEU2L,EFCAB7,ITGB3BP nsv477252 1 63688630 63688630 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018531 M 9 1 0 ITGB3BP NA18517 nsv830026 1 63715250 63733275 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1446928,nssv1446906,nssv1446917,nssv1446939 M 95 1 3 ITGB3BP nsv510935 1 63757798 63778079 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621650 M 4 0 0 EFCAB7,ITGB3BP NA15510 nsv1001451 1 63770427 63815732 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466883 M 29084 0 1 DLEU2L,EFCAB7 nsv823076 1 63777628 63778123 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1425504 M 31 1 0 EFCAB7 AK4 nsv1143 1 63809289 63839813 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5623 M 9 1 0 EFCAB7,PGM1 NA19129 esv2499233 1 63908510 63911345 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5369634 M 1 0 1 "" NA18507 nsv461683 1 63938133 63965785 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538043 M 1557 0 1 "" NINDS_172 nsv546435 1 63938133 63965785 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173004 M 17421 0 1 "" NINDS_172 esv3429832 1 63959786 63959805 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678415 M 185 1 0 "" NA19240 esv8740 1 64026071 64026274 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31181 M 1 0 0 ROR1 nsv945976 1 64027103 64028181 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769467,nssv1770454,nssv1770415,nssv1770481,nssv1769469,nssv1770435,nssv1769475,nssv1770460,nssv1769477,nssv1770446,nssv1769480,nssv1770432,nssv1769468,nssv1770480,nssv1770471,nssv1770457,nssv1770463,nssv1770426,nssv1769464,nssv1770479,nssv1769470,nssv1770462,nssv1770468,nssv1770422,nssv1769463,nssv1770430,nssv1769466,nssv1770428,nssv1770417,nssv1770448,nssv1770465,nssv1770482,nssv1769474,nssv1770416,nssv1770470,nssv1770427,nssv1770464,nssv1770434,nssv1769486,nssv1770437,nssv1769484,nssv1770447,nssv1769479,nssv1770473,nssv1769465,nssv1770421,nssv1769472,nssv1770420,nssv1770472,nssv1770412,nssv1769471,nssv1770451,nssv1770466,nssv1770452,nssv1770467,nssv1770423,nssv1769473,nssv1770459,nssv1769478,nssv1770431,nssv1770469,nssv1770453,nssv1769481,nssv1770477,nssv1770414,nssv1770474,nssv1769482,nssv1769487,nssv1769476,nssv1770439,nssv1769483,nssv1770456,nssv1770449,nssv1769462,nssv1770476,nssv1770424,nssv1770425,nssv1770441,nssv1770419,nssv1770438,nssv1770455,nssv1769485,nssv1770458,nssv1770443,nssv1770445,nssv1770450,nssv1770436,nssv1770413,nssv1770433,nssv1770440,nssv1770478,nssv1770442,nssv1770461,nssv1770418,nssv1770475,nssv1770444,nssv1770429 M 97 10 0 ROR1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945977 1 64079745 64082921 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770493,nssv1770515,nssv1768811,nssv1768783,nssv1770489,nssv1768804,nssv1770514,nssv1768802,nssv1768809,nssv1768791,nssv1770495,nssv1768780,nssv1770497,nssv1768794,nssv1770490,nssv1768820,nssv1770500,nssv1768819,nssv1768810,nssv1770483,nssv1770507,nssv1768826,nssv1770501,nssv1768787,nssv1770503,nssv1768799,nssv1768812,nssv1770508,nssv1768816,nssv1768801,nssv1770512,nssv1768797,nssv1768813,nssv1768823,nssv1770487,nssv1770519,nssv1770504,nssv1768774,nssv1770496,nssv1768827,nssv1768814,nssv1770513,nssv1768808,nssv1770509,nssv1770491,nssv1768805,nssv1770498,nssv1770525,nssv1770494,nssv1770523,nssv1770484,nssv1768807,nssv1770488,nssv1768792,nssv1768817,nssv1768790,nssv1768815,nssv1768798,nssv1770499,nssv1768818,nssv1770502,nssv1768821,nssv1770485,nssv1768784,nssv1770505,nssv1768776,nssv1770486,nssv1768800,nssv1770511,nssv1768777,nssv1770492,nssv1768793,nssv1768806,nssv1768788,nssv1770524,nssv1770517,nssv1768785,nssv1768779,nssv1768781,nssv1770518,nssv1768778,nssv1770520,nssv1768786,nssv1768796,nssv1768825,nssv1768775,nssv1768789,nssv1768803,nssv1768782,nssv1770522,nssv1768795,nssv1768824,nssv1768822,nssv1770516,nssv1770510,nssv1770506,nssv1770521 M 97 10 0 ROR1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv830037 1 64117961 64333956 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446950 M 95 1 0 ROR1 nsv1154 1 64166915 64201313 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9224 M 9 0 1 ROR1 NA12156 esv3431289 1 64196004 64196018 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863711 M 185 1 0 ROR1 NA12005 nsv823087 1 64219141 64220142 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431077 M 31 0 1 ROR1 AK18 esv3411421 1 64264360 64264384 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674056 M 185 1 0 ROR1 NA19238 esv3309693 1 64264370 64264371 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837709,essv7838585 M 185 2 0 ROR1 NA19238,NA19240 esv3376683 1 64284337 64284385 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899172 M 185 1 0 ROR1 NA19129 esv3305358 1 64284342 64284343 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758865 M 185 1 0 ROR1 NA19129 esv993189 1 64404029 64417025 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564882 M 3 0 1 ROR1 HuRef esv23216 1 64435102 64437483 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20526 M 40 0 1 "" NA19108 nsv546436 1 64443660 64507576 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716138 M 17421 1 0 UBE2U esv2758938 1 64449736 64548984 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757733 M 270 0 1 UBE2U NA19003 nsv546437 1 64468665 64776366 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716139 M 17421 0 1 CACHD1,UBE2U esv1385597 1 64477405 64477463 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4007424 M 2 0 1 UBE2U HuRef nsv477076 1 64477991 64477991 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017964 M 9 1 0 UBE2U NA18517 nsv1006396 1 64496291 64542073 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701243 M 29084 1 0 "" nsv1000188 1 64501371 64785146 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464112 M 29084 1 0 CACHD1 nsv1009053 1 64517566 64542073 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482505 M 29084 1 0 "" esv2764207 1 64517578 64518204 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005398,essv7005399,essv7005397,essv7005401 M 1109 4 0 "" RW_0211,RW_0218,RW_0515,RW_0602 nsv1000490 1 64562965 64577497 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480530 M 29084 1 0 "" esv3412086 1 64587052 64588050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692398 M 185 1 0 "" NA19240 nsv830048 1 64605794 64783509 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446962 M 95 1 0 CACHD1 esv23183 1 64612208 64624695 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11146 M 40 0 3 "" NA18907,NA19099,NA19114 nsv947430 1 64613268 64626743 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2760040 M 97 0 1 "" HGDP00927 nsv442886 1 64615315 64624133 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617875,nssv1617890,nssv1617877,nssv1617882,nssv1617883,nssv1617886,nssv1617894,nssv1617872,nssv1617892,nssv1617881,nssv1617893,nssv1617874,nssv1617884,nssv1617873,nssv1617876,nssv1617887,nssv1617896,nssv1617895,nssv1617889,nssv1617885,nssv1617888,nssv1617878,nssv1617879 M 270 0 23 "" NA18500,NA18501,NA18503,NA18504,NA18856,NA18857,NA18859,NA18912,NA19093,NA19094,NA19099,NA19137,NA19140,NA19143,NA19144,NA19145,NA19152,NA19154,NA19159,NA19161,NA19209,NA19210,NA19211 nsv513988 1 64616688 64621340 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2867133,nssv2867286,nssv2865027,nssv2863314,nssv2862196,nssv2863331,nssv2866735,nssv2861585,nssv2867164,nssv2858750,nssv2868192,nssv2867592,nssv2866314,nssv2865952,nssv2859945,nssv2866899,nssv2865699,nssv2868465,nssv2864155,nssv2862964,nssv2864907,nssv2859160,nssv2859944,nssv2858992,nssv2865572,nssv2860774,nssv2860312,nssv2858506,nssv2866151,nssv2867685,nssv2861290,nssv2866698,nssv2868277,nssv2861030,nssv2863124,nssv2868087,nssv2862069,nssv2866113,nssv2862228,nssv2859012,nssv2858812,nssv2860465,nssv2862710,nssv2866236,nssv2860906,nssv2862064,nssv2863970,nssv2862790,nssv2859662 M 2366 0 49 "" NA18489,NA18500,NA18501,NA18503,NA18504,NA18856,NA18857,NA18859,NA18868,NA18907,NA18923,NA18925,NA18934,NA18935,NA19093,NA19094,NA19099,NA19102,NA19114,NA19118,NA19121,NA19122,NA19123,NA19137,NA19140,NA19143,NA19144,NA19145,NA19149,NA19151,NA19152,NA19154,NA19159,NA19161,NA19174,NA19179,NA19180,NA19198,NA19199,NA19201,NA19202,NA19209,NA19210,NA19211,NA19248,NA19249,NA19252,NA21454,NA21479 esv997649 1 64621804 64623097 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564814 M 3 1 0 "" HuRef esv1055074 1 64653742 64653918 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3740900 M 2 0 1 "" HuRef esv3303888 1 64730649 64730650 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7767000,essv7763667,essv7765443,essv7767572,essv7764819,essv7768653,essv7764019,essv7765198,essv7769210,essv7768288,essv7766063,essv7764262,essv7766294,essv7768139,essv7764892,essv7767104 M 185 16 0 CACHD1 NA11881,NA12043,NA12045,NA12234,NA12249,NA12812,NA12872,NA12873,NA12874,NA12878,NA12891,NA12892,NA18970,NA19143,NA19238,NA19240 esv3309582 1 64730652 64730653 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839988,essv7842649,essv7841409,essv7842245,essv7840797 M 185 5 0 CACHD1 NA12878,NA12891,NA12892,NA19238,NA19240 esv3410076 1 64730660 64730668 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674061,essv8674057,essv8674058,essv8674059,essv8674060 M 185 5 0 CACHD1 NA12878,NA12891,NA12892,NA19238,NA19240 esv1280177 1 64730666 64730666 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4249041 M 2 1 0 CACHD1 HuRef esv1980143 1 64740698 64741165 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4886636 M 1 0 1 CACHD1 NA18507 nsv522029 1 64776057 64776366 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694120 M 2026 0 1 CACHD1 nsv471992 1 64854369 64854369 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020231 M 9 1 0 CACHD1 NA18555 nsv508237 1 64895292 64917221 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620130 M 4 0 1 CACHD1 NA15510 nsv508249 1 64933551 64936666 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622764 M 4 0 1 "" NA18994 nsv159344 1 64960097 64965173 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177922 M 24 "" nsv472766 1 64969040 64969040 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013157 M 9 1 0 "" NA18555 esv2631331 1 64972586 64973977 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5371991 M 1 0 1 "" NA18507 esv1956526 1 64972806 64973231 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4672956 M 1 0 1 "" NA18507 nsv158935 1 64972920 64973016 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177513 M 24 "" esv1157098 1 64973022 64973119 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3737271 M 2 0 1 "" HuRef nsv1005169 1 65077003 65088817 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472560 M 29084 1 0 JAK1 dgv172n100 1 65077058 65108033 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011697,nsv1006149,nsv1001048 M 29084 4 0 JAK1 nsv1006347 1 65077782 65088817 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477707,nssv3470909 M 29084 1 1 JAK1 nsv525227 1 65081975 65140630 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701316 M 2026 0 1 JAK1 nsv823098 1 65091997 65092746 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1424743 M 31 0 1 JAK1 AK2 nsv945979 1 65156185 65157047 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769801,nssv1769839,nssv1769846,nssv1768859,nssv1769813,nssv1768834,nssv1769825,nssv1769832,nssv1768831,nssv1769835,nssv1768864,nssv1768832,nssv1769797,nssv1768862,nssv1768863,nssv1768860,nssv1768854,nssv1768849,nssv1769802,nssv1768845,nssv1768869,nssv1768835,nssv1769805,nssv1769834,nssv1768865,nssv1769833,nssv1769815,nssv1768833,nssv1769849,nssv1769837,nssv1768858,nssv1769836,nssv1769809,nssv1768846,nssv1768867,nssv1768848,nssv1768870,nssv1768842,nssv1769812,nssv1768843,nssv1768861,nssv1768836,nssv1769816,nssv1768840,nssv1769819,nssv1769838,nssv1769804,nssv1768847,nssv1769807,nssv1768850,nssv1769827,nssv1768839,nssv1769831,nssv1768838,nssv1769796,nssv1768844,nssv1769800,nssv1768853,nssv1768857,nssv1769840,nssv1769811,nssv1768855,nssv1769830,nssv1768837,nssv1769822,nssv1768841,nssv1769845,nssv1769841,nssv1769823,nssv1768851,nssv1769798,nssv1768852,nssv1769799,nssv1769842,nssv1769843,nssv1769828,nssv1769847,nssv1768871,nssv1769850,nssv1769821,nssv1769844,nssv1768868,nssv1769806,nssv1769803,nssv1769826,nssv1769817,nssv1768866,nssv1769829,nssv1769814,nssv1769820,nssv1769848,nssv1769851,nssv1769818,nssv1769810,nssv1769824,nssv1769808,nssv1768856 M 97 10 0 JAK1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv830059 1 65156318 65312749 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446973 M 95 0 1 JAK1,MIR101-1,MIR3671 esv2763311 1 65178989 65186205 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7027969 M 1109 1 0 JAK1 SW_1134 esv275588 1 65200182 65207639 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586106 M 1250 0 1 JAK1 esv2421783 1 65201803 65202385 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5140237,essv5160284,essv5075599,essv5138245,essv5066518,essv5043503,essv5143405,essv5146149,essv5143701,essv5037018,essv5106478,essv5092611,essv5009899,essv5013325,essv5152180,essv5054997,essv5149570,essv5152928,essv5041361,essv5029641,essv5016734,essv5069662,essv5016022,essv5079483,essv5136823,essv5073697,essv5156385,essv5125418,essv5087078,essv5063319,essv5152768,essv5144485,essv5155544,essv5145137,essv5008836,essv5009941,essv5103290,essv5004282,essv5035629,essv5033536,essv5032463,essv5116557,essv5018792,essv5065574,essv5160218,essv5086562,essv5131537,essv5156482,essv5055615,essv5142947,essv5138124,essv5028980,essv5029527,essv5085543,essv5030424,essv5058399,essv5052164,essv5160003,essv5086612,essv5160020,essv5102813,essv5139096,essv5088555,essv5093865,essv5020999,essv5090879,essv5087965,essv5129412,essv5057689,essv5030749,essv5036262,essv5153391,essv5137564,essv5156947,essv5131604,essv5109181,essv5090252,essv5135532,essv5101361,essv5149712,essv5083707,essv5063334,essv5058604,essv5066651,essv5151965,essv5006625,essv5019376,essv5010002,essv5038937,essv5058472,essv5095205,essv5137087,essv5072144,essv5049641,essv5094736 M 1184 0 95 JAK1 NA11829,NA17965,NA17966,NA17974,NA17986,NA17987,NA17990,NA17993,NA17996,NA18102,NA18106,NA18109,NA18112,NA18117,NA18118,NA18124,NA18132,NA18134,NA18135,NA18138,NA18139,NA18144,NA18146,NA18147,NA18149,NA18151,NA18156,NA18166,NA18529,NA18548,NA18550,NA18557,NA18558,NA18559,NA18561,NA18564,NA18566,NA18572,NA18577,NA18579,NA18594,NA18609,NA18610,NA18614,NA18615,NA18627,NA18628,NA18631,NA18642,NA18643,NA18645,NA18682,NA18702,NA18745,NA18942,NA18943,NA18945,NA18947,NA18948,NA18959,NA18960,NA18965,NA18966,NA18970,NA18990,NA18991,NA18995,NA18999,NA19001,NA19002,NA19007,NA19010,NA19066,NA19067,NA19068,NA19085,NA19652,NA19657,NA19708,NA20771,NA20805,NA20845,NA20849,NA20853,NA20858,NA20859,NA20879,NA20885,NA20894,NA20909,NA21105,NA21143,NA21436,NA21524,NA21525 nsv945980 1 65222531 65223978 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769873,nssv1769920,nssv1769874,nssv1769917,nssv1769866,nssv1769896,nssv1769853,nssv1769926,nssv1769860,nssv1769910,nssv1769865,nssv1769888,nssv1769859,nssv1769948,nssv1769929,nssv1769940,nssv1769862,nssv1769905,nssv1769870,nssv1769943,nssv1769880,nssv1769939,nssv1769855,nssv1769909,nssv1769934,nssv1769912,nssv1769937,nssv1769915,nssv1769936,nssv1769879,nssv1769863,nssv1769902,nssv1769931,nssv1769899,nssv1769930,nssv1769913,nssv1769856,nssv1769884,nssv1769872,nssv1769946,nssv1769861,nssv1769921,nssv1769869,nssv1769898,nssv1769858,nssv1769895,nssv1769857,nssv1769906,nssv1769935,nssv1769892,nssv1769933,nssv1769916,nssv1769868,nssv1769942,nssv1769864,nssv1769924,nssv1769871,nssv1769887,nssv1769854,nssv1769889,nssv1769876,nssv1769903,nssv1769867,nssv1769945,nssv1769932,nssv1769893,nssv1769881,nssv1769941,nssv1769938,nssv1769897,nssv1769883,nssv1769928,nssv1769908,nssv1769901,nssv1769904,nssv1769927,nssv1769919,nssv1769894,nssv1769877,nssv1769918,nssv1769947,nssv1769890,nssv1769886,nssv1769875,nssv1769885,nssv1769944,nssv1769852,nssv1769925,nssv1769911,nssv1769878,nssv1769907,nssv1769900,nssv1769882,nssv1769923,nssv1769922,nssv1769891,nssv1769914 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1165 1 65235489 65279954 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4638 M 9 0 1 "" NA19129 nsv472980 1 65302135 65302135 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014657 M 9 1 0 "" NA19129 dgv173n100 1 65340922 65453762 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004513,nsv1009166 M 29084 2 0 AK4 nsv945982 1 65391202 65392982 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1769967,nssv1770038,nssv1769962,nssv1770040,nssv1769957,nssv1770004,nssv1769963,nssv1770019,nssv1769956,nssv1770020,nssv1769951,nssv1769982,nssv1769961,nssv1770003,nssv1769973,nssv1769997,nssv1769958,nssv1769983,nssv1769977,nssv1770023,nssv1769970,nssv1769991,nssv1770028,nssv1770011,nssv1769980,nssv1769979,nssv1769960,nssv1770007,nssv1769952,nssv1769988,nssv1770029,nssv1770042,nssv1770027,nssv1770037,nssv1769953,nssv1770000,nssv1769978,nssv1769993,nssv1769950,nssv1769975,nssv1769971,nssv1770014,nssv1769966,nssv1770036,nssv1769969,nssv1769992,nssv1769955,nssv1770045,nssv1769964,nssv1770012,nssv1769954,nssv1770009,nssv1769959,nssv1770017,nssv1770031,nssv1769996,nssv1770032,nssv1770010,nssv1770033,nssv1770043,nssv1769968,nssv1770021,nssv1769965,nssv1769999,nssv1770035,nssv1770002,nssv1770026,nssv1770018,nssv1770034,nssv1769995,nssv1770030,nssv1770025,nssv1770005,nssv1769989,nssv1770015,nssv1770016,nssv1770039,nssv1770006,nssv1769976,nssv1769986,nssv1769994,nssv1769984,nssv1769981,nssv1769985,nssv1769949,nssv1769974,nssv1770024,nssv1770041,nssv1769998,nssv1770001,nssv1770008,nssv1770044,nssv1769987,nssv1769990,nssv1770013,nssv1769972,nssv1770022 M 97 10 0 AK4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522027 1 65398340 65406085 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694797 M 2026 0 1 AK4 esv2446769 1 65454206 65455820 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5287123 M 1 0 1 AK4 NA18507 esv2230166 1 65454637 65455374 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4671957 M 1 0 1 AK4 NA18507 nsv945983 1 65464148 65466090 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770057,nssv1771028,nssv1770077,nssv1771034,nssv1771050,nssv1770082,nssv1770053,nssv1771064,nssv1770054,nssv1771036,nssv1770060,nssv1771033,nssv1770074,nssv1770046,nssv1770075,nssv1770090,nssv1771056,nssv1771060,nssv1770056,nssv1770092,nssv1770059,nssv1770102,nssv1771049,nssv1771037,nssv1770070,nssv1770071,nssv1770064,nssv1770099,nssv1771048,nssv1770103,nssv1770048,nssv1770095,nssv1770047,nssv1771058,nssv1771052,nssv1770087,nssv1770063,nssv1771063,nssv1770049,nssv1770101,nssv1770051,nssv1771065,nssv1770061,nssv1770091,nssv1770066,nssv1770084,nssv1770052,nssv1771046,nssv1770058,nssv1770081,nssv1770062,nssv1771045,nssv1770065,nssv1771042,nssv1771054,nssv1770098,nssv1771053,nssv1770079,nssv1771047,nssv1770076,nssv1771055,nssv1771031,nssv1770050,nssv1770080,nssv1771051,nssv1771038,nssv1770067,nssv1771030,nssv1770055,nssv1770069,nssv1770068,nssv1770085,nssv1771062,nssv1770083,nssv1771040,nssv1770100,nssv1770078,nssv1771043,nssv1771035,nssv1771039,nssv1770094,nssv1771059,nssv1770097,nssv1770072,nssv1771029,nssv1770088,nssv1770093,nssv1771057,nssv1771032,nssv1771041,nssv1771061,nssv1770086,nssv1771044,nssv1770073,nssv1770096,nssv1771066,nssv1770089 M 97 10 0 AK4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945984 1 65466717 65468149 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771069,nssv1771075,nssv1771074,nssv1771071,nssv1771073,nssv1771067,nssv1771076,nssv1771077,nssv1771068,nssv1771072,nssv1771070 M 97 10 0 AK4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv830070 1 65572509 65755242 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446984 M 95 1 0 DNAJC6,LEPR,LEPROT nsv472107 1 65586006 65586006 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015239 M 9 1 0 DNAJC6 NA18555 nsv528808 1 65624347 65751505 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705482 M 2026 1 0 DNAJC6,LEPR,LEPROT dgv174n100 1 65624652 65744666 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998968,nsv1008025,nsv1008606,nsv1005247 M 29084 5 0 DNAJC6,LEPR,LEPROT nsv997944 1 65627431 65681070 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701245 M 29084 1 0 DNAJC6,LEPR,LEPROT nsv546438 1 65634386 65722644 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716140 M 17421 1 0 DNAJC6,LEPR,LEPROT nsv830081 1 65658668 65835388 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1446995 M 95 1 0 LEPR,LEPROT esv2521430 1 65681660 65683129 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5360102 M 1 0 1 LEPR NA18507 esv2015767 1 65682018 65682685 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4727227 M 1 0 1 LEPR NA18507 esv4385 1 65682192 65682549 CNV loss Wang_et_al_2008 18987735 Sequencing essv26826 M 1 0 1 LEPR YH esv2630441 1 65682225 65682494 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5309866 M 1 0 1 LEPR NA18507 nsv160318 1 65682227 65682496 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178896 M 24 LEPR nsv1176 1 65685290 65730158 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9232 M 9 0 1 LEPR NA12156 nsv823109 1 65695844 65796908 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431078 M 31 1 0 LEPR AK18 nsv1012476 1 65697335 65722466 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701248 M 29084 0 1 LEPR esv2763314 1 65704492 65744678 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7027980 M 1109 0 1 LEPR SW_0072 nsv461705 1 65708082 65772622 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538062 M 1557 1 0 LEPR HGDP00972 nsv546439 1 65708082 65772622 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173005 M 17421 1 0 LEPR HGDP00972 esv2615796 1 65710713 65710886 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5352107 M 1 0 1 LEPR NA18507 nsv508260 1 65755900 65774886 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620131 M 4 0 1 LEPR NA15510 nsv1188 1 65769214 65820514 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9242,nssv4273 M 9 0 2 LEPR NA12156,NA12878 nsv436459 1 65796348 65803176 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465995 M 2 0 1 LEPR NA18505 nsv498671 1 65796761 65802871 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585383 M 9 0 1 LEPR nsv1005451 1 65810517 65944594 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473637 M 29084 1 0 LEPR esv2580170 1 65813019 65817261 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5341924 M 1 0 1 LEPR NA18507 esv1978491 1 65813346 65816686 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4536103 M 1 0 1 LEPR NA18507 esv28812 1 65813514 65816341 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11383 M 40 0 4 LEPR NA18508,NA19099,NA19129,NA19225 esv2464074 1 65813781 65815781 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5382418 M 1 0 1 LEPR NA18507 esv2572647 1 65827186 65828213 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5386875 M 1 1 0 LEPR NA18507 esv1474810 1 65828529 65828529 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3913332 M 2 1 0 LEPR HuRef esv2079710 1 65850691 65851118 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4846369 M 1 0 1 LEPR NA18507 esv9112 1 65851458 65852175 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31553 M 1 0 0 LEPR esv5181 1 65851669 65852098 CNV loss Wang_et_al_2008 18987735 Sequencing essv27622 M 1 0 1 LEPR YH nsv819065 1 65872786 65873068 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419647 M 2 0 1 LEPR AK1 esv6029 1 65908033 65908828 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28470 M 1 0 0 "" esv2361197 1 65908106 65908827 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4885197 M 1 0 1 "" NA18507 nsv474728 1 65911798 65911798 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010868 M 9 1 0 "" NA19240 esv3389130 1 65937192 65937216 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863712 M 185 1 0 "" NA12005 nsv437212 1 65942267 65957991 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467093 M 60 0 1 "" NA19142 nsv516036 1 65942950 65944594 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689389,nssv665855,nssv687281,nssv670460,nssv660026,nssv671693 M 2026 0 6 "" nsv159449 1 65946974 65950272 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178027 M 24 "" dgv3n17 1 65994344 66044724 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437215,nsv437214 M 60 0 2 PDE4B NA18860,NA19173 nsv437216 1 66030004 66044724 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467097 M 60 0 1 PDE4B NA18857 esv2584680 1 66035819 66037451 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5351160 M 1 0 1 PDE4B NA18507 esv1957663 1 66036414 66036991 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4512901 M 1 0 1 PDE4B NA18507 esv4724 1 66036433 66037080 CNV loss Wang_et_al_2008 18987735 Sequencing essv27165 M 1 0 1 PDE4B YH esv2449251 1 66036498 66036830 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5279125 M 1 0 1 PDE4B NA18507 nsv160460 1 66036498 66036830 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179038 M 24 PDE4B nsv1014111 1 66127955 66155591 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701249 M 29084 0 1 PDE4B nsv998127 1 66277245 66307819 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465891 M 29084 0 1 PDE4B esv3306072 1 66283971 66283972 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7754704,essv7740626 M 185 2 0 PDE4B NA18504,NA18861 esv3365990 1 66283983 66284021 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899277,essv8899278 M 185 2 0 PDE4B NA18504,NA18861 esv25256 1 66297831 66300355 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16110 M 40 0 1 PDE4B NA15510 esv3402340 1 66334864 66334883 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594624 M 185 1 0 PDE4B NA19143 nsv506931 1 66337924 66343924 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619233 M 4 0 0 PDE4B NA10860 esv2764244 1 66397075 66402210 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005403,essv7005405,essv7005404,essv7005402 M 1109 0 4 PDE4B RW_0088,RW_0189,RW_0234,RW_0540 nsv475416 1 66414564 66414564 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016771 M 9 1 0 PDE4B NA19240 esv2762148 1 66434887 66463893 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005406 M 1109 1 0 PDE4B RW_0217 nsv1199 1 66474568 66497208 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4283 M 9 1 0 PDE4B NA12878 nsv461716 1 66508189 66539329 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538073 M 1557 1 0 PDE4B HGDP01099 nsv546440 1 66508189 66539329 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173006 M 17421 1 0 PDE4B HGDP01099 nsv159464 1 66601539 66601678 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178042 M 24 PDE4B nsv159040 1 66601844 66603938 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177618 M 24 PDE4B nsv518353 1 66623735 66635080 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694063 M 2026 0 1 "" nsv521150 1 66623735 66677729 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694421 M 2026 0 1 "" nsv520534 1 66629612 66638629 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697473 M 2026 1 0 "" nsv461729 1 66717946 66735494 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538086 M 1557 0 1 "" HGDP00643 nsv461740 1 66728466 66741672 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538097 M 1557 0 1 "" 1798860592_A nsv546441 1 66728466 66741672 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173007 M 17421 0 1 "" 1798860592_A esv23553 1 66731739 66732462 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11500 M 40 1 0 "" NA18511 esv8134 1 66731849 66732028 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30575 M 1 0 0 "" nsv524963 1 66733303 66733710 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700984 M 2026 0 1 "" nsv546442 1 66733303 66742956 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716141 M 17421 0 1 "" nsv480062 1 66734748 66734748 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018487 M 9 0 0 "" esv3338442 1 66747581 66747587 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863713 M 185 1 0 "" NA12005 nsv518465 1 66758965 66761174 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694064 M 2026 1 0 "" nsv1210 1 66789883 66805791 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9249 M 9 0 1 SGIP1 NA12156 nsv1013351 1 66812318 66828525 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474860 M 29084 1 0 SGIP1 dgv175n100 1 66815708 66839707 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003016,nsv1013476 M 29084 2 0 SGIP1 nsv1221 1 66820496 66865284 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7152 M 9 0 1 SGIP1 NA12156 nsv1232 1 66845498 66861033 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2965 M 9 1 0 SGIP1 NA18555 nsv160302 1 66851605 66853397 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178880 M 24 SGIP1 nsv830093 1 66946182 67120852 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447006 M 95 1 0 INSL5,SGIP1,TCTEX1D1,WDR78 esv997677 1 66959263 66966868 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565597 M 3 0 1 SGIP1 HuRef esv2571464 1 66973113 66974678 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5235477 M 1 0 1 SGIP1 NA18507 esv6908 1 66973557 66974333 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29349 M 1 0 0 SGIP1 esv2094631 1 66973618 66974337 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4654863 M 1 0 1 SGIP1 NA18507 esv4277 1 66973748 66974211 CNV loss Wang_et_al_2008 18987735 Sequencing essv26718 M 1 0 1 SGIP1 YH esv3893623 1 66995095 67046589 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25787889,essv25787886,essv25788687 M 3017 3 0 INSL5,TCTEX1D1 esv1009176 1 67000464 67004528 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565004 M 3 0 1 TCTEX1D1 HuRef esv3354383 1 67027812 67027827 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899280,essv8899279,essv8899286,essv8899285,essv8899282,essv8899283,essv8899284,essv8899287 M 185 8 0 "" NA18502,NA18523,NA18861,NA18870,NA18909,NA19138,NA19147,NA19257 nsv818200 1 67041230 67054777 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417530 M 112 1 0 WDR78 NA18968 nsv546443 1 67041230 67125548 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716142 M 17421 0 1 WDR78 esv3893634 1 67047615 67066731 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25798486,essv25780693 M 3017 0 2 WDR78 nsv546444 1 67051782 67066731 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716143 M 17421 0 1 WDR78 nsv519580 1 67054777 67066731 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv676630,nssv705456,nssv677440,nssv656960,nssv662919,nssv698683,nssv662308 M 2026 0 7 WDR78 esv3398423 1 67196715 67196721 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674069,essv8674070 M 185 2 0 MIER1 NA19239,NA19240 esv3309013 1 67196716 67196717 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838397,essv7838115 M 185 2 0 MIER1 NA12878,NA12891 nsv461751 1 67252186 67461624 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538108 M 1557 0 1 C1orf141,IL23R,SLC35D1 HGDP01099 nsv546445 1 67252186 67461624 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173008 M 17421 0 1 C1orf141,IL23R,SLC35D1 HGDP01099 nsv506932 1 67267745 67273745 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619234 M 4 0 0 SLC35D1 NA10860 nsv461762 1 67323797 67421048 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538118 M 1557 1 0 C1orf141,IL23R HGDP01368 nsv546446 1 67323797 67421048 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173009 M 17421 1 0 C1orf141,IL23R HGDP01368 nsv1243 1 67472877 67517925 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7157 M 9 0 1 IL23R NA12156 esv3344130 1 67518231 67518231 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740978 M 185 1 0 "" NA19240 nsv10228 1 67564981 67568759 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19763 M 31 1 0 IL12RB2 NA18972 nsv461773 1 67594965 67681232 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538129 M 1557 0 1 IL12RB2,SERBP1 HGDP00047 nsv546447 1 67594965 67681232 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173010 M 17421 0 1 IL12RB2,SERBP1 HGDP00047 nsv1254 1 67632752 67666617 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1162 M 9 1 0 IL12RB2,SERBP1 NA19240 nsv945985 1 67649278 67652627 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771087,nssv1769109,nssv1769104,nssv1771101,nssv1769106,nssv1771126,nssv1771099,nssv1771127,nssv1771107,nssv1771115,nssv1771109,nssv1771130,nssv1771090,nssv1769090,nssv1771093,nssv1769112,nssv1771081,nssv1771120,nssv1769102,nssv1769084,nssv1771088,nssv1769085,nssv1771080,nssv1771117,nssv1771100,nssv1769116,nssv1771085,nssv1771116,nssv1769099,nssv1769088,nssv1771086,nssv1769107,nssv1771096,nssv1771114,nssv1769098,nssv1769089,nssv1769105,nssv1769093,nssv1771098,nssv1771134,nssv1771102,nssv1771128,nssv1771094,nssv1769094,nssv1769103,nssv1771132,nssv1771106,nssv1769113,nssv1769101,nssv1769108,nssv1771083,nssv1769114,nssv1771095,nssv1769095,nssv1769100,nssv1771111,nssv1771089,nssv1771135,nssv1771082,nssv1771104,nssv1771079,nssv1769110,nssv1771084,nssv1769111,nssv1771097,nssv1771110,nssv1771091,nssv1769083,nssv1771092,nssv1771121,nssv1769097,nssv1771139,nssv1771122,nssv1771123,nssv1771133,nssv1771078,nssv1769092,nssv1771108,nssv1771138,nssv1771136,nssv1771124,nssv1771112,nssv1771113,nssv1771125,nssv1769115,nssv1771131,nssv1771137,nssv1769096,nssv1771103,nssv1769091,nssv1769086,nssv1771118,nssv1771105,nssv1771119,nssv1769087,nssv1771140,nssv1771129 M 97 10 0 SERBP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv524576 1 67710339 67718990 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700532 M 2026 1 0 "" esv2763315 1 67721964 67750002 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7027991 M 1109 1 0 "" SW_0775 nsv511696 1 67780119 67781599 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626336 M 1 0 1 "" 1 esv2439079 1 67780237 67782314 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5171405 M 1 0 1 "" NA18507 esv9709 1 67780356 67781651 CNV loss Ahn_et_al_2009 19470904 Sequencing essv32150 M 1 0 0 "" esv2238529 1 67780381 67781605 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4724128 M 1 0 1 "" NA18507 esv3800 1 67780524 67781508 CNV loss Wang_et_al_2008 18987735 Sequencing essv26241 M 1 0 1 "" YH dgv49n67 1 67780751 67781513 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv823131,nsv823120 M 31 11 0 "" AK10,AK14,AK6,NA18537,NA18552,NA18564,NA18942,NA18951,NA18972,NA18973,NA18999 nsv821071 1 67780751 67781513 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420369 M 1 0 1 "" NA10851 nsv1265 1 67807848 67831620 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2160 M 9 1 0 "" NA18555 esv33021 1 67813930 67814120 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv99498 M 51 0 1 "" 22335 esv32529 1 67843002 67843810 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99297 M 51 1 0 "" 22275 esv33652 1 67843693 67843997 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv92756,essv97866,essv100924 M 51 3 0 "" 21693,21837,21944 nsv517964 1 67843970 67846229 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695376 M 2026 0 1 "" nsv516001 1 67845515 67846229 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv678642,nssv665657,nssv692601 M 2026 0 3 "" nsv521648 1 67877774 67879093 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698266 M 2026 0 1 "" esv8115 1 67888119 67888273 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30556 M 1 0 0 "" nsv945986 1 67891416 67899015 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770122,nssv1769172,nssv1769131,nssv1770109,nssv1769120,nssv1769177,nssv1770125,nssv1769159,nssv1769129,nssv1769169,nssv1769148,nssv1769156,nssv1769124,nssv1770117,nssv1769126,nssv1769147,nssv1770118,nssv1770136,nssv1769135,nssv1769164,nssv1770127,nssv1770131,nssv1770126,nssv1769166,nssv1769118,nssv1769178,nssv1770120,nssv1770116,nssv1770119,nssv1769168,nssv1769137,nssv1769153,nssv1769134,nssv1770130,nssv1769145,nssv1769175,nssv1769122,nssv1770111,nssv1770121,nssv1770114,nssv1769127,nssv1770113,nssv1769119,nssv1769162,nssv1769125,nssv1769179,nssv1769128,nssv1769173,nssv1769121,nssv1770133,nssv1769133,nssv1770110,nssv1770124,nssv1769152,nssv1769146,nssv1770134,nssv1769136,nssv1769170,nssv1769132,nssv1770112,nssv1769139,nssv1770115,nssv1769123,nssv1769160,nssv1770123,nssv1769142,nssv1769141,nssv1769154,nssv1769138,nssv1770129,nssv1769130,nssv1769157,nssv1770106,nssv1769171,nssv1769167,nssv1769163,nssv1769165,nssv1769117,nssv1770128,nssv1770104,nssv1769158,nssv1769149,nssv1770132,nssv1769150,nssv1769144,nssv1769176,nssv1770137,nssv1770107,nssv1769140,nssv1769161,nssv1770108,nssv1769155,nssv1769143,nssv1770105,nssv1769174,nssv1770135,nssv1769151 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv471886 1 67912305 67912305 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018970 M 9 1 0 "" NA18555 nsv1276 1 67922224 67936256 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7165 M 9 0 1 GADD45A NA12156 esv1336934 1 67948197 67948273 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4133130 M 2 0 1 GNG12 HuRef esv1542404 1 67948375 67948477 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3663832 M 2 0 1 GNG12 HuRef esv3365929 1 67981130 67981182 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674071 M 185 1 0 GNG12 NA19238 esv3308903 1 67981139 67981140 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839013 M 185 1 0 GNG12 NA19238 esv3350914 1 68016182 68016484 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670905,essv8670906 M 185 2 0 GNG12 NA19238,NA19239 nsv830104 1 68037921 68208334 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447017 M 95 1 0 GNG12,GNG12-AS1 nsv546448 1 68310856 68415679 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716144 M 17421 1 0 GNG12-AS1,WLS nsv517355 1 68349987 68354587 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv679212,nssv678466,nssv658487,nssv684789,nssv658373,nssv669543,nssv654659,nssv685631,nssv679887,nssv653232,nssv701342,nssv676840,nssv670773,nssv677716,nssv695869,nssv672344,nssv669618,nssv651879,nssv681325,nssv652333,nssv677762,nssv690120,nssv666740,nssv658667,nssv682691,nssv701730,nssv673300,nssv651805,nssv654685,nssv669270,nssv675437,nssv688322,nssv667280,nssv673553,nssv672613,nssv678266,nssv687389 M 2026 2 35 GNG12-AS1,WLS nsv522414 1 68354428 68355170 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695197 M 2026 0 1 GNG12-AS1,WLS nsv477165 1 68365306 68365306 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011942 M 9 1 0 GNG12-AS1,WLS NA18517 nsv945987 1 68398855 68400683 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770153,nssv1770183,nssv1770150,nssv1770181,nssv1770162,nssv1770204,nssv1770160,nssv1770229,nssv1770145,nssv1770231,nssv1770222,nssv1770199,nssv1770223,nssv1770201,nssv1770152,nssv1770198,nssv1770224,nssv1770207,nssv1770156,nssv1770205,nssv1770159,nssv1770226,nssv1770149,nssv1770225,nssv1770146,nssv1770192,nssv1770140,nssv1770165,nssv1770217,nssv1770170,nssv1770148,nssv1770188,nssv1770151,nssv1770180,nssv1770216,nssv1770191,nssv1770142,nssv1770202,nssv1770155,nssv1770210,nssv1770139,nssv1770233,nssv1770166,nssv1770232,nssv1770143,nssv1770163,nssv1770221,nssv1770194,nssv1770219,nssv1770187,nssv1770158,nssv1770138,nssv1770218,nssv1770185,nssv1770154,nssv1770178,nssv1770220,nssv1770213,nssv1770141,nssv1770184,nssv1770157,nssv1770208,nssv1770169,nssv1770211,nssv1770147,nssv1770173,nssv1770167,nssv1770195,nssv1770144,nssv1770193,nssv1770215,nssv1770214,nssv1770179,nssv1770161,nssv1770197,nssv1770206,nssv1770174,nssv1770230,nssv1770209,nssv1770175,nssv1770227,nssv1770186,nssv1770212,nssv1770234,nssv1770172,nssv1770200,nssv1770196,nssv1770182,nssv1770176,nssv1770203,nssv1770171,nssv1770177,nssv1770189,nssv1770190,nssv1770168,nssv1770228,nssv1770164 M 97 10 0 GNG12-AS1,WLS HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522557 1 68412941 68415679 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705939 M 2026 0 1 GNG12-AS1,WLS nsv518820 1 68426864 68440271 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696273 M 2026 0 1 GNG12-AS1,WLS nsv945988 1 68480743 68482692 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770316,nssv1770269,nssv1770266,nssv1770325,nssv1770256,nssv1770270,nssv1770242,nssv1770311,nssv1770253,nssv1770323,nssv1770250,nssv1770283,nssv1770319,nssv1770286,nssv1770257,nssv1770279,nssv1770321,nssv1770287,nssv1770249,nssv1770322,nssv1770314,nssv1770326,nssv1770243,nssv1770296,nssv1770248,nssv1770268,nssv1770264,nssv1770301,nssv1770315,nssv1770273,nssv1770313,nssv1770258,nssv1770239,nssv1770307,nssv1770244,nssv1770274,nssv1770259,nssv1770304,nssv1770245,nssv1770310,nssv1770254,nssv1770302,nssv1770320,nssv1770298,nssv1770236,nssv1770280,nssv1770252,nssv1770278,nssv1770240,nssv1770285,nssv1770263,nssv1770299,nssv1770255,nssv1770305,nssv1770318,nssv1770289,nssv1770251,nssv1770262,nssv1770237,nssv1770328,nssv1770247,nssv1770290,nssv1770317,nssv1770291,nssv1770246,nssv1770331,nssv1770312,nssv1770267,nssv1770241,nssv1770277,nssv1770238,nssv1770330,nssv1770329,nssv1770281,nssv1770260,nssv1770292,nssv1770275,nssv1770294,nssv1770308,nssv1770295,nssv1770324,nssv1770293,nssv1770327,nssv1770303,nssv1770284,nssv1770297,nssv1770276,nssv1770300,nssv1770306,nssv1770235,nssv1770309,nssv1770271,nssv1770265,nssv1770288,nssv1770261,nssv1770272,nssv1770282 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546449 1 68498495 68513837 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716145 M 17421 1 0 "" esv993659 1 68500474 68500474 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577299 M 3 1 0 "" HuRef nsv508014 1 68508792 68514792 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621468,nssv622289,nssv624211 M 4 0 0 "" NA10860,NA15510,NA18994 nsv506933 1 68553576 68559576 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619235,nssv617531,nssv623269,nssv620656 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 nsv945989 1 68613076 68613897 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770356,nssv1771343,nssv1770409,nssv1770408,nssv1770347,nssv1770358,nssv1771336,nssv1770403,nssv1770339,nssv1770332,nssv1770334,nssv1770400,nssv1770342,nssv1770406,nssv1770353,nssv1770376,nssv1770350,nssv1770373,nssv1770344,nssv1770394,nssv1770363,nssv1770362,nssv1770346,nssv1770366,nssv1770411,nssv1771348,nssv1771340,nssv1771350,nssv1770345,nssv1771347,nssv1770410,nssv1770369,nssv1770340,nssv1771345,nssv1771337,nssv1770365,nssv1770336,nssv1770383,nssv1770341,nssv1770367,nssv1770361,nssv1770397,nssv1770352,nssv1770393,nssv1771338,nssv1770399,nssv1770349,nssv1770380,nssv1770333,nssv1770398,nssv1770337,nssv1770370,nssv1770354,nssv1770385,nssv1770343,nssv1770359,nssv1771341,nssv1770395,nssv1770360,nssv1770368,nssv1770348,nssv1771352,nssv1770351,nssv1770384,nssv1771342,nssv1771349,nssv1771339,nssv1770402,nssv1770335,nssv1770382,nssv1770338,nssv1770396,nssv1770364,nssv1770387,nssv1770371,nssv1770407,nssv1770404,nssv1770386,nssv1770401,nssv1770379,nssv1770355,nssv1770388,nssv1770389,nssv1770372,nssv1771346,nssv1770390,nssv1770357,nssv1770375,nssv1770377,nssv1770405,nssv1770392,nssv1770391,nssv1770381,nssv1771344,nssv1770378,nssv1770374,nssv1771351 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546450 1 68643615 68704510 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716146 M 17421 1 0 RPE65 esv2124751 1 68660850 68661299 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4892699 M 1 0 1 "" NA18507 nsv1010367 1 68709107 68731263 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470751 M 29084 0 1 DEPDC1 nsv945990 1 68713863 68715699 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771375,nssv1771421,nssv1771367,nssv1771383,nssv1771381,nssv1771447,nssv1771361,nssv1771400,nssv1771374,nssv1771441,nssv1771360,nssv1771444,nssv1771437,nssv1771414,nssv1771362,nssv1771392,nssv1771371,nssv1771412,nssv1771434,nssv1771410,nssv1771384,nssv1771413,nssv1771438,nssv1771443,nssv1771365,nssv1771404,nssv1771377,nssv1771391,nssv1771355,nssv1771399,nssv1771433,nssv1771387,nssv1771368,nssv1771380,nssv1771432,nssv1771386,nssv1771431,nssv1771428,nssv1771382,nssv1771353,nssv1771356,nssv1771422,nssv1771357,nssv1771418,nssv1771373,nssv1771429,nssv1771359,nssv1771425,nssv1771358,nssv1771401,nssv1771370,nssv1770832,nssv1771372,nssv1771395,nssv1771369,nssv1771419,nssv1771363,nssv1771426,nssv1771354,nssv1771398,nssv1771436,nssv1771440,nssv1771364,nssv1771442,nssv1771435,nssv1771420,nssv1771439,nssv1771397,nssv1771366,nssv1771376,nssv1771430,nssv1771378,nssv1771446,nssv1771445,nssv1771406,nssv1771403,nssv1771389,nssv1771396,nssv1771424,nssv1771416,nssv1771394,nssv1771393,nssv1771423,nssv1771417,nssv1770831,nssv1771379,nssv1771405,nssv1771390,nssv1771408,nssv1771427,nssv1771411,nssv1771407,nssv1771409,nssv1771388,nssv1771415,nssv1771402,nssv1771385 M 97 10 0 DEPDC1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945991 1 68719751 68722500 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770919,nssv1770924,nssv1770854,nssv1770893,nssv1770853,nssv1770927,nssv1770913,nssv1770877,nssv1770855,nssv1770892,nssv1770861,nssv1770860,nssv1770862,nssv1770879,nssv1770840,nssv1770925,nssv1770914,nssv1770869,nssv1770864,nssv1770884,nssv1770851,nssv1770881,nssv1770918,nssv1770875,nssv1770841,nssv1770901,nssv1770912,nssv1770863,nssv1770857,nssv1770890,nssv1770843,nssv1770873,nssv1770911,nssv1770867,nssv1770835,nssv1770922,nssv1770915,nssv1770894,nssv1770847,nssv1770906,nssv1770844,nssv1770868,nssv1770848,nssv1770859,nssv1770850,nssv1770888,nssv1770839,nssv1770891,nssv1770846,nssv1770870,nssv1770838,nssv1770903,nssv1770836,nssv1770902,nssv1770834,nssv1770907,nssv1770910,nssv1770904,nssv1770842,nssv1770858,nssv1770916,nssv1770874,nssv1770852,nssv1770895,nssv1770849,nssv1770898,nssv1770845,nssv1770865,nssv1770917,nssv1770882,nssv1770837,nssv1770886,nssv1770872,nssv1770909,nssv1770929,nssv1770871,nssv1770878,nssv1770896,nssv1770921,nssv1770889,nssv1770856,nssv1770866,nssv1770923,nssv1770885,nssv1770926,nssv1770908,nssv1770928,nssv1770905,nssv1770833,nssv1770883,nssv1770880,nssv1770920,nssv1770897,nssv1770899,nssv1770887,nssv1770900,nssv1770876 M 97 10 0 DEPDC1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2629888 1 68792056 68794298 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5202361 M 1 0 1 "" NA18507 esv8102 1 68827838 68827989 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30543 M 1 0 0 "" esv3302827 1 68827907 68828053 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7734856,essv7736757,essv7731978,essv7735822,essv7732579,essv7735239,essv7731896,essv7732666,essv7735759,essv7734305,essv7738121,essv7733817,essv7735656,essv7735689,essv7737697,essv7734018,essv7733673,essv7738821,essv7732403,essv7735405,essv7737046,essv7732813 M 185 22 0 "" NA11831,NA11918,NA11995,NA12044,NA12144,NA12717,NA12749,NA12751,NA12776,NA12828,NA18502,NA18517,NA18519,NA18523,NA18558,NA18861,NA18870,NA18907,NA18965,NA19108,NA19147,NA19225 nsv522218 1 68843040 68859905 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694145 M 2026 0 1 "" nsv527722 1 68984641 69095810 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704203 M 2026 0 1 "" esv1532177 1 69003210 69003348 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3655409 M 2 0 1 "" HuRef nsv508271 1 69295310 69319957 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620132 M 4 0 1 "" NA15510 nsv508015 1 69312908 69318908 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624212 M 4 0 0 "" NA18994 esv9447 1 69314255 69314439 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31888 M 1 0 0 "" nsv830115 1 69366082 69509583 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447028 M 95 1 0 "" nsv1287 1 69421303 69456215 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4293 M 9 1 0 "" NA12878 nsv1299 1 69459815 69504813 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7173 M 9 0 1 "" NA12156 nsv1310 1 69526124 69571221 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7182 M 9 0 1 "" NA12156 nsv1321 1 69573626 69619442 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6648 M 9 0 1 "" NA12156 esv2616575 1 69579218 69580942 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5193894 M 1 0 1 "" NA18507 esv2135896 1 69579389 69580084 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4789933 M 1 0 1 "" NA18507 esv5500 1 69579400 69580118 CNV loss Ahn_et_al_2009 19470904 Sequencing essv27941 M 1 0 0 "" esv3304 1 69579478 69580017 CNV loss Wang_et_al_2008 18987735 Sequencing essv25745 M 1 0 1 "" YH nsv160388 1 69579581 69579899 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178966 M 24 "" esv1191966 1 69579592 69579911 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3657881 M 2 0 1 "" HuRef nsv1332 1 69666943 69677806 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7197 M 9 0 1 "" NA12156 nsv546451 1 69667437 69748248 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716147 M 17421 1 0 "" esv6225 1 69716121 69716891 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28666 M 1 0 0 "" esv2271565 1 69716134 69716806 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4677248 M 1 0 1 "" NA18507 esv4719 1 69716232 69716670 CNV loss Wang_et_al_2008 18987735 Sequencing essv27160 M 1 0 1 "" YH esv2518942 1 69716304 69716609 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5276111 M 1 0 1 "" NA18507 esv1350326 1 69716313 69716619 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4163751 M 2 0 1 "" HuRef nsv436273 1 69768614 69775243 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466006 M 2 0 1 "" NA18505 esv29466 1 69768981 69774797 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20770 M 40 0 3 "" NA18505,NA18517,NA19108 nsv830126 1 69787467 69940567 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447039 M 95 1 0 "" esv2599141 1 69799188 69800948 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5305113 M 1 0 1 "" NA18507 esv9169 1 69799643 69800321 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31610 M 1 0 0 "" esv2329340 1 69799746 69800448 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4894374 M 1 0 1 "" NA18507 esv2548607 1 69827280 69827386 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5174702 M 1 0 1 "" NA18507 esv3344674 1 69834244 69834258 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674073,essv8674072,essv8674074 M 185 3 0 "" NA12878,NA12891,NA12892 esv3342606 1 69840745 69840770 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899291,essv8899293,essv8899288,essv8899290,essv8899289 M 185 5 0 "" NA18498,NA18501,NA18522,NA18853,NA19116 esv3307159 1 69840755 69840756 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7744559,essv7746136,essv7758316,essv7754089,essv7759953,essv7760363,essv7750292,essv7761574 M 185 8 0 "" NA18498,NA18501,NA18522,NA18853,NA19116,NA19238,NA19239,NA19240 esv3308725 1 69840760 69840761 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837549,essv7836896 M 185 2 0 "" NA19239,NA19240 esv3387390 1 69840762 69840772 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674077,essv8674075,essv8674078 M 185 3 0 "" NA19238,NA19239,NA19240 esv3340902 1 69863635 69863654 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594657,essv9594669,essv9594691,essv9594680 M 185 4 0 "" NA12249,NA12815,NA12872,NA18970 esv3309280 1 69863644 69863645 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838559 M 185 1 0 "" NA19238 esv3432131 1 69863647 69863662 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674079,essv8674080 M 185 2 0 "" NA19238,NA19240 esv3325039 1 69866069 69866125 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899295,essv8899294 M 185 2 0 "" NA07000,NA10847 esv3307014 1 69866076 69866077 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7743399,essv7748492,essv7762813 M 185 3 0 "" NA07000,NA10847,NA12891 esv3309517 1 69866101 69866102 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837291,essv7838504,essv7837219 M 185 3 0 "" NA19238,NA19239,NA19240 esv3372422 1 69866125 69866193 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674081 M 185 1 0 "" NA12891 esv3380785 1 69878951 69878988 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899296,essv8899298,essv8899299,essv8899301,essv8899300,essv8899297 M 185 6 0 "" NA18511,NA18519,NA18871,NA19102,NA19108,NA19138 esv3303250 1 69878966 69878967 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7743930,essv7746824,essv7742368,essv7755936,essv7741367,essv7755330 M 185 6 0 "" NA18511,NA18519,NA18871,NA19102,NA19108,NA19138 esv2764189 1 69884477 69910101 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005408,essv7005409,essv7005407,essv7005410 M 1109 4 0 "" RW_0106,RW_0187,RW_0361,RW_0603 dgv176n100 1 69921282 69955166 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998121,nsv1010921 M 29084 0 3 "" nsv461784 1 70004123 70078833 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538136 M 1557 0 1 LRRC7 HGDP01285 nsv546452 1 70004123 70078833 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173011 M 17421 0 1 LRRC7 HGDP01285 esv3305104 1 70013133 70013134 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7761516,essv7749725,essv7752876 M 185 3 0 LRRC7 NA18499,NA18505,NA19093 esv3383107 1 70013134 70013163 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899302,essv8899304,essv8899305 M 185 3 0 LRRC7 NA18499,NA18505,NA19093 nsv521307 1 70055463 70061235 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697913 M 2026 0 1 LRRC7 esv2617051 1 70130092 70131918 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5170751 M 1 0 1 LRRC7 NA18507 nsv525370 1 70134421 70139675 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701490 M 2026 0 1 LRRC7 esv3382626 1 70154020 70154714 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652096 M 185 1 0 LRRC7 NA19240 esv3452085 1 70154176 70154520 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808975 M 185 1 0 LRRC7 NA12878 esv1094257 1 70154389 70154389 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4313496 M 2 1 0 LRRC7 HuRef esv1056018 1 70154433 70154433 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3635647 M 2 1 0 LRRC7 HuRef nsv512742 1 70154435 70155149 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625369 M 1 1 0 LRRC7 1 esv3448225 1 70184923 70184942 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594702,essv9594713 M 185 2 0 LRRC7 NA11840,NA11918 nsv526839 1 70232474 70248382 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703196 M 2026 1 0 LRRC7 dgv18n27 1 70248382 70339569 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv461806,nsv461795 M 1557 0 2 LRRC7 1780862003_A,1780862459_A dgv305n54 1 70248382 70339569 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546454,nsv546453 M 17421 0 2 LRRC7 1780862003_A,1780862459_A nsv1005397 1 70371391 70407173 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473571 M 29084 1 0 LRRC40 nsv823143 1 70420622 70422873 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1435658,nssv1428031 M 31 0 2 LRRC40 AK10,NA18566 nsv1343 1 70437757 70469588 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10021 M 9 1 0 LRRC40,SRSF11 NA18956 nsv1014292 1 70461803 70571653 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476718 M 29084 1 0 ANKRD13C,SRSF11 nsv473705 1 70519477 70519477 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014602 M 9 1 0 ANKRD13C NA19129 nsv1012563 1 70525920 70604706 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473337 M 29084 1 0 ANKRD13C,HHLA3 nsv830137 1 70538509 70731306 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447050 M 95 0 1 ANKRD13C,CTH,HHLA3 esv2555384 1 70540011 70541453 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5363733 M 1 0 1 ANKRD13C NA18507 esv1997734 1 70540513 70541213 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4539725 M 1 0 1 ANKRD13C NA18507 esv4055 1 70540662 70541080 CNV loss Wang_et_al_2008 18987735 Sequencing essv26496 M 1 0 1 ANKRD13C YH esv27106 1 70593179 70597702 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11736 M 40 0 1 HHLA3 NA19225 nsv546455 1 70653305 70659771 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716148 M 17421 0 1 CTH nsv461828 1 70653305 70694948 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538174 M 1557 0 1 CTH 1782681216_A nsv546456 1 70653305 70694948 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173014 M 17421 0 1 CTH 1782681216_A nsv522935 1 70659771 70660689 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698598 M 2026 0 1 CTH nsv1002709 1 70688798 70712114 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465128 M 29084 0 1 "" esv2451764 1 70718037 70719760 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5236686 M 1 0 1 "" NA18507 esv7379 1 70718521 70719396 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29820 M 1 0 0 "" esv2293248 1 70718587 70719298 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4693930 M 1 0 1 "" NA18507 esv4053 1 70718749 70719245 CNV loss Wang_et_al_2008 18987735 Sequencing essv26494 M 1 0 1 "" YH esv1546564 1 70718793 70719124 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4252933 M 2 0 1 "" HuRef nsv472898 1 70720491 70720491 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017181 M 9 1 0 "" NA19129 esv3893645 1 70735956 70770398 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788305 M 3017 1 0 "" nsv945994 1 70768825 70775050 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770958,nssv1770979,nssv1770971,nssv1771014,nssv1770950,nssv1771959,nssv1770952,nssv1771001,nssv1771027,nssv1771003,nssv1770954,nssv1770991,nssv1770965,nssv1770997,nssv1771953,nssv1771022,nssv1770969,nssv1770947,nssv1770975,nssv1771019,nssv1771026,nssv1770993,nssv1771024,nssv1771963,nssv1771025,nssv1770996,nssv1770951,nssv1770977,nssv1771952,nssv1770995,nssv1770962,nssv1771015,nssv1770949,nssv1771004,nssv1770966,nssv1771008,nssv1771957,nssv1771023,nssv1771955,nssv1770990,nssv1770964,nssv1771965,nssv1770955,nssv1770973,nssv1770961,nssv1770974,nssv1770957,nssv1770994,nssv1770959,nssv1770970,nssv1770960,nssv1771967,nssv1770948,nssv1771005,nssv1771956,nssv1771007,nssv1770978,nssv1771002,nssv1770968,nssv1770981,nssv1770963,nssv1771016,nssv1770953,nssv1771017,nssv1770976,nssv1770988,nssv1770956,nssv1771011,nssv1770967,nssv1770980,nssv1771954,nssv1771020,nssv1770987,nssv1771012,nssv1770972,nssv1771964,nssv1771961,nssv1771000,nssv1770984,nssv1771006,nssv1771009,nssv1771966,nssv1770989,nssv1770982,nssv1771013,nssv1770992,nssv1770998,nssv1771960,nssv1771021,nssv1771018,nssv1770983,nssv1771958,nssv1771010,nssv1770986,nssv1770985,nssv1770999,nssv1771962 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1005909 1 70800739 70821935 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481892 M 29084 0 1 "" esv1583796 1 70885855 70885855 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4299396 M 2 1 0 "" HuRef esv33887 1 70894407 70897146 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv99773 M 51 0 1 "" 22086 nsv517877 1 70910524 70914790 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695284 M 2026 1 0 "" nsv526237 1 70914756 70918410 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702505 M 2026 0 1 "" esv2461343 1 70920779 70922258 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5290277 M 1 0 1 "" NA18507 esv2223167 1 70921221 70921812 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4762886 M 1 0 1 "" NA18507 esv24168 1 71009946 71012899 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17158 M 40 0 2 "" NA18858,NA18907 esv26722 1 71016694 71022161 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18463 M 40 0 1 "" NA12004 dgv306n54 1 71017730 71019431 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546458,nsv546457,nsv546463 M 17421 0 3 "" dgv307n54 1 71017730 71020871 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546460,nsv546464,nsv546459 M 17421 0 4 "" dgv308n54 1 71017730 71022073 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546466,nsv546469,nsv546467,nsv546465,nsv546461,nsv546462 M 17421 0 9 "" nsv546468 1 71018628 71020119 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716164 M 17421 0 1 "" nsv546470 1 71019031 71020786 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716166 M 17421 0 1 "" esv2763076 1 71075151 71087045 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7028002,essv7028013 M 1109 0 2 "" SW_1182,SW_1240 nsv516651 1 71077666 71079337 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv669897,nssv656299 M 2026 0 2 "" nsv830148 1 71082954 71256520 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447061 M 95 1 0 PTGER3 nsv546471 1 71136693 71241081 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716167 M 17421 0 1 PTGER3 esv994407 1 71141275 71144923 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565316 M 3 1 0 PTGER3 HuRef dgv177n100 1 71186884 71244463 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002842,nsv997350,nsv1007153,nsv1006266,nsv1003555 M 29084 0 14 PTGER3 esv2762149 1 71187723 71231561 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005413 M 1109 0 1 PTGER3 RW_0212 nsv516212 1 71194152 71241081 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv666846,nssv680621,nssv655781 M 2026 0 3 PTGER3 nsv546472 1 71205572 71313591 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716168 M 17421 1 0 MIR186,PTGER3,ZRANB2,ZRANB2-AS1 nsv461851 1 71215214 71280129 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538190 M 1557 1 0 PTGER3 HGDP01303 nsv546473 1 71215214 71280129 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173015 M 17421 1 0 PTGER3 HGDP01303 esv3342245 1 71224022 71224074 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7862072,essv7862073 M 185 2 0 PTGER3 NA12005,NA18871 esv3893657 1 71253182 71260723 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779204 M 3017 0 1 PTGER3 nsv945995 1 71289699 71292812 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772052,nssv1772041,nssv1772053,nssv1772016,nssv1771978,nssv1772017,nssv1771980,nssv1772038,nssv1771999,nssv1772001,nssv1771990,nssv1772035,nssv1771984,nssv1772034,nssv1771977,nssv1772009,nssv1771992,nssv1772005,nssv1771974,nssv1772036,nssv1771989,nssv1772012,nssv1772049,nssv1771995,nssv1771986,nssv1772029,nssv1771985,nssv1772031,nssv1771975,nssv1772032,nssv1771996,nssv1772011,nssv1771988,nssv1771994,nssv1771983,nssv1772000,nssv1772048,nssv1772020,nssv1771971,nssv1772002,nssv1771981,nssv1772014,nssv1772047,nssv1772024,nssv1771982,nssv1772019,nssv1772046,nssv1772059,nssv1771976,nssv1772028,nssv1771972,nssv1771998,nssv1771970,nssv1771993,nssv1771979,nssv1772018,nssv1772054,nssv1772026,nssv1772050,nssv1772008,nssv1772045,nssv1772025,nssv1771973,nssv1772060,nssv1771969,nssv1772023,nssv1771997,nssv1772030,nssv1771987,nssv1772042,nssv1772051,nssv1772006,nssv1772010,nssv1772055,nssv1772021,nssv1771991,nssv1772056,nssv1772003,nssv1772022,nssv1772015,nssv1772058,nssv1772064,nssv1772004,nssv1772013,nssv1772037,nssv1772040,nssv1771968,nssv1772062,nssv1772027,nssv1772063,nssv1772057,nssv1772033,nssv1772007,nssv1772061,nssv1772039,nssv1772043,nssv1772044 M 97 10 0 ZRANB2-AS1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv521769 1 71351030 71406307 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694536 M 2026 0 1 ZRANB2-AS2 nsv818211 1 71376291 71406307 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417325 M 112 1 0 ZRANB2-AS2 NA18608 nsv997782 1 71401364 71441494 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701252 M 29084 0 1 ZRANB2-AS2 nsv511697 1 71512212 71514999 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626337 M 1 0 1 "" 1 esv2595054 1 71513333 71514924 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5209205 M 1 0 1 "" NA18507 esv1921566 1 71513718 71514429 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4735718 M 1 0 1 "" NA18507 esv5496 1 71513720 71514441 CNV loss Ahn_et_al_2009 19470904 Sequencing essv27937 M 1 0 0 "" esv3994 1 71513842 71514290 CNV loss Wang_et_al_2008 18987735 Sequencing essv26435 M 1 0 1 "" YH esv997283 1 71513907 71514216 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572212 M 3 0 1 "" HuRef esv1633019 1 71513920 71514230 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3711044 M 2 0 1 "" HuRef nsv830159 1 71544896 71682448 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447074 M 95 1 0 NEGR1 nsv546474 1 71565809 71812942 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716169 M 17421 1 0 NEGR1 dgv19n27 1 71621625 71710282 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv461862,nsv461873 M 1557 2 0 NEGR1 HGDP01234,HGDP01242 nsv546475 1 71621625 71710282 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173017,nssv1173016 M 17421 2 0 NEGR1 HGDP01234,HGDP01242 nsv830170 1 71629035 71781346 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447085 M 95 1 0 NEGR1 nsv526840 1 71685500 71690707 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703197 M 2026 1 0 NEGR1 nsv1003527 1 71762146 71797824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466318 M 29084 0 1 NEGR1 dgv178n100 1 71770852 71794818 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001099,nsv1014047 M 29084 0 2 NEGR1 esv1009711 1 71809497 71814539 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563850 M 3 1 0 NEGR1 HuRef esv275261 1 71812942 71817568 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585672 M 1250 0 1 NEGR1 dgv309n54 1 71850137 72011279 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546477,nsv546476 M 17421 0 2 NEGR1 NINDS_130 nsv461895 1 71852486 71979387 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538221 M 1557 0 1 NEGR1 NINDS_130 esv2763317 1 71871749 71894173 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7028024 M 1109 0 1 NEGR1 SW_1437 nsv1008210 1 71871749 72146785 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477179 M 29084 0 1 NEGR1,NEGR1-IT1 nsv830181 1 71928571 72069166 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447096 M 95 1 0 NEGR1,NEGR1-IT1 esv2609491 1 71958516 71959877 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5225742 M 1 0 1 NEGR1 NA18507 esv2459000 1 72031207 72032271 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5381402 M 1 1 0 NEGR1 NA18507 esv1377110 1 72031535 72031535 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4231744 M 2 1 0 NEGR1 HuRef esv2762150 1 72043815 72168541 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005414 M 1109 0 1 NEGR1,NEGR1-IT1 RW_0536 esv3893668 1 72056794 72109501 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797673,essv25796050 M 3017 0 2 NEGR1,NEGR1-IT1 esv992761 1 72132309 72133477 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587168 M 3 0 1 NEGR1 HuRef esv27109 1 72132674 72133716 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11316 M 40 2 0 NEGR1 NA18511,NA18916 esv1246885 1 72166426 72166426 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3799312 M 2 1 0 NEGR1 HuRef nsv512743 1 72166628 72167707 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625370 M 1 1 0 NEGR1 1 nsv508016 1 72198917 72204917 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621469 M 4 0 0 NEGR1 NA15510 nsv1354 1 72203752 72248110 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2161 M 9 0 1 NEGR1 NA18555 nsv546478 1 72214606 72284979 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716171 M 17421 0 1 NEGR1 esv8759 1 72222068 72222832 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31200 M 1 0 0 NEGR1 esv4720 1 72222102 72222751 CNV loss Wang_et_al_2008 18987735 Sequencing essv27161 M 1 0 1 NEGR1 YH dgv50n67 1 72222105 72222572 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv823165,nsv823154 M 31 4 0 NEGR1 AK6,NA18949,NA18951,NA18999 nsv821519 1 72222105 72222572 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420380 M 1 0 1 NEGR1 NA10851 nsv818223 1 72249809 72255233 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417531 M 112 1 0 NEGR1 NA18968 nsv428454 1 72277057 72698844 CNV loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450265 M 62 0 1 NEGR1 NA19108 nsv1001732 1 72277898 72301454 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481092 M 29084 0 1 NEGR1 nsv546479 1 72282078 72328395 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716172 M 17421 0 1 NEGR1 esv3893679 1 72284979 72341897 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25781083 M 3017 0 1 NEGR1 esv2595732 1 72286214 72287290 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5282792 M 1 1 0 NEGR1 NA18507 esv3304727 1 72286692 72286693 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7772088,essv7790350,essv7801816,essv7792666,essv7783746,essv7782351,essv7776460,essv7804403,essv7796983,essv7786961,essv7830511,essv7819845,essv7825355,essv7784754,essv7810589,essv7774538,essv7796610,essv7775535,essv7831127,essv7817509,essv7791465,essv7784496,essv7832668,essv7803566,essv7786759,essv7826433,essv7816259,essv7795060,essv7804032,essv7798243,essv7829331,essv7770652,essv7816023,essv7794368,essv7831810,essv7822470,essv7786171,essv7812435,essv7781559,essv7815414 M 185 40 0 NEGR1 NA07347,NA11894,NA12006,NA12156,NA12815,NA12874,NA12878,NA18486,NA18499,NA18505,NA18511,NA18520,NA18526,NA18537,NA18545,NA18555,NA18561,NA18563,NA18564,NA18570,NA18572,NA18576,NA18592,NA18603,NA18609,NA18870,NA18916,NA18945,NA18951,NA18959,NA18964,NA18965,NA19093,NA19102,NA19108,NA19116,NA19138,NA19147,NA19190,NA19225 esv3309645 1 72286694 72286695 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839737 M 185 1 0 NEGR1 NA12878 esv2763318 1 72288305 72316279 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7028035 M 1109 0 1 NEGR1 SW_0816 nsv1013256 1 72313808 72392690 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474748 M 29084 0 1 NEGR1 dgv310n54 1 72322424 72490331 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546482,nsv546480,nsv546481 M 17421 0 4 NEGR1 dgv311n54 1 72354554 72439784 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546483,nsv546484 M 17421 0 2 NEGR1 nsv997768 1 72355963 72437856 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464438 M 29084 0 1 NEGR1 nsv470715 1 72379006 72432468 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547733 M 443 1 0 NEGR1 HGDP01301 nsv528210 1 72379006 72432468 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704771 M 2026 0 1 NEGR1 nsv1365 1 72383623 72402520 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7205 M 9 0 1 NEGR1 NA12156 dgv179n100 1 72388236 72430802 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998410,nsv1010315,nsv1009412,nsv999081,nsv1013666,nsv1000451 M 29084 0 10 NEGR1 nsv830192 1 72389150 72578706 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447118,nssv1447129,nssv1447107 M 95 3 0 NEGR1 nsv516389 1 72394051 72429646 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv691817,nssv667959 M 2026 0 2 NEGR1 nsv461951 1 72407500 72479814 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538258 M 1557 0 1 NEGR1 HGDP01337 dgv312n54 1 72407500 72501730 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546486,nsv546485 M 17421 0 2 NEGR1 HGDP01337 esv2528141 1 72410963 72411881 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5241865 M 1 1 0 NEGR1 NA18507 nsv508017 1 72485317 72491317 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622290 M 4 0 0 NEGR1 NA10860 nsv474891 1 72485473 72485473 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014059 M 9 1 0 NEGR1 NA18956 esv3443181 1 72490443 72490443 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825277 M 185 1 0 NEGR1 NA19240 dgv180n100 1 72506326 72535946 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008754,nsv1002724 M 29084 0 2 NEGR1 nsv1376 1 72507166 72595974 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5633,nssv9301,nssv2178,nssv4300,nssv9515,nssv6658,nssv10935,nssv10026 M 9 0 8 NEGR1 NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129 nsv254 1 72507579 72595782 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv254 M 1 0 1 NEGR1 NA15510 dgv181n100 1 72512541 72592603 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010225,nsv997271,nsv999300,nsv998162,nsv997689,nsv1002360,nsv1007840,nsv1013213,nsv1005389,nsv1007310,nsv1004504,nsv1007101,nsv1001214,nsv998364,nsv997734,nsv1008566,nsv1004319,nsv999271,nsv1008824,nsv1012170,nsv1011285,nsv1001416,nsv1014214,nsv1012292,nsv1012548,nsv1010247,nsv1001613 M 29084 168 0 NEGR1 nsv945996 1 72512555 72513188 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772150,nssv1772159,nssv1772143,nssv1772130,nssv1772067,nssv1772140,nssv1772142,nssv1772152,nssv1772066,nssv1772090,nssv1772145,nssv1772105,nssv1772087,nssv1772138,nssv1772074,nssv1772132,nssv1772147,nssv1772154,nssv1772094,nssv1772131,nssv1772078,nssv1772091,nssv1772075,nssv1772116,nssv1772080,nssv1772097,nssv1772086,nssv1772095,nssv1772072,nssv1772126,nssv1772083,nssv1772109,nssv1772068,nssv1772120,nssv1772093,nssv1772106,nssv1772096,nssv1772158,nssv1772151,nssv1772108,nssv1772070,nssv1772100,nssv1772144,nssv1772121,nssv1772079,nssv1772114,nssv1772069,nssv1772102,nssv1772149,nssv1772098,nssv1772076,nssv1772160,nssv1772146,nssv1772115,nssv1772085,nssv1772123,nssv1772073,nssv1772128,nssv1772071,nssv1772117,nssv1772082,nssv1772099,nssv1772084,nssv1772119,nssv1772081,nssv1772092,nssv1772089,nssv1772155,nssv1772077,nssv1772133,nssv1772148,nssv1772157,nssv1772127,nssv1772125,nssv1772139,nssv1772118,nssv1772088,nssv1772103,nssv1772124,nssv1772153,nssv1772134,nssv1772111,nssv1772129,nssv1772065,nssv1772113,nssv1772141,nssv1772135,nssv1772161,nssv1772112,nssv1772101,nssv1772122,nssv1772107,nssv1772104,nssv1772137,nssv1772110,nssv1772136,nssv1772156 M 97 10 0 NEGR1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2758939 1 72514984 72659401 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757734 M 270 3 14 NEGR1 NA07048,NA12005,NA12057,NA12144,NA12717,NA12812,NA12813,NA12864,NA18532,NA18547,NA18611,NA18621,NA18854,NA19099,NA19129,NA19132,NA19206 dgv182n100 1 72519109 72562187 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009061,nsv1000767,nsv1005892,nsv1006854,nsv1003067,nsv1010051 M 29084 8 0 NEGR1 dgv183n100 1 72519109 72575080 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002085,nsv1014112 M 29084 2 0 NEGR1 esv2764234 1 72519121 72585028 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005418,essv7005517,essv7005542,essv7005483,essv7005464,essv7005544,essv7005538,essv7005459,essv7005421,essv7005539,essv7005426,essv7005570,essv7005519,essv7005550,essv7005504,essv7005442,essv7005416,essv7005422,essv7005548,essv7005573,essv7005454,essv7005507,essv7005468,essv7005499,essv7005559,essv7005555,essv7005447,essv7005425,essv7005482,essv7005453,essv7005557,essv7005480,essv7005536,essv7005435,essv7005429,essv7005465,essv7005436,essv7005546,essv7005433,essv7005440,essv7005474,essv7005430,essv7005531,essv7005431,essv7005574,essv7005438,essv7005532,essv7005487,essv7005492,essv7005506,essv7005510,essv7005575,essv7005460,essv7005495,essv7005533,essv7005479,essv7005562,essv7005437,essv7005469,essv7005458,essv7005513,essv7005503,essv7005551,essv7005502,essv7005558,essv7005472,essv7005452,essv7005470,essv7005427,essv7005541,essv7005543,essv7005496,essv7005477,essv7005493,essv7005420,essv7005571,essv7005432,essv7005490,essv7005552,essv7005497,essv7005561,essv7005450,essv7005485,essv7005486,essv7005461,essv7005498,essv7005524,essv7005572,essv7005448,essv7005428,essv7005566,essv7005508,essv7005528,essv7005419,essv7005476,essv7005494,essv7005451,essv7005455,essv7005491,essv7005481,essv7005565,essv7005518,essv7005514,essv7005509,essv7005439,essv7005560,essv7005553,essv7005554,essv7005530,essv7005537,essv7005471,essv7005424,essv7005564,essv7005579,essv7005475,essv7005512,essv7005466,essv7005505,essv7005441,essv7005449,essv7005521,essv7005516,essv7005415,essv7005443,essv7005488,essv7005484,essv7005535,essv7005529,essv7005525,essv7005576,essv7005568,essv7005527,essv7005515,essv7005446,essv7005549,essv7005526,essv7005463,essv7005569,essv7005563,essv7005462,essv7005457,essv7005473,essv7005547,essv7005577,essv7005540,essv7005417,essv7005444,essv7005501,essv7005520 M 1109 1 148 NEGR1 RW_0002,RW_0007,RW_0010,RW_0013,RW_0017,RW_0023,RW_0025,RW_0028,RW_0033,RW_0036,RW_0045,RW_0046,RW_0047,RW_0054,RW_0056,RW_0058,RW_0059,RW_0061,RW_0063,RW_0064,RW_0069,RW_0071,RW_0077,RW_0078,RW_0079,RW_0080,RW_0090,RW_0091,RW_0096,RW_0101,RW_0105,RW_0108,RW_0111,RW_0113,RW_0116,RW_0123,RW_0124,RW_0131,RW_0132,RW_0137,RW_0139,RW_0140,RW_0144,RW_0145,RW_0146,RW_0147,RW_0148,RW_0152,RW_0156,RW_0162,RW_0170,RW_0173,RW_0181,RW_0183,RW_0185,RW_0190,RW_0192,RW_0194,RW_0195,RW_0196,RW_0208,RW_0210,RW_0213,RW_0221,RW_0222,RW_0224,RW_0234,RW_0237,RW_0249,RW_0250,RW_0255,RW_0258,RW_0262,RW_0270,RW_0273,RW_0275,RW_0279,RW_0289,RW_0296,RW_0306,RW_0307,RW_0308,RW_0309,RW_0312,RW_0315,RW_0316,RW_0320,RW_0321,RW_0324,RW_0326,RW_0328,RW_0334,RW_0335,RW_0344,RW_0357,RW_0358,RW_0500,RW_0502,RW_0504,RW_0505,RW_0507,RW_0519,RW_0521,RW_0527,RW_0530,RW_0532,RW_0534,RW_0535,RW_0536,RW_0539,RW_0540,RW_0543,RW_0544,RW_0550,RW_0552,RW_0553,RW_0560,RW_0568,RW_0570,RW_0575,RW_0576,RW_0577,RW_0578,RW_0581,RW_0582,RW_0587,RW_0593,RW_0595,RW_0599,RW_0600,RW_0601,RW_0602,RW_0607,RW_0608,RW_0611,RW_0614,RW_0622,RW_0625,RW_0626,RW_0630,RW_0634,RW_0635,RW_0644,RW_0650,RW_0652,RW_0656,RW_0662,RW_0665,RW_0667 esv33679 1 72519167 72523215 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99853,essv98657,essv93634 M 51 3 0 NEGR1 21606,21972,22086 esv2762743 1 72522436 72595424 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7031690,essv7030080,essv7028890,essv7030213,essv7030579,essv7029379,essv7028102,essv7030056,essv7030202,essv7031590,essv7029956,essv7029390,essv7032112,essv7031479,essv7032101,essv7028080,essv7031279,essv7029102,essv7028124,essv7029257,essv7031390,essv7029657,essv7029424,essv7029191,essv7029857,essv7031512,essv7030723,essv7030812,essv7029535,essv7030413,essv7029823,essv7032001,essv7029912,essv7030279,essv7030346,essv7031045,essv7032023,essv7031823,essv7031167,essv7031490,essv7031145,essv7028790,essv7028757,essv7029790,essv7030557,essv7031001,essv7030424,essv7031379,essv7031723,essv7030546,essv7030191,essv7030901,essv7029413,essv7029357,essv7028479,essv7031890,essv7030890,essv7031746,essv7031235,essv7029290,essv7031734,essv7030923,essv7031712,essv7029579,essv7029557,essv7029313,essv7031834,essv7031990,essv7028969,essv7029368,essv7030102,essv7030823,essv7028390,essv7031012,essv7028535,essv7031357,essv7030224,essv7029490,essv7030290,essv7031812,essv7028779,essv7028179,essv7031156,essv7028945,essv7028046,essv7028246,essv7031346,essv7029945,essv7030779,essv7028857,essv7032090,essv7030435,essv7030235,essv7029013,essv7028801,essv7029468,essv7031635,essv7028413,essv7029679,essv7028268,essv7030857,essv7031335,essv7029035,essv7029179,essv7030357,essv7028512,essv7028546,essv7028235,essv7028224,essv7028157,essv7031879,essv7031956,essv7031757,essv7029268,essv7029024,essv7031901,essv7030067,essv7029457,essv7030368,essv7030124,essv7029868,essv7030968,essv7029812,essv7031646,essv7030113,essv7028834,essv7029701,essv7028723,essv7029235,essv7031768,essv7028457,essv7028279,essv7031968,essv7030746,essv7030446,essv7028490,essv7030879,essv7030757,essv7030034,essv7030734,essv7029446,essv7029246,essv7031779,essv7031056,essv7028980,essv7031123,essv7028668,essv7031257,essv7031790,essv7030135,essv7028290,essv7030168,essv7028991,essv7029801,essv7028524,essv7030945,essv7029635,essv7029124,essv7031801,essv7029213,essv7028690,essv7031313,essv7029712,essv7029690,essv7031202,essv7031857,essv7029135,essv7031368,essv7028934,essv7028257,essv7030390,essv7031290,essv7028768,essv7030535,essv7030801,essv7028401,essv7028734,essv7030457,essv7029746,essv7030679,essv7030790,essv7032079,essv7029002,essv7030646,essv7028868,essv7031912,essv7029934,essv7028446,essv7030990,essv7028357,essv7029968,essv7029224,essv7030701,essv7031457,essv7030468,essv7029879,essv7031979,essv7029324,essv7028468,essv7029435,essv7028057,essv7029834,essv7028601,essv7030157,essv7030668,essv7028302,essv7030401,essv7030934,essv7031224,essv7031424,essv7029157,essv7029757,essv7028612,essv7028091,essv7029168,essv7030246,essv7029046,essv7031435,essv7031268,essv7031934,essv7029768,essv7029057,essv7030479,essv7028202,essv7031302,essv7028845,essv7030302,essv7030868,essv7029623,essv7030834,essv7028635,essv7031923,essv7029612,essv7028557,essv7029524,essv7028679,essv7028912,essv7031945,essv7030379,essv7030601,essv7028379,essv7031845,essv7029279,essv7031324,essv7029990,essv7030956,essv7029346,essv7029501,essv7030257,essv7032056,essv7029335,essv7030313,essv7028335,essv7030179,essv7028113,essv7028590,essv7029979,essv7031067,essv7031246,essv7032067,essv7030512,essv7031868,essv7030912,essv7028623,essv7028324,essv7031178,essv7028823,essv7029080,essv7030612,essv7028346,essv7028424,essv7029901,essv7028313,essv7028879,essv7030012,essv7030623,essv7029068,essv7029091,essv7028646,essv7031112,essv7031401,essv7029890,essv7028956,essv7030490,essv7031446,essv7030268,essv7031090,essv7029546,essv7031413,essv7030501,essv7031101,essv7032123,essv7030045,essv7030324,essv7028435,essv7030524,essv7028812,essv7028901,essv7030335,essv7031568,essv7031023,essv7031579,essv7028501,essv7029923,essv7029568,essv7030690,essv7028135,essv7031213,essv7031535,essv7029202,essv7029113,essv7029845,essv7031468,essv7030845,essv7031546,essv7030568,essv7032012,essv7031134,essv7030146,essv7031501,essv7030712,essv7029779,essv7029146,essv7029590,essv7029734,essv7029479,essv7031079,essv7030979,essv7028746,essv7028579,essv7031524,essv7030657,essv7029646,essv7030768,essv7032034,essv7031701,essv7031191,essv7030023,essv7028213,essv7031679,essv7031623,essv7031668,essv7028568,essv7029668,essv7029302,essv7030091,essv7029512,essv7030635,essv7028191,essv7028146,essv7028368,essv7031601,essv7031612,essv7031557,essv7032045,essv7029723,essv7031657,essv7031034,essv7028168,essv7028712,essv7029401,essv7030590,essv7029601,essv7028923,essv7028657,essv7028068,essv7030001,essv7028701 M 1109 0 368 "" SW_0001,SW_0002,SW_0004,SW_0005,SW_0006,SW_0007,SW_0009,SW_0016,SW_0020,SW_0021,SW_0030,SW_0031,SW_0032,SW_0043,SW_0046,SW_0059,SW_0060,SW_0061,SW_0063,SW_0072,SW_0077,SW_0086,SW_0090,SW_0091,SW_0100,SW_0101,SW_0102,SW_0113,SW_0115,SW_0119,SW_0120,SW_0141,SW_0142,SW_0143,SW_0144,SW_0147,SW_0158,SW_0164,SW_0165,SW_0169,SW_0170,SW_0172,SW_0173,SW_0183,SW_0185,SW_0189,SW_0190,SW_0191,SW_0197,SW_0198,SW_0199,SW_0201,SW_0202,SW_0211,SW_0215,SW_0225,SW_0227,SW_0230,SW_0240,SW_0241,SW_0253,SW_0254,SW_0255,SW_0256,SW_0258,SW_0268,SW_0269,SW_0270,SW_0271,SW_0285,SW_0286,SW_0311,SW_0312,SW_0341,SW_0354,SW_0370,SW_0375,SW_0505,SW_0507,SW_0509,SW_0524,SW_0525,SW_0538,SW_0552,SW_0554,SW_0568,SW_0569,SW_0576,SW_0577,SW_0579,SW_0580,SW_0581,SW_0582,SW_0585,SW_0586,SW_0589,SW_0590,SW_0592,SW_0593,SW_0594,SW_0603,SW_0605,SW_0619,SW_0620,SW_0621,SW_0623,SW_0624,SW_0626,SW_0627,SW_0628,SW_0632,SW_0636,SW_0638,SW_0639,SW_0641,SW_0647,SW_0648,SW_0650,SW_0651,SW_0659,SW_0661,SW_0663,SW_0665,SW_0673,SW_0675,SW_0678,SW_0702,SW_0703,SW_0716,SW_0717,SW_0757,SW_0758,SW_0771,SW_0773,SW_0785,SW_0786,SW_0787,SW_0789,SW_0790,SW_0801,SW_0802,SW_0804,SW_0813,SW_0815,SW_0816,SW_0818,SW_0819,SW_0820,SW_0822,SW_0829,SW_0831,SW_0832,SW_0833,SW_0841,SW_0843,SW_0846,SW_0847,SW_0856,SW_0857,SW_0859,SW_0869,SW_0872,SW_0875,SW_0884,SW_0887,SW_0888,SW_0889,SW_0890,SW_0891,SW_1003,SW_1006,SW_1008,SW_1009,SW_1012,SW_1013,SW_1018,SW_1020,SW_1021,SW_1027,SW_1028,SW_1029,SW_1031,SW_1032,SW_1038,SW_1042,SW_1043,SW_1044,SW_1045,SW_1046,SW_1049,SW_1051,SW_1056,SW_1058,SW_1062,SW_1063,SW_1065,SW_1068,SW_1070,SW_1072,SW_1073,SW_1075,SW_1078,SW_1083,SW_1085,SW_1087,SW_1090,SW_1092,SW_1093,SW_1097,SW_1102,SW_1103,SW_1105,SW_1111,SW_1112,SW_1113,SW_1114,SW_1116,SW_1118,SW_1119,SW_1121,SW_1122,SW_1124,SW_1125,SW_1126,SW_1127,SW_1128,SW_1129,SW_1130,SW_1138,SW_1139,SW_1144,SW_1148,SW_1149,SW_1150,SW_1153,SW_1162,SW_1163,SW_1166,SW_1167,SW_1168,SW_1171,SW_1172,SW_1174,SW_1175,SW_1176,SW_1182,SW_1184,SW_1188,SW_1192,SW_1193,SW_1197,SW_1199,SW_1201,SW_1206,SW_1208,SW_1209,SW_1211,SW_1213,SW_1215,SW_1223,SW_1225,SW_1230,SW_1232,SW_1234,SW_1235,SW_1236,SW_1240,SW_1242,SW_1245,SW_1246,SW_1249,SW_1250,SW_1252,SW_1259,SW_1261,SW_1264,SW_1266,SW_1273,SW_1274,SW_1277,SW_1279,SW_1281,SW_1285,SW_1287,SW_1288,SW_1290,SW_1292,SW_1293,SW_1295,SW_1303,SW_1305,SW_1308,SW_1314,SW_1317,SW_1318,SW_1323,SW_1324,SW_1326,SW_1327,SW_1332,SW_1334,SW_1335,SW_1337,SW_1340,SW_1341,SW_1343,SW_1345,SW_1348,SW_1353,SW_1356,SW_1357,SW_1368,SW_1372,SW_1376,SW_1378,SW_1379,SW_1380,SW_1384,SW_1387,SW_1392,SW_1393,SW_1396,SW_1397,SW_1398,SW_1404,SW_1407,SW_1408,SW_1409,SW_1414,SW_1416,SW_1419,SW_1428,SW_1429,SW_1430,SW_1433,SW_1435,SW_1436,SW_1437,SW_1439,SW_1440,SW_1450,SW_1452,SW_1455,SW_1459,SW_1460,SW_1463,SW_1466,SW_1468,SW_1469,SW_1470,SW_1472,SW_1476,SW_1480,SW_1481,SW_1482,SW_1484,SW_1485,SW_1501,SW_1504,SW_1510,SW_1512,SW_1520,SW_1523,SW_1535,SW_1543,SW_1547,SW_1570,SW_1571 nsv830204 1 72522439 72711159 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447140 M 95 1 0 "" nsv546487 1 72523773 72535595 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716180 M 17421 0 1 "" nsv511137 1 72523773 72537704 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624821 M 1 0 1 "" 1 nsv947431 1 72526109 72582261 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765711,nssv2759415,nssv2765257,nssv2758365,nssv2761345,nssv2764550,nssv2763726,nssv2762991 M 97 0 8 "" HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01284,HGDP01307 esv1007188 1 72526539 72538645 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563729 M 3 0 1 "" HuRef nsv435635 1 72526998 72537535 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466017 M 2 0 1 "" NA15510 nsv511698 1 72527749 72536663 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626338 M 1 0 1 "" 1 esv33344 1 72527759 72536260 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98939,essv95831,essv95702,essv98257,essv98619,essv94221,essv95333,essv93632,essv94836,essv99981,essv94946,essv96169,essv101341,essv100290,essv92867,essv97530,essv98037,essv99539,essv95074,essv93101,essv93462,essv97186,essv94402,essv96979,essv97870,essv96756,essv101491,essv101618,essv99643,essv94014 M 51 29 1 "" 21603,21616,21659,21721,21772,21791,21802,21805,21808,21817,21837,21841,21863,21872,21909,21911,21938,21939,21972,22007,22075,22085,22086,22128,22217,22231,22259,22300,22335,22394 nsv10239 1 72527787 72537592 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16754,nssv15100,nssv16440,nssv13768,nssv12427 M 31 0 5 "" NA11830,NA12802,NA18517,NA19144,NA19221 esv24673 1 72527959 72536624 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16390 M 40 0 7 "" NA12156,NA15510,NA18508,NA18517,NA18523,NA19147,NA19190 dgv313n54 1 72528018 72532151 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546488,nsv546501 M 17421 0 2 "" dgv314n54 1 72528018 72534324 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546518,nsv546489,nsv546505,nsv546506 M 17421 0 12 "" dgv315n54 1 72528018 72536577 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546494,nsv546508,nsv546490,nsv546511,nsv546491,nsv546509,nsv546523,nsv546507,nsv546492,nsv546495,nsv546521,nsv546522,nsv546520,nsv546502,nsv546510,nsv546493,nsv546519 M 17421 0 304 "" dgv316n54 1 72528018 72555131 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546524,nsv546513,nsv546498,nsv546504,nsv546497,nsv546515,nsv546525,nsv546496,nsv546530,nsv546514,nsv546503 M 17421 0 23 "" dgv317n54 1 72528018 72568121 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546516,nsv546499,nsv546526 M 17421 0 3 "" dgv318n54 1 72528018 72584492 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546544,nsv546556,nsv546545,nsv546546,nsv546542,nsv546548,nsv546543,nsv546500,nsv546555,nsv546536,nsv546547,nsv546551,nsv546517,nsv546550,nsv546538,nsv546541,nsv546557,nsv546537,nsv546540 M 17421 203 0 "" nsv510891 1 72528173 72592186 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618632 M 4 0 0 "" CHM nsv823176 1 72528192 72536183 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434172 M 31 0 1 "" NA18570 nsv513989 1 72528416 72536288 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2860515,nssv2865213,nssv2864585,nssv2864503,nssv2866128,nssv2868135,nssv2858966,nssv2868101,nssv2866086,nssv2867801,nssv2861026,nssv2859126,nssv2861264,nssv2861960,nssv2859755,nssv2859427,nssv2863253,nssv2860878,nssv2867268,nssv2865449,nssv2864401,nssv2862389,nssv2865053,nssv2863629,nssv2858993,nssv2862003,nssv2866019,nssv2864422,nssv2864879,nssv2860800,nssv2866059,nssv2861041,nssv2865073,nssv2866411,nssv2865675,nssv2861537,nssv2861993,nssv2867039,nssv2863895,nssv2863608,nssv2864595,nssv2867739,nssv2860050,nssv2865450,nssv2867419,nssv2868338,nssv2863005,nssv2867760,nssv2864984,nssv2863416,nssv2864413,nssv2866657,nssv2864494,nssv2860544,nssv2861246,nssv2863350,nssv2859870,nssv2866473,nssv2860359,nssv2862210,nssv2865363,nssv2864386,nssv2868269,nssv2866776,nssv2859517,nssv2859312,nssv2866215,nssv2858512,nssv2868025,nssv2861713,nssv2858878,nssv2861217,nssv2862514,nssv2863727,nssv2860445,nssv2862515,nssv2864623,nssv2866791,nssv2858738,nssv2865334,nssv2859350,nssv2867726,nssv2860853,nssv2863480,nssv2860938,nssv2866690,nssv2866165,nssv2858551,nssv2865625,nssv2865299,nssv2866207,nssv2861570,nssv2868292,nssv2861054,nssv2859490,nssv2865086,nssv2863051,nssv2860962,nssv2865742,nssv2858972,nssv2868380,nssv2861565,nssv2867609,nssv2866859 M 2366 23 81 "" NA06991,NA06993,NA07000,NA07022,NA07347,NA10830,NA10835,NA10838,NA10843,NA10847,NA10850,NA10852,NA10856,NA11830,NA11832,NA11892,NA11893,NA11918,NA11920,NA12004,NA12005,NA12043,NA12045,NA12056,NA12058,NA12156,NA12236,NA12248,NA12273,NA12335,NA12341,NA12375,NA12383,NA12386,NA12399,NA12400,NA12414,NA12708,NA12718,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12767,NA12778,NA12802,NA12814,NA12815,NA12829,NA12842,NA12843,NA12873,NA12874,NA12891,NA12892,NA18508,NA18510,NA18516,NA18517,NA18522,NA18523,NA18524,NA18550,NA18570,NA18856,NA18861,NA18863,NA18868,NA18908,NA18947,NA19117,NA19123,NA19128,NA19138,NA19141,NA19144,NA19145,NA19147,NA19152,NA19160,NA19178,NA19190,NA19191,NA19193,NA19194,NA19197,NA19221,NA19222,NA19236,NA19239,NA19247,NA19248,NA19249,NA21365,NA21453,NA21455,NA21488,NA21513,NA21514,NA21524,NA21635,NA21686 esv2422096 1 72528637 72535958 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5156316,essv5025236,essv5007522,essv5041705,essv5063073,essv5137712,essv5017550,essv5156245,essv5055256,essv5113976,essv5038851,essv5033067,essv5076670,essv5096614,essv5023216,essv5048950,essv5101945,essv5095531,essv5103219,essv5067205,essv5006826,essv5038663,essv5044291,essv5037723,essv5063732,essv5107681,essv5128781,essv5069835,essv5012488,essv5071595,essv5010938,essv5134014,essv5143358,essv5098696,essv5016685,essv5030248,essv5135507,essv5080131,essv5004972,essv5070429,essv5156445,essv5110254,essv5028225,essv5097177,essv5053574,essv5121628,essv5141944,essv5080650,essv5120784,essv5071321,essv5102640,essv5017910,essv5030073,essv5059930,essv5004903,essv5043948,essv5088859,essv5037083,essv5007209,essv5159625,essv5037758,essv5109321,essv5092619,essv5128156,essv5060638,essv5088426,essv5051082,essv5045331,essv5059211,essv5024781,essv5081703,essv5002045,essv5090927,essv5068690,essv5084939,essv5108672,essv5137561,essv5032045,essv5140437,essv5048868,essv5083860,essv5069944,essv5007358,essv5057198,essv5113965,essv5144595,essv5042271,essv5102986,essv5058712,essv5150945,essv5058916,essv5070262,essv5014838,essv5141515,essv5156988,essv5136907,essv5094276,essv5064582,essv5153925,essv5102441,essv5017301,essv5053145,essv5110204,essv5002241,essv5075640,essv5009671,essv5154703,essv5074707,essv5059103,essv5025084,essv5056670,essv5051087,essv5095173,essv5017446,essv5120645,essv5013496,essv5084009,essv5120479,essv5142346,essv5072698,essv5154334,essv5159283,essv5080391,essv5127097,essv5096827,essv5138080,essv5079562,essv5021039,essv5016689,essv5114341,essv5056706,essv5053180,essv5054768,essv5139143,essv5010529,essv5097081,essv5144420,essv5093656,essv5013466,essv5045344,essv5121697,essv5113846,essv5109775,essv5055600,essv5042390,essv5010522,essv5043973,essv5005879,essv5137822,essv5061583,essv5005231,essv5112798,essv5082267,essv5024181,essv5094339,essv5046636,essv5120096,essv5111959,essv5019846,essv5076087,essv5082623,essv5104590,essv5011912,essv5004222,essv5020402 M 1184 0 165 "" NA06991,NA06993,NA07000,NA07022,NA07347,NA10830,NA10835,NA10843,NA10850,NA10852,NA10856,NA11830,NA11832,NA11918,NA11920,NA12043,NA12045,NA12156,NA12248,NA12273,NA12335,NA12341,NA12375,NA12383,NA12386,NA12399,NA12400,NA12413,NA12708,NA12718,NA12751,NA12752,NA12753,NA12760,NA12761,NA12762,NA12763,NA12767,NA12778,NA12802,NA12814,NA12815,NA12829,NA12842,NA12843,NA12873,NA12874,NA17966,NA18508,NA18510,NA18516,NA18517,NA18550,NA18570,NA18861,NA18863,NA18868,NA18912,NA19031,NA19036,NA19054,NA19059,NA19079,NA19117,NA19138,NA19139,NA19144,NA19147,NA19178,NA19190,NA19191,NA19193,NA19194,NA19203,NA19221,NA19222,NA19236,NA19247,NA19248,NA19249,NA19318,NA19334,NA19350,NA19360,NA19372,NA19376,NA19390,NA19625,NA19651,NA19653,NA19657,NA19659,NA19684,NA19708,NA19712,NA19760,NA19773,NA19779,NA19780,NA19781,NA19834,NA19836,NA19900,NA19982,NA20126,NA20276,NA20277,NA20279,NA20282,NA20288,NA20289,NA20290,NA20301,NA20319,NA20332,NA20502,NA20516,NA20517,NA20519,NA20520,NA20525,NA20527,NA20534,NA20541,NA20543,NA20757,NA20758,NA20761,NA20765,NA20774,NA20790,NA20792,NA20795,NA20797,NA20799,NA20803,NA20805,NA20807,NA20808,NA20809,NA20811,NA20816,NA20828,NA20853,NA20881,NA20882,NA20896,NA20898,NA20900,NA21097,NA21102,NA21106,NA21108,NA21116,NA21336,NA21364,NA21417,NA21453,NA21455,NA21513,NA21514,NA21517,NA21576,NA21577,NA21635 nsv546512 1 72528637 72537704 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716462 M 17421 0 1 "" dgv184n100 1 72528689 72591175 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999829,nsv1004213,nsv1006377,nsv1010739,nsv1001735,nsv1000421,nsv1000773,nsv1006759,nsv1010135,nsv1003345,nsv1013179,nsv1008107 M 29084 49 0 "" nsv442903 1 72528701 72535958 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617918,nssv1617897,nssv1617938,nssv1617934,nssv1617942,nssv1617911,nssv1617905,nssv1617925,nssv1617930,nssv1617931,nssv1617929,nssv1617917,nssv1617916,nssv1617909,nssv1617904,nssv1617923,nssv1617921,nssv1617922,nssv1617899,nssv1617945,nssv1617928,nssv1617941,nssv1617910,nssv1617940,nssv1617939,nssv1617933,nssv1617936,nssv1617908,nssv1617906,nssv1617915,nssv1617898,nssv1617943,nssv1617919,nssv1617912,nssv1617907,nssv1617914,nssv1617920,nssv1617944,nssv1617901,nssv1617937,nssv1617900,nssv1617903,nssv1617932,nssv1617926,nssv1617927 M 270 0 45 "" NA06991,NA06993,NA07000,NA07022,NA10830,NA10835,NA10856,NA11830,NA11832,NA12043,NA12156,NA12236,NA12248,NA12751,NA12752,NA12753,NA12760,NA12761,NA12762,NA12763,NA12802,NA12814,NA12815,NA12873,NA12874,NA18508,NA18516,NA18517,NA18521,NA18522,NA18523,NA18550,NA18570,NA18861,NA18863,NA18912,NA19138,NA19139,NA19144,NA19145,NA19193,NA19194,NA19203,NA19221,NA19222 dgv319n54 1 72529559 72536577 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546527,nsv546528,nsv546529 M 17421 0 6 "" dgv320n54 1 72531209 72536577 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546533,nsv546531,nsv546534 M 17421 0 4 "" nsv546532 1 72531209 72582030 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716536 M 17421 0 1 "" nsv1002234 1 72531788 72556524 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473283,nssv3464992 M 29084 2 0 "" dgv185n100 1 72532085 72585028 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003564,nsv1012497,nsv998371,nsv1009785,nsv999972,nsv998931,nsv999800,nsv1005090,nsv1008108,nsv1007640,nsv1011413,nsv1005170,nsv1005211,nsv998071,nsv1003099,nsv1005977,nsv1003699,nsv1003275,nsv1010149,nsv1006909,nsv1007090,nsv1010492,nsv1006651 M 29084 0 500 "" dgv186n100 1 72532085 72589597 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005581,nsv1011940,nsv1014678,nsv1004356,nsv1011000,nsv1004974,nsv998810,nsv1012858,nsv1011434,nsv1007261,nsv1011218,nsv1008678,nsv997915,nsv1005131,nsv997665,nsv997354,nsv1008865,nsv1004497 M 29084 1578 3408 "" nsv546535 1 72533769 72542017 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716539 M 17421 0 1 "" nsv508282 1 72535680 72592186 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622766 M 4 0 1 "" NA18994 dgv187n100 1 72535946 72583652 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000102,nsv1013635,nsv1009402,nsv1008874,nsv1004681,nsv1010455,nsv1005483,nsv1012181,nsv1005564 M 29084 54 0 "" dgv321n54 1 72536045 72568121 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546539,nsv546554 M 17421 2 0 "" nsv437222 1 72537704 72550161 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467103 M 60 0 1 "" NA19154 dgv4n17 1 72537704 72561278 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437220,nsv437225 M 60 0 2 "" NA19129,NA19202 dgv5n17 1 72537704 72585028 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437218,nsv437219,nsv437223,nsv437221,nsv437217 M 60 0 5 "" NA18500,NA18506,NA18515,NA19145,NA19161 esv2579314 1 72538330 72584647 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5275117 M 1 0 1 "" NA18507 esv995847 1 72538365 72584745 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565326 M 3 0 1 "" HuRef esv2480676 1 72538468 72585074 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5369149 M 1 0 1 "" NA18507 dgv2n16 1 72538468 72586954 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436617,nsv435862 M 2 0 2 "" NA15510,NA18505 esv9190 1 72538666 72584696 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31631 M 1 0 0 "" nsv546549 1 72538673 72571413 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv716683,nssv716685,nssv716684,nssv716686,nssv716687 M 17421 0 5 "" esv2422081 1 72538673 72583736 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5100524,essv5090082,essv5061560,essv5132380,essv5075552,essv5145881,essv5106624,essv5017094,essv5037151,essv5009195,essv5060657,essv5097118,essv5029493,essv5071566,essv5018584,essv5119974,essv5093886,essv5027426,essv5094138,essv5139068,essv5158141,essv5138369,essv5015474,essv5087693,essv5080995,essv5078401,essv5109861,essv5100180,essv5132632,essv5046027,essv5026961,essv5053318,essv5155268,essv5158196,essv5044427,essv5027832,essv5057590,essv5066940,essv5041436,essv5116029,essv5147852,essv5082812,essv5122167,essv5065936,essv5054571,essv5034051,essv5117429,essv5051805,essv5034680,essv5005712,essv5062892,essv5159816,essv5099921,essv5127268,essv5154240,essv5152924,essv5005754,essv5049477,essv5099043,essv5048288,essv5043399,essv5159797,essv5137010,essv5103853,essv5149301,essv5035265,essv5151394,essv5067136,essv5078499,essv5130529,essv5063759,essv5015451,essv5050834,essv5040427,essv5043622,essv5068260,essv5076274,essv5078662,essv5123037,essv5044299,essv5029090,essv5111500,essv5080376,essv5056170,essv5080181,essv5120945,essv5052456,essv5105516,essv5034831,essv5101013,essv5157753,essv5160921,essv5154643,essv5148558,essv5104452,essv5074531,essv5045970,essv5101028,essv5035163,essv5150802,essv5041312,essv5025370,essv5003170,essv5015174,essv5072586,essv5109227,essv5077051,essv5030183,essv5003225,essv5114113,essv5129021,essv5103869,essv5119644,essv5071197,essv5095348,essv5053037,essv5122086,essv5074857,essv5078888,essv5063431,essv5038113,essv5068456,essv5066537,essv5133609,essv5037280,essv5133595,essv5134187,essv5158254,essv5095857,essv5054251,essv5126050,essv5119482,essv5034659,essv5092155,essv5060757,essv5054404,essv5072306,essv5138997,essv5022387,essv5063908,essv5040181,essv5059431,essv5149586,essv5144281,essv5066231,essv5121921,essv5012293,essv5018801,essv5126356,essv5123336,essv5013886,essv5050946,essv5076459,essv5073512,essv5140897,essv5047246,essv5051408,essv5132398,essv5035662,essv5055087,essv5002732,essv5010867,essv5152487,essv5040240,essv5077298,essv5037826,essv5151291,essv5113107,essv5136875,essv5067477,essv5085806,essv5066131,essv5108944,essv5101548,essv5050336,essv5018626,essv5126658,essv5155151,essv5153372,essv5128480,essv5034596,essv5024975,essv5127179,essv5142241,essv5106946,essv5027298,essv5144509,essv5006960,essv5099444,essv5022624,essv5118143,essv5090998,essv5138964,essv5025383,essv5098833,essv5004433,essv5033661,essv5062142,essv5156836,essv5079652,essv5123330,essv5029237,essv5060088,essv5107761,essv5018673,essv5048098,essv5156706,essv5134689,essv5047908,essv5100230,essv5076328,essv5005075,essv5098482,essv5094753,essv5133471,essv5133854,essv5072384,essv5073346,essv5071744,essv5090812,essv5090380,essv5058462,essv5013221,essv5012722,essv5071031,essv5075792,essv5081613,essv5154729,essv5052365,essv5082969,essv5139797,essv5016988,essv5015973,essv5020586,essv5046401,essv5096180,essv5069327,essv5094084,essv5129644,essv5158049,essv5131597,essv5017619,essv5095559,essv5097297,essv5148706,essv5085511,essv5070503,essv5049997,essv5005276,essv5027772,essv5139170,essv5154261,essv5015056,essv5127386,essv5133257,essv5147904,essv5003991,essv5109291,essv5083951,essv5112094,essv5024203,essv5148207,essv5158347,essv5144266,essv5021095,essv5067918,essv5026097,essv5092186,essv5076784,essv5070628,essv5032690,essv5105903,essv5086070,essv5004430,essv5132600,essv5116920,essv5160300,essv5018239,essv5141444,essv5010627,essv5101193,essv5139097,essv5120064,essv5126346,essv5146286,essv5157998,essv5017187,essv5027837,essv5003739,essv5030700,essv5140876,essv5069549,essv5106837,essv5137243,essv5151459,essv5082385,essv5103027,essv5149476,essv5150496,essv5105439,essv5106059,essv5086151,essv5091541,essv5111135,essv5072404,essv5049846,essv5156415,essv5019192,essv5045902,essv5044685,essv5007399,essv5042647,essv5098863,essv5040734,essv5138783,essv5159448,essv5102470,essv5077916,essv5140041,essv5024097,essv5038297,essv5125189,essv5016017,essv5006325,essv5031315,essv5111489,essv5127668,essv5005080,essv5003200,essv5022049,essv5140677,essv5114652,essv5126421,essv5009535,essv5112904,essv5039551,essv5156558,essv5116981,essv5159877,essv5002792,essv5036695,essv5048302,essv5003631,essv5081652,essv5012930,essv5022566,essv5048813,essv5109487,essv5090648,essv5058341,essv5005070,essv5145993,essv5133869,essv5134654,essv5109310,essv5133558,essv5104363,essv5135471,essv5065149,essv5084682,essv5107820,essv5146324,essv5084436,essv5141453,essv5013726,essv5006118,essv5104140,essv5067032,essv5141881,essv5104196,essv5122294,essv5080205,essv5127889,essv5129976,essv5080551,essv5004487,essv5005428,essv5067591,essv5012577,essv5089786,essv5078508,essv5100784,essv5014044,essv5064905,essv5096414,essv5019963,essv5147987,essv5107859,essv5011961,essv5062963,essv5121897,essv5069306,essv5099653,essv5110537,essv5134507,essv5021136,essv5091989,essv5138392,essv5025287,essv5143166,essv5149865,essv5106721,essv5040450,essv5043238,essv5021490,essv5071534,essv5074445,essv5009934,essv5039947,essv5027044,essv5159360,essv5002315,essv5026287,essv5087360,essv5133454,essv5112185,essv5056757,essv5085244,essv5109057,essv5099598,essv5110982,essv5142002,essv5122823,essv5098939,essv5114154,essv5087528,essv5008263,essv5060917,essv5056185,essv5039051,essv5105686,essv5021195,essv5100833,essv5040379,essv5032518,essv5070882,essv5155939,essv5071558,essv5069957,essv5143966,essv5070103,essv5034920,essv5138536,essv5136877,essv5075724,essv5088126,essv5028184,essv5158983,essv5095412,essv5098845,essv5062928,essv5093868,essv5154692,essv5033995,essv5157103,essv5094010,essv5099687,essv5148486,essv5005784,essv5016207,essv5141192,essv5109143,essv5061241,essv5160748,essv5141582,essv5139686,essv5154189,essv5142315,essv5154244,essv5089782,essv5031145,essv5130940,essv5024489,essv5012969,essv5039658,essv5112675,essv5048581,essv5119316,essv5117057,essv5084714,essv5021528,essv5121481,essv5015352,essv5078960,essv5004869,essv5055659,essv5019622,essv5123814,essv5013323,essv5048564,essv5031149,essv5125655,essv5119431,essv5107910,essv5103310,essv5008494,essv5066568,essv5155868,essv5118804,essv5142292,essv5071762,essv5143230,essv5126743,essv5115766,essv5078387,essv5084369,essv5114775,essv5089366,essv5086063,essv5030674,essv5064477,essv5151153,essv5053326,essv5122624,essv5037990,essv5139728,essv5005824,essv5024956,essv5013784,essv5024785,essv5099037,essv5076300,essv5049288,essv5126312,essv5144579,essv5111236,essv5042442,essv5047848,essv5135561,essv5038227,essv5148977,essv5025135,essv5002408,essv5110997,essv5043560,essv5039796,essv5081662,essv5121362,essv5090589,essv5075286,essv5110879,essv5026982,essv5077759,essv5042427,essv5129511,essv5112496,essv5088043,essv5096816,essv5119442,essv5134279,essv5028032,essv5160473,essv5058563,essv5123430,essv5122531,essv5155093,essv5002005,essv5037314,essv5098814,essv5084001,essv5072267,essv5096262,essv5020439,essv5058449,essv5097397,essv5084629,essv5158778,essv5135562,essv5016969,essv5149907,essv5133705,essv5126156,essv5042319,essv5152150,essv5153936,essv5025402,essv5072810,essv5071416,essv5145602,essv5095722,essv5159781,essv5108841,essv5022849,essv5053563,essv5008311,essv5138981,essv5064765,essv5088341,essv5052779,essv5018266,essv5105121,essv5140130,essv5027985,essv5012904,essv5130993,essv5012345,essv5105525,essv5065540,essv5048690,essv5142867,essv5052700,essv5025961,essv5078334,essv5047228,essv5153390,essv5011988,essv5120282,essv5043141,essv5043562,essv5065756,essv5100124,essv5048638,essv5112551,essv5095362,essv5041461,essv5060260,essv5048540,essv5113145,essv5008659,essv5009232,essv5082319,essv5054905,essv5009691,essv5084419,essv5018460,essv5150508,essv5098118,essv5145019,essv5085593,essv5039859,essv5002527,essv5039041,essv5150005,essv5057021,essv5125108,essv5016601,essv5094508,essv5148736,essv5100984,essv5029568,essv5008351,essv5113341,essv5030187,essv5142363,essv5099557,essv5061918,essv5108165,essv5094998,essv5095001,essv5064239,essv5077904,essv5127266,essv5067853,essv5031519,essv5097484,essv5028394,essv5040827,essv5022346,essv5075996,essv5021834,essv5127505,essv5081424,essv5132871,essv5013128,essv5033854,essv5048012,essv5020733,essv5006425,essv5004654,essv5058600,essv5055479,essv5016656,essv5011863,essv5042745,essv5155840,essv5041428,essv5053621,essv5140720,essv5128947,essv5046410,essv5139110,essv5104806,essv5142206,essv5037142,essv5050436,essv5050297,essv5006495,essv5134069,essv5095138,essv5041746,essv5026943,essv5136258,essv5034923,essv5031962,essv5093618,essv5095871,essv5150229,essv5039291,essv5100140,essv5090361,essv5024191,essv5058429,essv5157725,essv5137601,essv5148744,essv5014466,essv5083696,essv5003655,essv5132853,essv5071463,essv5090457,essv5006610,essv5038613,essv5153129,essv5116790,essv5051680,essv5153741,essv5124692,essv5154332,essv5029086,essv5133717,essv5029955,essv5116248,essv5035162,essv5109141,essv5144117,essv5126400,essv5148354,essv5087614,essv5035831,essv5044750,essv5063629,essv5095736,essv5088446,essv5040467,essv5142379,essv5084202,essv5160902,essv5104636,essv5138519,essv5082102,essv5018714,essv5010997,essv5079549,essv5021475,essv5037773,essv5063422,essv5149079,essv5087726,essv5079283,essv5135225,essv5142144,essv5102581,essv5103640,essv5136058,essv5125545,essv5072528,essv5109477,essv5063904,essv5054451,essv5103915,essv5078167,essv5004122,essv5156093,essv5098993,essv5024494,essv5025333,essv5011723,essv5133030,essv5067016,essv5092947,essv5043244,essv5080860,essv5073162,essv5056807,essv5079579,essv5065269,essv5146513,essv5056567,essv5031090,essv5051241,essv5046021,essv5083367,essv5155769,essv5107308,essv5065974,essv5032317,essv5103923,essv5033494,essv5095945,essv5036546,essv5078006,essv5021525,essv5055861,essv5020596,essv5158094,essv5006846,essv5147178,essv5073322,essv5159395,essv5060703,essv5148361,essv5133189,essv5092136,essv5111221,essv5010270,essv5025397,essv5053582,essv5106003,essv5081511,essv5143764,essv5014826,essv5058893,essv5091056,essv5054653,essv5083187,essv5113499,essv5147391,essv5041636,essv5009918,essv5090634,essv5003336,essv5130192,essv5070538,essv5127577,essv5118613,essv5160627,essv5134588,essv5149307,essv5130689,essv5058617,essv5027897,essv5018305,essv5092939,essv5117371,essv5057686,essv5117440,essv5128014,essv5148106,essv5043432,essv5041226,essv5003070,essv5095307,essv5105148,essv5145252,essv5081300,essv5078276,essv5035490,essv5010334,essv5154796,essv5146767,essv5054352,essv5111597,essv5046965,essv5100178,essv5152860,essv5064810,essv5008581,essv5067210,essv5052692,essv5024388,essv5089174,essv5132268,essv5141254,essv5069603,essv5011067,essv5113246,essv5122821,essv5085095,essv5150881,essv5153750,essv5010454,essv5051038,essv5019807,essv5136500,essv5006368,essv5083964,essv5116879,essv5046064,essv5088038,essv5157667,essv5143474,essv5115235,essv5053074,essv5064859,essv5022633,essv5065981,essv5159098,essv5116281,essv5024948,essv5119651,essv5004263,essv5082936,essv5074558,essv5036251,essv5096181,essv5054731,essv5149320,essv5137348,essv5004934,essv5066290,essv5118367,essv5065841,essv5084362,essv5131319,essv5055794,essv5142177,essv5059066,essv5064121,essv5023150,essv5026463,essv5138606,essv5106552,essv5072849,essv5060817,essv5060655,essv5101025,essv5058147,essv5097383,essv5089779,essv5077366,essv5048661,essv5106919,essv5102526,essv5016511,essv5098650,essv5045850,essv5084852,essv5143561,essv5148124,essv5045252,essv5094966,essv5113044,essv5087701,essv5138530,essv5145554,essv5034644,essv5042870,essv5059658,essv5139899,essv5094118,essv5118451,essv5084021,essv5089081,essv5076881,essv5074155,essv5098810,essv5134768,essv5078458,essv5042199,essv5016695,essv5035161,essv5025259,essv5160621,essv5160136,essv5105319,essv5016648,essv5110193,essv5145337,essv5024548,essv5107385,essv5070930,essv5062878,essv5136992,essv5148000,essv5158831,essv5080660,essv5060946,essv5033741,essv5105714,essv5105844,essv5119841,essv5080260,essv5002203,essv5147674,essv5102051,essv5032367,essv5048530,essv5157065,essv5061000,essv5016966,essv5088436,essv5079929,essv5030694,essv5031418,essv5084219,essv5144316,essv5047168,essv5059194,essv5145970,essv5061208,essv5012419,essv5097805,essv5105307,essv5041545,essv5144341,essv5089626,essv5149815,essv5151410,essv5044195,essv5066016,essv5109509,essv5072865,essv5098662,essv5112690,essv5153379,essv5046306,essv5104195,essv5089054,essv5058572,essv5137249,essv5160536,essv5141167,essv5157037,essv5018672,essv5020023,essv5025651,essv5112997,essv5088245,essv5051503,essv5117838,essv5019824,essv5145504,essv5124628,essv5044293,essv5130013,essv5136268 M 1184 0 1027 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07022,NA07029,NA07031,NA07037,NA07045,NA07051,NA07055,NA07056,NA07345,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10836,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10852,NA10853,NA10855,NA10856,NA10859,NA10861,NA10863,NA10864,NA10865,NA11829,NA11830,NA11831,NA11832,NA11840,NA11843,NA11881,NA11882,NA11891,NA11892,NA11893,NA11894,NA11917,NA11919,NA11930,NA11931,NA11992,NA11993,NA11994,NA11995,NA12003,NA12005,NA12006,NA12043,NA12044,NA12045,NA12057,NA12144,NA12145,NA12146,NA12154,NA12155,NA12234,NA12239,NA12249,NA12264,NA12272,NA12275,NA12282,NA12283,NA12286,NA12287,NA12336,NA12340,NA12342,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12413,NA12489,NA12546,NA12707,NA12708,NA12716,NA12718,NA12739,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12761,NA12762,NA12763,NA12766,NA12767,NA12775,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12865,NA12872,NA12873,NA12874,NA12878,NA12891,NA12892,NA17962,NA17965,NA17966,NA17967,NA17968,NA17969,NA17970,NA17972,NA17974,NA17975,NA17976,NA17977,NA17979,NA17980,NA17981,NA17982,NA17983,NA17986,NA17987,NA17988,NA17989,NA17990,NA17993,NA17995,NA17996,NA17997,NA17998,NA17999,NA18101,NA18102,NA18105,NA18106,NA18107,NA18108,NA18109,NA18112,NA18114,NA18117,NA18118,NA18120,NA18122,NA18124,NA18125,NA18127,NA18128,NA18129,NA18131,NA18132,NA18133,NA18134,NA18135,NA18136,NA18138,NA18139,NA18140,NA18141,NA18143,NA18144,NA18146,NA18147,NA18148,NA18149,NA18150,NA18151,NA18152,NA18153,NA18154,NA18155,NA18156,NA18157,NA18158,NA18159,NA18160,NA18161,NA18162,NA18166,NA18484,NA18485,NA18487,NA18488,NA18489,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18510,NA18511,NA18515,NA18516,NA18518,NA18519,NA18520,NA18524,NA18526,NA18529,NA18532,NA18534,NA18536,NA18537,NA18542,NA18543,NA18544,NA18545,NA18546,NA18548,NA18550,NA18552,NA18555,NA18557,NA18558,NA18559,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18605,NA18608,NA18609,NA18610,NA18611,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18621,NA18622,NA18623,NA18624,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18639,NA18640,NA18641,NA18642,NA18643,NA18645,NA18647,NA18670,NA18674,NA18682,NA18685,NA18689,NA18694,NA18696,NA18702,NA18704,NA18740,NA18745,NA18747,NA18748,NA18749,NA18757,NA18852,NA18855,NA18857,NA18858,NA18859,NA18860,NA18861,NA18862,NA18867,NA18868,NA18869,NA18870,NA18872,NA18873,NA18874,NA18875,NA18909,NA18910,NA18911,NA18912,NA18913,NA18914,NA18917,NA18923,NA18925,NA18930,NA18934,NA18935,NA18939,NA18940,NA18942,NA18943,NA18944,NA18945,NA18946,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18954,NA18955,NA18956,NA18957,NA18959,NA18960,NA18961,NA18962,NA18963,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18978,NA18979,NA18980,NA18981,NA18987,NA18990,NA18993,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19001,NA19002,NA19005,NA19007,NA19009,NA19010,NA19027,NA19028,NA19031,NA19035,NA19036,NA19038,NA19041,NA19044,NA19046,NA19054,NA19055,NA19056,NA19057,NA19058,NA19059,NA19060,NA19062,NA19063,NA19064,NA19065,NA19066,NA19067,NA19068,NA19070,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19083,NA19084,NA19085,NA19086,NA19087,NA19088,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19101,NA19102,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19117,NA19119,NA19121,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19137,NA19139,NA19141,NA19143,NA19146,NA19147,NA19148,NA19150,NA19152,NA19153,NA19154,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19176,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19192,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19223,NA19224,NA19225,NA19226,NA19235,NA19237,NA19238,NA19247,NA19248,NA19249,NA19256,NA19258,NA19307,NA19309,NA19310,NA19311,NA19313,NA19315,NA19316,NA19317,NA19318,NA19321,NA19324,NA19327,NA19328,NA19332,NA19334,NA19346,NA19347,NA19359,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19391,NA19393,NA19394,NA19396,NA19397,NA19403,NA19404,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19439,NA19443,NA19444,NA19446,NA19448,NA19449,NA19455,NA19456,NA19462,NA19467,NA19468,NA19469,NA19471,NA19472,NA19473,NA19649,NA19650,NA19651,NA19652,NA19653,NA19654,NA19656,NA19657,NA19658,NA19660,NA19661,NA19662,NA19663,NA19664,NA19665,NA19669,NA19670,NA19671,NA19675,NA19676,NA19677,NA19678,NA19679,NA19680,NA19681,NA19682,NA19683,NA19685,NA19700,NA19702,NA19703,NA19704,NA19705,NA19708,NA19711,NA19712,NA19713,NA19714,NA19716,NA19718,NA19720,NA19721,NA19722,NA19723,NA19724,NA19725,NA19726,NA19727,NA19746,NA19747,NA19748,NA19749,NA19750,NA19751,NA19755,NA19756,NA19757,NA19759,NA19760,NA19761,NA19762,NA19763,NA19770,NA19771,NA19772,NA19774,NA19776,NA19777,NA19778,NA19782,NA19783,NA19784,NA19788,NA19789,NA19790,NA19794,NA19795,NA19796,NA19818,NA19819,NA19828,NA19834,NA19835,NA19836,NA19901,NA19902,NA19904,NA19908,NA19914,NA19915,NA19916,NA19917,NA19918,NA19919,NA19921,NA19983,NA19985,NA20126,NA20127,NA20128,NA20129,NA20276,NA20279,NA20281,NA20282,NA20284,NA20287,NA20288,NA20291,NA20292,NA20294,NA20295,NA20297,NA20300,NA20301,NA20302,NA20322,NA20333,NA20334,NA20336,NA20337,NA20342,NA20343,NA20344,NA20345,NA20347,NA20348,NA20349,NA20350,NA20356,NA20357,NA20358,NA20359,NA20360,NA20363,NA20364,NA20502,NA20504,NA20505,NA20506,NA20508,NA20510,NA20512,NA20515,NA20517,NA20518,NA20519,NA20520,NA20521,NA20522,NA20524,NA20525,NA20527,NA20528,NA20529,NA20530,NA20531,NA20535,NA20538,NA20539,NA20540,NA20541,NA20542,NA20544,NA20581,NA20582,NA20586,NA20588,NA20589,NA20752,NA20753,NA20754,NA20756,NA20759,NA20760,NA20765,NA20766,NA20768,NA20769,NA20770,NA20771,NA20772,NA20773,NA20774,NA20775,NA20783,NA20785,NA20786,NA20787,NA20790,NA20795,NA20796,NA20797,NA20799,NA20800,NA20802,NA20803,NA20804,NA20806,NA20807,NA20809,NA20810,NA20811,NA20812,NA20813,NA20815,NA20818,NA20819,NA20826,NA20828,NA20846,NA20847,NA20849,NA20850,NA20852,NA20853,NA20854,NA20856,NA20858,NA20859,NA20861,NA20869,NA20870,NA20871,NA20873,NA20874,NA20875,NA20876,NA20877,NA20882,NA20883,NA20884,NA20885,NA20887,NA20888,NA20889,NA20890,NA20891,NA20892,NA20895,NA20897,NA20898,NA20899,NA20900,NA20901,NA20902,NA20903,NA20904,NA20906,NA20907,NA20909,NA20910,NA20911,NA21086,NA21088,NA21089,NA21090,NA21091,NA21092,NA21094,NA21097,NA21098,NA21099,NA21100,NA21101,NA21102,NA21103,NA21104,NA21105,NA21107,NA21108,NA21109,NA21111,NA21112,NA21113,NA21115,NA21117,NA21118,NA21119,NA21123,NA21125,NA21142,NA21143,NA21144,NA21297,NA21300,NA21302,NA21303,NA21308,NA21309,NA21311,NA21312,NA21313,NA21314,NA21316,NA21317,NA21318,NA21320,NA21333,NA21336,NA21339,NA21344,NA21352,NA21353,NA21355,NA21356,NA21357,NA21359,NA21360,NA21361,NA21362,NA21363,NA21364,NA21365,NA21366,NA21367,NA21368,NA21370,NA21371,NA21378,NA21379,NA21381,NA21382,NA21383,NA21384,NA21385,NA21387,NA21389,NA21390,NA21391,NA21399,NA21401,NA21402,NA21403,NA21404,NA21408,NA21414,NA21415,NA21417,NA21418,NA21420,NA21421,NA21423,NA21424,NA21425,NA21435,NA21436,NA21440,NA21441,NA21442,NA21447,NA21448,NA21451,NA21453,NA21454,NA21455,NA21457,NA21473,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21491,NA21493,NA21494,NA21509,NA21510,NA21513,NA21517,NA21519,NA21520,NA21521,NA21522,NA21523,NA21524,NA21525,NA21526,NA21527,NA21528,NA21529,NA21574,NA21575,NA21576,NA21578,NA21582,NA21583,NA21587,NA21596,NA21597,NA21599,NA21600,NA21601,NA21608,NA21611,NA21613,NA21614,NA21615,NA21616,NA21617,NA21619,NA21632,NA21635,NA21636,NA21648,NA21650,NA21678,NA21682,NA21683,NA21685,NA21686,NA21689,NA21716,NA21717,NA21718,NA21719,NA21722,NA21723,NA21733,NA21738,NA21739,NA21740,NA21768,NA21776,NA21825,NA21826 nsv945997 1 72538687 72545951 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772242,nssv1772223,nssv1772246,nssv1772237,nssv1772168,nssv1772198,nssv1772184,nssv1772252,nssv1772175,nssv1772206,nssv1772169,nssv1772231,nssv1772182,nssv1772249,nssv1772244,nssv1772162,nssv1772247,nssv1772256,nssv1772180,nssv1772210,nssv1772186,nssv1772233,nssv1772177,nssv1772200,nssv1772183,nssv1772207,nssv1772163,nssv1772234,nssv1772248,nssv1772253,nssv1772170,nssv1772228,nssv1772190,nssv1772226,nssv1772165,nssv1772255,nssv1772239,nssv1772227,nssv1772164,nssv1772238,nssv1772241,nssv1772201,nssv1772171,nssv1772258,nssv1772245,nssv1772232,nssv1772240,nssv1772254,nssv1772172,nssv1772208,nssv1772243,nssv1772251,nssv1772181,nssv1772219,nssv1772193,nssv1772204,nssv1772166,nssv1772229,nssv1772176,nssv1772209,nssv1772167,nssv1772195,nssv1772179,nssv1772218,nssv1772174,nssv1772213,nssv1772173,nssv1772194,nssv1772178,nssv1772217,nssv1772191,nssv1772216,nssv1772211,nssv1772235,nssv1772199,nssv1772225,nssv1772197,nssv1772205,nssv1772188,nssv1772196,nssv1772214,nssv1772230,nssv1772220,nssv1772257,nssv1772192,nssv1772202,nssv1772203,nssv1772189,nssv1772187,nssv1772212,nssv1772215,nssv1772185,nssv1772221,nssv1772222,nssv1772250,nssv1772224,nssv1772236 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv10250 1 72538707 72585267 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv14733,nssv14431,nssv20093,nssv18064,nssv17099,nssv17084,nssv15109,nssv14406,nssv14420,nssv17088,nssv14072,nssv13102,nssv14098,nssv14409,nssv15441,nssv15432,nssv14746,nssv12445,nssv14078,nssv15107,nssv13766,nssv12777,nssv13091,nssv12095 M 31 6 18 "" NA07029,NA07048,NA10839,NA10847,NA10863,NA12155,NA12740,NA12872,NA18502,NA18517,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18980,NA19007,NA19132,NA19144,NA19173,NA19240 nsv819206 1 72538803 72584603 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418741 M 2 0 1 "" AK1 dgv51n67 1 72538815 72584689 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823198,nsv823187,nsv823209 M 31 0 30 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv821382 1 72538815 72584689 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420391 M 1 0 1 "" NA10851 esv4289 1 72538850 72584609 CNV loss Wang_et_al_2008 18987735 Sequencing essv26730 M 1 0 1 "" YH esv24502 1 72538870 72584557 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15735 M 40 9 19 "" NA06985,NA07037,NA11931,NA11993,NA11995,NA12004,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18502,NA18517,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19190,NA19240,NA19257 nsv511699 1 72538880 72584444 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626339 M 1 0 1 "" 1 nsv498672 1 72538912 72584429 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585384 M 9 0 1 "" esv33765 1 72539082 72584229 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93119,essv93455,essv94060,essv97044,essv98631,essv93637,essv92860,essv95899,essv96793,essv99978,essv94680,essv94652,essv93164,essv98320,essv98050,essv94191,essv98369,essv97063,essv94053,essv95122,essv99564,essv95669,essv93716,essv95155,essv101502,essv101418,essv100007,essv95308,essv95805,essv92926,essv99457,essv98333,essv96976,essv99057,essv98982,essv101311,essv96205,essv94950,essv93973,essv99921,essv92949,essv97814,essv101535,essv101386,essv99086,essv92866,essv96863,essv93990,essv95735,essv94914,essv98034,essv101620,essv96231,essv99317,essv98533,essv101642,essv92699,essv97906,essv95578,essv98989,essv95162,essv101421,essv99973,essv95163,essv97459,essv96805,essv95339,essv93785,essv93683,essv98332,essv97048 M 51 4 25 "" 21603,21616,21659,21721,21772,21791,21802,21805,21817,21837,21841,21863,21872,21909,21911,21938,21939,21944,21972,22007,22085,22086,22128,22231,22259,22275,22335,22352,22394 nsv513990 1 72539216 72583480 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2867828,nssv2862535,nssv2859733,nssv2860923,nssv2859967,nssv2867302,nssv2863481,nssv2860143,nssv2859990,nssv2864929,nssv2864198,nssv2863767,nssv2859325,nssv2866558,nssv2861579,nssv2860556,nssv2863634,nssv2861754,nssv2860021,nssv2864504,nssv2860624,nssv2867175,nssv2867484,nssv2862037,nssv2864127,nssv2859529,nssv2863892,nssv2860439,nssv2866865,nssv2866452,nssv2868371,nssv2860697,nssv2860495,nssv2864372,nssv2862646,nssv2858934,nssv2864804,nssv2859807,nssv2868201,nssv2863527,nssv2863420,nssv2863201,nssv2862924,nssv2858683,nssv2860730,nssv2862855,nssv2859597,nssv2861559,nssv2862256,nssv2863174,nssv2862697,nssv2865573,nssv2863439,nssv2865261,nssv2868225,nssv2863433,nssv2867209,nssv2866771,nssv2864043,nssv2860801,nssv2861678,nssv2865152,nssv2864291,nssv2863733,nssv2859566,nssv2866568,nssv2865097,nssv2860579,nssv2863665,nssv2865980,nssv2868249,nssv2866050,nssv2867692,nssv2866496,nssv2864692,nssv2859138,nssv2865837,nssv2861465,nssv2862804,nssv2860449,nssv2860238,nssv2859866,nssv2858854,nssv2867401,nssv2863119,nssv2862711,nssv2866900,nssv2867376,nssv2861799,nssv2859565,nssv2861755,nssv2866025,nssv2859228,nssv2862519,nssv2864786,nssv2867935,nssv2858888,nssv2858641,nssv2864888,nssv2865482,nssv2861652,nssv2862558,nssv2859965,nssv2865593,nssv2866699,nssv2859606,nssv2866926,nssv2867577,nssv2865134,nssv2864114,nssv2865743,nssv2860057,nssv2864141,nssv2860541,nssv2859109,nssv2860100,nssv2866017,nssv2867704,nssv2859512,nssv2867154,nssv2861042,nssv2860099,nssv2861610,nssv2863797,nssv2867791,nssv2865220,nssv2862802,nssv2861218,nssv2865024,nssv2866792,nssv2860458,nssv2861371,nssv2858553,nssv2867432,nssv2860996,nssv2863545,nssv2866665,nssv2866087,nssv2865802,nssv2866677,nssv2866567,nssv2866750,nssv2861898,nssv2860797,nssv2860752,nssv2865234,nssv2866190,nssv2861454,nssv2861195,nssv2861664,nssv2861296,nssv2861060,nssv2864982,nssv2858679,nssv2859491,nssv2861505,nssv2866715,nssv2859674,nssv2861021,nssv2867558,nssv2860826,nssv2864194,nssv2867796,nssv2867063,nssv2865639,nssv2862961,nssv2859245,nssv2861386,nssv2862965,nssv2866877,nssv2865793,nssv2863522,nssv2859199,nssv2859528,nssv2867459,nssv2863002,nssv2865265,nssv2864766,nssv2863036,nssv2868030,nssv2868204,nssv2860528,nssv2861498,nssv2862060,nssv2863440,nssv2867601,nssv2858542,nssv2864381,nssv2862816,nssv2860948,nssv2862390,nssv2861987,nssv2868026,nssv2859425,nssv2860081,nssv2865324,nssv2864362,nssv2861043,nssv2866901,nssv2864113,nssv2864689,nssv2860235,nssv2863006,nssv2865235,nssv2864105,nssv2866922,nssv2859809,nssv2860037,nssv2865407,nssv2859408,nssv2862702,nssv2866407,nssv2863417,nssv2867228,nssv2859911,nssv2866700,nssv2867512,nssv2864724,nssv2863580,nssv2867706,nssv2864402,nssv2867089,nssv2863392,nssv2863423,nssv2862101,nssv2859594,nssv2863249,nssv2859481,nssv2867096,nssv2861171,nssv2866685,nssv2864446,nssv2867655,nssv2863528,nssv2865640,nssv2861800,nssv2862831,nssv2867357,nssv2861866,nssv2868335,nssv2868004,nssv2861435,nssv2866191,nssv2864654,nssv2862355,nssv2866944,nssv2860839,nssv2866627,nssv2864373,nssv2861626,nssv2866976,nssv2858524,nssv2861694,nssv2860939,nssv2861816,nssv2865117,nssv2866355,nssv2866412,nssv2859278,nssv2864397,nssv2865492,nssv2861284,nssv2862475,nssv2863086,nssv2866647,nssv2860899,nssv2868283,nssv2860540,nssv2859991,nssv2864520,nssv2867984,nssv2861526,nssv2863182,nssv2867101,nssv2867559,nssv2859715,nssv2860555,nssv2866184,nssv2861788,nssv2863644,nssv2863373,nssv2863383,nssv2862832,nssv2865895,nssv2865446,nssv2867911,nssv2860170,nssv2867693,nssv2864015,nssv2862310,nssv2867764,nssv2862833,nssv2867652,nssv2862769,nssv2867881,nssv2866077,nssv2858751,nssv2862406,nssv2863593,nssv2859774,nssv2863699,nssv2867662,nssv2861392,nssv2858994,nssv2861554,nssv2868114,nssv2865022,nssv2866072,nssv2862252,nssv2864963,nssv2861450,nssv2861680,nssv2861961,nssv2861464,nssv2860671,nssv2864147,nssv2865856,nssv2866351,nssv2858977,nssv2860412,nssv2859455,nssv2866904,nssv2865597,nssv2864247,nssv2862181,nssv2863499,nssv2863274,nssv2859264,nssv2862397,nssv2865887,nssv2860701,nssv2862474,nssv2864470,nssv2864803,nssv2860126,nssv2865065,nssv2862233,nssv2858742,nssv2865768,nssv2859437,nssv2860227,nssv2866108,nssv2863945,nssv2862265,nssv2864073,nssv2862563,nssv2863284,nssv2861207,nssv2866937,nssv2858651,nssv2866543,nssv2865930,nssv2859028,nssv2868098,nssv2859976,nssv2862760,nssv2860324,nssv2862297,nssv2866136,nssv2864834,nssv2858745,nssv2864962,nssv2864102,nssv2859984,nssv2861865,nssv2867532,nssv2865546,nssv2861870,nssv2858887,nssv2862736,nssv2866849,nssv2859269,nssv2860348,nssv2863441,nssv2865447,nssv2867819,nssv2858790,nssv2862463,nssv2864979,nssv2860127,nssv2864946,nssv2863374,nssv2868470,nssv2863840,nssv2864714,nssv2868212,nssv2858576,nssv2861145,nssv2861603,nssv2862076,nssv2863954,nssv2858739,nssv2862526,nssv2865828,nssv2864229,nssv2862966,nssv2867071,nssv2865967,nssv2865787,nssv2868128,nssv2863692,nssv2864133,nssv2865419,nssv2860679,nssv2863827,nssv2864235,nssv2865926,nssv2860605,nssv2859095,nssv2861458,nssv2863143,nssv2859538,nssv2863120,nssv2866303,nssv2868362,nssv2866360 M 2366 0 416 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10836,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11919,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12144,NA12145,NA12146,NA12154,NA12155,NA12234,NA12236,NA12239,NA12249,NA12264,NA12272,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12336,NA12340,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12761,NA12763,NA12766,NA12767,NA12775,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12878,NA12891,NA12892,NA18484,NA18485,NA18487,NA18488,NA18489,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18510,NA18511,NA18516,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18867,NA18868,NA18869,NA18870,NA18872,NA18873,NA18874,NA18875,NA18908,NA18909,NA18910,NA18911,NA18917,NA18923,NA18925,NA18930,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19117,NA19119,NA19121,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19137,NA19141,NA19143,NA19145,NA19146,NA19147,NA19148,NA19150,NA19152,NA19153,NA19154,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19192,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19223,NA19224,NA19225,NA19235,NA19237,NA19247,NA19248,NA19249,NA19256,NA19258,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21387,NA21389,NA21390,NA21391,NA21399,NA21401,NA21403,NA21404,NA21423,NA21425,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21513,NA21522,NA21523,NA21524,NA21525,NA21526,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 dgv322n54 1 72539646 72584492 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546552,nsv546553 M 17421 18 679 "" nsv474792 1 72539847 72539847 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013774 M 9 1 0 "" NA19240 nsv437860 1 72540340 72581139 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv471157,nssv471490,nssv471013,nssv471035,nssv471146,nssv471523,nssv471401,nssv471124,nssv471168,nssv471346,nssv471046,nssv471335,nssv471379,nssv471390,nssv471202,nssv471179,nssv471079,nssv471024,nssv471113,nssv471313,nssv471091,nssv471568,nssv471290,nssv471368,nssv471446,nssv471479,nssv471412,nssv471435,nssv471246,nssv471324,nssv471546,nssv471279,nssv471535,nssv471357,nssv471213,nssv471068,nssv471268,nssv471301,nssv471257,nssv471235,nssv471224,nssv471190,nssv471501,nssv471512,nssv471457,nssv471557,nssv471102,nssv471468,nssv471424,nssv471135,nssv471057 M 269 0 46 "" NA06985,NA06991,NA07000,NA07019,NA07022,NA07029,NA10830,NA10838,NA10839,NA10846,NA10851,NA10855,NA10857,NA10859,NA10860,NA10861,NA11832,NA11881,NA11993,NA11994,NA12003,NA12006,NA12043,NA12057,NA12145,NA12154,NA12707,NA12716,NA12740,NA12751,NA12864,NA12865,NA12873,NA12874,NA18500,NA18501,NA18506,NA18508,NA18515,NA18516,NA19143,NA19145,NA19160,NA19161,NA19200,NA19202 dgv188n100 1 72541074 72575080 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010415,nsv1003225 M 29084 2 2 "" dgv189n100 1 72541074 72575080 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003698,nsv1008358,nsv1000612,nsv1014997 M 29084 0 12 "" dgv190n100 1 72541074 72595373 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999230,nsv1006832,nsv1009774,nsv1013587,nsv1012131,nsv1008476,nsv1003047,nsv997901,nsv1009188,nsv1001710,nsv1000010,nsv1005530,nsv1007534,nsv1010041,nsv1005957 M 29084 0 60 "" nsv1012282 1 72541074 72600554 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474331 M 29084 1 0 "" nsv479840 1 72541488 72541488 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017792 M 9 0 0 "" nsv442908 1 72541504 72583736 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1618193,nssv1618015,nssv1618060,nssv1617990,nssv1618023,nssv1618104,nssv1618181,nssv1618082,nssv1618086,nssv1618210,nssv1618061,nssv1617972,nssv1618206,nssv1617967,nssv1618139,nssv1618136,nssv1618203,nssv1618068,nssv1617993,nssv1618165,nssv1618076,nssv1618070,nssv1617978,nssv1618175,nssv1618172,nssv1618094,nssv1618207,nssv1618034,nssv1618138,nssv1617982,nssv1617965,nssv1618156,nssv1618109,nssv1618148,nssv1617973,nssv1617948,nssv1618174,nssv1618137,nssv1618066,nssv1617951,nssv1617971,nssv1618177,nssv1618178,nssv1618166,nssv1618081,nssv1618011,nssv1618119,nssv1618209,nssv1618031,nssv1618009,nssv1618130,nssv1618087,nssv1617954,nssv1617987,nssv1618115,nssv1618167,nssv1618171,nssv1617998,nssv1618126,nssv1618129,nssv1618085,nssv1618117,nssv1618200,nssv1618029,nssv1618090,nssv1618132,nssv1618003,nssv1618120,nssv1618018,nssv1618133,nssv1618154,nssv1618159,nssv1618183,nssv1618158,nssv1618127,nssv1618197,nssv1618007,nssv1618163,nssv1617953,nssv1617962,nssv1618020,nssv1617952,nssv1618064,nssv1618192,nssv1618134,nssv1618036,nssv1618019,nssv1617950,nssv1617961,nssv1617992,nssv1618095,nssv1618054,nssv1618006,nssv1618026,nssv1617974,nssv1618111,nssv1618079,nssv1618140,nssv1618116,nssv1617964,nssv1618125,nssv1618073,nssv1617994,nssv1618108,nssv1617984,nssv1618103,nssv1618049,nssv1617963,nssv1618063,nssv1618041,nssv1617996,nssv1618055,nssv1618089,nssv1618188,nssv1618005,nssv1617949,nssv1618112,nssv1617999,nssv1618037,nssv1618114,nssv1618101,nssv1618033,nssv1617983,nssv1618155,nssv1618100,nssv1617997,nssv1618059,nssv1618062,nssv1617955,nssv1618053,nssv1618179,nssv1617979,nssv1618075,nssv1618153,nssv1618190,nssv1617976,nssv1618161,nssv1618121,nssv1618145,nssv1618187,nssv1618072,nssv1618043,nssv1618184,nssv1618110,nssv1618186,nssv1618045,nssv1618038,nssv1618042,nssv1618176,nssv1618123,nssv1618204,nssv1618142,nssv1618105,nssv1618164,nssv1618022,nssv1618017,nssv1618198,nssv1618196,nssv1618088,nssv1618000,nssv1618170,nssv1618004,nssv1618150,nssv1618040,nssv1618001,nssv1618056,nssv1618141,nssv1618067,nssv1618147,nssv1618160,nssv1617959,nssv1618128,nssv1618107,nssv1618047,nssv1618118,nssv1618131,nssv1617968,nssv1618149,nssv1617981,nssv1618012,nssv1618194,nssv1618027,nssv1618030,nssv1618106,nssv1618078,nssv1618021,nssv1618143,nssv1617975,nssv1617956,nssv1618195,nssv1618065,nssv1617988,nssv1618032,nssv1618152,nssv1618208,nssv1618189,nssv1618199,nssv1617986,nssv1618039,nssv1618084,nssv1617960,nssv1618093,nssv1618173,nssv1617985,nssv1618096,nssv1618052,nssv1618010,nssv1618028,nssv1618025,nssv1618182,nssv1618014,nssv1617957,nssv1617966,nssv1618077,nssv1617970,nssv1618099,nssv1618092,nssv1618151,nssv1617977,nssv1618074,nssv1618122,nssv1618201,nssv1617989,nssv1618097,nssv1618098,nssv1618144,nssv1617995,nssv1618071,nssv1618016,nssv1618051,nssv1618050,nssv1618083,nssv1618185,nssv1618048,nssv1618044,nssv1618205,nssv1618162,nssv1618008 M 270 0 238 "" NA06985,NA06991,NA06993,NA06994,NA07000,NA07019,NA07022,NA07029,NA07034,NA07048,NA07055,NA07056,NA07345,NA07348,NA07357,NA10830,NA10831,NA10838,NA10839,NA10846,NA10847,NA10851,NA10855,NA10856,NA10857,NA10859,NA10860,NA10861,NA10863,NA11829,NA11830,NA11831,NA11832,NA11840,NA11881,NA11882,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12005,NA12006,NA12043,NA12044,NA12057,NA12144,NA12145,NA12146,NA12154,NA12155,NA12234,NA12236,NA12239,NA12249,NA12264,NA12707,NA12716,NA12740,NA12750,NA12751,NA12752,NA12753,NA12761,NA12762,NA12763,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12864,NA12865,NA12872,NA12873,NA12874,NA12878,NA12891,NA12892,NA18500,NA18501,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18515,NA18516,NA18522,NA18523,NA18524,NA18526,NA18529,NA18532,NA18537,NA18540,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18623,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18855,NA18856,NA18857,NA18858,NA18859,NA18860,NA18861,NA18862,NA18870,NA18872,NA18912,NA18913,NA18914,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18990,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19098,NA19099,NA19100,NA19101,NA19102,NA19119,NA19127,NA19128,NA19129,NA19130,NA19131,NA19137,NA19139,NA19141,NA19143,NA19145,NA19152,NA19153,NA19154,NA19160,NA19161,NA19171,NA19172,NA19173,NA19192,NA19194,NA19200,NA19201,NA19202,NA19204,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19221,NA19223,NA19238 esv3584698 1 72541524 72583736 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838637,essv9838629,essv9838631,essv9838632,essv9838638,essv9838630,essv9838635,essv9838633,essv9838628,essv9838636 M 34 10 0 "" 2RB,KSF008,KSM003,OA003,OA0039,OA005,OA007,OA018,OA062,OA074 esv3584809 1 72541524 72617432 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838732 M 34 1 0 "" OA064 nsv1014451 1 72543719 72569468 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477668 M 29084 1 0 "" dgv323n54 1 72546637 72584280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546558,nsv546559 M 17421 0 2 "" dgv191n100 1 72547710 72585028 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011204,nsv1004132,nsv1015048,nsv1004749,nsv998044,nsv998278,nsv1014523,nsv1002811,nsv1003030 M 29084 13 0 "" dgv192n100 1 72551683 72585028 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009448,nsv1011168,nsv1013038,nsv1010470,nsv1003541,nsv1014140,nsv1008528,nsv1012881,nsv1007157 M 29084 0 64 "" nsv546560 1 72552343 72584280 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717447 M 17421 1 0 "" nsv546561 1 72560236 72584280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717460,nssv717457,nssv717456,nssv717455,nssv717454,nssv717459,nssv717458,nssv717464,nssv717463,nssv717461,nssv717462,nssv717467,nssv717466,nssv717465,nssv717493,nssv717471,nssv717470,nssv717469,nssv717468,nssv717473,nssv717472,nssv717477,nssv717474,nssv717479,nssv717476,nssv717475,nssv717478,nssv717480,nssv717481,nssv717492,nssv717483,nssv717482,nssv717491,nssv717484,nssv717494,nssv717485,nssv717490,nssv717486,nssv717487,nssv717489,nssv717488,nssv717495,nssv717500,nssv717508,nssv717499,nssv717497,nssv717498,nssv717496,nssv717501,nssv717505,nssv717504,nssv717503,nssv717502,nssv717507,nssv717506,nssv717515,nssv717510,nssv717509,nssv717511,nssv717514,nssv717512,nssv717513,nssv717520,nssv717519,nssv717517,nssv717516,nssv717518,nssv717524,nssv717521,nssv717522,nssv717523,nssv717453,nssv717452,nssv717448,nssv717451,nssv717450,nssv717449 M 17421 0 77 "" dgv193n100 1 72561301 72584492 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012182,nsv1005068,nsv1001688 M 29084 7 0 "" nsv1003717 1 72562187 72583724 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469165,nssv3478672 M 29084 0 2 "" nsv546562 1 72568121 72584280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717525 M 17421 0 1 "" dgv194n100 1 72569439 72583724 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000019,nsv1004873 M 29084 0 5 "" nsv509313 1 72576470 72584398 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619805 M 4 1 0 "" NA10860 esv2422432 1 72594444 72921239 CNV deletion Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161297 M 181 0 1 "" ND03704 nsv519970 1 72609827 72610078 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689963,nssv659734 M 2026 0 2 "" nsv481432 1 72614669 72614669 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014014 M 9 0 0 "" nsv1002115 1 72618143 75171956 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463430 M 29084 1 0 C1orf173,CRYZ,FPGT,FPGT-TNNI3K,LRRIQ3,TNNI3K,TYW3 nsv830215 1 72641637 72802375 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447151 M 95 1 0 "" nsv546563 1 72728625 72814467 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717526 M 17421 0 1 "" nsv528366 1 72732599 72733119 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704953 M 2026 0 1 "" esv3893690 1 72748465 72765443 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796909,essv25797357 M 3017 0 2 "" esv2566918 1 72753471 72754510 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5367062 M 1 1 0 "" NA18507 dgv195n100 1 72780550 72860746 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011385,nsv1000283,nsv997766,nsv1007535,nsv1005157,nsv1001781,nsv1000359 M 29084 0 58 "" dgv324n54 1 72782711 72874351 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546565,nsv546564 M 17421 0 6 "" dgv3e55 1 72784767 72860767 CNV loss Pinto_et_al_2007 17911159 SNP array esv2750838,esv2750839 M 771 0 6 "" SPC_133,SPC_155 esv3442343 1 72791156 72791175 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594768 M 185 1 0 "" NA11931 nsv516582 1 72793831 72856809 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv677061,nssv702027,nssv669332,nssv672126,nssv705429 M 2026 2 3 "" nsv160576 1 72795170 72795225 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179154 M 24 "" dgv325n54 1 72813178 72851740 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546566,nsv546567 M 17421 0 2 "" esv3893701 1 72848011 72908133 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797853 M 3017 0 1 "" esv2763560 1 72850036 72894850 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032134 M 1109 0 1 "" SW_1412 esv2758940 1 72869688 72887793 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756845 M 270 1 0 "" NA18632 esv28206 1 72895921 72896531 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19416 M 40 0 1 "" NA19257 esv3362465 1 72945644 72945665 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863714 M 185 1 0 "" NA12005 esv2758941 1 72954200 73079758 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757735 M 270 1 0 "" NA18632 esv3350707 1 72979904 72979934 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674082 M 185 1 0 "" NA12891 esv3308806 1 72979915 72979916 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837640,essv7838849 M 185 2 0 "" NA19238,NA19240 nsv1013549 1 72981628 73180961 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475594 M 29084 1 0 "" nsv10261 1 73028775 73030984 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv18424 M 31 0 1 "" NA10839 nsv1001105 1 73035146 73092087 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465379 M 29084 0 1 "" nsv1014200 1 73082631 73118435 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476621 M 29084 0 1 "" esv2344712 1 73107879 73108306 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4745829 M 1 0 1 "" NA18507 nsv1012319 1 73110006 73319674 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474358 M 29084 1 0 "" nsv478501 1 73185283 73185283 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016167 M 9 1 0 "" NA18507 esv3348582 1 73211746 73211789 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899349,essv8899347 M 185 2 0 "" NA18545,NA18561 esv3307319 1 73211758 73211759 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7757483,essv7745104 M 185 2 0 "" NA18545,NA18561 esv3403122 1 73295086 73299687 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808978 M 185 0 0 "" NA12878 nsv546568 1 73301863 73329434 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717535 M 17421 0 1 "" nsv1010267 1 73323757 73401019 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699587 M 29084 0 1 "" nsv945998 1 73337548 73345977 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770531,nssv1770563,nssv1773195,nssv1770554,nssv1773196,nssv1770565,nssv1770589,nssv1770538,nssv1770529,nssv1770575,nssv1770588,nssv1770550,nssv1770597,nssv1770583,nssv1773197,nssv1770570,nssv1770526,nssv1770567,nssv1773191,nssv1770543,nssv1770532,nssv1770571,nssv1773190,nssv1770568,nssv1770590,nssv1770561,nssv1770593,nssv1772259,nssv1770596,nssv1770569,nssv1770533,nssv1770604,nssv1770530,nssv1770584,nssv1770540,nssv1770536,nssv1773185,nssv1770600,nssv1770535,nssv1770587,nssv1770595,nssv1770606,nssv1770528,nssv1770603,nssv1770542,nssv1770560,nssv1770591,nssv1770586,nssv1770594,nssv1770579,nssv1773189,nssv1770557,nssv1773187,nssv1770605,nssv1770527,nssv1770573,nssv1773188,nssv1770547,nssv1770592,nssv1770582,nssv1773192,nssv1770556,nssv1773186,nssv1770549,nssv1773194,nssv1770576,nssv1773184,nssv1770572,nssv1773193,nssv1770558,nssv1770539,nssv1770537,nssv1770551,nssv1770555,nssv1770601,nssv1770541,nssv1770585,nssv1770553,nssv1770577,nssv1770534,nssv1770607,nssv1770545,nssv1770548,nssv1770578,nssv1770581,nssv1770564,nssv1770574,nssv1770562,nssv1770580,nssv1770546,nssv1770602,nssv1770552,nssv1770598,nssv1770559,nssv1770544,nssv1770566,nssv1770599 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1387 1 73349592 73390247 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4310,nssv1195,nssv5641,nssv10030,nssv9306,nssv6666 M 9 6 0 "" NA12156,NA12878,NA18517,NA18956,NA19129,NA19240 nsv509324 1 73353192 73356287 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619806 M 4 1 0 "" NA10860 nsv509335 1 73362535 73362535 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623784 M 4 1 0 "" NA18994 esv995897 1 73367487 73367752 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564125 M 3 1 0 "" HuRef nsv499463 1 73367568 73368149 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv586157 M 9 1 0 "" esv1509362 1 73367621 73367621 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4355980 M 2 1 0 "" HuRef esv3412156 1 73383688 73383700 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863715 M 185 1 0 "" NA12005 esv2758942 1 73385687 73548272 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757736 M 270 1 0 "" NA19194 nsv546569 1 73406601 73420497 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717536 M 17421 0 1 "" nsv1010261 1 73425164 73549923 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699588 M 29084 0 1 "" esv2764157 1 73425176 73550688 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032145,essv7032156 M 1109 0 2 "" SW_0147,SW_1282 nsv546570 1 73438432 73543933 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717537,nssv717538 M 17421 0 2 "" nsv546571 1 73442433 73510399 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717539 M 17421 0 1 "" esv3893712 1 73442433 73549261 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789593,essv25789992 M 3017 2 0 "" nsv10273 1 73452623 73484938 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv14428,nssv13107 M 31 2 0 "" NA19132,NA19144 nsv441696 1 73454531 73483916 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656672,nssv1656671,nssv1656676,nssv1656674,nssv1656677,nssv1656675,nssv1656673 M 270 7 0 "" NA19131,NA19132,NA19137,NA19144,NA19193,NA19194,NA19204 nsv513991 1 73454688 73479192 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2860376,nssv2865995,nssv2866919,nssv2866228,nssv2862941,nssv2865771,nssv2860048,nssv2861873,nssv2867336,nssv2859734,nssv2864666,nssv2862564 M 2366 12 0 "" NA18489,NA19098,NA19131,NA19132,NA19137,NA19144,NA19175,NA19182,NA19183,NA19193,NA19194,NA19204 nsv1006711 1 73483904 73541791 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469444 M 29084 0 1 "" esv2762152 1 73483916 73549935 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005580 M 1109 0 1 "" RW_0322 nsv461962 1 73514607 73682643 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538269 M 1557 1 0 "" HGDP00760 nsv546572 1 73514607 73682643 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173020 M 17421 1 0 "" HGDP00760 nsv506934 1 73525156 73531156 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619236,nssv617532,nssv623270,nssv620657 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 esv2544992 1 73525573 73527261 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5183148 M 1 0 1 "" NA18507 esv9534 1 73525934 73526758 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31975 M 1 0 0 "" esv2412229 1 73525996 73526713 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4932550 M 1 0 1 "" NA18507 esv4715 1 73526139 73526570 CNV loss Wang_et_al_2008 18987735 Sequencing essv27156 M 1 0 1 "" YH esv2532138 1 73526186 73526500 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5234781 M 1 0 1 "" NA18507 esv1525281 1 73526195 73526510 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3644641 M 2 0 1 "" HuRef esv1007056 1 73541371 73541721 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575847 M 3 0 1 "" HuRef esv1517216 1 73541371 73541722 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3721076 M 2 0 1 "" HuRef esv2762076 1 73554632 73591842 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032167,essv7032178 M 1109 0 2 "" SW_0590,SW_1139 nsv1002316 1 73558816 73589152 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466018,nssv3474023 M 29084 0 2 "" nsv1012862 1 73578798 73670618 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479753,nssv3478500 M 29084 0 2 "" nsv506935 1 73628280 73634280 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623271 M 4 0 0 "" NA18994 esv3430102 1 73683686 73683705 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594780 M 185 1 0 "" NA19141 esv3444958 1 73683693 73683709 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674083 M 185 1 0 "" NA19239 esv3309588 1 73683696 73683697 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838281 M 185 1 0 "" NA12891 esv1002539 1 73696249 73699314 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564783 M 3 0 1 "" HuRef nsv830226 1 73722727 73897891 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447162,nssv1447173 M 95 2 0 "" esv3893723 1 73881559 74484769 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25790397,essv25788453 M 3017 2 0 FPGT,FPGT-TNNI3K,LRRIQ3,TNNI3K nsv830237 1 73948857 74125079 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447185 M 95 1 0 "" dgv326n54 1 74040647 74101956 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546573,nsv546574 M 17421 0 2 "" esv5920 1 74084910 74085421 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28361 M 1 0 0 "" esv993926 1 74085020 74085270 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580432 M 3 0 1 "" HuRef nsv508018 1 74095744 74101744 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618496 M 4 0 0 "" CHM nsv522147 1 74111118 74756423 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694920 M 2026 0 1 FPGT,FPGT-TNNI3K,LRRIQ3,TNNI3K nsv1398 1 74125978 74170968 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7224 M 9 0 1 "" NA12156 esv2763561 1 74134597 74169484 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032190 M 1109 1 0 "" SW_0861 esv2763562 1 74170366 74182940 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032201 M 1109 0 1 "" SW_0861 nsv470717 1 74218172 74305175 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547735 M 443 0 1 LRRIQ3 HGDP01216 nsv1411 1 74243973 74271151 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7232 M 9 0 1 LRRIQ3 NA12156 esv3349223 1 74244233 74244245 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674086,essv8674085 M 185 2 0 "" NA19239,NA19240 esv3335195 1 74244233 74244252 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594791 M 185 1 0 "" NA19141 esv3401051 1 74244237 74244249 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899352,essv8899363,essv8899351,essv8899365,essv8899367,essv8899368,essv8899350,essv8899354,essv8899357,essv8899369,essv8899353,essv8899355,essv8899360,essv8899371,essv8899366,essv8899358,essv8899361,essv8899364,essv8899356,essv8899362 M 185 20 0 "" NA07000,NA07357,NA10851,NA11881,NA11919,NA11920,NA12154,NA12414,NA12717,NA12749,NA12763,NA18499,NA18501,NA18511,NA18522,NA18870,NA18909,NA19093,NA19116,NA19147 esv3360567 1 74297611 74297633 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899373,essv8899375,essv8899372,essv8899374 M 185 4 0 LRRIQ3 NA18523,NA18861,NA19114,NA19257 esv3307830 1 74297615 74297616 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7747012,essv7754991,essv7750518,essv7754845 M 185 4 0 LRRIQ3 NA18523,NA18861,NA19114,NA19257 nsv523474 1 74471687 74566707 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699235 M 2026 0 1 FPGT-TNNI3K,TNNI3K nsv546575 1 74515622 74594425 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717542,nssv717543 M 17421 0 2 FPGT-TNNI3K,TNNI3K esv6294 1 74519463 74519650 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28735 M 1 0 0 FPGT-TNNI3K,TNNI3K esv2350476 1 74527555 74528078 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4930344 M 1 0 1 FPGT-TNNI3K,TNNI3K NA18507 esv4202 1 74527661 74527957 CNV loss Wang_et_al_2008 18987735 Sequencing essv26643 M 1 0 1 FPGT-TNNI3K,TNNI3K YH esv1000471 1 74527756 74527876 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579269 M 3 0 1 FPGT-TNNI3K,TNNI3K HuRef esv1327381 1 74527758 74527879 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3610332 M 2 0 1 FPGT-TNNI3K,TNNI3K HuRef nsv546576 1 74549396 74577421 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717544 M 17421 0 1 FPGT-TNNI3K,TNNI3K nsv1010042 1 74571444 74774565 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469643 M 29084 1 0 FPGT-TNNI3K,TNNI3K nsv461984 1 74577421 74647059 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538287 M 1557 0 1 FPGT-TNNI3K,TNNI3K NINDS_142 nsv546577 1 74577421 74647059 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173021 M 17421 0 1 FPGT-TNNI3K,TNNI3K NINDS_142 nsv820047 1 74607839 74608533 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419058 M 2 0 1 FPGT-TNNI3K,TNNI3K AK1 esv3379315 1 74681065 74681139 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674088 M 185 1 0 FPGT-TNNI3K,TNNI3K NA19238 esv3310253 1 74681075 74681076 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838739 M 185 1 0 FPGT-TNNI3K,TNNI3K NA19238 nsv830248 1 74734979 74917046 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447196 M 95 0 1 C1orf173,FPGT-TNNI3K,TNNI3K nsv525557 1 74750293 74764232 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701696 M 2026 0 1 FPGT-TNNI3K,TNNI3K nsv1003356 1 74756269 74797526 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469130 M 29084 0 1 FPGT-TNNI3K,TNNI3K esv2549117 1 74756678 74758253 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5369116 M 1 0 1 FPGT-TNNI3K,TNNI3K NA18507 esv1932816 1 74756934 74758046 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4821137 M 1 0 1 FPGT-TNNI3K,TNNI3K NA18507 nsv830259 1 74861765 75013650 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447207 M 95 1 0 C1orf173,CRYZ,TYW3 nsv473205 1 74898686 74898686 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015643 M 9 1 0 C1orf173 NA19129 nsv461995 1 74905730 74939211 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538296 M 1557 1 0 C1orf173 1780862074_A nsv546578 1 74905730 74939211 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173022 M 17421 1 0 C1orf173 1780862074_A esv1982102 1 74909304 74909696 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4946556 M 1 0 1 C1orf173 NA18507 esv1344845 1 74909463 74909563 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4226483 M 2 0 1 C1orf173 HuRef esv2762153 1 74914793 74943799 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005581 M 1109 1 0 CRYZ RW_0582 esv3398349 1 74920623 74920642 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594802,essv9594824,essv9594813,essv9594835 M 185 4 0 "" NA11894,NA12043,NA12045,NA12287 esv3303261 1 74920631 74920632 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7824006,essv7802487,essv7772752,essv7771879,essv7819843,essv7828479,essv7815537,essv7834784,essv7771567,essv7824679,essv7803445,essv7772221,essv7779943,essv7785368,essv7787358,essv7803179,essv7807792,essv7787715,essv7813636,essv7788731,essv7816732,essv7790949,essv7774561,essv7777194,essv7824250,essv7811791,essv7809095,essv7776848,essv7798496,essv7788359,essv7835384,essv7781979,essv7820944,essv7822594,essv7783095,essv7835882,essv7797983,essv7812941,essv7826564,essv7778343,essv7822125,essv7830920,essv7784738,essv7779145,essv7792633,essv7814533,essv7780461,essv7796626,essv7815046,essv7811048,essv7794592,essv7773416,essv7793372,essv7830502,essv7801490,essv7830037,essv7770158,essv7810723,essv7785732,essv7829049 M 185 60 0 "" NA06986,NA07000,NA07037,NA07051,NA11840,NA11894,NA11918,NA11994,NA11995,NA12043,NA12045,NA12144,NA12249,NA12287,NA12414,NA12717,NA12750,NA12761,NA12776,NA12891,NA18498,NA18526,NA18537,NA18545,NA18552,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18593,NA18603,NA18605,NA18608,NA18638,NA18940,NA18942,NA18944,NA18945,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18960,NA18964,NA18965,NA18973,NA18980,NA19005 esv3355462 1 74920632 74920644 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899383,essv8899395,essv8899393,essv8899388,essv8899434,essv8899394,essv8899418,essv8899396,essv8899404,essv8899427,essv8899398,essv8899387,essv8899421,essv8899417,essv8899409,essv8899406,essv8899402,essv8899379,essv8899377,essv8899433,essv8899426,essv8899391,essv8899423,essv8899380,essv8899411,essv8899431,essv8899401,essv8899399,essv8899397,essv8899389,essv8899378,essv8899420,essv8899382,essv8899410,essv8899424,essv8899390,essv8899419,essv8899416,essv8899435,essv8899415,essv8899432,essv8899407,essv8899412,essv8899437,essv8899430,essv8899408,essv8899400,essv8899384,essv8899386,essv8899385,essv8899405,essv8899376,essv8899413,essv8899429,essv8899428,essv8899422 M 185 56 0 "" NA06986,NA07000,NA07037,NA07051,NA11894,NA11918,NA11994,NA11995,NA12043,NA12144,NA12249,NA12414,NA12717,NA12750,NA12761,NA12776,NA18498,NA18526,NA18537,NA18545,NA18552,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18593,NA18603,NA18605,NA18608,NA18638,NA18940,NA18942,NA18944,NA18945,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18960,NA18964,NA18965,NA18973,NA18980,NA19005 esv3344244 1 74920636 74920684 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674089 M 185 1 0 "" NA12891 nsv509346 1 74963212 74977417 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617995 M 4 1 0 CRYZ,TYW3 CHM nsv1422 1 74968224 74970880 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4320 M 9 1 0 CRYZ NA12878 nsv546579 1 74970121 74973074 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717545 M 17421 0 1 CRYZ,TYW3 esv21668 1 74970760 74971244 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10394 M 40 1 0 CRYZ NA12828 nsv473292 1 74997237 74997237 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019105 M 9 1 0 TYW3 NA19129 esv2422835 1 75047219 75049289 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5162824 M 1 0 1 "" NA18507 nsv546580 1 75054852 75075035 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717546 M 17421 0 1 "" esv3451530 1 75074251 75074270 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594846 M 185 1 0 "" NA12814 esv3421935 1 75074258 75074265 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899442,essv8899443,essv8899455,essv8899440,essv8899452,essv8899441,essv8899444,essv8899449,essv8899446,essv8899450,essv8899457,essv8899438,essv8899454,essv8899439,essv8899456,essv8899451,essv8899445,essv8899453 M 185 18 0 "" NA07347,NA10847,NA11829,NA11920,NA11992,NA12154,NA12155,NA12249,NA18499,NA18526,NA18563,NA18564,NA18566,NA18573,NA18603,NA18608,NA18949,NA18961 esv3325868 1 75074258 75074272 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674090,essv8674092,essv8674091 M 185 3 0 "" NA12878,NA12891,NA12892 nsv1011649 1 75141072 75167993 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471675 M 29084 0 1 "" esv3410459 1 75160300 75160319 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594857 M 185 1 0 "" NA11840 nsv1433 1 75178403 75211188 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6674 M 9 1 0 "" NA12156 nsv478887 1 75203262 75203262 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016653 M 9 1 0 "" NA18507 nsv521974 1 75222180 75222557 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694115 M 2026 0 1 "" nsv823220 1 75246063 75256391 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1426482 M 31 0 1 "" NA18592 nsv508293 1 75264005 75314203 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620133 M 4 0 1 "" NA15510 esv3333790 1 75329749 75329761 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674096,essv8674093,essv8674094,essv8674095 M 185 4 0 "" NA12892,NA19238,NA19239,NA19240 nsv1444 1 75396262 75429316 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7244 M 9 1 0 LHX8 NA12156 esv2632878 1 75398857 75400331 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5375534 M 1 0 1 LHX8 NA18507 nsv477104 1 75407427 75407427 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019803 M 9 1 0 "" NA18517 nsv475085 1 75443852 75443852 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017664 M 9 1 0 SLC44A5 NA18956 nsv997508 1 75482252 75521508 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463779 M 29084 1 0 SLC44A5 esv2762155 1 75490556 75495739 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005582 M 1109 0 1 SLC44A5 RW_0254 esv1169956 1 75518418 75518418 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4150752 M 2 1 0 SLC44A5 HuRef esv1320217 1 75518557 75518557 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3871372 M 2 1 0 SLC44A5 HuRef nsv1455 1 75584965 75636770 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5652,nssv4340,nssv1206,nssv10042,nssv2191 M 9 0 5 SLC44A5 NA12878,NA18555,NA18956,NA19129,NA19240 nsv519329 1 75603026 76131179 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv693180,nssv655463 M 2026 2 0 ACADM,MSH4,RABGGTB,SLC44A5,SNORD45A,SNORD45B,SNORD45C nsv508304 1 75611360 75630014 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618973,nssv617481,nssv622767,nssv620134 M 4 0 4 SLC44A5 CHM,NA10860,NA15510,NA18994 nsv435643 1 75613443 75621564 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466051 M 2 0 1 SLC44A5 NA15510 esv1008813 1 75614443 75626687 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564309 M 3 0 1 SLC44A5 HuRef nsv498673 1 75615356 75621732 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585385 M 9 0 1 SLC44A5 esv1527298 1 75615913 75621318 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3655324 M 2 0 1 SLC44A5 HuRef nsv1011915 1 75651918 75707141 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699589 M 29084 1 0 SLC44A5 nsv546581 1 75669643 75710017 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717547 M 17421 0 1 SLC44A5 nsv477434 1 75740315 75740315 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015500 M 9 1 0 SLC44A5 NA18517 esv2758943 1 75759492 75960336 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757737,esv2756846 M 270 0 2 SLC44A5 NA19221,NA19223 nsv830270 1 75774808 75805744 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447229,nssv1447240,nssv1447218,nssv1447251,nssv1447262 M 95 0 5 SLC44A5 esv2613586 1 75783906 75785524 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5347859 M 1 0 1 SLC44A5 NA18507 esv7181 1 75784246 75785049 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29622 M 1 0 0 SLC44A5 esv1954052 1 75784266 75784995 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4812763 M 1 0 1 SLC44A5 NA18507 esv4835 1 75784304 75784934 CNV loss Wang_et_al_2008 18987735 Sequencing essv27276 M 1 0 1 SLC44A5 YH esv1010081 1 75784453 75784782 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584778 M 3 0 1 SLC44A5 HuRef nsv159607 1 75784454 75784783 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178185 M 24 SLC44A5 esv1700928 1 75784469 75784799 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4239670 M 2 0 1 SLC44A5 HuRef esv994396 1 75785040 75785348 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563879 M 3 0 1 SLC44A5 HuRef nsv945999 1 75819844 75821064 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770694,nssv1770666,nssv1770611,nssv1770640,nssv1770618,nssv1770641,nssv1770614,nssv1770695,nssv1770615,nssv1770663,nssv1770610,nssv1770696,nssv1770626,nssv1770659,nssv1770630,nssv1770631,nssv1770619,nssv1770667,nssv1770616,nssv1770661,nssv1770688,nssv1770701,nssv1770686,nssv1770656,nssv1770690,nssv1770698,nssv1770620,nssv1770671,nssv1770685,nssv1770668,nssv1770687,nssv1770647,nssv1770612,nssv1770608,nssv1770639,nssv1770672,nssv1770623,nssv1770660,nssv1770622,nssv1770683,nssv1770621,nssv1770680,nssv1770693,nssv1770658,nssv1770625,nssv1770662,nssv1770609,nssv1770646,nssv1770613,nssv1770703,nssv1770692,nssv1770665,nssv1770617,nssv1770677,nssv1770629,nssv1770697,nssv1770636,nssv1770633,nssv1770691,nssv1770644,nssv1770627,nssv1770635,nssv1770637,nssv1770664,nssv1770624,nssv1770681,nssv1770628,nssv1770670,nssv1770689,nssv1770684,nssv1770632,nssv1770642,nssv1770700,nssv1770702,nssv1770651,nssv1770674,nssv1770653,nssv1770676,nssv1770679,nssv1770654,nssv1770657,nssv1770669,nssv1770675,nssv1770648,nssv1770649,nssv1770652,nssv1770682,nssv1770645,nssv1770704,nssv1770699,nssv1770655,nssv1770673,nssv1770678,nssv1770650,nssv1770638,nssv1770634,nssv1770643 M 97 10 0 SLC44A5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3390264 1 75833973 75833992 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594891 M 185 1 0 SLC44A5 NA11918 nsv10284 1 75852543 75855368 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16770 M 31 1 0 "" NA19221 nsv10295 1 75857994 75891880 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv17100 M 31 0 1 "" NA19221 dgv196n100 1 75859351 75897954 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003742,nsv997990,nsv998205 M 29084 0 6 "" nsv546582 1 75860980 75898793 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717548 M 17421 0 1 "" nsv546583 1 75860980 75907353 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717549 M 17421 1 0 "" dgv4e55 1 75866822 75894326 CNV loss Pinto_et_al_2007 17911159 SNP array esv34738,esv34562 M 771 0 5 "" NA19221,NA19223 nsv830281 1 75867880 76023641 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447273 M 95 0 1 ACADM nsv10306 1 75891880 75901232 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv17430 M 31 0 1 "" NA19221 nsv10317 1 75906355 75907919 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16423 M 31 0 1 "" NA18504 nsv946000 1 75980990 75982689 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1770707,nssv1771724,nssv1770717,nssv1771656,nssv1771710,nssv1771672,nssv1771657,nssv1771722,nssv1770712,nssv1771671,nssv1771660,nssv1771670,nssv1770711,nssv1771686,nssv1770708,nssv1771694,nssv1771658,nssv1771655,nssv1771647,nssv1771654,nssv1771711,nssv1771718,nssv1771649,nssv1771684,nssv1770715,nssv1771682,nssv1771714,nssv1771673,nssv1771706,nssv1771676,nssv1771715,nssv1771716,nssv1771709,nssv1771652,nssv1770716,nssv1771669,nssv1770709,nssv1771719,nssv1771708,nssv1771678,nssv1770719,nssv1771681,nssv1771707,nssv1770705,nssv1770714,nssv1771693,nssv1771713,nssv1771703,nssv1770718,nssv1771661,nssv1770713,nssv1771687,nssv1770710,nssv1771674,nssv1771653,nssv1771692,nssv1770706,nssv1771665,nssv1771650,nssv1771688,nssv1771646,nssv1771666,nssv1771651,nssv1771679,nssv1771648,nssv1771664,nssv1771645,nssv1771697,nssv1771712,nssv1771683,nssv1771644,nssv1771717,nssv1771721,nssv1771691,nssv1771685,nssv1771675,nssv1771690,nssv1771699,nssv1771667,nssv1771723,nssv1771659,nssv1771704,nssv1771698,nssv1771725,nssv1771677,nssv1771680,nssv1771668,nssv1771662,nssv1771695,nssv1771700,nssv1771701,nssv1771705,nssv1771689,nssv1771696,nssv1771702,nssv1771663,nssv1771720 M 97 10 0 ACADM HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2763563 1 76002427 76017962 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032212 M 1109 0 1 "" SW_1569 nsv1466 1 76053545 76072066 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7248 M 9 0 1 MSH4 NA12156 nsv1004669 1 76073786 76182039 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471255 M 29084 0 1 ASB17,MSH4 nsv472748 1 76077536 76077536 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010875 M 9 1 0 MSH4 NA18555 esv1918463 1 76105453 76105878 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4533638 M 1 0 1 MSH4 NA18507 esv2575184 1 76122788 76126062 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5307801 M 1 0 1 MSH4 NA18507 esv1540402 1 76123913 76123913 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4261417 M 2 1 0 MSH4 HuRef esv1749246 1 76123920 76123920 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4181343 M 2 1 0 MSH4 HuRef esv1103396 1 76124151 76124839 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3618724 M 2 0 1 MSH4 HuRef esv2475692 1 76144261 76145402 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5306904 M 1 1 0 MSH4 NA18507 esv2605515 1 76165074 76166137 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5264746 M 1 1 0 ASB17 NA18507 esv3401353 1 76165554 76165587 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899462,essv8899461,essv8899465,essv8899463,essv8899458,essv8899460,essv8899466,essv8899464 M 185 8 0 ASB17 NA07037,NA07346,NA12003,NA12004,NA18501,NA18510,NA18517,NA18964 esv3304877 1 76165555 76165556 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7752563,essv7742645,essv7750749,essv7741134,essv7757103,essv7760135,essv7761089,essv7744152 M 185 8 0 ASB17 NA07037,NA07346,NA12003,NA12004,NA18501,NA18510,NA18517,NA18964 nsv475158 1 76245319 76245319 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019195 M 9 1 0 "" NA19240 nsv1477 1 76288551 76306927 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6683 M 9 0 1 "" NA12156 nsv521786 1 76298371 76308022 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694554 M 2026 0 1 "" nsv518927 1 76346202 76358860 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696392 M 2026 0 1 ST6GALNAC3 nsv522056 1 76346202 76370797 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694827 M 2026 0 1 ST6GALNAC3 nsv1488 1 76360210 76405223 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7263 M 9 0 1 ST6GALNAC3 NA12156 nsv947432 1 76363841 76374495 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2760525 M 97 1 0 ST6GALNAC3 HGDP00927 esv28849 1 76383308 76386505 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16389 M 40 0 1 ST6GALNAC3 NA18907 dgv197n100 1 76464645 76497240 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008763,nsv1001452 M 29084 0 2 ST6GALNAC3 nsv546584 1 76465955 76493752 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717550 M 17421 0 1 ST6GALNAC3 nsv523526 1 76467944 76493752 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699300 M 2026 0 1 ST6GALNAC3 nsv1499 1 76477569 76522276 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5659 M 9 0 1 ST6GALNAC3 NA19129 esv3364194 1 76503175 76503187 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863716 M 185 1 0 ST6GALNAC3 NA18871 esv2108639 1 76515638 76516075 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4643097 M 1 0 1 ST6GALNAC3 NA18507 dgv198n100 1 76549911 76672563 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006776,nsv1014231 M 29084 2 0 ST6GALNAC3 nsv462006 1 76598867 76814993 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538305 M 1557 0 1 ST6GALNAC3 1780862125_A nsv546585 1 76598867 76814993 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173023 M 17421 0 1 ST6GALNAC3 1780862125_A esv274979 1 76672052 76677940 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585566 M 1250 0 1 ST6GALNAC3 dgv52n67 1 76673246 76675916 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823242,nsv823231 M 31 0 2 ST6GALNAC3 NA18537,NA18947 nsv997827 1 76701616 76974045 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464499 M 29084 0 1 ST6GALNAC3 nsv462017 1 76712744 76755033 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538312 M 1557 0 1 ST6GALNAC3 HGDP00274 nsv546586 1 76712744 76755033 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173024 M 17421 0 1 ST6GALNAC3 HGDP00274 nsv462028 1 76720632 76749110 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538318 M 1557 0 1 ST6GALNAC3 HGDP00307 nsv546587 1 76720632 76749110 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173025 M 17421 0 1 ST6GALNAC3 HGDP00307 nsv470718 1 76720632 76792185 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547737,nssv547738,nssv547736 M 443 0 3 ST6GALNAC3 HGDP00290,HGDP00315,HGDP00326 dgv20n27 1 76720632 76792574 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv462039,nsv462073,nsv462062,nsv462050 M 1557 0 4 ST6GALNAC3 HGDP00286,HGDP00290,HGDP00315,HGDP00326 dgv327n54 1 76720632 76792574 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546588,nsv546589 M 17421 0 4 ST6GALNAC3 HGDP00286,HGDP00290,HGDP00315,HGDP00326 nsv526433 1 76803352 77040803 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702736 M 2026 0 1 ST6GALNAC3 nsv508315 1 76812673 76907318 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618974 M 4 0 1 ST6GALNAC3 NA10860 esv2437446 1 76872444 76874045 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5315539 M 1 0 1 "" NA18507 esv2414305 1 76872769 76873437 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4514077 M 1 0 1 "" NA18507 esv1003900 1 76872954 76873236 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581003 M 3 0 1 "" HuRef esv1721845 1 76872963 76873246 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4323927 M 2 0 1 "" HuRef esv23112 1 76878796 76884893 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18334 M 40 0 3 "" NA06985,NA18511,NA19108 esv2647937 1 76884027 76885579 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5330535 M 1 0 1 "" NA18507 esv2151586 1 76884574 76885065 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4741240 M 1 0 1 "" NA18507 esv1061888 1 76884728 76884850 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4268777 M 2 0 1 "" HuRef esv3330375 1 76903152 76903550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692414 M 185 1 0 "" NA19238 nsv1005649 1 76913627 77171335 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473891 M 29084 0 1 ST6GALNAC5 nsv462084 1 76916769 76949777 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538338 M 1557 0 1 "" NINDS_130 nsv546590 1 76916769 76949777 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173030 M 17421 0 1 "" NINDS_130 nsv525417 1 76926907 76936481 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701541 M 2026 0 1 "" nsv946001 1 76933564 76939030 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771748,nssv1771786,nssv1771744,nssv1771774,nssv1771742,nssv1771795,nssv1771741,nssv1771820,nssv1771729,nssv1771759,nssv1771747,nssv1771797,nssv1771735,nssv1771770,nssv1771754,nssv1771799,nssv1771812,nssv1771798,nssv1771803,nssv1771819,nssv1771807,nssv1771781,nssv1771733,nssv1771821,nssv1771757,nssv1771817,nssv1771740,nssv1771767,nssv1771728,nssv1771802,nssv1771746,nssv1771761,nssv1771730,nssv1771801,nssv1771805,nssv1771818,nssv1771808,nssv1771758,nssv1771804,nssv1771791,nssv1771732,nssv1771771,nssv1771738,nssv1771760,nssv1771755,nssv1771796,nssv1771806,nssv1771768,nssv1771811,nssv1771773,nssv1771739,nssv1771752,nssv1771750,nssv1771769,nssv1771731,nssv1771815,nssv1771810,nssv1771751,nssv1771743,nssv1771784,nssv1771737,nssv1771777,nssv1771736,nssv1771822,nssv1771745,nssv1771785,nssv1771809,nssv1771749,nssv1771734,nssv1771726,nssv1771727,nssv1771789,nssv1771763,nssv1771766,nssv1771775,nssv1771753,nssv1771790,nssv1771762,nssv1771782,nssv1771816,nssv1771794,nssv1771779,nssv1771800,nssv1771783,nssv1771814,nssv1771780,nssv1771787,nssv1771772,nssv1771778,nssv1771776,nssv1771756,nssv1771765,nssv1771793,nssv1771792,nssv1771764,nssv1771788,nssv1771813 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv199n100 1 76938423 76966247 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998628,nsv1007154,nsv1000499 M 29084 14 0 "" esv2764229 1 76939403 76964137 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005585,essv7005583,essv7005586,essv7005584,essv7005587,essv7005588 M 1109 6 0 "" RW_0096,RW_0176,RW_0184,RW_0203,RW_0540,RW_0666 nsv520575 1 76939403 76968620 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv672724,nssv681294,nssv686480,nssv679416,nssv690063,nssv683796 M 2026 6 0 "" nsv508019 1 76948085 76954085 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621470,nssv622291,nssv624213 M 4 0 0 "" NA10860,NA15510,NA18994 nsv521661 1 76969606 76986588 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698278 M 2026 0 1 "" esv2758944 1 77011006 77075473 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756847 M 270 0 1 "" NA11830 nsv10328 1 77016419 77065885 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv12757 M 31 0 1 "" NA11830 esv2761632 1 77026310 77031414 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032234,essv7032223 M 1109 0 2 "" SW_0103,SW_1096 esv3362238 1 77037655 77037687 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899469,essv8899468,essv8899467 M 185 3 0 "" NA18522,NA18523,NA19257 esv3307313 1 77037662 77037663 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7816937,essv7782091,essv7778635,essv7805913 M 185 4 0 "" NA18522,NA18523,NA19141,NA19257 esv3390117 1 77037667 77037686 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594902 M 185 1 0 "" NA19141 nsv474012 1 77059793 77059793 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016680 M 9 1 0 "" NA12156 nsv159626 1 77070546 77077991 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178204 M 24 "" nsv1510 1 77077208 77111461 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7272 M 9 1 0 ST6GALNAC5 NA12156 nsv1003386 1 77077785 77148124 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469166 M 29084 1 0 ST6GALNAC5 esv1425749 1 77078020 77078020 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4209546 M 2 1 0 "" HuRef nsv160844 1 77078021 77078021 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179422 M 24 "" nsv820187 1 77104310 77107021 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419468 M 2 1 0 ST6GALNAC5 AK1 dgv200n100 1 77148124 77203327 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005548,nsv1006696,nsv999350 M 29084 4 0 ST6GALNAC5 esv3893734 1 77160219 77210011 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25781961,essv25783617 M 3017 0 2 ST6GALNAC5 nsv830292 1 77198159 77356895 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447284 M 95 0 1 MIR7156,PIGK,ST6GALNAC5 nsv478984 1 77207443 77207443 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018383 M 9 0 0 ST6GALNAC5 esv2762156 1 77244319 77250382 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005590 M 1109 0 1 ST6GALNAC5 RW_0018 dgv113e59 1 77248952 77249350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3374099,esv3349085 M 185 2 0 ST6GALNAC5 NA19239,NA19240 dgv114e59 1 77248983 77249331 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302890,esv3302578 M 185 44 0 ST6GALNAC5 NA10847,NA11830,NA11919,NA11992,NA11993,NA12045,NA12414,NA12489,NA12716,NA12828,NA18498,NA18502,NA18504,NA18505,NA18507,NA18510,NA18520,NA18523,NA18545,NA18552,NA18561,NA18570,NA18571,NA18576,NA18592,NA18593,NA18603,NA18856,NA18858,NA18870,NA18909,NA18940,NA18945,NA18949,NA18951,NA18959,NA19093,NA19102,NA19108,NA19137,NA19147,NA19172,NA19239,NA19240 esv2500895 1 77350217 77351182 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5317534 M 1 1 0 PIGK NA18507 esv3396636 1 77350491 77350510 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594913 M 185 1 0 PIGK NA12234 esv3307085 1 77350500 77350501 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7825286,essv7815201,essv7814592,essv7819589,essv7798828,essv7806165,essv7799449,essv7821307,essv7805271,essv7778491,essv7815678,essv7812601,essv7823298,essv7835402,essv7831944,essv7826139,essv7797174,essv7836381,essv7781472,essv7806757,essv7795174,essv7771453,essv7791527,essv7814045,essv7802692,essv7793203,essv7787871,essv7803222,essv7804600 M 185 29 0 PIGK NA07037,NA12045,NA12234,NA12249,NA12489,NA12761,NA12776,NA18489,NA18498,NA18499,NA18504,NA18508,NA18510,NA18516,NA18522,NA18558,NA18603,NA18638,NA18853,NA18856,NA18858,NA18870,NA19093,NA19108,NA19138,NA19147,NA19172,NA19190,NA19239 esv3322650 1 77350500 77350513 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899498,essv8899479,essv8899499,essv8899487,essv8899473,essv8899478,essv8899484,essv8899472,essv8899496,essv8899471,essv8899488,essv8899493,essv8899482,essv8899489,essv8899483,essv8899495,essv8899475,essv8899485,essv8899480,essv8899494,essv8899486,essv8899491,essv8899477,essv8899474,essv8899497,essv8899490,essv8899476 M 185 27 0 PIGK NA07037,NA12045,NA12249,NA12489,NA12761,NA12776,NA18489,NA18498,NA18499,NA18504,NA18508,NA18510,NA18516,NA18522,NA18558,NA18603,NA18638,NA18853,NA18856,NA18858,NA18870,NA19093,NA19108,NA19138,NA19147,NA19172,NA19190 esv3383521 1 77350506 77350518 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674097 M 185 1 0 PIGK NA19239 esv3308034 1 77350509 77350510 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838332 M 185 1 0 PIGK NA12891 nsv520629 1 77357434 77468442 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697526 M 2026 0 1 PIGK nsv946002 1 77367418 77372493 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771845,nssv1771915,nssv1771825,nssv1771887,nssv1771909,nssv1771911,nssv1771832,nssv1771898,nssv1771852,nssv1771897,nssv1771838,nssv1771913,nssv1771836,nssv1771910,nssv1771844,nssv1771876,nssv1771829,nssv1771874,nssv1771851,nssv1771868,nssv1771841,nssv1771892,nssv1771830,nssv1771823,nssv1771831,nssv1771885,nssv1771900,nssv1771862,nssv1771837,nssv1771884,nssv1771905,nssv1771893,nssv1771902,nssv1771883,nssv1771833,nssv1771869,nssv1771843,nssv1771878,nssv1771901,nssv1771850,nssv1771826,nssv1771867,nssv1771827,nssv1771917,nssv1771854,nssv1771914,nssv1771903,nssv1771919,nssv1771828,nssv1771871,nssv1771904,nssv1771895,nssv1771847,nssv1771918,nssv1771840,nssv1771888,nssv1771824,nssv1771894,nssv1771907,nssv1771856,nssv1771908,nssv1771880,nssv1771834,nssv1771916,nssv1771842,nssv1771858,nssv1771839,nssv1771896,nssv1771835,nssv1771877,nssv1771906,nssv1771864,nssv1771882,nssv1771912,nssv1771855,nssv1771865,nssv1771866,nssv1771879,nssv1771849,nssv1771853,nssv1771881,nssv1771873,nssv1771870,nssv1771863,nssv1771899,nssv1771886,nssv1771846,nssv1771861,nssv1771889,nssv1771857,nssv1771872,nssv1771875,nssv1771848,nssv1771859,nssv1771891,nssv1771890,nssv1771860 M 97 10 0 PIGK HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3306995 1 77406900 77406901 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7802680,essv7815357,essv7803049,essv7817342,essv7804735,essv7812536,essv7787372,essv7818351,essv7781326,essv7819468,essv7797125,essv7821101,essv7831884,essv7793268,essv7798759,essv7836374,essv7811269,essv7812284,essv7823283,essv7789717,essv7814563,essv7778606,essv7815862,essv7807011,essv7802083,essv7792138,essv7828338,essv7835577,essv7829774,essv7826067,essv7795216,essv7815000,essv7805558,essv7784258,essv7779606,essv7806348,essv7832622,essv7824968,essv7791346,essv7799670 M 185 40 0 PIGK NA07037,NA12045,NA12234,NA12249,NA12761,NA12776,NA18489,NA18499,NA18501,NA18502,NA18504,NA18505,NA18507,NA18508,NA18510,NA18517,NA18519,NA18522,NA18523,NA18558,NA18570,NA18603,NA18638,NA18853,NA18856,NA18858,NA18870,NA18871,NA18907,NA19093,NA19102,NA19108,NA19138,NA19143,NA19147,NA19172,NA19190,NA19210,NA19238,NA19239 esv3341686 1 77406905 77406924 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594935,essv9594924,essv9594946 M 185 3 0 PIGK NA12045,NA12234,NA19143 esv3322462 1 77406906 77406916 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899535,essv8899507,essv8899517,essv8899509,essv8899518,essv8899522,essv8899502,essv8899504,essv8899529,essv8899532,essv8899510,essv8899513,essv8899534,essv8899511,essv8899523,essv8899521,essv8899512,essv8899533,essv8899519,essv8899516,essv8899508,essv8899538,essv8899524,essv8899539,essv8899531,essv8899505,essv8899528,essv8899500,essv8899501,essv8899520,essv8899537,essv8899506,essv8899526,essv8899515,essv8899530,essv8899527 M 185 36 0 PIGK NA07037,NA12045,NA12249,NA12761,NA12776,NA18489,NA18499,NA18501,NA18502,NA18504,NA18505,NA18507,NA18508,NA18510,NA18517,NA18519,NA18522,NA18523,NA18558,NA18570,NA18603,NA18638,NA18853,NA18856,NA18858,NA18870,NA18871,NA18907,NA19093,NA19102,NA19108,NA19138,NA19147,NA19172,NA19190,NA19210 esv3309293 1 77406911 77406912 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838053,essv7838411,essv7837892 M 185 3 0 PIGK NA12878,NA12891,NA12892 esv3439343 1 77406911 77406918 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674100,essv8674099 M 185 2 0 PIGK NA19238,NA19239 nsv525188 1 77428239 77468442 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701266 M 2026 0 1 PIGK nsv517088 1 77547001 77551196 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv653765,nssv656535,nssv671217,nssv681619 M 2026 0 4 AK5 nsv818234 1 77547001 77551196 CNV loss Wang_et_al_2007 17921354 SNP array nssv1418348 M 112 0 1 AK5 NA19141 esv2762157 1 77547001 77552424 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005591 M 1109 0 1 AK5 RW_0116 nsv470719 1 77547001 78041795 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547739 M 443 1 0 AK5,FAM73A,USP33,ZZZ3 HGDP00468 nsv546591 1 77547001 78041795 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173031 M 17421 1 0 AK5,FAM73A,USP33,ZZZ3 HGDP00468 esv22538 1 77547332 77554042 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11859 M 40 0 1 AK5 NA18523 nsv441697 1 77547460 77552420 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656681,nssv1656679,nssv1656680,nssv1656678 M 270 0 4 AK5 NA18521,NA18523,NA18861,NA19141 esv2758945 1 77547602 77561050 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756848 M 270 0 2 AK5 NA18521,NA18861 nsv1522 1 77579422 77613896 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2983 M 9 1 0 AK5 NA18555 esv3893745 1 77582434 77623388 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25790001 M 3017 1 0 AK5 esv2764210 1 77598066 77610988 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005593,essv7005592 M 1109 0 2 AK5 RW_0100,RW_0221 nsv823254 1 77604106 77605088 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1425506 M 31 0 1 AK5 AK4 esv9520 1 77605023 77606390 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv31961 M 1 0 0 AK5 nsv521371 1 77672228 77685557 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697980 M 2026 0 1 AK5 nsv462095 1 77676199 77724048 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538348 M 1557 0 1 AK5 HGDP01164 nsv546592 1 77676199 77724048 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173032 M 17421 0 1 AK5 HGDP01164 esv1440178 1 77682551 77682615 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3855713 M 2 0 1 AK5 HuRef esv1179842 1 77713671 77713747 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3775628 M 2 0 1 AK5 HuRef nsv1533 1 77763092 77808867 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6692 M 9 0 1 AK5,ZZZ3 NA12156 esv3336566 1 77794304 77794323 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9594990 M 185 1 0 AK5 NA11931 nsv830303 1 77863412 78081353 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447296 M 95 0 1 FAM73A,USP33,ZZZ3 nsv946004 1 77924787 77932965 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771942,nssv1771142,nssv1771177,nssv1771189,nssv1771933,nssv1771945,nssv1771174,nssv1771164,nssv1771951,nssv1771950,nssv1771928,nssv1771159,nssv1771179,nssv1772887,nssv1771935,nssv1771184,nssv1771931,nssv1771145,nssv1771175,nssv1771156,nssv1771921,nssv1771183,nssv1771941,nssv1771943,nssv1771948,nssv1771167,nssv1771938,nssv1772888,nssv1771934,nssv1771160,nssv1771927,nssv1771149,nssv1771172,nssv1772880,nssv1771173,nssv1772889,nssv1771170,nssv1771150,nssv1771171,nssv1771147,nssv1771929,nssv1771157,nssv1771922,nssv1772877,nssv1771178,nssv1772878,nssv1771924,nssv1771143,nssv1771939,nssv1771188,nssv1771926,nssv1772884,nssv1771925,nssv1771920,nssv1771940,nssv1771181,nssv1771937,nssv1771186,nssv1771176,nssv1771187,nssv1771936,nssv1771141,nssv1771949,nssv1771180,nssv1771930,nssv1771158,nssv1771923,nssv1771947,nssv1771944,nssv1771163,nssv1771932,nssv1771148,nssv1771161,nssv1772886,nssv1772885,nssv1772882,nssv1771169,nssv1771154,nssv1771165,nssv1771168,nssv1771153,nssv1771151,nssv1771185,nssv1771152,nssv1771166,nssv1772891,nssv1772876,nssv1772879,nssv1771146,nssv1772883,nssv1772890,nssv1771162,nssv1771182,nssv1772881,nssv1771946,nssv1771155,nssv1771144 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508326 1 77956967 78006835 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618975 M 4 0 1 USP33 NA10860 nsv946005 1 78010296 78017314 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771275,nssv1771282,nssv1771270,nssv1771283,nssv1771203,nssv1771226,nssv1771211,nssv1771213,nssv1771221,nssv1771236,nssv1771192,nssv1771255,nssv1771271,nssv1771263,nssv1771267,nssv1771279,nssv1771197,nssv1771230,nssv1771208,nssv1771229,nssv1771274,nssv1771252,nssv1771202,nssv1771256,nssv1771200,nssv1771237,nssv1771269,nssv1771264,nssv1771205,nssv1771261,nssv1771272,nssv1771242,nssv1771214,nssv1771217,nssv1771219,nssv1771280,nssv1771196,nssv1771257,nssv1771210,nssv1771243,nssv1771193,nssv1771225,nssv1771198,nssv1771227,nssv1771268,nssv1771253,nssv1771276,nssv1771239,nssv1771194,nssv1771232,nssv1771201,nssv1771228,nssv1771207,nssv1771190,nssv1771195,nssv1771266,nssv1771199,nssv1771216,nssv1771218,nssv1771254,nssv1771212,nssv1771231,nssv1771206,nssv1771244,nssv1771191,nssv1771246,nssv1771209,nssv1771223,nssv1771273,nssv1771240,nssv1771204,nssv1771235,nssv1771222,nssv1771247,nssv1771245,nssv1771265,nssv1771285,nssv1771233,nssv1771278,nssv1771238,nssv1771260,nssv1771286,nssv1771215,nssv1771248,nssv1771251,nssv1771258,nssv1771262,nssv1771220,nssv1771234,nssv1771284,nssv1771250,nssv1771281,nssv1771277,nssv1771241,nssv1771224,nssv1771249,nssv1771259 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946006 1 78048403 78050989 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771307,nssv1772280,nssv1771298,nssv1772270,nssv1772292,nssv1772301,nssv1771308,nssv1772285,nssv1772294,nssv1771314,nssv1772288,nssv1772273,nssv1771296,nssv1772275,nssv1771318,nssv1771328,nssv1772293,nssv1772271,nssv1771305,nssv1771329,nssv1772291,nssv1772306,nssv1771299,nssv1771332,nssv1771302,nssv1771335,nssv1771297,nssv1771317,nssv1771294,nssv1771331,nssv1771311,nssv1772299,nssv1771290,nssv1772303,nssv1771291,nssv1771327,nssv1772290,nssv1771312,nssv1771295,nssv1772282,nssv1772289,nssv1772277,nssv1771293,nssv1772286,nssv1772297,nssv1772304,nssv1771304,nssv1771333,nssv1771301,nssv1772305,nssv1772295,nssv1772287,nssv1771315,nssv1771330,nssv1771292,nssv1772276,nssv1772296,nssv1772283,nssv1771288,nssv1771310,nssv1771289,nssv1772278,nssv1771303,nssv1772281,nssv1771306,nssv1772307,nssv1771316,nssv1772284,nssv1771309,nssv1771323,nssv1771300,nssv1771321,nssv1772298,nssv1772302,nssv1771324,nssv1772262,nssv1772266,nssv1771334,nssv1772272,nssv1772274,nssv1772267,nssv1772260,nssv1772265,nssv1772300,nssv1771313,nssv1771322,nssv1772279,nssv1771319,nssv1771320,nssv1772263,nssv1772264,nssv1771325,nssv1771326,nssv1771287,nssv1772268,nssv1772269,nssv1772261 M 97 10 0 FAM73A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947433 1 78083432 78098324 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764154 M 97 1 0 FAM73A HGDP00998 nsv946007 1 78086106 78087069 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772391,nssv1772349,nssv1772309,nssv1772353,nssv1772392,nssv1772355,nssv1772326,nssv1772366,nssv1772330,nssv1772377,nssv1772339,nssv1772308,nssv1772316,nssv1772360,nssv1772320,nssv1772342,nssv1772319,nssv1772335,nssv1772317,nssv1772333,nssv1772318,nssv1772356,nssv1772323,nssv1772331,nssv1772390,nssv1772348,nssv1772315,nssv1772395,nssv1772321,nssv1772358,nssv1772329,nssv1772370,nssv1772388,nssv1772382,nssv1772393,nssv1772372,nssv1772310,nssv1772365,nssv1772336,nssv1772368,nssv1772385,nssv1772398,nssv1772387,nssv1772403,nssv1772386,nssv1772340,nssv1772312,nssv1772374,nssv1772322,nssv1772361,nssv1772389,nssv1772399,nssv1772313,nssv1772346,nssv1772325,nssv1772375,nssv1772337,nssv1772400,nssv1772311,nssv1772373,nssv1772332,nssv1772354,nssv1772394,nssv1772380,nssv1772327,nssv1772401,nssv1772324,nssv1772338,nssv1772328,nssv1772352,nssv1772314,nssv1772383,nssv1772379,nssv1772344,nssv1772378,nssv1772347,nssv1772402,nssv1772350,nssv1772384,nssv1772341,nssv1772381,nssv1772404,nssv1772362,nssv1772363,nssv1772396,nssv1772359,nssv1772334,nssv1772357,nssv1772351,nssv1772369,nssv1772345,nssv1772367,nssv1772397,nssv1772343,nssv1772364,nssv1772376,nssv1772371 M 97 10 0 FAM73A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2329300 1 78126023 78126440 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4613924 M 1 0 1 NEXN-AS1 NA18507 nsv518855 1 78189257 78228943 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694281 M 2026 0 1 FUBP1 esv1010689 1 78299892 78300007 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575542 M 3 0 1 GIPC2 HuRef esv1368582 1 78299900 78300016 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4047242 M 2 0 1 GIPC2 HuRef nsv159417 1 78351625 78351803 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177995 M 24 GIPC2 esv3307684 1 78379641 78379642 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7803106,essv7793776,essv7789028,essv7794731,essv7776224,essv7770421,essv7777369,essv7829241,essv7808891,essv7792493,essv7802553,essv7815616,essv7773564,essv7817040,essv7827218,essv7808450,essv7787395,essv7826937,essv7809306,essv7798368,essv7830593,essv7790017,essv7799497,essv7807581,essv7818147,essv7784632,essv7831214,essv7819624,essv7832785,essv7782617,essv7835929,essv7806312,essv7830381,essv7816743,essv7829009,essv7813704,essv7786035,essv7796116,essv7830153,essv7794603,essv7786790,essv7822230,essv7805990,essv7780275,essv7779070,essv7807814,essv7810298,essv7787235,essv7814470,essv7782968,essv7781802,essv7820174,essv7776964,essv7772775,essv7815750,essv7803353,essv7810416,essv7824514,essv7831439,essv7821206,essv7822587,essv7774904,essv7786368,essv7796639,essv7783336,essv7823395,essv7791614,essv7796881 M 185 68 0 "" NA07037,NA07346,NA07357,NA11918,NA11920,NA11931,NA12044,NA12045,NA12249,NA12287,NA12750,NA12763,NA12828,NA12873,NA12878,NA12891,NA18504,NA18523,NA18526,NA18537,NA18542,NA18545,NA18550,NA18552,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18592,NA18593,NA18603,NA18605,NA18609,NA18638,NA18870,NA18909,NA18916,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18959,NA18961,NA18964,NA18965,NA18969,NA18973,NA18980,NA19099,NA19108,NA19190,NA19239,NA19240,NA19257 esv3403527 1 78379643 78379654 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899577,essv8899632,essv8899598,essv8899594,essv8899589,essv8899586,essv8899608,essv8899613,essv8899595,essv8899593,essv8899597,essv8899604,essv8899628,essv8899579,essv8899610,essv8899601,essv8899568,essv8899591,essv8899624,essv8899605,essv8899609,essv8899599,essv8899580,essv8899629,essv8899622,essv8899576,essv8899621,essv8899574,essv8899627,essv8899615,essv8899596,essv8899573,essv8899588,essv8899583,essv8899616,essv8899569,essv8899630,essv8899606,essv8899585,essv8899619,essv8899602,essv8899618,essv8899582,essv8899620,essv8899578,essv8899607,essv8899633,essv8899567,essv8899590,essv8899600,essv8899612,essv8899611,essv8899575,essv8899571,essv8899623,essv8899617,essv8899631,essv8899572,essv8899584,essv8899626,essv8899587 M 185 61 0 "" NA07037,NA07346,NA07357,NA11918,NA11920,NA12044,NA12045,NA12249,NA12287,NA12750,NA12763,NA12828,NA18504,NA18523,NA18526,NA18537,NA18542,NA18545,NA18550,NA18552,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18592,NA18593,NA18603,NA18605,NA18609,NA18638,NA18870,NA18909,NA18916,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18959,NA18961,NA18964,NA18965,NA18973,NA18980,NA19099,NA19108,NA19190,NA19257 esv3309575 1 78379647 78379648 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840574,essv7843088,essv7840002,essv7841604 M 185 4 0 "" NA12878,NA12891,NA19239,NA19240 esv3412003 1 78379654 78379658 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674104,essv8674107,essv8674105,essv8674106 M 185 4 0 "" NA12878,NA12891,NA19239,NA19240 nsv1000388 1 78411534 78437873 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479178,nssv3478519 M 29084 0 2 "" nsv520237 1 78411832 78432711 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv662070,nssv673864 M 2026 0 2 "" nsv546593 1 78418289 78424047 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717554,nssv717551,nssv717552,nssv717553 M 17421 0 4 "" nsv1544 1 78421079 78433560 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4351 M 9 0 1 "" NA12878 esv28303 1 78421767 78424207 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17203 M 40 0 8 "" NA12828,NA12878,NA18502,NA18508,NA18511,NA18858,NA19099,NA19114 nsv819341 1 78421855 78432177 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418594 M 2 0 1 "" AK1 nsv823265 1 78422267 78424372 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1425508 M 31 0 1 "" AK4 dgv328n54 1 78422450 78424047 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546607,nsv546609,nsv546610,nsv546602,nsv546601,nsv546595,nsv546594,nsv546603,nsv546606,nsv546597,nsv546596 M 17421 0 134 "" dgv329n54 1 78422450 78432711 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546598,nsv546605,nsv546611,nsv546599,nsv546604 M 17421 0 8 "" nsv546600 1 78422450 78439578 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717637 M 17421 0 1 "" nsv513992 1 78422464 78423912 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2864940,nssv2860427,nssv2866929,nssv2863190,nssv2858656,nssv2865276,nssv2859769,nssv2865984,nssv2860148,nssv2859770,nssv2861215,nssv2865605,nssv2864884,nssv2864959,nssv2863864,nssv2860475,nssv2865582,nssv2860202,nssv2861691,nssv2858728,nssv2861182,nssv2863397,nssv2865789,nssv2859511,nssv2866310,nssv2860185,nssv2862624,nssv2859573,nssv2859592,nssv2864718,nssv2866585,nssv2860999,nssv2861674,nssv2864108,nssv2868208,nssv2861072,nssv2866682,nssv2859796,nssv2864770,nssv2862550,nssv2860779,nssv2866644,nssv2860902,nssv2860086,nssv2867018,nssv2860306,nssv2864867,nssv2867456,nssv2861144,nssv2862579,nssv2867065,nssv2864524,nssv2863795,nssv2867277,nssv2861904,nssv2868049,nssv2858862,nssv2862321,nssv2864620,nssv2867281,nssv2864153,nssv2865741,nssv2864202,nssv2867660,nssv2861918,nssv2865632,nssv2858732,nssv2860591,nssv2858582,nssv2861470,nssv2868264,nssv2866034,nssv2861901,nssv2861067,nssv2858899,nssv2860889,nssv2862829,nssv2861710,nssv2863940,nssv2859285,nssv2861809,nssv2863658,nssv2866229,nssv2867530,nssv2862991,nssv2866484,nssv2862369,nssv2863841,nssv2863676,nssv2860061,nssv2868033,nssv2867409,nssv2864012,nssv2863202,nssv2865019 M 2366 0 95 "" NA06986,NA07055,NA10835,NA10836,NA10837,NA10845,NA10847,NA10852,NA11843,NA11893,NA11918,NA11920,NA11930,NA12146,NA12248,NA12273,NA12274,NA12335,NA12341,NA12347,NA12375,NA12763,NA12817,NA12828,NA12875,NA12878,NA12892,NA18485,NA18487,NA18500,NA18508,NA18509,NA18511,NA18518,NA18522,NA18860,NA18874,NA18875,NA18908,NA18917,NA19099,NA19100,NA19101,NA19114,NA19122,NA19123,NA19130,NA19131,NA19138,NA19143,NA19144,NA19145,NA19146,NA19148,NA19149,NA19160,NA19171,NA19172,NA19182,NA19184,NA19185,NA19186,NA19201,NA19202,NA19204,NA19206,NA19221,NA19223,NA19236,NA19237,NA21310,NA21313,NA21317,NA21362,NA21363,NA21388,NA21423,NA21425,NA21438,NA21475,NA21476,NA21488,NA21489,NA21490,NA21512,NA21513,NA21514,NA21523,NA21580,NA21600,NA21601,NA21608,NA21615,NA21634,NA21648 nsv546608 1 78422759 78423752 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717695 M 17421 0 1 "" dgv330n54 1 78422943 78424047 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546618,nsv546616,nsv546612,nsv546617,nsv546614,nsv546613,nsv546615 M 17421 0 34 "" esv2763564 1 78500488 78520128 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032245 M 1109 0 1 MGC27382 SW_0338 esv2762158 1 78506829 78520128 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005594 M 1109 0 1 MGC27382 RW_0229 nsv946008 1 78530559 78535524 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772482,nssv1772441,nssv1772425,nssv1772464,nssv1772491,nssv1772474,nssv1772416,nssv1772461,nssv1772485,nssv1772438,nssv1772434,nssv1772459,nssv1772427,nssv1772466,nssv1772436,nssv1772478,nssv1772429,nssv1772463,nssv1772489,nssv1772435,nssv1772414,nssv1772430,nssv1772406,nssv1772458,nssv1772423,nssv1772437,nssv1772412,nssv1772494,nssv1772490,nssv1772432,nssv1772426,nssv1772448,nssv1772486,nssv1772468,nssv1772407,nssv1772473,nssv1772433,nssv1772496,nssv1772413,nssv1772501,nssv1772484,nssv1772457,nssv1772418,nssv1772495,nssv1772483,nssv1772428,nssv1772409,nssv1772440,nssv1772417,nssv1772479,nssv1772415,nssv1772450,nssv1772487,nssv1772439,nssv1772410,nssv1772454,nssv1772488,nssv1772445,nssv1772411,nssv1772446,nssv1772420,nssv1772453,nssv1772422,nssv1772452,nssv1772419,nssv1772469,nssv1772408,nssv1772471,nssv1772421,nssv1772460,nssv1772424,nssv1772497,nssv1772443,nssv1772451,nssv1772467,nssv1772465,nssv1772455,nssv1772472,nssv1772449,nssv1772492,nssv1772470,nssv1772480,nssv1772476,nssv1772500,nssv1772447,nssv1772431,nssv1772405,nssv1772481,nssv1772462,nssv1772498,nssv1772442,nssv1772499,nssv1772475,nssv1772444,nssv1772477,nssv1772493,nssv1772456 M 97 10 0 MGC27382 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2763565 1 78547211 78581646 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032256 M 1109 0 1 MGC27382 SW_0786 nsv1011898 1 78547211 78588387 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699590 M 29084 0 1 MGC27382 nsv946009 1 78548084 78555526 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772513,nssv1772553,nssv1772508,nssv1772541,nssv1772515,nssv1772554,nssv1772522,nssv1771464,nssv1772514,nssv1772567,nssv1772512,nssv1771462,nssv1771453,nssv1771459,nssv1771452,nssv1772528,nssv1772531,nssv1772549,nssv1772524,nssv1771463,nssv1771448,nssv1772561,nssv1772510,nssv1773497,nssv1772533,nssv1771461,nssv1772520,nssv1772546,nssv1772505,nssv1772535,nssv1772509,nssv1773500,nssv1773503,nssv1771457,nssv1772526,nssv1772534,nssv1771450,nssv1772556,nssv1772523,nssv1772560,nssv1772503,nssv1773501,nssv1772504,nssv1772557,nssv1772530,nssv1772545,nssv1771449,nssv1772525,nssv1771454,nssv1772563,nssv1772511,nssv1772529,nssv1772506,nssv1772539,nssv1773504,nssv1772537,nssv1773505,nssv1772532,nssv1772507,nssv1772558,nssv1771451,nssv1772538,nssv1772519,nssv1771455,nssv1772521,nssv1772555,nssv1772518,nssv1772565,nssv1772517,nssv1771456,nssv1772516,nssv1771460,nssv1773499,nssv1772544,nssv1772527,nssv1771458,nssv1772536,nssv1772550,nssv1772551,nssv1773494,nssv1772542,nssv1773493,nssv1772566,nssv1772548,nssv1773498,nssv1773492,nssv1773495,nssv1772552,nssv1772564,nssv1772562,nssv1773502,nssv1772559,nssv1772543,nssv1773496,nssv1772502,nssv1772547,nssv1772540 M 97 10 0 MGC27382 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1555 1 78567553 78578876 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9519 M 9 1 0 MGC27382 NA18507 esv23037 1 78606682 78608443 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9802 M 40 0 2 MGC27382 NA18916,NA19225 nsv472847 1 78712158 78712158 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012695 M 9 1 0 "" NA18555 esv1005505 1 78714819 78714819 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583692 M 3 1 0 "" HuRef esv1654262 1 78714820 78714820 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3961681 M 2 1 0 "" HuRef esv3310507 1 78714820 78714820 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843610,essv7843626,essv7843584 M 185 3 0 "" NA12878,NA12891,NA12892 esv3353723 1 78714820 78714820 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701372 M 185 1 0 "" NA12878 nsv1566 1 78725133 78733416 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5669 M 9 1 0 PTGFR NA19129 esv2376136 1 78770538 78770905 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4984931 M 1 0 1 PTGFR NA18507 esv1614956 1 78770744 78770806 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4251489 M 2 0 1 PTGFR HuRef nsv830315 1 78781031 78973179 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447329,nssv1447307,nssv1447318,nssv1447340 M 95 4 0 IFI44,IFI44L nsv1577 1 78785899 78831163 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5680 M 9 0 1 "" NA19129 esv3332587 1 78797057 78797069 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863718,essv7863717 M 185 2 0 "" NA12005,NA18871 nsv1001291 1 78837232 79923137 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465616 M 29084 0 1 ELTD1,IFI44,IFI44L esv3386975 1 78881407 78881426 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595035 M 185 1 0 IFI44L NA12287 esv3303563 1 78881419 78881420 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7783733,essv7800865,essv7803162,essv7807635,essv7799939,essv7821178,essv7777352,essv7787229,essv7774314,essv7815160,essv7783498,essv7789882,essv7777098,essv7774753,essv7786804,essv7770192,essv7808983,essv7780093,essv7823836,essv7775518,essv7770874 M 185 21 0 IFI44L NA07037,NA11881,NA11918,NA12004,NA12006,NA12287,NA12776,NA12815,NA12878,NA12891,NA12892,NA18537,NA18542,NA18555,NA18558,NA18561,NA18566,NA18582,NA18959,NA18961,NA18980 esv3406252 1 78881420 78881432 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899640,essv8899634,essv8899646,essv8899638,essv8899643,essv8899635,essv8899639,essv8899649,essv8899651,essv8899644,essv8899637,essv8899645,essv8899642,essv8899641,essv8899650,essv8899648 M 185 16 0 IFI44L NA07037,NA11881,NA11918,NA12004,NA12006,NA12776,NA18537,NA18542,NA18555,NA18558,NA18561,NA18566,NA18582,NA18959,NA18961,NA18980 esv3309841 1 78881425 78881426 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836805 M 185 1 0 IFI44L NA19239 esv3431836 1 78881426 78881434 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674111,essv8674110,essv8674108 M 185 3 0 IFI44L NA12878,NA12891,NA12892 esv3349119 1 78938779 78938797 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863719 M 185 1 0 "" NA12005 nsv526221 1 78970212 79259668 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702486 M 2026 0 1 ELTD1 nsv477916 1 78997259 78997259 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017305 M 9 1 0 "" NA18517 nsv546619 1 79006081 79387577 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717733 M 17421 0 1 ELTD1 dgv201n100 1 79076338 79117518 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000656,nsv1003295 M 29084 0 2 "" nsv998900 1 79092221 79118647 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466210,nssv3472447 M 29084 1 1 "" nsv1010441 1 79092887 79327903 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470144 M 29084 0 1 ELTD1 dgv331n54 1 79131415 79193079 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546620,nsv546622 M 17421 0 2 ELTD1 nsv546621 1 79131415 79230935 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717735 M 17421 0 1 ELTD1 nsv546623 1 79147167 79281697 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717737 M 17421 0 1 ELTD1 dgv332n54 1 79154597 79193079 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546624,nsv546626,nsv546625 M 17421 0 5 ELTD1 esv21924 1 79166231 79170324 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18381,esv10447 M 40 0 3 ELTD1 NA18907,NA18909,NA19108 esv9047 1 79173855 79174681 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31488 M 1 0 0 ELTD1 esv2551231 1 79173924 79175231 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5330250 M 1 0 1 ELTD1 NA18507 esv2156352 1 79173925 79174619 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4757073 M 1 0 1 ELTD1 NA18507 esv4207 1 79174011 79174513 CNV loss Wang_et_al_2008 18987735 Sequencing essv26648 M 1 0 1 ELTD1 YH esv1001130 1 79174098 79174419 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568205 M 3 0 1 ELTD1 HuRef dgv333n54 1 79175923 79230935 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546628,nsv546627 M 17421 0 2 ELTD1 nsv528328 1 79184352 79184996 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704910 M 2026 0 1 ELTD1 nsv470720 1 79184352 79263794 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547740 M 443 0 1 ELTD1 HGDP01061 nsv462139 1 79244547 79292015 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538380 M 1557 0 1 ELTD1 1782681195_A nsv546629 1 79244547 79292015 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173033 M 17421 0 1 ELTD1 1782681195_A nsv522014 1 79256875 79257304 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694783 M 2026 0 1 "" nsv546630 1 79278998 79330392 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717745 M 17421 0 1 "" esv34074 1 79286032 79358240 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990709 M 270 0 0 "" nsv546631 1 79291398 79387577 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717746 M 17421 0 1 "" nsv946010 1 79291923 79294275 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771493,nssv1771514,nssv1771478,nssv1771512,nssv1771479,nssv1771497,nssv1771542,nssv1771529,nssv1771487,nssv1771523,nssv1771476,nssv1771498,nssv1771472,nssv1771500,nssv1771475,nssv1771553,nssv1771483,nssv1771527,nssv1771494,nssv1771555,nssv1771547,nssv1771517,nssv1771473,nssv1771561,nssv1771486,nssv1771515,nssv1771467,nssv1771559,nssv1771543,nssv1771524,nssv1771477,nssv1771495,nssv1771489,nssv1771465,nssv1771469,nssv1771521,nssv1771480,nssv1771519,nssv1771485,nssv1771556,nssv1771474,nssv1771526,nssv1771496,nssv1771525,nssv1771545,nssv1771537,nssv1771549,nssv1771534,nssv1771470,nssv1771558,nssv1771471,nssv1771540,nssv1771482,nssv1771492,nssv1771551,nssv1771504,nssv1771468,nssv1771533,nssv1771546,nssv1771511,nssv1771484,nssv1771503,nssv1771481,nssv1771560,nssv1771550,nssv1771502,nssv1771548,nssv1771557,nssv1771466,nssv1771488,nssv1771544,nssv1771513,nssv1771541,nssv1771516,nssv1771499,nssv1771530,nssv1771554,nssv1771531,nssv1771532,nssv1771552,nssv1771507,nssv1771538,nssv1771490,nssv1771509,nssv1771522,nssv1771528,nssv1771501,nssv1771508,nssv1771510,nssv1771518,nssv1771506,nssv1771536,nssv1771491,nssv1771520,nssv1771539,nssv1771505,nssv1771535 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546632 1 79306726 79366745 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717747 M 17421 0 1 "" dgv202n100 1 79313545 79394290 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009913,nsv1007013,nsv1005743 M 29084 0 3 "" esv2451306 1 79327526 79328862 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5312727 M 1 0 1 "" NA18507 nsv830326 1 79345967 79508255 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447351 M 95 1 0 "" esv2593633 1 79354276 79355213 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5346379 M 1 1 0 "" NA18507 esv1600149 1 79354670 79354670 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3769417 M 2 1 0 "" HuRef nsv818245 1 79405655 79409914 CNV loss Wang_et_al_2007 17921354 SNP array nssv1418129,nssv1418128 M 112 0 2 "" NA19143,NA19144 dgv124e59 1 79422732 79422870 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302670,esv3303049 M 185 48 0 "" NA07346,NA11831,NA11881,NA11894,NA11931,NA11995,NA12004,NA12287,NA12414,NA12489,NA12717,NA12828,NA12878,NA12891,NA12892,NA18501,NA18502,NA18508,NA18526,NA18542,NA18558,NA18563,NA18566,NA18571,NA18577,NA18579,NA18582,NA18592,NA18608,NA18609,NA18638,NA18870,NA18916,NA18942,NA18945,NA18947,NA18952,NA18956,NA18964,NA18965,NA19005,NA19093,NA19129,NA19138,NA19225,NA19238,NA19239,NA19240 esv3357743 1 79422737 79422863 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670915,essv8670911,essv8670913,essv8670914,essv8670912,essv8670910 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv8960 1 79528670 79528840 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31401 M 1 0 0 "" esv2586442 1 79554114 79556795 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5352773 M 1 0 1 "" NA18507 nsv1588 1 79558188 79592305 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1215 M 9 1 0 "" NA19240 nsv830337 1 79564467 79685829 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447362 M 95 1 0 "" nsv546633 1 79567307 79649623 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717748 M 17421 1 0 "" dgv21n27 1 79607654 79649623 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv462150,nsv462173,nsv462161 M 1557 0 3 "" HGDP00461,HGDP00472,HGDP00479 dgv334n54 1 79607654 79649623 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546635,nsv546634 M 17421 0 4 "" HGDP00448,HGDP00461,HGDP00472,HGDP00479 nsv470721 1 79607654 79649623 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547747,nssv547743,nssv547744,nssv547746,nssv547742,nssv547741 M 443 0 6 "" HGDP00448,HGDP00453,HGDP00461,HGDP00472,HGDP00479,HGDP01086 nsv1599 1 79694791 79722938 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4361 M 9 1 0 "" NA12878 nsv1005022 1 79723362 79879490 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472411 M 29084 1 0 "" nsv546636 1 79737411 79852584 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717749 M 17421 0 1 "" esv2460745 1 79744283 79745677 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5233490 M 1 0 1 "" NA18507 nsv546637 1 79757336 79932557 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717750 M 17421 0 1 "" nsv946011 1 79759479 79762228 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1771574,nssv1771602,nssv1772572,nssv1772580,nssv1771591,nssv1771624,nssv1771590,nssv1772579,nssv1771583,nssv1771619,nssv1771575,nssv1772573,nssv1771643,nssv1771585,nssv1771573,nssv1772582,nssv1771580,nssv1771597,nssv1771570,nssv1771599,nssv1771569,nssv1771617,nssv1771564,nssv1771636,nssv1771641,nssv1771605,nssv1771572,nssv1771625,nssv1771639,nssv1771620,nssv1771640,nssv1771633,nssv1771566,nssv1772575,nssv1771582,nssv1771626,nssv1771586,nssv1771611,nssv1771565,nssv1771598,nssv1772571,nssv1771632,nssv1771584,nssv1771594,nssv1771567,nssv1771621,nssv1772569,nssv1772578,nssv1771577,nssv1772577,nssv1771579,nssv1771614,nssv1771642,nssv1771616,nssv1771581,nssv1771630,nssv1771578,nssv1771612,nssv1771576,nssv1771618,nssv1772568,nssv1772576,nssv1771568,nssv1771608,nssv1771593,nssv1771609,nssv1771571,nssv1771600,nssv1771563,nssv1771592,nssv1772570,nssv1771623,nssv1771562,nssv1771595,nssv1771637,nssv1771610,nssv1771589,nssv1771631,nssv1771628,nssv1771634,nssv1771601,nssv1771622,nssv1771613,nssv1771629,nssv1771635,nssv1771603,nssv1771588,nssv1771606,nssv1772581,nssv1771587,nssv1771627,nssv1771638,nssv1771615,nssv1772574,nssv1771596,nssv1771604,nssv1771607 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508337 1 79800567 79805048 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622768 M 4 0 1 "" NA18994 esv2114150 1 79809484 79809888 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4604602 M 1 0 1 "" NA18507 esv2750840 1 79841670 81616474 CNV loss Pinto_et_al_2007 17911159 SNP array essv6987853,essv6987852,essv6989199,essv6980803,essv6980804 M 771 0 5 "" BEC_175 nsv159019 1 79866149 79873901 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177597 M 24 "" esv2009346 1 79886581 79887277 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4862067 M 1 0 1 "" NA18507 esv3566 1 79886680 79887133 CNV loss Wang_et_al_2008 18987735 Sequencing essv26007 M 1 0 1 "" YH nsv546638 1 79904582 80126384 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717751 M 17421 0 1 "" nsv546639 1 79925187 79950535 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717752 M 17421 0 1 "" esv3893756 1 79931809 80017340 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780403 M 3017 0 1 "" nsv546640 1 79968826 80095173 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717753,nssv717754 M 17421 0 2 "" dgv203n100 1 79983286 80304721 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011192,nsv1002522 M 29084 0 2 "" esv23928 1 79992526 79995969 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11006,esv15070,esv10473 M 40 22 4 "" NA07037,NA11894,NA11993,NA12004,NA12414,NA12828,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv821482 1 79993560 79995969 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420403 M 1 0 1 "" NA10851 esv2520659 1 79993633 79996331 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5208274 M 1 0 1 "" NA18507 nsv511158 1 79993655 79998425 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626088 M 1 0 1 "" 1 nsv511700 1 79994274 79995881 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626340 M 1 0 1 "" 1 esv1505227 1 79994370 79995618 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4234788 M 2 0 1 "" HuRef esv1005433 1 79994370 79996012 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563497 M 3 0 1 "" HuRef nsv160393 1 79994371 79995618 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178971 M 24 "" nsv546641 1 79994456 79995166 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv717756,nssv717755 M 17421 0 2 "" dgv335n54 1 79994456 79995483 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546644,nsv546643,nsv546642 M 17421 0 567 "" nsv823276 1 80017603 80018243 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1439466 M 31 1 0 "" NA18537 esv3302489 1 80043736 80043803 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7730888,essv7731482,essv7731243,essv7731616 M 185 4 0 "" NA12878,NA19238,NA19239,NA19240 esv999819 1 80043743 80043743 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3567514 M 3 1 0 "" HuRef esv1201403 1 80043744 80043744 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4139564 M 2 1 0 "" HuRef esv3310539 1 80043745 80043745 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843397 M 185 1 0 "" NA12878 nsv160493 1 80043745 80043745 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179071 M 24 "" esv3442200 1 80043746 80043746 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701373 M 185 1 0 "" NA12878 esv3419958 1 80043746 80043811 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670919,essv8670916,essv8670917,essv8670920 M 185 4 0 "" NA12878,NA19238,NA19239,NA19240 nsv823287 1 80061326 80061850 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431817 M 31 1 0 "" AK20 nsv462184 1 80070538 80504156 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538407 M 1557 1 0 "" HGDP01308 nsv546645 1 80070538 80504156 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173038 M 17421 1 0 "" HGDP01308 nsv823298 1 80071288 80072673 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437948 M 31 1 0 "" NA18951 esv1217028 1 80071684 80071684 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4029994 M 2 1 0 "" HuRef esv34144 1 80093606 80345333 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990651 M 270 0 0 "" nsv1001905 1 80183051 80231918 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463185 M 29084 1 0 "" dgv336n54 1 80228322 80329403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546647,nsv546646 M 17421 0 2 "" dgv337n54 1 80256562 80329403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546648,nsv546649 M 17421 0 2 "" 1787431198_A nsv462195 1 80256562 80329403 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538416 M 1557 0 1 "" 1787431198_A nsv1012630 1 80268982 80533785 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473416 M 29084 0 1 "" dgv338n54 1 80281442 80320023 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546651,nsv546650 M 17421 0 2 "" dgv339n54 1 80287294 80335888 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546654,nsv546652,nsv546655 M 17421 0 4 "" nsv546653 1 80293967 80320023 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718332,nssv718330,nssv718331,nssv718333,nssv718334,nssv718336,nssv718335 M 17421 0 7 "" nsv462206 1 80305026 80329403 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538426 M 1557 0 1 "" HGDP00241 nsv546656 1 80305026 80329403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173040 M 17421 0 1 "" HGDP00241 dgv340n54 1 80308076 80414113 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546659,nsv546657 M 17421 0 3 "" nsv462217 1 80309386 80456194 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538434 M 1557 0 1 "" 1780854449_A dgv341n54 1 80309386 80504156 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546660,nsv546658 M 17421 0 2 "" 1780854449_A nsv462261 1 80310777 80361254 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538471 M 1557 0 1 "" 1780862014_A nsv520795 1 80314666 80329403 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697615 M 2026 0 1 "" esv1005034 1 80317844 80317844 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570928 M 3 1 0 "" HuRef esv1023572 1 80317845 80317845 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3824088 M 2 1 0 "" HuRef esv2763567 1 80328252 80369487 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032267 M 1109 1 0 "" SW_1322 nsv946012 1 80328650 80330496 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772666,nssv1772654,nssv1772665,nssv1772677,nssv1772607,nssv1772643,nssv1772668,nssv1772621,nssv1772586,nssv1772620,nssv1772612,nssv1772652,nssv1772667,nssv1772583,nssv1772587,nssv1772624,nssv1772605,nssv1772674,nssv1772614,nssv1772679,nssv1772585,nssv1772648,nssv1772660,nssv1772625,nssv1772661,nssv1772634,nssv1772589,nssv1772638,nssv1772594,nssv1772678,nssv1772603,nssv1772629,nssv1772601,nssv1772642,nssv1772591,nssv1772630,nssv1772590,nssv1772622,nssv1772604,nssv1772609,nssv1772663,nssv1772653,nssv1772593,nssv1772627,nssv1772662,nssv1772626,nssv1772664,nssv1772637,nssv1772611,nssv1772615,nssv1772595,nssv1772672,nssv1772596,nssv1772641,nssv1772669,nssv1772656,nssv1772597,nssv1772644,nssv1772598,nssv1772606,nssv1772588,nssv1772613,nssv1772592,nssv1772618,nssv1772584,nssv1772671,nssv1772600,nssv1772639,nssv1772602,nssv1772646,nssv1772599,nssv1772657,nssv1772651,nssv1772670,nssv1772616,nssv1772610,nssv1772619,nssv1772636,nssv1772608,nssv1772635,nssv1772633,nssv1772676,nssv1772655,nssv1772617,nssv1772640,nssv1772675,nssv1772658,nssv1772659,nssv1772632,nssv1772623,nssv1772647,nssv1772649,nssv1772650,nssv1772673,nssv1772628,nssv1772631,nssv1772645 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv519190 1 80329403 80335888 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696673 M 2026 0 1 "" nsv528189 1 80385803 80403819 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704746 M 2026 0 1 "" nsv1610 1 80389617 80421976 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10061 M 9 1 0 "" NA18956 nsv546661 1 80428702 80929437 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718344 M 17421 1 0 "" nsv946013 1 80521545 80522045 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772704,nssv1772728,nssv1772763,nssv1772772,nssv1772702,nssv1772714,nssv1772683,nssv1772742,nssv1772694,nssv1772716,nssv1772693,nssv1772770,nssv1772695,nssv1772750,nssv1772766,nssv1772768,nssv1772688,nssv1772740,nssv1772698,nssv1772729,nssv1772757,nssv1772773,nssv1772762,nssv1772720,nssv1772687,nssv1772744,nssv1772692,nssv1772732,nssv1772700,nssv1772680,nssv1772709,nssv1772752,nssv1772689,nssv1772718,nssv1772691,nssv1772776,nssv1772690,nssv1772739,nssv1772682,nssv1772755,nssv1772701,nssv1772730,nssv1772711,nssv1772751,nssv1772760,nssv1772756,nssv1772758,nssv1772771,nssv1772761,nssv1772738,nssv1772684,nssv1772721,nssv1772708,nssv1772749,nssv1772685,nssv1772722,nssv1772764,nssv1772767,nssv1772697,nssv1772725,nssv1772686,nssv1772731,nssv1772681,nssv1772774,nssv1772765,nssv1772712,nssv1772696,nssv1772745,nssv1772699,nssv1772775,nssv1772759,nssv1772769,nssv1772727,nssv1772753,nssv1772741,nssv1772736,nssv1772719,nssv1772737,nssv1772706,nssv1772726,nssv1772735,nssv1772710,nssv1772724,nssv1772734,nssv1772723,nssv1772743,nssv1772707,nssv1772703,nssv1772717,nssv1772748,nssv1772713,nssv1772733,nssv1772705,nssv1772746,nssv1772715,nssv1772754,nssv1772747 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1014302 1 80527731 80576162 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476736 M 29084 0 1 "" esv2529101 1 80545755 80546785 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5219877 M 1 1 0 "" NA18507 esv26646 1 80565011 80569483 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10608,esv13969 M 40 0 2 "" NA12044,NA19240 esv5636 1 80567218 80567966 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv28077 M 1 0 0 "" esv1382758 1 80567538 80567614 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4206808 M 2 0 1 "" HuRef nsv546662 1 80581622 80643280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718345 M 17421 0 1 "" nsv999379 1 80583111 80616434 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480133 M 29084 1 0 "" nsv475321 1 80607746 80607746 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014825 M 9 1 0 "" NA19240 dgv342n54 1 80611468 80682005 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546664,nsv546663 M 17421 0 2 "" 1780862001_A nsv462272 1 80611866 80682005 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538482 M 1557 0 1 "" 1780862001_A dgv343n54 1 80661396 80824646 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546667,nsv546665,nsv546666 M 17421 0 3 "" nsv946015 1 80688984 80691557 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1772806,nssv1772811,nssv1772789,nssv1772840,nssv1772801,nssv1772864,nssv1772860,nssv1772804,nssv1772778,nssv1772844,nssv1772791,nssv1772843,nssv1772783,nssv1772822,nssv1772792,nssv1772830,nssv1772787,nssv1772847,nssv1772799,nssv1772802,nssv1772861,nssv1772810,nssv1772795,nssv1772800,nssv1772788,nssv1772839,nssv1772779,nssv1772812,nssv1772780,nssv1772825,nssv1772790,nssv1772829,nssv1772784,nssv1772845,nssv1772863,nssv1772867,nssv1772781,nssv1772851,nssv1772785,nssv1772870,nssv1772786,nssv1772841,nssv1772808,nssv1772817,nssv1772798,nssv1772853,nssv1772797,nssv1772837,nssv1772856,nssv1772826,nssv1772855,nssv1772815,nssv1772857,nssv1772813,nssv1772854,nssv1772819,nssv1772805,nssv1772872,nssv1772782,nssv1772831,nssv1772859,nssv1772832,nssv1772862,nssv1772827,nssv1772794,nssv1772836,nssv1772796,nssv1772834,nssv1772793,nssv1772818,nssv1772858,nssv1772873,nssv1772848,nssv1772814,nssv1772809,nssv1772777,nssv1772846,nssv1772835,nssv1772869,nssv1772865,nssv1772849,nssv1772842,nssv1772868,nssv1772824,nssv1772852,nssv1772821,nssv1772823,nssv1772833,nssv1772816,nssv1772866,nssv1772871,nssv1772803,nssv1772820,nssv1772838,nssv1772828,nssv1772850,nssv1772807 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1008699 1 80722921 80780722 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482170 M 29084 1 0 "" esv2285809 1 80726437 80726845 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4978871 M 1 0 1 "" NA18507 nsv546668 1 80737078 80824646 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718351,nssv718350 M 17421 0 2 "" esv3363379 1 80776786 80776814 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899810,essv8899811,essv8899812 M 185 3 0 "" NA18510,NA18517,NA18909 esv3308135 1 80776796 80776797 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843284,essv7841673 M 185 2 0 "" NA19239,NA19240 esv3325622 1 80776799 80776813 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674123,essv8674122 M 185 2 0 "" NA19239,NA19240 esv3430503 1 80776802 80776821 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678433 M 185 1 0 "" NA19240 esv3427794 1 80780647 80780699 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899815,essv8899813,essv8899816 M 185 3 0 "" NA18510,NA18912,NA19172 esv3305187 1 80780662 80780663 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759801,essv7744303,essv7756373 M 185 3 0 "" NA18510,NA18912,NA19172 nsv478644 1 80871042 80871042 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018022 M 9 1 0 "" NA18507 esv3893768 1 80889228 80907511 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779679 M 3017 0 1 "" esv2445324 1 80891453 80892960 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5174863 M 1 0 1 "" NA18507 nsv524609 1 80891475 80906204 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700570 M 2026 0 1 "" nsv1621 1 80900479 80946481 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6701 M 9 0 1 "" NA12156 nsv525106 1 80944529 80950113 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701166 M 2026 0 1 "" nsv1633 1 80945264 80978295 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5681 M 9 1 0 "" NA19129 esv2645795 1 80966095 80967710 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5375379 M 1 0 1 "" NA18507 esv6371 1 80966689 80967500 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28812 M 1 0 0 "" esv2349812 1 80966739 80967454 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4528381 M 1 0 1 "" NA18507 esv5102 1 80966882 80967355 CNV loss Wang_et_al_2008 18987735 Sequencing essv27543 M 1 0 1 "" YH esv2763568 1 80975642 81005022 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032278 M 1109 0 1 "" SW_1047 nsv546669 1 80985936 81052898 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718353,nssv718352,nssv718354 M 17421 0 3 "" dgv344n54 1 81031725 81117146 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546672,nsv546673,nsv546670 M 17421 0 3 "" nsv546671 1 81031725 81118208 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718356 M 17421 1 0 "" nsv517432 1 81038591 81052898 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv664969,nssv652005,nssv687378,nssv670848,nssv689281,nssv660578,nssv664519,nssv672040,nssv665658,nssv683577 M 2026 0 10 "" nsv546674 1 81054822 81137217 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718359 M 17421 0 1 "" esv3309820 1 81124064 81124065 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837136,essv7839008 M 185 2 0 "" NA19238,NA19239 esv3387147 1 81124093 81124179 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674124 M 185 1 0 "" NA19238 esv3343121 1 81124111 81124130 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595190 M 185 1 0 "" NA12045 esv3303134 1 81124116 81124117 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7773086,essv7794187,essv7774554,essv7771939,essv7770955,essv7802906,essv7816692,essv7774385,essv7824492,essv7776449,essv7780650,essv7789095,essv7807609,essv7787651,essv7798513,essv7802030,essv7833745,essv7790606,essv7817407,essv7802449,essv7806807,essv7788856,essv7819613,essv7804737,essv7820639,essv7800090,essv7813705,essv7779474,essv7812280,essv7781703,essv7789520,essv7796651,essv7815629,essv7777855,essv7794668,essv7788327,essv7826215,essv7829685,essv7791798,essv7831105,essv7834662,essv7822718,essv7773473,essv7830353,essv7823479,essv7830815,essv7786525,essv7828799,essv7828122,essv7797149 M 185 50 0 "" NA06986,NA07000,NA07037,NA07347,NA11831,NA11881,NA11894,NA11920,NA12004,NA12045,NA12156,NA12234,NA12249,NA12489,NA12716,NA12750,NA12751,NA12814,NA18501,NA18508,NA18517,NA18519,NA18523,NA18526,NA18537,NA18542,NA18562,NA18570,NA18571,NA18577,NA18579,NA18592,NA18603,NA18608,NA18870,NA18907,NA18942,NA18947,NA18948,NA18949,NA18951,NA18959,NA18960,NA18964,NA18965,NA18970,NA18973,NA19114,NA19143,NA19238 nsv160614 1 81124117 81124117 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179192 M 24 "" esv3322101 1 81124119 81124127 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899851,essv8899834,essv8899829,essv8899852,essv8899823,essv8899837,essv8899843,essv8899830,essv8899845,essv8899864,essv8899817,essv8899856,essv8899828,essv8899844,essv8899822,essv8899827,essv8899863,essv8899853,essv8899819,essv8899848,essv8899833,essv8899860,essv8899838,essv8899857,essv8899839,essv8899840,essv8899861,essv8899854,essv8899865,essv8899824,essv8899850,essv8899820,essv8899821,essv8899862,essv8899831,essv8899842,essv8899855,essv8899849,essv8899859,essv8899835,essv8899818,essv8899826,essv8899841,essv8899832,essv8899846 M 185 45 0 "" NA06986,NA07000,NA07037,NA07347,NA11831,NA11881,NA11894,NA11920,NA12004,NA12045,NA12156,NA12249,NA12489,NA12716,NA12750,NA12751,NA18501,NA18508,NA18517,NA18519,NA18523,NA18526,NA18537,NA18542,NA18562,NA18570,NA18571,NA18577,NA18579,NA18592,NA18603,NA18608,NA18870,NA18907,NA18942,NA18947,NA18948,NA18949,NA18951,NA18959,NA18960,NA18964,NA18965,NA18973,NA19114 nsv1644 1 81154388 81208313 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1223,nssv4371,nssv6710,nssv10068 M 9 0 4 "" NA12156,NA12878,NA18956,NA19240 nsv524462 1 81158977 81159513 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700396 M 2026 0 1 "" esv2763569 1 81165790 81226406 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032289 M 1109 1 0 "" SW_1510 nsv511150 1 81173702 81176348 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625999 M 1 0 1 "" 1 nsv546675 1 81173780 81176432 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718360 M 17421 0 1 "" nsv511701 1 81175416 81183746 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626341 M 1 0 1 "" 1 esv29461 1 81175548 81190695 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19464,esv15779 M 40 7 0 "" NA07045,NA11931,NA11993,NA12749,NA18517,NA18916,NA19129 nsv546676 1 81175571 81176432 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718363,nssv718362,nssv718361,nssv718365,nssv718364,nssv718369,nssv718366,nssv718368,nssv718367 M 17421 5 4 "" nsv546677 1 81175571 81192107 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718370 M 17421 1 0 "" nsv436529 1 81175575 81183857 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466062 M 2 0 1 "" NA18505 nsv508348 1 81176080 81220990 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618977,nssv617489 M 4 0 2 "" CHM,NA10860 nsv510913 1 81176080 81220990 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621651 M 4 0 0 "" NA15510 esv2486529 1 81176645 81184206 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5195261 M 1 0 1 "" NA18507 esv1009096 1 81177219 81183720 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564372 M 3 0 1 "" HuRef esv2130910 1 81177231 81183739 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4881939 M 1 0 1 "" NA18507 esv3369 1 81177315 81183618 CNV loss Wang_et_al_2008 18987735 Sequencing essv25810 M 1 0 1 "" YH nsv506936 1 81180757 81186757 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619237 M 4 0 0 "" NA10860 nsv546678 1 81193528 81352317 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718371 M 17421 0 1 "" nsv823309 1 81194858 81197013 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431818 M 31 0 1 "" AK20 nsv830348 1 81222392 81368986 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447373 M 95 0 1 "" esv2439392 1 81296115 81297104 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5359938 M 1 1 0 "" NA18507 nsv1655 1 81303675 81348642 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7298 M 9 0 1 "" NA12156 nsv946016 1 81314507 81319219 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773804,nssv1773224,nssv1773207,nssv1773208,nssv1773260,nssv1773270,nssv1773266,nssv1773242,nssv1773268,nssv1773220,nssv1773198,nssv1773216,nssv1772875,nssv1773236,nssv1773810,nssv1773223,nssv1773261,nssv1773247,nssv1773807,nssv1773235,nssv1773811,nssv1773246,nssv1773800,nssv1773213,nssv1773201,nssv1773210,nssv1773205,nssv1773231,nssv1773808,nssv1773206,nssv1773269,nssv1773251,nssv1773265,nssv1773252,nssv1773809,nssv1773273,nssv1773805,nssv1773241,nssv1773264,nssv1773225,nssv1773806,nssv1773255,nssv1773212,nssv1773245,nssv1773200,nssv1773232,nssv1773801,nssv1773258,nssv1773812,nssv1773259,nssv1773262,nssv1773233,nssv1773211,nssv1773221,nssv1773204,nssv1773243,nssv1773263,nssv1773257,nssv1773203,nssv1773249,nssv1773214,nssv1773272,nssv1773267,nssv1773250,nssv1773803,nssv1773215,nssv1773199,nssv1773253,nssv1773802,nssv1773254,nssv1773202,nssv1773274,nssv1773244,nssv1773248,nssv1773229,nssv1773275,nssv1773234,nssv1773279,nssv1773271,nssv1773230,nssv1773226,nssv1773228,nssv1773276,nssv1773237,nssv1773218,nssv1773219,nssv1772874,nssv1773240,nssv1773256,nssv1773209,nssv1773278,nssv1773239,nssv1773238,nssv1773277,nssv1773227,nssv1773222,nssv1773217 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946017 1 81335883 81337671 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773361,nssv1773354,nssv1773286,nssv1773337,nssv1773304,nssv1773369,nssv1773363,nssv1773326,nssv1773362,nssv1773306,nssv1773292,nssv1773312,nssv1773311,nssv1773331,nssv1773366,nssv1773305,nssv1773300,nssv1773280,nssv1773360,nssv1773334,nssv1773298,nssv1773373,nssv1773293,nssv1773325,nssv1773294,nssv1773319,nssv1773308,nssv1773367,nssv1773302,nssv1773339,nssv1773357,nssv1773316,nssv1773282,nssv1773374,nssv1773287,nssv1773333,nssv1773289,nssv1773335,nssv1773365,nssv1773314,nssv1773309,nssv1773343,nssv1773295,nssv1773344,nssv1773359,nssv1773338,nssv1773358,nssv1773375,nssv1773283,nssv1773328,nssv1773288,nssv1773352,nssv1773299,nssv1773353,nssv1773364,nssv1773303,nssv1773290,nssv1773348,nssv1773284,nssv1773313,nssv1773301,nssv1773323,nssv1773285,nssv1773371,nssv1773291,nssv1773342,nssv1773297,nssv1773372,nssv1773281,nssv1773332,nssv1773296,nssv1773349,nssv1773315,nssv1773329,nssv1773356,nssv1773321,nssv1773370,nssv1773327,nssv1773340,nssv1773346,nssv1773317,nssv1773307,nssv1773347,nssv1773330,nssv1773336,nssv1773324,nssv1773368,nssv1773350,nssv1773320,nssv1773310,nssv1773341,nssv1773318,nssv1773351,nssv1773322,nssv1773355,nssv1773345,nssv1773376 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2610232 1 81432221 81434137 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5314723 M 1 0 0 "" NA18507 esv8074 1 81432727 81434147 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30515 M 1 0 0 "" nsv946019 1 81446942 81447637 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773418,nssv1773438,nssv1773477,nssv1773485,nssv1773480,nssv1773452,nssv1773422,nssv1773468,nssv1773471,nssv1773459,nssv1773400,nssv1773440,nssv1773475,nssv1773483,nssv1773403,nssv1773465,nssv1773478,nssv1773490,nssv1773479,nssv1773432,nssv1773474,nssv1773455,nssv1773406,nssv1773421,nssv1773412,nssv1773486,nssv1773404,nssv1773488,nssv1773405,nssv1773453,nssv1773416,nssv1773394,nssv1773408,nssv1773445,nssv1773397,nssv1773429,nssv1773401,nssv1773426,nssv1773402,nssv1773451,nssv1773476,nssv1773439,nssv1773472,nssv1773420,nssv1773473,nssv1773447,nssv1773407,nssv1773482,nssv1773425,nssv1773437,nssv1773409,nssv1773436,nssv1773423,nssv1773449,nssv1773396,nssv1773448,nssv1773399,nssv1773428,nssv1773398,nssv1773424,nssv1773395,nssv1773444,nssv1773415,nssv1773461,nssv1773411,nssv1773469,nssv1773414,nssv1773446,nssv1773410,nssv1773457,nssv1773413,nssv1773467,nssv1773462,nssv1773442,nssv1773417,nssv1773460,nssv1773433,nssv1773443,nssv1773470,nssv1773466,nssv1773481,nssv1773463,nssv1773489,nssv1773435,nssv1773430,nssv1773434,nssv1773484,nssv1773441,nssv1773456,nssv1773454,nssv1773419,nssv1773458,nssv1773431,nssv1773487,nssv1773464,nssv1773427,nssv1773450 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2474555 1 81459728 81461345 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5212380 M 1 0 1 "" NA18507 esv7669 1 81460124 81460969 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30110 M 1 0 0 "" esv1916717 1 81460188 81460900 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4539958 M 1 0 1 "" NA18507 esv3207 1 81460296 81460876 CNV loss Wang_et_al_2008 18987735 Sequencing essv25648 M 1 0 1 "" YH nsv159917 1 81460373 81460701 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178495 M 24 "" nsv477876 1 81478681 81478681 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015438 M 9 1 0 "" NA18517 nsv472355 1 81480806 81480806 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012435 M 9 1 0 "" NA18555 dgv204n100 1 81507642 81541417 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000126,nsv1014269 M 29084 2 0 "" nsv477322 1 81553369 81553369 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018780 M 9 1 0 "" NA18517 nsv518182 1 81589073 81597713 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695603 M 2026 0 1 "" nsv1666 1 81616518 81622954 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7304 M 9 1 0 "" NA12156 nsv470722 1 81643352 81695539 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547748 M 443 0 1 "" HGDP01061 nsv823320 1 81655191 81655672 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423129 M 31 1 0 "" NA18999 esv2758946 1 81660005 81669334 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756849 M 270 0 2 "" NA06991,NA07029 nsv946020 1 81664758 81667567 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774428,nssv1774469,nssv1774431,nssv1774489,nssv1774424,nssv1774479,nssv1774439,nssv1774484,nssv1774501,nssv1774455,nssv1774443,nssv1774457,nssv1774498,nssv1774461,nssv1774492,nssv1774441,nssv1774497,nssv1774462,nssv1774418,nssv1774486,nssv1774432,nssv1774451,nssv1774427,nssv1774505,nssv1774425,nssv1774450,nssv1774446,nssv1774504,nssv1774435,nssv1774488,nssv1774433,nssv1774506,nssv1774436,nssv1774482,nssv1774421,nssv1774452,nssv1774444,nssv1774465,nssv1774419,nssv1774511,nssv1774422,nssv1774480,nssv1774423,nssv1774491,nssv1774434,nssv1774503,nssv1774437,nssv1774478,nssv1774495,nssv1774473,nssv1774499,nssv1774481,nssv1774416,nssv1774470,nssv1774500,nssv1774459,nssv1774493,nssv1774458,nssv1774494,nssv1774490,nssv1774417,nssv1774468,nssv1774429,nssv1774466,nssv1774430,nssv1774509,nssv1774496,nssv1774447,nssv1774420,nssv1773491,nssv1774426,nssv1774508,nssv1774483,nssv1774438,nssv1774474,nssv1774507,nssv1774460,nssv1774475,nssv1774477,nssv1774454,nssv1774487,nssv1774467,nssv1774471,nssv1774440,nssv1774510,nssv1774502,nssv1774456,nssv1774445,nssv1774464,nssv1774476,nssv1774442,nssv1774463,nssv1774485,nssv1774449,nssv1774448,nssv1774453,nssv1774472 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv462361 1 81673593 81720518 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538546 M 1557 0 1 "" 1788485381_A nsv546679 1 81673593 81720518 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173043 M 17421 0 1 "" 1788485381_A esv2763570 1 81708828 81814938 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032302 M 1109 1 0 "" SW_1389 nsv946021 1 81739798 81743790 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774519,nssv1774516,nssv1774514,nssv1774517,nssv1774521,nssv1774512,nssv1774518,nssv1774522,nssv1774520,nssv1774513,nssv1774515 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2464487 1 81751727 81753147 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5348972 M 1 0 1 "" NA18507 esv2029393 1 81752102 81752658 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4978804 M 1 0 1 "" NA18507 esv4235 1 81752186 81752704 CNV loss Wang_et_al_2008 18987735 Sequencing essv26676 M 1 0 1 "" YH esv2557027 1 81752321 81752441 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5346685 M 1 0 1 "" NA18507 nsv1013276 1 81776337 81843117 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474785 M 29084 1 0 "" nsv830359 1 81805673 81979888 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447384,nssv1447407,nssv1447395 M 95 3 0 "" nsv946022 1 81833162 81835097 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774604,nssv1774613,nssv1774526,nssv1774523,nssv1774524,nssv1774593,nssv1774547,nssv1774575,nssv1774539,nssv1774548,nssv1774605,nssv1774584,nssv1774529,nssv1774578,nssv1774606,nssv1774561,nssv1774603,nssv1774550,nssv1774540,nssv1774569,nssv1774608,nssv1774580,nssv1774543,nssv1774563,nssv1774552,nssv1774567,nssv1774554,nssv1774616,nssv1774541,nssv1774583,nssv1774536,nssv1774572,nssv1774534,nssv1774570,nssv1774600,nssv1774592,nssv1774527,nssv1774565,nssv1774535,nssv1774587,nssv1774531,nssv1774590,nssv1774530,nssv1774549,nssv1774525,nssv1774612,nssv1774544,nssv1774618,nssv1774607,nssv1774596,nssv1774545,nssv1774577,nssv1774551,nssv1774614,nssv1774542,nssv1774599,nssv1774601,nssv1774594,nssv1774602,nssv1774589,nssv1774533,nssv1774557,nssv1774532,nssv1774611,nssv1774609,nssv1774615,nssv1774528,nssv1774581,nssv1774537,nssv1774558,nssv1774538,nssv1774588,nssv1774619,nssv1774564,nssv1774571,nssv1774560,nssv1774586,nssv1774573,nssv1774559,nssv1774566,nssv1774574,nssv1774546,nssv1774617,nssv1774562,nssv1774610,nssv1774576,nssv1774591,nssv1774598,nssv1774579,nssv1774555,nssv1774556,nssv1774597,nssv1774553,nssv1774582,nssv1774585,nssv1774568,nssv1774595 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv520460 1 81847088 81856328 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697434 M 2026 0 1 "" nsv499801 1 81852135 81854459 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585486 M 9 0 0 "" nsv546680 1 81852298 81875512 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718372 M 17421 1 0 "" nsv7178 1 81853674 81892460 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4376 M 9 0 0 "" NA12878 esv999385 1 81857836 81857886 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578536 M 3 0 1 "" HuRef nsv160952 1 81857837 81857887 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179530 M 24 "" nsv546681 1 81911328 81919877 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718373 M 17421 1 0 "" nsv946023 1 81958812 81962734 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774636,nssv1772896,nssv1774641,nssv1772937,nssv1772894,nssv1772924,nssv1772956,nssv1772914,nssv1772953,nssv1772921,nssv1772901,nssv1772943,nssv1774622,nssv1772959,nssv1774628,nssv1772931,nssv1774634,nssv1772913,nssv1772954,nssv1772964,nssv1774631,nssv1772958,nssv1774621,nssv1772942,nssv1772951,nssv1772936,nssv1774639,nssv1772927,nssv1772899,nssv1772926,nssv1774640,nssv1772945,nssv1772892,nssv1772962,nssv1774637,nssv1772919,nssv1772955,nssv1772893,nssv1774623,nssv1772944,nssv1774635,nssv1772965,nssv1774626,nssv1772904,nssv1774638,nssv1772933,nssv1774633,nssv1772940,nssv1774624,nssv1772918,nssv1772947,nssv1772923,nssv1772952,nssv1772938,nssv1774627,nssv1772897,nssv1772948,nssv1772957,nssv1774632,nssv1772903,nssv1772898,nssv1774620,nssv1772950,nssv1772925,nssv1774630,nssv1772966,nssv1774629,nssv1772915,nssv1774625,nssv1772895,nssv1772949,nssv1772907,nssv1772960,nssv1772909,nssv1772905,nssv1772900,nssv1772902,nssv1772912,nssv1772922,nssv1772932,nssv1772906,nssv1772930,nssv1772910,nssv1772929,nssv1772934,nssv1772911,nssv1772908,nssv1772961,nssv1772920,nssv1772939,nssv1772928,nssv1772946,nssv1772941,nssv1772917,nssv1772963,nssv1772916,nssv1772935 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1159587 1 81972605 81973362 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3870215 M 2 0 1 "" HuRef nsv506937 1 82000838 82006838 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617533,nssv623272,nssv620658 M 4 0 0 "" CHM,NA15510,NA18994 nsv823331 1 82003662 82004183 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434175 M 31 0 1 "" NA18570 esv3380260 1 82084628 82084638 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674128,essv8674129 M 185 2 0 LPHN2 NA19239,NA19240 esv3308604 1 82084629 82084630 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843273,essv7842027 M 185 2 0 LPHN2 NA19239,NA19240 esv3307207 1 82084631 82084632 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7832726,essv7785380,essv7786306,essv7828462,essv7831608,essv7834163,essv7825630,essv7803129,essv7777674,essv7800028,essv7781397,essv7804825,essv7832230,essv7773840,essv7805481,essv7790859,essv7792308,essv7772354,essv7775302,essv7784051,essv7797165,essv7802574,essv7799886,essv7799422,essv7805689,essv7809490,essv7826088,essv7776505,essv7807138,essv7821853,essv7835458,essv7776356,essv7771503,essv7794155,essv7797793,essv7813225,essv7812232,essv7792013,essv7806433,essv7814904,essv7781057,essv7801440 M 185 42 0 LPHN2 NA07000,NA07037,NA07051,NA07346,NA07357,NA10851,NA11829,NA11831,NA11840,NA11881,NA11931,NA12003,NA12006,NA12045,NA12144,NA12154,NA12156,NA12234,NA12414,NA12717,NA12749,NA12761,NA12776,NA18498,NA18501,NA18502,NA18504,NA18508,NA18519,NA18858,NA18861,NA18870,NA18912,NA18916,NA19093,NA19099,NA19114,NA19129,NA19138,NA19239,NA19240,NA19257 esv3323603 1 82084637 82084647 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899930,essv8899932,essv8899907,essv8899927,essv8899936,essv8899920,essv8899933,essv8899919,essv8899921,essv8899910,essv8899928,essv8899906,essv8899912,essv8899943,essv8899909,essv8899924,essv8899913,essv8899942,essv8899925,essv8899923,essv8899940,essv8899934,essv8899918,essv8899905,essv8899908,essv8899941,essv8899911,essv8899916,essv8899944,essv8899938,essv8899914,essv8899935,essv8899939,essv8899922,essv8899929,essv8899917,essv8899931 M 185 37 0 LPHN2 NA07000,NA07037,NA07051,NA07346,NA07357,NA10851,NA11829,NA11831,NA11931,NA12003,NA12006,NA12045,NA12144,NA12154,NA12156,NA12414,NA12717,NA12749,NA12761,NA12776,NA18498,NA18501,NA18502,NA18504,NA18508,NA18519,NA18858,NA18861,NA18870,NA18912,NA18916,NA19093,NA19099,NA19114,NA19129,NA19138,NA19257 nsv473455 1 82156457 82156457 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014236 M 9 1 0 LPHN2 NA19129 nsv437590 1 82184462 82187284 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467471 M 60 0 1 LPHN2 NA10861 nsv437226 1 82184462 82190140 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467107 M 60 0 1 LPHN2 NA19173 nsv1012475 1 82263170 82606210 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473237 M 29084 1 0 "" nsv473128 1 82272210 82272210 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013525 M 9 1 0 "" NA19129 nsv946024 1 82322648 82323832 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773053,nssv1773017,nssv1772975,nssv1773036,nssv1772991,nssv1773003,nssv1773050,nssv1773029,nssv1772982,nssv1773008,nssv1772973,nssv1773027,nssv1772981,nssv1772994,nssv1773052,nssv1773038,nssv1773049,nssv1773032,nssv1772989,nssv1772999,nssv1772985,nssv1773063,nssv1772987,nssv1773060,nssv1772998,nssv1773014,nssv1773048,nssv1773006,nssv1772974,nssv1772967,nssv1772968,nssv1773056,nssv1772996,nssv1773043,nssv1772970,nssv1773058,nssv1772969,nssv1773018,nssv1773046,nssv1773013,nssv1772976,nssv1773002,nssv1773045,nssv1773033,nssv1772978,nssv1773040,nssv1772979,nssv1773028,nssv1772988,nssv1773061,nssv1772977,nssv1773010,nssv1773044,nssv1773034,nssv1772971,nssv1773062,nssv1772972,nssv1773004,nssv1773047,nssv1773021,nssv1773051,nssv1773037,nssv1772984,nssv1773054,nssv1772986,nssv1773020,nssv1772983,nssv1772993,nssv1772980,nssv1773041,nssv1772995,nssv1772990,nssv1773023,nssv1773039,nssv1773012,nssv1773001,nssv1773035,nssv1773030,nssv1773024,nssv1773015,nssv1773055,nssv1773057,nssv1773016,nssv1773059,nssv1772992,nssv1773022,nssv1772997,nssv1773000,nssv1773019,nssv1773009,nssv1773005,nssv1773026,nssv1773007,nssv1773031,nssv1773025,nssv1773011,nssv1773042 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1004892 1 82337563 82459173 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699593 M 29084 1 0 "" esv2763571 1 82343774 82364195 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032313 M 1109 0 1 "" SW_0071 nsv526394 1 82349862 82350892 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702693 M 2026 0 1 "" nsv830370 1 82356324 82576932 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447418 M 95 1 0 "" nsv481569 1 82455859 82455859 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011825 M 9 0 0 "" nsv481275 1 82459461 82459461 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016768 M 9 0 0 "" nsv521171 1 82459642 82462594 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694422 M 2026 0 1 "" nsv509357 1 82481034 82505504 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623785 M 4 1 0 "" NA18994 esv1104195 1 82494275 82494275 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3876871 M 2 1 0 "" HuRef nsv475358 1 82529918 82529918 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019865 M 9 1 0 "" NA19240 nsv475356 1 82530402 82530402 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014472 M 9 1 0 "" NA19240 nsv479187 1 82531304 82531304 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014216 M 9 0 0 "" esv29844 1 82576604 82578358 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19120 M 40 1 0 "" NA07045 esv3303003 1 82653258 82653377 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7732608,essv7736892,essv7737274,essv7735819,essv7734080,essv7737155 M 185 6 0 "" NA10851,NA12144,NA12287,NA18508,NA18517,NA19108 nsv159508 1 82665083 82672074 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178086 M 24 "" nsv520462 1 82673852 82676831 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697435 M 2026 0 1 "" dgv205n100 1 82677394 82773302 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007148,nsv1010305 M 29084 2 0 "" esv2601757 1 82735279 82736732 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5277916 M 1 0 1 "" NA18507 esv2118095 1 82735761 82736394 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4870940 M 1 0 1 "" NA18507 nsv546682 1 82764221 82817399 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718374 M 17421 0 1 "" nsv999235 1 82792064 82886458 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699594 M 29084 1 0 "" nsv470723 1 82795183 82844938 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547749 M 443 0 1 "" HGDP00712 esv3302879 1 82795378 82795495 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7737492,essv7733341,essv7737160,essv7735945,essv7732142,essv7734837 M 185 6 0 "" NA18508,NA18570,NA18945,NA18949,NA19114,NA19225 nsv546683 1 82800983 82817399 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718375 M 17421 0 1 "" nsv528062 1 82805020 82817399 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704598 M 2026 0 1 "" esv2481329 1 82814181 82815920 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5304834 M 1 0 1 "" NA18507 esv8094 1 82815013 82815776 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30535 M 1 0 0 "" esv2288624 1 82815047 82815734 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4508229 M 1 0 1 "" NA18507 esv2805 1 82815197 82815622 CNV loss Wang_et_al_2008 18987735 Sequencing essv25246 M 1 0 1 "" YH nsv159537 1 82815233 82815552 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178115 M 24 "" esv3424652 1 82845605 82845624 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595368 M 185 1 0 "" NA12812 esv2750841 1 82851559 82950167 CNV loss Pinto_et_al_2007 17911159 SNP array essv6983218,essv6989353,essv6983217,essv6989755 M 771 0 4 "" BEC_557 esv2763572 1 82886470 82891920 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032324 M 1109 0 1 "" SW_1323 esv990799 1 82896924 82901062 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565730 M 3 0 1 "" HuRef esv7649 1 82898294 82900447 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30090 M 1 0 0 "" nsv511702 1 82898496 82900834 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626342 M 1 0 1 "" 1 esv4307 1 82898511 82900299 CNV loss Wang_et_al_2008 18987735 Sequencing essv26748 M 1 0 1 "" YH esv1040469 1 82898546 82900157 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4154023 M 2 0 1 "" HuRef esv988721 1 82898556 82900166 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584536 M 3 0 1 "" HuRef nsv1007436 1 82901821 82950180 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699595 M 29084 0 1 "" esv2342174 1 82922263 82922701 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4809019 M 1 0 1 "" NA18507 nsv546684 1 82975524 83060781 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718376 M 17421 1 0 "" nsv546685 1 82998367 83037596 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718377 M 17421 0 1 "" nsv1677 1 83015818 83047519 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10076 M 9 1 0 "" NA18956 nsv819233 1 83027351 83030913 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419558 M 2 1 0 "" AK1 esv3760 1 83074867 83076972 CNV loss Wang_et_al_2008 18987735 Sequencing essv26201 M 1 0 1 "" YH nsv823342 1 83074869 83076923 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440819,nssv1423967,nssv1426400,nssv1427260 M 31 0 4 "" AK6,AK8,NA18582,NA18969 nsv524169 1 83082401 83103706 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700049 M 2026 0 1 "" esv2758947 1 83101150 83780899 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757738,esv2756850 M 270 16 3 "" NA10860,NA11992,NA12005,NA12750,NA18605,NA18859,NA18862,NA18863,NA18994,NA19131,NA19132,NA19138,NA19152,NA19159,NA19160,NA19161,NA19193,NA19201,NA19202 nsv830381 1 83172924 83336614 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447429,nssv1447462,nssv1447518,nssv1447440,nssv1447529,nssv1447473,nssv1447506,nssv1447484,nssv1447495,nssv1447540,nssv1447451 M 95 11 0 "" nsv1688 1 83203451 83236020 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10082 M 9 1 0 "" NA18956 esv2395733 1 83251673 83252065 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4746946 M 1 0 1 "" NA18507 esv1000088 1 83251853 83251912 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578626 M 3 0 1 "" HuRef esv1148205 1 83257350 83257477 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4343288 M 2 0 1 "" HuRef nsv1699 1 83257605 83303144 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6719 M 9 0 1 "" NA12156 nsv428113 1 83269464 83780899 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450487,nssv450476 M 62 2 0 "" NA18498,NA19181 nsv506938 1 83358896 83364896 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619238,nssv623273 M 4 0 0 "" NA10860,NA18994 esv1003701 1 83361353 83361353 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581080 M 3 1 0 "" HuRef nsv462372 1 83369889 83489547 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538551 M 1557 1 0 "" HGDP00913 dgv345n54 1 83369889 83513112 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546687,nsv546686 M 17421 2 0 "" HGDP00913,HGDP00917 nsv946026 1 83370672 83402979 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773120,nssv1773081,nssv1773100,nssv1773076,nssv1773109,nssv1773088,nssv1773126,nssv1773077,nssv1773102,nssv1773142,nssv1773113,nssv1773066,nssv1773103,nssv1773140,nssv1773108,nssv1773093,nssv1773121,nssv1773078,nssv1773114,nssv1773074,nssv1773124,nssv1773086,nssv1773094,nssv1773072,nssv1773104,nssv1773082,nssv1773115,nssv1773079,nssv1773105,nssv1773084,nssv1773096,nssv1773141,nssv1773129,nssv1773068,nssv1773110,nssv1773071,nssv1773099,nssv1773138,nssv1773131,nssv1773070,nssv1773130,nssv1773095,nssv1773111,nssv1773139,nssv1773098,nssv1773136,nssv1773107,nssv1773135,nssv1773118,nssv1773143,nssv1773064,nssv1773067,nssv1773125,nssv1773085,nssv1773117,nssv1773075,nssv1773101,nssv1773083,nssv1773106,nssv1773069,nssv1773090,nssv1773065,nssv1773087,nssv1773073,nssv1773128,nssv1773137,nssv1773112,nssv1773092,nssv1773122,nssv1773080,nssv1773119,nssv1773134,nssv1773097,nssv1773091,nssv1773127,nssv1773089,nssv1773123,nssv1773132,nssv1773133,nssv1773116 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv27722 1 83370836 83727807 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13363,esv19089 M 40 1 1 "" NA12776,NA18907 esv2613202 1 83377100 83702376 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5268501 M 1 0 1 "" NA18507 nsv10339 1 83389337 83394143 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv15762 M 31 0 1 "" NA18502 esv3365383 1 83398379 83398389 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863720 M 185 1 0 "" NA12005 nsv946027 1 83414170 83420243 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773146,nssv1773147,nssv1773150,nssv1773154,nssv1773151,nssv1773174,nssv1773153,nssv1773180,nssv1773171,nssv1773160,nssv1774111,nssv1773164,nssv1773166,nssv1773157,nssv1773182,nssv1773167,nssv1774114,nssv1773162,nssv1773152,nssv1773163,nssv1773172,nssv1773179,nssv1773158,nssv1774109,nssv1773145,nssv1773175,nssv1773169,nssv1774112,nssv1774113,nssv1773183,nssv1773178,nssv1773176,nssv1773168,nssv1774108,nssv1773161,nssv1773173,nssv1773149,nssv1773165,nssv1774115,nssv1773148,nssv1773156,nssv1773159,nssv1773144,nssv1774110,nssv1773181,nssv1773177,nssv1773170,nssv1773155 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946028 1 83426943 83454250 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774126,nssv1774165,nssv1774124,nssv1774174,nssv1774131,nssv1774185,nssv1774132,nssv1774143,nssv1774140,nssv1774146,nssv1774194,nssv1774155,nssv1774192,nssv1774150,nssv1774137,nssv1774152,nssv1774145,nssv1774156,nssv1774117,nssv1774167,nssv1774190,nssv1774116,nssv1774136,nssv1774139,nssv1774186,nssv1774161,nssv1774119,nssv1774170,nssv1774129,nssv1774148,nssv1774189,nssv1774154,nssv1774122,nssv1774162,nssv1774120,nssv1774166,nssv1774134,nssv1774142,nssv1774118,nssv1774151,nssv1774123,nssv1774175,nssv1774147,nssv1774163,nssv1774133,nssv1774180,nssv1774138,nssv1774181,nssv1774128,nssv1774177,nssv1774130,nssv1774173,nssv1774187,nssv1774153,nssv1774135,nssv1774164,nssv1774193,nssv1774169,nssv1774188,nssv1774159,nssv1774191,nssv1774172,nssv1774195,nssv1774171,nssv1774125,nssv1774184,nssv1774121,nssv1774179,nssv1774127,nssv1774183,nssv1774144,nssv1774160,nssv1774149,nssv1774178,nssv1774168,nssv1774141,nssv1774157,nssv1774182,nssv1774158,nssv1774176 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv518391 1 83437707 83489547 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695821 M 2026 0 1 "" nsv1710 1 83452973 83487164 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6728 M 9 0 1 "" NA12156 nsv946030 1 83455477 83456798 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774249,nssv1774282,nssv1774310,nssv1774275,nssv1774257,nssv1774286,nssv1774261,nssv1774269,nssv1774250,nssv1774299,nssv1774309,nssv1774276,nssv1774245,nssv1774258,nssv1774235,nssv1774291,nssv1774239,nssv1774272,nssv1774234,nssv1774285,nssv1774311,nssv1774284,nssv1774304,nssv1774297,nssv1774237,nssv1774294,nssv1774248,nssv1774295,nssv1774262,nssv1774260,nssv1774251,nssv1774293,nssv1774303,nssv1774273,nssv1774306,nssv1774256,nssv1774264,nssv1774271,nssv1774240,nssv1774302,nssv1774243,nssv1774292,nssv1774255,nssv1774265,nssv1774307,nssv1774233,nssv1774305,nssv1774274,nssv1774247,nssv1774266,nssv1774246,nssv1774267,nssv1774236,nssv1774263,nssv1774252,nssv1774296,nssv1774244,nssv1774277,nssv1774242,nssv1774259,nssv1774253,nssv1774289,nssv1774254,nssv1774279,nssv1774308,nssv1774298,nssv1774241,nssv1774287,nssv1774238,nssv1774281,nssv1774312,nssv1774290,nssv1774301,nssv1774270,nssv1774300,nssv1774280,nssv1774268,nssv1774283,nssv1774288,nssv1774278 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946031 1 83456798 83508464 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774315,nssv1774327,nssv1774322,nssv1774324,nssv1774319,nssv1774321,nssv1774320,nssv1773523,nssv1773525,nssv1774328,nssv1773521,nssv1774318,nssv1773528,nssv1773507,nssv1774325,nssv1773524,nssv1774330,nssv1773522,nssv1773514,nssv1774314,nssv1773509,nssv1773519,nssv1773510,nssv1774316,nssv1773516,nssv1774331,nssv1773520,nssv1774332,nssv1774323,nssv1773517,nssv1773527,nssv1774317,nssv1773508,nssv1774313,nssv1774329,nssv1773518,nssv1773526,nssv1773512,nssv1774333,nssv1773531,nssv1773511,nssv1773515,nssv1773506,nssv1773532,nssv1773513,nssv1773529,nssv1773530,nssv1774326 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv33133 1 83495639 83512991 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98965 M 51 0 1 "" 21938 nsv946032 1 83508464 83599574 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773535,nssv1773541,nssv1773542,nssv1773536,nssv1773540,nssv1773538,nssv1773539,nssv1773543,nssv1773533,nssv1773537,nssv1773534 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv33892 1 83512991 83545170 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv100911 M 51 1 0 "" 21656 esv988709 1 83516582 83520681 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586728 M 3 1 0 "" HuRef nsv830392 1 83591075 83761968 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447551 M 95 1 0 "" nsv946033 1 83599574 83601742 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773546,nssv1773580,nssv1773553,nssv1773588,nssv1773551,nssv1773558,nssv1773550,nssv1773562,nssv1773560,nssv1773591,nssv1773586,nssv1773565,nssv1773572,nssv1773559,nssv1773561,nssv1773571,nssv1773582,nssv1773569,nssv1773584,nssv1773552,nssv1773567,nssv1773547,nssv1773574,nssv1773563,nssv1773555,nssv1773581,nssv1773549,nssv1773587,nssv1773564,nssv1773570,nssv1773589,nssv1773573,nssv1773544,nssv1773554,nssv1773566,nssv1773583,nssv1773578,nssv1773579,nssv1773576,nssv1773577,nssv1773575,nssv1773568,nssv1773556,nssv1773557,nssv1773545,nssv1773585,nssv1773548,nssv1773590 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946034 1 83601742 83727940 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773604,nssv1773618,nssv1773598,nssv1773660,nssv1773616,nssv1773658,nssv1773605,nssv1773648,nssv1773612,nssv1773635,nssv1773607,nssv1773615,nssv1773601,nssv1773644,nssv1773602,nssv1773655,nssv1773600,nssv1773659,nssv1773667,nssv1773639,nssv1773671,nssv1773642,nssv1773668,nssv1773656,nssv1773603,nssv1773650,nssv1773666,nssv1773622,nssv1773623,nssv1773629,nssv1773595,nssv1773633,nssv1773610,nssv1773652,nssv1773621,nssv1773631,nssv1773662,nssv1773641,nssv1773669,nssv1773654,nssv1773614,nssv1773651,nssv1773670,nssv1773661,nssv1773606,nssv1773653,nssv1773599,nssv1773617,nssv1773620,nssv1773647,nssv1773593,nssv1773625,nssv1773663,nssv1773636,nssv1773664,nssv1773619,nssv1773611,nssv1773630,nssv1773594,nssv1773637,nssv1773665,nssv1773628,nssv1773597,nssv1773649,nssv1773596,nssv1773657,nssv1773609,nssv1773627,nssv1773613,nssv1773632,nssv1773608,nssv1773624,nssv1773643,nssv1773634,nssv1773626,nssv1773646,nssv1773645,nssv1773638,nssv1773640,nssv1773592 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv818256 1 83618302 83629957 CNV gain Wang_et_al_2007 17921354 SNP array nssv1415802,nssv1415803 M 112 2 0 "" NA10860,NA11992 nsv830403 1 83631583 83708958 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447562 M 95 0 1 "" nsv546688 1 83730919 83774824 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718378 M 17421 0 1 "" nsv508020 1 83786238 83792238 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621471,nssv622292,nssv624214 M 4 0 0 "" NA10860,NA15510,NA18994 esv3302865 1 83828811 83829932 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7737217,essv7736382,essv7733091,essv7732008,essv7735096,essv7738716 M 185 6 0 "" NA10847,NA18501,NA18522,NA18566,NA18870,NA18912 esv3357249 1 83842653 83842681 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899946,essv8899947,essv8899950,essv8899945,essv8899949,essv8899951 M 185 6 0 "" NA18502,NA18504,NA18861,NA19093,NA19172,NA19190 esv3429649 1 83842659 83842668 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674136,essv8674135 M 185 2 0 "" NA19238,NA19240 esv3309127 1 83842661 83842662 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838698 M 185 1 0 "" NA19238 nsv506939 1 83866456 83872456 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619239,nssv623274,nssv620659 M 4 0 0 "" NA10860,NA15510,NA18994 esv29802 1 83898773 83899674 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12667 M 40 0 1 "" NA11894 nsv506940 1 83918146 83924146 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619240,nssv623275,nssv620660 M 4 0 0 "" NA10860,NA15510,NA18994 nsv1721 1 83960967 83992523 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10089 M 9 1 0 "" NA18956 esv33088 1 84007222 84008354 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93620 M 51 0 1 "" 21972 esv33557 1 84008760 84009436 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv98290 M 51 1 0 "" 21772 esv32823 1 84009192 84009436 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv93612,essv98097,essv99588 M 51 3 0 "" 21972,22217,22259 esv2133471 1 84044322 84044810 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4942227 M 1 0 1 MIR548AP NA18507 esv3743 1 84044435 84044702 CNV loss Wang_et_al_2008 18987735 Sequencing essv26184 M 1 0 1 MIR548AP YH nsv523508 1 84082781 84087342 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699279 M 2026 0 1 MIR548AP esv1612380 1 84130834 84130890 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3596406 M 2 0 1 MIR548AP,TTLL7 HuRef esv1339682 1 84131037 84131037 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3902609 M 2 1 0 MIR548AP,TTLL7 HuRef esv26427 1 84160949 84161528 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10079 M 40 0 1 TTLL7 NA18508 nsv823353 1 84236771 84237686 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431820 M 31 0 1 TTLL7 AK20 nsv1732 1 84271686 84317223 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6738,nssv9965,nssv1234,nssv10090,nssv2200,nssv5702 M 9 0 6 PRKACB NA12156,NA18507,NA18555,NA18956,NA19129,NA19240 nsv508360 1 84272818 84297585 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618978,nssv622770 M 4 0 2 "" NA10860,NA18994 esv2479910 1 84288798 84297395 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5286481 M 1 0 1 "" NA18507 esv988476 1 84289283 84298593 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564344 M 3 0 1 "" HuRef dgv3n16 1 84289565 84297825 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv435898,nsv436189 M 2 0 2 "" NA15510,NA18505 esv2456007 1 84289592 84297728 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5203624 M 1 0 1 "" NA18507 nsv511703 1 84289742 84298126 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626344 M 1 0 1 "" 1 esv8773 1 84290254 84297495 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31214 M 1 0 0 "" esv1935205 1 84290332 84297436 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4671024 M 1 0 1 "" NA18507 esv3939 1 84290484 84297278 CNV loss Wang_et_al_2008 18987735 Sequencing essv26380 M 1 0 1 "" YH nsv498674 1 84290513 84297232 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585386 M 9 0 1 "" esv3407621 1 84292853 84292853 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653243,essv8653244,essv8653245 M 185 3 0 "" NA19238,NA19239,NA19240 nsv546689 1 84303705 84443404 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718379 M 17421 1 0 PRKACB nsv546690 1 84334853 84427826 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718380 M 17421 1 0 PRKACB dgv206n100 1 84381934 84445447 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999772,nsv1005225,nsv997601,nsv1002537,nsv1013911 M 29084 0 5 PRKACB nsv830414 1 84409326 84597239 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447573 M 95 1 0 PRKACB,SAMD13 nsv1011105 1 84410974 84446864 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471116 M 29084 0 1 PRKACB nsv830426 1 84477512 84628817 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447584 M 95 1 0 SAMD13,UOX esv2527540 1 84482617 84489212 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5276218 M 1 0 1 "" NA18507 nsv436488 1 84483817 84488581 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466106 M 2 0 1 "" NA18505 esv2607567 1 84484000 84489171 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5346926 M 1 0 1 "" NA18507 esv28371 1 84484209 84488397 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20356 M 40 0 11 "" NA11894,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA19099,NA19190 esv5501 1 84484350 84488681 CNV loss Ahn_et_al_2009 19470904 Sequencing essv27942 M 1 0 0 "" nsv546691 1 84484359 84488222 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718381 M 17421 0 1 "" esv2121386 1 84484410 84488630 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4584030 M 1 0 1 "" NA18507 esv3878 1 84484558 84488532 CNV loss Wang_et_al_2008 18987735 Sequencing essv26319 M 1 0 1 "" YH dgv53n67 1 84484719 84488478 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823376,nsv823365 M 31 0 17 "" AK12,AK18,AK2,AK6,AK8,NA18537,NA18542,NA18552,NA18564,NA18566,NA18570,NA18942,NA18949,NA18951,NA18968,NA18969,NA18973 nsv819402 1 84484742 84488508 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419577 M 2 0 1 "" AK1 nsv546692 1 84486198 84487363 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718382 M 17421 0 1 "" dgv346n54 1 84486198 84488222 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546697,nsv546695,nsv546693,nsv546694,nsv546696,nsv546698 M 17421 0 60 "" esv2421602 1 84486421 84488030 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5157160,essv5100088,essv5053979,essv5120375,essv5153872,essv5123790,essv5125815,essv5090652,essv5078967,essv5082651,essv5094693,essv5016901,essv5022444,essv5115104,essv5125203,essv5091152,essv5061865,essv5115865,essv5117188,essv5042836,essv5032739,essv5155334,essv5113726,essv5014683,essv5060556,essv5013322,essv5071833,essv5131925,essv5156827,essv5056011,essv5034611,essv5006750,essv5109764,essv5157676,essv5137000,essv5130462,essv5137058,essv5080960,essv5041859,essv5066543,essv5003977,essv5081276,essv5053867,essv5039772,essv5075706,essv5149214,essv5130973,essv5121903,essv5076201,essv5040440,essv5101225,essv5009959,essv5082240,essv5057696,essv5036545,essv5077514,essv5159112,essv5011411,essv5138240,essv5157353,essv5028197,essv5122308,essv5042077,essv5071479,essv5142623,essv5062998,essv5033306,essv5151978,essv5032186,essv5074916,essv5014880,essv5029449,essv5154755,essv5086076,essv5061210,essv5029189,essv5083153,essv5008605,essv5066466,essv5018176,essv5034208,essv5035368,essv5127696,essv5129329,essv5158207,essv5062182,essv5138399,essv5141608,essv5018426,essv5043384,essv5130846,essv5145681,essv5023726,essv5007833,essv5139542,essv5003556,essv5083301,essv5090051,essv5009782,essv5158143,essv5130080,essv5066118,essv5080405,essv5139232,essv5052518,essv5099831,essv5155465,essv5023319,essv5065994,essv5115746,essv5155100,essv5112978,essv5114555,essv5131762,essv5083894,essv5035329,essv5072275,essv5104063,essv5030122,essv5022677,essv5140974,essv5147793,essv5156654,essv5040762,essv5131509,essv5130500,essv5150231,essv5004703,essv5131850,essv5053590,essv5101779,essv5077761,essv5063959,essv5055462,essv5149572,essv5069454,essv5048489,essv5023028,essv5145330,essv5082517,essv5118932,essv5140780,essv5036168,essv5086850,essv5085078,essv5113002,essv5103714,essv5018585,essv5019381,essv5124679,essv5070357,essv5021538,essv5115907,essv5078895,essv5058979,essv5008386,essv5087128,essv5108296,essv5015461,essv5138091,essv5084429,essv5052318,essv5025710,essv5132363,essv5011629,essv5039560,essv5046031,essv5132219,essv5142273,essv5061933,essv5041285,essv5149540,essv5143554,essv5099025,essv5013760,essv5025769,essv5114785,essv5073215,essv5010560,essv5112764,essv5142652,essv5061760,essv5146490,essv5039410,essv5016494,essv5113300,essv5069893,essv5118213,essv5086987,essv5088323,essv5145883,essv5079988,essv5070191,essv5099513,essv5118776,essv5089817,essv5086734,essv5105131,essv5085299,essv5152333,essv5081303,essv5046320,essv5104038,essv5139475,essv5067771,essv5024550,essv5078787,essv5142202,essv5159355,essv5011251,essv5069154,essv5027673,essv5120494,essv5082880,essv5091624,essv5122502,essv5010516,essv5025560,essv5110583,essv5032023,essv5158711,essv5044011,essv5002195,essv5099558,essv5132121,essv5065846,essv5060336,essv5143356,essv5042811,essv5156079,essv5038200,essv5047435,essv5042848,essv5099816,essv5075735,essv5033117,essv5011359,essv5129938,essv5063048,essv5062288,essv5008627,essv5059852,essv5078964,essv5135607,essv5043771,essv5157315,essv5087579,essv5149386,essv5141508,essv5010750,essv5104043,essv5026912,essv5087164,essv5084755,essv5139812,essv5144802,essv5150027,essv5057908,essv5137746,essv5031880,essv5005626,essv5104304,essv5013787,essv5099595,essv5123364,essv5035524,essv5138830,essv5030210,essv5092042,essv5090863,essv5090757,essv5094216,essv5079048,essv5116366,essv5020445,essv5068871,essv5106693,essv5072563,essv5107031,essv5028958,essv5093628,essv5042169,essv5034134,essv5139992,essv5144174,essv5140344,essv5020301,essv5051764,essv5015046,essv5075673,essv5033821,essv5005534,essv5134890,essv5057996,essv5112639,essv5086783,essv5046795,essv5081740,essv5044710,essv5054244,essv5038043,essv5147239,essv5035810,essv5013948,essv5074498,essv5081827,essv5092338,essv5134238,essv5091021,essv5092560,essv5040719,essv5144039,essv5155587,essv5069462,essv5076888,essv5108572,essv5146597,essv5011197,essv5082605,essv5146408,essv5115622,essv5067729,essv5130479,essv5056926,essv5028221,essv5032001,essv5139872,essv5069590,essv5011977,essv5141629,essv5026033,essv5030876,essv5018251,essv5046534,essv5023201,essv5049807,essv5043570,essv5002468,essv5126376,essv5125870,essv5095908,essv5025471,essv5032574,essv5086721,essv5087411,essv5117491,essv5093304,essv5049303,essv5053191,essv5146268,essv5061238,essv5106053,essv5042673,essv5013382,essv5016042,essv5145663,essv5127002,essv5105566,essv5156254,essv5084857,essv5033297,essv5127804,essv5149694,essv5051222,essv5083163,essv5041871,essv5109327,essv5051207,essv5113782,essv5083682,essv5019898,essv5120822,essv5064316,essv5025818,essv5003135,essv5142039,essv5145055,essv5030934,essv5101232,essv5078770,essv5010693,essv5119390,essv5126454,essv5137341,essv5091840,essv5122011,essv5001913,essv5147869,essv5062557,essv5039332,essv5106907,essv5072360,essv5155751,essv5060835,essv5105604,essv5076007,essv5056657,essv5128985,essv5147763,essv5139589,essv5035684,essv5149932,essv5078268,essv5081849,essv5098787,essv5080356,essv5131571,essv5115169,essv5045813,essv5071563,essv5042339,essv5036963,essv5002035,essv5039381,essv5085838,essv5065837,essv5013770,essv5007581,essv5094211,essv5011716,essv5140623,essv5147267,essv5024874,essv5140324,essv5002563,essv5049221,essv5091057,essv5113291,essv5022066,essv5131868,essv5133146,essv5131933,essv5022481,essv5156967,essv5019391,essv5032906,essv5004590,essv5161051,essv5027769,essv5008837,essv5055375,essv5158429,essv5108389,essv5122768,essv5044677,essv5153786,essv5095297,essv5023326,essv5052285,essv5085789,essv5004240,essv5013996 M 1184 0 452 "" NA10864,NA11843,NA11894,NA12282,NA12707,NA12716,NA12778,NA12864,NA12865,NA12873,NA12890,NA17962,NA17967,NA17968,NA17969,NA17970,NA17975,NA17977,NA17979,NA17981,NA17983,NA17987,NA17988,NA17989,NA17990,NA17993,NA17995,NA17996,NA17997,NA17998,NA18101,NA18102,NA18108,NA18112,NA18117,NA18118,NA18120,NA18124,NA18125,NA18129,NA18132,NA18134,NA18135,NA18136,NA18139,NA18141,NA18144,NA18146,NA18150,NA18152,NA18154,NA18159,NA18166,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18503,NA18504,NA18506,NA18507,NA18508,NA18511,NA18517,NA18518,NA18520,NA18524,NA18529,NA18532,NA18534,NA18537,NA18542,NA18545,NA18550,NA18552,NA18557,NA18558,NA18559,NA18561,NA18562,NA18564,NA18566,NA18570,NA18571,NA18572,NA18576,NA18577,NA18579,NA18595,NA18596,NA18597,NA18602,NA18603,NA18608,NA18610,NA18612,NA18614,NA18615,NA18617,NA18620,NA18623,NA18626,NA18627,NA18628,NA18630,NA18631,NA18633,NA18634,NA18637,NA18639,NA18647,NA18674,NA18682,NA18685,NA18694,NA18696,NA18740,NA18745,NA18747,NA18757,NA18853,NA18854,NA18855,NA18857,NA18858,NA18859,NA18860,NA18861,NA18862,NA18867,NA18868,NA18869,NA18873,NA18909,NA18910,NA18911,NA18914,NA18917,NA18923,NA18925,NA18934,NA18935,NA18939,NA18940,NA18942,NA18944,NA18945,NA18946,NA18948,NA18949,NA18951,NA18952,NA18953,NA18957,NA18960,NA18961,NA18965,NA18966,NA18967,NA18968,NA18969,NA18973,NA18975,NA18976,NA18977,NA18978,NA18979,NA18981,NA18991,NA18994,NA19002,NA19005,NA19027,NA19028,NA19031,NA19054,NA19055,NA19056,NA19058,NA19060,NA19062,NA19063,NA19064,NA19065,NA19066,NA19072,NA19075,NA19076,NA19077,NA19078,NA19079,NA19081,NA19083,NA19086,NA19087,NA19093,NA19099,NA19102,NA19103,NA19117,NA19119,NA19120,NA19131,NA19137,NA19139,NA19146,NA19148,NA19153,NA19154,NA19159,NA19161,NA19172,NA19173,NA19174,NA19176,NA19181,NA19182,NA19183,NA19185,NA19186,NA19189,NA19190,NA19191,NA19198,NA19201,NA19204,NA19213,NA19215,NA19239,NA19248,NA19249,NA19256,NA19308,NA19309,NA19311,NA19313,NA19324,NA19332,NA19334,NA19350,NA19352,NA19372,NA19375,NA19377,NA19384,NA19385,NA19391,NA19394,NA19396,NA19403,NA19428,NA19430,NA19431,NA19435,NA19437,NA19439,NA19440,NA19443,NA19446,NA19455,NA19456,NA19462,NA19469,NA19470,NA19471,NA19473,NA19649,NA19650,NA19657,NA19660,NA19661,NA19663,NA19664,NA19665,NA19669,NA19682,NA19685,NA19703,NA19708,NA19711,NA19714,NA19716,NA19718,NA19719,NA19720,NA19721,NA19722,NA19723,NA19725,NA19755,NA19759,NA19760,NA19761,NA19763,NA19770,NA19772,NA19774,NA19788,NA19789,NA19790,NA19795,NA19818,NA19900,NA19902,NA19908,NA19909,NA19917,NA19918,NA19919,NA19921,NA19982,NA20127,NA20289,NA20291,NA20294,NA20295,NA20302,NA20317,NA20319,NA20322,NA20332,NA20333,NA20341,NA20343,NA20346,NA20347,NA20348,NA20357,NA20360,NA20775,NA20783,NA20807,NA20845,NA20847,NA20849,NA20856,NA20869,NA20871,NA20873,NA20875,NA20876,NA20889,NA20892,NA20895,NA20901,NA20902,NA20903,NA21086,NA21089,NA21092,NA21098,NA21101,NA21102,NA21105,NA21111,NA21113,NA21115,NA21137,NA21141,NA21300,NA21301,NA21302,NA21303,NA21307,NA21316,NA21318,NA21320,NA21336,NA21344,NA21352,NA21353,NA21355,NA21356,NA21362,NA21367,NA21368,NA21370,NA21371,NA21379,NA21381,NA21382,NA21383,NA21387,NA21389,NA21390,NA21408,NA21415,NA21421,NA21423,NA21424,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21448,NA21453,NA21454,NA21475,NA21476,NA21477,NA21480,NA21485,NA21486,NA21488,NA21489,NA21490,NA21491,NA21493,NA21512,NA21517,NA21519,NA21521,NA21522,NA21523,NA21524,NA21525,NA21526,NA21527,NA21528,NA21573,NA21576,NA21577,NA21583,NA21587,NA21596,NA21600,NA21601,NA21615,NA21616,NA21619,NA21620,NA21631,NA21647,NA21678,NA21682,NA21717,NA21718,NA21733,NA21738,NA21739,NA21740,NA21741,NA21768 nsv546699 1 84486898 84488222 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718443 M 17421 0 1 "" nsv506941 1 84521939 84527939 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623276 M 4 0 0 "" NA18994 nsv1744 1 84587316 84619778 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6744 M 9 1 0 SAMD13,UOX NA12156 nsv830437 1 84610112 84773857 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1447595,nssv1447606 M 95 1 1 DNASE2B,GNG5,RPF1,UOX nsv823387 1 84649258 84649878 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437950 M 31 0 1 DNASE2B NA18951 esv26524 1 84668422 84672134 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13604 M 40 0 1 "" NA19099 nsv441698 1 84668621 84670569 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656682,nssv1656683 M 270 0 2 "" NA18859,NA19099 esv3303640 1 84685822 84685823 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7769659,essv7768249,essv7763964,essv7766186,essv7765383,essv7765109,essv7769983,essv7766854 M 185 8 0 "" NA07346,NA11881,NA11894,NA12043,NA12249,NA12812,NA12872,NA12873 esv3343817 1 84685852 84685871 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595379,essv9595390 M 185 2 0 "" NA11894,NA12043 esv1648734 1 84685862 84685862 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3610667 M 2 1 0 "" HuRef nsv946037 1 84736521 84737021 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773690,nssv1773727,nssv1773708,nssv1773776,nssv1773692,nssv1773734,nssv1773700,nssv1773744,nssv1773699,nssv1773724,nssv1773713,nssv1773723,nssv1773772,nssv1773689,nssv1773695,nssv1773721,nssv1773775,nssv1773759,nssv1773769,nssv1773780,nssv1773702,nssv1773781,nssv1773698,nssv1773740,nssv1773720,nssv1773726,nssv1773771,nssv1773735,nssv1773707,nssv1773756,nssv1773704,nssv1773761,nssv1773697,nssv1773764,nssv1773691,nssv1773755,nssv1773703,nssv1773742,nssv1773711,nssv1773757,nssv1773710,nssv1773747,nssv1773696,nssv1773712,nssv1773768,nssv1773731,nssv1773767,nssv1773737,nssv1773701,nssv1773752,nssv1773718,nssv1773784,nssv1773773,nssv1773715,nssv1773717,nssv1773779,nssv1773694,nssv1773743,nssv1773766,nssv1773762,nssv1773770,nssv1773745,nssv1773693,nssv1773719,nssv1773774,nssv1773748,nssv1773706,nssv1773733,nssv1773709,nssv1773741,nssv1773705,nssv1773754,nssv1773739,nssv1773753,nssv1773751,nssv1773749,nssv1773732,nssv1773783,nssv1773714,nssv1773736,nssv1773760,nssv1773738,nssv1773763,nssv1773777,nssv1773729,nssv1773722,nssv1773730,nssv1773725,nssv1773716,nssv1773782,nssv1773778,nssv1773728,nssv1773765,nssv1773785,nssv1773758,nssv1773746,nssv1773750 M 97 10 0 GNG5,RPF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1755 1 84744997 84780303 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1242 M 9 1 0 "" NA19240 nsv1000325 1 84805193 84873336 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480328 M 29084 1 0 C1orf180,CTBS esv3308575 1 84827142 84827143 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837288,essv7837794,essv7837031,essv7838826 M 185 4 0 "" NA12892,NA19238,NA19239,NA19240 esv3428758 1 84827142 84827151 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674139,essv8674138,essv8674137 M 185 3 0 "" NA19238,NA19239,NA19240 esv3306276 1 84827145 84827146 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7755106,essv7746095,essv7761790,essv7750149,essv7756147,essv7749694 M 185 6 0 "" NA18523,NA18870,NA19093,NA19238,NA19239,NA19240 esv3438420 1 84827145 84827175 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899953,essv8899952,essv8899954 M 185 3 0 "" NA18523,NA18870,NA19093 esv3893779 1 84861990 84889701 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788033 M 3017 1 0 C1orf180,SSX2IP nsv477593 1 84956034 84956034 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014858 M 9 1 0 "" NA18517 nsv516470 1 85012152 85013886 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv668576,nssv690492,nssv704475,nssv658797,nssv686856 M 2026 1 4 "" nsv830448 1 85066682 85263698 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447617,nssv1447629 M 95 0 2 LPAR3,MCOLN2,MCOLN3 nsv470724 1 85107376 85357848 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547750 M 443 1 0 LPAR3,MCOLN2,MCOLN3,WDR63 HGDP01029 nsv462383 1 85107376 85367054 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538558 M 1557 1 0 LPAR3,MCOLN2,MCOLN3,WDR63 HGDP01029 nsv546700 1 85107376 85367054 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173046 M 17421 1 0 LPAR3,MCOLN2,MCOLN3,WDR63 HGDP01029 nsv947434 1 85107503 85366723 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762673 M 97 1 0 LPAR3,MCOLN2,MCOLN3,WDR63 HGDP01029 nsv476715 1 85117153 85117153 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015739 M 9 1 0 LPAR3 NA12878 esv1124396 1 85160734 85160734 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4366379 M 2 1 0 "" HuRef esv3360051 1 85164981 85165000 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595401 M 185 1 0 MCOLN2 NA19141 nsv521770 1 85311535 85312392 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694537 M 2026 0 1 WDR63 nsv523150 1 85311535 85313752 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698858 M 2026 0 1 WDR63 esv2763574 1 85311715 85315208 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032335 M 1109 0 1 WDR63 SW_1416 esv34165 1 85314628 85618837 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990733 M 270 0 0 BCL10,C1orf52,DDAH1,LOC646626,MIR4423,SYDE2,WDR63 nsv830459 1 85362173 85558899 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447640 M 95 0 1 BCL10,C1orf52,DDAH1,LOC646626,MIR4423,SYDE2,WDR63 esv2617162 1 85392274 85393025 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5320527 M 1 1 0 "" NA18507 dgv347n54 1 85435439 85439974 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546701,nsv546702 M 17421 0 2 SYDE2 esv3329522 1 85437977 85437997 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863722 M 185 1 0 SYDE2 NA18871 esv23473 1 85438779 85440284 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17132 M 40 0 2 SYDE2 NA12156,NA12489 dgv348n54 1 85438858 85439776 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546704,nsv546703 M 17421 0 3 SYDE2 nsv546706 1 85438858 85439893 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718450,nssv718452,nssv718451 M 17421 2 1 SYDE2 dgv349n54 1 85438858 85439974 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546714,nsv546705,nsv546713,nsv546711,nsv546712,nsv546710,nsv546717,nsv546718,nsv546716,nsv546707 M 17421 15 0 SYDE2 dgv350n54 1 85438858 85440145 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546708,nsv546715 M 17421 2 0 SYDE2 nsv546709 1 85438858 85440196 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718457 M 17421 0 1 SYDE2 dgv351n54 1 85439213 85439974 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546719,nsv546720 M 17421 3 0 SYDE2 nsv523891 1 85454849 85455180 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699734 M 2026 0 1 "" nsv475692 1 85496749 85496749 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015806 M 9 1 0 C1orf52 NA12878 esv2574928 1 85520851 85522497 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5229260 M 1 0 1 "" NA18507 esv8174 1 85520956 85521808 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30615 M 1 0 0 "" dgv2e194 1 85521006 85521742 CNV deletion Bentley_et_al_2008 18987734 Sequencing esv2065463,esv2304016 M 1 0 1 "" NA18507 esv1008164 1 85521036 85522281 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565455 M 3 0 1 "" HuRef esv3232 1 85521125 85521666 CNV loss Wang_et_al_2008 18987735 Sequencing essv25673 M 1 0 1 "" YH esv1010849 1 85521210 85521539 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570793 M 3 0 1 "" HuRef esv1266887 1 85521222 85521552 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4138331 M 2 0 1 "" HuRef nsv830470 1 85593363 85786668 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447651 M 95 0 1 DDAH1 nsv1008877 1 85615826 85670158 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482346 M 29084 1 0 DDAH1 nsv1766 1 85650741 85683808 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7335 M 9 1 0 DDAH1 NA12156 nsv441699 1 85683879 85687990 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656684,nssv1656685 M 270 0 2 DDAH1 NA18620,NA18959 nsv821007 1 85745063 85779087 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420414 M 1 1 0 DDAH1 NA10851 nsv823398 1 85745063 85779087 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1427264 M 31 0 1 DDAH1 AK8 nsv946038 1 85745151 85778419 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773788,nssv1773791,nssv1773793,nssv1773794,nssv1773792,nssv1773786,nssv1773795,nssv1773796,nssv1773787,nssv1773790,nssv1773789 M 97 10 0 DDAH1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv21828 1 85746606 85778249 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10272 M 40 2 0 DDAH1 NA15510,NA19114 esv2647869 1 85747031 85778417 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5288249 M 1 1 0 DDAH1 NA18507 nsv436030 1 85755226 85777102 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466117 M 2 1 0 DDAH1 NA15510 esv2440186 1 85765270 85766664 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5236752 M 1 0 1 DDAH1 NA18507 nsv1000290 1 85851083 85877967 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464217 M 29084 0 1 "" nsv509369 1 85919821 85955612 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623786 M 4 1 0 ZNHIT6 NA18994 nsv506942 1 85946074 85952074 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620661 M 4 0 0 ZNHIT6 NA15510 nsv546721 1 85998940 86165165 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718473 M 17421 1 0 COL24A1 nsv476381 1 86016096 86016096 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016001 M 9 1 0 COL24A1 NA12878 nsv1011293 1 86043237 86189560 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699596 M 29084 0 1 COL24A1 nsv546722 1 86050903 86663661 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718474 M 17421 0 1 CLCA2,COL24A1,MIR7856,ODF2L esv25228 1 86069229 86070139 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15952 M 40 0 2 COL24A1 NA11894,NA15510 dgv352n54 1 86069251 86070083 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546725,nsv546723,nsv546724 M 17421 0 14 COL24A1 nsv823409 1 86115426 86125151 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436346 M 31 0 1 COL24A1 NA18542 nsv462395 1 86152102 86229922 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538568 M 1557 1 0 COL24A1 HGDP01345 nsv546726 1 86152102 86229922 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173047 M 17421 1 0 COL24A1 HGDP01345 nsv546727 1 86154238 86189313 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718489 M 17421 0 1 COL24A1 nsv522304 1 86158464 86174832 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695085 M 2026 1 0 COL24A1 dgv353n54 1 86158464 86177084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546728,nsv546729 M 17421 0 4 COL24A1 nsv437701 1 86158464 86188931 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467582 M 60 0 1 COL24A1 NA12753 dgv354n54 1 86165165 86179723 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546735,nsv546732,nsv546734,nsv546733,nsv546730,nsv546731 M 17421 0 24 COL24A1 nsv10350 1 86173149 86177434 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv17418,nssv15771,nssv18754,nssv17414,nssv14096,nssv15437 M 31 0 6 COL24A1 NA10839,NA18517,NA18563,NA18564,NA18860,NA19007 dgv54n67 1 86173280 86177332 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823453,nsv823420,nsv823431,nsv823442 M 31 0 12 COL24A1 AK12,AK16,AK18,AK8,NA18526,NA18542,NA18547,NA18564,NA18592,NA18968,NA18973,NA18999 nsv819896 1 86173303 86177711 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419635 M 2 0 1 COL24A1 AK1 esv23326 1 86173335 86177263 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10764 M 40 0 5 COL24A1 NA07037,NA12004,NA12414,NA18517,NA19225 esv4489 1 86173388 86177299 CNV loss Wang_et_al_2008 18987735 Sequencing essv26930 M 1 0 1 COL24A1 YH nsv508371 1 86173412 86203435 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617500 M 4 0 1 COL24A1 CHM nsv546736 1 86174773 86175893 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718519,nssv718518 M 17421 0 2 COL24A1 dgv355n54 1 86174773 86176404 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546739,nsv546737,nsv546749,nsv546738 M 17421 0 5 COL24A1 dgv356n54 1 86174773 86177084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546746,nsv546748,nsv546755,nsv546740,nsv546745,nsv546742,nsv546751,nsv546750,nsv546741,nsv546747,nsv546752,nsv546753 M 17421 0 197 COL24A1 nsv546743 1 86174773 86179723 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718665,nssv718664,nssv718667,nssv718666 M 17421 0 4 COL24A1 nsv546744 1 86174773 86184765 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718668 M 17421 0 1 COL24A1 esv2421338 1 86174832 86176913 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5080571,essv5027971,essv5128112,essv5098335,essv5045293,essv5140010,essv5084107,essv5087907,essv5159007,essv5056975,essv5037010,essv5111378,essv5128822,essv5076002,essv5127527,essv5112952,essv5121670,essv5059476,essv5149754,essv5133137,essv5062106,essv5104267,essv5058103,essv5092647,essv5057205,essv5079786,essv5075225,essv5127185,essv5005077,essv5160495,essv5045093,essv5073605,essv5112176,essv5073071,essv5041234,essv5059266,essv5140728,essv5103328,essv5104499,essv5129704,essv5147609,essv5085176,essv5130101,essv5056574,essv5038716,essv5048835,essv5077637,essv5024006,essv5023338,essv5062114,essv5106196,essv5050216,essv5010623,essv5017974,essv5029790,essv5145793,essv5093280,essv5129927,essv5034747,essv5118295,essv5098496,essv5039552,essv5106505,essv5140469,essv5061955,essv5108998,essv5142037,essv5010272,essv5136831,essv5093326,essv5118730,essv5103151,essv5085228,essv5004665,essv5146950,essv5054096,essv5093994,essv5100316,essv5034235,essv5044643,essv5085696,essv5141969,essv5065323,essv5027724,essv5087513,essv5078118,essv5010698,essv5003627,essv5056546,essv5022781,essv5006017,essv5042552,essv5118737,essv5057045,essv5090976,essv5098529,essv5022057,essv5122825,essv5038130,essv5104889,essv5034520,essv5074500,essv5073666,essv5110383,essv5061384,essv5146566,essv5094940,essv5079219,essv5009127,essv5086913,essv5082407,essv5149980,essv5121838,essv5020410,essv5100276,essv5093008,essv5091087,essv5047652,essv5123005,essv5103767,essv5072226,essv5027742,essv5132440,essv5125124,essv5074191,essv5019606,essv5079930,essv5063669,essv5141474,essv5077561,essv5156403,essv5121620,essv5054019,essv5111574,essv5104661,essv5007803,essv5086718,essv5087303,essv5155129,essv5112306,essv5116947,essv5158926,essv5106048,essv5087719,essv5033950,essv5066603,essv5020876,essv5075002,essv5155165,essv5117387,essv5003031,essv5043234,essv5056872,essv5003611,essv5080124,essv5071552,essv5064385,essv5070715,essv5114763,essv5145422,essv5091104,essv5037580,essv5152381,essv5030580,essv5135844,essv5141988,essv5147072,essv5134641,essv5017572,essv5128936,essv5139956,essv5093052,essv5078170,essv5153669,essv5120153,essv5021315,essv5079948,essv5018389,essv5066117,essv5123952,essv5157489,essv5025210,essv5088412,essv5043255,essv5028624,essv5098254,essv5110922,essv5053364,essv5003023,essv5075568,essv5129081,essv5153305,essv5095821,essv5043834,essv5071079,essv5158613,essv5069860,essv5123179,essv5115712,essv5095756,essv5108041,essv5074514,essv5127037,essv5069319,essv5155012,essv5038357,essv5064217,essv5158698,essv5111573,essv5090990,essv5036618,essv5036486,essv5045576,essv5157325,essv5062274,essv5069962,essv5036019,essv5049454,essv5129234,essv5031234,essv5137538,essv5129888,essv5159176,essv5128994,essv5019389,essv5067730,essv5072394,essv5080984,essv5142257,essv5105515,essv5116722,essv5064144,essv5055114,essv5092150,essv5161002,essv5040937,essv5136615,essv5141743,essv5062778,essv5030386,essv5090171,essv5072781,essv5069470,essv5148507,essv5152179,essv5020614,essv5105170,essv5030458,essv5141430,essv5089572,essv5046218,essv5158757,essv5108252,essv5138966,essv5022934,essv5022335,essv5155614,essv5045339,essv5054610,essv5075353,essv5035370,essv5057417,essv5070996,essv5020842,essv5091273,essv5100213,essv5040165,essv5034452,essv5005641,essv5049140,essv5136391,essv5061787,essv5040602,essv5086367,essv5055915,essv5077634,essv5010082,essv5095594,essv5048441,essv5095759,essv5102420,essv5075783,essv5097245,essv5052230,essv5116487,essv5063599,essv5136110,essv5068944,essv5146402,essv5160055,essv5067678,essv5160160,essv5050847,essv5141801,essv5090090,essv5154514,essv5059376,essv5044367,essv5037737,essv5134135,essv5109688,essv5145495,essv5157122,essv5105282,essv5010096,essv5010783,essv5125565,essv5149792,essv5099591,essv5116921,essv5008850,essv5157268,essv5044199,essv5128668,essv5080067,essv5017191 M 1184 0 316 COL24A1 NA06986,NA06997,NA07037,NA10837,NA10838,NA10839,NA10859,NA10865,NA11891,NA11892,NA11918,NA11930,NA12005,NA12144,NA12273,NA12335,NA12340,NA12347,NA12753,NA12760,NA12762,NA12767,NA12777,NA12813,NA12864,NA12873,NA12891,NA17962,NA17966,NA17969,NA17976,NA17980,NA17981,NA17996,NA17999,NA18101,NA18105,NA18107,NA18112,NA18117,NA18120,NA18127,NA18129,NA18131,NA18132,NA18134,NA18135,NA18138,NA18139,NA18140,NA18143,NA18146,NA18149,NA18159,NA18160,NA18484,NA18486,NA18515,NA18517,NA18524,NA18526,NA18534,NA18542,NA18544,NA18546,NA18550,NA18563,NA18564,NA18579,NA18593,NA18596,NA18599,NA18602,NA18603,NA18611,NA18614,NA18619,NA18620,NA18622,NA18631,NA18632,NA18633,NA18638,NA18641,NA18642,NA18643,NA18745,NA18748,NA18859,NA18860,NA18874,NA18910,NA18939,NA18943,NA18944,NA18945,NA18946,NA18948,NA18952,NA18954,NA18955,NA18957,NA18962,NA18963,NA18964,NA18967,NA18968,NA18971,NA18973,NA18974,NA18977,NA18979,NA18981,NA18987,NA18990,NA18994,NA18999,NA19000,NA19005,NA19007,NA19009,NA19010,NA19058,NA19059,NA19062,NA19076,NA19077,NA19079,NA19086,NA19088,NA19095,NA19097,NA19113,NA19116,NA19130,NA19159,NA19178,NA19189,NA19191,NA19201,NA19203,NA19204,NA19223,NA19224,NA19225,NA19309,NA19310,NA19318,NA19324,NA19327,NA19332,NA19359,NA19371,NA19373,NA19374,NA19376,NA19380,NA19384,NA19391,NA19394,NA19396,NA19440,NA19445,NA19466,NA19474,NA19625,NA19649,NA19650,NA19657,NA19659,NA19663,NA19676,NA19712,NA19713,NA19716,NA19719,NA19725,NA19747,NA19748,NA19756,NA19759,NA19760,NA19761,NA19774,NA19779,NA19781,NA19782,NA19783,NA19788,NA19790,NA19818,NA19834,NA19835,NA19836,NA19901,NA19909,NA19919,NA19983,NA20301,NA20302,NA20334,NA20335,NA20344,NA20348,NA20350,NA20505,NA20506,NA20508,NA20527,NA20531,NA20534,NA20539,NA20540,NA20542,NA20544,NA20753,NA20756,NA20758,NA20761,NA20765,NA20771,NA20783,NA20786,NA20790,NA20792,NA20804,NA20806,NA20807,NA20808,NA20812,NA20818,NA20819,NA20826,NA20845,NA20849,NA20850,NA20852,NA20854,NA20856,NA20859,NA20861,NA20862,NA20866,NA20871,NA20872,NA20873,NA20876,NA20877,NA20883,NA20885,NA20887,NA20888,NA20894,NA20902,NA20903,NA20906,NA20908,NA20911,NA21090,NA21091,NA21092,NA21094,NA21097,NA21098,NA21100,NA21101,NA21102,NA21104,NA21105,NA21107,NA21109,NA21111,NA21113,NA21117,NA21118,NA21123,NA21125,NA21137,NA21143,NA21144,NA21295,NA21300,NA21307,NA21308,NA21309,NA21352,NA21363,NA21378,NA21381,NA21383,NA21384,NA21386,NA21388,NA21389,NA21408,NA21415,NA21417,NA21441,NA21448,NA21451,NA21478,NA21509,NA21517,NA21528,NA21529,NA21573,NA21577,NA21597,NA21611,NA21614,NA21619,NA21620,NA21683,NA21686,NA21717,NA21718 nsv433165 1 86174832 86176913 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463046 M 9 0 1 COL24A1 NA18517 nsv437871 1 86175057 86177084 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv471590,nssv471579 M 269 0 2 COL24A1 NA12753,NA12762 nsv546754 1 86175336 86176617 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718725 M 17421 0 1 COL24A1 nsv546756 1 86175595 86177084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718729,nssv718728 M 17421 0 2 COL24A1 esv2595836 1 86177736 86179181 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5370760 M 1 0 1 COL24A1 NA18507 nsv511704 1 86178086 86178908 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626345 M 1 0 1 COL24A1 1 esv8255 1 86178120 86178955 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30696 M 1 0 0 COL24A1 esv2075404 1 86178196 86178903 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4939520 M 1 0 1 COL24A1 NA18507 esv3715 1 86178348 86178857 CNV loss Wang_et_al_2008 18987735 Sequencing essv26156 M 1 0 1 COL24A1 YH esv995781 1 86178383 86178710 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571155 M 3 0 1 COL24A1 HuRef esv1017473 1 86178393 86178721 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4294523 M 2 0 1 COL24A1 HuRef nsv462406 1 86184765 86282584 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538575 M 1557 1 0 COL24A1 HGDP01198 nsv546757 1 86184765 86282584 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173048 M 17421 1 0 COL24A1 HGDP01198 esv7008 1 86192689 86192839 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29449 M 1 0 0 COL24A1 nsv546758 1 86210915 86256220 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718730 M 17421 0 1 COL24A1 nsv474425 1 86214828 86214828 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017880 M 9 1 0 COL24A1 NA18956 nsv1012808 1 86228298 86243077 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699597 M 29084 0 1 COL24A1 nsv525678 1 86260502 86322086 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701836 M 2026 0 1 COL24A1 esv1008311 1 86320194 86320960 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587264 M 3 0 1 COL24A1 HuRef nsv830481 1 86322862 86509878 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447662 M 95 1 0 COL24A1 nsv506943 1 86343780 86349780 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619241 M 4 0 0 COL24A1 NA10860 esv2763578 1 86357283 86394873 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032346 M 1109 1 0 COL24A1 SW_0103 nsv1002541 1 86461676 86678490 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699598 M 29084 1 0 CLCA2,MIR7856,ODF2L esv3371999 1 86469518 86469537 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899961,essv8899955,essv8899957,essv8899960,essv8899956,essv8899958,essv8899962 M 185 7 0 "" NA18537,NA18558,NA18571,NA18577,NA18638,NA18952,NA18960 esv3305350 1 86469525 86469526 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7752275,essv7748146,essv7756508,essv7748612,essv7754210,essv7762410,essv7748879 M 185 7 0 "" NA18537,NA18558,NA18571,NA18577,NA18638,NA18952,NA18960 dgv7n21 1 86476779 86479953 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv525420,nsv525653 M 2026 0 2 "" nsv525045 1 86487318 86490462 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701090 M 2026 0 1 "" esv2551120 1 86513192 86515239 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5271255 M 1 0 1 "" NA18507 nsv511705 1 86513319 86514903 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626346 M 1 0 1 "" 1 esv8990 1 86513349 86514535 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31431 M 1 0 0 "" esv4649 1 86513521 86514352 CNV loss Wang_et_al_2008 18987735 Sequencing essv27090 M 1 0 1 "" YH esv1466406 1 86513574 86514291 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4028644 M 2 0 1 "" HuRef nsv521366 1 86689355 86694749 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697976 M 2026 0 1 CLCA2 nsv946039 1 86739244 86743051 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774738,nssv1774744,nssv1774745,nssv1774773,nssv1774752,nssv1774817,nssv1774737,nssv1774785,nssv1774740,nssv1774760,nssv1774735,nssv1774756,nssv1774804,nssv1774758,nssv1774805,nssv1774784,nssv1774731,nssv1774813,nssv1774798,nssv1774780,nssv1774807,nssv1774796,nssv1774729,nssv1774764,nssv1773798,nssv1774789,nssv1774806,nssv1774809,nssv1774801,nssv1774791,nssv1774727,nssv1774815,nssv1774739,nssv1774816,nssv1774730,nssv1774765,nssv1774724,nssv1774769,nssv1774725,nssv1774776,nssv1774736,nssv1774797,nssv1774750,nssv1774762,nssv1774728,nssv1774751,nssv1774733,nssv1774755,nssv1774742,nssv1774774,nssv1774732,nssv1774793,nssv1774741,nssv1774777,nssv1774803,nssv1774753,nssv1773799,nssv1773797,nssv1774743,nssv1774783,nssv1774799,nssv1774794,nssv1774800,nssv1774788,nssv1774734,nssv1774775,nssv1774749,nssv1774748,nssv1774802,nssv1774790,nssv1774726,nssv1774782,nssv1774763,nssv1774759,nssv1774771,nssv1774787,nssv1774757,nssv1774767,nssv1774811,nssv1774754,nssv1774761,nssv1774812,nssv1774746,nssv1774795,nssv1774781,nssv1774792,nssv1774778,nssv1774808,nssv1774766,nssv1774810,nssv1774786,nssv1774770,nssv1774779,nssv1774768,nssv1774814,nssv1774772,nssv1774747 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946040 1 86743551 86746646 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774829,nssv1774869,nssv1774838,nssv1774844,nssv1774827,nssv1774862,nssv1774895,nssv1774867,nssv1774842,nssv1774858,nssv1774826,nssv1774853,nssv1774832,nssv1774889,nssv1774837,nssv1774905,nssv1774839,nssv1774909,nssv1774901,nssv1774883,nssv1774820,nssv1774870,nssv1774823,nssv1774907,nssv1774834,nssv1774874,nssv1774900,nssv1774860,nssv1774819,nssv1774868,nssv1774835,nssv1774854,nssv1774849,nssv1774863,nssv1774846,nssv1774881,nssv1774828,nssv1774841,nssv1774904,nssv1774855,nssv1774821,nssv1774877,nssv1774836,nssv1774865,nssv1774833,nssv1774872,nssv1774822,nssv1774882,nssv1774831,nssv1774888,nssv1774898,nssv1774893,nssv1774899,nssv1774914,nssv1774847,nssv1774857,nssv1774825,nssv1774886,nssv1774830,nssv1774873,nssv1774824,nssv1774876,nssv1774840,nssv1774913,nssv1774902,nssv1774850,nssv1774896,nssv1774911,nssv1774897,nssv1774861,nssv1774903,nssv1774894,nssv1774890,nssv1774891,nssv1774908,nssv1774912,nssv1774866,nssv1774880,nssv1774887,nssv1774885,nssv1774879,nssv1774848,nssv1774859,nssv1774845,nssv1774851,nssv1774856,nssv1774864,nssv1774818,nssv1774843,nssv1774906,nssv1774878,nssv1774852,nssv1774884,nssv1774871,nssv1774910,nssv1774875,nssv1774892 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546759 1 86781119 86806822 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718731 M 17421 0 1 CLCA4 esv2761188 1 86785517 86875876 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032368,essv7032357 M 1109 1 1 CLCA3P,CLCA4 SW_0159,SW_1048 nsv823464 1 86785526 86787428 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437685 M 31 0 1 CLCA4 NA18547 nsv546760 1 86787248 86872826 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718732 M 17421 1 0 CLCA3P,CLCA4 nsv546761 1 86801257 86803428 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718733 M 17421 0 1 CLCA4 dgv357n54 1 86801257 86809334 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546763,nsv546768,nsv546762 M 17421 0 11 CLCA4 nsv546764 1 86802570 86803846 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718741 M 17421 0 1 CLCA4 dgv358n54 1 86802570 86804912 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546766,nsv546770,nsv546765,nsv546769 M 17421 0 7 CLCA4 nsv546767 1 86802570 86806822 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718747 M 17421 0 1 CLCA4 nsv546771 1 86803846 86809334 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718754 M 17421 0 1 CLCA4 nsv473279 1 86898701 86898701 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011317 M 9 1 0 "" NA19129 esv3450665 1 86902933 86904320 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808981 M 185 0 0 "" NA12878 nsv946041 1 87016940 87027529 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773860,nssv1773849,nssv1774928,nssv1773824,nssv1773858,nssv1773845,nssv1774918,nssv1773868,nssv1774924,nssv1773816,nssv1774939,nssv1774940,nssv1773859,nssv1773864,nssv1774935,nssv1773814,nssv1774931,nssv1773844,nssv1774916,nssv1773850,nssv1773855,nssv1774949,nssv1774944,nssv1773840,nssv1774929,nssv1773830,nssv1774932,nssv1774915,nssv1774923,nssv1773836,nssv1774925,nssv1773869,nssv1774917,nssv1773863,nssv1774933,nssv1773842,nssv1774946,nssv1773871,nssv1774919,nssv1773832,nssv1773861,nssv1773829,nssv1773852,nssv1773819,nssv1774943,nssv1774941,nssv1774922,nssv1774938,nssv1774927,nssv1774951,nssv1773853,nssv1773815,nssv1773857,nssv1773813,nssv1773856,nssv1773851,nssv1773854,nssv1773847,nssv1774921,nssv1773841,nssv1774926,nssv1773833,nssv1774937,nssv1773826,nssv1774930,nssv1773823,nssv1774934,nssv1773848,nssv1774920,nssv1773828,nssv1774936,nssv1773838,nssv1773866,nssv1773862,nssv1774942,nssv1773867,nssv1773843,nssv1773821,nssv1773865,nssv1774952,nssv1774950,nssv1773839,nssv1773817,nssv1773870,nssv1773834,nssv1773818,nssv1773820,nssv1773827,nssv1773825,nssv1773846,nssv1773837,nssv1774948,nssv1774947,nssv1773822,nssv1773835,nssv1774945,nssv1773831 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1437158 1 87035639 87035639 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4332147 M 2 1 0 "" HuRef esv1564894 1 87035961 87035961 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3869134 M 2 1 0 "" HuRef nsv1777 1 87075739 87110376 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2994 M 9 1 0 SEP15 NA18555 esv1340746 1 87138812 87138812 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4111922 M 2 1 0 SEP15 HuRef nsv473936 1 87144002 87144002 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013919 M 9 1 0 SEP15 NA12156 esv1704081 1 87223672 87223738 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3834377 M 2 0 1 HS2ST1 HuRef nsv480090 1 87246912 87246912 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015029 M 9 0 0 HS2ST1 nsv473952 1 87247267 87247267 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016833 M 9 1 0 HS2ST1 NA12156 nsv477430 1 87254959 87254959 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012674 M 9 1 0 HS2ST1 NA18517 esv3363301 1 87261738 87261744 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863723,essv7863724 M 185 2 0 HS2ST1 NA11992,NA18522 nsv509380 1 87262135 87298802 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621097 M 4 1 0 HS2ST1 NA15510 esv1002791 1 87275467 87275467 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583926 M 3 1 0 HS2ST1 HuRef dgv134e59 1 87275478 87275555 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302835,esv3302561 M 185 8 0 HS2ST1 NA10851,NA12878,NA18582,NA18942,NA18965,NA19005,NA19093,NA19138 esv3385507 1 87275491 87275545 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670921 M 185 1 0 HS2ST1 NA12878 esv1375917 1 87275541 87275541 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4194224 M 2 1 0 HS2ST1 HuRef nsv946042 1 87282336 87283834 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773896,nssv1773934,nssv1773873,nssv1773963,nssv1773883,nssv1773924,nssv1773949,nssv1773962,nssv1773955,nssv1773945,nssv1773954,nssv1773897,nssv1773957,nssv1773916,nssv1773888,nssv1773932,nssv1773901,nssv1773921,nssv1773884,nssv1773928,nssv1773893,nssv1773936,nssv1773953,nssv1773905,nssv1773892,nssv1773927,nssv1773952,nssv1773960,nssv1773874,nssv1773961,nssv1773880,nssv1773899,nssv1773890,nssv1773941,nssv1773885,nssv1773938,nssv1773881,nssv1773917,nssv1773879,nssv1773902,nssv1773894,nssv1773904,nssv1773887,nssv1773908,nssv1773958,nssv1773933,nssv1773900,nssv1773937,nssv1773886,nssv1773942,nssv1773875,nssv1773913,nssv1773878,nssv1773965,nssv1773956,nssv1773939,nssv1773891,nssv1773922,nssv1773882,nssv1773919,nssv1773950,nssv1773911,nssv1773951,nssv1773872,nssv1773876,nssv1773944,nssv1773877,nssv1773966,nssv1773903,nssv1773910,nssv1773889,nssv1773930,nssv1773968,nssv1773964,nssv1773926,nssv1773912,nssv1773906,nssv1773909,nssv1773923,nssv1773929,nssv1773959,nssv1773907,nssv1773918,nssv1773946,nssv1773920,nssv1773948,nssv1773940,nssv1773915,nssv1773898,nssv1773914,nssv1773947,nssv1773935,nssv1773895,nssv1773967,nssv1773931,nssv1773925,nssv1773943 M 97 10 0 HS2ST1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1005148 1 87282552 87285023 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565727 M 3 1 0 HS2ST1 HuRef nsv512744 1 87284861 87285084 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625371 M 1 1 0 HS2ST1 1 esv28524 1 87296221 87297034 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14712 M 40 0 1 HS2ST1 NA18517 esv2476077 1 87331496 87332557 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5196239 M 1 1 0 HS2ST1 NA18507 esv3344383 1 87332134 87332162 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8899965,essv8899966,essv8899963,essv8899964 M 185 4 0 HS2ST1 NA18507,NA18912,NA19147,NA19257 esv3307121 1 87332142 87332143 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7751428,essv7745589,essv7756485,essv7750688 M 185 4 0 HS2ST1 NA18507,NA18912,NA19147,NA19257 esv23870 1 87352996 87386846 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11592,esv16675 M 40 6 0 LINC01140 NA11993,NA12156,NA12414,NA18858,NA19147,NA19257 nsv1788 1 87379337 87395992 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10101 M 9 1 0 LINC01140 NA18956 nsv437812 1 87405608 87416535 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467693 M 60 0 1 LINC01140 NA10855 nsv437882 1 87409982 87412646 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv471612,nssv471601 M 269 0 2 "" NA10855,NA11831 esv3412890 1 87467922 87467932 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863725 M 185 1 0 "" NA12005 nsv522243 1 87484480 87493441 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695023 M 2026 0 1 "" nsv517578 1 87493441 87507691 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv679264,nssv701135,nssv679722,nssv652421,nssv678000 M 2026 0 5 "" nsv476746 1 87524161 87524161 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011969 M 9 1 0 "" NA12878 nsv1799 1 87529584 87560902 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10104 M 9 1 0 "" NA18956 esv24748 1 87568971 87569605 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13165 M 40 1 0 LMO4 NA19225 esv3893790 1 87606847 87617699 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797134 M 3017 0 1 LOC100505768 nsv946043 1 87658162 87676649 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1773981,nssv1774056,nssv1773979,nssv1773992,nssv1773980,nssv1774011,nssv1774046,nssv1773995,nssv1773993,nssv1774037,nssv1774052,nssv1774016,nssv1773988,nssv1774006,nssv1773998,nssv1774032,nssv1774054,nssv1774061,nssv1774000,nssv1774057,nssv1773985,nssv1774040,nssv1773970,nssv1774028,nssv1773987,nssv1774017,nssv1774051,nssv1774012,nssv1773973,nssv1774064,nssv1774049,nssv1774022,nssv1773982,nssv1774059,nssv1773976,nssv1774038,nssv1773991,nssv1774063,nssv1773983,nssv1774044,nssv1774050,nssv1774029,nssv1773978,nssv1774065,nssv1774048,nssv1774031,nssv1774047,nssv1774013,nssv1773989,nssv1774024,nssv1774055,nssv1774002,nssv1773997,nssv1774033,nssv1773975,nssv1774039,nssv1773972,nssv1774021,nssv1773977,nssv1774058,nssv1773984,nssv1774035,nssv1773974,nssv1774060,nssv1773990,nssv1774045,nssv1773986,nssv1774019,nssv1773971,nssv1774001,nssv1774053,nssv1774008,nssv1774036,nssv1774010,nssv1774025,nssv1773994,nssv1774030,nssv1773996,nssv1774014,nssv1773999,nssv1774007,nssv1774041,nssv1773969,nssv1774027,nssv1774005,nssv1774018,nssv1774009,nssv1774034,nssv1774043,nssv1774042,nssv1774026,nssv1774003,nssv1774020,nssv1774062,nssv1774023,nssv1774015,nssv1774004 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv518195 1 87665377 87675612 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695619 M 2026 0 1 "" nsv946044 1 87686429 87690922 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774085,nssv1775498,nssv1774095,nssv1775511,nssv1774083,nssv1774096,nssv1774090,nssv1775517,nssv1774076,nssv1775499,nssv1775506,nssv1775478,nssv1775504,nssv1774104,nssv1774086,nssv1775495,nssv1774081,nssv1775465,nssv1775505,nssv1774089,nssv1775508,nssv1774066,nssv1774094,nssv1775494,nssv1775507,nssv1774105,nssv1774068,nssv1774092,nssv1774097,nssv1775483,nssv1775500,nssv1774106,nssv1774087,nssv1775467,nssv1774084,nssv1775515,nssv1774074,nssv1775466,nssv1774072,nssv1775516,nssv1774070,nssv1775474,nssv1774082,nssv1774101,nssv1774078,nssv1775492,nssv1775509,nssv1775510,nssv1774069,nssv1775496,nssv1774073,nssv1775518,nssv1774067,nssv1775487,nssv1774079,nssv1775486,nssv1774088,nssv1775519,nssv1774080,nssv1774103,nssv1774075,nssv1774102,nssv1775503,nssv1775490,nssv1774071,nssv1775470,nssv1775501,nssv1775489,nssv1774077,nssv1775497,nssv1775502,nssv1775513,nssv1775472,nssv1775477,nssv1775488,nssv1775485,nssv1775481,nssv1775475,nssv1775479,nssv1775484,nssv1775469,nssv1774107,nssv1774100,nssv1775476,nssv1775514,nssv1775493,nssv1775491,nssv1774099,nssv1775482,nssv1774098,nssv1775468,nssv1774093,nssv1775480,nssv1774091,nssv1775512,nssv1775473,nssv1775471 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946046 1 87712088 87738567 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775572,nssv1775609,nssv1775634,nssv1775626,nssv1775568,nssv1775632,nssv1775638,nssv1775603,nssv1775579,nssv1775616,nssv1775570,nssv1775604,nssv1775639,nssv1775593,nssv1775588,nssv1775597,nssv1775578,nssv1775583,nssv1775566,nssv1775611,nssv1775643,nssv1775598,nssv1775581,nssv1775628,nssv1775565,nssv1775645,nssv1775560,nssv1775619,nssv1775640,nssv1775591,nssv1775562,nssv1775606,nssv1775569,nssv1775618,nssv1775573,nssv1775610,nssv1775586,nssv1775613,nssv1775642,nssv1775614,nssv1775574,nssv1775589,nssv1775567,nssv1775627,nssv1775575,nssv1775649,nssv1775563,nssv1775633,nssv1775561,nssv1775612,nssv1775635,nssv1775607,nssv1775641,nssv1775605,nssv1775559,nssv1775580,nssv1775564,nssv1775601,nssv1775637,nssv1775630,nssv1775558,nssv1775625,nssv1775576,nssv1775584,nssv1775577,nssv1775596,nssv1775571,nssv1775595,nssv1775585,nssv1775624,nssv1775636,nssv1775592,nssv1775647,nssv1775594,nssv1775653,nssv1775608,nssv1775617,nssv1775651,nssv1775646,nssv1775587,nssv1775631,nssv1775623,nssv1775600,nssv1775602,nssv1775652,nssv1775582,nssv1775650,nssv1775648,nssv1775629,nssv1775620,nssv1775599,nssv1775557,nssv1775590,nssv1775621,nssv1775622,nssv1775644,nssv1775615 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946048 1 87740572 87746464 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775674,nssv1774673,nssv1775670,nssv1774644,nssv1775683,nssv1774658,nssv1775664,nssv1775680,nssv1775676,nssv1774663,nssv1775685,nssv1774656,nssv1775655,nssv1774649,nssv1775678,nssv1774651,nssv1774686,nssv1774642,nssv1775667,nssv1774665,nssv1775665,nssv1774643,nssv1775662,nssv1774648,nssv1775659,nssv1775654,nssv1775663,nssv1774652,nssv1774689,nssv1774672,nssv1775657,nssv1774654,nssv1775682,nssv1774671,nssv1775675,nssv1774666,nssv1775671,nssv1774667,nssv1774684,nssv1774679,nssv1775672,nssv1774646,nssv1774687,nssv1774662,nssv1775658,nssv1774677,nssv1775660,nssv1774650,nssv1775669,nssv1775677,nssv1775666,nssv1774675,nssv1774683,nssv1774647,nssv1774685,nssv1774670,nssv1775661,nssv1774676,nssv1774680,nssv1774659,nssv1774682,nssv1774674,nssv1774681,nssv1774645,nssv1775673,nssv1775681,nssv1774688,nssv1775684,nssv1775656,nssv1774655,nssv1775668,nssv1774668,nssv1774657,nssv1774664,nssv1774661,nssv1774678,nssv1775679,nssv1774669,nssv1774653,nssv1774660 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508382 1 87750533 87812254 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618979 M 4 0 1 "" NA10860 esv2112199 1 87819531 87820008 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4596049 M 1 0 1 "" NA18507 nsv1810 1 87828384 87873173 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7341 M 9 0 1 "" NA12156 nsv159009 1 87847397 87854193 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177587 M 24 "" nsv517179 1 88055598 88075192 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv653937,nssv661396 M 2026 0 2 "" esv1002740 1 88058428 88058583 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571534 M 3 0 1 "" HuRef nsv159923 1 88058429 88058582 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178501 M 24 "" nsv437893 1 88089816 88098295 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv471623 M 269 0 1 "" NA10839 nsv470725 1 88225891 88817926 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547751 M 443 0 1 "" HGDP00647 nsv522244 1 88256151 88276958 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695024 M 2026 0 1 "" nsv462417 1 88256151 88817926 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538586 M 1557 0 1 "" HGDP00647 nsv546772 1 88256151 88817926 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173049 M 17421 0 1 "" HGDP00647 nsv475695 1 88312004 88312004 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016113 M 9 1 0 "" NA12878 nsv830492 1 88383970 88542802 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1447673,nssv1447684 M 95 1 1 "" nsv830503 1 88471795 88649330 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447695 M 95 1 0 "" nsv546773 1 88558639 88934720 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718755 M 17421 0 1 PKN2 esv3335351 1 88586203 88586222 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595412 M 185 1 0 "" NA12814 esv990593 1 88633305 88633305 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581161 M 3 1 0 "" HuRef esv1034966 1 88633306 88633306 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3948410 M 2 1 0 "" HuRef esv27318 1 88652065 88679387 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16524 M 40 1 0 "" NA11995 esv2594219 1 88695503 88696560 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5171155 M 1 1 0 "" NA18507 esv1373305 1 88695515 88695950 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3885687 M 2 0 1 "" HuRef nsv1821 1 88720408 88755739 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3002,nssv4384,nssv5710 M 9 3 0 "" NA12878,NA18555,NA19129 nsv1002331 1 88732114 88822482 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481352 M 29084 0 1 "" esv988026 1 88743407 88745186 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563749 M 3 1 0 "" HuRef esv1673526 1 88745413 88745413 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4117122 M 2 1 0 "" HuRef nsv946052 1 88813206 88832643 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775828,nssv1775892,nssv1775880,nssv1775874,nssv1775810,nssv1775842,nssv1775879,nssv1775888,nssv1775801,nssv1775845,nssv1775812,nssv1775868,nssv1775821,nssv1775871,nssv1775823,nssv1775844,nssv1775819,nssv1775826,nssv1775830,nssv1775894,nssv1775882,nssv1775861,nssv1775881,nssv1775853,nssv1775804,nssv1775863,nssv1775809,nssv1775889,nssv1775800,nssv1775824,nssv1775815,nssv1775832,nssv1775816,nssv1775860,nssv1775802,nssv1775890,nssv1775817,nssv1775849,nssv1775876,nssv1775886,nssv1775811,nssv1775870,nssv1775820,nssv1775891,nssv1775803,nssv1775866,nssv1775883,nssv1775893,nssv1775813,nssv1775856,nssv1775805,nssv1775887,nssv1775808,nssv1775838,nssv1775806,nssv1775843,nssv1775807,nssv1775836,nssv1775884,nssv1775862,nssv1775885,nssv1775837,nssv1775818,nssv1775873,nssv1775827,nssv1775846,nssv1775877,nssv1775875,nssv1775814,nssv1775831,nssv1775878,nssv1775848,nssv1775867,nssv1775822,nssv1775850,nssv1775857,nssv1775825,nssv1775799,nssv1775865,nssv1775852,nssv1775835,nssv1775864,nssv1775840,nssv1775859,nssv1775869,nssv1775841,nssv1775872,nssv1775895,nssv1775847,nssv1775858,nssv1775855,nssv1775854,nssv1775839,nssv1775834,nssv1775851,nssv1775829,nssv1775833 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546774 1 88866831 88867782 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718757,nssv718756,nssv718763,nssv718762,nssv718761,nssv718758,nssv718760,nssv718759,nssv718764 M 17421 0 9 "" nsv823476 1 88867042 88867919 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430351,nssv1435661 M 31 0 2 "" AK16,NA18566 esv23437 1 88867104 88867896 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10970 M 40 0 5 "" NA06985,NA12239,NA18502,NA18523,NA19190 nsv546775 1 88867128 88867782 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718822,nssv718804,nssv718830,nssv718835,nssv718820,nssv718836,nssv718834,nssv718825,nssv718821,nssv718824,nssv718833,nssv718832,nssv718818,nssv718817,nssv718831,nssv718811,nssv718823,nssv718771,nssv718829,nssv718770,nssv718816,nssv718769,nssv718765,nssv718766,nssv718768,nssv718767,nssv718826,nssv718815,nssv718828,nssv718773,nssv718774,nssv718772,nssv718819,nssv718776,nssv718812,nssv718775,nssv718783,nssv718778,nssv718781,nssv718810,nssv718777,nssv718782,nssv718779,nssv718780,nssv718794,nssv718814,nssv718787,nssv718800,nssv718793,nssv718784,nssv718795,nssv718799,nssv718785,nssv718798,nssv718827,nssv718813,nssv718797,nssv718786,nssv718796,nssv718806,nssv718801,nssv718788,nssv718807,nssv718792,nssv718809,nssv718789,nssv718803,nssv718791,nssv718808,nssv718802,nssv718805,nssv718790 M 17421 0 72 "" nsv546776 1 88867128 88870440 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718837 M 17421 0 1 "" esv3305563 1 88888305 88888306 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7762594,essv7755925,essv7755259,essv7744710,essv7741635,essv7745426,essv7744122,essv7755028,essv7750971,essv7742517 M 185 10 0 "" NA12750,NA18502,NA18510,NA18520,NA18523,NA18566,NA18609,NA19102,NA19147,NA19190 esv3424864 1 88888305 88888315 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900002,essv8900000,essv8899998,essv8900006,essv8900005,essv8900007,essv8899997,essv8900001,essv8900008,essv8899999 M 185 10 0 "" NA12750,NA18502,NA18510,NA18520,NA18523,NA18566,NA18609,NA19102,NA19147,NA19190 nsv508021 1 88895508 88901508 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622293,nssv624215,nssv618497 M 4 0 0 "" CHM,NA10860,NA18994 esv2763579 1 88905070 88921381 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032379 M 1109 0 1 "" SW_0008 nsv830514 1 88953414 89115101 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447706 M 95 0 1 GTF2B,PKN2 esv3403767 1 88991967 88991986 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678437,essv8678438 M 185 2 0 PKN2 NA12878,NA19240 esv3428030 1 88991969 88991978 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674147,essv8674144,essv8674146,essv8674148,essv8674145 M 185 5 0 PKN2 NA12878,NA12892,NA19238,NA19239,NA19240 esv3308381 1 88991974 88991975 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841528,essv7842367,essv7840031,essv7843112,essv7842114 M 185 5 0 PKN2 NA12878,NA12892,NA19238,NA19239,NA19240 dgv359n54 1 88993060 89068081 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546778,nsv546777 M 17421 2 0 PKN2 HGDP01049 nsv830525 1 89015134 89213918 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447728,nssv1447717 M 95 0 2 CCBL2,GTF2B,PKN2 esv3307993 1 89019605 89019606 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836807,essv7838845,essv7837600 M 185 3 0 PKN2 NA19238,NA19239,NA19240 esv3450284 1 89019677 89019748 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674149,essv8674150 M 185 2 0 PKN2 NA19238,NA19239 esv3340558 1 89019678 89019697 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900012,essv8900010,essv8900018,essv8900013,essv8900009,essv8900011,essv8900014,essv8900016,essv8900017 M 185 9 0 PKN2 NA18499,NA18511,NA18517,NA18907,NA18916,NA19093,NA19102,NA19108,NA19138 esv3306396 1 89019685 89019686 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7761470,essv7755866,essv7740963,essv7749699,essv7743889,essv7743313,essv7761577,essv7750321,essv7746937,essv7763053,essv7755520 M 185 11 0 PKN2 NA18499,NA18511,NA18517,NA18907,NA18916,NA19093,NA19102,NA19108,NA19138,NA19238,NA19239 nsv830537 1 89028655 89178666 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447740 M 95 1 0 CCBL2,GTF2B,PKN2 dgv22n27 1 89029966 89133108 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv462428,nsv462461,nsv462439 M 1557 3 0 GTF2B,PKN2 HGDP00995,HGDP01003,HGDP01010 dgv360n54 1 89029966 89133108 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546779,nsv546782,nsv546780,nsv546783 M 17421 6 0 GTF2B,PKN2 HGDP00995,HGDP00996,HGDP01003,HGDP01005,HGDP01008,HGDP01010 nsv462450 1 89037836 89079405 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538610 M 1557 1 0 PKN2 HGDP01047 nsv546781 1 89037836 89079405 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173055 M 17421 1 0 PKN2 HGDP01047 nsv946053 1 89067075 89067575 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775905,nssv1775943,nssv1775977,nssv1775962,nssv1775981,nssv1775992,nssv1775904,nssv1775968,nssv1775910,nssv1775986,nssv1775920,nssv1775930,nssv1775918,nssv1775987,nssv1775976,nssv1775958,nssv1775973,nssv1775965,nssv1775898,nssv1775984,nssv1775978,nssv1775936,nssv1775980,nssv1775988,nssv1775906,nssv1775945,nssv1775909,nssv1775934,nssv1775901,nssv1775932,nssv1775982,nssv1775952,nssv1775924,nssv1775967,nssv1775913,nssv1775961,nssv1775912,nssv1775991,nssv1775975,nssv1775935,nssv1775979,nssv1775931,nssv1775914,nssv1775923,nssv1775899,nssv1775955,nssv1775916,nssv1775953,nssv1775900,nssv1775921,nssv1775927,nssv1775966,nssv1775925,nssv1775939,nssv1775903,nssv1775970,nssv1775911,nssv1775933,nssv1775915,nssv1775938,nssv1775902,nssv1775941,nssv1775917,nssv1775969,nssv1775908,nssv1775951,nssv1775897,nssv1775960,nssv1775907,nssv1775971,nssv1775974,nssv1775972,nssv1775929,nssv1775948,nssv1775896,nssv1775990,nssv1775937,nssv1775949,nssv1775947,nssv1775964,nssv1775926,nssv1775954,nssv1775985,nssv1775989,nssv1775963,nssv1775944,nssv1775946,nssv1775928,nssv1775940,nssv1775983,nssv1775956,nssv1775950,nssv1775959,nssv1775957,nssv1775942,nssv1775919,nssv1775922 M 97 10 0 PKN2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv462472 1 89123329 89209701 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538627 M 1557 0 1 CCBL2,GTF2B 1780862212_A nsv546784 1 89123329 89209701 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173058 M 17421 0 1 CCBL2,GTF2B 1780862212_A dgv207n100 1 89170436 89234242 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006272,nsv1007584 M 29084 0 2 CCBL2,RBMXL1 esv2758948 1 89184656 89333311 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757739 M 270 27 0 CCBL2,GBP1,GBP3,RBMXL1 NA07048,NA10831,NA11829,NA11840,NA12005,NA12874,NA18529,NA18532,NA18632,NA18854,NA18981,NA18987,NA19000,NA19094,NA19099,NA19101,NA19129,NA19132,NA19144,NA19154,NA19159,NA19161,NA19171,NA19194,NA19206,NA19210,NA19223 nsv1002798 1 89192649 89227177 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699599 M 29084 1 0 CCBL2,RBMXL1 nsv946054 1 89219549 89222010 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776073,nssv1776032,nssv1776003,nssv1776030,nssv1776074,nssv1776023,nssv1776072,nssv1776029,nssv1776077,nssv1776041,nssv1776014,nssv1776465,nssv1776022,nssv1776460,nssv1775995,nssv1776044,nssv1776017,nssv1776461,nssv1776024,nssv1776036,nssv1775998,nssv1776063,nssv1776078,nssv1776058,nssv1776076,nssv1776037,nssv1776002,nssv1776053,nssv1776008,nssv1776069,nssv1776007,nssv1776019,nssv1776015,nssv1776080,nssv1776001,nssv1776039,nssv1775994,nssv1776054,nssv1776071,nssv1776038,nssv1776010,nssv1776464,nssv1776006,nssv1776056,nssv1776009,nssv1776016,nssv1776079,nssv1776055,nssv1776070,nssv1776466,nssv1776011,nssv1776047,nssv1776075,nssv1776043,nssv1776004,nssv1776034,nssv1775997,nssv1776042,nssv1776000,nssv1776067,nssv1775996,nssv1776066,nssv1776021,nssv1776463,nssv1776005,nssv1776018,nssv1776012,nssv1776048,nssv1775999,nssv1776026,nssv1776013,nssv1776458,nssv1775993,nssv1776046,nssv1776051,nssv1776045,nssv1776052,nssv1776050,nssv1776462,nssv1776061,nssv1776035,nssv1776033,nssv1776020,nssv1776027,nssv1776040,nssv1776049,nssv1776065,nssv1776057,nssv1776064,nssv1776059,nssv1776068,nssv1776025,nssv1776062,nssv1776459,nssv1776031,nssv1776060,nssv1776028 M 97 10 0 CCBL2,RBMXL1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv7403 1 89227131 89227324 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29844 M 1 0 0 CCBL2,RBMXL1 esv1998863 1 89232018 89232445 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4984472 M 1 0 1 "" NA18507 nsv546785 1 89232516 89249015 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718839 M 17421 0 1 GBP3 nsv10361 1 89248331 89251634 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv14761,nssv14426,nssv17760,nssv12425,nssv17748,nssv20423,nssv14424,nssv16753,nssv15093,nssv15767,nssv14402,nssv17429,nssv19084,nssv14750,nssv16101,nssv14758,nssv13421,nssv13437,nssv17744,nssv15106,nssv14408,nssv14736,nssv13432,nssv13087,nssv12775,nssv16092 M 31 26 0 GBP3 NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12872,NA18502,NA18504,NA18517,NA18552,NA18563,NA18564,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv819062 1 89248672 89251662 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419497 M 2 1 0 GBP3 AK1 dgv55n67 1 89248781 89251213 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823509,nsv823498,nsv823487 M 31 0 11 GBP3 AK16,AK2,AK20,AK4,NA18526,NA18537,NA18564,NA18566,NA18947,NA18949,NA18951 nsv820541 1 89248781 89251213 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420425 M 1 0 1 GBP3 NA10851 esv22437 1 89249007 89251114 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15180 M 40 37 0 GBP3 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv546786 1 89249015 89251020 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv718842,nssv718841,nssv718840,nssv718849,nssv718843,nssv718846,nssv718845,nssv718844,nssv718848,nssv718847,nssv718850,nssv718851,nssv718858,nssv718852,nssv718853,nssv718854,nssv718855,nssv718857,nssv718856 M 17421 0 19 GBP3 nsv946055 1 89249083 89252680 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776495,nssv1776562,nssv1776480,nssv1776537,nssv1776469,nssv1776511,nssv1776545,nssv1776509,nssv1776544,nssv1776540,nssv1776477,nssv1776536,nssv1776481,nssv1776513,nssv1776486,nssv1776497,nssv1776487,nssv1776507,nssv1776549,nssv1776516,nssv1776491,nssv1776492,nssv1776551,nssv1776558,nssv1776488,nssv1776514,nssv1776552,nssv1776521,nssv1776476,nssv1776502,nssv1776548,nssv1776519,nssv1776550,nssv1776499,nssv1776478,nssv1776534,nssv1776473,nssv1776467,nssv1776479,nssv1776525,nssv1776496,nssv1776500,nssv1776472,nssv1776528,nssv1776489,nssv1776522,nssv1776546,nssv1776533,nssv1776484,nssv1776554,nssv1776553,nssv1776508,nssv1776547,nssv1776490,nssv1776470,nssv1776524,nssv1776485,nssv1776563,nssv1776483,nssv1776510,nssv1776471,nssv1776504,nssv1776468,nssv1776559,nssv1776475,nssv1776506,nssv1776474,nssv1776556,nssv1776498,nssv1776501,nssv1776482,nssv1776515,nssv1776539,nssv1776560,nssv1776541,nssv1776531,nssv1776529,nssv1776538,nssv1776532,nssv1776561,nssv1776526,nssv1776523,nssv1776555,nssv1776527,nssv1776542,nssv1776535,nssv1776543,nssv1776518,nssv1776530,nssv1776512,nssv1776493,nssv1776557,nssv1776520,nssv1776503,nssv1776505,nssv1776494,nssv1776517 M 97 10 0 GBP3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv361n54 1 89249500 89250926 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546787,nsv546789 M 17421 2 0 GBP3 dgv362n54 1 89249500 89251020 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546790,nsv546791,nsv546788 M 17421 0 137 GBP3 dgv363n54 1 89250052 89251020 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546795,nsv546792 M 17421 0 78 GBP3 nsv546793 1 89250052 89251561 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719025 M 17421 0 1 GBP3 nsv546794 1 89250052 89252346 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719026 M 17421 0 1 GBP3 esv33356 1 89285439 89292763 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98676 M 51 0 1 GBP1 21606 nsv546796 1 89290708 89494450 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719078 M 17421 0 1 GBP1,GBP2,GBP4,GBP7 nsv946056 1 89294048 89295452 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776570,nssv1774348,nssv1774397,nssv1774360,nssv1774341,nssv1774385,nssv1774334,nssv1774404,nssv1776573,nssv1774406,nssv1774337,nssv1774356,nssv1774390,nssv1774365,nssv1774396,nssv1774380,nssv1776565,nssv1774401,nssv1776566,nssv1774358,nssv1776574,nssv1774387,nssv1776577,nssv1774350,nssv1776575,nssv1774389,nssv1774394,nssv1774407,nssv1774344,nssv1774388,nssv1776584,nssv1774381,nssv1776581,nssv1774349,nssv1776569,nssv1774370,nssv1774335,nssv1774376,nssv1776576,nssv1774363,nssv1776582,nssv1774379,nssv1776578,nssv1774357,nssv1776567,nssv1774364,nssv1776580,nssv1774366,nssv1774393,nssv1774371,nssv1774398,nssv1774340,nssv1776568,nssv1774361,nssv1774392,nssv1774352,nssv1774391,nssv1774408,nssv1774395,nssv1774369,nssv1776571,nssv1774336,nssv1774399,nssv1774374,nssv1776572,nssv1774386,nssv1774342,nssv1776564,nssv1776583,nssv1774343,nssv1776579,nssv1774373,nssv1774345,nssv1774338,nssv1774372,nssv1774351,nssv1774375,nssv1774354,nssv1774400,nssv1774347,nssv1774368,nssv1774346,nssv1774362,nssv1774377,nssv1774339,nssv1774353,nssv1774382,nssv1774403,nssv1774405,nssv1774355,nssv1774383,nssv1774384,nssv1774359,nssv1774378,nssv1774409,nssv1774367,nssv1774402 M 97 10 0 GBP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946057 1 89297751 89301173 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774411,nssv1775087,nssv1775034,nssv1775079,nssv1775055,nssv1775076,nssv1774414,nssv1775069,nssv1775050,nssv1775058,nssv1775038,nssv1775074,nssv1775100,nssv1775066,nssv1775104,nssv1775073,nssv1775105,nssv1775061,nssv1775099,nssv1775091,nssv1775098,nssv1775051,nssv1775102,nssv1775085,nssv1775041,nssv1775070,nssv1775043,nssv1775095,nssv1775037,nssv1775081,nssv1775036,nssv1775060,nssv1774413,nssv1775080,nssv1775042,nssv1775093,nssv1775048,nssv1775062,nssv1775039,nssv1775067,nssv1775046,nssv1775078,nssv1775047,nssv1775088,nssv1775035,nssv1775065,nssv1775103,nssv1775052,nssv1775044,nssv1775075,nssv1775054,nssv1775053,nssv1775057,nssv1775063,nssv1775032,nssv1775071,nssv1775096,nssv1775086,nssv1775040,nssv1775094,nssv1775033,nssv1775084,nssv1774412,nssv1775077,nssv1775045,nssv1775064,nssv1774415,nssv1775059,nssv1775101,nssv1774410,nssv1775097,nssv1775092,nssv1775083,nssv1775072,nssv1775049,nssv1775089,nssv1775082,nssv1775056,nssv1775090,nssv1775068 M 97 10 0 GBP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946059 1 89301173 89301673 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775120,nssv1775174,nssv1775183,nssv1775173,nssv1775134,nssv1775149,nssv1775116,nssv1775172,nssv1775187,nssv1775138,nssv1775190,nssv1775167,nssv1775118,nssv1775150,nssv1775130,nssv1775195,nssv1775188,nssv1775168,nssv1775189,nssv1775106,nssv1775125,nssv1775136,nssv1775191,nssv1775180,nssv1775192,nssv1775147,nssv1775135,nssv1775200,nssv1775111,nssv1775129,nssv1775119,nssv1775143,nssv1775123,nssv1775132,nssv1775121,nssv1775162,nssv1775122,nssv1775148,nssv1775126,nssv1775159,nssv1775124,nssv1775169,nssv1775114,nssv1775131,nssv1775107,nssv1775166,nssv1775117,nssv1775164,nssv1775137,nssv1775198,nssv1775110,nssv1775140,nssv1775112,nssv1775178,nssv1775113,nssv1775177,nssv1775127,nssv1775154,nssv1775185,nssv1775151,nssv1775186,nssv1775179,nssv1775128,nssv1775199,nssv1775109,nssv1775165,nssv1775184,nssv1775157,nssv1775115,nssv1775141,nssv1775108,nssv1775170,nssv1775201,nssv1775146,nssv1775176,nssv1775144,nssv1775152,nssv1775145,nssv1775142,nssv1775202,nssv1775182,nssv1775193,nssv1775196,nssv1775194,nssv1775197,nssv1775155,nssv1775171,nssv1775133,nssv1775160,nssv1775161,nssv1775181,nssv1775158,nssv1775163,nssv1775153,nssv1775175,nssv1775139,nssv1775156 M 97 10 0 GBP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946060 1 89302835 89303547 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775212,nssv1775238,nssv1775232,nssv1775267,nssv1775213,nssv1775272,nssv1775215,nssv1775235,nssv1775227,nssv1775251,nssv1775211,nssv1775255,nssv1775273,nssv1775256,nssv1775223,nssv1775259,nssv1775276,nssv1775252,nssv1775214,nssv1775233,nssv1775209,nssv1775257,nssv1775279,nssv1775268,nssv1775234,nssv1775253,nssv1775224,nssv1775269,nssv1775274,nssv1775249,nssv1775218,nssv1775270,nssv1775277,nssv1775260,nssv1775217,nssv1775264,nssv1775222,nssv1775239,nssv1775220,nssv1775226,nssv1775278,nssv1775246,nssv1775221,nssv1775261,nssv1775208,nssv1775247,nssv1775206,nssv1775271,nssv1775231,nssv1775240,nssv1775216,nssv1775236,nssv1775207,nssv1775241,nssv1775204,nssv1775237,nssv1775281,nssv1775250,nssv1775210,nssv1775265,nssv1775219,nssv1775229,nssv1775280,nssv1775263,nssv1775282,nssv1775230,nssv1775205,nssv1775262,nssv1775275,nssv1775228,nssv1775225,nssv1775254,nssv1775244,nssv1775245,nssv1775242,nssv1775266,nssv1775203,nssv1775258,nssv1775248,nssv1775243 M 97 10 0 GBP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv526528 1 89319727 89326189 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702841 M 2026 1 0 "" nsv462494 1 89319727 89362144 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538647 M 1557 0 1 GBP2 NINDS_145 nsv546797 1 89319727 89362144 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173059 M 17421 0 1 GBP2 NINDS_145 nsv523587 1 89323592 89327058 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699377 M 2026 0 1 "" nsv946061 1 89340732 89343229 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775360,nssv1775346,nssv1775293,nssv1775327,nssv1775307,nssv1775370,nssv1775366,nssv1775359,nssv1775288,nssv1775324,nssv1775286,nssv1775344,nssv1775299,nssv1775330,nssv1775291,nssv1775323,nssv1775292,nssv1775338,nssv1775300,nssv1775358,nssv1775369,nssv1775328,nssv1775301,nssv1775357,nssv1775294,nssv1775349,nssv1775303,nssv1775329,nssv1775298,nssv1775355,nssv1775287,nssv1775374,nssv1775295,nssv1775283,nssv1775363,nssv1775335,nssv1775364,nssv1775350,nssv1775297,nssv1775377,nssv1775365,nssv1775332,nssv1775284,nssv1775339,nssv1775296,nssv1775372,nssv1775290,nssv1775336,nssv1775368,nssv1775371,nssv1775367,nssv1775316,nssv1775311,nssv1775376,nssv1775302,nssv1775331,nssv1775312,nssv1775356,nssv1775304,nssv1775309,nssv1775314,nssv1775348,nssv1775361,nssv1775337,nssv1775289,nssv1775351,nssv1775362,nssv1775353,nssv1775285,nssv1775315,nssv1775305,nssv1775341,nssv1775340,nssv1775333,nssv1775325,nssv1775320,nssv1775354,nssv1775318,nssv1775317,nssv1775313,nssv1775306,nssv1775326,nssv1775352,nssv1775375,nssv1775319,nssv1775345,nssv1775342,nssv1775308,nssv1775378,nssv1775343,nssv1775373,nssv1775334,nssv1775322,nssv1775310,nssv1775321,nssv1775347,nssv1775379 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv830548 1 89380337 89536868 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447751 M 95 1 0 GBP4,GBP5,GBP7,LOC729930 nsv546798 1 89445210 89499180 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719079 M 17421 0 1 GBP5 nsv508022 1 89448208 89454208 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621472,nssv622294,nssv624216,nssv618498 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 nsv525030 1 89494450 89499180 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701071 M 2026 0 1 GBP5 nsv475102 1 89527360 89527360 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014728 M 9 1 0 "" NA19240 nsv159897 1 89533878 89533937 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178475 M 24 "" nsv525147 1 89548821 89551639 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701217 M 2026 0 1 "" nsv474893 1 89551666 89551666 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013794 M 9 1 0 "" NA18956 esv29339 1 89571557 89584796 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19397,esv14343 M 40 30 0 "" NA06985,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18511,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19108,NA19114,NA19147,NA19190,NA19240 nsv546799 1 89580975 89584681 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719080 M 17421 0 1 "" nsv546800 1 89584175 89584733 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719081,nssv719083,nssv719082 M 17421 0 3 "" nsv546801 1 89584329 89584432 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719084 M 17421 0 1 "" nsv946062 1 89633252 89659554 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775454,nssv1775414,nssv1775457,nssv1775422,nssv1775409,nssv1775419,nssv1775395,nssv1775405,nssv1775384,nssv1775407,nssv1775404,nssv1775449,nssv1775385,nssv1775444,nssv1775400,nssv1775413,nssv1775408,nssv1775447,nssv1775396,nssv1775418,nssv1775401,nssv1775446,nssv1775392,nssv1775427,nssv1775397,nssv1775442,nssv1775459,nssv1775443,nssv1775450,nssv1775421,nssv1775456,nssv1775416,nssv1775383,nssv1775440,nssv1775398,nssv1775441,nssv1775388,nssv1775426,nssv1775386,nssv1775435,nssv1775391,nssv1775445,nssv1775394,nssv1775436,nssv1775453,nssv1775406,nssv1775387,nssv1775429,nssv1775389,nssv1775432,nssv1775382,nssv1775428,nssv1775411,nssv1775434,nssv1775381,nssv1775438,nssv1775455,nssv1775380,nssv1775393,nssv1775425,nssv1775399,nssv1775420,nssv1775458,nssv1775433,nssv1775451,nssv1775431,nssv1775452,nssv1775415,nssv1775390,nssv1775448,nssv1775402,nssv1775417,nssv1775439,nssv1775430,nssv1775410,nssv1775424,nssv1775412,nssv1775437,nssv1775423,nssv1775403 M 97 10 0 GBP1P1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1013863 1 89689119 89716926 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477077 M 29084 1 0 "" esv3893801 1 89740388 89755307 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797741,essv25796910 M 3017 0 2 "" nsv477335 1 89748042 89748042 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012160 M 9 1 0 "" NA18517 nsv830559 1 89773994 89950109 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447762 M 95 1 0 FLJ27354,LRRC8B,LRRC8C esv26614 1 89794669 89795405 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13539 M 40 0 1 LRRC8B NA19099 nsv508023 1 89861162 89867162 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624217 M 4 0 0 FLJ27354 NA18994 esv25406 1 89874796 89875496 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11665 M 40 0 1 LRRC8C NA19129 nsv946063 1 89899132 89900862 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1774962,nssv1775011,nssv1776150,nssv1774993,nssv1774972,nssv1774974,nssv1774957,nssv1774982,nssv1775463,nssv1774978,nssv1774964,nssv1774989,nssv1775462,nssv1775019,nssv1775029,nssv1776155,nssv1775031,nssv1774975,nssv1774965,nssv1775017,nssv1774961,nssv1775012,nssv1774959,nssv1774981,nssv1774966,nssv1774986,nssv1774969,nssv1774999,nssv1774976,nssv1774992,nssv1774968,nssv1774973,nssv1775464,nssv1776153,nssv1774954,nssv1774997,nssv1775025,nssv1776156,nssv1775030,nssv1775024,nssv1774979,nssv1776160,nssv1776152,nssv1774994,nssv1774955,nssv1774988,nssv1774953,nssv1776161,nssv1774977,nssv1776157,nssv1774967,nssv1775018,nssv1774960,nssv1775022,nssv1774958,nssv1775005,nssv1774970,nssv1774998,nssv1775028,nssv1776159,nssv1775027,nssv1775023,nssv1776151,nssv1774984,nssv1774963,nssv1774987,nssv1775461,nssv1776158,nssv1774956,nssv1774980,nssv1775026,nssv1775000,nssv1775010,nssv1775003,nssv1774990,nssv1775013,nssv1775002,nssv1774983,nssv1775016,nssv1774971,nssv1774995,nssv1775014,nssv1775008,nssv1774991,nssv1774985,nssv1775015,nssv1775009,nssv1775001,nssv1775021,nssv1775460,nssv1775004,nssv1776154,nssv1775006,nssv1774996,nssv1775020,nssv1776162,nssv1775007 M 97 10 0 LRRC8C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv521773 1 89905170 89915816 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694540 M 2026 0 1 LRRC8C esv2430347 1 89932682 89934169 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5366948 M 1 0 1 LRRC8C NA18507 esv21711 1 89941625 89946753 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20234 M 40 0 1 LRRC8C NA18909 nsv476991 1 89982755 89982755 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018308 M 9 1 0 "" NA12878 nsv1832 1 90127577 90172729 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7352,nssv5725 M 9 0 2 LRRC8D NA12156,NA19129 esv3331862 1 90143117 90143166 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674151 M 185 1 0 LRRC8D NA19238 esv3303537 1 90143139 90143140 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7756826,essv7761728,essv7748212,essv7761094,essv7752387,essv7752238,essv7742983,essv7749124,essv7750729 M 185 9 0 LRRC8D NA06986,NA07346,NA11830,NA11919,NA12004,NA12751,NA12761,NA18573,NA19238 esv3388679 1 90143145 90143168 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900022,essv8900023,essv8900027,essv8900021,essv8900024,essv8900020,essv8900019,essv8900025 M 185 8 0 LRRC8D NA06986,NA07346,NA11830,NA11919,NA12004,NA12751,NA12761,NA18573 nsv1000666 1 90156689 90215806 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699600 M 29084 1 0 LRRC8D nsv1843 1 90218710 90263602 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7358 M 9 0 1 GEMIN8P4,ZNF326 NA12156 nsv478568 1 90239127 90239127 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020310 M 9 1 0 ZNF326 NA18507 nsv528471 1 90246439 90304844 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705074 M 2026 0 1 ZNF326 nsv473215 1 90269253 90269253 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015078 M 9 1 0 "" NA19129 nsv830570 1 90297803 90458114 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447773,nssv1447784 M 95 2 0 "" nsv462506 1 90306636 90328738 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538654 M 1557 0 1 "" HGDP00984 nsv546802 1 90306636 90328738 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173060 M 17421 0 1 "" HGDP00984 esv1347608 1 90314072 90314072 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3635618 M 2 1 0 "" HuRef esv3893812 1 90339267 90648476 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789797,essv25789826 M 3017 2 0 "" esv1590548 1 90422013 90422013 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4211785 M 2 1 0 "" HuRef esv1416558 1 90432907 90432907 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3962338 M 2 1 0 "" HuRef esv3384334 1 90450875 90450902 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863726 M 185 1 0 "" NA12005 nsv546803 1 90452322 90550305 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719085 M 17421 0 1 "" nsv524317 1 90502332 90609327 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700219 M 2026 1 0 "" nsv946064 1 90519182 90522380 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776174,nssv1776193,nssv1776177,nssv1776207,nssv1776183,nssv1776253,nssv1776164,nssv1776256,nssv1776184,nssv1776252,nssv1776245,nssv1776204,nssv1776187,nssv1776189,nssv1776182,nssv1776215,nssv1776168,nssv1776196,nssv1776165,nssv1776232,nssv1776248,nssv1776222,nssv1776194,nssv1776203,nssv1776173,nssv1776221,nssv1776185,nssv1776239,nssv1776241,nssv1776209,nssv1776244,nssv1776236,nssv1776169,nssv1776211,nssv1776240,nssv1776251,nssv1776167,nssv1776206,nssv1776181,nssv1776216,nssv1776172,nssv1776250,nssv1776246,nssv1776228,nssv1776175,nssv1776201,nssv1776179,nssv1776188,nssv1776170,nssv1776202,nssv1776192,nssv1776197,nssv1776243,nssv1776190,nssv1776249,nssv1776258,nssv1776176,nssv1776234,nssv1776171,nssv1776208,nssv1776178,nssv1776218,nssv1776247,nssv1776198,nssv1776166,nssv1776219,nssv1776242,nssv1776223,nssv1776191,nssv1776238,nssv1776180,nssv1776233,nssv1776231,nssv1776205,nssv1776257,nssv1776255,nssv1776227,nssv1776226,nssv1776195,nssv1776213,nssv1776210,nssv1776235,nssv1776220,nssv1776186,nssv1776212,nssv1776237,nssv1776214,nssv1776254,nssv1776225,nssv1776217,nssv1776229,nssv1776259,nssv1776230,nssv1776200,nssv1776199,nssv1776224,nssv1776163 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946065 1 90524787 90536375 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776281,nssv1776325,nssv1776274,nssv1776355,nssv1776271,nssv1776321,nssv1776340,nssv1776324,nssv1776344,nssv1776315,nssv1776291,nssv1776331,nssv1776263,nssv1776301,nssv1776262,nssv1776318,nssv1776272,nssv1776353,nssv1776337,nssv1776322,nssv1776341,nssv1776290,nssv1776261,nssv1776303,nssv1776343,nssv1776313,nssv1776268,nssv1776305,nssv1776342,nssv1776298,nssv1776270,nssv1776352,nssv1776266,nssv1776307,nssv1776265,nssv1776285,nssv1776277,nssv1776323,nssv1776345,nssv1776347,nssv1776284,nssv1776320,nssv1776269,nssv1776354,nssv1776282,nssv1776293,nssv1776278,nssv1776356,nssv1776346,nssv1776297,nssv1776276,nssv1776333,nssv1776280,nssv1776306,nssv1776339,nssv1776326,nssv1776264,nssv1776311,nssv1776273,nssv1776299,nssv1776338,nssv1776328,nssv1776275,nssv1776350,nssv1776267,nssv1776300,nssv1776279,nssv1776294,nssv1776288,nssv1776349,nssv1776289,nssv1776316,nssv1776312,nssv1776314,nssv1776308,nssv1776287,nssv1776335,nssv1776317,nssv1776330,nssv1776336,nssv1776310,nssv1776348,nssv1776334,nssv1776309,nssv1776329,nssv1776319,nssv1776332,nssv1776283,nssv1776296,nssv1776292,nssv1776286,nssv1776327,nssv1776295,nssv1776304,nssv1776351,nssv1776302,nssv1776260 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv521123 1 90543154 90609327 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697801 M 2026 1 0 "" nsv1000787 1 90582064 90647069 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464741 M 29084 0 1 "" esv2758949 1 90592580 90755887 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757740 M 270 93 5 "" NA06991,NA06993,NA06994,NA07000,NA07029,NA07034,NA07048,NA07056,NA07357,NA10835,NA10838,NA10839,NA10856,NA10859,NA11829,NA11831,NA12005,NA12144,NA12236,NA12248,NA12249,NA12762,NA12814,NA12873,NA12878,NA12891,NA18501,NA18502,NA18506,NA18508,NA18515,NA18516,NA18517,NA18522,NA18524,NA18526,NA18529,NA18545,NA18547,NA18550,NA18558,NA18561,NA18570,NA18576,NA18582,NA18612,NA18620,NA18621,NA18622,NA18623,NA18636,NA18856,NA18859,NA18912,NA18913,NA18942,NA18949,NA18956,NA18959,NA18960,NA18964,NA18969,NA18971,NA18974,NA18975,NA18980,NA18981,NA18991,NA18998,NA19007,NA19092,NA19093,NA19094,NA19100,NA19101,NA19129,NA19130,NA19131,NA19143,NA19152,NA19153,NA19154,NA19171,NA19173,NA19193,NA19194,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19221,NA19222,NA19223,NA19238,NA19239,NA19240 nsv428124 1 90592580 90755887 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450598,nssv450564,nssv450542,nssv450576,nssv450587,nssv450531,nssv450553 M 62 7 0 "" HGDP00449,HGDP01093,HGDP01094,NA18916,NA19113,NA19147,NA19181 esv2763580 1 90597240 90608525 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032390 M 1109 0 1 "" SW_0017 esv3893823 1 90597793 90612855 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796914 M 3017 0 1 "" esv1566075 1 90616913 90616913 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3675572 M 2 1 0 "" HuRef esv1968809 1 90630770 90631244 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4761222 M 1 0 1 "" NA18507 esv3353551 1 90639505 90639645 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740933 M 185 1 0 "" NA12878 esv3307255 1 90687085 90687086 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7740433,essv7743358,essv7748694,essv7749487,essv7752025,essv7762689,essv7742726,essv7757373,essv7751137,essv7747306,essv7750531,essv7748856,essv7756099,essv7748161,essv7758391,essv7762617,essv7754499,essv7756725,essv7754103,essv7745120,essv7743676,essv7743789,essv7762487,essv7748267,essv7753621,essv7759355,essv7749021,essv7757246,essv7751600,essv7748040,essv7753334,essv7744131,essv7749655,essv7755130,essv7761998,essv7757922,essv7761202,essv7759162,essv7750910,essv7756906,essv7752279,essv7753267,essv7746954,essv7762368 M 185 44 0 "" NA07000,NA18508,NA18510,NA18516,NA18523,NA18532,NA18545,NA18547,NA18558,NA18561,NA18562,NA18563,NA18564,NA18571,NA18573,NA18576,NA18577,NA18579,NA18593,NA18603,NA18605,NA18609,NA18853,NA18870,NA18909,NA18940,NA18942,NA18943,NA18947,NA18948,NA18949,NA18951,NA18956,NA18960,NA18961,NA18964,NA18965,NA18973,NA18980,NA19005,NA19093,NA19099,NA19114,NA19257 esv3437318 1 90687096 90687109 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900028,essv8900060,essv8900053,essv8900057,essv8900063,essv8900069,essv8900038,essv8900064,essv8900044,essv8900075,essv8900045,essv8900061,essv8900066,essv8900055,essv8900074,essv8900040,essv8900062,essv8900050,essv8900036,essv8900031,essv8900039,essv8900043,essv8900032,essv8900047,essv8900051,essv8900049,essv8900067,essv8900056,essv8900068,essv8900029,essv8900052,essv8900041,essv8900046,essv8900030,essv8900054,essv8900035,essv8900072,essv8900058,essv8900042,essv8900071,essv8900034,essv8900033,essv8900073,essv8900065 M 185 44 0 "" NA07000,NA18508,NA18510,NA18516,NA18523,NA18532,NA18545,NA18547,NA18558,NA18561,NA18562,NA18563,NA18564,NA18571,NA18573,NA18576,NA18577,NA18579,NA18593,NA18603,NA18605,NA18609,NA18853,NA18870,NA18909,NA18940,NA18942,NA18943,NA18947,NA18948,NA18949,NA18951,NA18956,NA18960,NA18961,NA18964,NA18965,NA18973,NA18980,NA19005,NA19093,NA19099,NA19114,NA19257 esv3429634 1 90698132 90698151 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863727 M 185 1 0 "" NA12005 dgv8n21 1 90876473 90880886 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv526338,nsv520091 M 2026 0 2 "" nsv522034 1 90880569 90883599 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694804 M 2026 0 1 "" nsv474160 1 90883095 90883095 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014878 M 9 1 0 "" NA18507 esv2376491 1 90905109 90905564 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4722668 M 1 0 1 "" NA18507 nsv1004186 1 90907855 90942775 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468139 M 29084 1 0 "" nsv506944 1 90910947 90916947 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619242,nssv623277 M 4 0 0 "" NA10860,NA18994 nsv508024 1 90998556 91004556 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621473 M 4 0 0 "" NA15510 nsv159370 1 91208825 91215100 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177948 M 24 ZNF644 nsv947435 1 91215322 91220294 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765039 M 97 1 0 ZNF644 HGDP00998 nsv946066 1 91261201 91263007 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776376,nssv1776426,nssv1776371,nssv1776387,nssv1776373,nssv1776430,nssv1776368,nssv1776420,nssv1776365,nssv1776448,nssv1776372,nssv1776421,nssv1776385,nssv1776417,nssv1776378,nssv1776452,nssv1776358,nssv1776389,nssv1776441,nssv1776428,nssv1776439,nssv1776413,nssv1776437,nssv1776429,nssv1776381,nssv1776416,nssv1776442,nssv1776394,nssv1776438,nssv1776382,nssv1776440,nssv1776404,nssv1776386,nssv1776444,nssv1776360,nssv1776380,nssv1776362,nssv1776395,nssv1776374,nssv1776400,nssv1776359,nssv1776453,nssv1776369,nssv1776406,nssv1776367,nssv1776446,nssv1776435,nssv1776411,nssv1776363,nssv1776423,nssv1776377,nssv1776398,nssv1776375,nssv1776433,nssv1776361,nssv1776357,nssv1776388,nssv1776450,nssv1776379,nssv1776410,nssv1776364,nssv1776408,nssv1776366,nssv1776449,nssv1776436,nssv1776391,nssv1776434,nssv1776445,nssv1776443,nssv1776402,nssv1776370,nssv1776427,nssv1776409,nssv1776403,nssv1776415,nssv1776447,nssv1776390,nssv1776424,nssv1776418,nssv1776425,nssv1776383,nssv1776407,nssv1776432,nssv1776405,nssv1776399,nssv1776396,nssv1776414,nssv1776431,nssv1776451,nssv1776419,nssv1776422,nssv1776397,nssv1776384,nssv1776393,nssv1776392,nssv1776401,nssv1776412 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546804 1 91296796 91330626 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719086 M 17421 0 1 "" nsv506945 1 91304184 91310184 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619243 M 4 0 0 "" NA10860 nsv546805 1 91309073 91323484 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719087 M 17421 1 0 "" esv2629414 1 91396425 91398037 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5281218 M 1 0 1 "" NA18507 esv2244606 1 91397174 91397853 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4608664 M 1 0 1 "" NA18507 esv6992 1 91397257 91397749 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29433 M 1 0 0 "" esv3593 1 91397323 91397849 CNV loss Wang_et_al_2008 18987735 Sequencing essv26034 M 1 0 1 "" YH esv1206038 1 91397375 91397658 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3957492 M 2 0 1 "" HuRef esv2540009 1 91470595 91471846 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5291173 M 1 0 1 "" NA18507 esv5793 1 91509611 91509762 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28234 M 1 0 0 HFM1 nsv1006022 1 91541228 91603784 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482036 M 29084 0 1 HFM1 nsv546806 1 91552996 91648093 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719088 M 17421 0 1 HFM1 nsv437904 1 91563464 91573795 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv467742,nssv471634 M 269 0 2 HFM1 NA07000,NA07029 nsv946067 1 91566477 91568240 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776605,nssv1776652,nssv1776661,nssv1776629,nssv1776586,nssv1776454,nssv1776601,nssv1776623,nssv1776594,nssv1776614,nssv1776612,nssv1776627,nssv1776658,nssv1776635,nssv1776666,nssv1776630,nssv1776665,nssv1776675,nssv1776595,nssv1776620,nssv1776602,nssv1776672,nssv1776609,nssv1776632,nssv1776610,nssv1776617,nssv1776663,nssv1776608,nssv1776664,nssv1776631,nssv1776457,nssv1776668,nssv1776588,nssv1776621,nssv1776592,nssv1776628,nssv1776662,nssv1776673,nssv1776659,nssv1776613,nssv1776598,nssv1776633,nssv1776455,nssv1776615,nssv1776599,nssv1776650,nssv1776587,nssv1776642,nssv1776597,nssv1776616,nssv1776590,nssv1776670,nssv1776585,nssv1776611,nssv1776596,nssv1776639,nssv1776589,nssv1776648,nssv1776593,nssv1776647,nssv1776667,nssv1776655,nssv1776591,nssv1776657,nssv1776603,nssv1776677,nssv1776600,nssv1776634,nssv1776660,nssv1776656,nssv1776456,nssv1776604,nssv1776622,nssv1776618,nssv1776643,nssv1776651,nssv1776676,nssv1776619,nssv1776640,nssv1776641,nssv1776645,nssv1776624,nssv1776625,nssv1776646,nssv1776606,nssv1776654,nssv1776636,nssv1776649,nssv1776637,nssv1776671,nssv1776644,nssv1776653,nssv1776607,nssv1776669,nssv1776638,nssv1776674,nssv1776626 M 97 10 0 HFM1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv519110 1 91566836 91573534 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696586 M 2026 0 1 HFM1 dgv1n35 1 91625371 91625371 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nsv473786,nsv477339,nsv481561 M 9 2 0 HFM1 NA12156,NA18517 nsv475265 1 91625374 91625374 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019476 M 9 1 0 HFM1 NA19240 nsv473544 1 91625392 91625392 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017372 M 9 1 0 HFM1 NA19129 nsv479129 1 91625407 91625407 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018753 M 9 0 0 HFM1 nsv480471 1 91625435 91625435 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013505 M 9 0 0 HFM1 esv6422 1 91625461 91625618 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28863 M 1 0 0 HFM1 nsv475363 1 91625518 91625518 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018674 M 9 1 0 HFM1 NA19240 nsv472327 1 91625557 91625557 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014554 M 9 1 0 HFM1 NA18555 nsv1005574 1 91686209 91696522 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473795 M 29084 0 1 "" esv6603 1 91686421 91687404 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29044 M 1 0 0 "" esv3976 1 91686630 91687270 CNV loss Wang_et_al_2008 18987735 Sequencing essv26417 M 1 0 1 "" YH esv1004784 1 91686683 91687137 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580538 M 3 0 1 "" HuRef esv1066125 1 91686683 91687138 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4362600 M 2 0 1 "" HuRef esv3423801 1 91711561 91711653 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900077,essv8900076 M 185 2 0 "" NA12003,NA18853 esv3303136 1 91711575 91711576 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7754081,essv7757142 M 185 2 0 "" NA12003,NA18853 esv2452061 1 91741094 91742558 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5197666 M 1 0 1 CDC7 NA18507 nsv946068 1 91772349 91773501 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776703,nssv1775693,nssv1776707,nssv1775706,nssv1776687,nssv1775707,nssv1776683,nssv1776714,nssv1776688,nssv1775739,nssv1775734,nssv1775710,nssv1776684,nssv1775705,nssv1776692,nssv1775686,nssv1776702,nssv1775737,nssv1776686,nssv1775712,nssv1775731,nssv1775740,nssv1775729,nssv1775687,nssv1776709,nssv1776711,nssv1776691,nssv1775717,nssv1776689,nssv1775722,nssv1775725,nssv1775689,nssv1775730,nssv1775698,nssv1776699,nssv1775738,nssv1776695,nssv1776704,nssv1776679,nssv1775718,nssv1776693,nssv1775743,nssv1776696,nssv1775723,nssv1776681,nssv1775697,nssv1776694,nssv1775709,nssv1776706,nssv1775744,nssv1776682,nssv1775690,nssv1776698,nssv1775688,nssv1776700,nssv1775694,nssv1775733,nssv1776705,nssv1776680,nssv1775711,nssv1776685,nssv1775719,nssv1775728,nssv1775741,nssv1776697,nssv1775742,nssv1775732,nssv1775721,nssv1776690,nssv1776710,nssv1775726,nssv1776712,nssv1775727,nssv1776715,nssv1775703,nssv1776708,nssv1776713,nssv1775701,nssv1775735,nssv1775716,nssv1775704,nssv1775724,nssv1775714,nssv1775736,nssv1775700,nssv1775699,nssv1775692,nssv1776678,nssv1775702,nssv1775695,nssv1775691,nssv1775715,nssv1776701,nssv1775713,nssv1775708,nssv1775696,nssv1775720 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946071 1 91833257 91839821 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1775751,nssv1776141,nssv1775767,nssv1776129,nssv1776134,nssv1775771,nssv1775756,nssv1776105,nssv1775769,nssv1776118,nssv1775755,nssv1776106,nssv1776137,nssv1776126,nssv1775758,nssv1776107,nssv1776131,nssv1775770,nssv1776082,nssv1776149,nssv1775766,nssv1776086,nssv1776136,nssv1776098,nssv1775750,nssv1776140,nssv1775746,nssv1776116,nssv1776135,nssv1776147,nssv1775762,nssv1776101,nssv1775748,nssv1776087,nssv1775761,nssv1776090,nssv1775747,nssv1776095,nssv1776133,nssv1776085,nssv1775763,nssv1776100,nssv1775754,nssv1776121,nssv1775765,nssv1776083,nssv1775749,nssv1776093,nssv1775757,nssv1776110,nssv1775753,nssv1776117,nssv1776138,nssv1776124,nssv1775760,nssv1776113,nssv1776081,nssv1775745,nssv1775752,nssv1776114,nssv1776130,nssv1776148,nssv1776132,nssv1776097,nssv1776084,nssv1776128,nssv1775764,nssv1776109,nssv1775759,nssv1776119,nssv1776139,nssv1776091,nssv1776127,nssv1776099,nssv1775768,nssv1776143,nssv1776104,nssv1776145,nssv1776096,nssv1776120,nssv1776088,nssv1776146,nssv1776094,nssv1776123,nssv1776111,nssv1776092,nssv1776115,nssv1776112,nssv1776142,nssv1776144,nssv1776103,nssv1776108,nssv1776122,nssv1776125,nssv1776102,nssv1775772,nssv1776089 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2763581 1 91841555 91976391 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032401 M 1109 1 0 TGFBR3 SW_1051 nsv946072 1 91881009 91882304 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777106,nssv1777097,nssv1777102,nssv1777094,nssv1777053,nssv1777083,nssv1777026,nssv1777059,nssv1777103,nssv1777066,nssv1777055,nssv1777099,nssv1777104,nssv1777096,nssv1777052,nssv1777064,nssv1777109,nssv1777119,nssv1777048,nssv1777075,nssv1777028,nssv1777088,nssv1777036,nssv1777058,nssv1777038,nssv1777071,nssv1777034,nssv1777090,nssv1777032,nssv1777072,nssv1777110,nssv1777092,nssv1777108,nssv1777093,nssv1777025,nssv1777116,nssv1777039,nssv1777047,nssv1777041,nssv1777067,nssv1777044,nssv1777087,nssv1777045,nssv1777100,nssv1777029,nssv1777081,nssv1777105,nssv1777091,nssv1777101,nssv1777080,nssv1777042,nssv1777060,nssv1777030,nssv1777114,nssv1777037,nssv1777118,nssv1777033,nssv1777050,nssv1777040,nssv1777117,nssv1777035,nssv1777073,nssv1777046,nssv1777086,nssv1777107,nssv1777077,nssv1777031,nssv1777089,nssv1777027,nssv1777095,nssv1777043,nssv1777068,nssv1777120,nssv1777098,nssv1777115,nssv1777084,nssv1777070,nssv1777078,nssv1777085,nssv1777111,nssv1777062,nssv1777082,nssv1777065,nssv1777024,nssv1777074,nssv1777061,nssv1777076,nssv1777054,nssv1777049,nssv1777057,nssv1777051,nssv1777069,nssv1777056,nssv1777079,nssv1777112,nssv1777063,nssv1777113 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv7838 1 91896383 91896526 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30279 M 1 0 0 "" nsv513637 1 91901164 91905197 OTHER inversion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626889 M 1 0 0 "" 1 nsv513638 1 91904374 91908304 OTHER inversion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626890 M 1 0 0 "" 1 nsv821208 1 91906517 91907556 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420436 M 1 0 1 "" NA10851 esv2649223 1 91906524 91908255 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5207434 M 1 0 1 "" NA18507 esv28546 1 91906701 91907556 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13624 M 40 0 13 "" NA11894,NA11931,NA12004,NA12156,NA12489,NA12878,NA18505,NA18508,NA18858,NA18907,NA18909,NA19114,NA19240 esv1960868 1 91906713 91907580 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4865496 M 1 0 1 "" NA18507 dgv364n54 1 91906783 91907471 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546809,nsv546807,nsv546808 M 17421 0 4 "" esv988019 1 91906816 91907536 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586761 M 3 0 1 "" HuRef esv1589048 1 91906929 91907541 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4248887 M 2 0 1 "" HuRef nsv528991 1 91964122 91970750 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705693 M 2026 0 1 TGFBR3 dgv365n54 1 91988313 92371293 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546819,nsv546820,nsv546818,nsv546810 M 17421 4 0 BRDT,BTBD8,EPHX4,TGFBR3 1780862574_A nsv462517 1 91988313 92371293 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538662 M 1557 1 0 BRDT,BTBD8,EPHX4,TGFBR3 1780862574_A nsv524845 1 91988313 92371293 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700847 M 2026 1 0 BRDT,BTBD8,EPHX4,TGFBR3 nsv1006318 1 91988996 92380912 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478535,nssv3474855 M 29084 2 0 BRDT,BTBD8,EPHX4,TGFBR3 esv988308 1 92000498 92009523 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563805 M 3 0 1 TGFBR3 HuRef esv989733 1 92004651 92005922 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3582040 M 3 0 1 TGFBR3 HuRef esv25877 1 92004671 92006010 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16892 M 40 0 22 TGFBR3 NA06985,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12156,NA12287,NA12414,NA12489,NA12828,NA12878,NA15510,NA18505,NA18511,NA18909,NA19099,NA19108,NA19257 dgv366n54 1 92004699 92005608 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546813,nsv546812,nsv546811 M 17421 0 3 TGFBR3 dgv367n54 1 92004699 92005868 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546814,nsv546816,nsv546817,nsv546815 M 17421 0 202 TGFBR3 nsv823520 1 92005070 92005913 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430354,nssv1424747,nssv1421458,nssv1424164,nssv1431082 M 31 0 5 TGFBR3 AK16,AK18,AK2,NA18947,NA18997 nsv525320 1 92008636 92010755 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701430 M 2026 0 1 TGFBR3 nsv519291 1 92013273 92021283 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv655226,nssv689194 M 2026 0 2 TGFBR3 nsv474292 1 92032115 92032115 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015906 M 9 1 0 TGFBR3 NA18507 nsv478843 1 92040859 92040859 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016837 M 9 1 0 TGFBR3 NA18507 nsv476538 1 92071753 92071753 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011209 M 9 1 0 TGFBR3 NA12878 nsv1002730 1 92075129 92337817 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465158 M 29084 1 0 BRDT,BTBD8,EPHX4,TGFBR3 nsv830581 1 92089795 92283763 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447795 M 95 0 1 BRDT,EPHX4,TGFBR3 esv2750842 1 92129369 92352263 CNV gain Pinto_et_al_2007 17911159 SNP array essv6988573,essv6988574,essv6982716,essv6986250,essv6982715 M 771 5 0 BRDT,BTBD8,EPHX4,TGFBR3 BEC_583 nsv478392 1 92145688 92145688 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011148 M 9 1 0 "" NA18507 esv3436826 1 92156069 92156069 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740980 M 185 1 0 "" NA19240 nsv1855 1 92283399 92313921 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1257 M 9 1 0 EPHX4 NA19240 nsv1009079 1 92298218 92368257 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482534 M 29084 1 0 BTBD8,EPHX4 nsv546821 1 92298266 92422937 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719301 M 17421 1 0 BTBD8,EPHX4,KIAA1107 nsv946073 1 92308127 92315044 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777129,nssv1777153,nssv1777199,nssv1777144,nssv1777123,nssv1777154,nssv1777152,nssv1777177,nssv1777125,nssv1777210,nssv1777206,nssv1777172,nssv1777126,nssv1777182,nssv1777201,nssv1777217,nssv1777135,nssv1777196,nssv1777149,nssv1777214,nssv1777205,nssv1777161,nssv1777145,nssv1777195,nssv1777132,nssv1777197,nssv1777204,nssv1777160,nssv1777207,nssv1777157,nssv1777138,nssv1777185,nssv1777203,nssv1777189,nssv1777136,nssv1777212,nssv1777131,nssv1777187,nssv1777124,nssv1777216,nssv1777130,nssv1777151,nssv1777202,nssv1777213,nssv1777139,nssv1777190,nssv1777198,nssv1777170,nssv1777122,nssv1777174,nssv1777133,nssv1777194,nssv1777127,nssv1777186,nssv1777150,nssv1777166,nssv1777137,nssv1777191,nssv1777142,nssv1777146,nssv1777200,nssv1777163,nssv1777141,nssv1777158,nssv1777134,nssv1777208,nssv1777128,nssv1777179,nssv1777140,nssv1777209,nssv1777143,nssv1777215,nssv1777178,nssv1777162,nssv1777155,nssv1777147,nssv1777211,nssv1777148,nssv1777183,nssv1777159,nssv1777176,nssv1777175,nssv1777165,nssv1777164,nssv1777173,nssv1777192,nssv1777169,nssv1777167,nssv1777121,nssv1777180,nssv1777184,nssv1777168,nssv1777193,nssv1777181,nssv1777188,nssv1777171,nssv1777156 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3893834 1 92351794 92381440 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25783155,essv25783906,essv25798649,essv25780738 M 3017 0 4 BTBD8 nsv441700 1 92351832 92357103 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656688,nssv1656686,nssv1656687,nssv1656689,nssv1656690 M 270 0 5 BTBD8 NA18853,NA18854,NA19137,NA19139,NA19206 esv2762159 1 92351832 92358667 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005595 M 1109 0 1 BTBD8 RW_0202 nsv946074 1 92352803 92361054 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777303,nssv1777292,nssv1777237,nssv1777263,nssv1777302,nssv1777270,nssv1777223,nssv1777253,nssv1777242,nssv1777268,nssv1777298,nssv1777290,nssv1777246,nssv1777311,nssv1777228,nssv1777288,nssv1777232,nssv1777269,nssv1777226,nssv1777245,nssv1777221,nssv1777248,nssv1777220,nssv1777250,nssv1777229,nssv1777243,nssv1777233,nssv1777285,nssv1777235,nssv1777272,nssv1777301,nssv1777278,nssv1777300,nssv1777251,nssv1777249,nssv1777289,nssv1777299,nssv1777266,nssv1777236,nssv1777313,nssv1777247,nssv1777257,nssv1777219,nssv1777260,nssv1777297,nssv1777308,nssv1777230,nssv1777310,nssv1777222,nssv1777291,nssv1777295,nssv1777306,nssv1777304,nssv1777271,nssv1777234,nssv1777309,nssv1777224,nssv1777279,nssv1777227,nssv1777267,nssv1777239,nssv1777293,nssv1777238,nssv1777312,nssv1777240,nssv1777252,nssv1777225,nssv1777276,nssv1777296,nssv1777280,nssv1777231,nssv1777286,nssv1777255,nssv1777294,nssv1777281,nssv1777254,nssv1777241,nssv1777305,nssv1777244,nssv1777287,nssv1777264,nssv1777307,nssv1777277,nssv1777273,nssv1777262,nssv1777283,nssv1777314,nssv1777258,nssv1777256,nssv1777275,nssv1777218,nssv1777274,nssv1777259,nssv1777265,nssv1777284,nssv1777261,nssv1777282 M 97 10 0 BTBD8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv823531 1 92377578 92378092 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431822 M 31 1 0 BTBD8 AK20 nsv830592 1 92441870 92578217 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447806,nssv1447817,nssv1447828 M 95 3 0 C1orf146,GLMN,RPAP2 esv3302535 1 92451583 92451646 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731426 M 185 1 0 "" NA12878 esv3387554 1 92451600 92451661 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670922 M 185 1 0 "" NA12878 esv1158594 1 92451656 92451656 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4334392 M 2 1 0 "" HuRef esv3410798 1 92451657 92451657 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824828 M 185 1 0 "" NA12878 esv2133890 1 92453758 92454172 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4790795 M 1 0 1 "" NA18507 nsv159130 1 92453942 92453993 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177708 M 24 "" nsv946075 1 92466762 92469573 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778324,nssv1778303,nssv1778258,nssv1778287,nssv1778325,nssv1778274,nssv1777319,nssv1778273,nssv1778321,nssv1778311,nssv1777317,nssv1778330,nssv1778263,nssv1778300,nssv1777329,nssv1778265,nssv1778322,nssv1778292,nssv1777320,nssv1778334,nssv1777321,nssv1778333,nssv1778261,nssv1778283,nssv1778259,nssv1778281,nssv1778256,nssv1778315,nssv1777318,nssv1778297,nssv1778318,nssv1778288,nssv1777325,nssv1778304,nssv1778270,nssv1778314,nssv1777324,nssv1778331,nssv1778257,nssv1778272,nssv1778317,nssv1778305,nssv1778316,nssv1778306,nssv1777328,nssv1778294,nssv1778319,nssv1778295,nssv1778267,nssv1778328,nssv1777330,nssv1778278,nssv1777327,nssv1778266,nssv1777331,nssv1778289,nssv1777316,nssv1778293,nssv1778268,nssv1778312,nssv1777326,nssv1778282,nssv1777323,nssv1778286,nssv1778323,nssv1778299,nssv1777322,nssv1777315,nssv1778260,nssv1778332,nssv1778320,nssv1778291,nssv1778335,nssv1778285,nssv1778280,nssv1778302,nssv1778271,nssv1778307,nssv1778262,nssv1778276,nssv1778269,nssv1778290,nssv1778327,nssv1778329,nssv1778277,nssv1778275,nssv1778309,nssv1778296,nssv1778298,nssv1778310,nssv1778284,nssv1778279,nssv1778264,nssv1778301,nssv1778313,nssv1778308,nssv1778326 M 97 10 0 C1orf146 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv518196 1 92490254 92499728 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695620 M 2026 0 1 GLMN esv3346260 1 92543712 92543738 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863728 M 185 1 0 RPAP2 NA18871 nsv477492 1 92550329 92550329 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011345 M 9 1 0 RPAP2 NA18517 nsv523354 1 92703851 92837411 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699103 M 2026 1 0 EVI5,GFI1 esv2513593 1 92709429 92710830 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5342980 M 1 0 1 "" NA18507 nsv1004381 1 92740761 92837411 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469823 M 29084 1 0 EVI5 nsv830603 1 92776245 92944794 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447839 M 95 0 1 EVI5 nsv475722 1 92893919 92893919 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020261 M 9 1 0 EVI5 NA12878 esv2533438 1 92939497 92940395 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5206076 M 1 1 0 EVI5 NA18507 nsv997898 1 92939716 93000744 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464574 M 29084 1 0 EVI5 esv1001160 1 92940106 92940106 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571023 M 3 1 0 EVI5 HuRef esv3442538 1 92940107 92940111 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674156,essv8674157,essv8674152,essv8674158,essv8674155,essv8674159 M 185 6 0 EVI5 NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv1233172 1 92940108 92940108 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4322889 M 2 1 0 EVI5 HuRef nsv159896 1 92940119 92940119 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178474 M 24 EVI5 nsv1008602 1 92949399 93413396 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478184 M 29084 1 0 EVI5,FAM69A,MTF2,RPL5,SNORA66,SNORD21,TMED5 esv1938423 1 93008511 93014093 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4656585 M 1 0 1 EVI5 NA18507 nsv508393 1 93063101 93117512 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620136 M 4 0 1 FAM69A,RPL5,SNORA66,SNORD21 NA15510 nsv511706 1 93063665 93066984 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626347 M 1 0 1 "" 1 nsv946076 1 93071052 93072277 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778356,nssv1778391,nssv1778418,nssv1778381,nssv1778352,nssv1778363,nssv1778421,nssv1778379,nssv1778355,nssv1778405,nssv1778344,nssv1778389,nssv1778351,nssv1778368,nssv1778343,nssv1778424,nssv1778339,nssv1778429,nssv1778415,nssv1778398,nssv1778337,nssv1778427,nssv1778422,nssv1778377,nssv1778360,nssv1778393,nssv1778420,nssv1778410,nssv1778345,nssv1778387,nssv1778367,nssv1778401,nssv1778342,nssv1778375,nssv1778419,nssv1778430,nssv1778417,nssv1778406,nssv1778347,nssv1778370,nssv1778413,nssv1778372,nssv1778364,nssv1778426,nssv1778365,nssv1778403,nssv1778340,nssv1778388,nssv1778357,nssv1778384,nssv1778341,nssv1778407,nssv1778354,nssv1778374,nssv1778358,nssv1778402,nssv1778416,nssv1778411,nssv1778414,nssv1778400,nssv1778348,nssv1778428,nssv1778338,nssv1778369,nssv1778350,nssv1778399,nssv1778349,nssv1778371,nssv1778353,nssv1778423,nssv1778346,nssv1778366,nssv1778386,nssv1778397,nssv1778378,nssv1778359,nssv1778380,nssv1778404,nssv1778396,nssv1778431,nssv1778412,nssv1778376,nssv1778385,nssv1778432,nssv1778336,nssv1778373,nssv1778392,nssv1778390,nssv1778394,nssv1778408,nssv1778383,nssv1778361,nssv1778409,nssv1778382,nssv1778425,nssv1778395,nssv1778362 M 97 10 0 FAM69A,RPL5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946077 1 93072872 93074557 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778453,nssv1777668,nssv1778449,nssv1777675,nssv1778447,nssv1778463,nssv1778452,nssv1777657,nssv1778441,nssv1777699,nssv1778454,nssv1777683,nssv1778442,nssv1777646,nssv1778448,nssv1778456,nssv1778457,nssv1777682,nssv1778436,nssv1778459,nssv1778446,nssv1777678,nssv1777690,nssv1777680,nssv1777685,nssv1777697,nssv1778434,nssv1777641,nssv1777684,nssv1777654,nssv1777692,nssv1777676,nssv1778443,nssv1777677,nssv1777687,nssv1777698,nssv1777686,nssv1777673,nssv1778435,nssv1777702,nssv1778439,nssv1777696,nssv1778461,nssv1777700,nssv1778440,nssv1777647,nssv1778462,nssv1777649,nssv1777691,nssv1777644,nssv1778438,nssv1777660,nssv1778451,nssv1777640,nssv1778445,nssv1777681,nssv1778437,nssv1777648,nssv1778444,nssv1778460,nssv1777688,nssv1777663,nssv1778455,nssv1777656,nssv1777689,nssv1777650,nssv1778464,nssv1777655,nssv1778450,nssv1777658,nssv1777693,nssv1777670,nssv1777661,nssv1777703,nssv1777653,nssv1777679,nssv1777695,nssv1778458,nssv1777701,nssv1777671,nssv1777652,nssv1777694,nssv1777642,nssv1777659,nssv1777645,nssv1777666,nssv1777664,nssv1777662,nssv1777665,nssv1777651,nssv1777643,nssv1777674,nssv1777672,nssv1778465,nssv1778433,nssv1777667,nssv1777669 M 97 10 0 FAM69A,RPL5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946078 1 93075452 93076168 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777713,nssv1777795,nssv1777726,nssv1777775,nssv1777712,nssv1777796,nssv1777723,nssv1777779,nssv1777783,nssv1777752,nssv1777790,nssv1777769,nssv1777705,nssv1777749,nssv1777725,nssv1777772,nssv1777724,nssv1777768,nssv1777728,nssv1777757,nssv1777715,nssv1777745,nssv1777708,nssv1777743,nssv1777733,nssv1777780,nssv1777787,nssv1777704,nssv1777710,nssv1777761,nssv1777716,nssv1777755,nssv1777735,nssv1777764,nssv1777721,nssv1777770,nssv1777709,nssv1777793,nssv1777784,nssv1777741,nssv1777789,nssv1777753,nssv1777719,nssv1777727,nssv1777732,nssv1777767,nssv1777782,nssv1777747,nssv1777722,nssv1777737,nssv1777718,nssv1777751,nssv1777781,nssv1777731,nssv1777720,nssv1777778,nssv1777717,nssv1777766,nssv1777706,nssv1777765,nssv1777788,nssv1777740,nssv1777785,nssv1777792,nssv1777707,nssv1777746,nssv1777714,nssv1777763,nssv1777786,nssv1777777,nssv1777711,nssv1777736,nssv1777756,nssv1777730,nssv1777762,nssv1777773,nssv1777738,nssv1777754,nssv1777794,nssv1777758,nssv1777739,nssv1777799,nssv1777734,nssv1777776,nssv1777744,nssv1777748,nssv1777729,nssv1777797,nssv1777760,nssv1777791,nssv1777742,nssv1777800,nssv1777750,nssv1777759,nssv1777771,nssv1777774,nssv1777798 M 97 10 0 FAM69A,RPL5,SNORD21 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946079 1 93079776 93080407 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777817,nssv1777897,nssv1777809,nssv1777894,nssv1777883,nssv1777838,nssv1777804,nssv1777840,nssv1777829,nssv1777834,nssv1777887,nssv1777852,nssv1777823,nssv1777889,nssv1777812,nssv1777846,nssv1777814,nssv1777866,nssv1777882,nssv1777824,nssv1777880,nssv1777851,nssv1777825,nssv1777858,nssv1777807,nssv1777826,nssv1777802,nssv1777860,nssv1777884,nssv1777874,nssv1777816,nssv1777862,nssv1777822,nssv1777835,nssv1777818,nssv1777868,nssv1777881,nssv1777863,nssv1777815,nssv1777895,nssv1777806,nssv1777836,nssv1777878,nssv1777876,nssv1777811,nssv1777859,nssv1777820,nssv1777893,nssv1777803,nssv1777864,nssv1777886,nssv1777870,nssv1777819,nssv1777873,nssv1777832,nssv1777833,nssv1777879,nssv1777865,nssv1777810,nssv1777801,nssv1777805,nssv1777844,nssv1777813,nssv1777891,nssv1777885,nssv1777877,nssv1777821,nssv1777839,nssv1777808,nssv1777857,nssv1777830,nssv1777841,nssv1777843,nssv1777855,nssv1777853,nssv1777856,nssv1777867,nssv1777875,nssv1777892,nssv1777872,nssv1777837,nssv1777847,nssv1777896,nssv1777831,nssv1777849,nssv1777888,nssv1777828,nssv1777848,nssv1777850,nssv1777842,nssv1777869,nssv1777871,nssv1777861,nssv1777854,nssv1777890,nssv1777827,nssv1777845 M 97 10 0 FAM69A,RPL5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv506946 1 93091036 93097036 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619244 M 4 0 0 FAM69A NA10860 nsv830614 1 93238566 93451288 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447851 M 95 0 1 CCDC18,MTF2,TMED5 esv2542620 1 93270480 93271435 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5272248 M 1 1 0 "" NA18507 esv1420154 1 93270814 93270814 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3713897 M 2 1 0 "" HuRef nsv508404 1 93319971 93352600 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620137 M 4 0 1 MTF2 NA15510 nsv475764 1 93329588 93329588 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015270 M 9 1 0 MTF2 NA12878 nsv1866 1 93333518 93365481 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10116 M 9 1 0 MTF2 NA18956 nsv830625 1 93338966 93507834 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447862,nssv1447873 M 95 0 2 CCDC18,MTF2,TMED5 esv7743 1 93387223 93387380 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30184 M 1 0 0 "" nsv946080 1 93428958 93429988 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777918,nssv1777930,nssv1777914,nssv1777946,nssv1777908,nssv1778876,nssv1777917,nssv1778910,nssv1777906,nssv1777931,nssv1777904,nssv1777947,nssv1778899,nssv1778878,nssv1777910,nssv1777924,nssv1778907,nssv1777944,nssv1777929,nssv1778892,nssv1777900,nssv1778877,nssv1778906,nssv1778875,nssv1777922,nssv1777933,nssv1777909,nssv1777941,nssv1777927,nssv1777898,nssv1777916,nssv1777943,nssv1777902,nssv1777934,nssv1777920,nssv1777932,nssv1778900,nssv1778880,nssv1778905,nssv1778897,nssv1778904,nssv1777923,nssv1777903,nssv1778887,nssv1778901,nssv1777935,nssv1778902,nssv1778909,nssv1777915,nssv1778891,nssv1777911,nssv1777940,nssv1777899,nssv1778874,nssv1777901,nssv1778889,nssv1778908,nssv1778916,nssv1777907,nssv1777921,nssv1777913,nssv1777938,nssv1777926,nssv1777936,nssv1777912,nssv1778912,nssv1778903,nssv1778895,nssv1777919,nssv1777945,nssv1777905,nssv1778914,nssv1778882,nssv1778872,nssv1777925,nssv1778885,nssv1778873,nssv1777939,nssv1778894,nssv1778881,nssv1778911,nssv1778879,nssv1777937,nssv1778915,nssv1778886,nssv1778917,nssv1778893,nssv1778898,nssv1778888,nssv1778890,nssv1778883,nssv1777942,nssv1777928,nssv1778913,nssv1778918,nssv1778884,nssv1778896 M 97 10 0 CCDC18 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946082 1 93514473 93534021 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778939,nssv1778944,nssv1778935,nssv1778960,nssv1779000,nssv1778969,nssv1778938,nssv1778977,nssv1778927,nssv1778951,nssv1779001,nssv1778990,nssv1778933,nssv1778985,nssv1778920,nssv1779012,nssv1778934,nssv1778981,nssv1778943,nssv1778989,nssv1778929,nssv1778956,nssv1779004,nssv1778958,nssv1778948,nssv1778953,nssv1778925,nssv1778980,nssv1779005,nssv1779010,nssv1778997,nssv1779013,nssv1778932,nssv1778984,nssv1778996,nssv1778952,nssv1778941,nssv1778957,nssv1778999,nssv1779011,nssv1778950,nssv1778964,nssv1778921,nssv1778954,nssv1778926,nssv1778970,nssv1778947,nssv1778992,nssv1778937,nssv1778982,nssv1778931,nssv1778946,nssv1778930,nssv1778965,nssv1778998,nssv1778959,nssv1778923,nssv1778961,nssv1778924,nssv1778942,nssv1779002,nssv1778991,nssv1778940,nssv1779008,nssv1778936,nssv1779015,nssv1778922,nssv1779007,nssv1778928,nssv1778979,nssv1779003,nssv1778976,nssv1778945,nssv1779006,nssv1778955,nssv1779009,nssv1778963,nssv1778978,nssv1779014,nssv1778987,nssv1778975,nssv1778971,nssv1778993,nssv1778974,nssv1778986,nssv1778995,nssv1778972,nssv1778962,nssv1778966,nssv1778973,nssv1778988,nssv1778949,nssv1778994,nssv1778967,nssv1778968,nssv1778919,nssv1778983 M 97 10 0 CCDC18 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3383393 1 93562288 93562314 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863729 M 185 1 0 LOC100131564 NA12005 nsv523951 1 93566439 93567751 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699799 M 2026 1 0 LOC100131564 nsv1011853 1 93739038 93811593 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699601 M 29084 0 1 BCAR3,FNBP1L nsv946083 1 93747702 93756297 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779041,nssv1779053,nssv1777347,nssv1777333,nssv1779036,nssv1779074,nssv1779032,nssv1779052,nssv1777346,nssv1779064,nssv1779026,nssv1779042,nssv1779019,nssv1779046,nssv1777340,nssv1779067,nssv1779035,nssv1779079,nssv1779018,nssv1777336,nssv1779047,nssv1779063,nssv1777341,nssv1779056,nssv1779030,nssv1779072,nssv1779025,nssv1779078,nssv1777344,nssv1779069,nssv1779028,nssv1779065,nssv1779024,nssv1779050,nssv1779031,nssv1779076,nssv1779044,nssv1779048,nssv1777343,nssv1779068,nssv1779034,nssv1779055,nssv1779023,nssv1779049,nssv1777345,nssv1779043,nssv1779033,nssv1779060,nssv1779038,nssv1779066,nssv1779037,nssv1777334,nssv1777342,nssv1779016,nssv1779022,nssv1779077,nssv1779027,nssv1779075,nssv1779029,nssv1779057,nssv1779040,nssv1779062,nssv1779020,nssv1777337,nssv1779017,nssv1779059,nssv1779021,nssv1779039,nssv1777339,nssv1779073,nssv1777338,nssv1779061,nssv1779045,nssv1779051,nssv1779070,nssv1779054,nssv1779071,nssv1777335,nssv1777332,nssv1779058 M 97 10 0 FNBP1L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3403196 1 93790300 93790300 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824836 M 185 1 0 FNBP1L NA12878 esv8503 1 93971734 93971908 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30944 M 1 0 0 BCAR3 esv27510 1 93985447 93986230 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10207 M 40 0 1 BCAR3 NA18858 nsv546822 1 94019165 94062451 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719302 M 17421 1 0 BCAR3 nsv1877 1 94020344 94065496 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4403 M 9 0 1 BCAR3 NA12878 esv2442893 1 94022793 94024382 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5168512 M 1 0 1 BCAR3 NA18507 esv2062392 1 94023845 94024549 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4994824 M 1 0 1 BCAR3 NA18507 esv2595696 1 94024047 94024359 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5375463 M 1 0 1 BCAR3 NA18507 nsv160444 1 94024056 94024368 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179022 M 24 BCAR3 nsv508415 1 94028710 94077927 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618980 M 4 0 1 BCAR3 NA10860 esv1005153 1 94054293 94055950 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565354 M 3 0 1 BCAR3 HuRef esv1003322 1 94058373 94067108 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564045 M 3 0 1 BCAR3 HuRef esv8088 1 94060781 94064085 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30529 M 1 0 0 BCAR3 esv27447 1 94060875 94063950 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13802 M 40 25 4 BCAR3 NA07037,NA07045,NA11931,NA12004,NA12006,NA12044,NA12414,NA12489,NA12776,NA12828,NA12878,NA18502,NA18505,NA18508,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 dgv56n67 1 94060875 94064172 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823542,nsv823553,nsv823564,nsv823575 M 31 0 23 BCAR3 AK10,AK14,AK16,AK18,AK2,AK20,AK4,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18592,NA18947,NA18949,NA18951,NA18968,NA18997,NA18999 nsv821520 1 94060875 94064172 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420447 M 1 0 1 BCAR3 NA10851 esv5334 1 94060904 94063940 CNV loss Wang_et_al_2008 18987735 Sequencing essv27775 M 1 0 1 BCAR3 YH dgv4e180 1 94060915 94063825 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv988321,esv994079 M 3 0 1 BCAR3 HuRef esv33739 1 94060932 94063617 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95718,essv97476,essv94775,essv98762,essv101430,essv101590,essv98493,essv93261,essv100724,essv98580,essv94359,essv101663,essv95703,essv98073,essv97267,essv100334 M 51 9 6 BCAR3 21603,21606,21616,21656,21791,21808,21841,21909,22075,22085,22170,22259,22300,22352 esv1011314 1 94060961 94063844 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578967 M 3 0 1 BCAR3 HuRef esv1112742 1 94060963 94063847 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3749755 M 2 0 1 BCAR3 HuRef dgv368n54 1 94061112 94063059 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546825,nsv546824,nsv546833,nsv546823 M 17421 20 13 BCAR3 dgv369n54 1 94061112 94063671 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546826,nsv546828,nsv546836,nsv546827 M 17421 0 9 BCAR3 nsv546829 1 94061112 94063840 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719548,nssv719546,nssv719547,nssv719545,nssv719554,nssv719549,nssv719553,nssv719569,nssv719551,nssv719550,nssv719552,nssv719555,nssv719568,nssv719558,nssv719556,nssv719557,nssv719559,nssv719567,nssv719562,nssv719561,nssv719560,nssv719563,nssv719566,nssv719565,nssv719564,nssv719572,nssv719571,nssv719570,nssv719578,nssv719573,nssv719577,nssv719575,nssv719574,nssv719576,nssv719579,nssv719582,nssv719580,nssv719581,nssv719342,nssv719379,nssv719340,nssv719426,nssv719341,nssv719347,nssv719354,nssv719346,nssv719343,nssv719344,nssv719355,nssv719345,nssv719349,nssv719348,nssv719353,nssv719352,nssv719351,nssv719350,nssv719359,nssv719363,nssv719356,nssv719378,nssv719367,nssv719357,nssv719358,nssv719361,nssv719362,nssv719360,nssv719364,nssv719366,nssv719365,nssv719370,nssv719373,nssv719377,nssv719369,nssv719368,nssv719371,nssv719372,nssv719376,nssv719374,nssv719375,nssv719396,nssv719380,nssv719382,nssv719389,nssv719381,nssv719425,nssv719383,nssv719388,nssv719385,nssv719384,nssv719387,nssv719386,nssv719392,nssv719391,nssv719390,nssv719395,nssv719394,nssv719393,nssv719397,nssv719424,nssv719407,nssv719398,nssv719400,nssv719406,nssv719399,nssv719401,nssv719402,nssv719405,nssv719403,nssv719404,nssv719410,nssv719423,nssv719408,nssv719413,nssv719409,nssv719412,nssv719411,nssv719418,nssv719417,nssv719414,nssv719422,nssv719416,nssv719415,nssv719421,nssv719420,nssv719419,nssv719543,nssv719427,nssv719428,nssv719430,nssv719481,nssv719429,nssv719453,nssv719432,nssv719433,nssv719431,nssv719544,nssv719439,nssv719438,nssv719437,nssv719435,nssv719434,nssv719436,nssv719449,nssv719442,nssv719441,nssv719452,nssv719440,nssv719443,nssv719444,nssv719447,nssv719448,nssv719446,nssv719445,nssv719451,nssv719450,nssv719455,nssv719454,nssv719456,nssv719462,nssv719480,nssv719457,nssv719458,nssv719461,nssv719460,nssv719459,nssv719470,nssv719463,nssv719464,nssv719465,nssv719479,nssv719469,nssv719466,nssv719467,nssv719468,nssv719471,nssv719478,nssv719473,nssv719472,nssv719474,nssv719477,nssv719476,nssv719475,nssv719490,nssv719482,nssv719487,nssv719483,nssv719486,nssv719542,nssv719485,nssv719512,nssv719484,nssv719498,nssv719489,nssv719488,nssv719492,nssv719491,nssv719497,nssv719494,nssv719493,nssv719495,nssv719496,nssv719507,nssv719501,nssv719500,nssv719499,nssv719511,nssv719502,nssv719506,nssv719503,nssv719504,nssv719505,nssv719510,nssv719508,nssv719509,nssv719513,nssv719516,nssv719541,nssv719522,nssv719530,nssv719515,nssv719514,nssv719521,nssv719518,nssv719517,nssv719520,nssv719519,nssv719524,nssv719527,nssv719523,nssv719526,nssv719525,nssv719529,nssv719528,nssv719531,nssv719540,nssv719533,nssv719532,nssv719537,nssv719534,nssv719539,nssv719536,nssv719535,nssv719538 M 17421 1 242 BCAR3 nsv546830 1 94061112 94064069 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719583 M 17421 0 1 BCAR3 dgv370n54 1 94061112 94067080 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546831,nsv546832 M 17421 0 2 BCAR3 dgv371n54 1 94061258 94062928 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546835,nsv546834,nsv546839 M 17421 0 5 BCAR3 dgv372n54 1 94061258 94063840 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546837,nsv546838 M 17421 3 0 BCAR3 dgv373n54 1 94061523 94063840 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546842,nsv546840,nsv546843,nsv546841 M 17421 0 5 BCAR3 dgv374n54 1 94062220 94063840 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546848,nsv546844,nsv546847,nsv546845,nsv546846 M 17421 0 9 BCAR3 nsv998755 1 94066603 94114300 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479384 M 29084 0 1 BCAR3,DNTTIP2,MIR760 esv33428 1 94076771 94076982 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv99503 M 51 0 1 BCAR3 22335 esv3438453 1 94095852 94096350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692429 M 185 1 0 "" NA19238 dgv143e59 1 94114058 94114359 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3417654,esv3325380 M 185 2 0 DNTTIP2 NA12878,NA19240 esv998151 1 94114256 94115699 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565342 M 3 1 0 DNTTIP2 HuRef nsv523355 1 94123916 94158179 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699104 M 2026 0 1 GCLM esv3435342 1 94147064 94147083 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595657 M 185 1 0 GCLM NA12814 nsv516137 1 94176826 94277133 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701005,nssv667306,nssv666445 M 2026 0 3 ABCA4 esv25414 1 94218459 94219162 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11096 M 40 0 1 "" NA18511 nsv546849 1 94245402 94249820 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719613 M 17421 1 0 ABCA4 nsv546850 1 94252056 94257865 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719614 M 17421 0 1 ABCA4 nsv475023 1 94304104 94304104 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019085 M 9 1 0 ABCA4 NA18956 nsv476507 1 94309980 94309980 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019236 M 9 1 0 ABCA4 NA12878 nsv523430 1 94354837 94364069 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699185 M 2026 0 1 ABCA4 nsv477433 1 94384111 94384111 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017285 M 9 1 0 "" NA18517 nsv1888 1 94465557 94497544 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10121 M 9 1 0 ARHGAP29 NA18956 nsv506947 1 94471906 94477906 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619245,nssv617534,nssv623278,nssv620663 M 4 0 0 ARHGAP29 CHM,NA10860,NA15510,NA18994 nsv160026 1 94533854 94533854 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178604 M 24 "" nsv946084 1 94539280 94542689 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777349,nssv1777395,nssv1777357,nssv1777348,nssv1777351,nssv1777437,nssv1777359,nssv1777391,nssv1777358,nssv1777440,nssv1777367,nssv1777388,nssv1777366,nssv1777417,nssv1777352,nssv1777386,nssv1777425,nssv1777394,nssv1777433,nssv1777442,nssv1777350,nssv1777383,nssv1777431,nssv1777403,nssv1777426,nssv1777385,nssv1777376,nssv1777398,nssv1777353,nssv1777438,nssv1777360,nssv1777392,nssv1777428,nssv1777399,nssv1777365,nssv1777439,nssv1777361,nssv1777378,nssv1777362,nssv1777423,nssv1777368,nssv1777400,nssv1777432,nssv1777416,nssv1777379,nssv1777380,nssv1777429,nssv1777389,nssv1777354,nssv1777412,nssv1777430,nssv1777418,nssv1777356,nssv1777375,nssv1777369,nssv1777393,nssv1777434,nssv1777396,nssv1777364,nssv1777435,nssv1777372,nssv1777381,nssv1777363,nssv1777414,nssv1777377,nssv1777408,nssv1777355,nssv1777404,nssv1777427,nssv1777390,nssv1777370,nssv1777421,nssv1777407,nssv1777406,nssv1777444,nssv1777415,nssv1777436,nssv1777402,nssv1777443,nssv1777373,nssv1777411,nssv1777387,nssv1777405,nssv1777420,nssv1777413,nssv1777410,nssv1777422,nssv1777371,nssv1777397,nssv1777382,nssv1777441,nssv1777424,nssv1777384,nssv1777374,nssv1777409,nssv1777401,nssv1777419 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2040800 1 94622427 94622859 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4881615 M 1 0 1 "" NA18507 nsv946085 1 94639890 94647075 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777523,nssv1777520,nssv1777453,nssv1777534,nssv1777524,nssv1777471,nssv1777450,nssv1777541,nssv1777449,nssv1777537,nssv1777473,nssv1777499,nssv1777446,nssv1777516,nssv1777522,nssv1777515,nssv1777469,nssv1777539,nssv1777455,nssv1777472,nssv1777525,nssv1777489,nssv1777530,nssv1777485,nssv1777474,nssv1777519,nssv1777466,nssv1777488,nssv1777458,nssv1777483,nssv1777531,nssv1777505,nssv1777528,nssv1777532,nssv1777451,nssv1777492,nssv1777462,nssv1777497,nssv1777459,nssv1777468,nssv1777457,nssv1777540,nssv1777476,nssv1777445,nssv1777529,nssv1777475,nssv1777463,nssv1777491,nssv1777526,nssv1777506,nssv1777454,nssv1777501,nssv1777527,nssv1777495,nssv1777460,nssv1777480,nssv1777464,nssv1777493,nssv1777448,nssv1777470,nssv1777461,nssv1777500,nssv1777447,nssv1777496,nssv1777467,nssv1777513,nssv1777456,nssv1777518,nssv1777452,nssv1777503,nssv1777465,nssv1777521,nssv1777494,nssv1777486,nssv1777517,nssv1777482,nssv1777509,nssv1777502,nssv1777533,nssv1777536,nssv1777535,nssv1777478,nssv1777487,nssv1777484,nssv1777507,nssv1777498,nssv1777490,nssv1777514,nssv1777511,nssv1777512,nssv1777508,nssv1777504,nssv1777477,nssv1777510,nssv1777479,nssv1777481,nssv1777538 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv506948 1 94641199 94647199 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617535,nssv623279 M 4 0 0 "" CHM,NA18994 nsv546851 1 94689237 94713964 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719615 M 17421 0 1 ABCD3 esv1930968 1 94715645 94716097 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4629526 M 1 0 1 ABCD3 NA18507 esv3120 1 94715766 94715990 CNV loss Wang_et_al_2008 18987735 Sequencing essv25561 M 1 0 1 ABCD3 YH nsv1899 1 94772965 94802346 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5731 M 9 1 0 F3 NA19129 nsv519997 1 94856424 94886005 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv682195,nssv660008 M 2026 2 0 "" nsv1001230 1 94857772 94881119 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465529 M 29084 1 0 "" nsv1910 1 94872971 94884460 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7369 M 9 0 1 "" NA12156 esv2758950 1 94892378 94931191 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756851 M 270 0 5 LINC01057 NA18503,NA18855,NA19141,NA19142,NA19153 nsv462528 1 94895106 94915431 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538669 M 1557 0 1 LINC01057 NINDS_196 nsv546852 1 94895106 94915431 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173062 M 17421 0 1 LINC01057 NINDS_196 nsv437227 1 94895153 94916136 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467108 M 60 0 1 LINC01057 NA18503 dgv208n100 1 94898553 94928173 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004540,nsv1000486,nsv1013700,nsv1009168,nsv1013295,nsv1000399,nsv998738,nsv1001602,nsv1001354,nsv1002560,nsv999580,nsv997636,nsv1014173,nsv1013150,nsv1004829,nsv1011128,nsv1012925,nsv1009765,nsv1010621,nsv1002928,nsv1013561,nsv1007625,nsv1003354 M 29084 0 110 LINC01057 nsv546853 1 94900051 94926867 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173063 M 17421 0 1 LINC01057 HGDP00921 nsv517330 1 94901134 94925850 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv684295,nssv676041,nssv692602,nssv690090,nssv679672,nssv688252,nssv679707,nssv674073,nssv651765,nssv651736,nssv676921,nssv663391,nssv689057,nssv693954,nssv669860,nssv665818,nssv682479,nssv683852,nssv686522,nssv652159,nssv673773,nssv674890,nssv667439,nssv653383,nssv682512,nssv676310,nssv689497,nssv687433,nssv668801,nssv671038,nssv659108 M 2026 0 31 LINC01057 nsv436535 1 94901379 94927828 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466162 M 2 0 1 LINC01057 NA18505 esv2421913 1 94903266 94926867 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5093302,essv5021609,essv5116417,essv5055537,essv5048309,essv5111271,essv5107250,essv5116224,essv5007392,essv5105619,essv5040433,essv5100660,essv5160942,essv5030523,essv5136635,essv5126136,essv5029954,essv5132299,essv5010555,essv5067255,essv5135292,essv5091332 M 1184 0 22 LINC01057 NA18487,NA18498,NA18503,NA18505,NA18855,NA18916,NA18923,NA19107,NA19109,NA19142,NA19153,NA19175,NA19390,NA19393,NA19398,NA19434,NA20317,NA20360,NA21414,NA21491,NA21620,NA21741 esv2764194 1 94903266 94928185 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005605,essv7005597,essv7005607,essv7005598,essv7005606,essv7005596,essv7005608,essv7005602,essv7005604,essv7005601,essv7005599,essv7005603 M 1109 0 12 LINC01057 RW_0022,RW_0098,RW_0119,RW_0179,RW_0200,RW_0215,RW_0227,RW_0311,RW_0323,RW_0333,RW_0512,RW_0583 nsv442927 1 94903354 94927987 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1618211,nssv1618212,nssv1618214,nssv1618215,nssv1618217,nssv1618216 M 270 0 6 LINC01057 NA18503,NA18505,NA18855,NA19141,NA19142,NA19153 nsv470726 1 94904517 94925850 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547753,nssv547754,nssv547755,nssv547752 M 443 0 4 LINC01057 HGDP00921,HGDP00924,HGDP00939,HGDP01031 nsv818267 1 94904517 94925850 CNV loss Wang_et_al_2007 17921354 SNP array nssv1418370,nssv1416292,nssv1418359 M 112 0 3 LINC01057 NA18855,NA19141,NA19142 dgv23n27 1 94904517 94926867 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv462550,nsv462561,nsv462539 M 1557 0 3 LINC01057 HGDP00924,HGDP00939,HGDP01031 dgv375n54 1 94904517 94926867 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546858,nsv546854,nsv546857,nsv546855,nsv546856 M 17421 0 7 LINC01057 HGDP00924,HGDP00939,HGDP01031 nsv513993 1 94905120 94927544 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2861547,nssv2863600,nssv2862337,nssv2865927,nssv2859735,nssv2863185,nssv2865270,nssv2864083,nssv2859339,nssv2860165,nssv2864500,nssv2861640,nssv2867965 M 2366 0 13 LINC01057 NA18487,NA18498,NA18503,NA18855,NA18908,NA18916,NA18923,NA19107,NA19109,NA19141,NA19142,NA19153,NA19175 esv34973 1 94906767 94924401 CNV loss Pinto_et_al_2007 17911159 SNP array essv6989206,essv6987871 M 771 0 2 LINC01057 NA19141 esv28208 1 94907386 94928588 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12694 M 40 0 2 LINC01057 NA18505,NA18916 nsv437915 1 94910672 94925850 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv467775,nssv467764,nssv467786,nssv467797,nssv467808,nssv467753 M 269 0 4 LINC01057 NA18503,NA18505,NA19141,NA19142 nsv437229 1 94919152 94925850 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467110 M 60 0 1 LINC01057 NA19142 nsv437228 1 94919152 94937024 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467109 M 60 0 1 LINC01057 NA18503 nsv10372 1 94929786 94931628 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv12755,nssv15110,nssv14756,nssv19414,nssv16097,nssv15439,nssv18074,nssv15121 M 31 8 0 LINC01057 NA10839,NA10847,NA18517,NA18563,NA18572,NA18853,NA19007,NA19240 nsv1001043 1 94930630 94958494 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466109 M 29084 1 0 LINC01057 nsv506949 1 95070655 95076655 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619246 M 4 0 0 SLC44A3 NA10860 esv3382096 1 95107821 95107840 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595669 M 185 1 0 SLC44A3 NA12249 esv3307879 1 95115273 95115274 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7819619,essv7828828,essv7822253,essv7810110,essv7801472,essv7834636,essv7829533,essv7822956,essv7806633,essv7835914,essv7788010,essv7830394,essv7797774,essv7811678,essv7820999,essv7827090,essv7823904,essv7771910,essv7770593,essv7797649,essv7791024,essv7824626,essv7773017,essv7795950,essv7815029,essv7801741,essv7794581,essv7799380,essv7792556 M 185 29 0 SLC44A3 NA07347,NA11894,NA11919,NA11992,NA11994,NA11995,NA12003,NA12044,NA12414,NA12489,NA12717,NA12776,NA12815,NA18545,NA18547,NA18558,NA18563,NA18571,NA18572,NA18582,NA18603,NA18608,NA18609,NA18940,NA18943,NA18948,NA18969,NA18970,NA18973 esv3357039 1 95115278 95115288 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900216,essv8900215,essv8900228,essv8900221,essv8900213,essv8900218,essv8900229,essv8900219,essv8900222,essv8900220,essv8900212,essv8900235,essv8900233,essv8900210,essv8900224,essv8900209,essv8900223,essv8900230,essv8900211,essv8900227,essv8900234,essv8900217,essv8900231,essv8900232 M 185 24 0 SLC44A3 NA11919,NA11992,NA11994,NA11995,NA12003,NA12044,NA12414,NA12489,NA12717,NA12776,NA18545,NA18547,NA18558,NA18563,NA18571,NA18572,NA18582,NA18603,NA18608,NA18609,NA18940,NA18943,NA18948,NA18973 esv3341362 1 95115279 95115298 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595691,essv9595680 M 185 2 0 SLC44A3 NA11894,NA18970 nsv830636 1 95268437 95475714 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447884,nssv1447895,nssv1447906 M 95 0 3 ALG14,RWDD3,TMEM56,TMEM56-RWDD3 esv993631 1 95284029 95284029 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583009 M 3 1 0 ALG14 HuRef esv1116942 1 95284124 95284124 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3946796 M 2 1 0 ALG14 HuRef esv5799 1 95294768 95298755 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28240 M 1 0 0 ALG14 nsv498675 1 95294847 95298528 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585387 M 9 0 1 ALG14 dgv57n67 1 95295609 95298495 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823598,nsv823587 M 31 0 9 ALG14 AK4,AK8,NA18537,NA18547,NA18592,NA18942,NA18972,NA18973,NA18999 nsv513994 1 95295808 95298528 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2867073,nssv2866667,nssv2865372,nssv2863769,nssv2861875,nssv2863118,nssv2864189,nssv2865624,nssv2863479,nssv2861619,nssv2859635,nssv2864993,nssv2862703,nssv2867283,nssv2860584,nssv2864688,nssv2858636,nssv2861174,nssv2858748,nssv2867257 M 2366 0 20 ALG14 NA18532,NA18537,NA18547,NA18563,NA18592,NA18603,NA18608,NA18620,NA18942,NA18956,NA18960,NA18967,NA18970,NA18972,NA18973,NA18981,NA18987,NA18994,NA18999,NA19007 nsv823609 1 95355206 95356335 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431824 M 31 0 1 TMEM56,TMEM56-RWDD3 AK20 esv2641534 1 95462611 95464265 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282920 M 1 0 1 TMEM56-RWDD3 NA18507 esv2291039 1 95462944 95463563 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4780076 M 1 0 1 TMEM56-RWDD3 NA18507 esv4625 1 95463045 95463609 CNV loss Wang_et_al_2008 18987735 Sequencing essv27066 M 1 0 1 TMEM56-RWDD3 YH nsv160810 1 95463099 95463417 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179388 M 24 TMEM56-RWDD3 nsv823620 1 95485314 95485776 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1424749 M 31 1 0 RWDD3 AK2 nsv10384 1 95525331 95539837 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv18090 M 31 0 1 "" NA19221 nsv830648 1 95532750 95698852 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447917 M 95 1 0 "" nsv1006113 1 95541090 95911591 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466626 M 29084 1 0 FLJ31662 nsv529002 1 95553805 95577590 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705709 M 2026 1 0 "" nsv1921 1 95563395 95593001 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6770 M 9 1 0 "" NA12156 esv3448097 1 95574427 95574446 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595702,essv9595713 M 185 2 0 "" NA11894,NA12812 nsv1013985 1 95588781 95618194 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477955 M 29084 1 0 "" nsv1006631 1 95712355 95775840 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699602 M 29084 1 0 FLJ31662 nsv1003506 1 95815598 95838042 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466285 M 29084 0 1 "" nsv1932 1 95821976 95852980 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10136 M 9 1 0 "" NA18956 nsv528711 1 95860780 95912608 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705361 M 2026 0 1 "" nsv524690 1 95912608 95916021 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700662 M 2026 0 1 "" nsv520561 1 95926933 95927332 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv672546,nssv682567 M 2026 0 2 "" nsv1943 1 95963139 95995350 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10141 M 9 1 0 "" NA18956 nsv546859 1 96027653 96057219 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719620 M 17421 0 1 "" esv2422262 1 96033916 96165291 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161551 M 181 1 0 "" ND03704 nsv517226 1 96069014 96078021 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv676841,nssv663535,nssv687390,nssv685283,nssv652160,nssv654067,nssv671039,nssv656771,nssv669918 M 2026 0 9 "" nsv546860 1 96069526 96126565 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719621 M 17421 0 1 "" nsv830659 1 96167308 96321508 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447928 M 95 1 0 "" esv3421424 1 96176342 96176357 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900242,essv8900245,essv8900236,essv8900240,essv8900243,essv8900244,essv8900241,essv8900239,essv8900246,essv8900238,essv8900247 M 185 11 0 "" NA18499,NA18502,NA18507,NA18508,NA18520,NA18523,NA18870,NA18871,NA19093,NA19116,NA19225 esv3306508 1 96176343 96176344 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759110,essv7747849,essv7741676,essv7756284,essv7754977,essv7741449,essv7742471,essv7760304,essv7761418,essv7749823,essv7751424 M 185 11 0 "" NA18499,NA18502,NA18507,NA18508,NA18520,NA18523,NA18870,NA18871,NA19093,NA19116,NA19225 esv2758951 1 96188339 96318702 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757741 M 270 1 0 "" NA18561 nsv946087 1 96203879 96205028 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777614,nssv1777568,nssv1777573,nssv1777554,nssv1777604,nssv1777562,nssv1777615,nssv1777551,nssv1777618,nssv1777572,nssv1777582,nssv1777556,nssv1777638,nssv1777558,nssv1777597,nssv1777545,nssv1777596,nssv1777552,nssv1777600,nssv1777574,nssv1777598,nssv1777549,nssv1777583,nssv1777547,nssv1777586,nssv1777625,nssv1777592,nssv1777546,nssv1777639,nssv1777621,nssv1777631,nssv1777620,nssv1777543,nssv1777626,nssv1777581,nssv1777628,nssv1777619,nssv1777544,nssv1777587,nssv1777564,nssv1777630,nssv1777563,nssv1777569,nssv1777560,nssv1777613,nssv1777555,nssv1777612,nssv1777548,nssv1777590,nssv1777623,nssv1777617,nssv1777571,nssv1777601,nssv1777557,nssv1777636,nssv1777561,nssv1777616,nssv1777565,nssv1777594,nssv1777553,nssv1777589,nssv1777627,nssv1777608,nssv1777629,nssv1777578,nssv1777624,nssv1777605,nssv1777559,nssv1777575,nssv1777622,nssv1777570,nssv1777567,nssv1777607,nssv1777550,nssv1777593,nssv1777632,nssv1777633,nssv1777610,nssv1777576,nssv1777585,nssv1777595,nssv1777599,nssv1777579,nssv1777634,nssv1777580,nssv1777591,nssv1777603,nssv1777584,nssv1777637,nssv1777588,nssv1777577,nssv1777609,nssv1777611,nssv1777602,nssv1777566,nssv1777635,nssv1777606 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2625541 1 96218596 96219615 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5247375 M 1 1 0 "" NA18507 nsv998536 1 96253306 96271382 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479170 M 29084 1 0 "" esv1921051 1 96255510 96255931 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4923634 M 1 0 1 "" NA18507 nsv159649 1 96255669 96255752 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178227 M 24 "" esv1671934 1 96255714 96255796 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4314688 M 2 0 1 "" HuRef nsv160662 1 96255788 96255847 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179240 M 24 "" nsv10395 1 96258416 96261328 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv18450 M 31 0 1 "" NA19221 esv3351918 1 96272853 96272871 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674167 M 185 1 0 "" NA19238 esv3309425 1 96272858 96272859 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838514,essv7836653 M 185 2 0 "" NA19238,NA19239 esv32612 1 96297173 96303501 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv94337,essv100304 M 51 2 0 "" 21808,22300 nsv830670 1 96313768 96498068 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1447939 M 95 1 0 "" nsv478433 1 96359941 96359941 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018764 M 9 1 0 "" NA18507 nsv477205 1 96373544 96373544 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013518 M 9 1 0 "" NA18517 nsv999216 1 96486291 96537903 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478218,nssv3481435 M 29084 2 0 "" esv1162130 1 96503844 96503844 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4259117 M 2 1 0 "" HuRef esv1563982 1 96504023 96504023 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4271679 M 2 1 0 "" HuRef nsv428135 1 96611970 96626934 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450609 M 62 1 0 "" NA19113 esv1451799 1 96641529 96641529 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3720085 M 2 1 0 "" HuRef nsv946088 1 96683832 96691599 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778646,nssv1778613,nssv1778578,nssv1778590,nssv1778584,nssv1778594,nssv1778645,nssv1778607,nssv1778571,nssv1778602,nssv1778580,nssv1778635,nssv1778583,nssv1778614,nssv1778595,nssv1778608,nssv1778573,nssv1778612,nssv1778649,nssv1778639,nssv1778574,nssv1778653,nssv1778588,nssv1778634,nssv1778641,nssv1778654,nssv1778585,nssv1778659,nssv1778647,nssv1778618,nssv1778567,nssv1778625,nssv1778593,nssv1778629,nssv1778581,nssv1778601,nssv1778643,nssv1778617,nssv1778576,nssv1778660,nssv1778565,nssv1778604,nssv1778579,nssv1778631,nssv1778566,nssv1778651,nssv1778582,nssv1778589,nssv1778577,nssv1778600,nssv1778569,nssv1778620,nssv1778568,nssv1778611,nssv1778575,nssv1778605,nssv1778648,nssv1778656,nssv1778650,nssv1778596,nssv1778570,nssv1778637,nssv1778642,nssv1778597,nssv1778644,nssv1778658,nssv1778592,nssv1778657,nssv1778586,nssv1778619,nssv1778572,nssv1778598,nssv1778621,nssv1778636,nssv1778599,nssv1778655,nssv1778627,nssv1778615,nssv1778624,nssv1778638,nssv1778640,nssv1778606,nssv1778616,nssv1778628,nssv1778603,nssv1778630,nssv1778626,nssv1778587,nssv1778610,nssv1778622,nssv1778632,nssv1778623,nssv1778633,nssv1778591,nssv1778652,nssv1778609,nssv1778564 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1958733 1 96762259 96762693 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4733837 M 1 0 1 "" NA18507 nsv1954 1 96855710 96900674 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7383 M 9 0 1 "" NA12156 nsv946089 1 96916025 96919961 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778686,nssv1778661,nssv1778747,nssv1778698,nssv1778662,nssv1778708,nssv1778742,nssv1778732,nssv1778681,nssv1778707,nssv1778677,nssv1778748,nssv1778680,nssv1778719,nssv1778745,nssv1778687,nssv1778669,nssv1778701,nssv1778675,nssv1778700,nssv1778663,nssv1778749,nssv1778690,nssv1778704,nssv1778673,nssv1778751,nssv1778692,nssv1778729,nssv1778743,nssv1778733,nssv1778685,nssv1778721,nssv1778739,nssv1778710,nssv1778682,nssv1778750,nssv1778666,nssv1778716,nssv1778744,nssv1778755,nssv1778664,nssv1778735,nssv1778674,nssv1778728,nssv1778678,nssv1778714,nssv1778740,nssv1778757,nssv1778738,nssv1778736,nssv1778671,nssv1778703,nssv1778679,nssv1778756,nssv1778672,nssv1778752,nssv1778689,nssv1778709,nssv1778665,nssv1778726,nssv1778668,nssv1778737,nssv1778683,nssv1778696,nssv1778670,nssv1778706,nssv1778676,nssv1778691,nssv1778667,nssv1778711,nssv1778741,nssv1778688,nssv1778746,nssv1778753,nssv1778725,nssv1778702,nssv1778694,nssv1778684,nssv1778715,nssv1778723,nssv1778699,nssv1778731,nssv1778722,nssv1778697,nssv1778713,nssv1778695,nssv1778693,nssv1778712,nssv1778734,nssv1778724,nssv1778705,nssv1778754,nssv1778720,nssv1778718,nssv1778730,nssv1778727,nssv1778717 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv830681 1 96938374 97110652 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1447962,nssv1447950 M 95 0 2 PTBP2 esv2540979 1 97041183 97042182 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5347653 M 1 1 0 PTBP2 NA18507 esv3348431 1 97041700 97041722 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900249,essv8900251,essv8900252,essv8900250 M 185 4 0 PTBP2 NA18505,NA18507,NA18907,NA19108 nsv1966 1 97060429 97105088 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7392 M 9 0 1 "" NA12156 nsv522619 1 97213485 97219771 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv706015 M 2026 0 1 "" nsv1977 1 97222772 97247205 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10147 M 9 1 0 "" NA18956 nsv830692 1 97274080 97397741 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1447973,nssv1447984 M 95 1 1 DPYD,DPYD-AS1 esv7816 1 97283457 97284450 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30257 M 1 0 0 "" esv3450982 1 97324913 97324918 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863730 M 185 1 0 DPYD NA12005 esv2523572 1 97368502 97369895 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5348872 M 1 0 1 DPYD,DPYD-AS1 NA18507 esv2167618 1 97368752 97369166 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4994144 M 1 0 1 DPYD,DPYD-AS1 NA18507 nsv546861 1 97449107 97458624 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719622 M 17421 0 1 DPYD,DPYD-AS1 nsv546862 1 97453930 97458580 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719623 M 17421 0 1 DPYD,DPYD-AS1 nsv546863 1 97453930 97463593 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719626,nssv719625,nssv719624,nssv719627 M 17421 0 4 DPYD,DPYD-AS1 nsv470728 1 97475913 97534560 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547757 M 443 0 1 DPYD,DPYD-AS1 HGDP01397 esv3347093 1 97490207 97490226 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595724 M 185 1 0 DPYD,DPYD-AS1 NA11881 esv3422699 1 97490208 97490217 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900258,essv8900257,essv8900254,essv8900255,essv8900253,essv8900261,essv8900260,essv8900256,essv8900262 M 185 9 0 DPYD,DPYD-AS1 NA11881,NA11918,NA11919,NA11931,NA12006,NA12749,NA18489,NA18508,NA18871 esv3307080 1 97490213 97490214 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7802199,essv7811303,essv7783947,essv7793098,essv7773620,essv7825851,essv7800465,essv7780872,essv7795716,essv7777124 M 185 10 0 DPYD,DPYD-AS1 NA11881,NA11918,NA11919,NA11931,NA12006,NA12045,NA12749,NA18489,NA18508,NA18871 nsv546864 1 97516636 97536661 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719628 M 17421 0 1 DPYD,DPYD-AS1 nsv1988 1 97531295 97561135 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10150 M 9 1 0 DPYD,DPYD-AS1 NA18956 nsv477329 1 97562218 97562218 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010737 M 9 1 0 DPYD NA18517 nsv546865 1 97611475 97647251 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719629 M 17421 0 1 DPYD nsv477206 1 97616641 97616641 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011079 M 9 1 0 DPYD NA18517 nsv830703 1 97680296 97873732 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1448028,nssv1448017,nssv1448006,nssv1447995,nssv1448039 M 95 2 3 DPYD nsv519191 1 97717880 97773449 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696674 M 2026 0 1 DPYD nsv476745 1 97729932 97729932 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014519 M 9 1 0 DPYD NA12878 nsv1999 1 97752143 97780408 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10951 M 9 1 0 DPYD NA15510 nsv160842 1 97763944 97764122 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179420 M 24 DPYD esv3434662 1 97771057 97771064 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863731 M 185 1 0 DPYD NA12005 nsv546866 1 97776496 97851581 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719630 M 17421 0 1 DPYD nsv830714 1 97797678 98002004 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448050 M 95 1 0 DPYD nsv528034 1 97810767 97814308 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704566 M 2026 1 0 DPYD dgv9n21 1 97810767 97823244 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv518604,nsv521057 M 2026 3 0 DPYD esv3347076 1 97831590 97831652 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900263,essv8900264 M 185 2 0 DPYD NA18501,NA18516 esv3304677 1 97831599 97831600 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760094,essv7749483 M 185 2 0 DPYD NA18501,NA18516 nsv546867 1 97856957 97884518 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719631 M 17421 0 1 DPYD nsv2010 1 97895704 97940014 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2217 M 9 0 1 DPYD NA18555 nsv546868 1 97948466 97967433 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719632 M 17421 0 1 DPYD esv3384589 1 97986554 97986554 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808985 M 185 1 0 DPYD NA12878 esv8104 1 97995253 97995431 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30545 M 1 0 0 DPYD dgv376n54 1 98025993 98109871 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546869,nsv546870,nsv546871 M 17421 0 3 DPYD nsv830725 1 98030482 98216085 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448061 M 95 0 1 DPYD nsv462572 1 98056442 98120363 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538705 M 1557 0 1 DPYD NINDS_199 dgv377n54 1 98056442 98121473 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546872,nsv546873 M 17421 0 2 DPYD NINDS_199 nsv2021 1 98074235 98108111 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3004 M 9 1 0 DPYD NA18555 nsv2032 1 98092439 98141873 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9547 M 9 0 1 DPYD NA18507 nsv470729 1 98234031 98337324 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547758 M 443 0 1 MIR137,MIR137HG,MIR2682 HGDP00876 nsv546874 1 98234031 98337324 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719637 M 17421 0 1 MIR137,MIR137HG,MIR2682 nsv830736 1 98261079 98436314 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448073 M 95 1 0 MIR137,MIR137HG,MIR2682 nsv819568 1 98282476 98284000 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419278 M 2 1 0 MIR137HG,MIR2682 AK1 nsv436623 1 98326518 98333214 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466173 M 2 0 1 "" NA18505 nsv823631 1 98326845 98460573 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440821 M 31 0 1 LOC729987 NA18969 nsv546875 1 98326997 98417801 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719638 M 17421 0 1 "" nsv525582 1 98365218 98368441 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701721 M 2026 0 1 "" nsv524846 1 98365218 98371040 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700848 M 2026 0 1 "" dgv10n21 1 98365218 98378001 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv524889,nsv523942 M 2026 2 0 "" nsv1007861 1 98373835 98405551 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3476101 M 29084 0 1 "" esv2462473 1 98377213 98378274 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5183775 M 1 1 0 "" NA18507 esv3417764 1 98377860 98377879 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595735,essv9595746 M 185 2 0 "" NA11881,NA19143 esv3303642 1 98377869 98377870 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7817030,essv7776701,essv7818896,essv7794040,essv7803638,essv7777378,essv7782943,essv7776127,essv7789858,essv7790742,essv7835775,essv7800395,essv7823796,essv7795906,essv7807259,essv7797660,essv7794784,essv7772626,essv7824485,essv7835216,essv7826472,essv7827317,essv7815222,essv7788552,essv7808295,essv7789277,essv7793712,essv7775352,essv7826228,essv7796543,essv7791292,essv7814548,essv7792949,essv7783480,essv7804523,essv7830952,essv7816867,essv7832012,essv7822340,essv7773410,essv7812339,essv7788125,essv7808705,essv7782273,essv7774964,essv7816303,essv7775576,essv7818282,essv7791959,essv7827946,essv7784462,essv7799447,essv7826659,essv7822893,essv7825310,essv7791688,essv7829445,essv7803887,essv7832616,essv7825396,essv7823391,essv7823135,essv7777817,essv7812966,essv7829847 M 185 65 0 "" NA06986,NA07000,NA07357,NA11831,NA11881,NA11918,NA11919,NA11920,NA11992,NA12043,NA12044,NA12144,NA12156,NA12287,NA12761,NA12763,NA18489,NA18501,NA18502,NA18505,NA18508,NA18511,NA18517,NA18519,NA18520,NA18523,NA18532,NA18537,NA18547,NA18552,NA18555,NA18562,NA18564,NA18570,NA18572,NA18573,NA18577,NA18582,NA18592,NA18593,NA18608,NA18609,NA18638,NA18853,NA18861,NA18909,NA18947,NA18948,NA18951,NA18953,NA18960,NA18961,NA18965,NA19102,NA19108,NA19114,NA19116,NA19129,NA19138,NA19141,NA19143,NA19147,NA19225,NA19238,NA19239 esv3398076 1 98377870 98377882 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900315,essv8900280,essv8900295,essv8900329,essv8900268,essv8900298,essv8900324,essv8900293,essv8900289,essv8900309,essv8900282,essv8900310,essv8900290,essv8900318,essv8900294,essv8900279,essv8900267,essv8900316,essv8900302,essv8900291,essv8900274,essv8900307,essv8900300,essv8900275,essv8900296,essv8900284,essv8900304,essv8900313,essv8900322,essv8900283,essv8900327,essv8900285,essv8900323,essv8900311,essv8900265,essv8900320,essv8900277,essv8900287,essv8900271,essv8900305,essv8900321,essv8900317,essv8900269,essv8900273,essv8900288,essv8900330,essv8900326,essv8900278,essv8900286,essv8900306,essv8900299,essv8900301,essv8900266,essv8900297,essv8900319,essv8900276,essv8900328,essv8900308,essv8900272,essv8900312 M 185 60 0 "" NA06986,NA07000,NA07357,NA11831,NA11918,NA11919,NA11920,NA11992,NA12043,NA12044,NA12144,NA12156,NA12287,NA12761,NA12763,NA18489,NA18501,NA18502,NA18505,NA18508,NA18511,NA18517,NA18519,NA18520,NA18523,NA18532,NA18537,NA18547,NA18552,NA18555,NA18562,NA18564,NA18570,NA18572,NA18573,NA18577,NA18582,NA18592,NA18593,NA18608,NA18609,NA18638,NA18853,NA18861,NA18909,NA18947,NA18948,NA18951,NA18953,NA18960,NA18961,NA18965,NA19102,NA19108,NA19114,NA19116,NA19129,NA19138,NA19147,NA19225 esv3307972 1 98377872 98377873 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838969 M 185 1 0 "" NA19238 esv3411533 1 98377873 98377887 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674169,essv8674168 M 185 2 0 "" NA19238,NA19239 nsv1010393 1 98416272 98471145 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470782 M 29084 1 0 LOC729987 esv3383672 1 98453678 98453678 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701376 M 185 1 0 LOC729987 NA12878 nsv998403 1 98479481 98577489 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699603 M 29084 1 0 LOC729987 nsv2043 1 98544285 98578621 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3009 M 9 1 0 "" NA18555 nsv2054 1 98653540 98654684 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4420 M 9 1 0 "" NA12878 esv3441893 1 98670444 98670457 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863733 M 185 1 0 "" NA12005 esv1593722 1 98741714 98741714 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3931191 M 2 1 0 "" HuRef esv1639972 1 98741735 98741735 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4282738 M 2 1 0 "" HuRef esv1655934 1 98750647 98750647 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3945568 M 2 1 0 "" HuRef esv1030578 1 98751181 98751181 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4056629 M 2 1 0 "" HuRef nsv830747 1 98755688 98921000 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448084 M 95 0 1 SNX7 nsv1010934 1 98902091 98949904 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470933 M 29084 0 1 SNX7 nsv830760 1 98968667 99137140 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448095 M 95 1 0 LPPR5,SNX7 nsv2065 1 98991191 99035881 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7398 M 9 0 1 SNX7 NA12156 nsv830771 1 99116109 99288114 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448106 M 95 0 1 LOC100129620,LPPR5 esv26224 1 99177456 99179919 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14053 M 40 0 1 LPPR5 NA12489 nsv546876 1 99177544 99178956 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719639 M 17421 0 1 LPPR5 dgv378n54 1 99177544 99179939 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546880,nsv546877,nsv546883,nsv546882,nsv546878,nsv546879,nsv546881 M 17421 0 21 LPPR5 esv33622 1 99177620 99178163 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv99404 M 51 0 1 LPPR5 22335 nsv546884 1 99225875 99300507 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719661 M 17421 0 1 LOC100129620,LPPR5 nsv946090 1 99245903 99246788 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776726,nssv1776765,nssv1776730,nssv1776740,nssv1776781,nssv1776788,nssv1776729,nssv1776775,nssv1776783,nssv1776758,nssv1776778,nssv1776727,nssv1778764,nssv1776793,nssv1778766,nssv1776756,nssv1778772,nssv1776742,nssv1776780,nssv1776744,nssv1778770,nssv1776791,nssv1778765,nssv1776764,nssv1776732,nssv1776747,nssv1776785,nssv1776766,nssv1776784,nssv1776772,nssv1776725,nssv1776754,nssv1776716,nssv1776776,nssv1776782,nssv1776757,nssv1776718,nssv1776734,nssv1778767,nssv1776750,nssv1778768,nssv1776735,nssv1778771,nssv1776751,nssv1776719,nssv1776746,nssv1778760,nssv1776741,nssv1776786,nssv1778758,nssv1778761,nssv1776748,nssv1778759,nssv1776790,nssv1776779,nssv1776762,nssv1778769,nssv1776737,nssv1776717,nssv1776724,nssv1776722,nssv1776733,nssv1778762,nssv1776770,nssv1778763,nssv1776749,nssv1776721,nssv1776773,nssv1776723,nssv1776743,nssv1776720,nssv1776795,nssv1776787,nssv1776759,nssv1776797,nssv1776745,nssv1776767,nssv1776769,nssv1776731,nssv1776763,nssv1776736,nssv1776794,nssv1776774,nssv1776789,nssv1776739,nssv1776796,nssv1776755,nssv1776768,nssv1776771,nssv1776728,nssv1776777,nssv1776752,nssv1776753,nssv1776761,nssv1776792,nssv1776738,nssv1776760 M 97 10 0 LOC100129620 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv546885 1 99293130 99324396 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719662 M 17421 0 1 LOC100129620 nsv830782 1 99299273 99454277 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448128,nssv1448117 M 95 0 2 LOC100129620 nsv462605 1 99302746 99321934 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538725 M 1557 0 1 LOC100129620 HGDP00749 nsv546886 1 99302746 99321934 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173068 M 17421 0 1 LOC100129620 HGDP00749 nsv2077 1 99313072 99331276 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4429 M 9 1 0 LOC100129620 NA12878 esv3397812 1 99350184 99350184 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8639032 M 185 0 0 LOC100129620 nsv475707 1 99436334 99436334 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016284 M 9 1 0 "" NA12878 esv3328159 1 99444666 99444688 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674171,essv8674170,essv8674172 M 185 3 0 "" NA19238,NA19239,NA19240 esv3349031 1 99444680 99444699 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678443 M 185 1 0 "" NA19240 esv3310236 1 99444683 99444684 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841613,essv7842467,essv7843103 M 185 3 0 "" NA19238,NA19239,NA19240 esv3308838 1 99471027 99471028 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839025 M 185 1 0 "" NA19238 esv3368861 1 99471029 99471041 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674174,essv8674173 M 185 2 0 "" NA19239,NA19240 esv3409321 1 99471034 99471056 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900335,essv8900331,essv8900332,essv8900333,essv8900334 M 185 5 0 "" NA18508,NA18517,NA18519,NA19114,NA19225 esv3304691 1 99471042 99471043 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7742277,essv7750239,essv7759254,essv7747146,essv7741135,essv7747839,essv7745945 M 185 7 0 "" NA18508,NA18517,NA18519,NA19114,NA19225,NA19239,NA19240 nsv506950 1 99535647 99541647 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623280,nssv620664 M 4 0 0 LPPR4 NA15510,NA18994 nsv2088 1 99563886 99609093 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7408 M 9 0 1 "" NA12156 esv22216 1 99629113 99637922 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10416 M 40 0 1 "" NA18511 esv3351382 1 99630134 99630327 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808986 M 185 1 0 "" NA12878 esv27224 1 99663419 99664325 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12749 M 40 0 5 "" NA18505,NA18861,NA19114,NA19129,NA19225 nsv546887 1 99663559 99664221 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719663 M 17421 0 1 "" esv3304025 1 99667059 99667060 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7744246,essv7758602,essv7742352,essv7745937,essv7746847,essv7750216 M 185 6 0 "" NA18510,NA18519,NA18909,NA19138,NA19239,NA19240 esv3407561 1 99667061 99667117 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900338,essv8900340,essv8900339,essv8900341 M 185 4 0 "" NA18510,NA18519,NA18909,NA19138 esv3310284 1 99667120 99667121 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841744,essv7843016 M 185 2 0 "" NA19239,NA19240 esv3384377 1 99667122 99667141 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678444 M 185 1 0 "" NA19240 esv3356224 1 99667125 99667133 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674175,essv8674177 M 185 2 0 "" NA19239,NA19240 esv1946413 1 99684437 99685018 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4747980 M 1 0 1 "" NA18507 nsv998891 1 99717732 100081394 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479548 M 29084 0 1 FRRS1,PALMD esv987632 1 99737750 99737750 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3582037 M 3 1 0 "" HuRef esv1759523 1 99737751 99737751 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4264607 M 2 1 0 "" HuRef esv3334734 1 99744801 99744811 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863734 M 185 1 0 "" NA12005 esv1217706 1 99748662 99748726 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4288674 M 2 0 1 "" HuRef nsv2099 1 99753744 99770716 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4439 M 9 1 0 "" NA12878 nsv830793 1 99768413 99937227 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448150,nssv1448139,nssv1448185,nssv1448172,nssv1448161,nssv1448196 M 95 0 6 PALMD nsv2110 1 99800404 99845465 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7417 M 9 0 1 "" NA12156 nsv474541 1 99832536 99832536 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020018 M 9 1 0 "" NA18956 nsv509391 1 99904688 99946253 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623788 M 4 1 0 PALMD NA18994 nsv1002853 1 99920791 100162375 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465286 M 29084 1 0 AGL,FRRS1,PALMD esv2491678 1 99921201 99921309 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5289240 M 1 0 1 PALMD NA18507 nsv526047 1 99922610 100218634 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702283 M 2026 1 0 AGL,FRRS1,PALMD,SLC35A3 nsv946093 1 99934135 99939710 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776819,nssv1776891,nssv1776820,nssv1776869,nssv1776830,nssv1776882,nssv1776895,nssv1776840,nssv1776894,nssv1776881,nssv1776843,nssv1776907,nssv1776823,nssv1776868,nssv1776839,nssv1776909,nssv1776829,nssv1776861,nssv1776821,nssv1776859,nssv1776844,nssv1776872,nssv1776897,nssv1776887,nssv1776824,nssv1776884,nssv1776835,nssv1776850,nssv1776898,nssv1776870,nssv1776901,nssv1776841,nssv1776893,nssv1776856,nssv1776892,nssv1776858,nssv1776899,nssv1776880,nssv1776828,nssv1776873,nssv1776896,nssv1776864,nssv1776832,nssv1776911,nssv1776827,nssv1776874,nssv1776826,nssv1776879,nssv1776836,nssv1776885,nssv1776816,nssv1776905,nssv1776833,nssv1776860,nssv1776846,nssv1776855,nssv1776900,nssv1776851,nssv1776817,nssv1776838,nssv1776825,nssv1776848,nssv1776831,nssv1776863,nssv1776818,nssv1776890,nssv1776837,nssv1776854,nssv1776822,nssv1776842,nssv1776834,nssv1776886,nssv1776903,nssv1776845,nssv1776865,nssv1776878,nssv1776875,nssv1776867,nssv1776857,nssv1776904,nssv1776847,nssv1776889,nssv1776902,nssv1776866,nssv1776910,nssv1776888,nssv1776908,nssv1776862,nssv1776853,nssv1776871,nssv1776852,nssv1776849,nssv1776876,nssv1776883,nssv1776877,nssv1776906,nssv1776815 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv823642 1 99946290 99946846 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428034 M 31 0 1 "" AK10 esv24594 1 99967478 99977051 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11501,esv14576 M 40 0 6 FRRS1 NA18505,NA18511,NA18858,NA18861,NA18916,NA19240 esv3383247 1 100000624 100000640 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863735 M 185 1 0 FRRS1 NA12005 nsv1003259 1 100007442 100216315 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699604 M 29084 0 1 AGL,SLC35A3 nsv525046 1 100041579 100048005 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701091 M 2026 0 1 "" nsv946094 1 100060736 100062981 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1776925,nssv1776967,nssv1776916,nssv1776960,nssv1776917,nssv1776961,nssv1776985,nssv1776958,nssv1776924,nssv1776975,nssv1776940,nssv1776968,nssv1776927,nssv1776938,nssv1776936,nssv1776912,nssv1776913,nssv1776950,nssv1776926,nssv1776956,nssv1776983,nssv1776947,nssv1776988,nssv1776946,nssv1776932,nssv1776953,nssv1776989,nssv1776978,nssv1776986,nssv1776977,nssv1776918,nssv1776937,nssv1776929,nssv1776976,nssv1776928,nssv1776955,nssv1776920,nssv1776949,nssv1776922,nssv1776965,nssv1776941,nssv1776980,nssv1776984,nssv1776939,nssv1776982,nssv1776966,nssv1776991,nssv1776935,nssv1776930,nssv1776957,nssv1776987,nssv1776970,nssv1776923,nssv1776962,nssv1776921,nssv1776981,nssv1776990,nssv1776971,nssv1776933,nssv1776959,nssv1776914,nssv1776948,nssv1776934,nssv1776963,nssv1776915,nssv1776973,nssv1776919,nssv1776942,nssv1776943,nssv1776979,nssv1776931,nssv1776951,nssv1776952,nssv1776954,nssv1776964,nssv1776945,nssv1776974,nssv1776972,nssv1776969,nssv1776944 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946095 1 100080345 100081309 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1777013,nssv1777967,nssv1776994,nssv1777981,nssv1777995,nssv1777977,nssv1776996,nssv1777992,nssv1776997,nssv1777990,nssv1777000,nssv1777960,nssv1777012,nssv1777954,nssv1777994,nssv1778007,nssv1777020,nssv1777949,nssv1778000,nssv1777022,nssv1777016,nssv1777989,nssv1777006,nssv1777975,nssv1777007,nssv1777962,nssv1776993,nssv1778006,nssv1777999,nssv1777959,nssv1776998,nssv1777956,nssv1777004,nssv1777983,nssv1777009,nssv1777984,nssv1777998,nssv1777015,nssv1778002,nssv1776992,nssv1777008,nssv1777972,nssv1777005,nssv1777950,nssv1777993,nssv1777951,nssv1777010,nssv1777018,nssv1777002,nssv1777961,nssv1777996,nssv1777969,nssv1777001,nssv1778005,nssv1777014,nssv1777948,nssv1777003,nssv1777973,nssv1777021,nssv1777970,nssv1777023,nssv1777966,nssv1778001,nssv1777991,nssv1777997,nssv1777963,nssv1776999,nssv1777985,nssv1776995,nssv1777965,nssv1777011,nssv1777968,nssv1777958,nssv1777982,nssv1778004,nssv1778008,nssv1777978,nssv1777971,nssv1778012,nssv1777980,nssv1777017,nssv1777957,nssv1777974,nssv1778011,nssv1777953,nssv1777976,nssv1777955,nssv1777019,nssv1777986,nssv1778003,nssv1778010,nssv1777979,nssv1777952,nssv1777987,nssv1777964,nssv1777988,nssv1778009 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv523220 1 100111366 100116982 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698942 M 2026 0 1 AGL nsv947436 1 100120955 100127960 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764354 M 97 1 0 AGL HGDP00998 esv3304048 1 100128436 100128437 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760513,essv7756882,essv7757677,essv7752377 M 185 4 0 AGL NA11831,NA12717,NA12751,NA12761 esv3357668 1 100128470 100128556 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900344,essv8900343,essv8900342,essv8900345 M 185 4 0 AGL NA11831,NA12717,NA12751,NA12761 esv2758952 1 100132243 100270930 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757742 M 270 0 1 AGL,SLC35A3 NA12864 nsv428146 1 100132243 100270930 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450620 M 62 1 0 AGL,SLC35A3 NA19113 esv2655277 1 100137023 100138493 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5201134 M 1 0 1 AGL NA18507 nsv546888 1 100192455 100323033 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719664 M 17421 0 1 HIAT1,SASS6,SLC35A3 nsv10406 1 100213720 100216815 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16431,nssv17759,nssv15440 M 31 3 0 SLC35A3 NA18853,NA18860,NA19173 esv2567165 1 100240298 100241721 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5304106 M 1 0 1 SLC35A3 NA18507 nsv830804 1 100274921 100448625 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448207 M 95 1 0 DBT,HIAT1,LRRC39,SASS6,TRMT13 esv3305976 1 100324232 100324233 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7806408,essv7832975,essv7789521,essv7828145,essv7812371,essv7777680,essv7819417,essv7825341,essv7802352,essv7805622 M 185 10 0 SASS6 NA10847,NA12045,NA18501,NA18504,NA18517,NA19099,NA19114,NA19147,NA19238,NA19257 esv3310050 1 100324234 100324235 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838149,essv7838321 M 185 2 0 SASS6 NA12878,NA12891 esv3414188 1 100324239 100324303 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673707 M 185 1 0 SASS6 NA19238 esv1008570 1 100345680 100346175 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586791 M 3 1 0 SASS6 HuRef nsv2121 1 100353207 100387791 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1276 M 9 1 0 LRRC39,SASS6,TRMT13 NA19240 esv275107 1 100374353 100377901 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586079 M 1250 0 1 TRMT13 nsv524345 1 100505443 100517386 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700252 M 2026 0 1 RTCA nsv522987 1 100505443 100567795 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698657 M 2026 1 0 MIR553,RTCA nsv2132 1 100545489 100579424 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7423 M 9 1 0 "" NA12156 nsv525429 1 100553949 100554125 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701555 M 2026 1 0 "" nsv830815 1 100557415 100710906 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448229,nssv1448218 M 95 2 0 CDC14A nsv473052 1 100600630 100600630 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018246 M 9 1 0 CDC14A NA19129 nsv830826 1 100622915 100838475 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448240 M 95 1 0 CDC14A,GPR88 esv3373317 1 100711183 100711202 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678322 M 185 1 0 CDC14A NA19240 nsv546889 1 100742934 100963454 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719665 M 17421 1 0 CDC14A,GPR88,LOC100128787,VCAM1 nsv823653 1 100776837 100777868 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431825 M 31 0 1 GPR88 AK20 esv22185 1 100777276 100778321 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16028 M 40 0 1 GPR88 NA18861 nsv473555 1 100789404 100789404 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013637 M 9 1 0 "" NA19129 nsv830837 1 100794896 100954194 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448251 M 95 0 1 LOC100128787 nsv946096 1 100824112 100828137 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778033,nssv1778106,nssv1778029,nssv1778074,nssv1778024,nssv1778063,nssv1778016,nssv1778085,nssv1778032,nssv1778053,nssv1778095,nssv1778061,nssv1778021,nssv1778078,nssv1778093,nssv1778050,nssv1778099,nssv1778087,nssv1778014,nssv1778059,nssv1778044,nssv1778060,nssv1778092,nssv1778101,nssv1778020,nssv1778057,nssv1778019,nssv1778079,nssv1778037,nssv1778036,nssv1778022,nssv1778013,nssv1778035,nssv1778082,nssv1778017,nssv1778064,nssv1778026,nssv1778089,nssv1778096,nssv1778103,nssv1778025,nssv1778105,nssv1778091,nssv1778067,nssv1778094,nssv1778109,nssv1778030,nssv1778108,nssv1778031,nssv1778062,nssv1778018,nssv1778080,nssv1778028,nssv1778083,nssv1778023,nssv1778084,nssv1778027,nssv1778076,nssv1778098,nssv1778107,nssv1778097,nssv1778039,nssv1778034,nssv1778049,nssv1778041,nssv1778051,nssv1778042,nssv1778071,nssv1778015,nssv1778104,nssv1778090,nssv1778056,nssv1778088,nssv1778069,nssv1778066,nssv1778043,nssv1778100,nssv1778072,nssv1778038,nssv1778065,nssv1778075,nssv1778046,nssv1778047,nssv1778045,nssv1778102,nssv1778058,nssv1778070,nssv1778068,nssv1778055,nssv1778054,nssv1778040,nssv1778048,nssv1778086,nssv1778081,nssv1778052,nssv1778073,nssv1778077 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946097 1 100884590 100894416 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778123,nssv1778492,nssv1778116,nssv1778483,nssv1778501,nssv1778471,nssv1778498,nssv1778511,nssv1778126,nssv1778140,nssv1778129,nssv1778466,nssv1778113,nssv1778158,nssv1778118,nssv1778509,nssv1778132,nssv1778486,nssv1778112,nssv1778482,nssv1778131,nssv1778147,nssv1778122,nssv1778513,nssv1778134,nssv1778485,nssv1778499,nssv1778484,nssv1778121,nssv1778493,nssv1778139,nssv1778476,nssv1778141,nssv1778490,nssv1778500,nssv1778149,nssv1778496,nssv1778473,nssv1778114,nssv1778110,nssv1778119,nssv1778479,nssv1778130,nssv1778510,nssv1778503,nssv1778157,nssv1778127,nssv1778156,nssv1778120,nssv1778478,nssv1778115,nssv1778154,nssv1778128,nssv1778474,nssv1778124,nssv1778507,nssv1778497,nssv1778150,nssv1778495,nssv1778480,nssv1778125,nssv1778145,nssv1778502,nssv1778146,nssv1778117,nssv1778512,nssv1778111,nssv1778135,nssv1778138,nssv1778472,nssv1778494,nssv1778505,nssv1778506,nssv1778470,nssv1778467,nssv1778148,nssv1778143,nssv1778489,nssv1778481,nssv1778136,nssv1778137,nssv1778469,nssv1778477,nssv1778488,nssv1778508,nssv1778144,nssv1778475,nssv1778153,nssv1778142,nssv1778504,nssv1778155,nssv1778151,nssv1778491,nssv1778152,nssv1778133,nssv1778468,nssv1778487 M 97 10 0 LOC100128787 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv27022 1 100892522 100894995 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20945 M 40 0 5 "" NA18502,NA18508,NA18858,NA19114,NA19190 esv3305384 1 100939955 100939956 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759065,essv7744742,essv7746407 M 185 3 0 "" NA18508,NA18858,NA19190 esv3375861 1 100939967 100940020 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900471,essv8900468,essv8900469 M 185 3 0 "" NA18508,NA18858,NA19190 nsv522064 1 100953930 101312454 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694834 M 2026 1 0 DPH5,EXTL2,SLC30A7,VCAM1 nsv546890 1 100974810 100989194 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719666 M 17421 0 1 VCAM1 nsv522441 1 101044990 101049132 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705799 M 2026 0 1 "" esv2438965 1 101057070 101057767 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5271140 M 1 1 0 "" NA18507 esv3443922 1 101096108 101096120 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863736 M 185 1 0 "" NA12005 esv5152 1 101161072 101161531 CNV loss Wang_et_al_2008 18987735 Sequencing essv27593 M 1 0 1 SLC30A7 YH nsv946098 1 101176559 101188538 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778534,nssv1779206,nssv1778545,nssv1779196,nssv1778522,nssv1778555,nssv1778528,nssv1778540,nssv1778535,nssv1779193,nssv1779211,nssv1779187,nssv1778543,nssv1778558,nssv1779212,nssv1778563,nssv1778525,nssv1778514,nssv1778526,nssv1779219,nssv1779215,nssv1778561,nssv1778538,nssv1779181,nssv1779210,nssv1779188,nssv1778517,nssv1778562,nssv1778529,nssv1779183,nssv1778523,nssv1779186,nssv1779207,nssv1778551,nssv1778516,nssv1779202,nssv1778531,nssv1778560,nssv1778527,nssv1779203,nssv1778533,nssv1778549,nssv1778524,nssv1778550,nssv1778542,nssv1778539,nssv1778515,nssv1778547,nssv1778530,nssv1778554,nssv1778532,nssv1778548,nssv1779216,nssv1779197,nssv1778519,nssv1779195,nssv1778518,nssv1779218,nssv1778536,nssv1778557,nssv1778520,nssv1779190,nssv1779208,nssv1779180,nssv1778521,nssv1779220,nssv1779214,nssv1779199,nssv1779209,nssv1778559,nssv1779213,nssv1779189,nssv1778546,nssv1778552,nssv1779223,nssv1778553,nssv1779224,nssv1779204,nssv1779201,nssv1779185,nssv1779191,nssv1779226,nssv1779205,nssv1779192,nssv1779222,nssv1778537,nssv1779217,nssv1778556,nssv1779182,nssv1779198,nssv1779194,nssv1779184,nssv1779200,nssv1779225,nssv1778541,nssv1779221,nssv1778544 M 97 10 0 SLC30A7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1088978 1 101202426 101202426 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4024296 M 2 1 0 SLC30A7 HuRef nsv998086 1 101252288 101416786 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465849 M 29084 1 0 DPH5 nsv508025 1 101330415 101336415 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624218 M 4 0 0 "" NA18994 dgv11n21 1 101411587 101412236 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv522730,nsv528379 M 2026 0 2 "" nsv546891 1 101481340 101505693 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719667 M 17421 0 1 "" esv1305579 1 101491346 101491420 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3681512 M 2 0 1 "" HuRef esv1190659 1 101491721 101491721 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4070314 M 2 1 0 "" HuRef esv1594659 1 101491941 101491995 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3916978 M 2 0 1 "" HuRef nsv946099 1 101494490 101495680 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779255,nssv1779261,nssv1779228,nssv1779293,nssv1779240,nssv1779269,nssv1779247,nssv1779280,nssv1779243,nssv1779285,nssv1779311,nssv1779321,nssv1779308,nssv1779296,nssv1779235,nssv1779317,nssv1779229,nssv1779268,nssv1779234,nssv1779302,nssv1779305,nssv1779292,nssv1779309,nssv1779276,nssv1779251,nssv1779286,nssv1779246,nssv1779253,nssv1779248,nssv1779267,nssv1779307,nssv1779316,nssv1779241,nssv1779303,nssv1779256,nssv1779320,nssv1779230,nssv1779288,nssv1779310,nssv1779227,nssv1779239,nssv1779284,nssv1779242,nssv1779257,nssv1779238,nssv1779287,nssv1779244,nssv1779291,nssv1779237,nssv1779271,nssv1779312,nssv1779263,nssv1779245,nssv1779281,nssv1779306,nssv1779275,nssv1779258,nssv1779265,nssv1779236,nssv1779295,nssv1779231,nssv1779252,nssv1779249,nssv1779301,nssv1779313,nssv1779298,nssv1779232,nssv1779272,nssv1779304,nssv1779297,nssv1779233,nssv1779259,nssv1779318,nssv1779278,nssv1779289,nssv1779279,nssv1779254,nssv1779314,nssv1779270,nssv1779262,nssv1779300,nssv1779299,nssv1779323,nssv1779260,nssv1779315,nssv1779277,nssv1779283,nssv1779319,nssv1779264,nssv1779266,nssv1779294,nssv1779322,nssv1779273,nssv1779282,nssv1779274,nssv1779250,nssv1779290 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2202662 1 101496545 101496992 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4825413 M 1 0 1 "" NA18507 esv990332 1 101496718 101496794 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583925 M 3 0 1 "" HuRef nsv946100 1 101502990 101517054 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779339,nssv1779391,nssv1779346,nssv1779395,nssv1779330,nssv1779363,nssv1779325,nssv1779347,nssv1779337,nssv1779392,nssv1779404,nssv1779394,nssv1779340,nssv1779378,nssv1779403,nssv1779387,nssv1779405,nssv1779380,nssv1779332,nssv1779383,nssv1779406,nssv1779419,nssv1779408,nssv1779393,nssv1779401,nssv1779377,nssv1779343,nssv1779396,nssv1779331,nssv1779373,nssv1779348,nssv1779412,nssv1779334,nssv1779384,nssv1779333,nssv1779390,nssv1779409,nssv1779413,nssv1779352,nssv1779398,nssv1779338,nssv1779366,nssv1779410,nssv1779400,nssv1779345,nssv1779420,nssv1779407,nssv1779415,nssv1779326,nssv1779357,nssv1779327,nssv1779324,nssv1779355,nssv1779368,nssv1779341,nssv1779351,nssv1779402,nssv1779379,nssv1779342,nssv1779371,nssv1779335,nssv1779360,nssv1779353,nssv1779382,nssv1779344,nssv1779364,nssv1779328,nssv1779397,nssv1779329,nssv1779385,nssv1779336,nssv1779354,nssv1779358,nssv1779386,nssv1779388,nssv1779381,nssv1779362,nssv1779372,nssv1779370,nssv1779369,nssv1779365,nssv1779416,nssv1779367,nssv1779350,nssv1779375,nssv1779418,nssv1779359,nssv1779361,nssv1779417,nssv1779349,nssv1779414,nssv1779389,nssv1779399,nssv1779376,nssv1779356,nssv1779411,nssv1779374 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv24906 1 101542543 101543601 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19519 M 40 0 1 "" NA11995 esv3364876 1 101542626 101542662 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673718,essv8673717 M 185 2 0 "" NA12891,NA12892 esv3310204 1 101542633 101542634 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837540,essv7837716,essv7838618 M 185 3 0 "" NA12892,NA19238,NA19240 esv3306582 1 101542648 101542649 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7747183,essv7747509,essv7760631,essv7752560,essv7751123,essv7753859,essv7763034,essv7760985,essv7752101,essv7751791,essv7749750,essv7752241,essv7746914,essv7751323,essv7748416,essv7742458,essv7748264,essv7746256,essv7756855,essv7741146,essv7760884 M 185 21 0 "" NA06986,NA07037,NA11881,NA11920,NA11995,NA12044,NA12751,NA12891,NA12892,NA18517,NA18520,NA18526,NA18570,NA18573,NA18907,NA18944,NA18947,NA18965,NA19093,NA19114,NA19138 esv3388976 1 101542649 101542657 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900488,essv8900475,essv8900477,essv8900485,essv8900478,essv8900480,essv8900486,essv8900473,essv8900491,essv8900487,essv8900474,essv8900490,essv8900479,essv8900476,essv8900472,essv8900484,essv8900482,essv8900489,essv8900483 M 185 19 0 "" NA06986,NA07037,NA11881,NA11920,NA11995,NA12044,NA12751,NA18517,NA18520,NA18526,NA18570,NA18573,NA18907,NA18944,NA18947,NA18965,NA19093,NA19114,NA19138 nsv997541 1 101543302 101562150 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3699605 M 29084 1 0 "" nsv546892 1 101550824 101615037 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719668 M 17421 0 1 "" esv274998 1 101570665 101574777 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586018 M 1250 0 1 "" esv3412597 1 101587176 101587195 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678324 M 185 1 0 "" NA12878 nsv823664 1 101620827 101631012 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1429568 M 31 0 1 "" AK14 esv24897 1 101638296 101639090 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19401 M 40 0 2 "" NA11894,NA18858 nsv526432 1 101645453 101655463 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702735 M 2026 0 1 "" nsv472562 1 101661174 101661174 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018971 M 9 1 0 "" NA18555 nsv830848 1 101702891 101886808 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448262 M 95 1 0 "" nsv546893 1 101745573 101777616 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719669 M 17421 0 1 "" esv2581518 1 101752285 101759809 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5242892 M 1 0 1 "" NA18507 nsv516967 1 101756396 101757520 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv686305,nssv653526,nssv673660,nssv675917 M 2026 0 4 "" nsv546894 1 101766795 101782690 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719670 M 17421 0 1 "" nsv546895 1 101777242 101789688 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719671 M 17421 0 1 "" nsv546896 1 101777242 101797578 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719672,nssv719674,nssv719673,nssv719675 M 17421 0 4 "" nsv546897 1 101777242 101813107 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719676 M 17421 0 1 "" nsv10417 1 101780192 101787833 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv15430 M 31 0 1 "" NA12802 nsv436925 1 101780202 101789231 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466806 M 60 0 1 "" NA12802 nsv520951 1 101781773 101789688 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697705 M 2026 0 1 "" nsv159743 1 101790862 101790948 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178321 M 24 "" esv1686031 1 101791225 101791225 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3901849 M 2 1 0 "" HuRef esv1735476 1 101791471 101791471 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4022897 M 2 1 0 "" HuRef esv1147927 1 101791509 101791579 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4089302 M 2 0 1 "" HuRef nsv1013847 1 101801911 101825167 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477056 M 29084 1 0 "" esv3387987 1 101851047 101851088 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863737 M 185 1 0 "" NA12005 nsv527681 1 101873811 101888098 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704157 M 2026 0 1 "" nsv472775 1 101886374 101886374 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016079 M 9 1 0 "" NA18555 esv1059741 1 101896099 101896180 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3649349 M 2 0 1 "" HuRef nsv522921 1 101942883 102648980 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698582 M 2026 0 1 DNAJA1P5,MIR548AI,OLFM3 esv3436023 1 102012736 102012756 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900501,essv8900498,essv8900500,essv8900496,essv8900494,essv8900493,essv8900497,essv8900499,essv8900495 M 185 9 0 "" NA18517,NA18519,NA18907,NA18912,NA19093,NA19102,NA19116,NA19129,NA19147 esv3305788 1 102012738 102012739 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758823,essv7742341,essv7749829,essv7741054,essv7745583,essv7755804,essv7760424,essv7756431,essv7763235 M 185 9 0 "" NA18517,NA18519,NA18907,NA18912,NA19093,NA19102,NA19116,NA19129,NA19147 nsv946101 1 102023123 102025481 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779426,nssv1779451,nssv1780425,nssv1779487,nssv1779422,nssv1779486,nssv1779441,nssv1780436,nssv1779434,nssv1779447,nssv1779437,nssv1780421,nssv1780424,nssv1780412,nssv1779429,nssv1779479,nssv1780431,nssv1780437,nssv1779452,nssv1779481,nssv1779430,nssv1780418,nssv1780429,nssv1780435,nssv1780426,nssv1779468,nssv1779445,nssv1779458,nssv1779435,nssv1779456,nssv1779428,nssv1779470,nssv1780422,nssv1779460,nssv1779442,nssv1780441,nssv1780428,nssv1779475,nssv1779432,nssv1779455,nssv1779436,nssv1779484,nssv1780430,nssv1779457,nssv1779438,nssv1780419,nssv1780423,nssv1779485,nssv1779427,nssv1780433,nssv1779433,nssv1779474,nssv1779424,nssv1779454,nssv1779443,nssv1780440,nssv1779450,nssv1780417,nssv1779431,nssv1779478,nssv1779449,nssv1779467,nssv1779439,nssv1780438,nssv1780427,nssv1779483,nssv1779425,nssv1779463,nssv1779423,nssv1779461,nssv1779440,nssv1779421,nssv1779472,nssv1779469,nssv1779482,nssv1779476,nssv1779444,nssv1780420,nssv1780439,nssv1780432,nssv1779465,nssv1780416,nssv1780413,nssv1779453,nssv1780434,nssv1779466,nssv1780414,nssv1779462,nssv1779446,nssv1779473,nssv1780415,nssv1779448,nssv1779459,nssv1779471,nssv1779477,nssv1779480,nssv1779464 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2143 1 102026767 102061395 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3014 M 9 1 0 OLFM3 NA18555 dgv379n54 1 102046864 102076740 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546898,nsv546899 M 17421 0 2 OLFM3 nsv522156 1 102082237 102194302 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694929 M 2026 1 0 DNAJA1P5,MIR548AI,OLFM3 nsv441701 1 102096209 102098748 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656693,nssv1656691,nssv1656692,nssv1656694 M 270 0 4 OLFM3 NA19128,NA19201,NA19202,NA19222 esv2764222 1 102096209 102099731 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005612,essv7005610,essv7005614,essv7005615,essv7005613,essv7005609 M 1109 0 6 OLFM3 RW_0007,RW_0059,RW_0193,RW_0255,RW_0553,RW_0570 nsv946102 1 102118128 102120673 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780521,nssv1780490,nssv1780449,nssv1780442,nssv1779084,nssv1780477,nssv1779080,nssv1780480,nssv1780461,nssv1780494,nssv1780462,nssv1780518,nssv1779081,nssv1779094,nssv1779085,nssv1780497,nssv1780447,nssv1780479,nssv1780443,nssv1780482,nssv1780466,nssv1780512,nssv1780448,nssv1780491,nssv1780450,nssv1780488,nssv1780451,nssv1779093,nssv1780445,nssv1780469,nssv1779083,nssv1779091,nssv1779082,nssv1780484,nssv1780463,nssv1780475,nssv1780464,nssv1780514,nssv1780471,nssv1780485,nssv1780473,nssv1780510,nssv1780520,nssv1780495,nssv1780470,nssv1780513,nssv1780455,nssv1780486,nssv1780522,nssv1780515,nssv1780458,nssv1780506,nssv1780460,nssv1779088,nssv1780454,nssv1779090,nssv1780446,nssv1780468,nssv1780452,nssv1780487,nssv1780519,nssv1780499,nssv1780444,nssv1780501,nssv1780459,nssv1780489,nssv1780457,nssv1780505,nssv1780456,nssv1780502,nssv1780453,nssv1780516,nssv1780496,nssv1780511,nssv1779087,nssv1780472,nssv1779095,nssv1780508,nssv1780517,nssv1780478,nssv1780509,nssv1780498,nssv1779092,nssv1780467,nssv1780474,nssv1780504,nssv1780500,nssv1780483,nssv1780492,nssv1780493,nssv1780476,nssv1779089,nssv1780465,nssv1780507,nssv1780503,nssv1779086,nssv1780481 M 97 10 0 DNAJA1P5,MIR548AI,OLFM3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv209n100 1 102133198 102211020 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012856,nsv1004240 M 29084 0 2 MIR548AI,OLFM3 nsv520768 1 102138728 102207718 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv692106,nssv676040,nssv679574,nssv684634,nssv697559,nssv675139 M 2026 0 6 MIR548AI,OLFM3 esv2758953 1 102144927 102189681 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756852 M 270 0 2 MIR548AI,OLFM3 NA19193,NA19194 nsv546900 1 102148846 102246147 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719679 M 17421 0 1 MIR548AI,OLFM3 nsv1012053 1 102174324 102189304 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472934 M 29084 0 1 MIR548AI,OLFM3 esv2762160 1 102174336 102184466 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005616 M 1109 0 1 MIR548AI,OLFM3 RW_0230 nsv508026 1 102217311 102223311 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618499 M 4 0 0 MIR548AI,OLFM3 CHM esv2422183 1 102223324 102569407 CNV deletion Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161466 M 181 0 1 MIR548AI,OLFM3 ND04880 esv3358242 1 102267406 102267406 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8639048 M 185 0 0 MIR548AI esv1278429 1 102267425 102267425 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4122465 M 2 1 0 MIR548AI HuRef esv1525103 1 102285230 102285230 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4112486 M 2 1 0 MIR548AI HuRef esv3396218 1 102285230 102285230 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701354 M 185 1 0 MIR548AI NA12878 nsv2154 1 102332057 102352642 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9970 M 9 1 0 MIR548AI NA18507 nsv1007511 1 102336580 102541556 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475745 M 29084 0 1 MIR548AI esv1002403 1 102341007 102341657 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565179 M 3 1 0 MIR548AI HuRef esv3304022 1 102341496 102341497 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7765627,essv7764536,essv7764976,essv7769905,essv7763560 M 185 5 0 MIR548AI NA07346,NA07347,NA11840,NA12812,NA12815 esv3407290 1 102341501 102341520 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595857,essv9595846,essv9595868,essv9595879 M 185 4 0 MIR548AI NA07346,NA11840,NA12812,NA12815 esv1135096 1 102341511 102341511 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4233735 M 2 1 0 MIR548AI HuRef dgv12n21 1 102351895 102515063 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv527496,nsv528450 M 2026 0 2 MIR548AI nsv546901 1 102381165 102489598 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719680 M 17421 0 1 MIR548AI dgv210n100 1 102419138 102631434 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000003,nsv1006160,nsv1003711,nsv1001712,nsv1012765,nsv1013397,nsv1014058,nsv997714,nsv998908,nsv1007166,nsv1002440,nsv998426 M 29084 0 43 MIR548AI dgv13n21 1 102420526 102767806 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv527282,nsv527939 M 2026 2 0 MIR548AI dgv5e55 1 102428272 102622567 CNV loss Pinto_et_al_2007 17911159 SNP array esv2750795,esv2750796 M 771 0 7 MIR548AI BEC_705,SPC_178 esv2763582 1 102430232 102625438 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7032413 M 1109 0 1 MIR548AI SW_0216 dgv211n100 1 102432436 102589129 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997932,nsv1009117,nsv1008643,nsv1013803 M 29084 4 0 MIR548AI dgv380n54 1 102434268 102631434 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546903,nsv546902,nsv546909,nsv546906,nsv546908 M 17421 0 7 MIR548AI nsv521500 1 102439976 102567800 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698115 M 2026 1 0 MIR548AI dgv24n27 1 102439976 102600918 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv462683,nsv462661 M 1557 0 2 MIR548AI 1780862585_A,NINDS_145 dgv381n54 1 102439976 102600918 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546910,nsv546905,nsv546904 M 17421 0 3 MIR548AI 1780862585_A,NINDS_145 nsv462672 1 102442898 102599611 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538769 M 1557 1 0 MIR548AI 1782681378_A nsv546907 1 102442898 102599611 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173070 M 17421 1 0 MIR548AI 1782681378_A nsv474505 1 102455475 102455475 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014405 M 9 1 0 MIR548AI NA18956 nsv522781 1 102481105 102484513 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698424 M 2026 0 1 MIR548AI esv2762161 1 102490624 102534097 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005617 M 1109 0 1 MIR548AI RW_0655 nsv546911 1 102507539 102601263 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719689 M 17421 0 1 MIR548AI nsv823675 1 102564063 102567785 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431826 M 31 1 0 MIR548AI AK20 dgv382n54 1 102567005 102606683 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546912,nsv546913,nsv546914,nsv546915,nsv546916,nsv546917 M 17421 0 7 MIR548AI nsv830859 1 102577801 102760242 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448273 M 95 0 1 MIR548AI nsv524686 1 102589129 102589429 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700658 M 2026 0 1 "" nsv462694 1 102589129 102601263 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538791 M 1557 0 1 "" NINDS_99 dgv383n54 1 102589129 102601411 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546920,nsv546918,nsv546919 M 17421 0 3 "" NINDS_99 dgv6n17 1 102599611 102603213 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv436936,nsv437230,nsv436947,nsv437231 M 60 0 4 "" NA07048,NA10861,NA18506,NA19211 nsv437926 1 102600719 102601411 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv467853,nssv467819,nssv467830,nssv467841 M 269 0 4 "" NA07048,NA07055,NA10861,NA11995 dgv212n100 1 102644109 102699046 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004389,nsv1011601 M 29084 2 0 "" nsv946104 1 102646531 102649260 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779160,nssv1779796,nssv1779128,nssv1779102,nssv1779800,nssv1779124,nssv1779807,nssv1779098,nssv1779145,nssv1779127,nssv1779152,nssv1779112,nssv1779154,nssv1779179,nssv1779169,nssv1779177,nssv1779131,nssv1779104,nssv1779142,nssv1779178,nssv1779165,nssv1779115,nssv1779139,nssv1779117,nssv1779133,nssv1779110,nssv1779132,nssv1779120,nssv1779134,nssv1779176,nssv1779123,nssv1779099,nssv1779804,nssv1779107,nssv1779096,nssv1779101,nssv1779135,nssv1779103,nssv1779157,nssv1779105,nssv1779138,nssv1779111,nssv1779149,nssv1779797,nssv1779130,nssv1779113,nssv1779156,nssv1779125,nssv1779137,nssv1779118,nssv1779168,nssv1779114,nssv1779153,nssv1779798,nssv1779172,nssv1779116,nssv1779166,nssv1779106,nssv1779170,nssv1779109,nssv1779147,nssv1779097,nssv1779136,nssv1779174,nssv1779121,nssv1779100,nssv1779808,nssv1779175,nssv1779167,nssv1779108,nssv1779805,nssv1779173,nssv1779150,nssv1779122,nssv1779158,nssv1779155,nssv1779146,nssv1779171,nssv1779806,nssv1779141,nssv1779140,nssv1779803,nssv1779119,nssv1779161,nssv1779143,nssv1779162,nssv1779151,nssv1779148,nssv1779801,nssv1779164,nssv1779159,nssv1779163,nssv1779129,nssv1779799,nssv1779144,nssv1779802,nssv1779126 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3397317 1 102693109 102693128 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678325 M 185 1 0 "" NA19240 esv3357468 1 102693118 102693130 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900508,essv8900521,essv8900524,essv8900505,essv8900517,essv8900528,essv8900532,essv8900507,essv8900533,essv8900523,essv8900519,essv8900531,essv8900530,essv8900522,essv8900506,essv8900502,essv8900529,essv8900527,essv8900509,essv8900511,essv8900518,essv8900504,essv8900526,essv8900535,essv8900516,essv8900534,essv8900512,essv8900515,essv8900513,essv8900520,essv8900510 M 185 31 0 "" NA10851,NA11894,NA11919,NA12750,NA12776,NA18498,NA18499,NA18501,NA18504,NA18505,NA18517,NA18520,NA18550,NA18570,NA18572,NA18579,NA18853,NA18856,NA18861,NA18870,NA18907,NA18912,NA18916,NA18973,NA19099,NA19102,NA19108,NA19129,NA19138,NA19147,NA19172 esv3438692 1 102693122 102693133 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673720,essv8673719,essv8673723,essv8673722 M 185 4 0 "" NA12891,NA19238,NA19239,NA19240 esv24050 1 102756236 102757357 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20246 M 40 0 5 "" NA18511,NA18861,NA18907,NA18916,NA19129 dgv384n54 1 102756238 102757295 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546921,nsv546922 M 17421 0 2 "" nsv830871 1 102800865 102975765 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448284 M 95 0 1 "" esv2588514 1 102819164 102820885 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5332575 M 1 0 1 "" NA18507 esv9181 1 102820008 102820899 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31622 M 1 0 0 "" esv2302750 1 102820082 102820805 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4975056 M 1 0 1 "" NA18507 esv4005 1 102820242 102820801 CNV loss Wang_et_al_2008 18987735 Sequencing essv26446 M 1 0 1 "" YH esv1010447 1 102820269 102820598 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566102 M 3 0 1 "" HuRef esv1182751 1 102820280 102820610 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4240462 M 2 0 1 "" HuRef nsv160443 1 102820281 102820610 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179021 M 24 "" esv3306443 1 102827027 102827028 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7742977,essv7759226,essv7740720,essv7756851,essv7750951,essv7748410 M 185 6 0 "" NA11919,NA12750,NA12751,NA12776,NA12891,NA18508 esv3328327 1 102827038 102827096 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900538,essv8900537,essv8900540,essv8900539,essv8900541 M 185 5 0 "" NA11919,NA12750,NA12751,NA12776,NA18508 esv3308334 1 102827070 102827071 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838808 M 185 1 0 "" NA19238 esv3325857 1 102827070 102827120 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673724 M 185 1 0 "" NA12891 nsv511707 1 102868161 102869757 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626348 M 1 0 1 "" 1 esv2568259 1 102868216 102869752 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5320969 M 1 0 1 "" NA18507 esv7494 1 102868393 102869252 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29935 M 1 0 0 "" esv2117977 1 102868463 102869175 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4536680 M 1 0 1 "" NA18507 esv5235 1 102868626 102869106 CNV loss Wang_et_al_2008 18987735 Sequencing essv27676 M 1 0 1 "" YH nsv159133 1 102868654 102868972 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177711 M 24 "" esv989579 1 102868663 102868981 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578553 M 3 0 1 "" HuRef esv1119125 1 102868668 102868987 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4177954 M 2 0 1 "" HuRef esv2003406 1 102883426 102883819 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4610152 M 1 0 1 "" NA18507 esv998667 1 102883577 102883643 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578567 M 3 0 1 "" HuRef esv1707446 1 102883646 102883713 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4167916 M 2 0 1 "" HuRef nsv158944 1 102883647 102883713 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177522 M 24 "" nsv519967 1 102896391 102906497 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694357 M 2026 0 1 "" nsv546923 1 102896391 103040347 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719701 M 17421 0 1 "" nsv1011070 1 102906749 102931663 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471082 M 29084 1 0 "" esv3893845 1 102938728 102975695 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780001,essv25779932 M 3017 0 2 "" esv3421995 1 102944989 102944998 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863738 M 185 1 0 "" NA12005 nsv462716 1 102949180 103032312 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538812 M 1557 0 1 "" HGDP01347 dgv385n54 1 102949180 103040347 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546925,nsv546927,nsv546924,nsv546926 M 17421 0 4 "" HGDP01347 nsv830882 1 102965271 103128390 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448296 M 95 0 1 COL11A1 nsv2165 1 103041055 103072296 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2237 M 9 1 0 "" NA18555 nsv522922 1 103077609 103537228 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698583 M 2026 0 1 COL11A1 nsv471952 1 103079807 103079807 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017780 M 9 1 0 "" NA18555 dgv386n54 1 103103937 103144240 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546928,nsv546929 M 17421 0 2 COL11A1 dgv387n54 1 103114980 103227805 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546933,nsv546930 M 17421 0 2 COL11A1 nsv462739 1 103126726 103174772 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538834 M 1557 0 1 COL11A1 NINDS_241 nsv546931 1 103126726 103174772 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173074 M 17421 0 1 COL11A1 NINDS_241 nsv462750 1 103128353 103152716 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538840 M 1557 0 1 COL11A1 HGDP01337 nsv546932 1 103128353 103152716 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173075 M 17421 0 1 COL11A1 HGDP01337 esv24564 1 103175673 103176357 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17322 M 40 1 0 COL11A1 NA18511 nsv546934 1 103176972 103222784 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719709 M 17421 0 1 COL11A1 esv2323749 1 103187133 103187838 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4809519 M 1 0 1 COL11A1 NA18507 nsv476094 1 103193520 103193520 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011924 M 9 1 0 COL11A1 NA12878 dgv388n54 1 103211383 103272484 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546936,nsv546935 M 17421 0 2 COL11A1 1780862310_A nsv462772 1 103211383 103272484 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538860 M 1557 0 1 COL11A1 1780862310_A dgv25n27 1 103211383 103321085 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv462783,nsv462794 M 1557 0 2 COL11A1 HGDP00580,NINDS_160 dgv389n54 1 103211383 103321085 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546938,nsv546937 M 17421 0 2 COL11A1 HGDP00580,NINDS_160 nsv830893 1 103231086 103408167 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448318,nssv1448307 M 95 0 2 COL11A1 nsv506951 1 103270799 103276799 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619247,nssv617536,nssv623281,nssv620665 M 4 0 0 COL11A1 CHM,NA10860,NA15510,NA18994 esv3336359 1 103285352 103287250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691704 M 185 1 0 COL11A1 NA19238 nsv508027 1 103373620 103379620 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618500 M 4 0 0 "" CHM nsv526337 1 103409195 103476854 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702628 M 2026 0 1 "" nsv159319 1 103418204 103427873 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177897 M 24 "" esv997377 1 103428880 103429739 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565363 M 3 1 0 "" HuRef esv3305344 1 103469063 103469064 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758335,essv7749825,essv7760193,essv7750399,essv7742351,essv7758456,essv7763350,essv7761820,essv7746118 M 185 9 0 "" NA18501,NA18519,NA18522,NA18907,NA18909,NA19093,NA19238,NA19240,NA19257 esv3360314 1 103469067 103469103 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900548,essv8900543,essv8900544,essv8900545,essv8900542,essv8900546,essv8900549 M 185 7 0 "" NA18501,NA18519,NA18522,NA18907,NA18909,NA19093,NA19257 esv3308341 1 103469076 103469077 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838301,essv7837744 M 185 2 0 "" NA12891,NA12892 esv3430610 1 103469079 103469097 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673725,essv8673726 M 185 2 0 "" NA19238,NA19240 nsv506952 1 103469280 103475280 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617537 M 4 0 0 "" CHM esv3411146 1 103491332 103491351 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595891 M 185 1 0 "" NA12814 esv3306069 1 103491345 103491346 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7819413,essv7780593,essv7827204,essv7813570,essv7799091,essv7820338,essv7794059,essv7809985,essv7791183,essv7833620,essv7823975 M 185 11 0 "" NA10847,NA11831,NA12003,NA12044,NA12750,NA12751,NA12814,NA12872,NA18547,NA18579,NA18582 esv3405113 1 103491354 103491372 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900551,essv8900552,essv8900560,essv8900557,essv8900554,essv8900556,essv8900555,essv8900550,essv8900553 M 185 9 0 "" NA10847,NA11831,NA12003,NA12044,NA12750,NA12751,NA18547,NA18579,NA18582 nsv480753 1 103518368 103518368 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011769 M 9 0 0 "" nsv160700 1 103519977 103523370 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179278 M 24 "" nsv480843 1 103523037 103523037 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014630 M 9 0 0 "" nsv479458 1 103528043 103528043 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018489 M 9 0 0 "" nsv477120 1 103529068 103529068 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015894 M 9 1 0 "" NA18517 nsv477116 1 103529090 103529090 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016598 M 9 1 0 "" NA18517 nsv480886 1 103533604 103533604 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015537 M 9 0 0 "" nsv481424 1 103534909 103534909 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010852 M 9 0 0 "" nsv481468 1 103535150 103535150 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015144 M 9 0 0 "" nsv479757 1 103535934 103535934 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017628 M 9 0 0 "" nsv480252 1 103537190 103537190 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019018 M 9 0 0 "" nsv479853 1 103537953 103537953 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012184 M 9 0 0 "" nsv474200 1 103538657 103538657 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014494 M 9 1 0 "" NA18507 nsv479821 1 103542975 103542975 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011170 M 9 0 0 "" nsv480365 1 103545245 103545245 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015186 M 9 0 0 "" nsv481382 1 103545682 103545682 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016742 M 9 0 0 "" nsv480300 1 103545686 103545686 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016133 M 9 0 0 "" nsv478388 1 103549565 103549565 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012666 M 9 1 0 "" NA18507 nsv475362 1 103551310 103551310 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015691 M 9 1 0 "" NA19240 dgv14n21 1 103689343 103930296 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv527283,nsv527940 M 2026 2 0 ACTG1P4,AMY2B,LOC101928436,RNPC3 nsv830904 1 103708219 103908708 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448329 M 95 0 1 AMY2B,LOC101928436,RNPC3 esv2758954 1 103762947 104253525 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757743 M 270 143 32 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B,LOC101928436,RNPC3 NA06985,NA06991,NA06994,NA07019,NA07029,NA07048,NA07055,NA07345,NA07357,NA10830,NA10831,NA10835,NA10838,NA10839,NA10846,NA10847,NA10855,NA10856,NA10857,NA10859,NA10860,NA11829,NA11830,NA11831,NA11881,NA11882,NA11993,NA11994,NA12005,NA12006,NA12043,NA12057,NA12145,NA12146,NA12155,NA12234,NA12236,NA12248,NA12249,NA12264,NA12707,NA12716,NA12717,NA12752,NA12753,NA12760,NA12761,NA12763,NA12801,NA12813,NA12864,NA12872,NA12873,NA12874,NA12892,NA18501,NA18502,NA18506,NA18507,NA18508,NA18516,NA18522,NA18523,NA18529,NA18532,NA18542,NA18545,NA18550,NA18552,NA18561,NA18562,NA18563,NA18566,NA18570,NA18571,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18622,NA18624,NA18635,NA18636,NA18637,NA18852,NA18854,NA18856,NA18857,NA18858,NA18859,NA18860,NA18862,NA18863,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18960,NA18964,NA18965,NA18968,NA18969,NA18971,NA18972,NA18974,NA18975,NA18976,NA18978,NA18980,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA19000,NA19003,NA19005,NA19007,NA19012,NA19093,NA19094,NA19098,NA19099,NA19101,NA19102,NA19103,NA19116,NA19119,NA19120,NA19127,NA19128,NA19129,NA19131,NA19137,NA19138,NA19140,NA19141,NA19142,NA19144,NA19152,NA19153,NA19154,NA19159,NA19173,NA19194,NA19200,NA19202,NA19203,NA19204,NA19206,NA19208,NA19211,NA19221,NA19223,NA19239 nsv428157 1 103762947 104253525 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450809,nssv450798,nssv450709,nssv450653,nssv450687,nssv450742,nssv450820,nssv450631,nssv450731,nssv450698,nssv450786,nssv450642,nssv450764,nssv450664,nssv450831,nssv450720,nssv450842,nssv450753,nssv450775,nssv450675 M 62 14 6 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B,LOC101928436,RNPC3 HGDP00460,HGDP00462,HGDP00467,HGDP00472,HGDP00473,HGDP00474,HGDP00476,HGDP00986,HGDP01087,HGDP01088,HGDP01089,HGDP01094,NA18498,NA18916,NA19096,NA19113,NA19147,NA19181,NA19225,NA19257 dgv213n100 1 103773619 104069733 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002902,nsv997808,nsv999292,nsv1000860 M 29084 4 0 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B,LOC101928436,RNPC3 esv3893879 1 103790366 103941535 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25790686 M 3017 1 0 ACTG1P4,AMY2B,LOC101928436,RNPC3 nsv526367 1 103792219 104131400 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702661 M 2026 1 0 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B,LOC101928436,RNPC3 nsv1012356 1 103793147 103979549 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473101 M 29084 1 0 ACTG1P4,AMY2A,AMY2B,LOC101928436,RNPC3 nsv830915 1 103797418 104094805 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1448340,nssv1448384,nssv1448418,nssv1448351,nssv1448395,nssv1448462,nssv1448373,nssv1448440,nssv1448451,nssv1448407,nssv1448429,nssv1448362 M 95 7 5 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B,LOC101928436,RNPC3 nsv523177 1 103815773 103930296 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698890 M 2026 1 0 ACTG1P4,AMY2B,LOC101928436,RNPC3 nsv546939 1 103829434 103841268 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719711 M 17421 0 1 LOC101928436,RNPC3 nsv546940 1 103838241 103841370 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719712 M 17421 0 1 LOC101928436,RNPC3 nsv1006715 1 103839453 103959820 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469461 M 29084 1 0 ACTG1P4,AMY2B,LOC101928436,RNPC3 dgv390n54 1 103839588 103841755 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546943,nsv546942,nsv546941 M 17421 0 5 LOC101928436,RNPC3 esv27438 1 103840477 103841810 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13780 M 40 1 0 LOC101928436,RNPC3 NA12044 nsv546944 1 103840662 103841370 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719718 M 17421 0 1 LOC101928436,RNPC3 dgv391n54 1 103840662 103841755 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546945,nsv546948,nsv546946,nsv546947,nsv546949 M 17421 0 5 LOC101928436,RNPC3 nsv946105 1 103897809 103902127 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779824,nssv1779855,nssv1779814,nssv1779905,nssv1779815,nssv1779901,nssv1779825,nssv1779881,nssv1779810,nssv1779871,nssv1779893,nssv1779849,nssv1779829,nssv1779853,nssv1779819,nssv1779839,nssv1779817,nssv1779843,nssv1779820,nssv1779904,nssv1779887,nssv1779848,nssv1779888,nssv1779882,nssv1779838,nssv1779875,nssv1779890,nssv1779866,nssv1779895,nssv1779845,nssv1779831,nssv1779851,nssv1779833,nssv1779873,nssv1779892,nssv1779896,nssv1779812,nssv1779844,nssv1779891,nssv1779880,nssv1779837,nssv1779876,nssv1779823,nssv1779884,nssv1779822,nssv1779835,nssv1779816,nssv1779869,nssv1779826,nssv1779841,nssv1779830,nssv1779836,nssv1779894,nssv1779879,nssv1779821,nssv1779861,nssv1779886,nssv1779898,nssv1779889,nssv1779897,nssv1779827,nssv1779903,nssv1779840,nssv1779867,nssv1779813,nssv1779832,nssv1779811,nssv1779877,nssv1779818,nssv1779868,nssv1779828,nssv1779852,nssv1779865,nssv1779834,nssv1779874,nssv1779860,nssv1779809,nssv1779858,nssv1779846,nssv1779902,nssv1779900,nssv1779878,nssv1779885,nssv1779872,nssv1779850,nssv1779847,nssv1779863,nssv1779842,nssv1779864,nssv1779856,nssv1779859,nssv1779883,nssv1779857,nssv1779899,nssv1779870,nssv1779854,nssv1779862 M 97 10 0 AMY2B,RNPC3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3893856 1 103899238 104099390 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25787340,essv25800291,essv25779579,essv25801498,essv25786428,essv25787572,essv25786995,essv25782617,essv25792913,essv25798422,essv25800073,essv25787059,essv25800387,essv25787539,essv25780553,essv25799267,essv25780960,essv25786905,essv25798522,essv25788738,essv25790862,essv25785811,essv25799954,essv25785797 M 3017 3 21 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B,RNPC3 dgv392n54 1 103899238 104107839 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546964,nsv546961,nsv546962,nsv546988,nsv546963,nsv546965,nsv546967,nsv546966,nsv546950,nsv546953,nsv546974 M 17421 14 0 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B,RNPC3 dgv214n100 1 103900163 103933870 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012179,nsv1002699,nsv1002148 M 29084 6 0 ACTG1P4,AMY2B dgv215n100 1 103900163 103965298 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003537,nsv1007099,nsv1003223,nsv1013279,nsv1014883,nsv1006497,nsv1014676,nsv1006256,nsv1002839,nsv1005640,nsv1009613 M 29084 95 0 ACTG1P4,AMY2A,AMY2B dgv216n100 1 103900163 103979549 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006020,nsv1004701,nsv1011003,nsv1012538,nsv1006970 M 29084 85 0 ACTG1P4,AMY2A,AMY2B dgv217n100 1 103900163 104041200 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013173,nsv1013113,nsv1009782,nsv1013997,nsv1000768,nsv998114,nsv1000137,nsv999791,nsv1012909,nsv1006786,nsv1009329,nsv999170 M 29084 52 0 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B dgv218n100 1 103900163 104069733 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000983,nsv1001037,nsv998680,nsv1000823,nsv1000575,nsv1009209,nsv1011775,nsv1009630,nsv1002572,nsv1000835,nsv1012491,nsv1011154,nsv1009028,nsv1007226,nsv997428 M 29084 170 0 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B nsv1012949 1 103900163 104110690 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470873,nssv3465161,nssv3479171 M 29084 3 0 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B dgv2e203 1 103900175 104105162 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array esv2763658,esv2764261 M 1109 153 97 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B RW_0002,RW_0004,RW_0005,RW_0010,RW_0013,RW_0014,RW_0018,RW_0031,RW_0045,RW_0061,RW_0063,RW_0071,RW_0079,RW_0080,RW_0084,RW_0087,RW_0112,RW_0116,RW_0119,RW_0123,RW_0128,RW_0129,RW_0131,RW_0132,RW_0147,RW_0148,RW_0149,RW_0166,RW_0168,RW_0175,RW_0178,RW_0179,RW_0180,RW_0186,RW_0190,RW_0193,RW_0195,RW_0203,RW_0207,RW_0208,RW_0209,RW_0210,RW_0211,RW_0213,RW_0215,RW_0220,RW_0221,RW_0237,RW_0238,RW_0249,RW_0260,RW_0266,RW_0275,RW_0280,RW_0281,RW_0283,RW_0286,RW_0292,RW_0293,RW_0299,RW_0315,RW_0318,RW_0333,RW_0335,RW_0346,RW_0357,RW_0359,RW_0503,RW_0505,RW_0506,RW_0508,RW_0511,RW_0524,RW_0529,RW_0564,RW_0567,RW_0571,RW_0577,RW_0586,RW_0590,RW_0593,RW_0596,RW_0597,RW_0601,RW_0606,RW_0607,RW_0613,RW_0616,RW_0617,RW_0630,RW_0634,RW_0652,RW_0658,RW_0666,SW_0002,SW_0006,SW_0009,SW_0015,SW_0017,SW_0019,SW_0020,SW_0030,SW_0032,SW_0048,SW_0049,SW_0057,SW_0063,SW_0072,SW_0073,SW_0086,SW_0089,SW_0102,SW_0103,SW_0121,SW_0145,SW_0148,SW_0158,SW_0160,SW_0164,SW_0170,SW_0175,SW_0186,SW_0187,SW_0189,SW_0199,SW_0200,SW_0201,SW_0256,SW_0271,SW_0286,SW_0313,SW_0323,SW_0368,SW_0369,SW_0509,SW_0554,SW_0569,SW_0575,SW_0607,SW_0609,SW_0623,SW_0635,SW_0647,SW_0648,SW_0651,SW_0653,SW_0661,SW_0702,SW_0717,SW_0760,SW_0785,SW_0786,SW_0789,SW_0803,SW_0813,SW_0822,SW_0832,SW_0835,SW_0844,SW_0846,SW_0859,SW_0883,SW_0884,SW_0885,SW_0888,SW_1003,SW_1012,SW_1020,SW_1021,SW_1028,SW_1042,SW_1043,SW_1045,SW_1054,SW_1065,SW_1068,SW_1074,SW_1080,SW_1087,SW_1101,SW_1105,SW_1109,SW_1112,SW_1113,SW_1114,SW_1119,SW_1130,SW_1140,SW_1147,SW_1149,SW_1152,SW_1156,SW_1162,SW_1163,SW_1182,SW_1190,SW_1210,SW_1213,SW_1221,SW_1228,SW_1230,SW_1240,SW_1242,SW_1257,SW_1259,SW_1263,SW_1270,SW_1284,SW_1285,SW_1314,SW_1317,SW_1318,SW_1322,SW_1325,SW_1330,SW_1335,SW_1337,SW_1361,SW_1366,SW_1370,SW_1372,SW_1374,SW_1384,SW_1386,SW_1395,SW_1398,SW_1402,SW_1408,SW_1409,SW_1412,SW_1413,SW_1417,SW_1424,SW_1430,SW_1439,SW_1448,SW_1451,SW_1455,SW_1457,SW_1469,SW_1478,SW_1482,SW_1484,SW_1509,SW_1510,SW_1517,SW_1523,SW_1527,SW_1571 dgv3n64 1 103904580 103930296 CNV gain Wang_et_al_2007 17921354 SNP array nsv818289,nsv818278 M 112 6 0 ACTG1P4,AMY2B NA11881,NA12239,NA19116,NA19120,NA19137,NA19159 nsv511132 1 103904580 103939623 CNV gain Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626698 M 1 1 0 ACTG1P4,AMY2B 1 dgv393n54 1 103904580 103961238 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546951,nsv546954 M 17421 7 0 ACTG1P4,AMY2B dgv394n54 1 103904580 103984811 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546952,nsv546958,nsv546957,nsv546956,nsv546973 M 17421 7 0 ACTG1P4,AMY2A,AMY2B nsv10428 1 103904751 104108181 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv19094,nssv13747,nssv15423,nssv14732,nssv13762,nssv14754,nssv20734,nssv17083,nssv15092,nssv13435,nssv20753,nssv20404,nssv13765,nssv15116,nssv21083,nssv14411,nssv17413,nssv15428,nssv21413,nssv13085,nssv20074,nssv15446,nssv19744,nssv15776,nssv16761,nssv15766,nssv14092,nssv15118,nssv13415,nssv15760,nssv16757,nssv15436,nssv15451,nssv13105,nssv15114,nssv18089,nssv14097,nssv15096,nssv13751,nssv16095,nssv13745,nssv13767,nssv16088,nssv14422,nssv18780,nssv16418,nssv15098,nssv18434,nssv14738,nssv17087,nssv15758,nssv16427,nssv15444,nssv13417,nssv18764,nssv14081 M 31 19 7 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12802,NA12872,NA18504,NA18517,NA18537,NA18552,NA18563,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 esv23292 1 103905209 104118541 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11093,esv21252,esv14615,esv16702,esv16449,esv11430,esv12324,esv16570,esv18119,esv20377,esv16038,esv11322,esv11903,esv19650,esv10004 M 40 21 11 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12239,NA12287,NA12414,NA12489,NA12749,NA12828,NA15510,NA18502,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19129,NA19147,NA19190,NA19225,NA19257 esv33927 1 103906493 103965256 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv93782,essv96994,essv99027,essv97239,essv99941,essv98741,essv93537,essv98200,essv94829,essv101540 M 51 10 0 ACTG1P4,AMY2A,AMY2B 21603,21606,21772,21791,21817,21938,21972,22075,22086,22128 nsv546955 1 103907158 103962333 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719735 M 17421 0 1 ACTG1P4,AMY2A,AMY2B dgv395n54 1 103907158 104027842 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546960,nsv546959,nsv546969,nsv546972 M 17421 4 0 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B nsv517215 1 103907158 104144421 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv689302,nssv676029,nssv689783,nssv652881,nssv680609,nssv675863,nssv677517,nssv658115,nssv668444,nssv688568,nssv667055,nssv655140,nssv689642,nssv659396,nssv654029,nssv685020,nssv691321,nssv662179,nssv661265,nssv668374,nssv662162,nssv693420,nssv655273,nssv689696,nssv662552,nssv701551,nssv665921,nssv673576,nssv652851,nssv666199,nssv671100,nssv667390,nssv689055,nssv694004,nssv672517,nssv669653,nssv658586,nssv662118,nssv663350,nssv670430,nssv652155,nssv669736,nssv669783,nssv661892,nssv689741,nssv667356,nssv656427,nssv661247,nssv692505,nssv681455,nssv682585,nssv700627,nssv684662,nssv676498,nssv684879,nssv700146,nssv681934,nssv657469,nssv656532,nssv658618,nssv676244,nssv672123,nssv655958,nssv698380,nssv699575,nssv661436,nssv673940,nssv660447,nssv663227,nssv658161,nssv664445,nssv661787,nssv661358,nssv668749,nssv657883,nssv679391 M 2026 75 1 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B dgv396n54 1 103908591 103937898 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546968,nsv546970,nsv546971 M 17421 3 0 ACTG1P4,AMY2B nsv442937 1 103910761 103960907 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1618243,nssv1618245,nssv1618218,nssv1618223,nssv1618238,nssv1618232,nssv1618221,nssv1618241,nssv1618219,nssv1618220,nssv1618227,nssv1618225,nssv1618222,nssv1618237,nssv1618240,nssv1618236,nssv1618226,nssv1618228,nssv1618229,nssv1618244,nssv1618231,nssv1618230,nssv1618242,nssv1618234,nssv1618233,nssv1618239 M 270 26 0 ACTG1P4,AMY2B NA10859,NA11881,NA12155,NA12239,NA12753,NA12763,NA12873,NA18517,NA18859,NA18871,NA18913,NA18914,NA19099,NA19100,NA19120,NA19128,NA19137,NA19152,NA19154,NA19159,NA19171,NA19173,NA19200,NA19202,NA19221,NA19222 dgv397n54 1 103911245 104119937 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547017,nsv546975 M 17421 0 2 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B nsv546976 1 103911245 104221353 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719760 M 17421 1 0 ACTG1P4,AMY1A,AMY1B,AMY1C,AMY2A,AMY2B nsv514909 1 103911408 103974720 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2846750,nssv2846737,nssv2846768,nssv2846738,nssv2846794,nssv2846739,nssv2846760,nssv2846740,nssv2846784,nssv2845328,nssv2846786,nssv2846741,nssv2846787,nssv2845269,nssv2846748,nssv2846661,nssv2846746,nssv2846713,nssv2846791,nssv2845282,nssv2846762,nssv2845389,nssv2846790,nssv2845428,nssv2846753,nssv2845425,nssv2846756,nssv2845241,nssv2846778,nssv2845276,nssv2846792,nssv2845396,nssv2846781,nssv2845171,nssv2846772,nssv2845397,nssv2846751,nssv2845233,nssv2846757,nssv2845169,nssv2846764,nssv2846697,nssv2846759,nssv2845438,nssv2846793,nssv2845201,nssv2846758,nssv2845346,nssv2846766,nssv2845223,nssv2846788,nssv2845292,nssv2846761,nssv2845280,nssv2846747,nssv2846659,nssv2846779,nssv2845324,nssv2846749,nssv2845435,nssv2846763,nssv2845256,nssv2846744,nssv2845347,nssv2846780,nssv2845238,nssv2846767,nssv2845245,nssv2846755,nssv2846662,nssv2846775,nssv2846678,nssv2846776,nssv2845478,nssv2846782,nssv2845358,nssv2846774,nssv2845503,nssv2846743,nssv2846672,nssv2846771,nssv2845289,nssv2846745,nssv2845307,nssv2846770,nssv2846718,nssv2846789,nssv2845372,nssv2846765,nssv2845424,nssv2846783,nssv2845286,nssv2846773,nssv2845203,nssv2846754,nssv2845463,nssv2846752,nssv2845263,nssv2846785,nssv2845434,nssv2846769,nssv2845168,nssv2846777,nssv2845198,nssv2845221,nssv2846720,nssv2846721,nssv2845331,nssv2845180,nssv2845252,nssv2845333,nssv2845334,nssv2845190,nssv2845213,nssv2845381,nssv2845253,nssv2845501,nssv2845229,nssv2846677,nssv2845432,nssv2845205,nssv2846700,nssv2845349,nssv2845175,nssv2846656,nssv2845261,nssv2845482,nssv2845250,nssv2846705,nssv2845196,nssv2846683,nssv2845407,nssv2846657,nssv2845336,nssv2845390,nssv2845371,nssv2845359,nssv2845412,nssv2845350,nssv2846679,nssv2845255,nssv2845352,nssv2845262,nssv2845502,nssv2846734,nssv2846665,nssv2846708,nssv2845353,nssv2845327,nssv2845373,nssv2845457,nssv2846685,nssv2845301,nssv2845228,nssv2845204,nssv2845392,nssv2845257,nssv2846692,nssv2845393,nssv2845469,nssv2846712,nssv2845298,nssv2845216,nssv2845401,nssv2846670,nssv2845217,nssv2845308,nssv2845340,nssv2845192,nssv2845491,nssv2845266,nssv2845473,nssv2845339,nssv2845399,nssv2845355,nssv2845288,nssv2845243,nssv2845423,nssv2845442,nssv2845467,nssv2846658,nssv2845450,nssv2845486,nssv2845414,nssv2845472,nssv2845464,nssv2845391,nssv2845299,nssv2845475,nssv2845409,nssv2845345,nssv2845375,nssv2846702,nssv2845294,nssv2845454,nssv2845395,nssv2846691,nssv2845232,nssv2845369,nssv2845185,nssv2845504,nssv2845498,nssv2846696,nssv2845408,nssv2845356,nssv2845244,nssv2845300,nssv2845183,nssv2845212,nssv2845200,nssv2845459,nssv2845422,nssv2845427,nssv2845382,nssv2846723,nssv2845415,nssv2845449,nssv2846660,nssv2845248,nssv2845471,nssv2846687,nssv2846671,nssv2845368,nssv2845495,nssv2845247,nssv2845342,nssv2845492,nssv2845344,nssv2845493,nssv2846666,nssv2845323,nssv2845313,nssv2845360,nssv2845386,nssv2845489,nssv2845304,nssv2845384,nssv2845494,nssv2845318,nssv2845268,nssv2845320,nssv2845187,nssv2845219,nssv2846664,nssv2845411,nssv2845431,nssv2845488,nssv2845173,nssv2846682,nssv2845207,nssv2846673,nssv2846704,nssv2845439,nssv2845279,nssv2846733,nssv2845215,nssv2846714,nssv2846699,nssv2845295,nssv2845302,nssv2846694,nssv2845385,nssv2845436,nssv2845260,nssv2845227,nssv2845210,nssv2846725,nssv2846726,nssv2845330,nssv2846732,nssv2845366,nssv2845484,nssv2845406,nssv2846686,nssv2845420,nssv2845452,nssv2845296,nssv2845240,nssv2845273,nssv2845211,nssv2845410,nssv2845267,nssv2845361,nssv2845311,nssv2845364,nssv2845236,nssv2845315,nssv2845225,nssv2845239,nssv2846690,nssv2845376,nssv2846710,nssv2845455,nssv2845218,nssv2845421,nssv2845230,nssv2845446,nssv2846742,nssv2845357,nssv2845259,nssv2845461,nssv2845284,nssv2845170,nssv2845430,nssv2846717,nssv2845234,nssv2845483,nssv2845297,nssv2846736,nssv2846729,nssv2845335,nssv2845206,nssv2845367,nssv2845354,nssv2846735,nssv2845480,nssv2845496,nssv2845265,nssv2845465,nssv2845310,nssv2845270,nssv2845202,nssv2845312,nssv2845466,nssv2845443,nssv2845388,nssv2845283,nssv2845326,nssv2845277,nssv2845447,nssv2845305,nssv2846684,nssv2845178,nssv2845188,nssv2845226,nssv2846716,nssv2845191,nssv2845402,nssv2845199,nssv2845404,nssv2845419,nssv2845325,nssv2845258,nssv2846707,nssv2845242,nssv2845474,nssv2845418,nssv2845264,nssv2845231,nssv2845363,nssv2845189,nssv2846728,nssv2845481,nssv2846681,nssv2846693,nssv2845285,nssv2845413,nssv2845329,nssv2845172,nssv2846655,nssv2845332,nssv2845348,nssv2845319,nssv2846727,nssv2845405,nssv2846706,nssv2846715,nssv2845387,nssv2845476,nssv2845379,nssv2845177,nssv2845440,nssv2845179,nssv2846711,nssv2845487,nssv2845462,nssv2845445,nssv2845468,nssv2845197,nssv2845272,nssv2845271,nssv2845343,nssv2845224,nssv2845208,nssv2845220,nssv2845433,nssv2845338,nssv2846719,nssv2845306,nssv2845505,nssv2845246,nssv2845281,nssv2845287,nssv2845437,nssv2845380,nssv2845309,nssv2846730,nssv2845290,nssv2846674,nssv2845448,nssv2845249,nssv2845460,nssv2845322,nssv2845485,nssv2845314,nssv2845429,nssv2845291,nssv2845317,nssv2845490,nssv2846688,nssv2845400,nssv2845394,nssv2846669,nssv2845370,nssv2845477,nssv2845470,nssv2846731,nssv2845451,nssv2845362,nssv2846722,nssv2845500,nssv2845275,nssv2845293,nssv2846680,nssv2845321,nssv2846689,nssv2846709,nssv2845254,nssv2846668,nssv2845479,nssv2845209,nssv2845195,nssv2846695,nssv2845417,nssv2846663,nssv2845337,nssv2845235,nssv2845383,nssv2845426,nssv2845416,nssv2846703,nssv2845278,nssv2845497,nssv2846667,nssv2846676,nssv2845184,nssv2845403,nssv2845398,nssv2845222,nssv2845377,nssv2845194,nssv2845181,nssv2845341,nssv2845453,nssv2846675,nssv2845186,nssv2845316,nssv2845351,nssv2845237,nssv2845365,nssv2845176,nssv2845458,nssv2845378,nssv2845499,nssv2846724,nssv2845441,nssv2845456,nssv2845214,nssv2845182,nssv2845193,nssv2845274,nssv2845174,nssv2845444,nssv2845303,nssv2845251,nssv2846701,nssv2846698,nssv2845374 M 2366 478 0 ACTG1P4,AMY2A,AMY2B NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07019,NA07022,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv946106 1 103913852 103923780 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779931,nssv1779964,nssv1779990,nssv1779939,nssv1779907,nssv1779999,nssv1779918,nssv1780002,nssv1779923,nssv1779993,nssv1779913,nssv1779945,nssv1779926,nssv1779943,nssv1779922,nssv1780000,nssv1779911,nssv1779980,nssv1779984,nssv1779982,nssv1779916,nssv1779973,nssv1779914,nssv1779955,nssv1779987,nssv1779958,nssv1779935,nssv1779974,nssv1779909,nssv1779956,nssv1779930,nssv1779966,nssv1779937,nssv1779977,nssv1779908,nssv1779970,nssv1779927,nssv1779963,nssv1779989,nssv1779952,nssv1779992,nssv1779946,nssv1779921,nssv1779948,nssv1779988,nssv1779932,nssv1779920,nssv1779940,nssv1779928,nssv1779965,nssv1779934,nssv1779933,nssv1779924,nssv1779976,nssv1779917,nssv1779968,nssv1779910,nssv1779972,nssv1779986,nssv1779997,nssv1779991,nssv1779951,nssv1779985,nssv1779936,nssv1779925,nssv1779944,nssv1779919,nssv1779947,nssv1779912,nssv1779959,nssv1779915,nssv1779971,nssv1779983,nssv1779957,nssv1779938,nssv1779960,nssv1779929,nssv1779953,nssv1779949,nssv1779994,nssv1779942,nssv1779906,nssv1779979,nssv1779981,nssv1779941,nssv1779969,nssv1779996,nssv1779995,nssv1779961,nssv1779978,nssv1779975,nssv1779954,nssv1779950,nssv1779962,nssv1779967,nssv1779998,nssv1780001 M 97 10 0 ACTG1P4,AMY2B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1004547 1 103915864 103923698 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586423 M 3 1 0 AMY2B HuRef nsv823686 1 103915973 103924266 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432197 M 31 1 0 AMY2B NA18972 dgv398n54 1 103916540 103967847 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546978,nsv546977 M 17421 2 0 AMY2A,AMY2B nsv546979 1 103922705 103930606 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719763 M 17421 1 0 AMY2B dgv399n54 1 103923200 103935981 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546980,nsv546982 M 17421 2 0 AMY2B dgv400n54 1 103924079 103988831 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546981,nsv546986,nsv546985 M 17421 0 3 AMY2A nsv546983 1 103926415 103959872 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719767 M 17421 1 0 "" nsv947437 1 103926465 103932106 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2763906 M 97 1 0 "" HGDP00521 dgv401n54 1 103928117 104104962 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547031,nsv546999,nsv547134,nsv546998,nsv547065,nsv547143,nsv546987,nsv547030,nsv547107,nsv547105,nsv547121,nsv546984,nsv547148,nsv547144,nsv547153,nsv547032,nsv547133,nsv547077,nsv547064,nsv547156,nsv547015,nsv547155,nsv547123,nsv546997,nsv547035,nsv547033,nsv547112,nsv547014,nsv547132,nsv546996 M 17421 0 81 AMY1A,AMY1B,AMY1C,AMY2A nsv2176 1 103928528 104062006 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9850,nssv10159 M 9 0 2 AMY1A,AMY1B,AMY1C,AMY2A NA18507,NA18956 dgv219n100 1 103929847 104062717 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000715,nsv1013912 M 29084 0 2 AMY1A,AMY1B,AMY1C,AMY2A nsv946108 1 103932106 103954586 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780045,nssv1781036,nssv1781028,nssv1780047,nssv1780042,nssv1780088,nssv1780099,nssv1780072,nssv1781029,nssv1780074,nssv1780027,nssv1781034,nssv1780040,nssv1781033,nssv1780097,nssv1780076,nssv1780036,nssv1780091,nssv1780100,nssv1780094,nssv1780026,nssv1780052,nssv1780025,nssv1780081,nssv1780021,nssv1780095,nssv1780031,nssv1780043,nssv1780028,nssv1780090,nssv1780044,nssv1780059,nssv1780030,nssv1780070,nssv1780101,nssv1780084,nssv1780022,nssv1781031,nssv1780049,nssv1781032,nssv1780038,nssv1780089,nssv1780039,nssv1780077,nssv1780098,nssv1780079,nssv1780102,nssv1780068,nssv1780029,nssv1780064,nssv1780103,nssv1780096,nssv1780051,nssv1780062,nssv1780032,nssv1781037,nssv1780023,nssv1780093,nssv1780048,nssv1780057,nssv1780037,nssv1780086,nssv1780041,nssv1780073,nssv1780034,nssv1781039,nssv1780035,nssv1780085,nssv1780033,nssv1780087,nssv1781030,nssv1780055,nssv1780024,nssv1780066,nssv1780078,nssv1780054,nssv1780060,nssv1780082,nssv1780071,nssv1780046,nssv1780080,nssv1780083,nssv1780053,nssv1781038,nssv1780058,nssv1781035,nssv1780069,nssv1780050,nssv1780061,nssv1780065,nssv1780056,nssv1780075,nssv1780020,nssv1781040,nssv1780063,nssv1780067,nssv1780092 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv3n14 1 103933280 104104962 CNV loss Cooper_et_al_2008 18776910 SNP array nsv433186,nsv433187 M 9 0 2 AMY1A,AMY1B,AMY1C,AMY2A NA12156,NA15510 dgv220n100 1 103933870 104110690 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004535,nsv1012837,nsv1008091 M 29084 4 3 AMY1A,AMY1B,AMY1C,AMY2A esv1003868 1 103938237 104104921 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586624 M 3 1 0 AMY1A,AMY1B,AMY1C,AMY2A HuRef esv3345212 1 103938552 103941550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691705 M 185 1 0 "" NA19239 dgv402n54 1 103938774 103944636 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv546989,nsv547002,nsv547003,nsv546990,nsv546991 M 17421 0 6 "" dgv403n54 1 103938774 103959872 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547004,nsv547005,nsv546992 M 17421 0 3 "" dgv404n54 1 103938774 104028244 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547023,nsv547001,nsv546993,nsv547009,nsv546995,nsv546994 M 17421 0 7 AMY1A,AMY1B,AMY1C,AMY2A nsv547000 1 103939210 103955289 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719795 M 17421 1 0 "" dgv405n54 1 103939976 104075579 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547012,nsv547006 M 17421 0 2 AMY1A,AMY1B,AMY1C,AMY2A dgv406n54 1 103940395 103944636 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547007,nsv547008 M 17421 0 3 "" dgv407n54 1 103941535 103990132 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547029,nsv547010 M 17421 0 2 AMY2A dgv408n54 1 103941535 104081267 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547013,nsv547011 M 17421 3 0 AMY1A,AMY1B,AMY1C,AMY2A nsv547016 1 103941535 104107839 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719844,nssv719846,nssv719845 M 17421 1 2 AMY1A,AMY1B,AMY1C,AMY2A dgv409n54 1 103943401 103962333 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547018,nsv547020,nsv547019,nsv547021 M 17421 0 5 AMY2A nsv547022 1 103945772 103973167 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719853 M 17421 1 0 AMY2A esv3372889 1 103946552 103955250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691706 M 185 1 0 "" NA12892 dgv410n54 1 103948080 103958899 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547025,nsv547024,nsv547027,nsv547026 M 17421 0 9 "" nsv547028 1 103948080 103962788 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719865,nssv719864 M 17421 0 2 AMY2A esv3893867 1 103948080 104012568 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797619,essv25797380,essv25796794 M 3017 0 3 AMY1A,AMY1B,AMY1C,AMY2A dgv411n54 1 103954623 103995612 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547100,nsv547058,nsv547075,nsv547099,nsv547034,nsv547101 M 17421 0 6 AMY2A dgv412n54 1 103954623 104099390 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547140,nsv547036,nsv547154,nsv547162 M 17421 8 11 AMY1A,AMY1B,AMY1C,AMY2A dgv413n54 1 103955289 103958899 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547049,nsv547048,nsv547047,nsv547037,nsv547039,nsv547038,nsv547046,nsv547044,nsv547045 M 17421 0 52 "" dgv414n54 1 103955289 103960707 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547050,nsv547052,nsv547040 M 17421 0 5 "" dgv415n54 1 103955289 103962788 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547071,nsv547070,nsv547053,nsv547041 M 17421 0 30 AMY2A nsv547042 1 103955289 103969048 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719895,nssv719896 M 17421 0 2 AMY2A dgv416n54 1 103955289 104028244 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547106,nsv547117,nsv547083,nsv547059,nsv547109,nsv547104,nsv547060,nsv547130,nsv547102,nsv547043 M 17421 0 11 AMY1A,AMY1B,AMY1C,AMY2A dgv417n54 1 103955388 103959872 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547069,nsv547051 M 17421 3 11 "" nsv547054 1 103955388 103967847 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv719982,nssv719981,nssv719979,nssv719980 M 17421 1 3 AMY2A dgv418n54 1 103955388 103974735 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547095,nsv547055,nsv547074 M 17421 4 0 AMY2A dgv419n54 1 103955388 103984801 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547056,nsv547057 M 17421 0 2 AMY2A dgv420n54 1 103955388 104075579 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547137,nsv547119,nsv547084,nsv547063,nsv547061,nsv547062 M 17421 0 6 AMY1A,AMY1B,AMY1C,AMY2A dgv421n54 1 103956295 103958533 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547066,nsv547067,nsv547078 M 17421 0 5 "" dgv422n54 1 103956295 103958899 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547085,nsv547068 M 17421 5 0 "" dgv423n54 1 103956295 103969048 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547094,nsv547090,nsv547073,nsv547072 M 17421 12 0 AMY2A dgv424n54 1 103956295 104023976 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547118,nsv547131,nsv547076,nsv547103,nsv547115,nsv547114 M 17421 7 0 AMY1A,AMY1B,AMY1C,AMY2A dgv425n54 1 103956457 103959872 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547086,nsv547080,nsv547079 M 17421 0 6 "" dgv426n54 1 103956457 103961631 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547082,nsv547081 M 17421 0 3 AMY2A dgv427n54 1 103956800 103960707 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547087,nsv547088 M 17421 2 0 "" nsv547089 1 103956800 103962788 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720034 M 17421 1 0 AMY2A dgv221n100 1 103957313 104041200 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002819,nsv1006169,nsv1009203 M 29084 18 32 AMY1A,AMY1B,AMY1C,AMY2A dgv222n100 1 103957313 104061750 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008331,nsv998655,nsv1011120,nsv1002619,nsv1005913 M 29084 15 0 AMY1A,AMY1B,AMY1C,AMY2A dgv223n100 1 103957313 104069733 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010663,nsv1009155,nsv1001407,nsv1008367,nsv1008708,nsv1011106,nsv1009989,nsv1004448,nsv997523,nsv1013722,nsv1014096,nsv1006312 M 29084 359 445 AMY1A,AMY1B,AMY1C,AMY2A dgv224n100 1 103957313 104069733 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003836,nsv1011687,nsv1013473,nsv1005860,nsv997338,nsv999699,nsv1003115,nsv1008039,nsv1010112,nsv1011245 M 29084 0 24 AMY1A,AMY1B,AMY1C,AMY2A dgv225n100 1 103957313 104115564 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002174,nsv1012670,nsv1012377,nsv999535,nsv1012026 M 29084 5 0 AMY1A,AMY1B,AMY1C,AMY2A dgv428n54 1 103957467 103959872 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547091,nsv547092 M 17421 6 0 "" dgv429n54 1 103957467 103962788 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547093,nsv547098 M 17421 0 2 AMY2A dgv430n54 1 103957467 104001509 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547096,nsv547113 M 17421 2 0 AMY1A,AMY1B,AMY1C,AMY2A dgv431n54 1 103957467 104110192 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547120,nsv547122,nsv547139,nsv547138,nsv547097,nsv547124,nsv547157,nsv547163,nsv547111 M 17421 9 0 AMY1A,AMY1B,AMY1C,AMY2A nsv946109 1 103958556 103977589 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781051,nssv1781094,nssv1781060,nssv1781080,nssv1781070,nssv1781129,nssv1781063,nssv1781133,nssv1781062,nssv1781114,nssv1781050,nssv1781116,nssv1781061,nssv1781099,nssv1781048,nssv1781107,nssv1781057,nssv1781115,nssv1781046,nssv1781074,nssv1781125,nssv1781131,nssv1781053,nssv1781105,nssv1781123,nssv1781041,nssv1781055,nssv1781078,nssv1781056,nssv1781109,nssv1781054,nssv1781089,nssv1781065,nssv1781117,nssv1781045,nssv1781083,nssv1781049,nssv1781071,nssv1781043,nssv1781068,nssv1781120,nssv1781101,nssv1781119,nssv1781100,nssv1781126,nssv1781104,nssv1781072,nssv1781066,nssv1781047,nssv1781087,nssv1781042,nssv1781064,nssv1781069,nssv1781079,nssv1781124,nssv1781093,nssv1781122,nssv1781084,nssv1781058,nssv1781090,nssv1781127,nssv1781082,nssv1781121,nssv1781103,nssv1781059,nssv1781108,nssv1781118,nssv1781098,nssv1781052,nssv1781086,nssv1781044,nssv1781092,nssv1781076,nssv1781081,nssv1781136,nssv1781067,nssv1781091,nssv1781130,nssv1781106,nssv1781137,nssv1781073,nssv1781135,nssv1781111,nssv1781088,nssv1781128,nssv1781132,nssv1781113,nssv1781096,nssv1781102,nssv1781097,nssv1781095,nssv1781110,nssv1781134,nssv1781112,nssv1781075,nssv1781077,nssv1781085 M 97 10 0 AMY2A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv226n100 1 103958672 104110655 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009054,nsv1006321,nsv1000330,nsv1014889,nsv997803,nsv1002781 M 29084 0 7 AMY1A,AMY1B,AMY1C,AMY2A dgv1n31 1 103960803 104012024 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nsv471475,nsv471326 M 3 3 0 AMY1A,AMY1B,AMY1C,AMY2A JDW,NA18507,YH nsv471345 1 103961522 103969916 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548033,nssv548031,nssv548032 M 3 3 0 AMY2A JDW,NA18507,YH nsv482048 1 103961522 103969916 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558409 M 1 1 0 AMY2A KB1 dgv58n67 1 103962219 104012579 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv823709,nsv823698 M 31 2 0 AMY1A,AMY1B,AMY1C,AMY2A NA18566,NA18972 dgv432n54 1 103966748 103998603 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547108,nsv547125,nsv547126 M 17421 0 3 AMY2A dgv433n54 1 103966748 104094454 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547167,nsv547136,nsv547110,nsv547165 M 17421 5 0 AMY1A,AMY1B,AMY1C,AMY2A nsv547116 1 103967847 104021982 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720078,nssv720077,nssv720076 M 17421 1 2 AMY1A,AMY1B,AMY1C,AMY2A dgv434n54 1 103969048 104015703 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547135,nsv547141,nsv547149,nsv547146,nsv547145,nsv547151,nsv547150,nsv547152,nsv547127,nsv547128,nsv547129 M 17421 0 13 AMY1A,AMY1B,AMY1C,AMY2A dgv435n54 1 103971843 104099390 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547168,nsv547142,nsv547170,nsv547158,nsv547161 M 17421 0 5 AMY1A,AMY1B,AMY1C nsv547147 1 103973167 104020683 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720123 M 17421 0 1 AMY1A,AMY1B,AMY1C nsv469513 1 103979517 104094855 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1674883,nssv1675322,nssv1674116,nssv1673403,nssv1672523,nssv1675417,nssv1675741,nssv1672830,nssv1675195,nssv1673049,nssv1675290,nssv1675383,nssv1673987,nssv1676620,nssv1674863,nssv1675719,nssv1674895,nssv1675867,nssv1675805,nssv1673632,nssv1676552,nssv1675969,nssv1672849,nssv1673367,nssv1676420,nssv1674407,nssv1674780,nssv1674605,nssv1675146,nssv1672322,nssv1674781,nssv1673861,nssv1672685,nssv1673255,nssv1673864,nssv1672177,nssv1674046,nssv1676002,nssv1672529,nssv1676246,nssv1673788,nssv1673158,nssv1675918,nssv1675300,nssv1675651,nssv1676269,nssv1676500,nssv1673731,nssv1672513,nssv1675483,nssv1674946,nssv1674052,nssv1672947,nssv1675197,nssv1674254,nssv1672951,nssv1672246,nssv1672195,nssv1673880,nssv1673216,nssv1673590,nssv1674326,nssv1672245,nssv1674758,nssv1673559,nssv1676394,nssv1674624,nssv1673997,nssv1672734,nssv1672359,nssv1675252,nssv1675891,nssv1674997,nssv1675770,nssv1672876,nssv1676061,nssv1675178,nssv1673589,nssv1676325,nssv1673247,nssv1672098,nssv1676331,nssv1673956,nssv1675895,nssv1674572,nssv1674702,nssv1674701,nssv1673301,nssv1672392,nssv1673366,nssv1674996,nssv1673715,nssv1674995,nssv1673447,nssv1676258,nssv1674282,nssv1676454,nssv1672398,nssv1672980,nssv1675443,nssv1673436,nssv1672714,nssv1675147,nssv1676480,nssv1673292,nssv1673907,nssv1674862,nssv1675014,nssv1676338,nssv1674179,nssv1676387,nssv1676337,nssv1675006,nssv1672111,nssv1676345,nssv1675870,nssv1673335,nssv1673223,nssv1674289,nssv1674802,nssv1672217,nssv1672579,nssv1674434,nssv1675906,nssv1673502,nssv1672657,nssv1672713,nssv1673394,nssv1676357,nssv1673550,nssv1676461,nssv1672110,nssv1674137,nssv1674300,nssv1675437,nssv1672105,nssv1674297,nssv1672816,nssv1674150,nssv1672821,nssv1672573,nssv1675046,nssv1672090,nssv1673145,nssv1675733,nssv1674843,nssv1672636,nssv1673451,nssv1672583,nssv1672584,nssv1675448,nssv1674313,nssv1676694,nssv1673771,nssv1675285,nssv1672267,nssv1676170,nssv1674175,nssv1675693,nssv1675909,nssv1672236,nssv1673349,nssv1676681,nssv1675444,nssv1673581,nssv1675107,nssv1675475,nssv1676607,nssv1676528,nssv1676505,nssv1672497,nssv1676460,nssv1673305,nssv1675114,nssv1676608,nssv1673237,nssv1676612,nssv1674545,nssv1673038,nssv1672506,nssv1672909 M 265 181 0 AMY1A,AMY1B,AMY1C nsv471677 1 103979518 104094855 CNV gain+loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv548758,nssv548754,nssv548762,nssv548750,nssv548751,nssv548727,nssv548745,nssv548763,nssv548731,nssv548749,nssv548748,nssv548746,nssv548733,nssv548760,nssv548752,nssv548742,nssv548759,nssv548770,nssv548741,nssv548764,nssv548756,nssv548728,nssv548757,nssv548767,nssv548761,nssv548734,nssv548771,nssv548738,nssv548755,nssv548729,nssv548736,nssv548765,nssv548740,nssv548768,nssv548735,nssv548747,nssv548744,nssv548766,nssv548753,nssv548739,nssv548732,nssv548730,nssv548769 M 48 1 42 AMY1A,AMY1B,AMY1C JK1051A,JK1058B,JK1061,JK1688B,JK776,NA10469,NA10470,NA10471,NA10472,NA10473,NA10492,NA10493,NA10494,NA10495,NA10496,NA10967,NA10969,NA10970,NA10971,NA10976,NA10979,NA11521,NA11523,NA11776,NA15724,NA15725,NA15728,NA15729,NA15730,NA15731,NA15732,NA15733,NA16688,NA16689,NA17014,NA17015,NA17016,NA17017,NA17051,NA17052,NA17058,NA17059,P86GA esv3440390 1 103980352 104003350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691707 M 185 1 0 AMY1A,AMY1B,AMY1C NA12892 esv3433852 1 103980652 103984350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691710 M 185 1 0 "" NA19239 dgv436n54 1 103984801 104020297 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547164,nsv547159,nsv547160 M 17421 0 5 AMY1A,AMY1B,AMY1C esv3391351 1 103986852 103989350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691711 M 185 1 0 "" NA19239 nsv547166 1 103989218 104031651 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720146 M 17421 0 1 AMY1A,AMY1B,AMY1C nsv511121 1 103989305 104050954 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622424 M 4 0 0 AMY1A,AMY1B,AMY1C NA10860 dgv437n54 1 103989831 104063421 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547169,nsv547171 M 17421 2 0 AMY1A,AMY1B,AMY1C esv3333467 1 103989852 104001650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691712 M 185 1 0 AMY1A,AMY1B,AMY1C NA19239 nsv547172 1 103991643 104063231 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720153 M 17421 0 1 AMY1A,AMY1B,AMY1C nsv7179 1 103995201 104014104 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10162 M 9 0 0 AMY1A,AMY1B,AMY1C NA18956 nsv946110 1 103999712 104050192 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778797,nssv1778824,nssv1778781,nssv1778810,nssv1778789,nssv1778861,nssv1778787,nssv1778860,nssv1778792,nssv1778833,nssv1778850,nssv1778831,nssv1778788,nssv1778816,nssv1778783,nssv1778808,nssv1778780,nssv1778838,nssv1778854,nssv1778836,nssv1778794,nssv1778867,nssv1778853,nssv1778848,nssv1778774,nssv1778802,nssv1778786,nssv1781138,nssv1778791,nssv1778835,nssv1778790,nssv1778798,nssv1778858,nssv1778842,nssv1778782,nssv1778841,nssv1778796,nssv1778827,nssv1778800,nssv1778795,nssv1778779,nssv1778807,nssv1778856,nssv1778843,nssv1778855,nssv1778799,nssv1778778,nssv1778865,nssv1778784,nssv1778832,nssv1778851,nssv1778814,nssv1778803,nssv1778846,nssv1778775,nssv1778840,nssv1778785,nssv1778830,nssv1778777,nssv1778859,nssv1778776,nssv1778821,nssv1778857,nssv1778826,nssv1778849,nssv1778862,nssv1778793,nssv1778847,nssv1778773,nssv1778818,nssv1778801,nssv1778811,nssv1778852,nssv1778828,nssv1778844,nssv1778819,nssv1778863,nssv1778866,nssv1778812,nssv1778845,nssv1778825,nssv1778868,nssv1778813,nssv1778834,nssv1778839,nssv1778809,nssv1778820,nssv1778817,nssv1778815,nssv1778829,nssv1778804,nssv1778822,nssv1778837,nssv1778806,nssv1778805,nssv1778823,nssv1778864 M 97 10 0 AMY1A,AMY1B,AMY1C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547173 1 104001509 104023976 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720154 M 17421 1 0 AMY1A,AMY1B,AMY1C dgv438n54 1 104004811 104100767 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547186,nsv547174,nsv547184 M 17421 0 3 AMY1A,AMY1B,AMY1C nsv547175 1 104007545 104021982 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720156 M 17421 0 1 AMY1A,AMY1B,AMY1C dgv439n54 1 104010569 104023976 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547176,nsv547177 M 17421 2 0 "" esv3446869 1 104011052 104012650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691713 M 185 1 0 "" NA19239 esv3442352 1 104011052 104021050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691714 M 185 1 0 "" NA12892 dgv440n54 1 104011933 104021982 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547178,nsv547181,nsv547182 M 17421 0 3 "" dgv441n54 1 104012457 104017471 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547180,nsv547179 M 17421 0 2 "" dgv442n54 1 104013599 104078097 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547191,nsv547192,nsv547199,nsv547188,nsv547195,nsv547183 M 17421 6 0 AMY1A,AMY1B,AMY1C nsv547185 1 104013599 104099390 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720166,nssv720168,nssv720167 M 17421 1 2 AMY1A,AMY1B,AMY1C nsv471437 1 104014190 104108542 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548355,nssv548133,nssv548244 M 3 3 0 AMY1A,AMY1B,AMY1C JDW,NA18507,YH nsv547187 1 104020683 104028244 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720170 M 17421 0 1 "" dgv443n54 1 104022595 104028244 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547189,nsv547190 M 17421 0 2 "" dgv227n100 1 104023042 104069733 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999121,nsv1005253 M 29084 124 75 AMY1A,AMY1B,AMY1C dgv228n100 1 104023042 104069733 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009471,nsv1000273 M 29084 0 5 AMY1A,AMY1B,AMY1C nsv1008015 1 104023042 104108769 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701128,nssv3502242 M 29084 1 1 AMY1A,AMY1B,AMY1C dgv229n100 1 104023042 104110690 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006886,nsv997283 M 29084 2 0 AMY1A,AMY1B,AMY1C dgv444n54 1 104024421 104028630 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547194,nsv547193,nsv547196 M 17421 0 4 "" nsv508028 1 104024688 104030688 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618501 M 4 0 0 "" CHM nsv547197 1 104025186 104063258 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720181 M 17421 0 1 AMY1A,AMY1B,AMY1C nsv547198 1 104025370 104028244 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720185,nssv720184,nssv720182,nssv720183,nssv720186,nssv720187 M 17421 0 6 "" nsv547200 1 104025801 104110192 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720189 M 17421 1 0 AMY1A,AMY1B,AMY1C esv3349637 1 104029752 104034250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691715 M 185 1 0 AMY1A,AMY1B,AMY1C NA19239 dgv445n54 1 104031651 104099390 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547201,nsv547203,nsv547202 M 17421 0 10 AMY1A,AMY1B,AMY1C esv3440685 1 104036052 104040650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691716 M 185 1 0 AMY1A,AMY1B,AMY1C NA12892 nsv945582 1 104038004 104039108 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571779,nssv2571785,nssv2571783,nssv2571778,nssv2571786,nssv2571780,nssv2571784,nssv2571782,nssv2571781,nssv2571787 M 97 10 0 AMY1A,AMY1B,AMY1C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3362783 1 104038652 104050150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691717 M 185 1 0 AMY1A,AMY1B,AMY1C NA19239 esv3366334 1 104042652 104055150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691718 M 185 1 0 "" NA12892 esv3428532 1 104050852 104053550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691719 M 185 1 0 "" NA19239 nsv946111 1 104055934 104070741 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779506,nssv1779542,nssv1779513,nssv1779528,nssv1779493,nssv1779523,nssv1779507,nssv1779541,nssv1779563,nssv1779558,nssv1779505,nssv1779575,nssv1779514,nssv1779508,nssv1779491,nssv1779549,nssv1779498,nssv1779512,nssv1778871,nssv1779578,nssv1779566,nssv1779517,nssv1779570,nssv1779572,nssv1779500,nssv1779547,nssv1779490,nssv1779580,nssv1779499,nssv1779561,nssv1779571,nssv1779579,nssv1779516,nssv1779554,nssv1779494,nssv1779543,nssv1779567,nssv1779510,nssv1779564,nssv1779559,nssv1779509,nssv1779551,nssv1779497,nssv1779522,nssv1779568,nssv1779545,nssv1779562,nssv1779577,nssv1779496,nssv1779524,nssv1779565,nssv1779530,nssv1779502,nssv1779537,nssv1779492,nssv1779535,nssv1779503,nssv1779520,nssv1779488,nssv1779536,nssv1779569,nssv1779533,nssv1778870,nssv1779529,nssv1779501,nssv1779534,nssv1779489,nssv1779511,nssv1779495,nssv1779532,nssv1779504,nssv1779552,nssv1779531,nssv1779576,nssv1779539,nssv1779556,nssv1779555,nssv1779553,nssv1779540,nssv1779525,nssv1779546,nssv1779573,nssv1779550,nssv1778869,nssv1779527,nssv1779548,nssv1779518,nssv1779521,nssv1779557,nssv1779515,nssv1779581,nssv1779526,nssv1779544,nssv1779574,nssv1779560,nssv1779538,nssv1779519 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3427884 1 104056152 104057250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691721 M 185 1 0 "" NA19239 nsv1007406 1 104058391 104128000 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701130 M 29084 1 0 AMY1A,AMY1B,AMY1C nsv547204 1 104063231 104152300 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720200 M 17421 0 1 AMY1A,AMY1B,AMY1C nsv547205 1 104066009 104100767 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720201 M 17421 0 1 AMY1A,AMY1B,AMY1C esv3336176 1 104076552 104078550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691722 M 185 1 0 "" NA19239 esv3450575 1 104076552 104085150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691723 M 185 1 0 "" NA12892 nsv509402 1 104078976 104083443 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623789 M 4 1 0 "" NA18994 esv3352678 1 104081052 104083450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691724 M 185 1 0 "" NA19239 nsv945583 1 104081366 104084184 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571789,nssv2571792,nssv2571794,nssv2571790,nssv2571793,nssv2571797,nssv2571796,nssv2571791,nssv2571788,nssv2571795 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946112 1 104084184 104110888 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779610,nssv1779640,nssv1779613,nssv1779648,nssv1779661,nssv1779625,nssv1779602,nssv1779650,nssv1779601,nssv1779628,nssv1779611,nssv1779643,nssv1779583,nssv1779620,nssv1779588,nssv1779614,nssv1779598,nssv1779634,nssv1779659,nssv1779651,nssv1779603,nssv1779644,nssv1779597,nssv1779630,nssv1779663,nssv1779649,nssv1779660,nssv1779677,nssv1779591,nssv1779622,nssv1779595,nssv1779645,nssv1779606,nssv1779653,nssv1779590,nssv1779671,nssv1779664,nssv1779607,nssv1779662,nssv1779609,nssv1779666,nssv1779605,nssv1779665,nssv1779632,nssv1779604,nssv1779582,nssv1779596,nssv1779655,nssv1779593,nssv1779647,nssv1779599,nssv1779621,nssv1779667,nssv1779641,nssv1779589,nssv1779676,nssv1779668,nssv1779623,nssv1779587,nssv1779646,nssv1779600,nssv1779635,nssv1779584,nssv1779672,nssv1779592,nssv1779612,nssv1779594,nssv1779627,nssv1779585,nssv1779654,nssv1779586,nssv1779670,nssv1779631,nssv1779638,nssv1779624,nssv1779642,nssv1779652,nssv1779678,nssv1779669,nssv1779636,nssv1779675,nssv1779657,nssv1779619,nssv1779637,nssv1779608,nssv1779656,nssv1779658,nssv1779617,nssv1779618,nssv1779674,nssv1779633,nssv1779673,nssv1779639,nssv1779629,nssv1779615,nssv1779626,nssv1779616 M 97 10 0 AMY1A,AMY1B,AMY1C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3364144 1 104084252 104091450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691725 M 185 1 0 "" NA19239 esv3325833 1 104091952 104098250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691726 M 185 1 0 AMY1A,AMY1B,AMY1C NA12892 esv3363699 1 104092052 104095550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691727 M 185 1 0 AMY1A,AMY1B,AMY1C NA19239 nsv471346 1 104093963 104102833 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548037,nssv548035,nssv548036 M 3 3 0 AMY1A,AMY1B,AMY1C JDW,NA18507,YH nsv482059 1 104093963 104102833 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558420 M 1 1 0 AMY1A,AMY1B,AMY1C KB1 esv3377623 1 104097152 104099150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691728 M 185 1 0 AMY1A,AMY1B,AMY1C NA19239 dgv151e59 1 104099352 104105350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3368815,esv3356736 M 185 2 0 AMY1A,AMY1B,AMY1C NA12892,NA19239 nsv823720 1 104107775 104117764 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1435666,nssv1432219 M 31 2 0 "" NA18566,NA18972 esv3893890 1 104107839 104131400 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779215 M 3017 0 1 "" nsv1014507 1 104108754 104586276 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497738 M 29084 0 1 LOC100129138 nsv10439 1 104111933 104120318 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv15774,nssv14077,nssv21773,nssv14752,nssv14075,nssv21064 M 31 6 0 "" NA10839,NA10847,NA11830,NA18942,NA18972,NA18975 esv32796 1 104112354 104117593 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv98207,essv98849 M 51 2 0 "" 21606,21772 nsv462805 1 104113235 104177689 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538893 M 1557 0 1 "" HGDP00580 nsv470730 1 104113235 104185498 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547759,nssv547760 M 443 0 2 "" HGDP00948,HGDP01216 nsv547206 1 104119937 104256030 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720202 M 17421 0 1 "" nsv10450 1 104134641 104143145 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16106 M 31 0 1 "" NA19007 nsv547207 1 104135740 104221353 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173079 M 17421 0 1 "" HGDP00988 nsv10461 1 104203626 104224582 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv14427 M 31 0 1 "" NA19132 nsv523805 1 104238397 104241773 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699634 M 2026 1 0 "" esv2541656 1 104244064 104245694 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5219849 M 1 0 1 "" NA18507 esv6018 1 104244494 104245482 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28459 M 1 0 0 "" esv2249901 1 104244525 104245424 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4661207 M 1 0 1 "" NA18507 dgv59n67 1 104244674 104245258 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823731,nsv823742 M 31 0 26 "" AK10,AK12,AK16,AK18,AK2,AK20,AK4,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18947,NA18949,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv820709 1 104244674 104245258 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420458 M 1 0 1 "" NA10851 esv994122 1 104244722 104245247 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571601 M 3 0 1 "" HuRef esv21648 1 104244763 104245258 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19059 M 40 36 0 "" NA06985,NA07037,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12287,NA12414,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv547208 1 104244787 104245231 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720205,nssv720203,nssv720204 M 17421 0 3 "" nsv547209 1 104244787 104246839 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720206 M 17421 0 1 "" nsv480787 1 104246162 104246162 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014443 M 9 0 0 "" esv2606135 1 104252518 104253862 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5327994 M 1 0 1 "" NA18507 esv2294842 1 104252836 104253356 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4621360 M 1 0 1 "" NA18507 nsv823753 1 104252978 104253799 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434179 M 31 1 0 "" NA18570 esv2555161 1 104253029 104253182 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5191109 M 1 0 1 "" NA18507 esv3893912 1 104270731 104892261 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25791300 M 3017 1 0 LOC100129138 nsv2188 1 104274099 104294899 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5742,nssv4447,nssv3023 M 9 3 0 "" NA12878,NA18555,NA19129 nsv509413 1 104278629 104317088 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619809,nssv623791,nssv621098 M 4 3 0 "" NA10860,NA15510,NA18994 esv1009790 1 104282357 104282949 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564023 M 3 1 0 "" HuRef esv3376367 1 104282378 104282378 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653202,essv8653200,essv8653201 M 185 3 0 "" NA12878,NA12891,NA12892 nsv1010903 1 104284886 105270464 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493364 M 29084 0 1 LOC100129138,MIR548H3 esv3387551 1 104294507 104294583 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900561,essv8900562,essv8900563 M 185 3 0 "" NA18907,NA19108,NA19138 esv3382159 1 104294538 104294556 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673727 M 185 1 0 "" NA19239 esv3308881 1 104294543 104294544 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838419 M 185 1 0 "" NA12891 nsv471946 1 104321910 104321910 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016571 M 9 1 0 "" NA18555 dgv230n100 1 104347560 104476787 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002477,nsv1002973,nsv999512,nsv1014933,nsv1005132 M 29084 5 0 LOC100129138 dgv231n100 1 104365021 104459395 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008275,nsv1006914,nsv1000500 M 29084 0 3 LOC100129138 esv3385689 1 104375982 104376001 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595902 M 185 1 0 "" NA12872 esv1002516 1 104375990 104375990 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581351 M 3 1 0 "" HuRef esv3307676 1 104375990 104375991 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7805866,essv7834440,essv7791513,essv7776361,essv7831853,essv7795675,essv7825490,essv7822057,essv7783327,essv7799297,essv7777706,essv7802292,essv7810324,essv7772504,essv7773432,essv7771975,essv7810843,essv7803151,essv7795243,essv7787602,essv7781324,essv7813107,essv7814473,essv7783867,essv7771113,essv7797616,essv7820056,essv7809240,essv7778689,essv7793896,essv7835403,essv7815087,essv7817738,essv7809711,essv7813911,essv7803653,essv7784207,essv7806681,essv7790982,essv7784737,essv7814101,essv7819552,essv7823742,essv7820533,essv7792718 M 185 45 0 "" NA07037,NA07346,NA07357,NA10851,NA11829,NA11831,NA11894,NA11919,NA11992,NA12003,NA12006,NA12045,NA12144,NA12154,NA12249,NA12489,NA12716,NA12750,NA12751,NA12761,NA12776,NA12828,NA12872,NA12874,NA18505,NA18516,NA18522,NA18547,NA18563,NA18564,NA18576,NA18582,NA18603,NA18638,NA18856,NA18861,NA18943,NA18956,NA18960,NA18961,NA19093,NA19108,NA19114,NA19138,NA19257 esv3354586 1 104375990 104376004 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900583,essv8900602,essv8900599,essv8900594,essv8900588,essv8900585,essv8900589,essv8900565,essv8900584,essv8900566,essv8900587,essv8900593,essv8900595,essv8900574,essv8900610,essv8900578,essv8900601,essv8900571,essv8900573,essv8900596,essv8900577,essv8900579,essv8900598,essv8900582,essv8900591,essv8900572,essv8900586,essv8900604,essv8900580,essv8900609,essv8900567,essv8900607,essv8900608,essv8900569,essv8900606,essv8900600,essv8900605,essv8900575,essv8900568,essv8900564,essv8900576,essv8900597,essv8900590 M 185 43 0 "" NA07037,NA07346,NA07357,NA10851,NA11829,NA11831,NA11894,NA11919,NA11992,NA12003,NA12006,NA12045,NA12144,NA12154,NA12249,NA12489,NA12716,NA12750,NA12751,NA12761,NA12776,NA12828,NA18505,NA18516,NA18522,NA18547,NA18563,NA18564,NA18576,NA18582,NA18603,NA18638,NA18856,NA18861,NA18943,NA18956,NA18960,NA18961,NA19093,NA19108,NA19114,NA19138,NA19257 nsv508029 1 104376854 104382854 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621474,nssv618502 M 4 0 0 "" CHM,NA15510 nsv2199 1 104394362 104407227 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5744 M 9 1 0 "" NA19129 nsv435907 1 104426511 104431824 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466184 M 2 0 1 "" NA15510 esv27825 1 104470632 104471609 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18725,esv14076 M 40 33 0 "" NA06985,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18508,NA18511,NA18517,NA18523,NA18861,NA18907,NA18909,NA19099,NA19108,NA19129,NA19147,NA19190,NA19225,NA19257 nsv820869 1 104470632 104471696 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420469 M 1 0 1 "" NA10851 esv999353 1 104490960 104500958 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564827 M 3 0 1 "" HuRef esv23471 1 104508146 104509480 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16510 M 40 0 1 "" NA19114 nsv523600 1 104541528 104582290 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699393 M 2026 0 1 "" nsv823764 1 104592544 104593478 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431828 M 31 1 0 "" AK20 esv2602228 1 104593292 104593432 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5292236 M 1 0 1 "" NA18507 esv2762169 1 104599997 104600376 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005724 M 1109 0 1 "" RW_0123 esv28335 1 104610791 104611478 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20828 M 40 0 1 "" NA19147 esv2762170 1 104619223 105213119 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005725 M 1109 0 1 MIR548H3 RW_0046 nsv508030 1 104649781 104655781 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621475 M 4 0 0 "" NA15510 esv2602994 1 104669833 104673123 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5306441 M 1 0 1 "" NA18507 esv2253586 1 104670729 104673066 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4550739 M 1 0 1 "" NA18507 nsv462827 1 104683804 104699371 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538912 M 1557 1 0 "" 1788485590_A nsv547210 1 104683804 104699371 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173080 M 17421 1 0 "" 1788485590_A nsv462840 1 104691609 104712849 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538923 M 1557 0 1 "" HGDP00925 nsv547211 1 104691609 104712849 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173081 M 17421 0 1 "" HGDP00925 dgv446n54 1 104691609 104755888 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547212,nsv547214,nsv547213 M 17421 0 3 "" esv2116318 1 104693320 104693694 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4573403 M 1 0 1 "" NA18507 esv1020604 1 104693543 104693592 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4284074 M 2 0 1 "" HuRef dgv447n54 1 104699371 104788939 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547216,nsv547215 M 17421 0 2 "" esv3893901 1 104732009 104798994 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25793032,essv25792257,essv25787858,essv25788293 M 3017 4 0 "" esv3302948 1 104733630 104733746 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7734142,essv7735782,essv7736700,essv7733352,essv7736792,essv7739126,essv7736707,essv7732772,essv7736862,essv7732158,essv7733262,essv7733999,essv7732857 M 185 13 0 "" NA10851,NA11995,NA12004,NA18507,NA18582,NA18603,NA18916,NA18945,NA18948,NA19099,NA19114,NA19138,NA19147 nsv528566 1 104746373 104828920 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705185 M 2026 0 1 "" nsv1009719 1 104746588 104830032 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492813,nssv3486063 M 29084 0 2 "" nsv519539 1 104793173 104811160 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696908 M 2026 1 0 "" esv3309391 1 104829666 104829667 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837377,essv7838717 M 185 2 0 "" NA19238,NA19240 esv3339066 1 104829704 104829775 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673729,essv8673728 M 185 2 0 "" NA19239,NA19240 esv3305086 1 104829739 104829740 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7753606,essv7762281,essv7745232,essv7748213,essv7750315,essv7757532,essv7746915,essv7759106,essv7756022,essv7751538,essv7745386,essv7756895,essv7755704,essv7744199,essv7747854,essv7760160,essv7746079,essv7752617,essv7751745,essv7744439,essv7747480,essv7760475,essv7760925 M 185 23 0 "" NA07037,NA11831,NA11881,NA11894,NA11920,NA12044,NA12749,NA18489,NA18501,NA18507,NA18508,NA18510,NA18564,NA18573,NA18959,NA19099,NA19102,NA19108,NA19138,NA19147,NA19225,NA19239,NA19240 esv3373009 1 104829743 104829754 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900632,essv8900613,essv8900623,essv8900633,essv8900626,essv8900620,essv8900616,essv8900628,essv8900631,essv8900621,essv8900622,essv8900624,essv8900627,essv8900615,essv8900617,essv8900618,essv8900629,essv8900630,essv8900619,essv8900612,essv8900611 M 185 21 0 "" NA07037,NA11831,NA11881,NA11894,NA11920,NA12044,NA12749,NA18489,NA18501,NA18507,NA18508,NA18510,NA18564,NA18573,NA18959,NA19099,NA19102,NA19108,NA19138,NA19147,NA19225 nsv1011577 1 104852525 104916830 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701133 M 29084 0 1 "" esv3306018 1 104855592 104855593 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7833105,essv7802325,essv7779717,essv7800117,essv7828036,essv7827372,essv7776938,essv7777483,essv7825282,essv7789248,essv7798671,essv7813471,essv7810147,essv7788910,essv7805935,essv7774349,essv7828947,essv7785562,essv7823428,essv7772445,essv7810734,essv7794082,essv7830983,essv7833346,essv7796619,essv7811539,essv7799797,essv7827749,essv7825665,essv7772061,essv7832718,essv7834995,essv7805485,essv7802722,essv7804169,essv7829333,essv7791523,essv7784419,essv7831932,essv7812066,essv7773207,essv7821333,essv7782300,essv7793052,essv7831642,essv7785009,essv7778026,essv7807711,essv7814323,essv7818870,essv7810826,essv7818585,essv7830690,essv7800543,essv7786627,essv7806561,essv7835987,essv7824461,essv7804325,essv7787973,essv7796406,essv7824052,essv7820967,essv7815171,essv7810044,essv7791930,essv7783199,essv7793328,essv7819557,essv7780383,essv7772890,essv7794780,essv7792679,essv7808153,essv7803571,essv7775842,essv7817376,essv7826983,essv7774901,essv7826214 M 185 80 0 "" NA06986,NA07037,NA07051,NA10851,NA11830,NA11831,NA11881,NA11894,NA11918,NA11920,NA11993,NA11994,NA12004,NA12043,NA12044,NA12045,NA12144,NA12489,NA12776,NA12812,NA12872,NA12892,NA18489,NA18501,NA18505,NA18507,NA18508,NA18511,NA18519,NA18523,NA18532,NA18537,NA18542,NA18550,NA18552,NA18555,NA18558,NA18563,NA18564,NA18571,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18638,NA18858,NA18861,NA18907,NA18940,NA18943,NA18945,NA18947,NA18951,NA18956,NA18959,NA18960,NA18964,NA18965,NA18973,NA18980,NA19099,NA19102,NA19108,NA19114,NA19138,NA19141,NA19147,NA19172,NA19225,NA19238,NA19239,NA19240,NA19257 esv3308277 1 104855594 104855595 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837146 M 185 1 0 "" NA19239 esv3426567 1 104855596 104855615 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595913,essv9595924 M 185 2 0 "" NA12812,NA12872 nsv508437 1 104858332 104881355 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622772 M 4 0 1 "" NA18994 esv3304801 1 104871756 104871757 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7753543,essv7760921,essv7758576,essv7760436,essv7755822,essv7757172,essv7755545,essv7752501,essv7754014,essv7759983,essv7745564,essv7743531,essv7756963,essv7758344,essv7744163,essv7748304,essv7759060 M 185 17 0 "" NA07037,NA11831,NA11920,NA12045,NA12489,NA18501,NA18508,NA18510,NA18522,NA18564,NA18573,NA18853,NA18909,NA19099,NA19102,NA19108,NA19147 esv3356998 1 104871760 104871770 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900717,essv8900721,essv8900722,essv8900727,essv8900732,essv8900723,essv8900718,essv8900724,essv8900733,essv8900730,essv8900720,essv8900719,essv8900728,essv8900731,essv8900729,essv8900716,essv8900726 M 185 17 0 "" NA07037,NA11831,NA11920,NA12045,NA12489,NA18501,NA18508,NA18510,NA18522,NA18564,NA18573,NA18853,NA18909,NA19099,NA19102,NA19108,NA19147 nsv823775 1 104880961 104881509 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436350 M 31 0 1 "" NA18542 nsv547217 1 104890919 104892261 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720212 M 17421 0 1 "" dgv232n100 1 104905881 104977514 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999490,nsv1013052,nsv1004836 M 29084 0 5 "" nsv547218 1 104912966 104936185 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720213 M 17421 0 1 "" esv3387766 1 104940162 104940172 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900746,essv8900755,essv8900741,essv8900766,essv8900779,essv8900735,essv8900740,essv8900776,essv8900749,essv8900771,essv8900768,essv8900759,essv8900737,essv8900743,essv8900750,essv8900767,essv8900764,essv8900748,essv8900753,essv8900765,essv8900770,essv8900744,essv8900738,essv8900774,essv8900778,essv8900762,essv8900772,essv8900742,essv8900757,essv8900760,essv8900734,essv8900739,essv8900752,essv8900773,essv8900775,essv8900756,essv8900751,essv8900761,essv8900754,essv8900745,essv8900763,essv8900777,essv8900782 M 185 43 0 "" NA06986,NA07357,NA11920,NA12144,NA12414,NA12763,NA18523,NA18526,NA18532,NA18537,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18563,NA18564,NA18566,NA18572,NA18576,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18638,NA18940,NA18943,NA18945,NA18948,NA18949,NA18951,NA18953,NA18956,NA18959,NA18973,NA19093,NA19108,NA19137 esv3306489 1 104940163 104940164 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7750025,essv7759375,essv7747644,essv7757892,essv7760946,essv7743698,essv7752185,essv7757338,essv7748774,essv7757566,essv7756580,essv7762647,essv7745276,essv7748643,essv7755406,essv7746298,essv7751610,essv7744994,essv7750795,essv7755179,essv7761938,essv7747351,essv7758671,essv7742088,essv7745745,essv7751883,essv7740330,essv7740785,essv7749679,essv7745605,essv7740881,essv7748099,essv7761167,essv7745133,essv7748941,essv7759698,essv7756706,essv7741909,essv7755228,essv7749961,essv7757997,essv7753266,essv7756986 M 185 43 0 "" NA06986,NA07357,NA11920,NA12144,NA12414,NA12763,NA18523,NA18526,NA18532,NA18537,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18563,NA18564,NA18566,NA18572,NA18576,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18638,NA18940,NA18943,NA18945,NA18948,NA18949,NA18951,NA18953,NA18956,NA18959,NA18973,NA19093,NA19108,NA19137 nsv547219 1 104991234 105075588 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720214 M 17421 0 1 "" nsv1002363 1 104993628 105026853 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497532,nssv3492513 M 29084 0 2 "" esv3388718 1 105005052 105005550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691732 M 185 1 0 "" NA19238 esv997609 1 105020082 105020986 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587086 M 3 0 1 "" HuRef esv1121462 1 105032634 105032634 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3660275 M 2 1 0 "" HuRef nsv462873 1 105037300 105088277 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538947 M 1557 0 1 "" HGDP01416 nsv547220 1 105037300 105088277 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173082 M 17421 0 1 "" HGDP01416 nsv946113 1 105049575 105054571 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1779696,nssv1779714,nssv1779684,nssv1779723,nssv1779763,nssv1779745,nssv1779708,nssv1779741,nssv1779699,nssv1779721,nssv1779695,nssv1779712,nssv1779685,nssv1779734,nssv1779680,nssv1779711,nssv1779765,nssv1779724,nssv1779707,nssv1779726,nssv1779698,nssv1779722,nssv1779687,nssv1779713,nssv1779760,nssv1779736,nssv1779681,nssv1779751,nssv1779703,nssv1779731,nssv1779694,nssv1779766,nssv1779710,nssv1779720,nssv1779700,nssv1779775,nssv1779690,nssv1779744,nssv1779756,nssv1779729,nssv1779688,nssv1779772,nssv1779758,nssv1779717,nssv1779693,nssv1779727,nssv1779762,nssv1779730,nssv1779761,nssv1779737,nssv1779692,nssv1779747,nssv1779759,nssv1779752,nssv1779689,nssv1779715,nssv1779697,nssv1779719,nssv1779682,nssv1779774,nssv1779757,nssv1779743,nssv1779686,nssv1779725,nssv1779764,nssv1779750,nssv1779683,nssv1779748,nssv1779701,nssv1779749,nssv1779691,nssv1779728,nssv1779754,nssv1779735,nssv1779746,nssv1779702,nssv1779732,nssv1779706,nssv1779742,nssv1779704,nssv1779679,nssv1779709,nssv1779739,nssv1779767,nssv1779770,nssv1779733,nssv1779718,nssv1779771,nssv1779705,nssv1779768,nssv1779773,nssv1779740,nssv1779716,nssv1779753,nssv1779769,nssv1779755,nssv1779738 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508031 1 105054122 105060122 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618503 M 4 0 0 "" CHM nsv820044 1 105055522 105057756 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419406 M 2 0 1 "" AK1 esv8191 1 105056321 105057888 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30632 M 1 0 0 "" nsv511136 1 105056444 105057822 CNV gain Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624710 M 1 1 0 "" 1 dgv448n54 1 105056444 105089957 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547222,nsv547221 M 17421 0 2 "" dgv60n67 1 105056655 105057726 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823786,nsv823797 M 31 0 26 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18547,NA18552,NA18564,NA18566,NA18570,NA18592,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18997,NA18999 esv22724 1 105056873 105057712 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20665 M 40 0 2 "" NA18916,NA19129 esv28027 1 105101788 105102722 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20500 M 40 0 1 "" NA11995 dgv233n100 1 105104234 105187773 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012757,nsv1000257 M 29084 2 0 MIR548H3 nsv462884 1 105114146 105251544 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538954 M 1557 0 1 MIR548H3 NINDS_227 nsv547223 1 105114146 105251544 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173083,nssv720217 M 17421 0 2 MIR548H3 NINDS_227 nsv525274 1 105122765 105166823 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701375 M 2026 1 0 MIR548H3 nsv547224 1 105122765 105182306 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720218 M 17421 1 0 MIR548H3 dgv234n100 1 105123107 105187773 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007520,nsv1002348,nsv1006810,nsv1000236,nsv999049 M 29084 5 0 MIR548H3 nsv1007532 1 105123107 105195738 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701137 M 29084 0 1 MIR548H3 esv2761372 1 105123119 105187785 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6991489 M 1109 1 0 MIR548H3 SW_1188 nsv2210 1 105140814 105174758 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1284 M 9 1 0 MIR548H3 NA19240 nsv830926 1 105153655 105235551 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1448484,nssv1448473 M 95 1 1 MIR548H3 nsv547225 1 105194470 105225678 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720219 M 17421 0 1 MIR548H3 nsv830937 1 105215898 105373867 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448495 M 95 1 0 MIR548H3 esv2463295 1 105228948 105230651 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5343139 M 1 0 1 MIR548H3 NA18507 esv6425 1 105229617 105230433 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28866 M 1 0 0 MIR548H3 esv2376593 1 105229633 105230379 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4546824 M 1 0 1 MIR548H3 NA18507 esv3706 1 105229791 105230276 CNV loss Wang_et_al_2008 18987735 Sequencing essv26147 M 1 0 1 MIR548H3 YH nsv160929 1 105229833 105230162 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179507 M 24 MIR548H3 esv1701476 1 105229843 105230173 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3596161 M 2 0 1 MIR548H3 HuRef dgv235n100 1 105259029 105302033 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009380,nsv1012043 M 29084 2 0 MIR548H3 nsv547226 1 105390039 105422292 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720220 M 17421 0 1 MIR548H3 nsv1006105 1 105413865 105598366 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486574 M 29084 1 0 MIR548H3 nsv999717 1 105420413 105499264 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483678 M 29084 1 0 MIR548H3 nsv947438 1 105426485 105430742 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764938 M 97 0 1 MIR548H3 HGDP00456 nsv477123 1 105426618 105426618 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017488 M 9 1 0 MIR548H3 NA18517 esv23726 1 105427846 105432029 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9806 M 40 0 1 MIR548H3 NA18907 nsv462906 1 105439437 105587913 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538965 M 1557 1 0 MIR548H3 1782681378_A nsv547227 1 105439437 105587913 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173084 M 17421 1 0 MIR548H3 1782681378_A esv3893934 1 105439437 105841589 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25792642 M 3017 1 0 MIR548H3 nsv547228 1 105465498 105469500 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720221 M 17421 0 1 MIR548H3 nsv547229 1 105468445 105469921 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720224,nssv720222,nssv720223,nssv720226,nssv720225,nssv720231,nssv720227,nssv720230,nssv720229,nssv720232,nssv720228 M 17421 0 11 MIR548H3 nsv547230 1 105468445 105474646 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720233 M 17421 0 1 MIR548H3 esv24741 1 105469153 105469979 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12014 M 40 38 0 MIR548H3 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv820381 1 105469153 105469979 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420480 M 1 0 1 MIR548H3 NA10851 dgv449n54 1 105469194 105469921 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547235,nsv547231,nsv547232,nsv547234,nsv547233 M 17421 0 86 MIR548H3 nsv2221 1 105493030 105523475 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2246 M 9 1 0 "" NA18555 nsv462917 1 105505574 105618617 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538975 M 1557 1 0 "" HGDP00279 nsv547236 1 105505574 105618617 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173085 M 17421 1 0 "" HGDP00279 esv3417490 1 105512711 105512725 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863739 M 185 1 0 "" NA12005 nsv462928 1 105526722 105587169 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538985 M 1557 0 1 "" NINDS_166 nsv547237 1 105526722 105587169 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173086 M 17421 0 1 "" NINDS_166 esv3893945 1 105581136 105627084 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25778574 M 3017 0 1 "" nsv508448 1 105600920 105627107 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622773 M 4 0 1 "" NA18994 nsv547238 1 105604110 105783414 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720320 M 17421 0 1 "" dgv450n54 1 105610565 105751839 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547239,nsv547240 M 17421 0 3 "" NINDS_117,NINDS_125 dgv26n27 1 105627084 105751839 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv462939,nsv462951 M 1557 0 2 "" NINDS_117,NINDS_125 nsv441703 1 105634380 105641635 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656697,nssv1656695,nssv1656698,nssv1656696 M 270 0 4 "" NA18576,NA18612,NA18943,NA18976 nsv819197 1 105635582 105647162 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418613 M 2 0 1 "" AK1 nsv514910 1 105636992 105641584 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2847549,nssv2847491,nssv2847524,nssv2847492,nssv2847535,nssv2847493,nssv2847540,nssv2847494,nssv2847532,nssv2847495,nssv2847526,nssv2846798,nssv2847509,nssv2847443,nssv2847536,nssv2847457,nssv2847516,nssv2846898,nssv2847501,nssv2847376,nssv2847546,nssv2845854,nssv2847533,nssv2845774,nssv2847544,nssv2845807,nssv2847512,nssv2846914,nssv2847539,nssv2847355,nssv2847525,nssv2847313,nssv2847527,nssv2846863,nssv2847542,nssv2845796,nssv2847506,nssv2845778,nssv2847529,nssv2847496,nssv2847507,nssv2847435,nssv2847537,nssv2847458,nssv2847505,nssv2847393,nssv2847548,nssv2846802,nssv2847515,nssv2847324,nssv2847530,nssv2845795,nssv2847545,nssv2846907,nssv2847514,nssv2847370,nssv2847541,nssv2847345,nssv2847499,nssv2847440,nssv2847522,nssv2847459,nssv2847534,nssv2847461,nssv2847547,nssv2847369,nssv2847510,nssv2847359,nssv2847517,nssv2847354,nssv2847498,nssv2847464,nssv2847503,nssv2847305,nssv2847518,nssv2847399,nssv2847500,nssv2847302,nssv2847543,nssv2846877,nssv2847502,nssv2846840,nssv2847528,nssv2847315,nssv2847538,nssv2847449,nssv2847521,nssv2846886,nssv2847531,nssv2847339,nssv2847520,nssv2847481,nssv2847508,nssv2847417,nssv2847523,nssv2847295,nssv2847511,nssv2845822,nssv2847519,nssv2847409,nssv2847504,nssv2847292,nssv2847513,nssv2847432,nssv2845855,nssv2846869,nssv2846911,nssv2845793,nssv2846919,nssv2845858,nssv2846828,nssv2847353,nssv2847447,nssv2847401,nssv2845816,nssv2846825,nssv2846822,nssv2847460,nssv2846880,nssv2847382,nssv2846867,nssv2847309,nssv2847488,nssv2847450,nssv2845867,nssv2846805,nssv2846900,nssv2845787,nssv2846826,nssv2845836,nssv2847371,nssv2847347,nssv2847321,nssv2846888,nssv2847408,nssv2847455,nssv2845839,nssv2847299,nssv2846864,nssv2846842,nssv2847293,nssv2846851,nssv2845823,nssv2846921,nssv2845853,nssv2847312,nssv2845820,nssv2847451,nssv2847413,nssv2846800,nssv2846916,nssv2847476,nssv2845775,nssv2845821,nssv2845797,nssv2845831,nssv2846910,nssv2847482,nssv2847373,nssv2846892,nssv2845792,nssv2846831,nssv2845814,nssv2846878,nssv2845817,nssv2847380,nssv2847368,nssv2847392,nssv2847306,nssv2847442,nssv2847310,nssv2845806,nssv2845830,nssv2846875,nssv2847378,nssv2846846,nssv2846807,nssv2845869,nssv2847298,nssv2847325,nssv2846809,nssv2847296,nssv2846899,nssv2847388,nssv2846890,nssv2847469,nssv2847389,nssv2847314,nssv2847360,nssv2847383,nssv2846917,nssv2845841,nssv2846829,nssv2847400,nssv2845802,nssv2847330,nssv2847419,nssv2845803,nssv2847367,nssv2847402,nssv2847433,nssv2847420,nssv2847414,nssv2845856,nssv2845872,nssv2847303,nssv2847427,nssv2847377,nssv2847424,nssv2846836,nssv2846814,nssv2846915,nssv2845873,nssv2845781,nssv2846827,nssv2845857,nssv2846882,nssv2846908,nssv2845844,nssv2846873,nssv2846838,nssv2847412,nssv2847327,nssv2846858,nssv2847479,nssv2845777,nssv2847475,nssv2847332,nssv2847462,nssv2845861,nssv2846839,nssv2847430,nssv2845811,nssv2845833,nssv2845826,nssv2847328,nssv2847374,nssv2847352,nssv2847340,nssv2847456,nssv2847320,nssv2847390,nssv2847487,nssv2846815,nssv2845808,nssv2846902,nssv2846893,nssv2845832,nssv2847357,nssv2847394,nssv2845776,nssv2845860,nssv2847317,nssv2845801,nssv2847434,nssv2847301,nssv2847350,nssv2847486,nssv2846903,nssv2846810,nssv2845825,nssv2847405,nssv2845804,nssv2846808,nssv2846904,nssv2847343,nssv2846901,nssv2846837,nssv2847466,nssv2846883,nssv2845800,nssv2846859,nssv2847336,nssv2845794,nssv2846830,nssv2846874,nssv2846889,nssv2847342,nssv2847437,nssv2846862,nssv2846812,nssv2845786,nssv2846918,nssv2845812,nssv2847415,nssv2845827,nssv2847344,nssv2847384,nssv2847356,nssv2845829,nssv2847489,nssv2846895,nssv2846821,nssv2847467,nssv2847335,nssv2845838,nssv2845848,nssv2846833,nssv2845865,nssv2845868,nssv2845840,nssv2846909,nssv2845788,nssv2847480,nssv2846841,nssv2846861,nssv2847396,nssv2847307,nssv2845779,nssv2845813,nssv2846795,nssv2847348,nssv2846819,nssv2846817,nssv2845846,nssv2847331,nssv2847436,nssv2845835,nssv2847346,nssv2846843,nssv2847407,nssv2846835,nssv2847398,nssv2846856,nssv2847387,nssv2846804,nssv2846887,nssv2847422,nssv2845798,nssv2845852,nssv2846897,nssv2846845,nssv2847490,nssv2846906,nssv2847406,nssv2846885,nssv2846813,nssv2847445,nssv2846865,nssv2845819,nssv2847291,nssv2847418,nssv2846920,nssv2846857,nssv2847395,nssv2846881,nssv2847364,nssv2845845,nssv2847497,nssv2846894,nssv2847319,nssv2847334,nssv2847381,nssv2847448,nssv2847341,nssv2846834,nssv2847441,nssv2847316,nssv2845805,nssv2845773,nssv2847300,nssv2847465,nssv2847403,nssv2847375,nssv2846868,nssv2845871,nssv2846832,nssv2847453,nssv2845799,nssv2847472,nssv2845834,nssv2847431,nssv2847439,nssv2846855,nssv2846803,nssv2847351,nssv2846847,nssv2847463,nssv2847365,nssv2846850,nssv2846818,nssv2847423,nssv2847429,nssv2846823,nssv2847468,nssv2847452,nssv2845785,nssv2847484,nssv2847438,nssv2847470,nssv2847444,nssv2845810,nssv2846871,nssv2847410,nssv2845851,nssv2845782,nssv2845780,nssv2847358,nssv2845863,nssv2845824,nssv2846811,nssv2847318,nssv2846912,nssv2846913,nssv2847323,nssv2847428,nssv2845849,nssv2847421,nssv2845809,nssv2847473,nssv2847391,nssv2847366,nssv2846876,nssv2845842,nssv2845815,nssv2846799,nssv2847474,nssv2846891,nssv2847372,nssv2845864,nssv2847322,nssv2847311,nssv2847386,nssv2846816,nssv2846860,nssv2846872,nssv2846824,nssv2847483,nssv2847308,nssv2847477,nssv2846866,nssv2847337,nssv2847411,nssv2847416,nssv2847297,nssv2846797,nssv2847363,nssv2846852,nssv2846801,nssv2847294,nssv2845862,nssv2847349,nssv2847426,nssv2845837,nssv2847338,nssv2847361,nssv2846848,nssv2845850,nssv2845843,nssv2847454,nssv2846884,nssv2847471,nssv2846820,nssv2846905,nssv2846879,nssv2847446,nssv2847425,nssv2846854,nssv2846853,nssv2845784,nssv2845789,nssv2845870,nssv2845859,nssv2847333,nssv2847329,nssv2847304,nssv2846896,nssv2847397,nssv2845828,nssv2846806,nssv2845847,nssv2846849,nssv2847362,nssv2845783,nssv2845818,nssv2847379,nssv2845874,nssv2847485,nssv2846796,nssv2847385,nssv2847326,nssv2847404,nssv2845866,nssv2847478,nssv2846870,nssv2845790,nssv2846844,nssv2845791 M 2366 0 488 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv830948 1 105651765 105814712 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448506,nssv1448518 M 95 2 0 "" esv3407172 1 105659294 105659320 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900851,essv8900848,essv8900845,essv8900850,essv8900854,essv8900849,essv8900852,essv8900853,essv8900855,essv8900846 M 185 10 0 "" NA12044,NA18486,NA18502,NA18510,NA18519,NA18520,NA18907,NA19147,NA19210,NA19225 esv3304270 1 105659304 105659305 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7744243,essv7747941,essv7742515,essv7741257,essv7742141,essv7763339,essv7744340,essv7745388,essv7741717,essv7747538 M 185 10 0 "" NA12044,NA18486,NA18502,NA18510,NA18519,NA18520,NA18907,NA19147,NA19210,NA19225 nsv999062 1 105666407 105727011 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492830,nssv3499398 M 29084 0 2 "" esv2438647 1 105667530 105669000 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5287613 M 1 0 1 "" NA18507 esv2155396 1 105668130 105668748 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4841978 M 1 0 1 "" NA18507 esv8229 1 105668160 105668705 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30670 M 1 0 0 "" esv4472 1 105668275 105668783 CNV loss Wang_et_al_2008 18987735 Sequencing essv26913 M 1 0 1 "" YH esv1184395 1 105668306 105668580 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3812611 M 2 0 1 "" HuRef nsv1004371 1 105678322 105732017 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488302 M 29084 1 0 "" nsv428168 1 105728511 106159767 CNV loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450853 M 62 0 1 "" NA19108 nsv818300 1 105755519 105783414 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417812,nssv1417811 M 112 2 0 "" NA18852,NA18853 nsv547241 1 105755519 105924364 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720322 M 17421 1 0 "" dgv236n100 1 105770815 105893869 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006804,nsv1002879,nsv1014836 M 29084 5 0 "" nsv10472 1 105772203 105796522 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv14757 M 31 0 1 "" NA19132 esv3322692 1 105775523 105775539 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900856,essv8900861,essv8900860,essv8900862,essv8900857,essv8900859 M 185 6 0 "" NA18502,NA18510,NA18519,NA18522,NA19147,NA19225 esv3303871 1 105775528 105775529 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758298,essv7745472,essv7741588,essv7747796,essv7742115,essv7744160 M 185 6 0 "" NA18502,NA18510,NA18519,NA18522,NA19147,NA19225 nsv1012477 1 105776033 106045454 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701139 M 29084 1 0 "" nsv1013370 1 105786203 105823138 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497165 M 29084 0 1 "" nsv471688 1 105789055 105959460 CNV loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550647 M 48 0 1 "" NA17017 nsv547242 1 105799704 105839118 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720323 M 17421 0 1 "" dgv237n100 1 105801393 105830601 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002762,nsv1000449,nsv1001934 M 29084 3 0 "" dgv238n100 1 105802454 105825648 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999878,nsv1013344,nsv1011617,nsv1012368,nsv1012114 M 29084 0 10 "" esv3584592 1 105803129 105823898 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838368,essv9838369 M 34 0 2 "" OA018b,OA054 nsv1013675 1 105803667 105823886 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484215,nssv3484370,nssv3489519,nssv3500916,nssv3488765,nssv3489270,nssv3489436,nssv3498247 M 29084 5 3 "" nsv2232 1 105806170 105864416 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1293,nssv2256,nssv2257 M 9 0 2 "" NA18555,NA19240 nsv547243 1 105807164 105827431 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720324 M 17421 0 1 "" nsv515547 1 105808664 105882130 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv663873,nssv686774,nssv669678 M 2026 3 0 "" dgv451n54 1 105811712 105824352 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547245,nsv547244,nsv547248,nsv547246 M 17421 4 0 "" nsv547247 1 105813311 105822922 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720329,nssv720328 M 17421 1 1 "" dgv452n54 1 105813311 105827431 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547250,nsv547249 M 17421 0 2 "" dgv239n100 1 105814265 105825601 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009552,nsv1007814 M 29084 0 2 "" dgv240n100 1 105814265 105826321 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012998,nsv1012566,nsv1013152,nsv1000635,nsv1004720 M 29084 56 29 "" dgv241n100 1 105814265 105832112 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998703,nsv1014540 M 29084 4 4 "" dgv242n100 1 105814265 105832112 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1015040,nsv1005973 M 29084 6 0 "" dgv243n100 1 105814265 105893869 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011361,nsv1008124,nsv999114,nsv998648,nsv1002237,nsv1003865,nsv1004657,nsv1013993,nsv997885,nsv1004251,nsv1008508 M 29084 33 0 "" esv2764204 1 105814277 105823898 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005791,essv7005735,essv7005780,essv7005839,essv7005807,essv7005806,essv7005741,essv7005782,essv7005832,essv7005727,essv7005749,essv7005802,essv7005754,essv7005827,essv7005772,essv7005755,essv7005737,essv7005835,essv7005843,essv7005743,essv7005783,essv7005788,essv7005840,essv7005750,essv7005757,essv7005752,essv7005849,essv7005732,essv7005747,essv7005828,essv7005798,essv7005746,essv7005826,essv7005786,essv7005758,essv7005814,essv7005804,essv7005770,essv7005790,essv7005808,essv7005763,essv7005799,essv7005836,essv7005730,essv7005736,essv7005734,essv7005766,essv7005774,essv7005793,essv7005759,essv7005784,essv7005813,essv7005738,essv7005781,essv7005825,essv7005841,essv7005787,essv7005777,essv7005794,essv7005776,essv7005837,essv7005851,essv7005728,essv7005753,essv7005795,essv7005831,essv7005792,essv7005773,essv7005812,essv7005818,essv7005845,essv7005760,essv7005765,essv7005739,essv7005834,essv7005785,essv7005775,essv7005731,essv7005819,essv7005846,essv7005852,essv7005740,essv7005850,essv7005729,essv7005815,essv7005848,essv7005742,essv7005761,essv7005726,essv7005847,essv7005809,essv7005748,essv7005805,essv7005764,essv7005810,essv7005803,essv7005842,essv7005829,essv7005821,essv7005751,essv7005824,essv7005762,essv7005796,essv7005817,essv7005797,essv7005853,essv7005768,essv7005769,essv7005801,essv7005823,essv7005816,essv7005838,essv7005830,essv7005779,essv7005771,essv7005820 M 1109 0 116 "" RW_0002,RW_0006,RW_0008,RW_0011,RW_0020,RW_0029,RW_0032,RW_0034,RW_0039,RW_0043,RW_0047,RW_0054,RW_0058,RW_0060,RW_0067,RW_0075,RW_0077,RW_0084,RW_0092,RW_0094,RW_0095,RW_0096,RW_0099,RW_0100,RW_0104,RW_0105,RW_0106,RW_0117,RW_0122,RW_0126,RW_0132,RW_0134,RW_0140,RW_0144,RW_0146,RW_0154,RW_0161,RW_0169,RW_0173,RW_0180,RW_0181,RW_0185,RW_0189,RW_0190,RW_0201,RW_0203,RW_0205,RW_0207,RW_0215,RW_0216,RW_0223,RW_0231,RW_0233,RW_0249,RW_0250,RW_0252,RW_0255,RW_0258,RW_0263,RW_0268,RW_0277,RW_0280,RW_0281,RW_0284,RW_0297,RW_0315,RW_0319,RW_0323,RW_0327,RW_0328,RW_0329,RW_0330,RW_0346,RW_0353,RW_0357,RW_0361,RW_0502,RW_0511,RW_0512,RW_0513,RW_0518,RW_0522,RW_0524,RW_0525,RW_0527,RW_0533,RW_0536,RW_0538,RW_0540,RW_0543,RW_0544,RW_0551,RW_0555,RW_0559,RW_0568,RW_0571,RW_0575,RW_0576,RW_0578,RW_0585,RW_0590,RW_0594,RW_0596,RW_0600,RW_0603,RW_0608,RW_0617,RW_0619,RW_0620,RW_0625,RW_0627,RW_0643,RW_0645,RW_0651,RW_0662,RW_0663 esv2762187 1 105814277 105938436 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6991890,essv6992212,essv6992145,essv6992123,essv6992523,essv6992167,essv6991789,essv6992178,essv6992434,essv6991511,essv6991800,essv6992134,essv6991767,essv6992445,essv6992034,essv6992012,essv6991868,essv6992278,essv6992067,essv6992456,essv6992056,essv6992345,essv6991545,essv6992090,essv6992267,essv6992334,essv6992223,essv6991678,essv6991689,essv6991879,essv6992467,essv6991722,essv6992423,essv6991667,essv6991822,essv6991656,essv6992389,essv6992289,essv6992511,essv6991711,essv6992045,essv6991500,essv6992101,essv6991700,essv6992478,essv6992201,essv6991523,essv6992489,essv6992356,essv6992023,essv6992400,essv6991857,essv6991634,essv6991979,essv6991567,essv6991645,essv6992301,essv6991622,essv6992245,essv6991811,essv6992500,essv6991923,essv6991745,essv6991912,essv6992001,essv6992367,essv6992234,essv6992190,essv6991934,essv6991611,essv6992079,essv6991844,essv6992112,essv6992156,essv6992378,essv6991945,essv6991534,essv6992412,essv6991556,essv6991578,essv6991600,essv6992312,essv6991733,essv6991990,essv6992256,essv6991901,essv6992323,essv6991589,essv6991778,essv6991968,essv6991756,essv6991956,essv6991833 M 1109 4 88 "" SW_0001,SW_0002,SW_0007,SW_0029,SW_0044,SW_0049,SW_0060,SW_0071,SW_0100,SW_0159,SW_0176,SW_0186,SW_0191,SW_0211,SW_0338,SW_0509,SW_0606,SW_0619,SW_0624,SW_0628,SW_0635,SW_0702,SW_0715,SW_0716,SW_0760,SW_0785,SW_0786,SW_0813,SW_0814,SW_0822,SW_0829,SW_0834,SW_0835,SW_0841,SW_0871,SW_0883,SW_1013,SW_1017,SW_1030,SW_1038,SW_1039,SW_1042,SW_1048,SW_1072,SW_1079,SW_1081,SW_1093,SW_1100,SW_1105,SW_1111,SW_1113,SW_1120,SW_1124,SW_1130,SW_1132,SW_1144,SW_1147,SW_1156,SW_1166,SW_1174,SW_1184,SW_1197,SW_1217,SW_1225,SW_1244,SW_1253,SW_1261,SW_1267,SW_1269,SW_1284,SW_1287,SW_1302,SW_1308,SW_1315,SW_1317,SW_1324,SW_1326,SW_1332,SW_1345,SW_1356,SW_1361,SW_1365,SW_1384,SW_1389,SW_1395,SW_1413,SW_1460,SW_1466,SW_1476,SW_1508,SW_1543,SW_1570 nsv1006434 1 105814887 105830601 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488897,nssv3500894,nssv3499987 M 29084 0 3 "" esv2576180 1 105816071 105825129 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5359561 M 1 0 1 "" NA18507 nsv819373 1 105816667 105824965 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419865 M 2 0 1 "" AK1 esv2563802 1 105816767 105825605 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5368456 M 1 0 1 "" NA18507 dgv3n50 1 105816823 105826321 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nsv511133,nsv511708 M 1 0 1 "" 1 esv995806 1 105817122 105825310 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563915 M 3 0 1 "" HuRef esv9304 1 105817147 105825154 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31745 M 1 0 0 "" esv2004929 1 105817189 105825091 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4538822 M 1 0 1 "" NA18507 esv4691 1 105817308 105825002 CNV loss Wang_et_al_2008 18987735 Sequencing essv27132 M 1 0 1 "" YH nsv10483 1 105817322 105825895 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16422,nssv18078,nssv15781,nssv19424,nssv16436,nssv14407,nssv22103,nssv14095,nssv16096,nssv16425,nssv14741,nssv15117,nssv15426,nssv17091,nssv15770,nssv15769,nssv15112,nssv16104,nssv21394,nssv17743,nssv18449 M 31 0 21 "" NA10839,NA10863,NA11830,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19173,NA19240 esv28833 1 105817336 105824920 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19532 M 40 0 24 "" NA06985,NA07045,NA11894,NA11993,NA12004,NA12006,NA12044,NA12239,NA12414,NA15510,NA18502,NA18511,NA18517,NA18858,NA18907,NA18909,NA19099,NA19108,NA19114,NA19147,NA19190,NA19225,NA19240,NA19257 dgv2n47 1 105817337 105824922 CNV loss Kidd_et_al_2010b 21111241 Sequencing nsv498677,nsv498676 M 9 0 2 "" dgv61n67 1 105817666 105824239 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823820,nsv823809 M 31 0 26 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK6,AK8,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973 nsv513995 1 105819528 105824064 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2847571,nssv2847662,nssv2847696,nssv2847599,nssv2847831,nssv2847747,nssv2847588,nssv2847758,nssv2847858,nssv2847572,nssv2847651,nssv2847603,nssv2847789,nssv2847772,nssv2847867,nssv2847710,nssv2847576,nssv2847669,nssv2847660,nssv2847583,nssv2847703,nssv2847753,nssv2847803,nssv2847556,nssv2847672,nssv2847551,nssv2847733,nssv2847582,nssv2847754,nssv2847665,nssv2847601,nssv2847838,nssv2847618,nssv2847819,nssv2847751,nssv2847764,nssv2847633,nssv2847784,nssv2847681,nssv2847639,nssv2847773,nssv2847585,nssv2847836,nssv2847622,nssv2847705,nssv2847701,nssv2847707,nssv2847657,nssv2847641,nssv2847851,nssv2847808,nssv2847775,nssv2847728,nssv2847656,nssv2847613,nssv2847690,nssv2847568,nssv2847668,nssv2847645,nssv2847560,nssv2847553,nssv2847829,nssv2847616,nssv2847801,nssv2847762,nssv2847790,nssv2847868,nssv2847634,nssv2847581,nssv2847763,nssv2847558,nssv2847611,nssv2847730,nssv2847687,nssv2847856,nssv2847844,nssv2847604,nssv2847674,nssv2847800,nssv2847636,nssv2847704,nssv2847745,nssv2847768,nssv2847590,nssv2847824,nssv2847708,nssv2847642,nssv2847785,nssv2847718,nssv2847861,nssv2847715,nssv2847697,nssv2847850,nssv2847663,nssv2847738,nssv2847749,nssv2847695,nssv2847630,nssv2847646,nssv2847743,nssv2847557,nssv2847640,nssv2847619,nssv2847682,nssv2847872,nssv2847691,nssv2847870,nssv2847869,nssv2847832,nssv2847698,nssv2847740,nssv2847659,nssv2847820,nssv2847817,nssv2847578,nssv2847580,nssv2847752,nssv2847593,nssv2847847,nssv2847609,nssv2847600,nssv2847750,nssv2847794,nssv2847748,nssv2847700,nssv2847798,nssv2847677,nssv2847828,nssv2847770,nssv2847587,nssv2847647,nssv2847802,nssv2847787,nssv2847720,nssv2847608,nssv2847638,nssv2847666,nssv2847810,nssv2847635,nssv2847721,nssv2847860,nssv2847670,nssv2847874,nssv2847606,nssv2847648,nssv2847569,nssv2847628,nssv2847564,nssv2847840,nssv2847712,nssv2847735,nssv2847811,nssv2847592,nssv2847650,nssv2847732,nssv2847584,nssv2847864,nssv2847865,nssv2847550,nssv2847699,nssv2847575,nssv2847643,nssv2847786,nssv2847843,nssv2847615,nssv2847623,nssv2847652,nssv2847878,nssv2847778,nssv2847818,nssv2847734,nssv2847791,nssv2847755,nssv2847702,nssv2847757,nssv2847845,nssv2847873,nssv2847554,nssv2847719,nssv2847689,nssv2847688,nssv2847563,nssv2847577,nssv2847766,nssv2847825,nssv2847737,nssv2847759,nssv2847877,nssv2847853,nssv2847561,nssv2847607,nssv2847813,nssv2847589,nssv2847876,nssv2847739,nssv2847602,nssv2847631,nssv2847709,nssv2847863,nssv2847716,nssv2847725,nssv2847686,nssv2847767,nssv2847806,nssv2847848,nssv2847846,nssv2847731,nssv2847852,nssv2847816,nssv2847678,nssv2847658,nssv2847779,nssv2847667,nssv2847562,nssv2847783,nssv2847565,nssv2847679,nssv2847673,nssv2847555,nssv2847841,nssv2847780,nssv2847742,nssv2847675,nssv2847595,nssv2847729,nssv2847834,nssv2847792,nssv2847854,nssv2847741,nssv2847685,nssv2847671,nssv2847605,nssv2847837,nssv2847744,nssv2847822,nssv2847591,nssv2847649,nssv2847624,nssv2847655,nssv2847795,nssv2847567,nssv2847661,nssv2847809,nssv2847614,nssv2847612,nssv2847714,nssv2847879,nssv2847676,nssv2847756,nssv2847797,nssv2847777,nssv2847830,nssv2847866,nssv2847598,nssv2847815,nssv2847826,nssv2847774,nssv2847594,nssv2847833,nssv2847713,nssv2847574,nssv2847617,nssv2847627,nssv2847653,nssv2847805,nssv2847835,nssv2847849,nssv2847726,nssv2847559,nssv2847596,nssv2847625,nssv2847799,nssv2847814,nssv2847804,nssv2847760,nssv2847621,nssv2847782,nssv2847552,nssv2847722,nssv2847566,nssv2847717,nssv2847644,nssv2847680,nssv2847862,nssv2847823,nssv2847875,nssv2847871,nssv2847693,nssv2847654,nssv2847807,nssv2847610,nssv2847629,nssv2847788,nssv2847570,nssv2847765,nssv2847723,nssv2847771,nssv2847857,nssv2847694,nssv2847796,nssv2847855,nssv2847812,nssv2847620,nssv2847736,nssv2847776,nssv2847684,nssv2847769,nssv2847827,nssv2847586,nssv2847724,nssv2847626,nssv2847793,nssv2847781,nssv2847579,nssv2847727,nssv2847632,nssv2847664,nssv2847597,nssv2847637,nssv2847683,nssv2847761,nssv2847711,nssv2847839,nssv2847746,nssv2847842,nssv2847821,nssv2847692,nssv2847859,nssv2847706,nssv2847573 M 2366 0 330 "" NA06985,NA06989,NA06991,NA06993,NA06995,NA07000,NA07019,NA07022,NA07034,NA07051,NA07346,NA07347,NA07348,NA07349,NA07435,NA10835,NA10838,NA10839,NA10843,NA10845,NA10846,NA10850,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11832,NA11839,NA11840,NA11881,NA11882,NA11892,NA11893,NA11894,NA11918,NA11920,NA11930,NA11992,NA11993,NA11994,NA12004,NA12005,NA12044,NA12056,NA12058,NA12144,NA12234,NA12236,NA12239,NA12249,NA12272,NA12274,NA12340,NA12348,NA12375,NA12376,NA12383,NA12414,NA12485,NA12546,NA12717,NA12751,NA12760,NA12767,NA12778,NA12801,NA12813,NA12818,NA12829,NA12830,NA12832,NA12843,NA12864,NA12872,NA12875,NA18484,NA18485,NA18486,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18507,NA18510,NA18511,NA18517,NA18518,NA18519,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18564,NA18566,NA18570,NA18571,NA18572,NA18576,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18633,NA18635,NA18637,NA18852,NA18853,NA18854,NA18856,NA18859,NA18860,NA18868,NA18869,NA18870,NA18871,NA18872,NA18874,NA18875,NA18907,NA18909,NA18910,NA18911,NA18917,NA18924,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18960,NA18961,NA18964,NA18966,NA18967,NA18968,NA18969,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18991,NA18994,NA18998,NA19000,NA19003,NA19007,NA19012,NA19092,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19102,NA19103,NA19108,NA19109,NA19113,NA19114,NA19116,NA19117,NA19119,NA19120,NA19122,NA19127,NA19130,NA19131,NA19132,NA19137,NA19138,NA19141,NA19143,NA19145,NA19147,NA19148,NA19149,NA19151,NA19152,NA19159,NA19160,NA19171,NA19172,NA19173,NA19178,NA19179,NA19180,NA19181,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19209,NA19210,NA19211,NA19222,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19257,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21359,NA21360,NA21361,NA21363,NA21365,NA21366,NA21382,NA21383,NA21386,NA21387,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21479,NA21480,NA21486,NA21488,NA21489,NA21490,NA21494,NA21512,NA21513,NA21514,NA21522,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21634,NA21636,NA21648,NA21686,NA21717,NA21718 esv33680 1 105820367 105823439 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94752,essv98450,essv101091 M 51 0 3 "" 21693,21791,22352 dgv453n54 1 105820402 105823286 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547266,nsv547252,nsv547251 M 17421 11 6 "" dgv454n54 1 105820402 105824879 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547255,nsv547257,nsv547254,nsv547253,nsv547271,nsv547267,nsv547269 M 17421 16 240 "" dgv455n54 1 105820402 105824879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547278,nsv547256,nsv547275,nsv547276,nsv547277,nsv547270 M 17421 0 37 "" nsv547258 1 105820402 105831892 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720589 M 17421 0 1 "" dgv456n54 1 105820402 105865764 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547260,nsv547259,nsv547261 M 17421 4 0 "" dgv457n54 1 105820402 105890665 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547301,nsv547300,nsv547281,nsv547299,nsv547263,nsv547262,nsv547264,nsv547265 M 17421 8 0 "" nsv547268 1 105820611 105824265 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720615,nssv720617,nssv720618,nssv720616,nssv720619 M 17421 5 0 "" nsv547272 1 105820611 105831892 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720636 M 17421 1 0 "" dgv7n17 1 105820688 105828887 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437232,nsv437233,nsv437234 M 60 0 3 "" NA18503,NA19103,NA19211 dgv244n100 1 105820716 105832112 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006869,nsv1013448,nsv1000743 M 29084 5 0 "" dgv245n100 1 105820716 105832112 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003704,nsv1007662 M 29084 13 4 "" nsv1001129 1 105820716 105837668 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484313 M 29084 1 0 "" nsv1012202 1 105820716 105846698 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492780 M 29084 1 0 "" dgv246n100 1 105820716 105862244 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006210,nsv1007362 M 29084 2 0 "" esv2421712 1 105820728 105823898 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5079806,essv5057827,essv5157250,essv5073118,essv5047833,essv5005810,essv5074889,essv5121602,essv5132801,essv5102797,essv5133200,essv5078844,essv5014799,essv5109726,essv5060522,essv5007505,essv5012482,essv5030936,essv5014678,essv5099608,essv5126514,essv5061661,essv5108257,essv5153369,essv5106663,essv5149100,essv5007603,essv5025050,essv5064542,essv5157442,essv5010342,essv5101787,essv5156587,essv5045629,essv5149636,essv5051820,essv5133831,essv5089195,essv5105293,essv5049721,essv5160144,essv5097256,essv5157600,essv5066250,essv5116498,essv5129544,essv5019107,essv5099785,essv5116699,essv5089468,essv5142208,essv5036719,essv5088415,essv5130604,essv5059714,essv5140788,essv5159891,essv5155906,essv5044290,essv5139093,essv5090084,essv5085637,essv5094874,essv5019563,essv5063656,essv5091429,essv5147636,essv5083165,essv5016571,essv5060333,essv5157660,essv5054698,essv5107399,essv5139538,essv5026860,essv5109334,essv5129459,essv5149875,essv5011416,essv5016535,essv5090746,essv5115250,essv5055123,essv5133627,essv5036876,essv5074677,essv5049276,essv5115727,essv5077970,essv5075637,essv5079745,essv5076045,essv5148075,essv5092525,essv5046622,essv5097349,essv5140096,essv5099181,essv5006480,essv5130416,essv5125051,essv5085938,essv5143731,essv5020351,essv5128238,essv5011704,essv5141442,essv5055043,essv5024988,essv5044620,essv5119247,essv5065778,essv5056246,essv5084210,essv5010965,essv5119754,essv5141999,essv5032168,essv5111985,essv5006603,essv5030830,essv5069210,essv5114562,essv5020569,essv5088531,essv5080857,essv5157433,essv5114967,essv5035243,essv5147369,essv5113901,essv5126687,essv5011544,essv5101093,essv5142512,essv5073324,essv5013408,essv5066595,essv5070560,essv5149897,essv5107040,essv5015502,essv5159133,essv5107579,essv5004517,essv5106083,essv5085253,essv5035483,essv5153537,essv5126783,essv5083372,essv5017556,essv5056630,essv5139671,essv5130392,essv5131607,essv5076120,essv5124826,essv5126115,essv5126053,essv5041066,essv5035170,essv5003891,essv5054312,essv5102322,essv5084479,essv5156063,essv5014193,essv5065555,essv5055619,essv5068928,essv5070176,essv5112104,essv5047701,essv5114152,essv5126436,essv5031160,essv5060387,essv5078495,essv5114260,essv5032308,essv5103825,essv5146257,essv5033543,essv5019782,essv5034503,essv5008828,essv5073288,essv5011323,essv5134785,essv5020794,essv5087207,essv5114333,essv5023605,essv5040876,essv5147664,essv5145311,essv5007168,essv5005845,essv5099397,essv5159752,essv5056747,essv5031224,essv5125653,essv5106462,essv5090223,essv5131233,essv5098715,essv5097509,essv5110748,essv5051369,essv5099901,essv5095300,essv5070219,essv5105543,essv5085500,essv5140095,essv5029903,essv5116476,essv5050399,essv5116419,essv5134439,essv5040350,essv5019146,essv5157493,essv5087667,essv5134582,essv5103562,essv5148942,essv5004045,essv5093818,essv5022635,essv5032712,essv5115311,essv5156692,essv5139748,essv5055072,essv5032221,essv5123067,essv5081491,essv5025104,essv5136221,essv5088527,essv5132105,essv5136755,essv5091686,essv5052374,essv5007194,essv5050278,essv5101605,essv5068766,essv5160002,essv5143517,essv5142443,essv5037867,essv5009286,essv5036278,essv5016072,essv5088898,essv5046233,essv5147753,essv5095553,essv5063036,essv5160326,essv5141332,essv5147914,essv5077997,essv5088786,essv5104776,essv5142660,essv5027341,essv5121963,essv5092135,essv5026992,essv5047819,essv5101468,essv5075428,essv5098649,essv5134660,essv5089944,essv5145763,essv5109737,essv5120091,essv5024341,essv5025185,essv5017631,essv5072594,essv5038077,essv5091083,essv5008066,essv5135097,essv5035879,essv5026522,essv5136505,essv5139219,essv5152578,essv5020043,essv5091623,essv5015272,essv5148703,essv5046588,essv5079846,essv5101726,essv5076248,essv5011710,essv5151345,essv5014363,essv5055141,essv5115813,essv5018387,essv5049305,essv5032836,essv5065556,essv5121339,essv5048046,essv5065621,essv5135553,essv5148815,essv5072294,essv5146351,essv5059845,essv5012057,essv5155323,essv5118847,essv5102042,essv5037853,essv5043676,essv5011017,essv5126041,essv5158032,essv5148360,essv5050151,essv5150153,essv5137236,essv5154771,essv5120880,essv5144602,essv5098867,essv5126209,essv5154417,essv5149274,essv5113007,essv5035594,essv5019018,essv5032561,essv5140722,essv5100063,essv5107135,essv5003529,essv5116694,essv5144342,essv5146754,essv5115059,essv5132427,essv5059551,essv5048780,essv5060266,essv5099109,essv5016777,essv5154145,essv5090058,essv5106517,essv5105397,essv5070182,essv5144531,essv5098489,essv5014577,essv5091277,essv5152944,essv5107026,essv5105986,essv5055497,essv5086560,essv5071048,essv5016537,essv5073481,essv5106813,essv5047313,essv5072372,essv5158978,essv5027605,essv5146784,essv5114723,essv5135358,essv5046048,essv5131213,essv5095497,essv5117119,essv5034781,essv5112432,essv5105553,essv5105792,essv5123538,essv5114410,essv5131687,essv5159398,essv5131565,essv5061935,essv5090600,essv5032178,essv5097835,essv5142437,essv5140124,essv5143067,essv5035082,essv5124372,essv5062994,essv5145593,essv5102054,essv5154206,essv5080171,essv5058858,essv5044517,essv5127231,essv5075244,essv5025347,essv5120780,essv5011361,essv5040034,essv5083834,essv5039075,essv5006816,essv5120589,essv5008500,essv5038705,essv5070588,essv5078533,essv5137169,essv5131568,essv5090344,essv5117085,essv5062694,essv5104784,essv5055446,essv5027639,essv5154951,essv5116528,essv5083216,essv5155815,essv5084130,essv5041170,essv5043633,essv5050075,essv5094223,essv5084652,essv5098758,essv5108141,essv5045729,essv5070276,essv5037661,essv5116010,essv5090573,essv5045192,essv5063494,essv5127758,essv5025759,essv5150445,essv5039665,essv5003863,essv5102947,essv5151157,essv5045261,essv5157758,essv5144069,essv5063620,essv5058679,essv5062351,essv5085811,essv5120761,essv5158270,essv5002250,essv5028822,essv5015565,essv5013858,essv5005742,essv5026151,essv5029220,essv5131299,essv5059099,essv5120005,essv5055010,essv5012824,essv5071939,essv5093746,essv5128366,essv5113212,essv5023919,essv5132510,essv5112033,essv5157625,essv5114749,essv5068401,essv5102139,essv5008074,essv5014174,essv5042183,essv5018374,essv5136340,essv5092563,essv5132360,essv5120514,essv5146162,essv5050675,essv5038977,essv5078291,essv5019745,essv5007727,essv5129806,essv5011896,essv5133768,essv5075516,essv5053139,essv5104695,essv5107229,essv5024621,essv5039485,essv5023155,essv5114960,essv5035732,essv5029924,essv5049683,essv5040990,essv5054712,essv5069607,essv5138893,essv5077073,essv5111513,essv5066402,essv5047290,essv5072408,essv5030613,essv5092035,essv5018409,essv5121604,essv5122239,essv5017092,essv5112461,essv5109360,essv5053350,essv5056808,essv5154528,essv5005844,essv5093678,essv5154495,essv5100196,essv5065960,essv5142128,essv5061730,essv5128324,essv5158182,essv5033941,essv5107163,essv5153569,essv5046212,essv5070901,essv5088472,essv5064684,essv5027142,essv5117936,essv5053709,essv5072498,essv5084318,essv5150740,essv5140121,essv5033508,essv5154081,essv5068610,essv5123141,essv5140696,essv5159313,essv5071362,essv5122692,essv5143256,essv5106377,essv5074406,essv5103163,essv5037209,essv5104089,essv5121275,essv5010509,essv5134724,essv5138396,essv5104505,essv5138294,essv5105019,essv5101198,essv5058729,essv5147242,essv5023401,essv5140317,essv5039271,essv5054501,essv5148256,essv5031522,essv5145097,essv5090526,essv5058742,essv5130440,essv5087605,essv5098458,essv5052147,essv5093953,essv5041680,essv5047440,essv5081595,essv5015252,essv5016314,essv5022122,essv5054106,essv5020589,essv5150070,essv5016603,essv5086839,essv5120976,essv5082178,essv5130880,essv5043714,essv5121472,essv5076156,essv5002948,essv5078560,essv5128195,essv5147110,essv5085240,essv5117575,essv5154769,essv5145220,essv5010824,essv5016440,essv5125849,essv5015893,essv5145630,essv5083925,essv5071445,essv5155917,essv5056060,essv5039625,essv5011453,essv5022059,essv5024370,essv5126367,essv5081883,essv5062679,essv5128054,essv5137976,essv5005374,essv5057889,essv5066336,essv5135641,essv5014854,essv5046487,essv5152024,essv5135912,essv5088470,essv5028914,essv5012141,essv5029866,essv5151672,essv5027794,essv5054265,essv5072980,essv5057671,essv5028476,essv5064504,essv5021998,essv5009645,essv5098635,essv5122732,essv5073001,essv5004581,essv5076051,essv5016823,essv5063983,essv5061212,essv5098298,essv5026550,essv5024497,essv5155020,essv5154477,essv5017796,essv5023986,essv5034833,essv5133465,essv5036434,essv5029113,essv5041115,essv5079840,essv5011963,essv5033961,essv5094848,essv5145125,essv5082286,essv5002608,essv5070304,essv5047308,essv5034057,essv5087297,essv5117062,essv5065256,essv5053226,essv5142897,essv5130293,essv5113940,essv5011249,essv5110494,essv5080487,essv5048505,essv5039153,essv5066111,essv5128656,essv5034221,essv5122780,essv5106412,essv5118417,essv5146802,essv5083779,essv5064604,essv5017763,essv5051046,essv5090293,essv5149470,essv5088768,essv5049406,essv5040669,essv5138236,essv5147277,essv5091250,essv5085894,essv5075607,essv5034309,essv5026003,essv5128715,essv5124868,essv5081668,essv5141362,essv5120010,essv5144392,essv5042172,essv5105853,essv5029127,essv5105427,essv5026726,essv5072142,essv5065180,essv5021369,essv5160822,essv5160149,essv5102589,essv5087403,essv5121084,essv5139900,essv5017230,essv5156853,essv5005574,essv5021596,essv5024557,essv5124527,essv5047033,essv5056004,essv5108074,essv5138996,essv5105736,essv5074605,essv5052646,essv5149744,essv5115887,essv5087997,essv5150536,essv5072837,essv5118922,essv5028889,essv5076674,essv5078413,essv5160180,essv5043333,essv5021424,essv5007126,essv5035090,essv5112447,essv5064146,essv5006861,essv5119280,essv5082597,essv5143057,essv5098229,essv5074192,essv5038320,essv5041249,essv5156999,essv5049298,essv5058549,essv5100639,essv5151486,essv5021900,essv5092383,essv5126735,essv5038559,essv5009436,essv5032767,essv5002880,essv5112200,essv5129319,essv5033530,essv5101801,essv5154044,essv5115100,essv5048741,essv5080183,essv5080101,essv5003518,essv5094580,essv5069622,essv5068001,essv5125482,essv5056859,essv5018840,essv5021341,essv5017469,essv5114124,essv5072060,essv5111526,essv5122620,essv5062942,essv5151009,essv5077865,essv5084077,essv5079302,essv5064208,essv5077107,essv5009236,essv5031461,essv5056750,essv5141729,essv5020462,essv5124156,essv5112474,essv5026496,essv5058508,essv5016952,essv5077389,essv5130021,essv5029831 M 1184 0 842 "" NA06985,NA06989,NA06991,NA06993,NA06995,NA06997,NA07000,NA07022,NA07045,NA07051,NA07345,NA07346,NA07347,NA07348,NA07349,NA07435,NA10835,NA10838,NA10839,NA10843,NA10845,NA10846,NA10850,NA10852,NA10853,NA10854,NA10855,NA10856,NA10859,NA10861,NA10863,NA10864,NA10865,NA11829,NA11830,NA11832,NA11839,NA11840,NA11881,NA11882,NA11891,NA11892,NA11893,NA11894,NA11918,NA11920,NA11930,NA11992,NA11993,NA11994,NA12005,NA12006,NA12044,NA12056,NA12144,NA12234,NA12239,NA12249,NA12272,NA12340,NA12348,NA12375,NA12376,NA12383,NA12413,NA12546,NA12707,NA12751,NA12760,NA12767,NA12778,NA12801,NA12813,NA12818,NA12829,NA12830,NA12832,NA12843,NA12864,NA12865,NA12872,NA12875,NA17962,NA17965,NA17966,NA17967,NA17968,NA17969,NA17970,NA17972,NA17974,NA17975,NA17976,NA17977,NA17979,NA17981,NA17982,NA17983,NA17988,NA17989,NA17993,NA17995,NA17996,NA17997,NA17998,NA18101,NA18102,NA18105,NA18106,NA18107,NA18108,NA18109,NA18114,NA18117,NA18118,NA18120,NA18124,NA18125,NA18128,NA18129,NA18131,NA18132,NA18134,NA18135,NA18136,NA18138,NA18139,NA18140,NA18143,NA18144,NA18146,NA18147,NA18148,NA18149,NA18150,NA18153,NA18154,NA18156,NA18157,NA18158,NA18159,NA18160,NA18161,NA18162,NA18166,NA18484,NA18485,NA18486,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18507,NA18510,NA18511,NA18517,NA18518,NA18519,NA18520,NA18524,NA18529,NA18532,NA18534,NA18536,NA18537,NA18542,NA18544,NA18545,NA18546,NA18548,NA18550,NA18552,NA18555,NA18557,NA18558,NA18559,NA18561,NA18562,NA18564,NA18566,NA18570,NA18571,NA18572,NA18576,NA18579,NA18582,NA18592,NA18593,NA18595,NA18599,NA18602,NA18603,NA18605,NA18608,NA18609,NA18610,NA18611,NA18612,NA18614,NA18615,NA18616,NA18618,NA18620,NA18621,NA18622,NA18623,NA18624,NA18626,NA18627,NA18628,NA18630,NA18631,NA18633,NA18634,NA18635,NA18637,NA18638,NA18640,NA18641,NA18642,NA18643,NA18645,NA18647,NA18670,NA18674,NA18682,NA18685,NA18689,NA18696,NA18702,NA18704,NA18745,NA18747,NA18749,NA18757,NA18852,NA18853,NA18854,NA18858,NA18859,NA18860,NA18868,NA18869,NA18870,NA18871,NA18872,NA18874,NA18875,NA18909,NA18910,NA18911,NA18912,NA18914,NA18917,NA18924,NA18930,NA18933,NA18934,NA18935,NA18939,NA18940,NA18942,NA18943,NA18944,NA18945,NA18946,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18954,NA18955,NA18956,NA18957,NA18960,NA18961,NA18963,NA18964,NA18966,NA18967,NA18968,NA18969,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18978,NA18979,NA18980,NA18981,NA18987,NA18991,NA18993,NA18994,NA18998,NA19000,NA19001,NA19002,NA19007,NA19010,NA19028,NA19035,NA19036,NA19038,NA19044,NA19054,NA19055,NA19056,NA19057,NA19059,NA19060,NA19062,NA19063,NA19065,NA19066,NA19067,NA19068,NA19070,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19083,NA19084,NA19085,NA19086,NA19087,NA19088,NA19095,NA19096,NA19097,NA19099,NA19102,NA19103,NA19108,NA19109,NA19113,NA19114,NA19116,NA19117,NA19119,NA19120,NA19122,NA19127,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19141,NA19143,NA19147,NA19148,NA19149,NA19151,NA19152,NA19159,NA19160,NA19171,NA19172,NA19173,NA19178,NA19179,NA19180,NA19181,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19203,NA19204,NA19206,NA19207,NA19209,NA19210,NA19211,NA19213,NA19222,NA19224,NA19225,NA19226,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19257,NA19307,NA19308,NA19309,NA19314,NA19317,NA19318,NA19319,NA19321,NA19324,NA19327,NA19328,NA19332,NA19334,NA19346,NA19350,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19391,NA19393,NA19394,NA19396,NA19397,NA19398,NA19399,NA19403,NA19404,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19455,NA19456,NA19457,NA19462,NA19463,NA19466,NA19467,NA19468,NA19469,NA19470,NA19471,NA19473,NA19474,NA19649,NA19650,NA19651,NA19653,NA19654,NA19658,NA19659,NA19660,NA19661,NA19662,NA19663,NA19664,NA19665,NA19670,NA19671,NA19675,NA19677,NA19685,NA19686,NA19700,NA19701,NA19702,NA19703,NA19704,NA19705,NA19708,NA19711,NA19713,NA19714,NA19716,NA19718,NA19719,NA19721,NA19722,NA19723,NA19724,NA19726,NA19727,NA19746,NA19747,NA19748,NA19749,NA19750,NA19751,NA19756,NA19757,NA19760,NA19762,NA19770,NA19772,NA19773,NA19775,NA19776,NA19777,NA19778,NA19779,NA19788,NA19789,NA19790,NA19794,NA19795,NA19796,NA19818,NA19819,NA19834,NA19835,NA19900,NA19901,NA19902,NA19916,NA19917,NA19918,NA19921,NA19982,NA19985,NA20126,NA20128,NA20129,NA20276,NA20281,NA20282,NA20284,NA20287,NA20288,NA20289,NA20290,NA20291,NA20292,NA20294,NA20297,NA20300,NA20301,NA20317,NA20319,NA20322,NA20333,NA20334,NA20335,NA20336,NA20337,NA20340,NA20341,NA20344,NA20346,NA20347,NA20348,NA20349,NA20350,NA20356,NA20357,NA20358,NA20359,NA20364,NA20502,NA20506,NA20508,NA20509,NA20510,NA20515,NA20517,NA20519,NA20521,NA20522,NA20525,NA20528,NA20530,NA20531,NA20534,NA20535,NA20539,NA20540,NA20541,NA20542,NA20543,NA20544,NA20581,NA20586,NA20589,NA20753,NA20754,NA20755,NA20757,NA20758,NA20759,NA20760,NA20761,NA20765,NA20766,NA20769,NA20771,NA20773,NA20778,NA20783,NA20785,NA20787,NA20790,NA20795,NA20796,NA20797,NA20799,NA20800,NA20803,NA20804,NA20805,NA20806,NA20807,NA20808,NA20810,NA20815,NA20816,NA20819,NA20826,NA20828,NA20845,NA20846,NA20847,NA20849,NA20850,NA20853,NA20854,NA20856,NA20859,NA20861,NA20862,NA20869,NA20872,NA20874,NA20875,NA20876,NA20881,NA20884,NA20885,NA20887,NA20892,NA20898,NA20901,NA20902,NA20906,NA20909,NA20910,NA20911,NA21086,NA21088,NA21089,NA21091,NA21099,NA21100,NA21103,NA21107,NA21108,NA21111,NA21113,NA21115,NA21117,NA21118,NA21137,NA21141,NA21142,NA21143,NA21295,NA21300,NA21302,NA21303,NA21307,NA21308,NA21309,NA21311,NA21312,NA21313,NA21314,NA21316,NA21317,NA21318,NA21320,NA21333,NA21336,NA21339,NA21352,NA21353,NA21356,NA21359,NA21360,NA21361,NA21363,NA21364,NA21365,NA21366,NA21368,NA21371,NA21378,NA21382,NA21383,NA21385,NA21386,NA21387,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21402,NA21403,NA21404,NA21405,NA21414,NA21415,NA21417,NA21418,NA21421,NA21423,NA21424,NA21425,NA21434,NA21436,NA21439,NA21440,NA21441,NA21442,NA21447,NA21451,NA21453,NA21454,NA21455,NA21457,NA21473,NA21475,NA21476,NA21477,NA21479,NA21480,NA21486,NA21488,NA21489,NA21490,NA21491,NA21494,NA21509,NA21510,NA21512,NA21513,NA21514,NA21517,NA21519,NA21520,NA21522,NA21524,NA21525,NA21526,NA21527,NA21528,NA21529,NA21573,NA21574,NA21575,NA21576,NA21577,NA21578,NA21580,NA21582,NA21583,NA21596,NA21599,NA21600,NA21601,NA21608,NA21611,NA21613,NA21614,NA21616,NA21617,NA21619,NA21620,NA21631,NA21632,NA21634,NA21636,NA21648,NA21650,NA21682,NA21683,NA21685,NA21686,NA21689,NA21693,NA21717,NA21718,NA21719,NA21722,NA21733,NA21738,NA21739,NA21741,NA21776,NA21784,NA21825,NA21826 esv3584593 1 105820728 105823898 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838889,essv9838900,essv9838922,essv9838867,essv9838911,essv9838878 M 34 0 6 "" 2RB,B4,OA013,OA053,OA064,OA072 nsv442944 1 105820728 105823898 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1618264,nssv1616666,nssv1616690,nssv1616752,nssv1618255,nssv1616772,nssv1616773,nssv1616754,nssv1618254,nssv1616671,nssv1618273,nssv1616727,nssv1616616,nssv1616673,nssv1616660,nssv1616762,nssv1616637,nssv1616746,nssv1616749,nssv1616631,nssv1616693,nssv1616722,nssv1616757,nssv1616748,nssv1616661,nssv1616621,nssv1616717,nssv1616715,nssv1618275,nssv1618277,nssv1616692,nssv1616775,nssv1616719,nssv1616753,nssv1616679,nssv1616743,nssv1616734,nssv1616628,nssv1616672,nssv1616617,nssv1616656,nssv1616642,nssv1616667,nssv1616751,nssv1616733,nssv1616784,nssv1618266,nssv1616700,nssv1616633,nssv1616684,nssv1616771,nssv1618274,nssv1618267,nssv1616688,nssv1618249,nssv1616626,nssv1616779,nssv1616708,nssv1616697,nssv1616639,nssv1616723,nssv1616678,nssv1616766,nssv1616674,nssv1616767,nssv1616737,nssv1616774,nssv1616705,nssv1616756,nssv1616664,nssv1616630,nssv1618278,nssv1616663,nssv1616662,nssv1618256,nssv1618265,nssv1616643,nssv1616665,nssv1616745,nssv1616778,nssv1616783,nssv1616738,nssv1616668,nssv1616623,nssv1616714,nssv1616686,nssv1616764,nssv1616739,nssv1616645,nssv1616649,nssv1618260,nssv1616731,nssv1616728,nssv1616781,nssv1616759,nssv1616703,nssv1616750,nssv1618269,nssv1616776,nssv1616652,nssv1616619,nssv1616695,nssv1616650,nssv1616718,nssv1618258,nssv1616765,nssv1616641,nssv1618253,nssv1616618,nssv1616704,nssv1616782,nssv1616696,nssv1616670,nssv1616635,nssv1616760,nssv1616648,nssv1616768,nssv1618263,nssv1616711,nssv1618247,nssv1616624,nssv1616638,nssv1616682,nssv1616689,nssv1618261,nssv1616730,nssv1616763,nssv1616644,nssv1616741,nssv1616716,nssv1616681,nssv1616685,nssv1616729,nssv1616627,nssv1618272,nssv1616620,nssv1616726,nssv1618250,nssv1616687,nssv1616632,nssv1616755,nssv1616761,nssv1616659,nssv1616655,nssv1616744,nssv1616732,nssv1616640,nssv1616706,nssv1616699,nssv1618262,nssv1616701,nssv1616629,nssv1616777,nssv1618248,nssv1618270,nssv1616676,nssv1616710,nssv1616721,nssv1616770,nssv1616694,nssv1616712,nssv1616683,nssv1616675,nssv1616720,nssv1616651,nssv1616646,nssv1616653,nssv1618252,nssv1616707,nssv1616740,nssv1618259,nssv1618276,nssv1618251,nssv1616622,nssv1616742,nssv1616698,nssv1616677,nssv1618271,nssv1616634,nssv1616615,nssv1616654,nssv1616657,nssv1616709,nssv1616735 M 270 0 184 "" NA06985,NA06991,NA06993,NA07000,NA07019,NA07022,NA07034,NA07345,NA07348,NA10835,NA10838,NA10839,NA10846,NA10854,NA10855,NA10856,NA10857,NA10859,NA10860,NA10861,NA10863,NA11829,NA11830,NA11832,NA11839,NA11840,NA11881,NA11882,NA11992,NA11993,NA11994,NA12004,NA12005,NA12006,NA12044,NA12056,NA12144,NA12234,NA12236,NA12239,NA12249,NA12707,NA12717,NA12751,NA12760,NA12801,NA12813,NA12864,NA12865,NA12872,NA12875,NA18500,NA18501,NA18502,NA18503,NA18504,NA18507,NA18517,NA18524,NA18529,NA18532,NA18537,NA18540,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18562,NA18564,NA18566,NA18570,NA18571,NA18572,NA18576,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18623,NA18624,NA18633,NA18635,NA18637,NA18852,NA18853,NA18854,NA18856,NA18858,NA18859,NA18860,NA18870,NA18871,NA18872,NA18912,NA18914,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18960,NA18961,NA18964,NA18966,NA18967,NA18968,NA18969,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18991,NA18994,NA18998,NA19000,NA19003,NA19007,NA19012,NA19092,NA19098,NA19099,NA19100,NA19102,NA19103,NA19116,NA19119,NA19120,NA19127,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19141,NA19143,NA19145,NA19152,NA19159,NA19160,NA19171,NA19172,NA19173,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19207,NA19209,NA19210,NA19211,NA19222,NA19239,NA19240 dgv458n54 1 105821026 105823792 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547274,nsv547282,nsv547273 M 17421 0 9 "" dgv459n54 1 105821026 105827987 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547279,nsv547280,nsv547287 M 17421 0 3 "" dgv460n54 1 105821483 105824879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547296,nsv547286,nsv547283,nsv547285,nsv547284,nsv547295,nsv547289,nsv547288,nsv547294,nsv547292,nsv547291,nsv547293,nsv547290 M 17421 0 19 "" nsv547297 1 105822486 105824879 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720690 M 17421 0 1 "" nsv547298 1 105822922 105827431 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720691,nssv720692 M 17421 0 2 "" dgv27n27 1 105827431 105924364 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv462973,nsv462962 M 1557 2 0 "" 1780862081_A,1780862528_A dgv461n54 1 105827431 105929646 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547302,nsv547303 M 17421 3 0 "" 1780862081_A,1780862528_A dgv462n54 1 105827431 105974011 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547305,nsv547304 M 17421 2 0 "" 1780862202_A nsv462984 1 105827431 105974011 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539024 M 1557 1 0 "" 1780862202_A esv2750797 1 105830601 105888503 CNV gain Pinto_et_al_2007 17911159 SNP array essv6986426,essv6983411,essv6983412 M 771 3 0 "" BEC_651 esv3893923 1 105831868 106065063 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25799329,essv25797897,essv25798500,essv25796068,essv25786040,essv25799424,essv25779848,essv25783823,essv25796254,essv25784419,essv25785034,essv25782838,essv25798252,essv25787639,essv25796365,essv25799654,essv25784621,essv25798732,essv25779085,essv25798665,essv25787307,essv25797858,essv25780215,essv25799881,essv25779859,essv25787399,essv25787483,essv25796623,essv25781352,essv25785403,essv25780031,essv25796099,essv25796899,essv25787099,essv25780416,essv25796841,essv25781262,essv25795976,essv25778451,essv25797624,essv25784382,essv25782403,essv25778944,essv25797822,essv25797206,essv25785821,essv25797216,essv25782488,essv25785983,essv25789103,essv25781540,essv25778364 M 3017 1 51 "" esv23901 1 105838007 105839173 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18985 M 40 0 3 "" NA18517,NA18909,NA19190 nsv10495 1 105838653 105852237 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16752,nssv17421 M 31 0 2 "" NA18502,NA18860 nsv547306 1 105838940 105882130 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720698 M 17421 0 1 "" nsv547307 1 105847571 105964901 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720699 M 17421 0 1 "" nsv821618 1 105861577 106036917 CNV gain Sebat_et_al_2004 15273396 ROMA nssv1421407 M 31 1 0 "" nsv480686 1 105877636 105877636 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017259 M 9 0 0 "" nsv547308 1 105892839 105929646 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720700 M 17421 0 1 "" esv26439 1 105906441 105923927 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15506 M 40 1 0 "" NA18502 esv993109 1 105912220 105915478 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563745 M 3 1 0 "" HuRef nsv436782 1 105915398 105915488 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466195 M 2 1 0 "" NA18505 esv1261684 1 105915479 105915479 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3728857 M 2 1 0 "" HuRef dgv463n54 1 105924364 105966387 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547309,nsv547311,nsv547310,nsv547313,nsv547312 M 17421 0 7 "" HGDP00003,HGDP00738,HGDP00963,HGDP01213,HGDP01286,HGDP01325 dgv28n27 1 105924888 105966387 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463028,nsv463017,nsv462995,nsv463006 M 1557 0 4 "" HGDP00003,HGDP00738,HGDP00963,HGDP01286 nsv10506 1 105936423 105944752 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv14739 M 31 0 1 "" NA12740 nsv441704 1 105936885 105938440 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656702,nssv1656699,nssv1656701,nssv1656703,nssv1656700 M 270 0 5 "" NA12236,NA12740,NA12750,NA12864,NA12873 dgv464n54 1 105937069 105938436 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547317,nsv547315,nsv547314 M 17421 0 5 "" nsv547316 1 105937069 105944649 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720706 M 17421 0 1 "" esv2758955 1 105946185 106025589 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756853 M 270 0 6 "" NA18521,NA18522,NA18852,NA19102,NA19103,NA19127 nsv10517 1 105951875 105954042 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16766,nssv21754,nssv18438 M 31 0 3 "" NA10839,NA18564,NA19007 dgv247n100 1 105964360 106018291 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014212,nsv1012820,nsv1013119,nsv997460,nsv1004968,nsv1000025,nsv1011824 M 29084 0 62 "" esv2764258 1 105964372 106021790 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005861,essv7005859,essv7005857,essv7005860,essv7005866,essv7005858,essv7005862,essv7005865,essv7005864,essv7005863,essv7005868,essv7005854 M 1109 0 12 "" RW_0014,RW_0029,RW_0073,RW_0100,RW_0117,RW_0169,RW_0311,RW_0529,RW_0530,RW_0546,RW_0627,RW_0643 nsv517498 1 105964901 106000090 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv683793,nssv661483,nssv652191,nssv663113,nssv659568,nssv653352,nssv682444,nssv676098,nssv660815,nssv687918,nssv657290,nssv659184,nssv655378,nssv665031,nssv665963,nssv666639,nssv671457,nssv685345,nssv669737,nssv662180,nssv692107 M 2026 0 21 "" nsv463039 1 105965721 106005990 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539070 M 1557 0 1 "" HGDP00780 nsv547318 1 105965721 106005990 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173098 M 17421 0 1 "" HGDP00780 esv22007 1 105965926 106016051 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15914 M 40 0 1 "" NA19108 nsv818311 1 105966387 106000090 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417813 M 112 0 1 "" NA18852 esv2421998 1 105966387 106016552 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5008035,essv5106831,essv5124536,essv5160590,essv5015362,essv5073059,essv5033052,essv5139606,essv5123801,essv5104039,essv5047288,essv5044644,essv5135393,essv5020772,essv5055847,essv5127345,essv5130223,essv5132558,essv5140075,essv5071352,essv5075375,essv5065018 M 1184 0 22 "" NA18852,NA18910,NA18911,NA19102,NA19103,NA19108,NA19109,NA19127,NA19181,NA19373,NA19374,NA19384,NA19404,NA19449,NA19708,NA20359,NA21316,NA21317,NA21318,NA21336,NA21385,NA21600 dgv465n54 1 105966387 106023029 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547319,nsv547320 M 17421 0 2 "" nsv1010616 1 105969807 106005344 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490340 M 29084 0 1 "" nsv1006540 1 105969807 106476224 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488803 M 29084 1 0 "" nsv513996 1 105969808 106015584 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2847887,nssv2847885,nssv2847882,nssv2847890,nssv2847884,nssv2847891,nssv2847881,nssv2847892,nssv2847888,nssv2847889,nssv2847886,nssv2847883,nssv2847880 M 2366 0 13 "" NA18522,NA18852,NA18910,NA18911,NA19102,NA19103,NA19108,NA19109,NA19127,NA19181,NA21316,NA21317,NA21600 nsv441705 1 105969819 106016548 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656708,nssv1656706,nssv1656709,nssv1656704,nssv1656707,nssv1656705 M 270 0 6 "" NA18521,NA18522,NA18852,NA19102,NA19103,NA19127 nsv830959 1 106021417 106209345 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448529,nssv1448540,nssv1448551 M 95 3 0 "" nsv547321 1 106065063 106076587 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720710 M 17421 0 1 "" nsv506953 1 106079376 106085376 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619248 M 4 0 0 "" NA10860 esv2761408 1 106082296 106209017 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6992534 M 1109 1 0 "" SW_1029 nsv1000553 1 106097810 106130625 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500629 M 29084 0 1 "" esv2764249 1 106097822 106122512 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005870,essv7005874,essv7005873,essv7005876,essv7005875,essv7005877,essv7005871,essv7005872,essv7005879,essv7005869,essv7005880 M 1109 0 11 "" RW_0013,RW_0032,RW_0195,RW_0237,RW_0250,RW_0277,RW_0534,RW_0535,RW_0550,RW_0630,RW_0669 esv26226 1 106109094 106119452 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20236 M 40 0 1 "" NA19099 nsv947439 1 106109776 106120417 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764121 M 97 0 1 "" HGDP01284 nsv442951 1 106110789 106116611 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1616795,nssv1616792,nssv1616790,nssv1616794,nssv1616788,nssv1616787,nssv1616785,nssv1616789,nssv1616793,nssv1616786 M 270 0 10 "" NA18515,NA18516,NA19099,NA19100,NA19144,NA19145,NA19192,NA19203,NA19221,NA19222 nsv513997 1 106110944 106116576 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2844350,nssv2844339,nssv2844348,nssv2844331,nssv2844354,nssv2844352,nssv2844351,nssv2844333,nssv2844341,nssv2844358,nssv2844338,nssv2844334,nssv2844357,nssv2844353,nssv2844355,nssv2844343,nssv2844340,nssv2844335,nssv2844342,nssv2844332,nssv2844344,nssv2844336,nssv2844356,nssv2844347,nssv2844346,nssv2844337,nssv2844345,nssv2844349 M 2366 0 28 "" NA18487,NA18498,NA18516,NA18518,NA18519,NA18873,NA18875,NA18910,NA18924,NA18925,NA18934,NA18935,NA19099,NA19100,NA19117,NA19144,NA19145,NA19150,NA19151,NA19182,NA19184,NA19186,NA19192,NA19221,NA19222,NA19235,NA19237,NA21363 esv1091477 1 106113319 106113430 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4140770 M 2 0 1 "" HuRef esv3407928 1 106128109 106128163 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900863,essv8900865,essv8900864 M 185 3 0 "" NA18501,NA18871,NA19114 nsv1015100 1 106142084 106192227 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498412 M 29084 0 1 "" nsv1008745 1 106149820 106253704 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502198 M 29084 0 1 "" esv3303790 1 106172663 106172664 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7769239 M 185 1 0 "" NA12045 esv3415469 1 106172666 106172685 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595968 M 185 1 0 "" NA12045 nsv470731 1 106206562 106266489 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547761 M 443 0 1 "" HGDP00890 nsv547322 1 106206563 106298670 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720711 M 17421 0 1 "" nsv946115 1 106233860 106235228 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780779,nssv1780732,nssv1780721,nssv1780749,nssv1780729,nssv1780774,nssv1779791,nssv1780761,nssv1779794,nssv1780736,nssv1779781,nssv1780756,nssv1779792,nssv1780791,nssv1779782,nssv1780795,nssv1779777,nssv1780793,nssv1780720,nssv1780764,nssv1779786,nssv1780772,nssv1779784,nssv1780743,nssv1779793,nssv1780760,nssv1780731,nssv1780751,nssv1780778,nssv1780748,nssv1780724,nssv1780744,nssv1780786,nssv1780734,nssv1779787,nssv1780730,nssv1780781,nssv1780765,nssv1780783,nssv1780758,nssv1780780,nssv1780773,nssv1780722,nssv1779776,nssv1779790,nssv1780742,nssv1779779,nssv1780741,nssv1779795,nssv1780794,nssv1780777,nssv1780775,nssv1779789,nssv1780746,nssv1779778,nssv1780737,nssv1780782,nssv1780739,nssv1779788,nssv1780727,nssv1779780,nssv1780733,nssv1779783,nssv1780766,nssv1780784,nssv1780759,nssv1779785,nssv1780771,nssv1780728,nssv1780754,nssv1780785,nssv1780755,nssv1780788,nssv1780787,nssv1780790,nssv1780725,nssv1780752,nssv1780776,nssv1780768,nssv1780792,nssv1780747,nssv1780763,nssv1780750,nssv1780735,nssv1780796,nssv1780767,nssv1780789,nssv1780770,nssv1780723,nssv1780769,nssv1780753,nssv1780762,nssv1780738,nssv1780740,nssv1780745,nssv1780757,nssv1780726 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv433276 1 106247680 106254841 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463157 M 9 0 1 "" NA18956 nsv2243 1 106272207 106289576 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4458 M 9 1 0 "" NA12878 dgv156e59 1 106288652 106292650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3365472,esv3334620 M 185 2 0 "" NA12878,NA12892 esv26397 1 106294022 106295503 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14321 M 40 0 1 "" NA19190 esv2503034 1 106305176 106307547 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5163462 M 1 0 1 "" NA18507 esv1750555 1 106305558 106305558 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3963355 M 2 1 0 "" HuRef esv2521167 1 106307078 106307883 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5194867 M 1 1 0 "" NA18507 esv1120470 1 106307483 106307483 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4246050 M 2 1 0 "" HuRef nsv1003785 1 106329086 106365755 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485803 M 29084 0 1 "" nsv547323 1 106341892 106379609 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720712 M 17421 0 1 "" nsv520817 1 106378678 106621321 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv701078,nssv697787,nssv678498,nssv704239,nssv675754 M 2026 1 4 "" nsv547324 1 106411380 106609160 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720713 M 17421 1 0 "" esv3893956 1 106455145 106866444 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779604 M 3017 0 1 "" esv23310 1 106536624 106537564 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19323 M 40 0 1 "" NA18505 esv2758956 1 106562085 106683105 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757744,esv2756854 M 270 0 1 "" NA18637 esv3305400 1 106590922 106590923 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7746732,essv7756146 M 185 2 0 "" NA18870,NA19138 esv3368161 1 106590932 106591002 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900866,essv8900867 M 185 2 0 "" NA18870,NA19138 nsv10528 1 106612541 106619365 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv17082 M 31 0 1 "" NA18502 esv3893967 1 106616587 106679840 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788352 M 3017 1 0 "" nsv547325 1 106679840 106757582 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720714 M 17421 0 1 "" esv2328516 1 106771039 106771499 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4581049 M 1 0 1 "" NA18507 esv1723134 1 106775419 106775419 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3945825 M 2 1 0 "" HuRef nsv159515 1 106775585 106775585 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178093 M 24 "" esv27412 1 106779980 106783078 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10377 M 40 0 3 "" NA18508,NA18916,NA19257 nsv523065 1 106780559 106785646 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698751 M 2026 0 1 "" esv3369145 1 106820799 106820818 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9595979 M 185 1 0 "" NA12043 esv2473970 1 106833839 106835262 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5394122 M 1 0 1 "" NA18507 nsv830970 1 106860669 107022740 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448562 M 95 0 1 "" nsv521071 1 106893968 106902291 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697768 M 2026 0 1 "" nsv463050 1 106893968 106961501 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539081 M 1557 0 1 "" HGDP00025 nsv547326 1 106893968 106961501 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173099 M 17421 0 1 "" HGDP00025 esv22944 1 106896738 106903868 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10292 M 40 0 1 "" NA19147 nsv1003608 1 107001867 107036650 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486399 M 29084 0 1 "" esv27478 1 107002850 107012779 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12392 M 40 1 0 "" NA11995 esv25280 1 107022221 107026121 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12677,esv16989 M 40 2 2 "" NA11993,NA12044,NA18508,NA18916 esv2421451 1 107023241 107025005 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5138940,essv5055258,essv5075170,essv5147806,essv5020374,essv5083123,essv5073104,essv5107186,essv5055149,essv5005991,essv5118793,essv5071971,essv5115825,essv5146371,essv5069880,essv5137784,essv5156402,essv5146641,essv5139654,essv5145413,essv5078808,essv5026851,essv5008643,essv5031118,essv5011232,essv5076260,essv5159327,essv5038216,essv5102537,essv5065240,essv5117849 M 1184 0 31 "" NA18508,NA18859,NA18870,NA18916,NA18930,NA18933,NA19118,NA19140,NA19174,NA19178,NA19181,NA19185,NA19203,NA19213,NA19247,NA19249,NA19307,NA19440,NA19446,NA19681,NA19703,NA19705,NA19770,NA19908,NA19919,NA19982,NA20289,NA20341,NA20343,NA20359,NA21300 esv2764184 1 107023241 107025005 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005881,essv7005882,essv7005884,essv7005883,essv7005885 M 1109 0 5 "" RW_0003,RW_0048,RW_0528,RW_0529,RW_0637 nsv441706 1 107023241 107025005 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656717,nssv1656713,nssv1656716,nssv1656712,nssv1656715,nssv1656710,nssv1656714,nssv1656711 M 270 0 8 "" NA18508,NA18859,NA18870,NA19127,NA19140,NA19142,NA19203,NA19223 nsv513998 1 107023848 107024832 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2844370,nssv2844366,nssv2844369,nssv2844368,nssv2844371,nssv2844365,nssv2844374,nssv2844361,nssv2844362,nssv2844364,nssv2844367,nssv2844359,nssv2844360,nssv2844375,nssv2844372,nssv2844363,nssv2844373 M 2366 0 17 "" NA18508,NA18859,NA18870,NA18916,NA18930,NA18933,NA19118,NA19127,NA19140,NA19142,NA19174,NA19178,NA19181,NA19185,NA19223,NA19247,NA19249 dgv466n54 1 107044785 107115133 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547328,nsv547327 M 17421 0 2 "" 1782681096_A nsv463062 1 107044785 107115133 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539093 M 1557 0 1 "" 1782681096_A nsv547329 1 107081412 107295787 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720716 M 17421 1 0 "" esv274867 1 107133402 107141176 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585120,essv2585900 M 1250 1 1 "" nsv1008109 1 107146314 107179883 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494890 M 29084 0 1 "" nsv946116 1 107147220 107150043 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780812,nssv1778198,nssv1780816,nssv1778197,nssv1780799,nssv1778169,nssv1780818,nssv1778160,nssv1780811,nssv1778166,nssv1780825,nssv1778199,nssv1780810,nssv1778200,nssv1780804,nssv1780797,nssv1780817,nssv1778174,nssv1778203,nssv1778185,nssv1780813,nssv1778191,nssv1778202,nssv1780823,nssv1780802,nssv1778190,nssv1778204,nssv1778161,nssv1780801,nssv1778215,nssv1780828,nssv1778218,nssv1780821,nssv1778189,nssv1778208,nssv1778176,nssv1780805,nssv1778179,nssv1778210,nssv1778221,nssv1780803,nssv1778214,nssv1780798,nssv1778195,nssv1780806,nssv1778171,nssv1780809,nssv1780830,nssv1780808,nssv1778180,nssv1780800,nssv1778212,nssv1778209,nssv1778162,nssv1780826,nssv1778220,nssv1780814,nssv1778192,nssv1780807,nssv1778217,nssv1780819,nssv1778188,nssv1778205,nssv1780829,nssv1780815,nssv1778201,nssv1778207,nssv1778175,nssv1778206,nssv1778186,nssv1778211,nssv1778193,nssv1778183,nssv1780827,nssv1780820,nssv1778164,nssv1778172,nssv1778167,nssv1778216,nssv1778196,nssv1778187,nssv1778165,nssv1778168,nssv1778173,nssv1778163,nssv1778177,nssv1780824,nssv1778184,nssv1778194,nssv1780822,nssv1778159,nssv1778170,nssv1778182,nssv1778213,nssv1778181,nssv1778178,nssv1778219 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2254 1 107175823 107206654 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10960 M 9 1 0 "" NA15510 nsv265 1 107175823 107206654 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv265 M 1 1 0 "" NA15510 esv2758957 1 107285151 107642406 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757745,esv2756855 M 270 0 2 NTNG1,PRMT6 NA07019,NA07056 nsv518031 1 107309990 107317731 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694192 M 2026 0 1 "" nsv547330 1 107350268 107719842 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720717 M 17421 1 0 NTNG1,PRMT6 nsv508032 1 107389010 107395010 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618504 M 4 0 0 "" CHM nsv482070 1 107400932 107403437 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558431 M 1 1 0 PRMT6 KB1 nsv947440 1 107410256 107422754 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2763319 M 97 1 0 "" HGDP00998 nsv547331 1 107452235 107465188 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720718 M 17421 0 1 "" nsv830982 1 107453099 107636497 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448573 M 95 1 0 NTNG1 dgv467n54 1 107455743 107465188 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547332,nsv547333,nsv547334 M 17421 0 11 "" esv27941 1 107456827 107465258 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14176 M 40 0 1 "" NA12489 esv2762299 1 107457125 107465018 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6992556,essv6992578,essv6992545,essv6992589,essv6992567,essv6992600 M 1109 0 6 "" SW_0577,SW_0775,SW_1115,SW_1229,SW_1353,SW_1367 nsv523378 1 107457879 107460385 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699127 M 2026 0 1 "" esv33740 1 107458928 107464933 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101077 M 51 0 1 "" 21693 dgv468n54 1 107459495 107465188 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547336,nsv547335 M 17421 0 4 "" nsv1001678 1 107461893 107499183 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501027 M 29084 0 1 NTNG1 nsv478792 1 107502007 107502007 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014843 M 9 1 0 NTNG1 NA18507 nsv508033 1 107589244 107595244 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621476 M 4 0 0 NTNG1 NA15510 esv3893978 1 107616418 107638682 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25799023 M 3017 0 1 NTNG1 nsv521184 1 107691171 107700129 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv683970,nssv685593 M 2026 0 2 NTNG1 dgv248n100 1 107729317 108631134 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004696,nsv1000549,nsv1014119,nsv1003023 M 29084 4 0 MIR7852,NBPF4,NTNG1,SLC25A24,VAV3,VAV3-AS1 nsv830993 1 107785578 107958124 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448584 M 95 1 0 NTNG1,VAV3 nsv477247 1 107787724 107787724 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015020 M 9 1 0 NTNG1 NA18517 nsv946117 1 107849368 107850094 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1778242,nssv1780113,nssv1778223,nssv1780106,nssv1778238,nssv1780122,nssv1778236,nssv1780146,nssv1778241,nssv1780144,nssv1778230,nssv1778245,nssv1780155,nssv1780124,nssv1778233,nssv1780123,nssv1778224,nssv1780114,nssv1778225,nssv1780108,nssv1780149,nssv1780105,nssv1780154,nssv1780137,nssv1778246,nssv1780132,nssv1778227,nssv1778248,nssv1778231,nssv1780159,nssv1780151,nssv1780158,nssv1778228,nssv1780127,nssv1778240,nssv1780119,nssv1778229,nssv1780157,nssv1780148,nssv1780118,nssv1778234,nssv1780134,nssv1778250,nssv1780162,nssv1780153,nssv1780138,nssv1778226,nssv1778247,nssv1778239,nssv1780109,nssv1778244,nssv1780135,nssv1778235,nssv1780140,nssv1778253,nssv1780129,nssv1780152,nssv1780121,nssv1778232,nssv1780163,nssv1780147,nssv1780139,nssv1778243,nssv1780142,nssv1780150,nssv1780112,nssv1778237,nssv1778252,nssv1780156,nssv1780131,nssv1778251,nssv1778222,nssv1780104,nssv1780166,nssv1780107,nssv1780116,nssv1780141,nssv1780136,nssv1780126,nssv1780164,nssv1780160,nssv1778249,nssv1780110,nssv1780130,nssv1780115,nssv1780117,nssv1780120,nssv1778254,nssv1780161,nssv1778255,nssv1780125,nssv1780111,nssv1780133,nssv1780143,nssv1780165,nssv1780145,nssv1780128 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3310095 1 107943979 107943980 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837376,essv7837071 M 185 2 0 VAV3 NA19239,NA19240 esv3377289 1 107943980 107943990 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673738,essv8673739,essv8673740 M 185 3 0 VAV3 NA12892,NA19238,NA19240 esv3330588 1 107943981 107944000 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596013,essv9596035,essv9595990,essv9596002,essv9596024 M 185 5 0 VAV3 NA07347,NA12043,NA12234,NA12812,NA12873 esv3387276 1 107943984 107943990 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900895,essv8900923,essv8900928,essv8900877,essv8900899,essv8900898,essv8900875,essv8900902,essv8900874,essv8900938,essv8900916,essv8900937,essv8900897,essv8900913,essv8900885,essv8900940,essv8900909,essv8900915,essv8900868,essv8900933,essv8900904,essv8900918,essv8900901,essv8900879,essv8900921,essv8900887,essv8900881,essv8900941,essv8900888,essv8900878,essv8900871,essv8900935,essv8900876,essv8900907,essv8900934,essv8900882,essv8900924,essv8900926,essv8900893,essv8900908,essv8900896,essv8900931,essv8900930,essv8900927,essv8900905,essv8900873,essv8900922,essv8900883,essv8900920,essv8900912,essv8900929,essv8900906,essv8900911,essv8900932,essv8900939,essv8900917,essv8900894,essv8900910,essv8900872,essv8900890,essv8900884,essv8900870,essv8900886,essv8900889,essv8900919,essv8900900 M 185 66 0 VAV3 NA06986,NA07000,NA07051,NA07347,NA07357,NA10847,NA10851,NA11830,NA11831,NA11881,NA11894,NA11918,NA11931,NA11992,NA11994,NA12004,NA12043,NA12044,NA12045,NA12144,NA12154,NA12156,NA12249,NA12716,NA12717,NA12749,NA12750,NA18489,NA18501,NA18504,NA18505,NA18519,NA18522,NA18523,NA18537,NA18542,NA18550,NA18555,NA18558,NA18561,NA18562,NA18563,NA18570,NA18576,NA18582,NA18603,NA18609,NA18861,NA18870,NA18871,NA18907,NA18916,NA18940,NA18943,NA18944,NA18947,NA18949,NA18956,NA18964,NA18965,NA18973,NA19102,NA19114,NA19138,NA19147,NA19172 esv3303346 1 107943988 107943989 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7788636,essv7796978,essv7800347,essv7785851,essv7834093,essv7829271,essv7774484,essv7781916,essv7790602,essv7828779,essv7802580,essv7823449,essv7819270,essv7835961,essv7804587,essv7779476,essv7785478,essv7830442,essv7787859,essv7825106,essv7811793,essv7786195,essv7772251,essv7810242,essv7776400,essv7831805,essv7773957,essv7796696,essv7813463,essv7832720,essv7828547,essv7831337,essv7794109,essv7777823,essv7801895,essv7798755,essv7776588,essv7828075,essv7835062,essv7825412,essv7827229,essv7811234,essv7833483,essv7810967,essv7797627,essv7782050,essv7771904,essv7784575,essv7777473,essv7784487,essv7775755,essv7796353,essv7816850,essv7819487,essv7806111,essv7792683,essv7815294,essv7782699,essv7807547,essv7821121,essv7812030,essv7774940,essv7817013,essv7792074,essv7771170,essv7778482,essv7801184,essv7800719,essv7824027,essv7786947,essv7813823,essv7793067,essv7780901 M 185 73 0 VAV3 NA06986,NA07000,NA07051,NA07347,NA07357,NA10847,NA10851,NA11830,NA11831,NA11840,NA11881,NA11894,NA11918,NA11931,NA11992,NA11994,NA12004,NA12043,NA12044,NA12045,NA12144,NA12154,NA12156,NA12234,NA12249,NA12716,NA12717,NA12749,NA12750,NA12873,NA12892,NA18489,NA18501,NA18504,NA18505,NA18519,NA18522,NA18523,NA18537,NA18542,NA18550,NA18555,NA18558,NA18561,NA18562,NA18563,NA18570,NA18576,NA18582,NA18603,NA18609,NA18861,NA18870,NA18871,NA18907,NA18916,NA18940,NA18943,NA18944,NA18947,NA18949,NA18956,NA18964,NA18965,NA18973,NA19102,NA19114,NA19138,NA19141,NA19147,NA19172,NA19238,NA19240 nsv463073 1 107963023 107990381 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539104 M 1557 0 1 VAV3 1780854103_A nsv463084 1 107973826 107993450 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539115 M 1557 0 1 VAV3 HGDP00931 nsv547337 1 107973826 107993450 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173101 M 17421 0 1 VAV3 HGDP00931 esv25310 1 107976915 107977853 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14701 M 40 2 0 VAV3 NA12878,NA18909 nsv997312 1 108000801 108094148 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701151 M 29084 0 1 VAV3 nsv831004 1 108013195 108216400 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448629,nssv1448606,nssv1448617,nssv1448640,nssv1448651,nssv1448595 M 95 6 0 VAV3 nsv523448 1 108048376 108050302 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699205 M 2026 0 1 VAV3 esv2764218 1 108051805 108071653 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005888,essv7005887,essv7005886 M 1109 0 3 VAV3 RW_0021,RW_0269,RW_0583 esv3389211 1 108067539 108067938 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808878 M 185 1 0 VAV3 NA12878 nsv831015 1 108079886 108261551 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448662 M 95 1 0 MIR7852,VAV3 esv24324 1 108112593 108126983 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17715 M 40 0 1 VAV3 NA18523 nsv1011093 1 108118788 108563535 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494321 M 29084 1 0 MIR7852,SLC25A24,VAV3,VAV3-AS1 nsv524680 1 108120602 108556957 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700651 M 2026 1 0 MIR7852,SLC25A24,VAV3,VAV3-AS1 dgv469n54 1 108120602 108577887 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547338,nsv547339 M 17421 2 0 MIR7852,NBPF4,SLC25A24,VAV3,VAV3-AS1 dgv470n54 1 108203626 108206873 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547341,nsv547340 M 17421 0 5 VAV3 nsv823831 1 108204485 108207040 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1427271,nssv1434876 M 31 0 2 VAV3 AK8,NA18942 esv24698 1 108204507 108206926 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14173 M 40 0 2 VAV3 NA11995,NA12878 dgv471n54 1 108205563 108206541 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547345,nsv547344,nsv547343,nsv547346,nsv547342 M 17421 0 6 VAV3 dgv472n54 1 108205563 108206873 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547349,nsv547348,nsv547347,nsv547351,nsv547352 M 17421 0 73 VAV3 dgv473n54 1 108205563 108208349 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547350,nsv547353 M 17421 0 2 VAV3 nsv547354 1 108205979 108206611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720823,nssv720822 M 17421 0 2 VAV3 dgv474n54 1 108205979 108206873 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547357,nsv547355,nsv547356 M 17421 0 10 VAV3 esv33860 1 108279128 108280105 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv100815 M 51 1 0 VAV3 21656 nsv472134 1 108332152 108332152 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013321 M 9 1 0 VAV3-AS1 NA18555 esv2758958 1 108420397 108898201 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757746 M 270 112 1 NBPF4,NBPF6,SLC25A24 NA06985,NA06991,NA07022,NA07029,NA07034,NA07056,NA07348,NA10830,NA10838,NA10855,NA10856,NA10857,NA10860,NA11829,NA11840,NA11881,NA11882,NA12004,NA12005,NA12044,NA12144,NA12154,NA12234,NA12236,NA12249,NA12740,NA12752,NA12760,NA12762,NA12763,NA12812,NA12813,NA12814,NA12815,NA12864,NA12865,NA12872,NA12873,NA12874,NA18501,NA18504,NA18505,NA18508,NA18523,NA18524,NA18529,NA18537,NA18547,NA18558,NA18605,NA18608,NA18621,NA18622,NA18636,NA18853,NA18854,NA18855,NA18856,NA18912,NA18913,NA18944,NA18947,NA18949,NA18951,NA18952,NA18959,NA18967,NA18968,NA18969,NA18971,NA18974,NA18976,NA18978,NA18981,NA18987,NA19000,NA19007,NA19093,NA19094,NA19099,NA19100,NA19101,NA19102,NA19103,NA19116,NA19120,NA19127,NA19128,NA19129,NA19130,NA19138,NA19139,NA19141,NA19142,NA19144,NA19154,NA19159,NA19160,NA19161,NA19171,NA19173,NA19192,NA19194,NA19202,NA19203,NA19204,NA19205,NA19206,NA19210,NA19211,NA19221,NA19222,NA19223 nsv428179 1 108420397 108898201 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450875,nssv450864,nssv450886 M 62 3 0 NBPF4,NBPF6,SLC25A24 HGDP01088,NA18498,NA19108 nsv520953 1 108423485 108427470 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697706 M 2026 0 1 "" esv2762179 1 108448080 108459457 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005890 M 1109 0 1 "" RW_0228 dgv249n100 1 108448080 108465364 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002206,nsv1002495 M 29084 0 2 "" esv29350 1 108455818 108456365 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13956 M 40 1 0 "" NA19240 esv25151 1 108457769 108459322 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17650 M 40 0 1 "" NA18511 nsv517978 1 108484423 108505357 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695390 M 2026 0 1 SLC25A24 nsv1004890 1 108488956 108654795 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489262 M 29084 0 1 NBPF4,SLC25A24 nsv547358 1 108493305 108556134 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv720834 M 17421 1 0 SLC25A24 nsv1007150 1 108494257 108563535 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701152 M 29084 1 0 SLC25A24 nsv508459 1 108496167 108554472 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622774 M 4 0 1 SLC25A24 NA18994 esv22495 1 108497047 108498862 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11491 M 40 0 5 SLC25A24 NA12006,NA12749,NA18511,NA18517,NA19257 esv32800 1 108505758 108505853 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv100027,essv100668 M 51 0 2 SLC25A24 21656,22086 esv2763802 1 108512791 108787720 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6992622,essv6992634,essv6992656,essv6992645,essv6992611 M 1109 0 5 NBPF4,SLC25A24 SW_0789,SW_1031,SW_1302,SW_1334,SW_1539 nsv2265 1 108514072 108541777 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2265,nssv6789 M 9 0 2 SLC25A24 NA12156,NA18555 esv33273 1 108516143 108525759 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv96323,essv92579,essv94750,essv94036,essv93436,essv93255,essv97354,essv94921,essv98173 M 51 9 0 SLC25A24 21772,21791,21802,21879,22128,22170,22231,22233,22371 nsv526757 1 108526041 108690800 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703107 M 2026 0 1 NBPF4,SLC25A24 dgv475n54 1 108530007 108538635 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547361,nsv547360,nsv547362,nsv547359 M 17421 0 5 SLC25A24 esv32547 1 108533286 108538706 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99330,essv97784,essv94199,essv101361,essv97023,essv94547,essv96049,essv98049,essv94020,essv101476,essv95177,essv92614,essv101060,essv92730,essv99485,essv93381,essv93458,essv94909,essv96503,essv99020,essv99790,essv95794,essv95465,essv98526,essv101775,essv95279,essv96687,essv101131,essv96104,essv98288,essv100665 M 51 31 0 SLC25A24 21603,21618,21656,21693,21721,21772,21802,21805,21817,21847,21872,21909,21911,21932,21938,21944,22007,22011,22085,22086,22127,22128,22170,22231,22233,22259,22261,22275,22278,22335,22394 nsv10539 1 108533298 108539357 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv17417,nssv15447,nssv17096,nssv15448,nssv18073,nssv16090,nssv16100,nssv14425,nssv15101,nssv22084,nssv17751,nssv16099,nssv18779,nssv19110,nssv17412,nssv15099,nssv19754,nssv16111 M 31 17 1 SLC25A24 NA10839,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18563,NA18572,NA18853,NA18860,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv947441 1 108533308 108538700 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2757413,nssv2759899,nssv2759471,nssv2756983 M 97 0 4 SLC25A24 HGDP00456,HGDP00778,HGDP00998,HGDP01307 esv2498743 1 108534055 108538421 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5350861 M 1 0 1 SLC25A24 NA18507 esv2623047 1 108534110 108539310 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5296114 M 1 0 1 SLC25A24 NA18507 nsv820521 1 108534537 108538877 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420491 M 1 0 1 SLC25A24 NA10851 nsv823842 1 108534537 108539207 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431832 M 31 1 0 SLC25A24 AK20 esv9427 1 108534656 108538971 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31868 M 1 0 0 SLC25A24 esv2122744 1 108534692 108538941 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4743884 M 1 0 1 SLC25A24 NA18507 nsv823853 1 108534750 108540533 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1425515,nssv1440137,nssv1435670,nssv1436353,nssv1421463,nssv1432263,nssv1439475,nssv1427272,nssv1428836,nssv1440825,nssv1423136,nssv1432852,nssv1434877,nssv1438597,nssv1422383 M 31 0 15 SLC25A24 AK12,AK4,AK8,NA18537,NA18542,NA18552,NA18564,NA18566,NA18592,NA18942,NA18969,NA18972,NA18973,NA18997,NA18999 esv3739 1 108534810 108538892 CNV loss Wang_et_al_2008 18987735 Sequencing essv26180 M 1 0 1 SLC25A24 YH dgv5e180 1 108534817 108538783 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1001618,esv1006134 M 3 1 0 SLC25A24 HuRef dgv62n67 1 108534817 108538783 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823864,nsv823875 M 31 0 4 SLC25A24 AK16,NA18526,NA18570,NA18582 nsv819227 1 108534846 108538814 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419596 M 2 1 0 SLC25A24 AK1 nsv498678 1 108534847 108538775 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585390 M 9 0 1 SLC25A24 esv21858 1 108534878 108538928 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16368 M 40 29 1 SLC25A24 NA06985,NA07045,NA11993,NA11995,NA12004,NA12006,NA12044,NA12287,NA12489,NA12749,NA12776,NA12828,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 dgv476n54 1 108535014 108537388 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547365,nsv547363,nsv547364,nsv547366,nsv547372 M 17421 0 16 SLC25A24 dgv477n54 1 108535014 108538635 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547377,nsv547370,nsv547367,nsv547371,nsv547369,nsv547368,nsv547376,nsv547375,nsv547373,nsv547374 M 17421 0 173 SLC25A24 nsv433387 1 108535014 108538635 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463268 M 9 0 1 SLC25A24 NA18555 esv2421780 1 108535014 108539019 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5130733,essv5042860,essv5015301,essv5143520,essv5081637,essv5160401,essv5128298,essv5155442,essv5004508,essv5137191,essv5089122,essv5115018,essv5073818,essv5095637,essv5152620,essv5041851,essv5159450,essv5015697,essv5077559,essv5137278,essv5033009,essv5127411,essv5148341,essv5032904,essv5157480,essv5060998,essv5065903,essv5054354,essv5075555,essv5079209,essv5115241,essv5029109,essv5090371,essv5009780,essv5044600,essv5124181,essv5058809,essv5103223,essv5116495,essv5061207,essv5054831,essv5003838,essv5049249,essv5041203,essv5149215,essv5095614,essv5046902,essv5109745,essv5153518,essv5081166,essv5119091,essv5154466,essv5033807,essv5159045,essv5156733,essv5148711,essv5070936,essv5012367,essv5115596,essv5048672,essv5027861,essv5102143,essv5110938,essv5135350,essv5095160,essv5101054,essv5103936,essv5150135,essv5009427,essv5057710,essv5076808,essv5134523,essv5084213,essv5132100,essv5021063,essv5058439,essv5072825,essv5042464,essv5064482,essv5083634,essv5039723,essv5129451,essv5150934,essv5118053,essv5079002,essv5152616,essv5043112,essv5133770,essv5029079,essv5123829,essv5014099,essv5154786,essv5105446,essv5139263,essv5087498,essv5043616,essv5114242,essv5039808,essv5067225,essv5152975,essv5120028,essv5090247,essv5050904,essv5003099,essv5106430,essv5101088,essv5019893,essv5013741,essv5059507,essv5064873,essv5047097,essv5053057,essv5102509,essv5015611,essv5052290,essv5120340,essv5153609,essv5064823,essv5052923,essv5083189,essv5103986,essv5100273,essv5143447,essv5128572,essv5078199,essv5115861,essv5109299,essv5055138,essv5013608,essv5103862,essv5010863,essv5092597,essv5095735,essv5102860,essv5154385,essv5033771,essv5062749,essv5124049,essv5139223,essv5036682,essv5160467,essv5034178,essv5051550,essv5127832,essv5049858,essv5100821,essv5116807,essv5132482,essv5120385,essv5024273,essv5116944,essv5153912,essv5148998,essv5053622,essv5079515,essv5144765,essv5039174,essv5099629,essv5093306,essv5056264,essv5136926,essv5123581,essv5138164,essv5123753,essv5100685,essv5022301,essv5122030,essv5095062,essv5122157,essv5063663,essv5060393,essv5122131,essv5084950,essv5101614,essv5046854,essv5073121,essv5120200,essv5018579,essv5091894,essv5091970,essv5094503,essv5069873,essv5083726,essv5019899,essv5041420,essv5070485,essv5111154,essv5038932,essv5054004,essv5073541,essv5001919,essv5065056,essv5157972,essv5135318,essv5106227,essv5015641,essv5106612,essv5125919,essv5098251,essv5116414,essv5044993,essv5143312,essv5139050,essv5027589,essv5092987,essv5123986,essv5025648,essv5090893,essv5019004,essv5054957,essv5049591,essv5154516,essv5102872,essv5121365,essv5022805,essv5003192,essv5127748,essv5131649,essv5068522,essv5097215,essv5078261,essv5059780,essv5076571,essv5004012,essv5079133,essv5088956,essv5048743,essv5135147,essv5102127,essv5058272,essv5148328,essv5044942,essv5012833,essv5087293,essv5094683,essv5128987,essv5010597,essv5068508,essv5075327,essv5100951,essv5008986,essv5107938,essv5036360,essv5032032,essv5018520,essv5039849,essv5098382,essv5010880,essv5026226,essv5070681,essv5157246,essv5152935,essv5099398,essv5046454,essv5058701,essv5157400,essv5016279,essv5004916,essv5043620,essv5013588,essv5065297,essv5136386,essv5007560,essv5100505,essv5149780,essv5159486,essv5009428,essv5132125,essv5027486,essv5072035,essv5126116,essv5149762,essv5052875,essv5013815,essv5019488,essv5094502,essv5018282,essv5006771,essv5033857,essv5105066,essv5154128,essv5085906,essv5107562,essv5090860,essv5118986,essv5082076,essv5103271,essv5133744,essv5077099,essv5096248,essv5002545,essv5139708,essv5016156,essv5016779,essv5109681,essv5054958,essv5016668,essv5004071,essv5147287,essv5104081,essv5123246,essv5097912,essv5045038,essv5066460,essv5016543,essv5090826,essv5098318,essv5071752,essv5057210,essv5139283,essv5103777,essv5011792,essv5019424,essv5053916,essv5048894,essv5158712,essv5160106,essv5027143,essv5036650,essv5081887,essv5121257,essv5101425,essv5116551,essv5124892,essv5018598,essv5033238,essv5047320,essv5123001,essv5116976,essv5060712,essv5117044,essv5102595,essv5143559,essv5109164,essv5055886,essv5118486,essv5040198,essv5154236,essv5143045,essv5034102,essv5121590,essv5013964,essv5025583,essv5122260,essv5110687,essv5059982,essv5039167,essv5054384,essv5017919,essv5160910,essv5053504,essv5154601,essv5098882,essv5139114,essv5023660,essv5029610,essv5081633,essv5145792,essv5074258,essv5075909,essv5047256,essv5072668,essv5151620,essv5133411,essv5123904,essv5138185,essv5022483,essv5089374,essv5013482,essv5052834,essv5011628,essv5134367,essv5078540,essv5150917,essv5085713,essv5138788,essv5158969,essv5157704,essv5148388,essv5083200,essv5103675,essv5151526,essv5039001,essv5035760,essv5117230,essv5143068,essv5035808,essv5053763,essv5148223,essv5098019,essv5076760,essv5034874,essv5042436,essv5073509,essv5023662,essv5018252,essv5087255,essv5119249,essv5010906,essv5155466,essv5036047,essv5151226,essv5015522,essv5088565,essv5054666,essv5137912,essv5132921,essv5135558,essv5153546,essv5140680,essv5132679,essv5112154,essv5087606,essv5034206,essv5042345,essv5107060,essv5158229,essv5127439,essv5160504,essv5113366,essv5112772,essv5037901,essv5156312,essv5111929,essv5087325,essv5047441,essv5101921,essv5124058,essv5100038,essv5145005,essv5152153,essv5149440,essv5004481,essv5057439,essv5159849,essv5154863,essv5073662,essv5030826,essv5086648,essv5096552,essv5006679,essv5020030,essv5083303,essv5076562,essv5096493,essv5033757,essv5155574,essv5018316,essv5092644,essv5045972,essv5018100,essv5130900,essv5004465,essv5094904,essv5053041,essv5039936,essv5113544,essv5152774,essv5105156,essv5110847,essv5101981,essv5105621,essv5046644,essv5082682,essv5117736,essv5065148,essv5069358,essv5137172,essv5028178,essv5095718,essv5111013,essv5104830,essv5070549,essv5153229,essv5012017,essv5109724 M 1184 0 476 SLC25A24 NA06984,NA06993,NA07000,NA07014,NA07029,NA07031,NA07037,NA07051,NA07055,NA07345,NA07346,NA07347,NA07348,NA07357,NA10830,NA10831,NA10835,NA10843,NA10845,NA10847,NA10850,NA10853,NA10861,NA10863,NA10864,NA10865,NA11830,NA11891,NA11893,NA11894,NA11918,NA11919,NA11920,NA11931,NA11994,NA12003,NA12005,NA12056,NA12057,NA12146,NA12154,NA12155,NA12156,NA12234,NA12239,NA12248,NA12272,NA12282,NA12283,NA12336,NA12340,NA12342,NA12343,NA12383,NA12386,NA12399,NA12400,NA12546,NA12708,NA12716,NA12718,NA12748,NA12750,NA12753,NA12762,NA12763,NA12777,NA12801,NA12812,NA12814,NA12817,NA12827,NA12828,NA12829,NA12865,NA12874,NA12877,NA12878,NA12889,NA12890,NA12892,NA17965,NA17966,NA17968,NA17969,NA17970,NA17972,NA17976,NA17982,NA17983,NA17986,NA17987,NA17988,NA17990,NA17993,NA17997,NA17998,NA17999,NA18101,NA18102,NA18105,NA18107,NA18108,NA18109,NA18112,NA18118,NA18120,NA18122,NA18125,NA18128,NA18129,NA18131,NA18132,NA18133,NA18134,NA18135,NA18136,NA18138,NA18140,NA18144,NA18147,NA18149,NA18150,NA18151,NA18152,NA18153,NA18154,NA18155,NA18156,NA18158,NA18159,NA18161,NA18162,NA18166,NA18486,NA18497,NA18499,NA18506,NA18507,NA18526,NA18532,NA18534,NA18536,NA18537,NA18542,NA18543,NA18544,NA18545,NA18546,NA18548,NA18550,NA18552,NA18555,NA18558,NA18559,NA18562,NA18563,NA18564,NA18566,NA18570,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18594,NA18595,NA18596,NA18599,NA18603,NA18605,NA18608,NA18609,NA18610,NA18611,NA18613,NA18614,NA18615,NA18616,NA18618,NA18619,NA18620,NA18621,NA18623,NA18624,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18636,NA18637,NA18638,NA18639,NA18641,NA18642,NA18643,NA18645,NA18647,NA18670,NA18674,NA18682,NA18685,NA18694,NA18702,NA18740,NA18745,NA18748,NA18749,NA18757,NA18862,NA18867,NA18868,NA18869,NA18909,NA18913,NA18914,NA18917,NA18940,NA18942,NA18943,NA18944,NA18945,NA18946,NA18948,NA18952,NA18953,NA18954,NA18955,NA18960,NA18962,NA18964,NA18966,NA18967,NA18969,NA18970,NA18972,NA18973,NA18974,NA18975,NA18977,NA18978,NA18979,NA18990,NA18991,NA18994,NA18995,NA18997,NA18998,NA19001,NA19002,NA19005,NA19009,NA19010,NA19044,NA19046,NA19054,NA19056,NA19060,NA19062,NA19063,NA19064,NA19066,NA19067,NA19070,NA19074,NA19076,NA19078,NA19079,NA19080,NA19081,NA19083,NA19085,NA19087,NA19113,NA19115,NA19152,NA19154,NA19179,NA19182,NA19190,NA19191,NA19207,NA19208,NA19239,NA19248,NA19249,NA19308,NA19315,NA19316,NA19317,NA19328,NA19372,NA19383,NA19404,NA19445,NA19466,NA19467,NA19470,NA19474,NA19649,NA19651,NA19653,NA19656,NA19657,NA19658,NA19659,NA19660,NA19661,NA19662,NA19663,NA19665,NA19669,NA19671,NA19675,NA19676,NA19678,NA19679,NA19680,NA19684,NA19686,NA19700,NA19713,NA19714,NA19716,NA19718,NA19722,NA19724,NA19725,NA19726,NA19747,NA19749,NA19750,NA19751,NA19755,NA19756,NA19761,NA19762,NA19763,NA19773,NA19774,NA19775,NA19776,NA19777,NA19778,NA19779,NA19780,NA19782,NA19783,NA19784,NA19789,NA19790,NA19794,NA19795,NA19796,NA19914,NA19983,NA20126,NA20279,NA20282,NA20287,NA20288,NA20294,NA20301,NA20344,NA20345,NA20502,NA20504,NA20505,NA20506,NA20508,NA20509,NA20512,NA20516,NA20518,NA20527,NA20530,NA20542,NA20543,NA20544,NA20581,NA20582,NA20586,NA20761,NA20768,NA20771,NA20775,NA20785,NA20799,NA20802,NA20804,NA20805,NA20807,NA20808,NA20809,NA20812,NA20815,NA20845,NA20846,NA20849,NA20852,NA20853,NA20856,NA20859,NA20861,NA20866,NA20870,NA20873,NA20877,NA20879,NA20882,NA20883,NA20885,NA20887,NA20888,NA20889,NA20891,NA20894,NA20896,NA20897,NA20900,NA20903,NA20907,NA20909,NA20910,NA20911,NA21088,NA21090,NA21091,NA21092,NA21094,NA21097,NA21098,NA21099,NA21100,NA21103,NA21104,NA21105,NA21106,NA21107,NA21109,NA21111,NA21113,NA21115,NA21116,NA21117,NA21119,NA21123,NA21144,NA21308,NA21336,NA21371,NA21379,NA21381,NA21383,NA21388,NA21391,NA21447,NA21478,NA21480,NA21485,NA21487,NA21512,NA21514,NA21519,NA21529,NA21576,NA21597,NA21617,NA21635,NA21678,NA21683,NA21738 nsv513999 1 108535176 108538816 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2844843,nssv2844891,nssv2844850,nssv2844774,nssv2844876,nssv2844780,nssv2844834,nssv2844888,nssv2844814,nssv2844844,nssv2844785,nssv2844784,nssv2844869,nssv2844799,nssv2844819,nssv2844822,nssv2844777,nssv2844800,nssv2844803,nssv2844394,nssv2844770,nssv2844381,nssv2844833,nssv2844906,nssv2844813,nssv2844836,nssv2844863,nssv2844880,nssv2844805,nssv2844384,nssv2844823,nssv2844881,nssv2844839,nssv2844887,nssv2844391,nssv2844831,nssv2844811,nssv2844894,nssv2844889,nssv2844768,nssv2844845,nssv2844793,nssv2844859,nssv2844781,nssv2844779,nssv2844789,nssv2844856,nssv2844794,nssv2844802,nssv2844778,nssv2844809,nssv2844386,nssv2844905,nssv2844827,nssv2844817,nssv2844377,nssv2844842,nssv2844792,nssv2844838,nssv2844870,nssv2844790,nssv2844804,nssv2844858,nssv2844909,nssv2844395,nssv2844875,nssv2844828,nssv2844378,nssv2844782,nssv2844815,nssv2844798,nssv2844846,nssv2844857,nssv2844829,nssv2844396,nssv2844904,nssv2844902,nssv2844821,nssv2844854,nssv2844382,nssv2844387,nssv2844841,nssv2844380,nssv2844392,nssv2844860,nssv2844773,nssv2844795,nssv2844867,nssv2844855,nssv2844791,nssv2844832,nssv2844840,nssv2844865,nssv2844376,nssv2844808,nssv2844910,nssv2844893,nssv2844852,nssv2844776,nssv2844849,nssv2844389,nssv2844900,nssv2844861,nssv2844810,nssv2844895,nssv2844826,nssv2844882,nssv2844816,nssv2844772,nssv2844398,nssv2844898,nssv2844884,nssv2844390,nssv2844908,nssv2844879,nssv2844825,nssv2844807,nssv2844899,nssv2844907,nssv2844796,nssv2844866,nssv2844383,nssv2844388,nssv2844783,nssv2844873,nssv2844874,nssv2844897,nssv2844862,nssv2844820,nssv2844397,nssv2844901,nssv2844787,nssv2844877,nssv2844806,nssv2844812,nssv2844775,nssv2844786,nssv2844872,nssv2844883,nssv2844853,nssv2844830,nssv2844847,nssv2844771,nssv2844837,nssv2844886,nssv2844797,nssv2844801,nssv2844788,nssv2844892,nssv2844885,nssv2844878,nssv2844393,nssv2844385,nssv2844864,nssv2844890,nssv2844769,nssv2844824,nssv2844871,nssv2844896,nssv2844868,nssv2844835,nssv2844818,nssv2844851,nssv2844379,nssv2844903,nssv2844848 M 2366 0 166 SLC25A24 NA06984,NA06993,NA07000,NA07014,NA07031,NA07037,NA07048,NA07051,NA07055,NA07346,NA07347,NA07348,NA07357,NA10830,NA10831,NA10835,NA10843,NA10845,NA10847,NA10850,NA10851,NA10863,NA10864,NA11830,NA11893,NA11894,NA11918,NA11919,NA11920,NA11994,NA12005,NA12056,NA12146,NA12154,NA12155,NA12156,NA12234,NA12239,NA12248,NA12272,NA12282,NA12283,NA12336,NA12340,NA12343,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12546,NA12708,NA12716,NA12718,NA12748,NA12750,NA12753,NA12763,NA12777,NA12801,NA12812,NA12814,NA12817,NA12827,NA12828,NA12829,NA12874,NA12877,NA12878,NA12889,NA12890,NA12892,NA18486,NA18497,NA18499,NA18506,NA18507,NA18532,NA18537,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18620,NA18621,NA18624,NA18632,NA18633,NA18636,NA18637,NA18862,NA18867,NA18868,NA18869,NA18909,NA18940,NA18942,NA18945,NA18948,NA18952,NA18953,NA18960,NA18964,NA18966,NA18967,NA18969,NA18970,NA18972,NA18973,NA18974,NA18975,NA18978,NA18990,NA18991,NA18994,NA18995,NA18997,NA18998,NA18999,NA19003,NA19005,NA19113,NA19115,NA19152,NA19154,NA19179,NA19182,NA19190,NA19191,NA19207,NA19208,NA19239,NA19248,NA19249,NA21381,NA21383,NA21388,NA21391,NA21447,NA21478,NA21480,NA21485,NA21487,NA21512,NA21514,NA21635 dgv478n54 1 108535685 108537388 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547385,nsv547378 M 17421 0 6 SLC25A24 dgv479n54 1 108535685 108537819 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547379,nsv547386 M 17421 0 10 SLC25A24 dgv480n54 1 108535685 108538635 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547380,nsv547383,nsv547382,nsv547381,nsv547390,nsv547389,nsv547388,nsv547387,nsv547392,nsv547391,nsv547394,nsv547395 M 17421 0 34 SLC25A24 dgv481n54 1 108535685 108794611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547384,nsv547401 M 17421 0 3 NBPF4,NBPF6,SLC25A24 nsv442958 1 108535758 108539019 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1616849,nssv1616884,nssv1616917,nssv1616817,nssv1616801,nssv1616905,nssv1616919,nssv1616863,nssv1616882,nssv1616800,nssv1616907,nssv1616857,nssv1616873,nssv1616826,nssv1616910,nssv1616822,nssv1616812,nssv1616841,nssv1616806,nssv1616853,nssv1616821,nssv1616895,nssv1616862,nssv1616827,nssv1616829,nssv1616867,nssv1616901,nssv1616845,nssv1616814,nssv1616916,nssv1616918,nssv1616887,nssv1616870,nssv1616798,nssv1616855,nssv1616807,nssv1616816,nssv1616866,nssv1616811,nssv1616834,nssv1616864,nssv1616896,nssv1616848,nssv1616796,nssv1616833,nssv1616828,nssv1616825,nssv1616861,nssv1616871,nssv1616890,nssv1616894,nssv1616803,nssv1616809,nssv1616899,nssv1616904,nssv1616897,nssv1616850,nssv1616906,nssv1616820,nssv1616911,nssv1616877,nssv1616865,nssv1616876,nssv1616875,nssv1616872,nssv1616808,nssv1616839,nssv1616886,nssv1616912,nssv1616915,nssv1616837,nssv1616799,nssv1616908,nssv1616874,nssv1616898,nssv1616815,nssv1616797,nssv1616881,nssv1616818,nssv1616852,nssv1616832,nssv1616878,nssv1616900,nssv1616831,nssv1616892,nssv1616859,nssv1616804,nssv1616843,nssv1616909,nssv1616860,nssv1616805,nssv1616842,nssv1616883,nssv1616846,nssv1616889,nssv1616823,nssv1616903,nssv1616851,nssv1616840,nssv1616893,nssv1616854,nssv1616868,nssv1616819,nssv1616879,nssv1616838,nssv1616914,nssv1616888,nssv1616810,nssv1616844,nssv1616885,nssv1616856,nssv1616830 M 270 0 112 SLC25A24 NA06993,NA07000,NA07029,NA07048,NA07055,NA07345,NA07348,NA07357,NA10830,NA10831,NA10835,NA10847,NA10851,NA10861,NA10863,NA11830,NA11994,NA12003,NA12005,NA12056,NA12057,NA12146,NA12154,NA12155,NA12156,NA12234,NA12239,NA12248,NA12716,NA12750,NA12753,NA12762,NA12763,NA12801,NA12812,NA12814,NA12865,NA12874,NA12878,NA12892,NA18506,NA18507,NA18526,NA18532,NA18537,NA18540,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18620,NA18621,NA18623,NA18624,NA18632,NA18633,NA18636,NA18637,NA18862,NA18913,NA18914,NA18940,NA18942,NA18943,NA18944,NA18945,NA18948,NA18952,NA18953,NA18960,NA18964,NA18966,NA18967,NA18969,NA18970,NA18973,NA18974,NA18975,NA18978,NA18990,NA18991,NA18994,NA18995,NA18997,NA18998,NA18999,NA19003,NA19005,NA19152,NA19154,NA19207,NA19208,NA19239 nsv547393 1 108536218 108538072 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721075 M 17421 1 0 SLC25A24 nsv547396 1 108536334 108541228 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721081 M 17421 0 1 SLC25A24 dgv482n54 1 108536516 108538635 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547398,nsv547397 M 17421 0 11 SLC25A24 nsv946118 1 108557166 108559182 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780174,nssv1780216,nssv1780188,nssv1780197,nssv1780246,nssv1780205,nssv1780186,nssv1780219,nssv1780187,nssv1780212,nssv1780189,nssv1780236,nssv1780183,nssv1780221,nssv1780198,nssv1780223,nssv1780172,nssv1780214,nssv1780245,nssv1780213,nssv1780173,nssv1780218,nssv1780196,nssv1780230,nssv1780168,nssv1780231,nssv1780175,nssv1780192,nssv1780241,nssv1780203,nssv1780178,nssv1780233,nssv1780180,nssv1780202,nssv1780191,nssv1780199,nssv1780244,nssv1780210,nssv1780179,nssv1780226,nssv1780239,nssv1780167,nssv1780243,nssv1780201,nssv1780169,nssv1780211,nssv1780176,nssv1780200,nssv1780177,nssv1780225,nssv1780184,nssv1780209,nssv1780242,nssv1780227,nssv1780181,nssv1780215,nssv1780185,nssv1780234,nssv1780238,nssv1780232,nssv1780170,nssv1780194,nssv1780182,nssv1780228,nssv1780240,nssv1780193,nssv1780171,nssv1780235,nssv1780237,nssv1780217,nssv1780195,nssv1780206,nssv1780204,nssv1780222,nssv1780190,nssv1780208,nssv1780229,nssv1780207,nssv1780224,nssv1780220 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv23343 1 108561994 108898831 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11547,esv18355,esv13251,esv10264 M 40 33 3 NBPF4,NBPF6 NA06985,NA07037,NA11894,NA11931,NA11993,NA11995,NA12004,NA12044,NA12239,NA12287,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19240,NA19257 nsv946119 1 108565447 108590244 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780272,nssv1780291,nssv1780256,nssv1780304,nssv1780249,nssv1780270,nssv1780254,nssv1780280,nssv1780262,nssv1780308,nssv1780250,nssv1780320,nssv1780268,nssv1780288,nssv1780326,nssv1780306,nssv1780258,nssv1780340,nssv1780267,nssv1780277,nssv1780259,nssv1780296,nssv1780263,nssv1780337,nssv1780252,nssv1780303,nssv1780260,nssv1780298,nssv1780253,nssv1780289,nssv1780255,nssv1780293,nssv1780248,nssv1780297,nssv1780331,nssv1780335,nssv1780266,nssv1780273,nssv1780325,nssv1780294,nssv1780324,nssv1780341,nssv1780328,nssv1780290,nssv1780269,nssv1780287,nssv1780330,nssv1780334,nssv1780275,nssv1780282,nssv1780257,nssv1780285,nssv1780264,nssv1780302,nssv1780278,nssv1780313,nssv1780329,nssv1780321,nssv1780265,nssv1780315,nssv1780327,nssv1780342,nssv1780333,nssv1780300,nssv1780261,nssv1780292,nssv1780332,nssv1780301,nssv1780251,nssv1780247,nssv1780276,nssv1780307,nssv1780271,nssv1780336,nssv1780316,nssv1780299,nssv1780311,nssv1780338,nssv1780279,nssv1780305,nssv1780343,nssv1780309,nssv1780312,nssv1780295,nssv1780310,nssv1780286,nssv1780317,nssv1780339,nssv1780319,nssv1780283,nssv1780322,nssv1780318,nssv1780274,nssv1780284,nssv1780323,nssv1780314,nssv1780281 M 97 10 0 NBPF4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv10550 1 108574141 108575019 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv14737,nssv18081 M 31 0 2 NBPF4 NA11830,NA18860 nsv821352 1 108579288 108656868 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420502 M 1 0 1 NBPF4 NA10851 nsv945584 1 108588982 108590244 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571799,nssv2571823,nssv2571803,nssv2571862,nssv2571874,nssv2571840,nssv2571810,nssv2571836,nssv2571807,nssv2571839,nssv2571875,nssv2571864,nssv2571816,nssv2571866,nssv2571870,nssv2571858,nssv2571804,nssv2571837,nssv2571826,nssv2571854,nssv2571822,nssv2571834,nssv2571820,nssv2571825,nssv2571808,nssv2571849,nssv2571812,nssv2571867,nssv2571871,nssv2571852,nssv2571817,nssv2571850,nssv2571827,nssv2571843,nssv2571876,nssv2571838,nssv2571815,nssv2571842,nssv2571818,nssv2571856,nssv2571868,nssv2571835,nssv2571819,nssv2571832,nssv2571806,nssv2571853,nssv2571872,nssv2571824,nssv2571801,nssv2571821,nssv2571877,nssv2571846,nssv2571829,nssv2571861,nssv2571802,nssv2571831,nssv2571873,nssv2571855,nssv2571869,nssv2571859,nssv2571800,nssv2571860,nssv2571805,nssv2571833,nssv2571809,nssv2571865,nssv2571811,nssv2571857,nssv2571813,nssv2571847,nssv2571814,nssv2571848,nssv2571841,nssv2571830,nssv2571798,nssv2571851,nssv2571863,nssv2571828,nssv2571844,nssv2571845 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946120 1 108590244 108590942 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781347,nssv1780386,nssv1780351,nssv1780387,nssv1780369,nssv1780380,nssv1781345,nssv1780401,nssv1780363,nssv1780403,nssv1780359,nssv1780391,nssv1780356,nssv1780371,nssv1781343,nssv1780399,nssv1781346,nssv1780393,nssv1780364,nssv1780402,nssv1780360,nssv1780379,nssv1780375,nssv1780397,nssv1780365,nssv1781337,nssv1781344,nssv1780404,nssv1780353,nssv1780406,nssv1780349,nssv1780367,nssv1780372,nssv1780408,nssv1780350,nssv1780382,nssv1780345,nssv1780381,nssv1780352,nssv1780405,nssv1780368,nssv1780374,nssv1781342,nssv1780378,nssv1780373,nssv1780396,nssv1781340,nssv1780394,nssv1781341,nssv1780410,nssv1780354,nssv1780411,nssv1781339,nssv1780398,nssv1780361,nssv1780388,nssv1781338,nssv1780344,nssv1780362,nssv1780370,nssv1780346,nssv1780395,nssv1780366,nssv1780385,nssv1780347,nssv1780400,nssv1780357,nssv1780390,nssv1780355,nssv1780384,nssv1780358,nssv1780376,nssv1780348,nssv1780407,nssv1780377,nssv1780409,nssv1780389,nssv1780392,nssv1781336,nssv1780383 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv10561 1 108590638 108602669 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17742 M 31 1 0 "" NA18502 nsv946121 1 108590942 108656883 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781350,nssv1781351,nssv1781349,nssv1781357,nssv1781354,nssv1781348,nssv1781356,nssv1781352,nssv1781353,nssv1781355 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv483n54 1 108591047 108636136 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547399,nsv547403,nsv547402 M 17421 0 11 "" dgv484n54 1 108591047 108659426 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547404,nsv547400 M 17421 0 2 "" nsv10572 1 108604345 108654808 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv18433,nssv15442,nssv20084,nssv16755,nssv16434,nssv22433,nssv17426,nssv19109,nssv15778,nssv15431,nssv15097,nssv16420,nssv22414,nssv15756,nssv16430,nssv18768,nssv15429,nssv19440,nssv15752,nssv15422,nssv14405,nssv16441 M 31 21 0 "" NA07029,NA10839,NA10847,NA10863,NA11830,NA12740,NA12802,NA12872,NA18504,NA18517,NA18537,NA18564,NA18853,NA18942,NA18972,NA18975,NA19007,NA19144,NA19173,NA19221,NA19240 nsv7180 1 108619360 108728242 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6796 M 9 0 0 "" NA12156 dgv250n100 1 108630468 108896713 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998766,nsv1001874 M 29084 2 0 NBPF6 nsv510903 1 108636593 108746075 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624360,nssv621653 M 4 0 0 "" NA15510,NA18994 nsv499749 1 108647002 108727871 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585488 M 9 0 0 "" nsv1010071 1 108654781 108681118 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491791 M 29084 0 1 "" nsv463095 1 108655689 108690800 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539126 M 1557 0 1 "" HGDP00116 nsv2276 1 108681567 108812677 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5761,nssv10182 M 9 0 2 NBPF6 NA18956,NA19129 nsv946122 1 108714326 108727466 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781366,nssv1781410,nssv1781442,nssv1781407,nssv1781362,nssv1781404,nssv1781386,nssv1781395,nssv1781360,nssv1781398,nssv1781377,nssv1781383,nssv1781373,nssv1781433,nssv1781370,nssv1781423,nssv1781369,nssv1781414,nssv1781440,nssv1781430,nssv1781387,nssv1780530,nssv1781443,nssv1780526,nssv1781444,nssv1781427,nssv1781365,nssv1781403,nssv1781378,nssv1781381,nssv1781379,nssv1781428,nssv1781374,nssv1781388,nssv1781361,nssv1781431,nssv1781371,nssv1781402,nssv1781363,nssv1781419,nssv1781368,nssv1781445,nssv1781382,nssv1781411,nssv1781372,nssv1781390,nssv1781367,nssv1781425,nssv1781436,nssv1780529,nssv1781380,nssv1781399,nssv1781439,nssv1781384,nssv1781437,nssv1780528,nssv1781359,nssv1781415,nssv1781435,nssv1781432,nssv1781364,nssv1781396,nssv1781441,nssv1781417,nssv1781375,nssv1781420,nssv1781376,nssv1781409,nssv1781438,nssv1781426,nssv1781389,nssv1781429,nssv1781392,nssv1781422,nssv1781408,nssv1781434,nssv1781393,nssv1781394,nssv1781391,nssv1781424,nssv1781358,nssv1781413,nssv1780523,nssv1780524,nssv1781416,nssv1781418,nssv1780527,nssv1781446,nssv1781421,nssv1780525,nssv1781412,nssv1781385,nssv1781400,nssv1781406,nssv1781401,nssv1781405,nssv1781397 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821488 1 108714654 108815961 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420514 M 1 0 1 NBPF6 NA10851 nsv498679 1 108722664 108797155 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585391 M 9 0 1 NBPF6 nsv10583 1 108726961 108778323 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv20414,nssv15759,nssv19770,nssv16082,nssv16086,nssv22761,nssv16108,nssv19439,nssv14735,nssv22742,nssv15427,nssv17756,nssv18763,nssv16412,nssv16750,nssv19098,nssv16760,nssv16771,nssv15772,nssv15761,nssv17085,nssv16764 M 31 21 0 "" NA07029,NA10839,NA10847,NA10863,NA11830,NA12740,NA12802,NA12872,NA18504,NA18517,NA18537,NA18564,NA18853,NA18942,NA18972,NA18975,NA19007,NA19144,NA19173,NA19221,NA19240 nsv823886 1 108727636 108815961 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423137 M 31 1 0 NBPF6 NA18999 nsv514911 1 108727832 108778776 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2846398,nssv2846369,nssv2846404,nssv2846366,nssv2846401,nssv2846367,nssv2846377,nssv2846368,nssv2846400,nssv2846371,nssv2846389,nssv2846316,nssv2846390,nssv2844983,nssv2846380,nssv2844942,nssv2846384,nssv2844913,nssv2846394,nssv2845016,nssv2846408,nssv2845091,nssv2846387,nssv2845099,nssv2846402,nssv2845004,nssv2846403,nssv2844953,nssv2846373,nssv2845041,nssv2846379,nssv2846253,nssv2846399,nssv2845036,nssv2846411,nssv2844928,nssv2846378,nssv2844988,nssv2846410,nssv2846288,nssv2846385,nssv2845039,nssv2846374,nssv2844915,nssv2846376,nssv2845136,nssv2846381,nssv2846280,nssv2846391,nssv2846310,nssv2846413,nssv2844956,nssv2846388,nssv2845015,nssv2846372,nssv2846247,nssv2846386,nssv2846278,nssv2846392,nssv2845000,nssv2846383,nssv2846266,nssv2846407,nssv2846337,nssv2846382,nssv2846258,nssv2846412,nssv2846254,nssv2846409,nssv2844935,nssv2846393,nssv2845128,nssv2846396,nssv2845003,nssv2846406,nssv2844963,nssv2846395,nssv2846255,nssv2846397,nssv2846246,nssv2846405,nssv2845067,nssv2846375,nssv2845075,nssv2845080,nssv2844954,nssv2844958,nssv2846294,nssv2846277,nssv2844962,nssv2846297,nssv2844943,nssv2845076,nssv2846299,nssv2846327,nssv2846271,nssv2844930,nssv2844974,nssv2845021,nssv2845120,nssv2846245,nssv2845025,nssv2846323,nssv2844970,nssv2845023,nssv2844957,nssv2844984,nssv2846350,nssv2844992,nssv2846267,nssv2845035,nssv2846364,nssv2846311,nssv2845118,nssv2845109,nssv2845083,nssv2845089,nssv2845097,nssv2846248,nssv2846348,nssv2844917,nssv2846339,nssv2844994,nssv2845123,nssv2846362,nssv2845122,nssv2845056,nssv2846353,nssv2844939,nssv2844947,nssv2846262,nssv2846289,nssv2846343,nssv2845105,nssv2844981,nssv2844919,nssv2846265,nssv2845064,nssv2846273,nssv2846252,nssv2845095,nssv2846244,nssv2844968,nssv2845111,nssv2846270,nssv2845096,nssv2846338,nssv2845038,nssv2846342,nssv2845057,nssv2846346,nssv2846283,nssv2846293,nssv2845110,nssv2844933,nssv2844948,nssv2845018,nssv2846257,nssv2845062,nssv2846322,nssv2845092,nssv2845093,nssv2846312,nssv2846256,nssv2846303,nssv2846268,nssv2844991,nssv2844946,nssv2846287,nssv2845077,nssv2845034,nssv2846329,nssv2846296,nssv2844990,nssv2845030,nssv2846321,nssv2846307,nssv2845130,nssv2846330,nssv2845059,nssv2844949,nssv2846354,nssv2845072,nssv2846300,nssv2846332,nssv2845085,nssv2844985,nssv2845043,nssv2844978,nssv2844995,nssv2844961,nssv2844975,nssv2844944,nssv2846314,nssv2845020,nssv2846301,nssv2846335,nssv2845107,nssv2845117,nssv2845112,nssv2844938,nssv2845071,nssv2846292,nssv2845104,nssv2845011,nssv2846290,nssv2845086,nssv2845129,nssv2845108,nssv2845050,nssv2845125,nssv2845135,nssv2844980,nssv2844918,nssv2845048,nssv2845119,nssv2845061,nssv2846279,nssv2845065,nssv2846349,nssv2846325,nssv2846326,nssv2846331,nssv2846317,nssv2845014,nssv2846333,nssv2844977,nssv2844924,nssv2846356,nssv2846286,nssv2844952,nssv2845087,nssv2845131,nssv2844998,nssv2845033,nssv2845053,nssv2844945,nssv2846336,nssv2845094,nssv2844960,nssv2846302,nssv2846365,nssv2844936,nssv2844964,nssv2846315,nssv2846249,nssv2845031,nssv2846345,nssv2846341,nssv2845116,nssv2845008,nssv2844999,nssv2845001,nssv2846259,nssv2845044,nssv2845100,nssv2844911,nssv2845084,nssv2844997,nssv2844912,nssv2846357,nssv2845074,nssv2844979,nssv2845026,nssv2845040,nssv2844950,nssv2845012,nssv2844929,nssv2846275,nssv2846282,nssv2844941,nssv2846298,nssv2844965,nssv2844940,nssv2846269,nssv2844993,nssv2844927,nssv2845079,nssv2846261,nssv2846274,nssv2845124,nssv2846309,nssv2845007,nssv2846285,nssv2844951,nssv2845106,nssv2844987,nssv2845098,nssv2846251,nssv2845054,nssv2845005,nssv2845058,nssv2845103,nssv2844914,nssv2844966,nssv2846319,nssv2845049,nssv2846324,nssv2845009,nssv2845019,nssv2845127,nssv2845022,nssv2846359,nssv2845010,nssv2846347,nssv2844972,nssv2845051,nssv2846306,nssv2846370,nssv2844923,nssv2846308,nssv2846328,nssv2846260,nssv2845078,nssv2844934,nssv2846355,nssv2846281,nssv2845082,nssv2845032,nssv2845068,nssv2844973,nssv2846334,nssv2845046,nssv2845114,nssv2845115,nssv2844969,nssv2844971,nssv2846264,nssv2845081,nssv2845102,nssv2845045,nssv2846318,nssv2846284,nssv2846276,nssv2844921,nssv2845029,nssv2846295,nssv2845073,nssv2844926,nssv2846320,nssv2845052,nssv2844922,nssv2846352,nssv2845132,nssv2846360,nssv2845028,nssv2845037,nssv2845055,nssv2845002,nssv2846304,nssv2844920,nssv2845066,nssv2846263,nssv2845042,nssv2846344,nssv2846340,nssv2845069,nssv2844989,nssv2845060,nssv2846358,nssv2844932,nssv2845126,nssv2844996,nssv2845133,nssv2844967,nssv2844959,nssv2844955,nssv2846361,nssv2845101,nssv2845047,nssv2846363,nssv2845113,nssv2844937,nssv2845027,nssv2846272,nssv2845017,nssv2846291,nssv2845090,nssv2845121,nssv2846313,nssv2845024,nssv2846351,nssv2845134,nssv2846250,nssv2844976,nssv2845070,nssv2844986,nssv2845063,nssv2844931,nssv2845013,nssv2846305,nssv2844925,nssv2844916,nssv2844982,nssv2845006,nssv2845088 M 2366 390 6 "" NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07019,NA07022,NA07031,NA07034,NA07056,NA07346,NA07348,NA07349,NA07357,NA07435,NA10830,NA10835,NA10836,NA10838,NA10839,NA10840,NA10843,NA10845,NA10847,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12044,NA12045,NA12056,NA12058,NA12144,NA12146,NA12154,NA12234,NA12236,NA12239,NA12249,NA12264,NA12273,NA12274,NA12275,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12740,NA12748,NA12749,NA12752,NA12753,NA12760,NA12761,NA12763,NA12767,NA12775,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12890,NA12891,NA12892,NA18484,NA18485,NA18487,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18537,NA18542,NA18545,NA18547,NA18550,NA18555,NA18558,NA18564,NA18570,NA18571,NA18573,NA18576,NA18582,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18621,NA18622,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18861,NA18863,NA18867,NA18870,NA18873,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18917,NA18923,NA18924,NA18925,NA18930,NA18934,NA18935,NA18940,NA18942,NA18947,NA18948,NA18949,NA18952,NA18956,NA18959,NA18960,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18981,NA18987,NA18991,NA18994,NA18995,NA18997,NA18999,NA19000,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19114,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19137,NA19138,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19236,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21316,NA21317,NA21359,NA21360,NA21361,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21391,NA21399,NA21400,NA21403,NA21404,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21523,NA21525,NA21583,NA21599,NA21600,NA21601,NA21608,NA21634,NA21635,NA21636,NA21648,NA21686,NA21718 nsv946123 1 108728510 108778772 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780533,nssv1780531,nssv1780532,nssv1780535,nssv1780537,nssv1780534,nssv1780539,nssv1780540,nssv1780536,nssv1780538 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2764181 1 108729983 108787720 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005893,essv7005894,essv7005892,essv7005891 M 1109 0 4 "" RW_0057,RW_0098,RW_0510,RW_0564 nsv441707 1 108729983 108787720 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1656722,nssv1656720,nssv1656721,nssv1656725,nssv1656724,nssv1656718,nssv1656719,nssv1656723 M 270 2 6 "" NA11840,NA11995,NA12815,NA18603,NA18945,NA18948,NA18956,NA19205 esv3893990 1 108769902 108792258 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25799197,essv25801662,essv25780154,essv25798990 M 3017 0 4 "" dgv485n54 1 108777582 108792258 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547406,nsv547405,nsv547407 M 17421 0 5 "" dgv486n54 1 108777582 108797533 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547408,nsv547409 M 17421 0 2 NBPF6 nsv10594 1 108779449 108792237 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv18072 M 31 1 0 "" NA18502 nsv946124 1 108779709 108815086 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780548,nssv1780611,nssv1780566,nssv1780579,nssv1780545,nssv1780596,nssv1780620,nssv1780580,nssv1780626,nssv1780585,nssv1780555,nssv1780589,nssv1780570,nssv1780609,nssv1780619,nssv1780606,nssv1780556,nssv1780630,nssv1780551,nssv1780567,nssv1780557,nssv1780628,nssv1780546,nssv1780581,nssv1780547,nssv1780587,nssv1780542,nssv1780591,nssv1780561,nssv1780583,nssv1780560,nssv1780576,nssv1780554,nssv1780597,nssv1780622,nssv1780605,nssv1780569,nssv1780629,nssv1780572,nssv1780593,nssv1780627,nssv1780637,nssv1780565,nssv1780564,nssv1780624,nssv1780577,nssv1780544,nssv1780594,nssv1780621,nssv1780571,nssv1780563,nssv1780608,nssv1780558,nssv1780600,nssv1780625,nssv1780612,nssv1780549,nssv1780617,nssv1780559,nssv1780541,nssv1780562,nssv1780634,nssv1780550,nssv1780601,nssv1780553,nssv1780584,nssv1780543,nssv1780578,nssv1780623,nssv1780590,nssv1780552,nssv1780582,nssv1780618,nssv1780615,nssv1780613,nssv1780607,nssv1780573,nssv1780588,nssv1780603,nssv1780635,nssv1780592,nssv1780616,nssv1780574,nssv1780636,nssv1780575,nssv1780604,nssv1780595,nssv1780614,nssv1780633,nssv1780598,nssv1780568,nssv1780631,nssv1780586,nssv1780602,nssv1780599,nssv1780610,nssv1780632 M 97 10 0 NBPF6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547410 1 108780003 108797061 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721115 M 17421 1 0 NBPF6 esv3391223 1 108794452 108795950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691743 M 185 1 0 NBPF6 NA19239 nsv10606 1 108807612 108808491 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv18441,nssv15757 M 31 0 2 NBPF6 NA11830,NA18860 nsv547411 1 108826232 108827618 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721116 M 17421 0 1 "" esv1030322 1 108826536 108827814 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3641112 M 2 0 1 "" HuRef nsv547412 1 108826709 108827314 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721117 M 17421 0 1 "" nsv946126 1 108845603 108853089 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780663,nssv1780707,nssv1780657,nssv1780685,nssv1781645,nssv1780711,nssv1780651,nssv1780678,nssv1780650,nssv1780702,nssv1780718,nssv1780672,nssv1780715,nssv1780700,nssv1780667,nssv1780686,nssv1780652,nssv1780703,nssv1781647,nssv1781655,nssv1780644,nssv1780638,nssv1780658,nssv1780695,nssv1780660,nssv1781657,nssv1780654,nssv1781653,nssv1780662,nssv1780682,nssv1780649,nssv1780677,nssv1780646,nssv1780684,nssv1780641,nssv1780665,nssv1780643,nssv1781652,nssv1781644,nssv1781649,nssv1780642,nssv1780698,nssv1780666,nssv1780709,nssv1780639,nssv1780688,nssv1780719,nssv1780675,nssv1780648,nssv1781656,nssv1780645,nssv1780691,nssv1781646,nssv1780712,nssv1780659,nssv1780690,nssv1780716,nssv1780680,nssv1780655,nssv1780696,nssv1780717,nssv1780670,nssv1780669,nssv1780694,nssv1781648,nssv1780681,nssv1780647,nssv1780697,nssv1780656,nssv1780701,nssv1780653,nssv1780706,nssv1780640,nssv1781658,nssv1780705,nssv1780713,nssv1780704,nssv1780687,nssv1780710,nssv1780668,nssv1781651,nssv1780699,nssv1780671,nssv1780676,nssv1780679,nssv1780661,nssv1780674,nssv1780708,nssv1780714,nssv1780664,nssv1780692,nssv1780673,nssv1780683,nssv1780689,nssv1780693,nssv1781654,nssv1781650 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1009643 1 108919426 108925313 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564589 M 3 0 1 FAM102B HuRef esv1151090 1 109020100 109020100 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3963317 M 2 1 0 "" HuRef nsv823897 1 109022955 109024181 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1433434 M 31 0 1 "" NA18526 esv1488051 1 109033755 109033755 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4345281 M 2 1 0 "" HuRef esv1070190 1 109116132 109116184 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3679771 M 2 0 1 STXBP3 HuRef nsv947442 1 109118606 109125644 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761622 M 97 1 0 STXBP3 HGDP00778 nsv823908 1 109137950 109138550 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428039,nssv1429573 M 31 0 2 STXBP3 AK10,AK14 nsv2287 1 109142222 109184766 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2274 M 9 0 1 AKNAD1,STXBP3 NA18555 nsv1013192 1 109147238 109212420 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496940 M 29084 1 0 AKNAD1,SPATA42,STXBP3 esv29430 1 109150446 109151653 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15955 M 40 0 1 STXBP3 NA12004 dgv487n54 1 109150467 109151125 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547414,nsv547413,nsv547415 M 17421 0 4 STXBP3 nsv463106 1 109157885 109173397 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539136 M 1557 0 1 AKNAD1 HGDP01275 nsv547416 1 109157885 109173397 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173102 M 17421 0 1 AKNAD1 HGDP01275 nsv526819 1 109167809 109178806 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703173 M 2026 0 1 AKNAD1 nsv521427 1 109168077 109173397 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698036 M 2026 0 1 AKNAD1 esv7631 1 109168396 109173634 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30072 M 1 0 0 AKNAD1 dgv63n67 1 109168508 109173417 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823921,nsv823932 M 31 0 2 AKNAD1 AK10,NA18951 esv26096 1 109168559 109173476 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16465 M 40 0 1 AKNAD1 NA12004 dgv488n54 1 109169467 109173397 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547419,nsv547418,nsv547417,nsv547422,nsv547420,nsv547421 M 17421 0 43 AKNAD1 1780854202_A esv2421353 1 109169467 109173397 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5008516,essv5054891,essv5065722,essv5159865,essv5056413,essv5142201,essv5020970,essv5110533,essv5033962,essv5068783,essv5089797,essv5153003,essv5140942,essv5094406,essv5067223,essv5146529,essv5069040,essv5095799,essv5031138,essv5100902,essv5066389,essv5112507,essv5048979,essv5045867,essv5014428,essv5061750,essv5103096,essv5016478,essv5096435,essv5043964,essv5012533,essv5112457,essv5060213,essv5160836,essv5130854,essv5105960,essv5094933,essv5071026,essv5134466,essv5012106,essv5132222,essv5032714,essv5115093,essv5160489,essv5105605,essv5076144,essv5117907,essv5057298,essv5041592,essv5019909,essv5154353,essv5006830,essv5037530,essv5085169,essv5129397,essv5066928,essv5134063,essv5007791,essv5102638,essv5134372,essv5100325,essv5126334,essv5096612,essv5036854,essv5021635,essv5085376,essv5114431,essv5135718,essv5021695,essv5112275,essv5032395,essv5057130,essv5071228,essv5117030,essv5094962,essv5126251,essv5129649,essv5152397,essv5051151,essv5048262,essv5101247 M 1184 0 81 AKNAD1 NA10838,NA10843,NA11919,NA17969,NA18132,NA18134,NA18149,NA18157,NA18555,NA18559,NA18563,NA18570,NA18573,NA18610,NA18616,NA18618,NA18624,NA18626,NA18643,NA18674,NA18685,NA18704,NA18748,NA18940,NA18944,NA18951,NA18961,NA18962,NA18970,NA18978,NA18987,NA18995,NA18998,NA19009,NA19010,NA19044,NA19054,NA19065,NA19068,NA19075,NA19079,NA19080,NA19081,NA19084,NA19085,NA19086,NA19651,NA19653,NA19656,NA19725,NA19726,NA19727,NA19755,NA20539,NA20765,NA20772,NA20792,NA20804,NA20862,NA20898,NA20910,NA21086,NA21101,NA21103,NA21115,NA21142,NA21307,NA21309,NA21312,NA21365,NA21366,NA21370,NA21435,NA21440,NA21453,NA21455,NA21457,NA21617,NA21683,NA21693,NA21825 nsv463117 1 109169467 109173397 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539147 M 1557 0 1 AKNAD1 1780854202_A nsv818322 1 109169467 109173397 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417609 M 112 0 1 AKNAD1 NA18978 nsv517381 1 109169467 109187989 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv677315,nssv667589,nssv668325,nssv680529,nssv675068,nssv654796,nssv687426,nssv699178,nssv692506,nssv691765,nssv686059,nssv668838,nssv659552,nssv677839,nssv684418,nssv706005,nssv654981,nssv651861,nssv654880,nssv688606,nssv669266,nssv677956,nssv678932,nssv655959,nssv693128,nssv680313,nssv685328 M 2026 0 27 AKNAD1 nsv823943 1 109171321 109173417 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434183 M 31 0 1 AKNAD1 NA18570 dgv489n54 1 109171438 109173397 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547424,nsv547423 M 17421 0 2 AKNAD1 nsv1005738 1 109212420 109261824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501668 M 29084 0 1 GPSM2 dgv15n21 1 109217748 109285290 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv517523,nsv527447 M 2026 6 0 CLCC1,GPSM2 nsv547425 1 109217748 109379973 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721166 M 17421 1 0 CLCC1,GPSM2,WDR47 nsv831026 1 109268856 109463759 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448684,nssv1448695,nssv1448673 M 95 0 3 C1orf194,CLCC1,GPSM2,KIAA1324,SCARNA2,TAF13,TMEM167B,WDR47 dgv251n100 1 109274296 109299656 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000677,nsv1001314 M 29084 0 2 CLCC1,GPSM2 nsv526049 1 109274577 109285498 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702286 M 2026 0 1 CLCC1 esv2760082 1 109294422 109311205 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005930,essv7005920,essv7005909,essv7005941,essv7005932,essv7005949,essv7005905,essv7005903,essv7005947,essv7005901,essv7005906,essv7005895,essv7005937,essv7005915,essv7005916,essv7005927,essv7005904,essv7005919,essv7005921,essv7005902,essv7005943,essv7005908,essv7005897,essv7005913,essv7005946,essv7005926,essv7005934,essv7005940,essv7005923,essv7005899,essv7005925,essv7005918,essv7005914,essv7005912,essv7005898,essv7005928,essv7005935,essv7005907,essv7005896,essv7005929,essv7005948,essv7005931,essv7005924,essv7005942,essv7005938,essv7005910,essv7005917,essv7005945,essv7005939,essv7005936 M 1109 0 50 CLCC1 RW_0002,RW_0050,RW_0062,RW_0068,RW_0084,RW_0088,RW_0090,RW_0103,RW_0122,RW_0169,RW_0171,RW_0173,RW_0176,RW_0177,RW_0184,RW_0188,RW_0193,RW_0203,RW_0215,RW_0216,RW_0221,RW_0223,RW_0248,RW_0251,RW_0268,RW_0274,RW_0278,RW_0307,RW_0314,RW_0320,RW_0331,RW_0356,RW_0359,RW_0504,RW_0508,RW_0515,RW_0524,RW_0527,RW_0530,RW_0546,RW_0553,RW_0555,RW_0558,RW_0586,RW_0599,RW_0604,RW_0615,RW_0643,RW_0646,RW_0666 nsv437236 1 109297398 109321084 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467117 M 60 0 1 CLCC1,WDR47 NA18860 esv24963 1 109298220 109302661 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13669 M 40 0 2 CLCC1 NA18502,NA19114 nsv441708 1 109298377 109299668 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656736,nssv1656735,nssv1656726,nssv1656730,nssv1656727,nssv1656731,nssv1656734,nssv1656729,nssv1656732,nssv1656733,nssv1656728 M 270 0 11 CLCC1 NA18502,NA18859,NA18860,NA18871,NA18872,NA19137,NA19138,NA19139,NA19209,NA19210,NA19211 esv2421924 1 109298377 109301962 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5134461,essv5033590,essv5079512,essv5153621,essv5070001,essv5074040,essv5052229,essv5096607,essv5027608,essv5083931,essv5012665,essv5114864,essv5043612,essv5099429,essv5017236,essv5098871,essv5018396,essv5137774,essv5109377,essv5112787,essv5049813,essv5149309,essv5015142,essv5092640,essv5159876,essv5114686,essv5039568,essv5141923,essv5100549,essv5086928,essv5117716,essv5114655,essv5071746,essv5060221,essv5131746,essv5003889,essv5103536,essv5122171,essv5035709,essv5026934,essv5114198,essv5005380,essv5003675,essv5114744,essv5072581,essv5121989,essv5076648,essv5128713,essv5136531,essv5118813,essv5097069,essv5074948,essv5072383,essv5126042,essv5031754,essv5121724,essv5023576,essv5038023,essv5079558,essv5144688,essv5107387,essv5049352,essv5070949,essv5138068,essv5086870,essv5138698,essv5084539,essv5030596 M 1184 0 68 CLCC1 NA18859,NA18860,NA18871,NA18872,NA18934,NA18935,NA19035,NA19041,NA19114,NA19118,NA19122,NA19123,NA19137,NA19138,NA19139,NA19174,NA19175,NA19176,NA19209,NA19210,NA19211,NA19256,NA19258,NA19307,NA19328,NA19375,NA19403,NA19430,NA19436,NA19438,NA19440,NA19443,NA19446,NA19470,NA19474,NA19700,NA19702,NA19819,NA19828,NA19904,NA19916,NA19918,NA20287,NA20288,NA20289,NA20332,NA20333,NA20341,NA20345,NA20348,NA21311,NA21312,NA21313,NA21314,NA21320,NA21359,NA21361,NA21382,NA21383,NA21423,NA21438,NA21439,NA21447,NA21479,NA21648,NA21678,NA21685,NA21686 nsv514000 1 109298688 109299640 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2846442,nssv2846431,nssv2846439,nssv2846445,nssv2846435,nssv2846428,nssv2846434,nssv2846444,nssv2846427,nssv2846425,nssv2846416,nssv2846432,nssv2846447,nssv2846430,nssv2846437,nssv2846414,nssv2846438,nssv2846446,nssv2846440,nssv2846415,nssv2846422,nssv2846443,nssv2846419,nssv2846441,nssv2846424,nssv2846423,nssv2846433,nssv2846421,nssv2846420,nssv2846417,nssv2846418,nssv2846436,nssv2846429,nssv2846426 M 2366 0 34 CLCC1 NA18859,NA18860,NA18871,NA18872,NA18934,NA18935,NA19114,NA19118,NA19122,NA19123,NA19137,NA19138,NA19174,NA19175,NA19209,NA19210,NA19211,NA19256,NA19258,NA21310,NA21312,NA21313,NA21359,NA21361,NA21382,NA21383,NA21423,NA21425,NA21438,NA21439,NA21447,NA21479,NA21648,NA21686 nsv946127 1 109333762 109339144 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781684,nssv1781707,nssv1781743,nssv1781695,nssv1781661,nssv1781693,nssv1781678,nssv1781692,nssv1781679,nssv1781697,nssv1781739,nssv1781726,nssv1781675,nssv1781752,nssv1781741,nssv1781719,nssv1781680,nssv1781711,nssv1781690,nssv1781686,nssv1781664,nssv1781754,nssv1781662,nssv1781751,nssv1781688,nssv1781682,nssv1781666,nssv1781722,nssv1781683,nssv1781725,nssv1781667,nssv1781721,nssv1781687,nssv1781749,nssv1781673,nssv1781659,nssv1781663,nssv1781731,nssv1781674,nssv1781746,nssv1781737,nssv1781698,nssv1781744,nssv1781727,nssv1781669,nssv1781716,nssv1781660,nssv1781715,nssv1781672,nssv1781701,nssv1781665,nssv1781702,nssv1781668,nssv1781730,nssv1781676,nssv1781728,nssv1781670,nssv1781723,nssv1781738,nssv1781709,nssv1781740,nssv1781689,nssv1781681,nssv1781705,nssv1781677,nssv1781747,nssv1781742,nssv1781724,nssv1781736,nssv1781718,nssv1781671,nssv1781710,nssv1781745,nssv1781733,nssv1781696,nssv1781734,nssv1781753,nssv1781720,nssv1781732,nssv1781714,nssv1781708,nssv1781748,nssv1781713,nssv1781735,nssv1781717,nssv1781712,nssv1781755,nssv1781699,nssv1781704,nssv1781694,nssv1781700,nssv1781729,nssv1781703,nssv1781691,nssv1781685,nssv1781750,nssv1781706 M 97 10 0 WDR47 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547426 1 109351035 109375337 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721167,nssv721168 M 17421 0 2 WDR47 nsv547427 1 109360246 109375907 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721169 M 17421 0 1 WDR47 nsv547428 1 109365179 109375337 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721170 M 17421 0 1 WDR47 nsv547433 1 109369286 109375907 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721195,nssv721194,nssv721188,nssv721187,nssv721192,nssv721191,nssv721190,nssv721193,nssv721189 M 17421 1 8 WDR47 dgv490n54 1 109369286 109376052 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547429,nsv547430,nsv547431,nsv547432,nsv547434,nsv547435 M 17421 0 20 WDR47 dgv491n54 1 109369286 109376208 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547437,nsv547436 M 17421 2 0 WDR47 esv32817 1 109370160 109380182 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv92654,essv98912,essv96618,essv101572,essv98648,essv96826,essv94341,essv101340,essv93353,essv93428,essv94761,essv99755,essv97854,essv96309,essv94136,essv92985,essv96225,essv97644,essv100203,essv94640,essv100900,essv101016 M 51 0 22 WDR47 21603,21606,21656,21659,21693,21791,21802,21805,21808,21837,21932,21939,22007,22011,22085,22086,22128,22170,22233,22278,22286,22371 nsv823954 1 109373301 109376884 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1426404 M 31 0 1 WDR47 AK6 nsv946128 1 109374144 109375378 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781784,nssv1781794,nssv1781781,nssv1781847,nssv1781771,nssv1781821,nssv1781840,nssv1781798,nssv1781835,nssv1781852,nssv1781842,nssv1781845,nssv1781775,nssv1781791,nssv1781765,nssv1781828,nssv1781836,nssv1781789,nssv1781758,nssv1781832,nssv1781759,nssv1781801,nssv1781776,nssv1781817,nssv1781772,nssv1781792,nssv1781777,nssv1781826,nssv1781833,nssv1781806,nssv1781785,nssv1781811,nssv1781763,nssv1781814,nssv1781766,nssv1781808,nssv1781780,nssv1781783,nssv1781760,nssv1781790,nssv1781841,nssv1781788,nssv1781761,nssv1781803,nssv1781767,nssv1781802,nssv1781764,nssv1781848,nssv1781770,nssv1781829,nssv1781768,nssv1781795,nssv1781787,nssv1781822,nssv1781838,nssv1781799,nssv1781839,nssv1781797,nssv1781837,nssv1781830,nssv1781757,nssv1781818,nssv1781769,nssv1781809,nssv1781834,nssv1781756,nssv1781773,nssv1781807,nssv1781774,nssv1781779,nssv1781762,nssv1781823,nssv1781778,nssv1781825,nssv1781793,nssv1781824,nssv1781786,nssv1781850,nssv1781819,nssv1781815,nssv1781846,nssv1781831,nssv1781800,nssv1781812,nssv1781805,nssv1781782,nssv1781796,nssv1781844,nssv1781849,nssv1781827,nssv1781851,nssv1781843,nssv1781816,nssv1781810,nssv1781813,nssv1781804,nssv1781820 M 97 10 0 WDR47 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv64n67 1 109374538 109376884 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv823965,nsv823976 M 31 0 10 WDR47 AK16,AK18,AK4,NA18564,NA18570,NA18942,NA18949,NA18951,NA18968,NA18997 nsv823987 1 109374538 109379575 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437752 M 31 0 1 WDR47 NA18547 esv2798 1 109374706 109376814 CNV loss Wang_et_al_2008 18987735 Sequencing essv25239 M 1 0 1 WDR47 YH esv27754 1 109374784 109377082 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17007,esv9821 M 40 0 12 WDR47 NA11995,NA12004,NA12006,NA12287,NA12414,NA12749,NA12828,NA12878,NA18517,NA18909,NA19099,NA19190 dgv492n54 1 109374806 109375721 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547449,nsv547453,nsv547439,nsv547438 M 17421 0 8 WDR47 nsv547440 1 109374806 109375721 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721213,nssv721209,nssv721212,nssv721208,nssv721210,nssv721211 M 17421 1 5 WDR47 dgv493n54 1 109374806 109376208 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547446,nsv547464,nsv547444,nsv547441 M 17421 8 164 WDR47 dgv494n54 1 109374806 109376262 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547461,nsv547452,nsv547447,nsv547463,nsv547462,nsv547465,nsv547445,nsv547451,nsv547450,nsv547458,nsv547455,nsv547443,nsv547454,nsv547456,nsv547457,nsv547442 M 17421 0 62 WDR47 dgv495n54 1 109374806 109379973 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547459,nsv547448 M 17421 0 2 WDR47 nsv547460 1 109374972 109375907 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721442,nssv721444,nssv721448,nssv721447,nssv721449,nssv721446,nssv721445,nssv721443 M 17421 0 8 WDR47 nsv547466 1 109375324 109376208 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721460 M 17421 1 0 WDR47 nsv547467 1 109375326 109376157 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721461 M 17421 0 1 WDR47 nsv946129 1 109391142 109394483 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781936,nssv1781899,nssv1781878,nssv1781944,nssv1781864,nssv1781943,nssv1781881,nssv1781879,nssv1781872,nssv1781885,nssv1781939,nssv1781901,nssv1781869,nssv1781910,nssv1781855,nssv1781895,nssv1781933,nssv1781914,nssv1781873,nssv1781919,nssv1781863,nssv1781909,nssv1781930,nssv1781898,nssv1781874,nssv1781916,nssv1781934,nssv1781853,nssv1781868,nssv1781904,nssv1781877,nssv1781945,nssv1781875,nssv1781947,nssv1781860,nssv1781905,nssv1781931,nssv1781888,nssv1781865,nssv1781925,nssv1781854,nssv1781886,nssv1781938,nssv1781921,nssv1781867,nssv1781946,nssv1781857,nssv1781917,nssv1781861,nssv1781940,nssv1781859,nssv1781942,nssv1781866,nssv1781891,nssv1781862,nssv1781948,nssv1781870,nssv1781894,nssv1781937,nssv1781906,nssv1781871,nssv1781907,nssv1781882,nssv1781889,nssv1781884,nssv1781880,nssv1781935,nssv1781912,nssv1781932,nssv1781892,nssv1781858,nssv1781927,nssv1781856,nssv1781893,nssv1781887,nssv1781876,nssv1781902,nssv1781900,nssv1781920,nssv1781922,nssv1781913,nssv1781911,nssv1781908,nssv1781941,nssv1781883,nssv1781915,nssv1781896,nssv1781897,nssv1781890,nssv1781923,nssv1781928,nssv1781918,nssv1781929,nssv1781903,nssv1781926,nssv1781949,nssv1781924 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3894001 1 109394249 109550463 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789557 M 3017 1 0 C1orf194,KIAA1324,SCARNA2,TAF13,TMEM167B esv6041 1 109399096 109399790 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28482 M 1 0 0 "" esv1198206 1 109399250 109399581 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3623261 M 2 0 1 "" HuRef nsv159041 1 109399251 109399581 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177619 M 24 "" nsv1008458 1 109441198 109575549 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496021 M 29084 1 0 C1orf194,KIAA1324,SARS,SCARNA2 nsv463128 1 109486796 109521908 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539158 M 1557 0 1 KIAA1324 HGDP00899 nsv547468 1 109486796 109521908 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173104 M 17421 0 1 KIAA1324 HGDP00899 nsv1009592 1 109490837 109556241 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487368 M 29084 0 1 KIAA1324 esv2750798 1 109490837 109556481 CNV loss Pinto_et_al_2007 17911159 SNP array essv6989844,essv6983716,essv6983714,essv6983715 M 771 0 4 KIAA1324 BEC_617 esv3411231 1 109500576 109500848 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670837,essv8670836 M 185 2 0 KIAA1324 NA19238,NA19240 esv3302633 1 109500671 109500802 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731667 M 185 1 0 KIAA1324 NA19240 nsv1012267 1 109512350 109624032 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492856 M 29084 1 0 CELSR2,KIAA1324,PSRC1,SARS nsv520456 1 109528945 109540594 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697432 M 2026 0 1 KIAA1324 nsv470732 1 109583560 109620053 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547762 M 443 0 1 CELSR2 HGDP00657 nsv517354 1 109583560 109627659 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700364,nssv704812,nssv682218,nssv704995,nssv674153,nssv692955,nssv688318,nssv680952,nssv651803 M 2026 0 9 CELSR2,PSRC1 esv3444646 1 109595352 109597450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691744 M 185 1 0 CELSR2 NA19239 esv993086 1 109598393 109607367 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565149 M 3 0 1 CELSR2 HuRef nsv547469 1 109606169 109618768 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721462 M 17421 0 1 CELSR2 nsv1003653 1 109669702 109739836 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486456 M 29084 1 0 SORT1 dgv252n100 1 109682326 109744497 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002485,nsv1010997,nsv1009201,nsv1004522 M 29084 5 0 PSMA5,SORT1 nsv506954 1 109862313 109868313 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623282 M 4 0 0 "" NA18994 nsv946131 1 109935423 109936259 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781194,nssv1781179,nssv1781198,nssv1781238,nssv1781242,nssv1781234,nssv1781246,nssv1781231,nssv1781212,nssv1781175,nssv1781187,nssv1781173,nssv1781209,nssv1781236,nssv1781189,nssv1781157,nssv1781220,nssv1781156,nssv1781186,nssv1781233,nssv1781196,nssv1781167,nssv1781190,nssv1781174,nssv1781243,nssv1781161,nssv1781214,nssv1781170,nssv1781188,nssv1781185,nssv1781204,nssv1781183,nssv1781154,nssv1781168,nssv1781207,nssv1781182,nssv1781223,nssv1781159,nssv1781211,nssv1781176,nssv1781208,nssv1781239,nssv1781226,nssv1781178,nssv1781203,nssv1781166,nssv1781222,nssv1781164,nssv1781216,nssv1781169,nssv1781249,nssv1781158,nssv1781225,nssv1781162,nssv1781217,nssv1781171,nssv1781201,nssv1781160,nssv1781227,nssv1781155,nssv1781205,nssv1781237,nssv1781244,nssv1781235,nssv1781202,nssv1781232,nssv1781197,nssv1781172,nssv1781191,nssv1781240,nssv1781248,nssv1781163,nssv1781241,nssv1781165,nssv1781200,nssv1781181,nssv1781218,nssv1781210,nssv1781195,nssv1781250,nssv1781228,nssv1781213,nssv1781199,nssv1781177,nssv1781245,nssv1781229,nssv1781224,nssv1781192,nssv1781221,nssv1781230,nssv1781206,nssv1781193,nssv1781219,nssv1781215,nssv1781180,nssv1781184,nssv1781247 M 97 10 0 GNAI3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv510951 1 109953419 110036983 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618666 M 4 0 0 AMPD2,GNAT2,GSTM1,GSTM2,GSTM4 CHM nsv2299 1 109954441 110006486 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4469,nssv5763,nssv2298,nssv10184,nssv7442 M 9 0 5 AMPD2,GNAT2,GSTM4 NA12156,NA12878,NA18555,NA18956,NA19129 dgv253n100 1 109957735 110044464 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001424,nsv1000516 M 29084 2 0 AMPD2,GSTM1,GSTM2,GSTM4 dgv254n100 1 109976059 110044464 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009093,nsv1011397,nsv1008513,nsv999032 M 29084 27 9 AMPD2,GSTM1,GSTM2,GSTM4 dgv255n100 1 109976059 110051747 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000503,nsv1009185,nsv998872,nsv1006548,nsv1001466,nsv998022,nsv1003083 M 29084 12 0 AMPD2,GSTM1,GSTM2,GSTM4 dgv256n100 1 109982828 110044464 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004021,nsv1000944,nsv1003678 M 29084 0 4 GSTM1,GSTM2,GSTM4 esv2612642 1 109987899 109993483 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5377552 M 1 0 1 "" NA18507 nsv547470 1 109988086 109990229 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv721463 M 17421 1 0 "" nsv436300 1 109988334 109993086 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466206 M 2 0 1 "" NA18505 nsv820656 1 109988369 109994137 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420525 M 1 0 1 "" NA10851 esv25172 1 109988369 110060631 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16117,esv15769,esv13941,esv10506,esv19304,esv14035 M 40 28 10 GSTM1,GSTM2,GSTM4,GSTM5 NA06985,NA07037,NA07045,NA11894,NA11931,NA11995,NA12004,NA12006,NA12044,NA12239,NA12287,NA12414,NA12749,NA12878,NA18502,NA18505,NA18508,NA18517,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 nsv820059 1 109988386 109989689 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419229 M 2 0 1 "" AK1 dgv65n67 1 109988565 109989745 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824020,nsv823998,nsv824009 M 31 0 4 "" AK10,AK14,AK20,AK4 esv989149 1 109988565 109990211 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587118 M 3 0 1 "" HuRef nsv824032 1 109988565 109990211 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1439476,nssv1424758,nssv1421466,nssv1437238,nssv1428837,nssv1432963,nssv1438598,nssv1440139 M 31 0 8 "" AK12,AK2,NA18537,NA18564,NA18592,NA18949,NA18973,NA18997 nsv824043 1 109988565 109994137 CNV gain+loss Park_et_al_2010 20364138 Oligo aCGH nssv1427275,nssv1435671 M 31 1 1 "" AK8,NA18566 nsv511709 1 109988614 109993092 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626350 M 1 0 1 "" 1 nsv498680 1 109988686 109992945 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585392 M 9 0 1 "" nsv160749 1 109988741 109992972 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179327 M 24 "" esv1011131 1 109988742 109992766 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565533 M 3 0 1 "" HuRef nsv514001 1 109988744 109990056 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2845981,nssv2845905,nssv2846059,nssv2846510,nssv2845898,nssv2845885,nssv2845956,nssv2843980,nssv2845990,nssv2845972,nssv2844004,nssv2845908,nssv2845906,nssv2843970,nssv2846481,nssv2846464,nssv2846021,nssv2845950,nssv2846053,nssv2846474,nssv2844022,nssv2845986,nssv2846487,nssv2845965,nssv2845951,nssv2846448,nssv2845980,nssv2845949,nssv2843990,nssv2844008,nssv2846473,nssv2844018,nssv2845995,nssv2843996,nssv2846026,nssv2846024,nssv2846074,nssv2846005,nssv2846014,nssv2846041,nssv2844005,nssv2846068,nssv2843998,nssv2844021,nssv2845878,nssv2845902,nssv2846066,nssv2845922,nssv2846046,nssv2845895,nssv2845998,nssv2846499,nssv2846460,nssv2845964,nssv2846016,nssv2846034,nssv2846020,nssv2846032,nssv2843966,nssv2843975,nssv2844013,nssv2845983,nssv2846498,nssv2845901,nssv2845876,nssv2845919,nssv2846043,nssv2845987,nssv2846451,nssv2845894,nssv2846455,nssv2843995,nssv2845921,nssv2846452,nssv2843962,nssv2843988,nssv2846008,nssv2845961,nssv2845985,nssv2845978,nssv2846485,nssv2845953,nssv2846461,nssv2846037,nssv2845897,nssv2845892,nssv2846062,nssv2846470,nssv2845937,nssv2845945,nssv2846502,nssv2843971,nssv2845968,nssv2844012,nssv2845881,nssv2843972,nssv2845989,nssv2845882,nssv2846478,nssv2845952,nssv2845996,nssv2845944,nssv2845931,nssv2846042,nssv2844000,nssv2845914,nssv2846025,nssv2846084,nssv2845967,nssv2845896,nssv2846031,nssv2846459,nssv2844023,nssv2846506,nssv2846083,nssv2846491,nssv2845976,nssv2843979,nssv2846064,nssv2846079,nssv2845999,nssv2846061,nssv2846490,nssv2846082,nssv2846075,nssv2846492,nssv2843986,nssv2845930,nssv2845971,nssv2845973,nssv2844010,nssv2846497,nssv2845993,nssv2845890,nssv2844017,nssv2846482,nssv2845904,nssv2844001,nssv2846054,nssv2845891,nssv2845958,nssv2846076,nssv2845997,nssv2845963,nssv2846048,nssv2846466,nssv2846483,nssv2843982,nssv2845912,nssv2845923,nssv2846500,nssv2846035,nssv2846077,nssv2846051,nssv2846060,nssv2845910,nssv2846019,nssv2843978,nssv2845911,nssv2845900,nssv2846022,nssv2846011,nssv2846015,nssv2846050,nssv2845915,nssv2846081,nssv2846067,nssv2845920,nssv2846493,nssv2846063,nssv2846071,nssv2845879,nssv2844020,nssv2845928,nssv2845988,nssv2846456,nssv2845929,nssv2846488,nssv2845960,nssv2845966,nssv2843993,nssv2843999,nssv2845883,nssv2843963,nssv2846467,nssv2845943,nssv2846000,nssv2846450,nssv2844024,nssv2846501,nssv2846002,nssv2846052,nssv2843987,nssv2845907,nssv2843976,nssv2843969,nssv2845884,nssv2844019,nssv2845875,nssv2846453,nssv2845948,nssv2845940,nssv2846463,nssv2845934,nssv2845913,nssv2846480,nssv2845947,nssv2846472,nssv2845942,nssv2845959,nssv2846468,nssv2846010,nssv2845888,nssv2845917,nssv2846007,nssv2843968,nssv2845924,nssv2846454,nssv2846040,nssv2846072,nssv2845886,nssv2846504,nssv2846018,nssv2845918,nssv2846023,nssv2845979,nssv2845982,nssv2843994,nssv2843964,nssv2846058,nssv2843992,nssv2845893,nssv2846055,nssv2846507,nssv2843989,nssv2846484,nssv2846080,nssv2845955,nssv2845877,nssv2846039,nssv2844026,nssv2846049,nssv2846465,nssv2844025,nssv2845939,nssv2846044,nssv2846009,nssv2845954,nssv2846477,nssv2844015,nssv2845957,nssv2846056,nssv2844027,nssv2844007,nssv2846033,nssv2846045,nssv2845974,nssv2844014,nssv2846001,nssv2844011,nssv2845977,nssv2845932,nssv2846004,nssv2844009,nssv2844003,nssv2846508,nssv2845935,nssv2846038,nssv2844016,nssv2843965,nssv2844006,nssv2846509,nssv2846475,nssv2845969,nssv2846017,nssv2845916,nssv2846457,nssv2846073,nssv2845994,nssv2846449,nssv2846479,nssv2845880,nssv2846070,nssv2846471,nssv2843974,nssv2846013,nssv2843967,nssv2844028,nssv2845992,nssv2846503,nssv2846495,nssv2845970,nssv2845936,nssv2843991,nssv2846458,nssv2846065,nssv2845927,nssv2846057,nssv2846027,nssv2843981,nssv2846029,nssv2846069,nssv2846036,nssv2846012,nssv2846496,nssv2846003,nssv2846469,nssv2846030,nssv2845991,nssv2845889,nssv2843983,nssv2845925,nssv2846494,nssv2846006,nssv2843973,nssv2843977,nssv2844029,nssv2845933,nssv2846505,nssv2844002,nssv2846078,nssv2843984,nssv2843985,nssv2845975,nssv2845984,nssv2846489,nssv2846028,nssv2845899,nssv2846462,nssv2846486,nssv2846047,nssv2845926,nssv2845962,nssv2845887,nssv2845903,nssv2845946,nssv2845938,nssv2843997,nssv2846476,nssv2845909,nssv2845941 M 2366 340 1 "" NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07034,NA07037,NA07048,NA07051,NA07056,NA07346,NA07348,NA07349,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10840,NA10845,NA10851,NA10852,NA10855,NA10857,NA10859,NA10860,NA10864,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11894,NA11917,NA11930,NA11992,NA11993,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12146,NA12155,NA12156,NA12236,NA12248,NA12249,NA12264,NA12272,NA12274,NA12275,NA12282,NA12283,NA12286,NA12329,NA12335,NA12341,NA12344,NA12347,NA12376,NA12386,NA12399,NA12400,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12753,NA12761,NA12763,NA12767,NA12775,NA12776,NA12777,NA12801,NA12802,NA12813,NA12814,NA12815,NA12818,NA12827,NA12828,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12878,NA12889,NA12892,NA18485,NA18486,NA18488,NA18489,NA18497,NA18499,NA18503,NA18504,NA18506,NA18507,NA18508,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18542,NA18545,NA18547,NA18550,NA18552,NA18562,NA18563,NA18566,NA18570,NA18571,NA18572,NA18576,NA18577,NA18579,NA18582,NA18605,NA18612,NA18621,NA18624,NA18635,NA18637,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18923,NA18924,NA18925,NA18933,NA18934,NA18940,NA18942,NA18947,NA18948,NA18959,NA18968,NA18969,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18987,NA18990,NA18992,NA18994,NA18999,NA19003,NA19005,NA19007,NA19012,NA19092,NA19094,NA19095,NA19096,NA19097,NA19099,NA19100,NA19101,NA19102,NA19103,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19121,NA19122,NA19127,NA19128,NA19129,NA19131,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19174,NA19175,NA19178,NA19179,NA19180,NA19182,NA19183,NA19184,NA19186,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19206,NA19207,NA19208,NA19214,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21302,NA21303,NA21307,NA21309,NA21310,NA21313,NA21359,NA21360,NA21362,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21423,NA21425,NA21438,NA21439,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21513,NA21514,NA21523,NA21524,NA21525,NA21526,NA21581,NA21599,NA21601,NA21608,NA21614,NA21615,NA21648,NA21686,NA21716 esv1001412 1 109988760 109992645 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586568 M 3 0 1 "" HuRef esv33954 1 109988772 109990027 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94515,essv94116,essv101137,essv97092,essv93672,essv101387,essv97659,essv99276,essv99037,essv101593,essv98000,essv96112,essv101696,essv100193,essv95979,essv95380,essv94891,essv92650,essv99641 M 51 8 11 "" 21603,21618,21802,21805,21872,21909,21932,21938,21972,22007,22075,22127,22217,22231,22233,22259,22275,22278,22286 dgv496n54 1 109988805 109989781 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547472,nsv547471,nsv547476 M 17421 0 3 "" dgv497n54 1 109988805 109989987 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547474,nsv547473,nsv547478,nsv547477,nsv547482 M 17421 53 669 "" nsv547475 1 109988805 109990229 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722183,nssv722203,nssv722185,nssv722202,nssv722181,nssv722199,nssv722207,nssv722191,nssv722204,nssv722180,nssv722195,nssv722177,nssv722184,nssv722189,nssv722173,nssv722171,nssv722194,nssv722176,nssv722201,nssv722198,nssv722188,nssv722206,nssv722193,nssv722187,nssv722174,nssv722186,nssv722182,nssv722197,nssv722175,nssv722179,nssv722196,nssv722172,nssv722190,nssv722205,nssv722200,nssv722178,nssv722192 M 17421 6 31 "" dgv498n54 1 109988913 109990229 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547479,nsv547480,nsv547481 M 17421 9 0 "" dgv499n54 1 109989100 109989987 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547485,nsv547484,nsv547483 M 17421 0 3 "" nsv824054 1 109989509 109990211 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428043 M 31 0 1 "" AK10 nsv824065 1 109989666 109994137 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1429576 M 31 0 1 "" AK14 nsv946132 1 109994233 109997687 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781276,nssv1781300,nssv1781262,nssv1781291,nssv1781279,nssv1781292,nssv1781270,nssv1782264,nssv1781272,nssv1782270,nssv1781333,nssv1781309,nssv1781329,nssv1781295,nssv1781271,nssv1781313,nssv1781267,nssv1781251,nssv1781258,nssv1781289,nssv1781256,nssv1781314,nssv1781335,nssv1782263,nssv1781331,nssv1782271,nssv1781265,nssv1782265,nssv1781273,nssv1782262,nssv1781328,nssv1781281,nssv1781263,nssv1781308,nssv1781275,nssv1781327,nssv1781259,nssv1781301,nssv1781255,nssv1781294,nssv1781266,nssv1781305,nssv1781330,nssv1781286,nssv1781261,nssv1781287,nssv1781253,nssv1781284,nssv1781334,nssv1781311,nssv1781257,nssv1781315,nssv1781252,nssv1781324,nssv1781254,nssv1781304,nssv1781332,nssv1781319,nssv1781282,nssv1782268,nssv1781268,nssv1781325,nssv1782261,nssv1781274,nssv1781269,nssv1781298,nssv1781264,nssv1781306,nssv1782260,nssv1781296,nssv1781280,nssv1781290,nssv1781260,nssv1781318,nssv1781293,nssv1781321,nssv1781283,nssv1781302,nssv1782267,nssv1781288,nssv1781320,nssv1782269,nssv1781310,nssv1782266,nssv1781285,nssv1781299,nssv1781326,nssv1781323,nssv1781297,nssv1781322,nssv1781278,nssv1781317,nssv1781277,nssv1781303,nssv1781316,nssv1781312,nssv1781307 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv257n100 1 109994289 110051747 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007165,nsv1003861,nsv1014168,nsv1008757 M 29084 4 0 GSTM1,GSTM2,GSTM4 nsv1001758 1 109994289 110066123 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501105 M 29084 1 0 GSTM1,GSTM2,GSTM4,GSTM5 nsv547486 1 110001883 110034604 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722238 M 17421 0 1 GSTM1,GSTM2,GSTM4 dgv258n100 1 110003103 110044464 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999798,nsv1014966,nsv999622 M 29084 4 0 GSTM1,GSTM2,GSTM4 nsv946133 1 110004817 110005744 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782294,nssv1782325,nssv1782297,nssv1782309,nssv1782291,nssv1782361,nssv1782284,nssv1782326,nssv1782352,nssv1782344,nssv1782281,nssv1782347,nssv1782354,nssv1782368,nssv1782301,nssv1782330,nssv1782275,nssv1782364,nssv1782303,nssv1782338,nssv1782356,nssv1782315,nssv1782358,nssv1782299,nssv1782300,nssv1782320,nssv1782285,nssv1782333,nssv1782349,nssv1782311,nssv1782292,nssv1782314,nssv1782288,nssv1782348,nssv1782351,nssv1782343,nssv1782277,nssv1782308,nssv1782296,nssv1782359,nssv1782293,nssv1782302,nssv1782280,nssv1782328,nssv1782276,nssv1782295,nssv1782350,nssv1782306,nssv1782279,nssv1782272,nssv1782282,nssv1782362,nssv1782355,nssv1782305,nssv1782357,nssv1782367,nssv1782283,nssv1782341,nssv1782289,nssv1782316,nssv1782286,nssv1782334,nssv1782278,nssv1782317,nssv1782353,nssv1782329,nssv1782273,nssv1782321,nssv1782290,nssv1782342,nssv1782274,nssv1782312,nssv1782287,nssv1782363,nssv1782331,nssv1782360,nssv1782319,nssv1782365,nssv1782346,nssv1782310,nssv1782318,nssv1782304,nssv1782323,nssv1782336,nssv1782324,nssv1782337,nssv1782313,nssv1782322,nssv1782307,nssv1782327,nssv1782345,nssv1782332,nssv1782339,nssv1782335,nssv1782366,nssv1782340,nssv1782298 M 97 10 0 GSTM4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv259n100 1 110007486 110044464 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011258,nsv1013441 M 29084 2 2 GSTM1,GSTM2,GSTM4 nsv482081 1 110012167 110028141 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558442 M 1 1 0 GSTM2 KB1 nsv946134 1 110012658 110060844 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782394,nssv1782411,nssv1782391,nssv1782458,nssv1782455,nssv1782440,nssv1782449,nssv1782465,nssv1782382,nssv1782395,nssv1782453,nssv1782429,nssv1782384,nssv1782428,nssv1782452,nssv1782462,nssv1782381,nssv1782423,nssv1782397,nssv1782413,nssv1782447,nssv1782418,nssv1782388,nssv1782439,nssv1782380,nssv1782401,nssv1782389,nssv1782463,nssv1782446,nssv1782396,nssv1782385,nssv1782409,nssv1782379,nssv1782459,nssv1782383,nssv1782402,nssv1782377,nssv1782461,nssv1782371,nssv1782442,nssv1782400,nssv1782464,nssv1782374,nssv1782432,nssv1782454,nssv1782408,nssv1782393,nssv1782404,nssv1782390,nssv1782415,nssv1782451,nssv1782433,nssv1782373,nssv1782392,nssv1782378,nssv1782431,nssv1782376,nssv1782443,nssv1782448,nssv1782456,nssv1782386,nssv1782420,nssv1782375,nssv1782405,nssv1782387,nssv1782399,nssv1782372,nssv1782438,nssv1782398,nssv1782444,nssv1782370,nssv1782445,nssv1782450,nssv1782424,nssv1782421,nssv1782427,nssv1782416,nssv1782369,nssv1782436,nssv1782417,nssv1782457,nssv1782441,nssv1782426,nssv1782425,nssv1782422,nssv1782406,nssv1782437,nssv1782414,nssv1782419,nssv1782403,nssv1782434,nssv1782412,nssv1782410,nssv1782430,nssv1782407,nssv1782460,nssv1782435 M 97 10 0 GSTM1,GSTM2,GSTM5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv820548 1 110015455 110047109 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420536 M 1 0 1 GSTM1,GSTM2 NA10851 nsv824076 1 110015455 110047109 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423139,nssv1440826,nssv1423629,nssv1426405,nssv1427276,nssv1435672 M 31 0 6 GSTM1,GSTM2 AK6,AK8,NA18566,NA18968,NA18969,NA18999 esv1003982 1 110016676 110061673 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564905 M 3 0 1 GSTM1,GSTM2,GSTM5 HuRef esv998761 1 110018063 110046129 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586513 M 3 1 0 GSTM1,GSTM2 HuRef nsv2310 1 110018442 110062181 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4479,nssv10189,nssv10968,nssv9560,nssv2307,nssv5773,nssv6805 M 9 0 7 GSTM1,GSTM2,GSTM5 NA12156,NA12878,NA15510,NA18507,NA18555,NA18956,NA19129 nsv547487 1 110018495 110057743 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722239 M 17421 1 0 GSTM1,GSTM2,GSTM5 nsv508471 1 110018524 110036983 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618981,nssv620139 M 4 0 2 GSTM1,GSTM2 NA10860,NA15510 nsv10617 1 110018803 110059234 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv15095,nssv16429,nssv17402,nssv17094,nssv15753,nssv14755,nssv16432,nssv18432,nssv16438,nssv16102,nssv23079,nssv18771,nssv23389,nssv16426,nssv23699,nssv20744,nssv15777,nssv17410,nssv19769,nssv17745,nssv17080,nssv17090,nssv20099,nssv17740,nssv16742,nssv17747,nssv16083,nssv17072,nssv17101,nssv17415,nssv20100,nssv21074 M 31 21 0 GSTM1,GSTM2,GSTM5 NA07029,NA07048,NA10847,NA12802,NA18502,NA18517,NA18537,NA18552,NA18563,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19132,NA19144,NA19173,NA19221,NA19240 esv3450949 1 110018852 110019650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691746 M 185 1 0 GSTM2 NA19240 dgv260n100 1 110020519 110038458 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012822,nsv1006541,nsv1009780 M 29084 0 3 GSTM1,GSTM2 dgv261n100 1 110020519 110041689 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006728,nsv1014897 M 29084 5 0 GSTM1,GSTM2 dgv262n100 1 110020519 110044464 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005063,nsv1002052,nsv1000327,nsv1013959,nsv1005106,nsv1001067,nsv1002675 M 29084 91 87 GSTM1,GSTM2 dgv263n100 1 110020519 110054653 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007874,nsv1003229 M 29084 6 4 GSTM1,GSTM2 nsv1003510 1 110020519 110058147 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486290 M 29084 0 1 GSTM1,GSTM2,GSTM5 dgv3e203 1 110020531 110054653 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array esv2763824,esv2764242 M 1109 3 154 GSTM1,GSTM2 RW_0010,RW_0014,RW_0017,RW_0029,RW_0030,RW_0039,RW_0041,RW_0047,RW_0057,RW_0072,RW_0079,RW_0080,RW_0084,RW_0088,RW_0091,RW_0094,RW_0098,RW_0105,RW_0107,RW_0108,RW_0111,RW_0113,RW_0115,RW_0118,RW_0120,RW_0122,RW_0123,RW_0126,RW_0129,RW_0137,RW_0138,RW_0139,RW_0145,RW_0168,RW_0170,RW_0180,RW_0187,RW_0190,RW_0192,RW_0201,RW_0210,RW_0211,RW_0220,RW_0226,RW_0235,RW_0239,RW_0241,RW_0250,RW_0253,RW_0262,RW_0273,RW_0324,RW_0331,RW_0348,RW_0503,RW_0505,RW_0519,RW_0528,RW_0532,RW_0549,RW_0551,RW_0559,RW_0595,RW_0600,RW_0601,RW_0606,RW_0610,RW_0624,RW_0626,RW_0629,RW_0633,RW_0637,RW_0658,RW_0660,RW_0663,RW_0665,RW_0666,RW_0667,SW_0001,SW_0003,SW_0004,SW_0021,SW_0044,SW_0047,SW_0076,SW_0086,SW_0091,SW_0099,SW_0100,SW_0116,SW_0119,SW_0581,SW_0589,SW_0590,SW_0604,SW_0607,SW_0620,SW_0625,SW_0626,SW_0631,SW_0632,SW_0646,SW_0648,SW_0663,SW_0665,SW_0673,SW_0674,SW_0677,SW_0691,SW_0703,SW_0761,SW_0771,SW_0775,SW_0789,SW_0791,SW_0800,SW_0802,SW_0804,SW_0814,SW_0815,SW_0816,SW_0817,SW_0828,SW_1081,SW_1084,SW_1087,SW_1089,SW_1093,SW_1095,SW_1105,SW_1109,SW_1112,SW_1113,SW_1116,SW_1125,SW_1126,SW_1140,SW_1147,SW_1148,SW_1170,SW_1174,SW_1175,SW_1176,SW_1194,SW_1220,SW_1221,SW_1227,SW_1249,SW_1258,SW_1263,SW_1266,SW_1273,SW_1279,SW_1285,SW_1286,SW_1290,SW_1308 dgv264n100 1 110021609 110047641 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008918,nsv1000913,nsv1001689,nsv1004869 M 29084 10 0 GSTM1,GSTM2 dgv265n100 1 110021609 110058147 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000643,nsv1003676,nsv1010244,nsv1006594,nsv1005194,nsv998938,nsv1006811,nsv1013708,nsv1014454,nsv1000819,nsv1007916,nsv997290,nsv1001347,nsv1001491,nsv1012898 M 29084 30 0 GSTM1,GSTM2,GSTM5 nsv1009967 1 110022101 110047641 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701182 M 29084 0 1 GSTM1,GSTM2 nsv824087 1 110023068 110041912 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430362 M 31 0 1 GSTM1,GSTM2 AK16 dgv6e180 1 110023068 110044476 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1003434,esv1004094 M 3 1 0 GSTM1,GSTM2 HuRef nsv2321 1 110023298 110030979 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1309 M 9 1 0 GSTM2 NA19240 nsv514002 1 110023824 110044456 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2847116,nssv2846239,nssv2846242,nssv2847129,nssv2847059,nssv2846238,nssv2847143,nssv2846136,nssv2847104,nssv2847101,nssv2846187,nssv2846220,nssv2846208,nssv2846117,nssv2846234,nssv2847078,nssv2847089,nssv2847105,nssv2847070,nssv2846167,nssv2846200,nssv2846233,nssv2846223,nssv2847099,nssv2846192,nssv2846186,nssv2847046,nssv2846128,nssv2847124,nssv2846103,nssv2847144,nssv2846093,nssv2847061,nssv2846143,nssv2847117,nssv2846100,nssv2846218,nssv2847122,nssv2846153,nssv2846174,nssv2846154,nssv2847075,nssv2847044,nssv2847065,nssv2846213,nssv2846104,nssv2847096,nssv2847030,nssv2846178,nssv2847125,nssv2846170,nssv2846107,nssv2847149,nssv2846202,nssv2847029,nssv2847057,nssv2846172,nssv2847045,nssv2847161,nssv2847146,nssv2846137,nssv2847087,nssv2846127,nssv2846097,nssv2847138,nssv2847140,nssv2846133,nssv2846216,nssv2846230,nssv2846157,nssv2847150,nssv2847114,nssv2846203,nssv2847108,nssv2847067,nssv2846206,nssv2846165,nssv2846126,nssv2847053,nssv2847052,nssv2846105,nssv2846146,nssv2846144,nssv2846114,nssv2847084,nssv2847115,nssv2846140,nssv2846193,nssv2846183,nssv2846094,nssv2846196,nssv2846209,nssv2847079,nssv2847123,nssv2847112,nssv2847121,nssv2846240,nssv2847093,nssv2847072,nssv2847091,nssv2846159,nssv2846085,nssv2847132,nssv2846102,nssv2846177,nssv2846180,nssv2846119,nssv2846113,nssv2846090,nssv2846222,nssv2847054,nssv2847156,nssv2847094,nssv2846210,nssv2847111,nssv2847127,nssv2846112,nssv2846132,nssv2847042,nssv2846148,nssv2847073,nssv2846147,nssv2846141,nssv2847026,nssv2847154,nssv2847028,nssv2846181,nssv2847040,nssv2847136,nssv2846227,nssv2846169,nssv2846125,nssv2847041,nssv2847024,nssv2846211,nssv2846162,nssv2847157,nssv2846190,nssv2847071,nssv2847027,nssv2846121,nssv2847039,nssv2847056,nssv2847025,nssv2846235,nssv2846224,nssv2847130,nssv2847076,nssv2847118,nssv2846116,nssv2846205,nssv2846108,nssv2846160,nssv2847036,nssv2846086,nssv2846150,nssv2847033,nssv2847159,nssv2846166,nssv2846156,nssv2847031,nssv2846198,nssv2846122,nssv2847162,nssv2846134,nssv2847037,nssv2846115,nssv2846164,nssv2847048,nssv2847135,nssv2846212,nssv2847141,nssv2847066,nssv2846138,nssv2846201,nssv2846229,nssv2846225,nssv2847147,nssv2846217,nssv2846243,nssv2847107,nssv2846155,nssv2847055,nssv2847081,nssv2846145,nssv2846099,nssv2846221,nssv2847119,nssv2846111,nssv2846091,nssv2846241,nssv2847083,nssv2846207,nssv2847131,nssv2846142,nssv2847158,nssv2846120,nssv2847085,nssv2847088,nssv2846135,nssv2847077,nssv2847095,nssv2846124,nssv2847137,nssv2846101,nssv2847034,nssv2847090,nssv2847082,nssv2846106,nssv2847128,nssv2847110,nssv2847050,nssv2847148,nssv2847060,nssv2847068,nssv2847098,nssv2846184,nssv2847134,nssv2847063,nssv2846129,nssv2847064,nssv2847145,nssv2846151,nssv2847155,nssv2846130,nssv2847051,nssv2847086,nssv2847092,nssv2847152,nssv2847102,nssv2846168,nssv2846118,nssv2846195,nssv2846152,nssv2846123,nssv2847032,nssv2847035,nssv2847047,nssv2847080,nssv2847043,nssv2846163,nssv2846179,nssv2846139,nssv2846173,nssv2846204,nssv2846188,nssv2846087,nssv2846096,nssv2847038,nssv2846215,nssv2846237,nssv2846161,nssv2847113,nssv2846199,nssv2847062,nssv2846095,nssv2846088,nssv2847049,nssv2846219,nssv2847133,nssv2846232,nssv2846089,nssv2846236,nssv2846185,nssv2847153,nssv2846176,nssv2846228,nssv2847139,nssv2847103,nssv2846191,nssv2846158,nssv2846231,nssv2846214,nssv2846098,nssv2847097,nssv2847100,nssv2846182,nssv2847160,nssv2847151,nssv2847106,nssv2846171,nssv2847142,nssv2847074,nssv2846175,nssv2846194,nssv2846092,nssv2846226,nssv2846149,nssv2846110,nssv2846109,nssv2846189,nssv2847069,nssv2846131,nssv2847058,nssv2846197,nssv2847120,nssv2847109,nssv2847126 M 2366 298 0 GSTM1,GSTM2 NA06984,NA06985,NA06991,NA06993,NA06994,NA07000,NA07014,NA07034,NA07037,NA07048,NA07051,NA07055,NA07347,NA07348,NA07349,NA10837,NA10850,NA10852,NA10856,NA10864,NA11829,NA11840,NA11892,NA11894,NA11917,NA11919,NA11920,NA11930,NA11995,NA12004,NA12005,NA12044,NA12146,NA12154,NA12239,NA12248,NA12273,NA12283,NA12329,NA12335,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12399,NA12400,NA12546,NA12717,NA12749,NA12750,NA12751,NA12760,NA12767,NA12775,NA12778,NA12802,NA12815,NA12830,NA12875,NA12878,NA12890,NA12892,NA18484,NA18486,NA18487,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18516,NA18517,NA18518,NA18519,NA18522,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18563,NA18566,NA18570,NA18572,NA18576,NA18577,NA18579,NA18582,NA18594,NA18605,NA18608,NA18611,NA18612,NA18621,NA18624,NA18632,NA18635,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18934,NA18935,NA18940,NA18942,NA18948,NA18959,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18987,NA18990,NA18991,NA18992,NA18994,NA19005,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19117,NA19118,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19159,NA19160,NA19172,NA19173,NA19175,NA19178,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19205,NA19206,NA19208,NA19209,NA19210,NA19214,NA19222,NA19223,NA19224,NA19235,NA19236,NA19237,NA19239,NA19240,NA19248,NA19252,NA19256,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21312,NA21316,NA21344,NA21359,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21400,NA21401,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21455,NA21478,NA21479,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21524,NA21526,NA21580,NA21581,NA21583,NA21600,NA21601,NA21608,NA21614,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717 nsv276 1 110025520 110054404 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv276 M 1 0 1 GSTM1,GSTM2 NA15510 nsv1009692 1 110025895 110036555 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487494 M 29084 1 0 GSTM1,GSTM2 dgv266n100 1 110025895 110038458 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999677,nsv999988,nsv1003834,nsv1010142 M 29084 5 9 GSTM1,GSTM2 dgv267n100 1 110025895 110041689 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004988,nsv1014059,nsv1006502,nsv1008891,nsv1012344,nsv1006939,nsv1010592,nsv999907,nsv1013492,nsv1013811 M 29084 255 356 GSTM1,GSTM2 dgv268n100 1 110025895 110044464 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012161,nsv1007317,nsv1010298,nsv1004059,nsv998013,nsv999820,nsv1013410 M 29084 0 22 GSTM1,GSTM2 dgv269n100 1 110025895 110047641 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012200,nsv1012726,nsv999979,nsv997465,nsv1008835,nsv1004510,nsv1008955,nsv1007192,nsv1005701,nsv1004328,nsv1002298,nsv1001074,nsv1015095,nsv998935,nsv1013120,nsv997730,nsv1010250,nsv1004507,nsv1005126,nsv1006797,nsv997747 M 29084 1112 563 GSTM1,GSTM2 dgv270n100 1 110025895 110071365 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001089,nsv1012256 M 29084 2 0 GSTM1,GSTM2,GSTM5 dgv1e213 1 110025907 110044476 CNV gain Mokhtar_et_al_2014 24956385 SNP array esv3584939,esv3584917,esv3584950 M 34 13 0 GSTM1,GSTM2 KSF005,KSM006,KSM008,OA001,OA0039,OA007,OA013,OA016,OA017,OA018b,OA053,OA059,OA062 esv2421364 1 110025907 110044476 OTHER complex Altshuler_et_al_2010 20811451 SNP array essv5095433,essv5019217,essv5053906,essv5085204,essv5134754,essv5105510,essv5057872,essv5062297,essv5135550,essv5129203,essv5079813,essv5080479,essv5083808,essv5132066,essv5092761,essv5154963,essv5107140,essv5063702,essv5009350,essv5086869,essv5052065,essv5032703,essv5072489,essv5067502,essv5034285,essv5006367,essv5135608,essv5066953,essv5044759,essv5068502,essv5060215,essv5005763,essv5096048,essv5086687,essv5127072,essv5007058,essv5020548,essv5038128,essv5142040,essv5158818,essv5129499,essv5078248,essv5133555,essv5136280,essv5135078,essv5116695,essv5055951,essv5091801,essv5003352,essv5030964,essv5126399,essv5016665,essv5025831,essv5025391,essv5121530,essv5050204,essv5146717,essv5004104,essv5113936,essv5120082,essv5129821,essv5038785,essv5134786,essv5144388,essv5107700,essv5053181,essv5076232,essv5143008,essv5104515,essv5037546,essv5122363,essv5058010,essv5103699,essv5096706,essv5026331,essv5089906,essv5135834,essv5031948,essv5078112,essv5049426,essv5154722,essv5035126,essv5158806,essv5038844,essv5122071,essv5103440,essv5037092,essv5129409,essv5080347,essv5076706,essv5134921,essv5068092,essv5065416,essv5121449,essv5152722,essv5047881,essv5127130,essv5081579,essv5025586,essv5067200,essv5099255,essv5027597,essv5128164,essv5150638,essv5141884,essv5036937,essv5038787,essv5103951,essv5057699,essv5128874,essv5010970,essv5136991,essv5085856,essv5096720,essv5134437,essv5010486,essv5145383,essv5029014,essv5068648,essv5036071,essv5159274,essv5054749,essv5040972,essv5015051,essv5022473,essv5070464,essv5139473,essv5069616,essv5033567,essv5140613,essv5012425,essv5073758,essv5101816,essv5011715,essv5160483,essv5159054,essv5142900,essv5068985,essv5078877,essv5027132,essv5039216,essv5086128,essv5152205,essv5083954,essv5081587,essv5008835,essv5135826,essv5042114,essv5030985,essv5017846,essv5120543,essv5006939,essv5070757,essv5016947,essv5053893,essv5017937,essv5090036,essv5095168,essv5026520,essv5037430,essv5028014,essv5153838,essv5123449,essv5124953,essv5054026,essv5146707,essv5118928,essv5007545,essv5057875,essv5020434,essv5129243,essv5094182,essv5048432,essv5120508,essv5073651,essv5016442,essv5032364,essv5147026,essv5054200,essv5102985,essv5141153,essv5068524,essv5151129,essv5116828,essv5154525,essv5015251,essv5156133,essv5065568,essv5026448,essv5160603,essv5134016,essv5066775,essv5098094,essv5124205,essv5128418,essv5001906,essv5040451,essv5147902,essv5157928,essv5007452,essv5122523,essv5033671,essv5114701,essv5061141,essv5029418,essv5077213,essv5048385,essv5156964,essv5063928,essv5065200,essv5098905,essv5014782,essv5012146,essv5119016,essv5096858,essv5031897,essv5027005,essv5113054,essv5147994,essv5050430,essv5004897,essv5156912,essv5137803,essv5158515,essv5059054,essv5079321,essv5057396,essv5075534,essv5019958,essv5039022,essv5105406,essv5039371,essv5053773,essv5019110,essv5092424,essv5066387,essv5073377,essv5145397,essv5040901,essv5160832,essv5021071,essv5121164,essv5146419,essv5094069,essv5094020,essv5094893,essv5152285,essv5062917,essv5043475,essv5050842,essv5094418,essv5087791,essv5136957,essv5036122,essv5110282,essv5072792,essv5157658,essv5044417,essv5062976,essv5073970,essv5129872,essv5144685,essv5131706,essv5160844,essv5012172,essv5068547,essv5116089,essv5141154,essv5096328,essv5021157,essv5038499,essv5121091,essv5096914,essv5076343,essv5050061,essv5113029,essv5149448,essv5027497,essv5043551,essv5115431,essv5067745,essv5123856,essv5015363,essv5104545,essv5097284,essv5102281,essv5040803,essv5054091,essv5079969,essv5036539,essv5147737,essv5069186,essv5106129,essv5024159,essv5039697,essv5136323,essv5108073,essv5082329,essv5132884,essv5099772,essv5075921,essv5115137,essv5057296,essv5014600,essv5049745,essv5156397,essv5030769,essv5007847,essv5130454,essv5159787,essv5120922,essv5028838,essv5081357,essv5147007,essv5042585,essv5049118,essv5046583,essv5014443,essv5021659,essv5094422,essv5102848,essv5022238,essv5079038,essv5133046,essv5031888,essv5067132,essv5082795,essv5008738,essv5120819,essv5041531,essv5116941,essv5100566,essv5121124,essv5107175,essv5081529,essv5083300,essv5021679,essv5050177,essv5156095,essv5117381,essv5031961,essv5105261,essv5041213,essv5050066,essv5073057,essv5098124,essv5014837,essv5128456,essv5094340,essv5081863,essv5089994,essv5119027,essv5088809,essv5107410,essv5148484,essv5103834,essv5027495,essv5094149,essv5160421,essv5093368,essv5049498,essv5085749,essv5070504,essv5033542,essv5044933,essv5157312,essv5111770,essv5160724,essv5015629,essv5126887,essv5054335,essv5065640,essv5099838,essv5113620,essv5063077,essv5057868,essv5014816,essv5065225,essv5106869,essv5130873,essv5146557,essv5043833,essv5101216,essv5103262,essv5131439,essv5042155,essv5117708,essv5069194,essv5012177,essv5109945,essv5069419,essv5121747,essv5132843,essv5008921,essv5042982,essv5115143,essv5143155,essv5064513,essv5150632,essv5156370,essv5017481,essv5031909,essv5042769,essv5041383,essv5029317,essv5036402,essv5042885,essv5134665,essv5027377,essv5031404,essv5002759,essv5086478,essv5038909,essv5105958,essv5145809,essv5102335,essv5150935,essv5129901,essv5149213,essv5047821,essv5062977,essv5147854,essv5063764,essv5157060,essv5032630,essv5021977,essv5026862,essv5024564,essv5008713,essv5082372,essv5138989,essv5117301,essv5069031,essv5002751,essv5100945,essv5069739,essv5074275,essv5100668,essv5157306,essv5148221,essv5150502,essv5012612,essv5122087,essv5042218,essv5052555,essv5077314,essv5115186,essv5007844,essv5114282,essv5018352,essv5060548,essv5139544,essv5090331,essv5023394,essv5015184,essv5075730,essv5150587,essv5034040,essv5077521,essv5037871,essv5062101,essv5109658,essv5057499,essv5149116,essv5109920,essv5138976,essv5032632,essv5006457,essv5057473,essv5003720,essv5064327,essv5019892,essv5094224,essv5110192,essv5117898,essv5059071,essv5105756,essv5114628,essv5121844,essv5137488,essv5052447,essv5064537,essv5104540,essv5029830,essv5058724,essv5039107,essv5097821,essv5035909,essv5095548,essv5002457,essv5077566,essv5086110,essv5076811,essv5024914,essv5094725,essv5075649,essv5043269,essv5125664,essv5045238,essv5143469,essv5029461,essv5057421,essv5146012,essv5006581,essv5037600,essv5116429,essv5021093,essv5021718,essv5052612,essv5140006,essv5048612,essv5089525,essv5031146,essv5152899,essv5131751,essv5085570,essv5047884,essv5151071,essv5143529,essv5036027,essv5066501,essv5049106,essv5017356,essv5124148,essv5147696,essv5009698,essv5094469,essv5096547,essv5106320,essv5020361,essv5099077,essv5110290,essv5077992,essv5010590,essv5086012,essv5058546,essv5136836,essv5055075,essv5040355,essv5005957,essv5155368,essv5156763,essv5079830,essv5006621,essv5045827,essv5028558,essv5043513,essv5063635,essv5101531,essv5149562,essv5160666,essv5040713,essv5100002,essv5041530,essv5097488,essv5031494,essv5068423,essv5127213,essv5111938,essv5035500,essv5073342,essv5148175,essv5109757,essv5091792,essv5142816,essv5151873,essv5007707,essv5070663,essv5058736,essv5015759,essv5089259,essv5043907,essv5095408,essv5114391,essv5019795,essv5084782,essv5159595,essv5065921,essv5108620,essv5054933,essv5064615,essv5045383,essv5148889,essv5117177,essv5069654,essv5098530,essv5082674,essv5130182,essv5085639,essv5082206,essv5054707,essv5156708,essv5042209,essv5122927,essv5153970,essv5007092,essv5076078,essv5052649,essv5113795,essv5017419,essv5142895,essv5142082,essv5037156,essv5100198,essv5013227,essv5134723,essv5057116,essv5095935,essv5024426,essv5143954,essv5059867,essv5061313,essv5058666,essv5103004,essv5147113,essv5010175,essv5066758,essv5160459,essv5096770,essv5120258,essv5122942,essv5028780,essv5054884,essv5018097,essv5153362,essv5135352,essv5085526,essv5033068,essv5145968,essv5102298,essv5139973,essv5005642,essv5050480,essv5083924,essv5119036,essv5020787,essv5121207,essv5079346,essv5136642,essv5075430,essv5154073,essv5006327,essv5047418,essv5066933,essv5080507,essv5130444,essv5019632,essv5073218,essv5122969,essv5094866,essv5055333,essv5057995 M 1184 200 452 GSTM1,GSTM2 NA06986,NA06989,NA06991,NA06993,NA06995,NA06997,NA07000,NA07022,NA07031,NA07051,NA07056,NA07346,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10853,NA10854,NA10855,NA10859,NA10861,NA10863,NA10865,NA11829,NA11830,NA11831,NA11832,NA11839,NA11843,NA11881,NA11882,NA11891,NA11893,NA11917,NA11918,NA11931,NA11992,NA11993,NA11994,NA12003,NA12043,NA12045,NA12056,NA12057,NA12144,NA12145,NA12155,NA12156,NA12234,NA12249,NA12264,NA12272,NA12275,NA12282,NA12286,NA12287,NA12336,NA12340,NA12342,NA12344,NA12347,NA12386,NA12413,NA12489,NA12708,NA12716,NA12718,NA12740,NA12748,NA12752,NA12753,NA12761,NA12762,NA12763,NA12766,NA12776,NA12777,NA12801,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12832,NA12842,NA12843,NA12864,NA12865,NA12872,NA12873,NA12874,NA12877,NA12889,NA12891,NA17962,NA17965,NA17966,NA17969,NA17970,NA17974,NA17976,NA17977,NA17979,NA17980,NA17986,NA17990,NA17993,NA17995,NA17997,NA18101,NA18102,NA18107,NA18112,NA18114,NA18117,NA18118,NA18120,NA18122,NA18124,NA18125,NA18127,NA18128,NA18131,NA18132,NA18134,NA18136,NA18138,NA18140,NA18144,NA18146,NA18147,NA18148,NA18149,NA18150,NA18151,NA18153,NA18154,NA18156,NA18157,NA18161,NA18162,NA18166,NA18485,NA18488,NA18498,NA18500,NA18501,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18515,NA18517,NA18519,NA18524,NA18526,NA18532,NA18536,NA18548,NA18555,NA18558,NA18559,NA18561,NA18562,NA18564,NA18571,NA18573,NA18592,NA18593,NA18599,NA18602,NA18603,NA18609,NA18610,NA18615,NA18617,NA18618,NA18620,NA18621,NA18622,NA18627,NA18628,NA18630,NA18633,NA18635,NA18636,NA18637,NA18638,NA18639,NA18641,NA18643,NA18645,NA18670,NA18674,NA18685,NA18696,NA18704,NA18740,NA18745,NA18747,NA18749,NA18757,NA18858,NA18860,NA18861,NA18863,NA18868,NA18871,NA18872,NA18873,NA18910,NA18913,NA18916,NA18923,NA18930,NA18933,NA18934,NA18939,NA18944,NA18945,NA18946,NA18949,NA18952,NA18953,NA18954,NA18956,NA18957,NA18959,NA18960,NA18961,NA18962,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18972,NA18973,NA18976,NA18977,NA18981,NA18993,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19001,NA19002,NA19005,NA19007,NA19038,NA19041,NA19044,NA19055,NA19062,NA19063,NA19064,NA19065,NA19066,NA19076,NA19077,NA19079,NA19080,NA19083,NA19084,NA19085,NA19086,NA19087,NA19088,NA19095,NA19096,NA19099,NA19101,NA19103,NA19107,NA19108,NA19109,NA19114,NA19116,NA19119,NA19120,NA19121,NA19123,NA19130,NA19131,NA19141,NA19142,NA19147,NA19149,NA19152,NA19153,NA19154,NA19161,NA19171,NA19172,NA19174,NA19178,NA19179,NA19182,NA19183,NA19189,NA19190,NA19198,NA19199,NA19200,NA19201,NA19202,NA19203,NA19204,NA19207,NA19211,NA19215,NA19221,NA19224,NA19226,NA19235,NA19237,NA19239,NA19240,NA19247,NA19249,NA19256,NA19257,NA19307,NA19309,NA19310,NA19311,NA19314,NA19315,NA19318,NA19327,NA19332,NA19346,NA19347,NA19350,NA19352,NA19359,NA19372,NA19380,NA19381,NA19384,NA19390,NA19393,NA19394,NA19398,NA19399,NA19428,NA19430,NA19434,NA19436,NA19437,NA19443,NA19449,NA19456,NA19457,NA19470,NA19471,NA19472,NA19473,NA19474,NA19651,NA19652,NA19653,NA19654,NA19656,NA19662,NA19665,NA19670,NA19676,NA19678,NA19679,NA19680,NA19683,NA19684,NA19700,NA19703,NA19704,NA19705,NA19708,NA19713,NA19716,NA19718,NA19720,NA19721,NA19725,NA19726,NA19746,NA19748,NA19749,NA19750,NA19751,NA19755,NA19757,NA19761,NA19770,NA19771,NA19772,NA19773,NA19774,NA19775,NA19776,NA19777,NA19778,NA19779,NA19782,NA19784,NA19788,NA19794,NA19796,NA19818,NA19819,NA19834,NA19835,NA19900,NA19901,NA19908,NA19909,NA19915,NA19916,NA19917,NA19918,NA19919,NA20126,NA20127,NA20281,NA20282,NA20284,NA20289,NA20292,NA20294,NA20295,NA20297,NA20302,NA20317,NA20319,NA20333,NA20334,NA20335,NA20340,NA20341,NA20343,NA20344,NA20345,NA20347,NA20348,NA20349,NA20356,NA20357,NA20358,NA20360,NA20364,NA20502,NA20504,NA20506,NA20512,NA20515,NA20516,NA20517,NA20519,NA20520,NA20524,NA20527,NA20530,NA20531,NA20535,NA20538,NA20539,NA20541,NA20542,NA20543,NA20544,NA20582,NA20588,NA20752,NA20753,NA20754,NA20755,NA20759,NA20760,NA20766,NA20769,NA20770,NA20771,NA20772,NA20774,NA20775,NA20783,NA20790,NA20797,NA20799,NA20801,NA20802,NA20804,NA20805,NA20806,NA20807,NA20809,NA20813,NA20816,NA20818,NA20819,NA20826,NA20828,NA20845,NA20849,NA20850,NA20852,NA20853,NA20858,NA20862,NA20866,NA20869,NA20871,NA20872,NA20873,NA20874,NA20875,NA20885,NA20887,NA20888,NA20890,NA20891,NA20892,NA20894,NA20895,NA20897,NA20899,NA20901,NA20903,NA20908,NA20910,NA20911,NA21086,NA21088,NA21099,NA21102,NA21104,NA21105,NA21107,NA21108,NA21111,NA21115,NA21116,NA21117,NA21123,NA21125,NA21137,NA21142,NA21297,NA21311,NA21313,NA21314,NA21316,NA21317,NA21318,NA21320,NA21333,NA21339,NA21352,NA21353,NA21357,NA21360,NA21361,NA21364,NA21366,NA21371,NA21379,NA21382,NA21385,NA21386,NA21389,NA21390,NA21391,NA21399,NA21402,NA21403,NA21404,NA21405,NA21414,NA21417,NA21418,NA21421,NA21434,NA21438,NA21439,NA21442,NA21448,NA21453,NA21454,NA21457,NA21473,NA21475,NA21476,NA21477,NA21480,NA21485,NA21486,NA21491,NA21493,NA21509,NA21510,NA21513,NA21519,NA21522,NA21523,NA21526,NA21574,NA21587,NA21599,NA21600,NA21613,NA21614,NA21615,NA21616,NA21617,NA21619,NA21620,NA21648,NA21678,NA21682,NA21685,NA21686,NA21693,NA21723,NA21733,NA21739,NA21740,NA21741,NA21784,NA21825,NA21826 nsv442967 1 110025907 110044476 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617142,nssv1616932,nssv1616955,nssv1616944,nssv1617033,nssv1616950,nssv1616971,nssv1617029,nssv1616984,nssv1616951,nssv1616992,nssv1617007,nssv1617128,nssv1617105,nssv1617011,nssv1617049,nssv1617150,nssv1617171,nssv1617034,nssv1616962,nssv1616999,nssv1617068,nssv1617062,nssv1617025,nssv1616938,nssv1617120,nssv1616963,nssv1617143,nssv1616937,nssv1617073,nssv1617054,nssv1616976,nssv1617149,nssv1617004,nssv1616929,nssv1617104,nssv1617118,nssv1616979,nssv1617027,nssv1616965,nssv1617131,nssv1617065,nssv1617090,nssv1617086,nssv1617071,nssv1617018,nssv1616981,nssv1616985,nssv1616942,nssv1617132,nssv1617130,nssv1617037,nssv1616957,nssv1617107,nssv1617076,nssv1616967,nssv1617127,nssv1617140,nssv1617070,nssv1617081,nssv1617028,nssv1617147,nssv1617072,nssv1617003,nssv1617036,nssv1617167,nssv1617083,nssv1617139,nssv1617122,nssv1617077,nssv1617101,nssv1616945,nssv1617064,nssv1616922,nssv1617019,nssv1617096,nssv1617163,nssv1616995,nssv1617115,nssv1617022,nssv1617158,nssv1617030,nssv1617006,nssv1616975,nssv1617137,nssv1617000,nssv1616934,nssv1617040,nssv1617093,nssv1617012,nssv1617138,nssv1616925,nssv1617045,nssv1616977,nssv1617092,nssv1616993,nssv1616989,nssv1617061,nssv1616982,nssv1616941,nssv1617110,nssv1616988,nssv1617123,nssv1617175,nssv1617043,nssv1616986,nssv1617119,nssv1617026,nssv1617153,nssv1617055,nssv1617085,nssv1616994,nssv1617008,nssv1617032,nssv1616930,nssv1617044,nssv1616928,nssv1617059,nssv1617117,nssv1617121,nssv1617042,nssv1616997,nssv1617074,nssv1617066,nssv1617087,nssv1616998,nssv1616978,nssv1617078,nssv1616936,nssv1617112,nssv1616933,nssv1616940,nssv1617021,nssv1616959,nssv1616943,nssv1616974,nssv1617020,nssv1616970,nssv1617141,nssv1616931,nssv1617089,nssv1616926,nssv1616968,nssv1617174,nssv1617129,nssv1617170,nssv1617017,nssv1617162,nssv1617172,nssv1617094,nssv1617106,nssv1617041,nssv1617152,nssv1617015,nssv1617047,nssv1617053,nssv1617095,nssv1616939,nssv1617165,nssv1617151,nssv1616923,nssv1617099,nssv1617164,nssv1617039,nssv1617125,nssv1617050,nssv1617010,nssv1617038,nssv1617114,nssv1617109,nssv1617052,nssv1617031,nssv1617048,nssv1617075,nssv1616921,nssv1617067,nssv1617097,nssv1617056,nssv1616987,nssv1616972,nssv1617148,nssv1616973,nssv1616964,nssv1616949,nssv1617144,nssv1617136,nssv1617116,nssv1617100,nssv1616948,nssv1617005,nssv1617126,nssv1617098,nssv1616960,nssv1617063,nssv1617173,nssv1616990,nssv1617023,nssv1616927,nssv1617001,nssv1617051,nssv1616983,nssv1617108,nssv1616953,nssv1617154,nssv1617156,nssv1617159,nssv1617134,nssv1616996,nssv1617084,nssv1617009,nssv1617060,nssv1616954,nssv1616952,nssv1617103,nssv1616961,nssv1617016,nssv1616956,nssv1617088,nssv1617014,nssv1616920,nssv1617166,nssv1617079,nssv1617155,nssv1617133,nssv1617082,nssv1617145,nssv1617111,nssv1617160,nssv1617161,nssv1616966 M 270 0 230 GSTM1,GSTM2 NA06985,NA06994,NA07019,NA07022,NA07029,NA07034,NA07048,NA07055,NA07056,NA07345,NA07348,NA07357,NA10830,NA10831,NA10835,NA10838,NA10839,NA10846,NA10847,NA10851,NA10854,NA10855,NA10856,NA10857,NA10859,NA10860,NA10861,NA10863,NA11830,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12005,NA12006,NA12043,NA12044,NA12056,NA12057,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12707,NA12716,NA12717,NA12740,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12762,NA12763,NA12801,NA12802,NA12812,NA12813,NA12814,NA12864,NA12865,NA12872,NA12873,NA12874,NA12875,NA12878,NA12891,NA12892,NA18502,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18516,NA18521,NA18522,NA18523,NA18524,NA18526,NA18529,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18622,NA18624,NA18632,NA18633,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18857,NA18859,NA18862,NA18870,NA18912,NA18913,NA18914,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19007,NA19012,NA19092,NA19093,NA19094,NA19102,NA19116,NA19119,NA19120,NA19127,NA19128,NA19129,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19173,NA19192,NA19193,NA19194,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19221,NA19222,NA19223,NA19238 dgv271n100 1 110025938 110038458 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003418,nsv1013832,nsv1005414,nsv1010258,nsv1002620 M 29084 0 9 GSTM1,GSTM2 dgv3n47 1 110027143 110046509 CNV loss Kidd_et_al_2010b 21111241 Sequencing nsv498681,nsv498682 M 9 0 2 GSTM1,GSTM2 dgv272n100 1 110027153 110054653 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009135,nsv1008557,nsv1005433,nsv1013141,nsv1010300 M 29084 6 8 GSTM1,GSTM2 dgv273n100 1 110027651 110058147 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002827,nsv1014978,nsv1010368,nsv1002678,nsv1013002,nsv1004591 M 29084 0 13 GSTM1,GSTM2,GSTM5 nsv1003914 1 110028254 110085822 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485947 M 29084 1 0 GSTM1,GSTM3,GSTM5 esv3381843 1 110029252 110036450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691747 M 185 1 0 GSTM1 NA19240 esv2530591 1 110029634 110049003 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5331264 M 1 0 1 GSTM1 NA18507 dgv66n67 1 110029868 110041912 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824098,nsv824109 M 31 2 0 GSTM1 NA18570,NA18972 nsv437937 1 110030105 110037055 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv467875,nssv467864 M 269 0 2 GSTM1 NA12043,NA12264 nsv435675 1 110030649 110042911 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466217 M 2 0 1 GSTM1 NA15510 nsv482092 1 110031941 110037889 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558453 M 1 1 0 GSTM1 KB1 dgv500n54 1 110032359 110057743 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547488,nsv547490,nsv547489 M 17421 3 0 GSTM1,GSTM5 esv33243 1 110033049 110041457 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv92895,essv97498,essv92566,essv93715,essv96522,essv100472,essv94557,essv98783,essv97395,essv96696,essv101252,essv94810,essv94466,essv99537,essv93853,essv98284,essv95667,essv99101 M 51 18 0 GSTM1 21606,21616,21618,21634,21772,21791,21808,21841,21879,21932,21938,21939,21972,22011,22233,22261,22298,22335 dgv274n100 1 110034485 110047641 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999409,nsv1005251 M 29084 0 9 GSTM1 nsv1000726 1 110034485 110047641 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496164,nssv3495935,nssv3484616,nssv3501409,nssv3497082,nssv3489326,nssv3489196,nssv3499133,nssv3484827,nssv3702386,nssv3498647,nssv3484843,nssv3491257,nssv3489206,nssv3491017,nssv3491961,nssv3495570,nssv3487682,nssv3495263,nssv3495644,nssv3494404,nssv3495721,nssv3485342,nssv3702391,nssv3488760,nssv3497931,nssv3490380,nssv3498640,nssv3497081,nssv3702398,nssv3499771,nssv3486106,nssv3501734,nssv3490826,nssv3492917,nssv3502083,nssv3485907,nssv3493999,nssv3498423,nssv3493100,nssv3493175,nssv3496908,nssv3498603,nssv3485862,nssv3497830,nssv3500172,nssv3492131,nssv3499375,nssv3702390,nssv3494280,nssv3486681,nssv3702388,nssv3702387,nssv3485845,nssv3483016,nssv3502404,nssv3490718,nssv3487140,nssv3492093,nssv3486124,nssv3501220,nssv3499664,nssv3489514,nssv3486401,nssv3483255,nssv3484179,nssv3484141,nssv3486144,nssv3702389,nssv3492489,nssv3498048,nssv3497049,nssv3489802,nssv3498733,nssv3483091,nssv3501860,nssv3483608,nssv3490386,nssv3488973,nssv3489241,nssv3502644,nssv3490498,nssv3501929,nssv3487367,nssv3702397,nssv3495264,nssv3486103,nssv3491422,nssv3496127,nssv3497461,nssv3500138,nssv3488441,nssv3499917,nssv3702393,nssv3491029,nssv3494824,nssv3500246,nssv3493305,nssv3500424,nssv3499138,nssv3492061,nssv3492527,nssv3486086,nssv3497939,nssv3491022,nssv3493365,nssv3490763,nssv3496769,nssv3495688,nssv3491987,nssv3497167,nssv3490109,nssv3493639,nssv3702392,nssv3488480,nssv3501124,nssv3485071,nssv3500035,nssv3502215,nssv3499780,nssv3492265,nssv3490538,nssv3484437,nssv3496711,nssv3501194,nssv3497911,nssv3482828,nssv3494743,nssv3501301,nssv3502288,nssv3498334,nssv3485467,nssv3487126,nssv3702396,nssv3702394,nssv3490352,nssv3488117,nssv3489352,nssv3495527,nssv3702395,nssv3492367,nssv3483370,nssv3495974,nssv3488216,nssv3492827,nssv3498779,nssv3490618,nssv3485724,nssv3496884,nssv3485475,nssv3500617,nssv3499459,nssv3498060,nssv3483860,nssv3499488,nssv3501905,nssv3495008,nssv3490471,nssv3487798,nssv3485519,nssv3492591,nssv3491922,nssv3498226,nssv3491551,nssv3702385,nssv3485585,nssv3484828,nssv3493248,nssv3499856,nssv3484365,nssv3485492,nssv3495378,nssv3483154,nssv3496142,nssv3488491,nssv3483311,nssv3702400,nssv3493701,nssv3487179,nssv3498865,nssv3497432,nssv3702399,nssv3495633,nssv3502695,nssv3493803,nssv3489705,nssv3483809,nssv3486907,nssv3487202,nssv3499645,nssv3483238,nssv3501089,nssv3499000,nssv3492211,nssv3486946,nssv3489050,nssv3502551,nssv3484867,nssv3488835,nssv3493608,nssv3489400,nssv3483378,nssv3487840,nssv3499644,nssv3489677,nssv3495481,nssv3483684,nssv3498925,nssv3496627,nssv3485948,nssv3492611,nssv3496254,nssv3483407,nssv3498474,nssv3496824,nssv3489643,nssv3491966,nssv3494733,nssv3491565,nssv3702378,nssv3495175,nssv3491361,nssv3498219,nssv3494181,nssv3495640,nssv3494601,nssv3493804,nssv3502434,nssv3483455,nssv3499112,nssv3491595,nssv3489851,nssv3498028,nssv3502324,nssv3702384,nssv3487981,nssv3493207,nssv3702377,nssv3491136,nssv3501531,nssv3490671,nssv3483523,nssv3488194,nssv3495102,nssv3502564,nssv3489536,nssv3485875,nssv3492694,nssv3496611,nssv3702376,nssv3497699,nssv3497147,nssv3496994,nssv3702375,nssv3702374,nssv3496993,nssv3486215,nssv3500879,nssv3499796,nssv3497926,nssv3494459,nssv3702380,nssv3483654,nssv3491044,nssv3491826,nssv3493585,nssv3495336,nssv3485960,nssv3494584,nssv3702379,nssv3501955,nssv3496110,nssv3499389,nssv3702383,nssv3496559,nssv3499584,nssv3496831,nssv3492318,nssv3500372,nssv3484899,nssv3491858,nssv3702381,nssv3499978,nssv3487848,nssv3485739,nssv3702382,nssv3501900,nssv3498877,nssv3486220,nssv3485961,nssv3496306,nssv3485564,nssv3491752,nssv3489448,nssv3493660,nssv3495680,nssv3501670 M 29084 98 199 GSTM1 nsv1003898 1 110034485 110052668 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501448,nssv3491704,nssv3482891 M 29084 3 0 GSTM1 dgv275n100 1 110034485 110054653 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001968,nsv999912,nsv1010810,nsv1014873,nsv998493 M 29084 23 39 GSTM1 dgv276n100 1 110034485 110058147 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998361,nsv1013915,nsv1008867,nsv998943 M 29084 0 6 GSTM1,GSTM5 esv3584594 1 110034497 110036151 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838301,essv9838290,essv9838323,essv9838312,essv9838334 M 34 0 5 GSTM1 1WS,2RB,3LK,B10,B4 esv3584928 1 110034497 110044476 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838200,essv9838203,essv9838202 M 34 3 0 GSTM1 KSF008,KSF024,KSM003 nsv1007399 1 110035742 110070351 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492669 M 29084 0 1 GSTM1,GSTM5 nsv2332 1 110035790 110059006 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1317 M 9 1 0 GSTM1,GSTM5 NA19240 esv3378880 1 110037052 110038150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691748 M 185 1 0 GSTM1 NA19240 esv3401099 1 110038752 110040850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691749 M 185 1 0 "" NA19240 esv3379792 1 110041352 110045050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691750 M 185 1 0 "" NA19240 nsv547491 1 110050887 110057743 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722243 M 17421 1 0 GSTM5 dgv501n54 1 110053995 110057743 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547493,nsv547492 M 17421 8 0 GSTM5 dgv502n54 1 110053995 110059051 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547494,nsv547496,nsv547497 M 17421 4 0 GSTM5 nsv547495 1 110054185 110057743 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722254,nssv722253 M 17421 1 1 GSTM5 esv3439252 1 110103352 110106650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691754 M 185 1 0 EPS8L3 NA19240 nsv522988 1 110108963 110111889 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698658 M 2026 1 0 "" esv33961 1 110150217 110150989 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv93391 M 51 1 0 "" 22170 esv1002396 1 110154158 110157166 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564925 M 3 0 1 "" HuRef nsv997566 1 110173671 110220377 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484210 M 29084 1 0 "" esv275219 1 110217149 110218390 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2586043,essv2586081 M 1250 1 1 "" nsv475945 1 110289615 110289615 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011636 M 9 1 0 "" NA12878 esv3305044 1 110350031 110350032 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7762957,essv7752598 M 185 2 0 AHCYL1 NA07037,NA12249 esv3440155 1 110350043 110350112 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8900943,essv8900942 M 185 2 0 AHCYL1 NA07037,NA12249 nsv475214 1 110409077 110409077 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016641 M 9 1 0 ALX3 NA19240 nsv824120 1 110422478 110427020 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431091 M 31 0 1 "" AK18 nsv2343 1 110433761 110469485 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5774,nssv4489,nssv3043 M 9 3 0 UBL4B NA12878,NA18555,NA19129 nsv509424 1 110448217 110479014 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619811,nssv621099 M 4 2 0 UBL4B NA10860,NA15510 esv3432686 1 110464591 110464983 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652035 M 185 1 0 "" NA19240 nsv2354 1 110492926 110524622 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4499 M 9 1 0 SLC6A17 NA12878 nsv2365 1 110512279 110521167 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6809 M 9 0 1 SLC6A17 NA12156 esv991777 1 110552100 110556998 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565663 M 3 0 1 KCNC4 HuRef esv3350680 1 110598768 110598768 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8822747 M 185 1 0 "" NA12878 nsv946135 1 110638362 110641398 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782470,nssv1782513,nssv1782469,nssv1782503,nssv1782545,nssv1782559,nssv1782544,nssv1782518,nssv1782477,nssv1782560,nssv1782471,nssv1782507,nssv1782550,nssv1782496,nssv1782478,nssv1782509,nssv1782494,nssv1782525,nssv1782479,nssv1782534,nssv1782485,nssv1782556,nssv1782487,nssv1782537,nssv1782481,nssv1782514,nssv1782486,nssv1782508,nssv1782482,nssv1782504,nssv1782491,nssv1782521,nssv1782552,nssv1782542,nssv1782490,nssv1782523,nssv1782474,nssv1782499,nssv1782488,nssv1782553,nssv1782547,nssv1782519,nssv1782543,nssv1782515,nssv1782497,nssv1782530,nssv1782473,nssv1782532,nssv1782475,nssv1782538,nssv1782472,nssv1782522,nssv1782495,nssv1782517,nssv1782546,nssv1782555,nssv1782548,nssv1782510,nssv1782476,nssv1782501,nssv1782483,nssv1782533,nssv1782549,nssv1782539,nssv1782551,nssv1782493,nssv1782484,nssv1782540,nssv1782480,nssv1782536,nssv1782467,nssv1782528,nssv1782468,nssv1782506,nssv1782492,nssv1782502,nssv1782562,nssv1782557,nssv1782516,nssv1782531,nssv1782520,nssv1782505,nssv1782526,nssv1782558,nssv1782561,nssv1782466,nssv1782527,nssv1782500,nssv1782498,nssv1782512,nssv1782489,nssv1782535,nssv1782554,nssv1782524,nssv1782511,nssv1782541,nssv1782529 M 97 10 0 LOC440600 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1001876 1 110654299 110654299 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575182 M 3 1 0 LOC440600 HuRef esv3310454 1 110654301 110654301 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843411 M 185 1 0 LOC440600 NA12878 esv3330024 1 110654302 110654302 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701355 M 185 1 0 LOC440600 NA12878 esv3334121 1 110665511 110665546 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863740 M 185 1 0 LOC440600 NA12005 nsv946137 1 110690260 110690970 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780837,nssv1780877,nssv1783496,nssv1780903,nssv1782566,nssv1780838,nssv1780891,nssv1780847,nssv1780894,nssv1780835,nssv1780898,nssv1780858,nssv1780831,nssv1780855,nssv1783505,nssv1780888,nssv1780833,nssv1780851,nssv1783501,nssv1780866,nssv1783498,nssv1780860,nssv1780832,nssv1780861,nssv1780841,nssv1780849,nssv1783503,nssv1780856,nssv1783499,nssv1780870,nssv1780843,nssv1780876,nssv1783497,nssv1780850,nssv1783502,nssv1780845,nssv1780836,nssv1780842,nssv1780892,nssv1780901,nssv1780834,nssv1780904,nssv1780895,nssv1780884,nssv1783492,nssv1780852,nssv1780893,nssv1780844,nssv1780897,nssv1780874,nssv1783495,nssv1780867,nssv1780890,nssv1780848,nssv1782567,nssv1780839,nssv1780889,nssv1780885,nssv1783493,nssv1780857,nssv1780896,nssv1780899,nssv1783504,nssv1780880,nssv1783500,nssv1780902,nssv1782565,nssv1780871,nssv1780840,nssv1780869,nssv1783494,nssv1780853,nssv1782564,nssv1780906,nssv1780886,nssv1780846,nssv1780900,nssv1780854,nssv1780862,nssv1780882,nssv1780881,nssv1780864,nssv1780907,nssv1780863,nssv1780865,nssv1780878,nssv1780887,nssv1780868,nssv1780908,nssv1780872,nssv1780859,nssv1782563,nssv1780875,nssv1780905,nssv1780873,nssv1780883,nssv1780879 M 97 10 0 RBM15 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv8910 1 110703607 110704378 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv31351 M 1 0 0 "" esv3346908 1 110724205 110724218 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863741 M 185 1 0 SLC16A4 NA12005 esv33312 1 110756363 110759664 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98930 M 51 0 1 LAMTOR5-AS1 21606 nsv475709 1 110783798 110783798 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017492 M 9 1 0 "" NA12878 nsv1006346 1 110821297 110944668 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702409,nssv3702410 M 29084 2 0 CYMP,KCNA10,KCNA2,LOC440602 nsv519826 1 110831091 110838240 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv662944,nssv658959 M 2026 0 2 CYMP,LOC440602 nsv524174 1 110836697 110840363 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700055 M 2026 0 1 "" nsv547498 1 110836697 110862585 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722258 M 17421 0 1 KCNA10 esv2359053 1 110913598 110914117 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4577443 M 1 0 1 "" NA18507 nsv547499 1 110925259 110962533 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722259 M 17421 0 1 KCNA2 nsv522839 1 110956801 110962533 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698491 M 2026 1 0 KCNA2 nsv520458 1 110972901 110988307 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697433 M 2026 0 1 KCNA2 nsv2376 1 111077512 111090637 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6819 M 9 0 1 "" NA12156 nsv517897 1 111097197 111109444 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695306 M 2026 1 0 "" nsv831037 1 111114601 111255401 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448706 M 95 1 0 CD53 esv2023242 1 111117775 111118239 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4921577 M 1 0 1 "" NA18507 esv3839 1 111117881 111118148 CNV loss Wang_et_al_2008 18987735 Sequencing essv26280 M 1 0 1 "" YH nsv998142 1 111130589 111167613 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702411 M 29084 1 0 "" nsv517082 1 111142680 111189246 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv693157,nssv665831,nssv675715,nssv684074,nssv657151,nssv666607,nssv669952,nssv658200,nssv659322,nssv677166,nssv669208,nssv678027,nssv685083,nssv669084,nssv681365,nssv678386,nssv658116,nssv678960,nssv685594,nssv671738,nssv682619,nssv661553,nssv663114,nssv676135,nssv684988,nssv658242,nssv657335,nssv690491,nssv673134,nssv660366,nssv681709,nssv657015,nssv659236,nssv675662,nssv692305,nssv677049,nssv668839,nssv688099,nssv670525,nssv679263,nssv654031,nssv673328,nssv686345,nssv671864,nssv652389,nssv660616,nssv675534,nssv655379,nssv658402,nssv676974,nssv672411,nssv684384,nssv669991,nssv672559,nssv658006,nssv663874,nssv666710,nssv682688,nssv686152,nssv652852,nssv664346,nssv660264,nssv692507,nssv662372,nssv658960,nssv665790,nssv663597,nssv658924,nssv691096,nssv691932,nssv661130,nssv691595,nssv688819,nssv668523,nssv690669,nssv668892,nssv660532,nssv689997,nssv681546,nssv676916,nssv691006,nssv680869,nssv652359,nssv663019,nssv667611,nssv688302,nssv664516,nssv663457,nssv665352,nssv659814,nssv674503,nssv659586,nssv661484,nssv684898,nssv676167,nssv677998,nssv691361,nssv675397,nssv693561,nssv688806,nssv676535,nssv683037,nssv687625,nssv690429,nssv652041,nssv684087,nssv658909,nssv677888,nssv655053,nssv690543,nssv673105,nssv665832,nssv669488,nssv679819,nssv656767,nssv655875,nssv683550,nssv656298,nssv670219,nssv685935,nssv670794,nssv665721,nssv657406,nssv668653,nssv652646,nssv663435,nssv701118,nssv651924,nssv690594,nssv680029,nssv682161,nssv680182,nssv687340,nssv671485,nssv659517,nssv653810,nssv668036,nssv688490,nssv682012,nssv674450,nssv705563,nssv653759,nssv659461,nssv680899,nssv687950,nssv678159,nssv661437,nssv688628,nssv685787,nssv684777,nssv684124,nssv692640,nssv690382,nssv669896,nssv662181,nssv656225,nssv685833,nssv657972,nssv651734,nssv688319 M 2026 12 148 "" nsv508482 1 111153690 111199095 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618982,nssv620140 M 4 0 2 "" NA10860,NA15510 nsv437237 1 111158364 111184498 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467118 M 60 0 1 "" NA18854 dgv277n100 1 111161246 111189737 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999923,nsv997745,nsv1014594,nsv1004905 M 29084 0 8 "" esv2764211 1 111161258 111195028 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006088,essv7006143,essv7006064,essv7006075,essv7006131,essv7006050,essv7006056,essv7006052,essv7006091,essv7006138,essv7006137,essv7006110,essv7006101,essv7006128,essv7006095,essv7006112,essv7006134,essv7006117,essv7006125,essv7006037,essv7006085,essv7006141,essv7006041,essv7006063,essv7006047,essv7006124,essv7006068,essv7006042,essv7006073,essv7006048,essv7006086,essv7006103,essv7006123,essv7006135,essv7006130,essv7006118,essv7006139,essv7006105,essv7006107,essv7006084,essv7006072,essv7006136,essv7006102,essv7006062,essv7006129,essv7006087,essv7006113,essv7006065,essv7006097,essv7006057,essv7006108,essv7006069,essv7006051,essv7006090,essv7006145,essv7006127,essv7006070,essv7006126,essv7006109,essv7006142,essv7006114,essv7006081,essv7006082,essv7006120,essv7006054,essv7006038,essv7006046,essv7006140,essv7006080,essv7006106,essv7006060,essv7006045,essv7006093,essv7006096,essv7006121,essv7006079,essv7006098,essv7006067,essv7006040,essv7006039,essv7006092,essv7006132,essv7006099,essv7006115,essv7006094,essv7006076,essv7006043,essv7006119,essv7006071,essv7006083,essv7006061,essv7006059,essv7006053,essv7006116,essv7006074,essv7006058,essv7006104,essv7006049 M 1109 0 95 "" RW_0002,RW_0012,RW_0013,RW_0017,RW_0022,RW_0028,RW_0029,RW_0030,RW_0039,RW_0063,RW_0065,RW_0071,RW_0077,RW_0078,RW_0088,RW_0098,RW_0103,RW_0107,RW_0115,RW_0120,RW_0129,RW_0131,RW_0134,RW_0136,RW_0137,RW_0139,RW_0143,RW_0147,RW_0148,RW_0152,RW_0162,RW_0168,RW_0170,RW_0174,RW_0179,RW_0180,RW_0185,RW_0212,RW_0215,RW_0220,RW_0230,RW_0235,RW_0238,RW_0239,RW_0248,RW_0254,RW_0256,RW_0266,RW_0279,RW_0292,RW_0299,RW_0305,RW_0322,RW_0329,RW_0330,RW_0331,RW_0341,RW_0349,RW_0500,RW_0515,RW_0519,RW_0522,RW_0524,RW_0530,RW_0531,RW_0538,RW_0541,RW_0544,RW_0546,RW_0575,RW_0578,RW_0583,RW_0585,RW_0590,RW_0593,RW_0600,RW_0601,RW_0603,RW_0607,RW_0608,RW_0610,RW_0611,RW_0614,RW_0615,RW_0616,RW_0621,RW_0629,RW_0630,RW_0632,RW_0633,RW_0639,RW_0644,RW_0662,RW_0665,RW_0669 nsv436958 1 111161325 111195236 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466839 M 60 0 1 "" NA10860 nsv436969 1 111161325 111214435 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466850 M 60 0 1 "" NA10835 dgv278n100 1 111167613 111189737 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998946,nsv1001583,nsv1006013,nsv1007401,nsv999886 M 29084 0 18 "" nsv2387 1 111170391 111196092 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9566,nssv1328,nssv9324 M 9 0 3 "" NA18507,NA18517,NA19240 nsv1011436 1 111171895 111185483 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491208 M 29084 1 0 "" dgv503n54 1 111171895 111189621 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547502,nsv547501,nsv547500,nsv547509,nsv547504,nsv547503,nsv547507,nsv547506,nsv547505,nsv547508 M 17421 0 26 "" esv2762298 1 111171895 111193590 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994090,essv6993578,essv6994334,essv6993800,essv6994011,essv6993833,essv6994101,essv6994123,essv6993967,essv6994301,essv6993745,essv6993900,essv6994022,essv6994066,essv6994367,essv6993989,essv6994044,essv6993645,essv6994400,essv6994079,essv6994345,essv6993889,essv6993778,essv6993611,essv6993878,essv6993622,essv6993589,essv6994378,essv6994112,essv6993722,essv6993933,essv6993955,essv6994412,essv6994289,essv6994156,essv6994167,essv6994234,essv6994256,essv6994312,essv6993600,essv6993867,essv6994212,essv6994145,essv6993678,essv6993545,essv6994033,essv6993634,essv6994356,essv6993822,essv6994134,essv6993811,essv6994000,essv6994245,essv6993656,essv6993922,essv6993700,essv6993689,essv6994389,essv6993711,essv6993667,essv6994278,essv6994323,essv6993944,essv6993789,essv6993978,essv6994223,essv6994055,essv6993567,essv6993844,essv6994190,essv6994178,essv6993756,essv6994267,essv6993911,essv6993856,essv6993767,essv6993556,essv6994201,essv6993733 M 1109 0 79 "" SW_0073,SW_0085,SW_0090,SW_0099,SW_0159,SW_0176,SW_0185,SW_0189,SW_0198,SW_0199,SW_0211,SW_0215,SW_0538,SW_0570,SW_0581,SW_0593,SW_0606,SW_0620,SW_0628,SW_0636,SW_0638,SW_0659,SW_0716,SW_0773,SW_0775,SW_0822,SW_0837,SW_0843,SW_0890,SW_1000,SW_1003,SW_1012,SW_1018,SW_1026,SW_1029,SW_1031,SW_1043,SW_1049,SW_1053,SW_1060,SW_1064,SW_1068,SW_1073,SW_1086,SW_1093,SW_1105,SW_1127,SW_1132,SW_1137,SW_1138,SW_1152,SW_1162,SW_1170,SW_1172,SW_1188,SW_1209,SW_1225,SW_1264,SW_1273,SW_1285,SW_1290,SW_1292,SW_1299,SW_1302,SW_1324,SW_1341,SW_1354,SW_1355,SW_1405,SW_1406,SW_1413,SW_1422,SW_1455,SW_1457,SW_1469,SW_1470,SW_1482,SW_1503,SW_1539 nsv1005320 1 111171895 111196389 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490529 M 29084 0 1 "" dgv279n100 1 111175616 111189737 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002747,nsv1000934,nsv1000239,nsv1003111,nsv1004532,nsv1007701,nsv1002583,nsv1013418,nsv1003333,nsv1008735 M 29084 0 1224 "" esv3894012 1 111176350 111189246 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25798358,essv25784698,essv25778309,essv25778623,essv25786629,essv25786368,essv25786800,essv25781966,essv25778319,essv25787238,essv25785419,essv25798666,essv25784060,essv25800482,essv25786712,essv25800987,essv25800231,essv25783731,essv25786212,essv25779798,essv25781204,essv25780378,essv25779086,essv25785690,essv25800573,essv25780926,essv25778335,essv25800662,essv25801550 M 3017 0 29 "" nsv818334 1 111176350 111189246 CNV loss Wang_et_al_2007 17921354 SNP array nssv1418130,nssv1418131 M 112 0 2 "" NA19143,NA19145 nsv437238 1 111176629 111195236 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467119 M 60 0 1 "" NA18857 dgv280n100 1 111177077 111196633 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004211,nsv998196,nsv1005735,nsv1013055,nsv1001829,nsv1012651,nsv1014581,nsv1010660,nsv1000346,nsv1003918,nsv1002071,nsv1004409,nsv1007044,nsv1009072,nsv1014628 M 29084 0 78 "" esv2431691 1 111177097 111191040 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5163663 M 1 0 1 "" NA18507 esv2460496 1 111177608 111190902 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5254911 M 1 0 1 "" NA18507 nsv10628 1 111177769 111190791 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16413,nssv16416,nssv16748,nssv18070,nssv21404,nssv17431 M 31 0 6 "" NA07048,NA10863,NA12155,NA12802,NA18517,NA19240 nsv498683 1 111178404 111190478 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585396 M 9 0 1 "" esv2421811 1 111178889 111189749 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5018408,essv5108534,essv5136996,essv5098058,essv5144841,essv5097329,essv5020136,essv5047671,essv5016190,essv5110800,essv5027247,essv5117127,essv5064839,essv5113784,essv5065935,essv5134077,essv5013165,essv5134799,essv5005943,essv5003260,essv5151657,essv5027831,essv5126964,essv5016850,essv5125099,essv5079351,essv5032454,essv5017670,essv5112849,essv5136683,essv5024515,essv5102380,essv5126456,essv5067832,essv5069676,essv5004809,essv5023055,essv5107304,essv5113401,essv5053847,essv5038925,essv5095257,essv5069111,essv5149859,essv5100027,essv5082271,essv5123391,essv5143696,essv5114016,essv5143839,essv5034418,essv5033703,essv5020454,essv5054557,essv5086752,essv5049989,essv5145557,essv5118608,essv5149446,essv5058642,essv5074198,essv5152541,essv5040625,essv5022682,essv5010482,essv5151455,essv5129909,essv5091907,essv5028180,essv5078745,essv5006690,essv5094026,essv5006320,essv5016908,essv5029311,essv5159384,essv5014770,essv5125060,essv5022343,essv5158893,essv5132618,essv5118414,essv5003152,essv5078816,essv5035383,essv5097336,essv5080812,essv5040082,essv5067023,essv5076136,essv5125652,essv5140275,essv5157520,essv5063035,essv5155752,essv5009939,essv5151102,essv5142441,essv5078034,essv5028034,essv5006964,essv5101324,essv5091402,essv5028593,essv5004389,essv5106393,essv5130652,essv5054487,essv5066833,essv5107228,essv5112402,essv5126596,essv5081542,essv5149142,essv5012583,essv5014327,essv5038694,essv5011107,essv5096034,essv5015109,essv5057418,essv5125610,essv5114751,essv5155720,essv5075405,essv5030597,essv5118663,essv5083293,essv5131013,essv5138226,essv5017003,essv5136816,essv5127117,essv5002143,essv5008375,essv5061270,essv5085082,essv5024349,essv5137902,essv5024453,essv5036219,essv5066841,essv5036946,essv5144674,essv5011072,essv5080024,essv5132322,essv5149435,essv5011290,essv5110669,essv5080248,essv5060289,essv5085471,essv5069606,essv5038893,essv5026334,essv5119081,essv5035160,essv5021089,essv5031724,essv5054668,essv5114071,essv5050683,essv5062152,essv5084191,essv5135244,essv5032827,essv5074883,essv5143856,essv5154491,essv5023791,essv5078333,essv5138759,essv5092408,essv5120114,essv5067887,essv5098555,essv5012273,essv5121968,essv5104158,essv5112640,essv5039085,essv5121380,essv5095812,essv5142578,essv5158424,essv5158392,essv5039328,essv5149418,essv5122510,essv5094152,essv5006402,essv5085618,essv5102661,essv5028645,essv5114250 M 1184 0 196 "" NA06986,NA06991,NA06993,NA06997,NA07045,NA07055,NA07347,NA07357,NA10835,NA10843,NA10859,NA10861,NA10863,NA11882,NA11920,NA11992,NA11995,NA12003,NA12145,NA12155,NA12249,NA12264,NA12335,NA12340,NA12343,NA12348,NA12763,NA12767,NA12775,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12875,NA18484,NA18485,NA18488,NA18489,NA18506,NA18507,NA18515,NA18516,NA18517,NA18682,NA18852,NA18854,NA18855,NA18857,NA18861,NA18863,NA18867,NA18868,NA18869,NA18873,NA18874,NA18875,NA18909,NA18911,NA18913,NA18914,NA18916,NA18924,NA18930,NA19036,NA19038,NA19044,NA19101,NA19103,NA19107,NA19109,NA19116,NA19117,NA19118,NA19120,NA19137,NA19140,NA19141,NA19142,NA19143,NA19146,NA19148,NA19150,NA19151,NA19174,NA19178,NA19179,NA19180,NA19182,NA19183,NA19190,NA19191,NA19197,NA19199,NA19200,NA19201,NA19202,NA19206,NA19208,NA19209,NA19224,NA19225,NA19236,NA19239,NA19240,NA19317,NA19318,NA19377,NA19382,NA19385,NA19434,NA19436,NA19444,NA19455,NA19466,NA19472,NA19473,NA19474,NA19649,NA19650,NA19661,NA19708,NA19759,NA19835,NA19836,NA19900,NA19908,NA19909,NA19916,NA19919,NA19921,NA20289,NA20290,NA20294,NA20295,NA20297,NA20337,NA20341,NA20346,NA20347,NA20348,NA20515,NA20544,NA20588,NA20758,NA20759,NA20786,NA20799,NA20804,NA20808,NA20815,NA20847,NA20850,NA20852,NA20866,NA20870,NA20874,NA20879,NA20883,NA20890,NA20894,NA20896,NA20898,NA20904,NA21086,NA21104,NA21112,NA21115,NA21117,NA21118,NA21297,NA21303,NA21336,NA21339,NA21353,NA21371,NA21390,NA21391,NA21421,NA21510,NA21512,NA21513,NA21520,NA21526,NA21527,NA21529,NA21608,NA21611,NA21614,NA21615,NA21647,NA21686,NA21689,NA21722,NA21776 nsv442974 1 111179088 111189749 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617179,nssv1617214,nssv1617209,nssv1617220,nssv1617217,nssv1617218,nssv1617221,nssv1617222,nssv1617189,nssv1617193,nssv1617196,nssv1617203,nssv1617205,nssv1617208,nssv1617237,nssv1617206,nssv1617233,nssv1617182,nssv1617238,nssv1617229,nssv1617176,nssv1617236,nssv1617198,nssv1617219,nssv1617177,nssv1617232,nssv1617201,nssv1617207,nssv1617190,nssv1617211,nssv1617178,nssv1617225,nssv1617192,nssv1617200,nssv1617197,nssv1617188,nssv1617234,nssv1617231,nssv1617204,nssv1617239,nssv1617186,nssv1617181,nssv1617183,nssv1617194,nssv1617195,nssv1617199,nssv1617228,nssv1617212,nssv1617187,nssv1617223,nssv1617184,nssv1617216,nssv1617230,nssv1617215,nssv1617210,nssv1617226,nssv1617227,nssv1617185 M 270 0 58 "" NA06991,NA06993,NA07034,NA07048,NA07055,NA07357,NA10835,NA10859,NA10860,NA10861,NA10863,NA11882,NA11992,NA11995,NA12003,NA12145,NA12155,NA12249,NA12264,NA12763,NA12801,NA12802,NA12812,NA12813,NA12814,NA12875,NA18506,NA18507,NA18515,NA18516,NA18517,NA18522,NA18852,NA18854,NA18855,NA18857,NA18861,NA18863,NA18913,NA18914,NA19101,NA19103,NA19116,NA19120,NA19137,NA19140,NA19141,NA19142,NA19143,NA19145,NA19200,NA19201,NA19202,NA19206,NA19208,NA19209,NA19239,NA19240 nsv514003 1 111180072 111189720 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2847170,nssv2847229,nssv2847240,nssv2847260,nssv2847262,nssv2847166,nssv2847220,nssv2847197,nssv2847267,nssv2847233,nssv2847239,nssv2847244,nssv2847172,nssv2847230,nssv2847238,nssv2847221,nssv2847247,nssv2847165,nssv2847226,nssv2847245,nssv2847210,nssv2847192,nssv2847207,nssv2847251,nssv2847173,nssv2847218,nssv2847187,nssv2847246,nssv2847196,nssv2847205,nssv2847184,nssv2847178,nssv2847269,nssv2847206,nssv2847227,nssv2847264,nssv2847174,nssv2847261,nssv2847224,nssv2847214,nssv2847250,nssv2847171,nssv2847191,nssv2847222,nssv2847163,nssv2847234,nssv2847183,nssv2847275,nssv2847259,nssv2847200,nssv2847253,nssv2847179,nssv2847190,nssv2847169,nssv2847175,nssv2847188,nssv2847202,nssv2847213,nssv2847249,nssv2847257,nssv2847248,nssv2847256,nssv2847265,nssv2847177,nssv2847263,nssv2847254,nssv2847232,nssv2847272,nssv2847266,nssv2847231,nssv2847189,nssv2847168,nssv2847193,nssv2847242,nssv2847201,nssv2847216,nssv2847228,nssv2847270,nssv2847204,nssv2847176,nssv2847180,nssv2847219,nssv2847164,nssv2847212,nssv2847194,nssv2847274,nssv2847225,nssv2847182,nssv2847237,nssv2847258,nssv2847199,nssv2847273,nssv2847241,nssv2847271,nssv2847195,nssv2847211,nssv2847255,nssv2847236,nssv2847243,nssv2847186,nssv2847252,nssv2847167,nssv2847185,nssv2847235,nssv2847203,nssv2847217,nssv2847181,nssv2847223,nssv2847209,nssv2847215,nssv2847198,nssv2847208,nssv2847268 M 2366 0 113 "" NA06986,NA06991,NA06993,NA07034,NA07048,NA07055,NA07347,NA07357,NA10835,NA10843,NA10859,NA10860,NA10863,NA11882,NA11920,NA11992,NA11995,NA12145,NA12155,NA12249,NA12264,NA12335,NA12340,NA12343,NA12348,NA12763,NA12767,NA12775,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12875,NA18484,NA18485,NA18488,NA18489,NA18506,NA18507,NA18516,NA18517,NA18522,NA18852,NA18854,NA18855,NA18857,NA18861,NA18863,NA18867,NA18868,NA18869,NA18873,NA18874,NA18875,NA18907,NA18909,NA18911,NA18916,NA18924,NA18930,NA19101,NA19103,NA19107,NA19109,NA19116,NA19117,NA19118,NA19120,NA19137,NA19140,NA19141,NA19142,NA19143,NA19145,NA19146,NA19148,NA19150,NA19151,NA19174,NA19178,NA19179,NA19180,NA19182,NA19183,NA19190,NA19191,NA19197,NA19199,NA19200,NA19201,NA19202,NA19206,NA19208,NA19209,NA19224,NA19225,NA19236,NA19239,NA19240,NA19252,NA21303,NA21390,NA21391,NA21512,NA21513,NA21526,NA21581,NA21608,NA21614,NA21615,NA21686 esv29589 1 111180085 111190659 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15129 M 40 0 10 "" NA07045,NA11995,NA18517,NA18861,NA18907,NA18909,NA18916,NA19190,NA19225,NA19240 nsv437948 1 111180501 111184586 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv467964,nssv467908,nssv467952,nssv467986,nssv467886,nssv467975,nssv467919,nssv467941,nssv467930,nssv467897 M 269 0 10 "" NA10835,NA10859,NA10860,NA11882,NA11992,NA12249,NA12264,NA12801,NA12812,NA12814 dgv29n27 1 111180501 111189246 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463184,nsv463139,nsv463195,nsv463150,nsv463173,nsv463217,nsv463228,nsv463161,nsv463206 M 1557 0 9 "" 1780854545_A,1780862075_A,1780862111_A,1798860552_A,HGDP00467,HGDP00640,HGDP00647,HGDP00869,HGDP01268 nsv818345 1 111180501 111189246 CNV gain+loss Wang_et_al_2007 17921354 SNP array nssv1415608,nssv1416022,nssv1416903,nssv1415734,nssv1416822,nssv1417964,nssv1418403,nssv1417814,nssv1416821,nssv1417962,nssv1417816,nssv1416023,nssv1415733,nssv1418392,nssv1416624,nssv1415609,nssv1416625,nssv1418381,nssv1416021,nssv1417770,nssv1417963,nssv1416671 M 112 3 19 "" NA06991,NA06993,NA07345,NA07348,NA07357,NA10835,NA12249,NA12801,NA12812,NA12813,NA12874,NA12875,NA18852,NA18854,NA19116,NA19120,NA19137,NA19140,NA19141,NA19142,NA19239,NA19240 dgv504n54 1 111180501 111191315 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547514,nsv547513,nsv547512,nsv547515,nsv547516,nsv547518,nsv547517,nsv547511,nsv547510 M 17421 0 111 "" 1780854545_A,1780862075_A,1780862111_A,1798860552_A,HGDP00467,HGDP00605,HGDP00640,HGDP00647,HGDP00869,HGDP01268 nsv547519 1 111180501 111195145 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722387 M 17421 0 1 "" dgv281n100 1 111183990 111196633 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010754,nsv1013794,nsv1006092 M 29084 0 3 "" dgv505n54 1 111187872 111189187 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547520,nsv547521,nsv547523,nsv547522,nsv547526 M 17421 0 15 "" dgv506n54 1 111187992 111189621 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547528,nsv547524,nsv547527,nsv547525,nsv547529 M 17421 0 15 "" dgv507n54 1 111188114 111191315 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547532,nsv547530 M 17421 0 2 "" dgv508n54 1 111188400 111189621 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547533,nsv547531 M 17421 0 8 "" nsv946138 1 111191405 111192863 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1780934,nssv1780968,nssv1780993,nssv1780973,nssv1780922,nssv1780962,nssv1780988,nssv1780947,nssv1780915,nssv1780960,nssv1780991,nssv1780965,nssv1780928,nssv1780936,nssv1780986,nssv1780952,nssv1780930,nssv1781002,nssv1780931,nssv1780946,nssv1780921,nssv1781005,nssv1780916,nssv1780967,nssv1780924,nssv1780945,nssv1780929,nssv1780972,nssv1780923,nssv1780979,nssv1780925,nssv1780978,nssv1780914,nssv1780954,nssv1780911,nssv1780932,nssv1780994,nssv1780949,nssv1780933,nssv1781001,nssv1780937,nssv1780980,nssv1780913,nssv1780971,nssv1780917,nssv1780950,nssv1780938,nssv1780935,nssv1780910,nssv1780961,nssv1780995,nssv1781003,nssv1780918,nssv1780951,nssv1780990,nssv1780939,nssv1780992,nssv1780909,nssv1780920,nssv1780984,nssv1780912,nssv1780956,nssv1780940,nssv1780943,nssv1780919,nssv1780963,nssv1780926,nssv1780985,nssv1780987,nssv1780983,nssv1780927,nssv1780944,nssv1780989,nssv1780998,nssv1780948,nssv1780977,nssv1780964,nssv1780942,nssv1780997,nssv1780941,nssv1781000,nssv1780974,nssv1780976,nssv1780955,nssv1780958,nssv1780996,nssv1780970,nssv1780953,nssv1780966,nssv1780969,nssv1780957,nssv1780982,nssv1781004,nssv1780959,nssv1780999,nssv1780975,nssv1780981 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3894023 1 111217364 111224339 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797207 M 3017 0 1 CD53 nsv522939 1 111222950 111227572 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698602 M 2026 0 1 CD53 nsv2398 1 111247554 111281753 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4509 M 9 1 0 "" NA12878 nsv463239 1 111260817 111286730 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539262 M 1557 0 1 "" HGDP00003 nsv547534 1 111260817 111286730 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173115 M 17421 0 1 "" HGDP00003 nsv523488 1 111267576 111268125 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699255 M 2026 0 1 "" nsv528444 1 111277276 111277364 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705039 M 2026 0 1 "" nsv508493 1 111396487 111445132 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617520 M 4 0 1 "" CHM nsv10639 1 111470372 111588576 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16756 M 31 1 0 CEPT1,CHI3L2,DENND2D,DRAM2 NA18552 esv2455976 1 111498703 111500178 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5393215 M 1 0 1 CEPT1 NA18507 nsv1003363 1 111538894 111566498 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701534 M 29084 0 1 DENND2D nsv463250 1 111539439 111863735 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539273 M 1557 0 1 ADORA3,ATP5F1,C1orf162,CHI3L2,CHIA,CHIAP2,DENND2D,OVGP1,PGCP1,PIFO,WDR77 HGDP01268 nsv547535 1 111539439 111863735 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173116 M 17421 0 1 ADORA3,ATP5F1,C1orf162,CHI3L2,CHIA,CHIAP2,DENND2D,OVGP1,PGCP1,PIFO,WDR77 HGDP01268 esv2758959 1 111588918 111596256 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756856 M 270 0 1 "" NA18573 esv2758960 1 111625374 111636507 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756857 M 270 0 3 CHIA,CHIAP2 NA18540,NA18550,NA18952 nsv1005303 1 111626234 111658799 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490511 M 29084 1 0 CHIA,CHIAP2 nsv547536 1 111628132 111661435 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722429,nssv722428 M 17421 1 1 CHIA,CHIAP2 nsv441709 1 111629849 111637017 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656737,nssv1656739,nssv1656738 M 270 0 3 CHIA,CHIAP2 NA18540,NA18550,NA18952 nsv818356 1 111631018 111633814 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417423,nssv1417174 M 112 0 2 "" NA18550,NA18952 esv1564747 1 111639792 111639854 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3984685 M 2 0 1 CHIA HuRef nsv518232 1 111648326 111685536 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695661 M 2026 0 1 CHIA nsv547537 1 111648326 111685536 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722430 M 17421 0 1 CHIA nsv525163 1 111676725 111677051 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701237 M 2026 0 1 "" nsv523975 1 111676725 111686983 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699830 M 2026 0 1 "" esv3329686 1 111697582 111697699 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652036 M 185 1 0 "" NA19240 nsv512745 1 111697590 111697702 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625372 M 1 1 0 "" 1 nsv547538 1 111704827 111711482 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722431 M 17421 0 1 "" nsv508504 1 111709563 111753213 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618983 M 4 0 1 PGCP1 NA10860 nsv946139 1 111722689 111725808 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781955,nssv1781965,nssv1782014,nssv1782000,nssv1781015,nssv1782004,nssv1781018,nssv1781989,nssv1781959,nssv1781999,nssv1782009,nssv1782018,nssv1781013,nssv1782024,nssv1781958,nssv1782006,nssv1782012,nssv1781994,nssv1781025,nssv1781980,nssv1782008,nssv1781978,nssv1781027,nssv1781956,nssv1781021,nssv1781979,nssv1781026,nssv1781977,nssv1781020,nssv1781971,nssv1781022,nssv1781962,nssv1781952,nssv1781993,nssv1781019,nssv1781981,nssv1781961,nssv1782017,nssv1781011,nssv1781968,nssv1781010,nssv1781986,nssv1781014,nssv1781963,nssv1781954,nssv1781991,nssv1782016,nssv1782025,nssv1781007,nssv1782005,nssv1781012,nssv1781985,nssv1781016,nssv1782021,nssv1782015,nssv1781983,nssv1782013,nssv1782026,nssv1781023,nssv1781984,nssv1781009,nssv1782003,nssv1782007,nssv1782002,nssv1782010,nssv1781996,nssv1781024,nssv1781976,nssv1781008,nssv1781974,nssv1782011,nssv1781964,nssv1781017,nssv1781973,nssv1782019,nssv1781988,nssv1781997,nssv1781995,nssv1781957,nssv1781966,nssv1781998,nssv1782022,nssv1781972,nssv1782020,nssv1781953,nssv1781006,nssv1781982,nssv1782001,nssv1781992,nssv1781970,nssv1781969,nssv1781975,nssv1781990,nssv1781967,nssv1782023,nssv1781960,nssv1781987 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv523120 1 111728687 111735827 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698820 M 2026 0 1 PGCP1 dgv509n54 1 111728966 111737905 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547539,nsv547545 M 17421 0 2 PGCP1 esv24395 1 111730544 111736420 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12562 M 40 0 2 PGCP1 NA07037,NA11993 nsv441710 1 111730660 111734750 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656744,nssv1656745,nssv1656742,nssv1656740,nssv1656741,nssv1656743 M 270 0 6 PGCP1 NA10860,NA11840,NA11993,NA12707,NA12717,NA12762 dgv510n54 1 111730818 111736340 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547541,nsv547540,nsv547542,nsv547543,nsv547544 M 17421 0 27 PGCP1 dgv511n54 1 111732439 111735211 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547552,nsv547547,nsv547546 M 17421 0 3 PGCP1 nsv516329 1 111732439 111735827 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv671993,nssv681590,nssv656465,nssv652776,nssv693306,nssv677602,nssv668712,nssv659651,nssv687080,nssv674042,nssv683722,nssv664466,nssv653712,nssv663615 M 2026 0 14 PGCP1 nsv818367 1 111732439 111735827 CNV loss Wang_et_al_2007 17921354 SNP array nssv1415804,nssv1415805 M 112 0 2 PGCP1 NA10860,NA11993 dgv512n54 1 111732439 111736340 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547553,nsv547554,nsv547551,nsv547550,nsv547549,nsv547548 M 17421 0 8 PGCP1 nsv517961 1 111735827 111737905 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695374 M 2026 0 1 "" nsv824131 1 111758542 111765835 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431834 M 31 0 1 OVGP1 AK20 esv2100138 1 111758873 111759308 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4868458 M 1 0 1 OVGP1 NA18507 nsv819848 1 111777127 111784755 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419837 M 2 0 1 WDR77 AK1 esv3451263 1 111802783 111802802 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596046 M 185 1 0 ATP5F1 NA19141 nsv946140 1 111803641 111805668 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782052,nssv1782060,nssv1782040,nssv1782078,nssv1782030,nssv1782102,nssv1782031,nssv1782084,nssv1782055,nssv1782098,nssv1782111,nssv1782090,nssv1782112,nssv1782086,nssv1782105,nssv1782071,nssv1782046,nssv1782061,nssv1782029,nssv1782119,nssv1782104,nssv1782067,nssv1782047,nssv1782057,nssv1782058,nssv1782115,nssv1782113,nssv1782072,nssv1782036,nssv1782080,nssv1782051,nssv1782073,nssv1782048,nssv1782085,nssv1782032,nssv1782076,nssv1782039,nssv1782120,nssv1782043,nssv1782114,nssv1782035,nssv1782121,nssv1782034,nssv1782116,nssv1782038,nssv1782059,nssv1782107,nssv1782083,nssv1782042,nssv1782100,nssv1782109,nssv1782122,nssv1782041,nssv1782077,nssv1782049,nssv1782094,nssv1782110,nssv1782081,nssv1782056,nssv1782082,nssv1782037,nssv1782095,nssv1782044,nssv1782117,nssv1782033,nssv1782068,nssv1782028,nssv1782089,nssv1782045,nssv1782097,nssv1782106,nssv1782062,nssv1782108,nssv1782101,nssv1782079,nssv1782065,nssv1782053,nssv1782064,nssv1782063,nssv1782091,nssv1782027,nssv1782054,nssv1782123,nssv1782087,nssv1782118,nssv1782075,nssv1782096,nssv1782074,nssv1782092,nssv1782069,nssv1782070,nssv1782050,nssv1782088,nssv1782093,nssv1782066,nssv1782099,nssv1782103 M 97 10 0 ATP5F1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3304017 1 111809337 111809338 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7752656 M 185 0 0 "" esv3322678 1 111809339 111809361 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901008,essv8901009,essv8901011,essv8901010 M 185 4 0 "" NA18505,NA18511,NA18870,NA18916 nsv2410 1 111831073 111854395 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9568 M 9 1 0 ADORA3 NA18507 esv3305815 1 111833800 111833801 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7742620,essv7749897,essv7745819,essv7742367,essv7756093,essv7752979,essv7756016,essv7743819,essv7761244,essv7748209,essv7758789,essv7757424,essv7751581,essv7745673,essv7754721,essv7753216,essv7756563,essv7749377,essv7741346,essv7748017,essv7756364,essv7743787,essv7750844,essv7757954,essv7747007,essv7757822,essv7752096,essv7748579,essv7747763,essv7762567,essv7751163,essv7753344 M 185 32 0 ADORA3 NA07051,NA18505,NA18511,NA18516,NA18519,NA18532,NA18537,NA18555,NA18558,NA18561,NA18562,NA18563,NA18592,NA18603,NA18608,NA18609,NA18638,NA18861,NA18870,NA18871,NA18912,NA18940,NA18943,NA18945,NA18947,NA18948,NA18965,NA19099,NA19102,NA19114,NA19129,NA19225 esv3323849 1 111833805 111833815 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901021,essv8901030,essv8901038,essv8901043,essv8901024,essv8901044,essv8901042,essv8901031,essv8901045,essv8901029,essv8901032,essv8901018,essv8901028,essv8901040,essv8901020,essv8901017,essv8901027,essv8901041,essv8901013,essv8901023,essv8901022,essv8901035,essv8901014,essv8901036,essv8901034,essv8901016,essv8901046,essv8901033,essv8901019,essv8901039,essv8901025,essv8901012 M 185 32 0 ADORA3 NA07051,NA18505,NA18511,NA18516,NA18519,NA18532,NA18537,NA18555,NA18558,NA18561,NA18562,NA18563,NA18592,NA18603,NA18608,NA18609,NA18638,NA18861,NA18870,NA18871,NA18912,NA18940,NA18943,NA18945,NA18947,NA18948,NA18965,NA19099,NA19102,NA19114,NA19129,NA19225 esv1401225 1 111846318 111846318 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3920283 M 2 1 0 ADORA3 HuRef nsv2421 1 111865297 111911432 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6829 M 9 0 1 ADORA3 NA12156 nsv947443 1 111878649 111882304 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762606 M 97 1 0 ADORA3 HGDP00998 esv1773706 1 111889089 111889259 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4130878 M 2 0 1 ADORA3 HuRef esv3367301 1 111925189 111925208 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596068,essv9596079,essv9596057 M 185 3 0 "" NA11881,NA11931,NA12812 nsv477489 1 111931560 111931560 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016556 M 9 1 0 "" NA18517 nsv947444 1 111950493 111971008 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765917 M 97 1 0 LOC100129269,RAP1A HGDP00998 esv3305407 1 111983547 111983548 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7754188,essv7749062,essv7746687,essv7757105,essv7749043,essv7745008,essv7760354,essv7754948,essv7758633,essv7751988,essv7746534 M 185 11 0 RAP1A NA11830,NA12003,NA12716,NA18523,NA18552,NA18858,NA18909,NA18952,NA18973,NA19116,NA19138 esv3421509 1 111983549 111983571 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901052,essv8901053,essv8901054,essv8901055,essv8901050,essv8901049,essv8901047,essv8901057,essv8901051,essv8901056,essv8901058 M 185 11 0 RAP1A NA11830,NA12003,NA12716,NA18523,NA18552,NA18858,NA18909,NA18952,NA18973,NA19116,NA19138 nsv946141 1 111992106 111993879 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782149,nssv1782163,nssv1782138,nssv1782124,nssv1782201,nssv1782219,nssv1782128,nssv1782195,nssv1782152,nssv1782197,nssv1782129,nssv1782175,nssv1782143,nssv1782168,nssv1782133,nssv1782190,nssv1782134,nssv1782198,nssv1782202,nssv1782161,nssv1782137,nssv1782178,nssv1782203,nssv1782154,nssv1782146,nssv1782184,nssv1782144,nssv1782193,nssv1782140,nssv1782165,nssv1782135,nssv1782189,nssv1782126,nssv1782185,nssv1782209,nssv1782158,nssv1782145,nssv1782217,nssv1782148,nssv1782187,nssv1782132,nssv1782214,nssv1782131,nssv1782174,nssv1782205,nssv1782172,nssv1782208,nssv1782213,nssv1782155,nssv1782220,nssv1782139,nssv1782169,nssv1782210,nssv1782188,nssv1782204,nssv1782215,nssv1782207,nssv1782182,nssv1782136,nssv1782170,nssv1782130,nssv1782194,nssv1782141,nssv1782196,nssv1782153,nssv1782166,nssv1782125,nssv1782191,nssv1782142,nssv1782176,nssv1782127,nssv1782150,nssv1782206,nssv1782211,nssv1782179,nssv1782159,nssv1782181,nssv1782156,nssv1782200,nssv1782216,nssv1782160,nssv1782164,nssv1782192,nssv1782218,nssv1782212,nssv1782177,nssv1782199,nssv1782162,nssv1782167,nssv1782186,nssv1782151,nssv1782180,nssv1782157,nssv1782147,nssv1782183,nssv1782173,nssv1782171 M 97 10 0 RAP1A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3394544 1 112043088 112043130 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863742 M 185 1 0 RAP1A NA12005 nsv2432 1 112133265 112158240 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1338 M 9 1 0 KCND3 NA19240 esv3894034 1 112145890 112158624 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780886 M 3017 0 1 KCND3 esv1002713 1 112221852 112229970 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563940 M 3 0 1 KCND3 HuRef nsv463261 1 112235189 112253548 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539284 M 1557 0 1 KCND3 HGDP00094 nsv547555 1 112235189 112253548 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173117 M 17421 0 1 KCND3 HGDP00094 nsv831048 1 112261220 112481802 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448717 M 95 1 0 KCND3,LOC643355 nsv528707 1 112263160 112264964 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705354 M 2026 0 1 KCND3 nsv547556 1 112324618 112358299 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173118 M 17421 0 1 KCND3,LOC643355 HGDP00814 nsv463272 1 112324618 112358420 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539295 M 1557 0 1 KCND3,LOC643355 HGDP00814 nsv824143 1 112332637 112337682 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433435 M 31 1 0 KCND3,LOC643355 NA18526 nsv471960 1 112365413 112365413 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015942 M 9 1 0 "" NA18555 nsv831059 1 112370585 112526248 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448728 M 95 1 0 "" nsv831070 1 112396181 112594062 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448751,nssv1448762,nssv1448740 M 95 3 0 "" nsv1000467 1 112443178 112461357 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500517 M 29084 0 1 "" dgv282n100 1 112457118 112507651 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999096,nsv1007879,nsv999604 M 29084 3 0 "" nsv508515 1 112459063 112534404 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618984,nssv620141 M 4 0 2 "" NA10860,NA15510 dgv283n100 1 112475957 112498901 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003464,nsv998141,nsv1008076 M 29084 9 0 "" dgv284n100 1 112480083 112507729 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003757,nsv1005371,nsv998131 M 29084 3 0 "" dgv285n100 1 112481857 112498901 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013717,nsv1008794,nsv1001293 M 29084 0 4 "" nsv2443 1 112487442 112516321 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10201,nssv10981 M 9 0 2 "" NA15510,NA18956 nsv1013933 1 112487872 112498724 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496128 M 29084 0 1 "" nsv1007265 1 112487872 112498901 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3701536 M 29084 1 0 "" dgv513n54 1 112487872 112505463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547560,nsv547557 M 17421 0 2 "" esv2760084 1 112487872 112507741 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006164,essv7006171,essv7006176,essv7006175,essv7006147,essv7006153,essv7006157,essv7006150,essv7006154,essv7006149,essv7006170,essv7006165,essv7006172,essv7006162,essv7006160,essv7006161,essv7006174,essv7006178,essv7006151,essv7006146,essv7006168,essv7006173,essv7006163,essv7006158,essv7006148,essv7006167,essv7006156,essv7006159,essv7006152,essv7006169 M 1109 0 30 "" RW_0046,RW_0090,RW_0091,RW_0098,RW_0104,RW_0116,RW_0138,RW_0164,RW_0169,RW_0232,RW_0234,RW_0237,RW_0266,RW_0288,RW_0300,RW_0309,RW_0316,RW_0321,RW_0328,RW_0349,RW_0504,RW_0513,RW_0519,RW_0550,RW_0583,RW_0585,RW_0586,RW_0614,RW_0618,RW_0643 dgv514n54 1 112488882 112498789 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547559,nsv547558 M 17421 0 3 "" nsv435900 1 112490979 112506339 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466228 M 2 0 1 "" NA15510 nsv947445 1 112491477 112509083 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762717,nssv2762213,nssv2760417,nssv2764329 M 97 0 4 "" HGDP00542,HGDP00665,HGDP00778,HGDP01307 nsv287 1 112491625 112512823 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv287 M 1 0 1 "" NA15510 dgv286n100 1 112491722 112507729 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010158,nsv1010584 M 29084 2 0 "" dgv8n17 1 112492066 112509389 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv436980,nsv436991 M 60 0 2 "" NA07019,NA12707 esv4533 1 112493274 112506348 CNV loss Wang_et_al_2008 18987735 Sequencing essv26974 M 1 0 1 "" YH nsv498684 1 112493313 112506229 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585397 M 9 0 1 "" esv1001556 1 112493315 112507895 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564985 M 3 0 1 "" HuRef nsv820716 1 112493555 112506369 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420547 M 1 0 1 "" NA10851 nsv819350 1 112493657 112506352 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418636 M 2 0 1 "" AK1 esv27061 1 112494152 113047786 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13370,esv17606,esv13773 M 40 26 3 CAPZA1,CTTNBP2NL,MIR4256,MOV10,RHOC,ST7L,WNT2B NA12004,NA12044,NA12239,NA12414,NA12489,NA12776,NA12828,NA12878,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv824154 1 112494671 112505908 CNV gain+loss Park_et_al_2010 20364138 Oligo aCGH nssv1431092,nssv1429577,nssv1427277,nssv1423971,nssv1428838,nssv1433436,nssv1424759,nssv1433074,nssv1426406 M 31 3 6 "" AK12,AK14,AK18,AK2,AK6,AK8,NA18526,NA18582,NA18592 dgv67n67 1 112494671 112506218 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824165,nsv824187,nsv824198,nsv824176,nsv824209 M 31 11 0 "" AK16,AK4,NA18547,NA18564,NA18570,NA18947,NA18949,NA18951,NA18968,NA18973,NA18997 nsv10650 1 112494896 112506441 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16743,nssv17424,nssv18077,nssv17420,nssv17732,nssv16746,nssv16768,nssv19101,nssv16087,nssv18762,nssv19428,nssv16089,nssv16107,nssv21764,nssv20429,nssv20430,nssv16091,nssv19093,nssv17761,nssv15115 M 31 20 0 "" NA07029,NA07048,NA10863,NA11830,NA12740,NA12872,NA18502,NA18504,NA18517,NA18563,NA18564,NA18853,NA18860,NA18975,NA18980,NA19132,NA19144,NA19173,NA19221,NA19240 nsv547561 1 112495220 112498229 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722479,nssv722478,nssv722477 M 17421 0 3 "" nsv547562 1 112495220 112498789 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722482,nssv722481,nssv722480,nssv722484,nssv722485,nssv722483 M 17421 1 5 "" nsv547564 1 112495220 112506067 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722495,nssv722494,nssv722493,nssv722491,nssv722487,nssv722490,nssv722492,nssv722488,nssv722489,nssv722636,nssv722503,nssv722496,nssv722502,nssv722499,nssv722498,nssv722497,nssv722517,nssv722501,nssv722500,nssv722505,nssv722504,nssv722510,nssv722509,nssv722506,nssv722508,nssv722507,nssv722531,nssv722516,nssv722515,nssv722514,nssv722511,nssv722513,nssv722512,nssv722530,nssv722519,nssv722518,nssv722522,nssv722523,nssv722520,nssv722521,nssv722526,nssv722524,nssv722529,nssv722525,nssv722568,nssv722528,nssv722527,nssv722533,nssv722539,nssv722532,nssv722536,nssv722538,nssv722535,nssv722534,nssv722537,nssv722543,nssv722548,nssv722542,nssv722541,nssv722540,nssv722549,nssv722547,nssv722544,nssv722546,nssv722545,nssv722637,nssv722552,nssv722553,nssv722551,nssv722550,nssv722561,nssv722554,nssv722557,nssv722555,nssv722556,nssv722560,nssv722558,nssv722559,nssv722567,nssv722565,nssv722563,nssv722562,nssv722564,nssv722566,nssv722572,nssv722571,nssv722569,nssv722570,nssv722578,nssv722599,nssv722577,nssv722583,nssv722582,nssv722574,nssv722575,nssv722573,nssv722576,nssv722579,nssv722581,nssv722580,nssv722598,nssv722585,nssv722584,nssv722591,nssv722587,nssv722586,nssv722589,nssv722588,nssv722590,nssv722596,nssv722593,nssv722597,nssv722592,nssv722595,nssv722594,nssv722634,nssv722604,nssv722600,nssv722605,nssv722601,nssv722602,nssv722603,nssv722619,nssv722610,nssv722607,nssv722608,nssv722609,nssv722606,nssv722611,nssv722618,nssv722616,nssv722612,nssv722617,nssv722615,nssv722613,nssv722614,nssv722635,nssv722628,nssv722621,nssv722622,nssv722620,nssv722627,nssv722623,nssv722624,nssv722633,nssv722626,nssv722625,nssv722629,nssv722631,nssv722632,nssv722630,nssv722650,nssv722639,nssv722638,nssv722640,nssv722641,nssv722642,nssv722644,nssv722643,nssv722649,nssv722672,nssv722646,nssv722648,nssv722645,nssv722647,nssv722663,nssv722651,nssv722656,nssv722653,nssv722652,nssv722655,nssv722654,nssv722658,nssv722657,nssv722662,nssv722661,nssv722660,nssv722659,nssv722665,nssv722670,nssv722669,nssv722664,nssv722671,nssv722668,nssv722666,nssv722667,nssv722675,nssv722674,nssv722673,nssv722679,nssv722678,nssv722677,nssv722682,nssv722676,nssv722681,nssv722680,nssv722690,nssv722683,nssv722685,nssv722684,nssv722688,nssv722689,nssv722687,nssv722686,nssv722693,nssv722692,nssv722691,nssv722697,nssv722696,nssv722695,nssv722694 M 17421 1 210 "" dgv515n54 1 112495220 112506583 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547565,nsv547563 M 17421 0 2 "" esv2421462 1 112496243 112498913 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5096338,essv5038011,essv5091785,essv5142978,essv5068355,essv5053061,essv5042301,essv5057698,essv5125517,essv5134002,essv5145640,essv5031414,essv5042004,essv5086035,essv5138101,essv5029425,essv5106646,essv5019748,essv5009151,essv5013965,essv5110373,essv5046676,essv5100819,essv5045779,essv5018699,essv5031533,essv5085721,essv5108262,essv5079122,essv5151634,essv5002600,essv5048242,essv5074726,essv5067885,essv5103333,essv5136770,essv5137571,essv5140439,essv5107076,essv5018601,essv5076310,essv5105223,essv5002346,essv5028837,essv5062247,essv5004366,essv5118093,essv5092686,essv5125920,essv5088945,essv5058342,essv5023189,essv5156636,essv5065874,essv5012909,essv5044602,essv5159252,essv5048740,essv5146081,essv5016067,essv5157339,essv5147727,essv5103983,essv5086176,essv5028629,essv5105667,essv5126833,essv5021625,essv5015400,essv5146130,essv5090493,essv5002281,essv5017821,essv5138737,essv5137716,essv5035226,essv5022054,essv5113247,essv5078523,essv5024890,essv5011592,essv5130883,essv5069171,essv5067803,essv5082386,essv5131215,essv5060155,essv5101676,essv5083441,essv5088475,essv5052021,essv5109961,essv5010431,essv5080880,essv5105981,essv5002128,essv5013513,essv5056113,essv5145318,essv5123588,essv5098630,essv5099478,essv5035492,essv5113308,essv5155090,essv5104780,essv5147848,essv5064600,essv5081860,essv5086714,essv5088979,essv5029498,essv5069761,essv5013131,essv5127336,essv5055562,essv5052064,essv5116619,essv5128507,essv5069374,essv5130161,essv5115768,essv5049507,essv5117530,essv5068470,essv5036977,essv5155112,essv5010635,essv5123672,essv5122628,essv5072058,essv5079705,essv5158584,essv5125172,essv5083632,essv5056580,essv5098988,essv5101616,essv5012027,essv5095904,essv5009699,essv5021587,essv5062150,essv5103285,essv5068261,essv5126101,essv5152659,essv5086206,essv5024067,essv5077043,essv5011460,essv5018420,essv5077014,essv5127032,essv5112311,essv5036515,essv5025701,essv5020664,essv5050431,essv5040319,essv5032731,essv5018570,essv5112512,essv5032882,essv5069973,essv5142017,essv5099343,essv5138654,essv5077461,essv5012840,essv5107142,essv5057440,essv5045709,essv5048147,essv5091009,essv5103404,essv5074886,essv5055789,essv5081696,essv5123401,essv5136893,essv5080377,essv5075458,essv5122398,essv5111622,essv5079183,essv5106482,essv5121264,essv5108360,essv5129481,essv5149277,essv5141267,essv5002395,essv5098629,essv5048271,essv5050611,essv5104086,essv5133373,essv5156463,essv5046950,essv5056907,essv5133496,essv5011287,essv5005336,essv5144302,essv5106090,essv5012733,essv5159020,essv5144933,essv5042994,essv5087472,essv5042286,essv5076297,essv5062216,essv5112603,essv5021516,essv5092857,essv5130455,essv5096072,essv5107298,essv5031664,essv5113545,essv5120440,essv5126488,essv5144594,essv5060005,essv5131420,essv5096409,essv5137413,essv5100526,essv5065442,essv5016552,essv5002583,essv5110712,essv5060275,essv5138991,essv5038211,essv5100488,essv5134515,essv5004221,essv5119171,essv5054355,essv5157800,essv5096027,essv5105886,essv5146694,essv5115263,essv5068224,essv5099459,essv5114888,essv5027663,essv5050987,essv5133981,essv5058923,essv5045370,essv5107067,essv5151940,essv5077474,essv5029513,essv5153798,essv5053251,essv5121076,essv5022274,essv5154164,essv5029358,essv5106193,essv5019333,essv5141778,essv5087295,essv5088089,essv5009439,essv5015895,essv5009567,essv5106699,essv5123516,essv5077330,essv5160825,essv5070765,essv5063616,essv5073900,essv5012769,essv5065268,essv5086534,essv5145937,essv5054803,essv5103796,essv5058668,essv5152536,essv5146978,essv5128188,essv5063054,essv5076146,essv5066908,essv5024657,essv5096416,essv5073458,essv5125500,essv5097741,essv5058197,essv5092617,essv5089602,essv5092516,essv5101844,essv5048766,essv5095400,essv5068550,essv5001960,essv5111399,essv5120891,essv5051499,essv5018417,essv5007257,essv5101039,essv5160090,essv5007280,essv5105332,essv5036750,essv5048305,essv5026828,essv5046328,essv5022593,essv5053649,essv5079384,essv5137594,essv5149707,essv5159531,essv5086372,essv5004624,essv5075297,essv5109391,essv5044477,essv5005086,essv5154838,essv5085875,essv5058258,essv5038788,essv5160513,essv5007465,essv5131726,essv5159377,essv5053208,essv5081609,essv5151022,essv5033388,essv5128870,essv5025791,essv5062104,essv5130908,essv5019946,essv5129877,essv5035408,essv5060268,essv5115995,essv5040527,essv5082558,essv5079859,essv5057578,essv5069615,essv5143741,essv5160273,essv5013957,essv5045505,essv5040044,essv5054184,essv5142886,essv5152602,essv5003163,essv5131844,essv5063162,essv5100444,essv5026022,essv5160063,essv5124023,essv5018522,essv5136962,essv5100379,essv5047231,essv5050428,essv5068028,essv5109331,essv5065467,essv5110124,essv5051142,essv5018978,essv5136966,essv5022700,essv5031969,essv5113625,essv5065384,essv5019779,essv5114706,essv5050453,essv5003648,essv5154039,essv5124604,essv5117483,essv5030023,essv5062702,essv5147365,essv5123235,essv5103987,essv5016183,essv5045289,essv5092674,essv5144762,essv5043621,essv5007069,essv5140083,essv5024575,essv5080921,essv5104849,essv5136518,essv5076269,essv5088832,essv5094165,essv5085327,essv5042115,essv5081645,essv5051126,essv5065083,essv5015358,essv5119542,essv5124780,essv5007879,essv5109417,essv5139346,essv5087260,essv5045173,essv5027607,essv5036698,essv5090209,essv5116386,essv5019913,essv5080134,essv5123989,essv5074504,essv5154790,essv5117728,essv5153113,essv5102193,essv5091752,essv5080791,essv5044000,essv5128646,essv5073645,essv5044492,essv5077448,essv5071229,essv5033801,essv5119896,essv5041263,essv5048716,essv5139976,essv5075465,essv5009180 M 1184 0 455 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06997,NA07014,NA07022,NA07031,NA07037,NA07045,NA07051,NA07055,NA07345,NA07348,NA07435,NA10831,NA10835,NA10837,NA10839,NA10840,NA10843,NA10845,NA10847,NA10853,NA10854,NA10861,NA10864,NA11829,NA11839,NA11840,NA11892,NA11893,NA11894,NA11917,NA11919,NA11930,NA11931,NA11992,NA11993,NA11994,NA11995,NA12005,NA12006,NA12043,NA12044,NA12056,NA12057,NA12146,NA12155,NA12156,NA12248,NA12249,NA12272,NA12273,NA12283,NA12287,NA12335,NA12336,NA12340,NA12341,NA12343,NA12347,NA12376,NA12383,NA12413,NA12546,NA12707,NA12708,NA12716,NA12739,NA12748,NA12749,NA12750,NA12752,NA12760,NA12761,NA12763,NA12767,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12815,NA12817,NA12828,NA12829,NA12830,NA12843,NA12864,NA12865,NA12873,NA12874,NA12889,NA17962,NA17965,NA17969,NA17970,NA17975,NA17976,NA17980,NA17981,NA17983,NA17986,NA17987,NA17988,NA17989,NA17993,NA17996,NA17997,NA17999,NA18102,NA18106,NA18107,NA18108,NA18109,NA18118,NA18120,NA18124,NA18125,NA18127,NA18129,NA18131,NA18133,NA18135,NA18136,NA18140,NA18143,NA18144,NA18148,NA18149,NA18152,NA18153,NA18154,NA18156,NA18157,NA18158,NA18159,NA18160,NA18162,NA18166,NA18497,NA18498,NA18526,NA18529,NA18532,NA18534,NA18536,NA18537,NA18542,NA18543,NA18544,NA18548,NA18550,NA18552,NA18558,NA18561,NA18566,NA18572,NA18573,NA18576,NA18577,NA18582,NA18593,NA18594,NA18595,NA18596,NA18599,NA18602,NA18608,NA18609,NA18610,NA18611,NA18612,NA18613,NA18616,NA18618,NA18622,NA18623,NA18624,NA18627,NA18630,NA18631,NA18632,NA18634,NA18635,NA18636,NA18638,NA18639,NA18641,NA18642,NA18670,NA18674,NA18685,NA18689,NA18694,NA18702,NA18704,NA18745,NA18747,NA18748,NA18939,NA18940,NA18942,NA18943,NA18944,NA18945,NA18946,NA18948,NA18953,NA18954,NA18956,NA18959,NA18961,NA18963,NA18969,NA18972,NA18976,NA18977,NA18978,NA18979,NA18981,NA18991,NA18993,NA18994,NA18995,NA18998,NA18999,NA19000,NA19007,NA19010,NA19054,NA19055,NA19056,NA19057,NA19058,NA19060,NA19062,NA19063,NA19064,NA19065,NA19066,NA19068,NA19070,NA19072,NA19074,NA19075,NA19076,NA19081,NA19084,NA19085,NA19086,NA19087,NA19088,NA19185,NA19327,NA19398,NA19429,NA19455,NA19456,NA19649,NA19650,NA19651,NA19652,NA19653,NA19654,NA19656,NA19658,NA19659,NA19663,NA19665,NA19675,NA19678,NA19680,NA19681,NA19682,NA19683,NA19684,NA19701,NA19702,NA19716,NA19718,NA19721,NA19722,NA19723,NA19724,NA19725,NA19746,NA19747,NA19748,NA19749,NA19755,NA19756,NA19757,NA19759,NA19760,NA19762,NA19763,NA19771,NA19772,NA19773,NA19774,NA19775,NA19777,NA19778,NA19780,NA19782,NA19783,NA19784,NA19788,NA19790,NA19794,NA19909,NA19919,NA19921,NA20129,NA20300,NA20317,NA20319,NA20334,NA20342,NA20356,NA20358,NA20502,NA20506,NA20508,NA20509,NA20512,NA20515,NA20519,NA20521,NA20522,NA20524,NA20525,NA20527,NA20528,NA20529,NA20530,NA20531,NA20534,NA20535,NA20538,NA20539,NA20540,NA20541,NA20581,NA20582,NA20752,NA20757,NA20758,NA20760,NA20765,NA20766,NA20768,NA20769,NA20772,NA20774,NA20778,NA20785,NA20786,NA20792,NA20796,NA20797,NA20799,NA20800,NA20801,NA20803,NA20805,NA20807,NA20809,NA20810,NA20826,NA20847,NA20849,NA20853,NA20854,NA20856,NA20859,NA20861,NA20862,NA20869,NA20870,NA20872,NA20874,NA20876,NA20877,NA20879,NA20881,NA20882,NA20883,NA20884,NA20885,NA20887,NA20888,NA20889,NA20890,NA20891,NA20892,NA20894,NA20896,NA20897,NA20898,NA20899,NA20900,NA20901,NA20902,NA20903,NA20904,NA20906,NA20907,NA20909,NA20910,NA21086,NA21090,NA21091,NA21092,NA21094,NA21097,NA21098,NA21099,NA21100,NA21101,NA21103,NA21104,NA21106,NA21107,NA21108,NA21109,NA21111,NA21112,NA21116,NA21117,NA21118,NA21137,NA21141,NA21144,NA21320,NA21339,NA21408,NA21421,NA21436,NA21441,NA21442,NA21457,NA21489,NA21490,NA21574,NA21575,NA21597,NA21600,NA21683,NA21733,NA21784 esv2758961 1 112496617 112512047 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756858 M 270 0 10 "" NA10851,NA12006,NA12802,NA12815,NA18572,NA18624,NA18972,NA18976,NA18978,NA18999 nsv514004 1 112496696 112498744 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2846949,nssv2847908,nssv2847022,nssv2846937,nssv2846994,nssv2847014,nssv2847279,nssv2847909,nssv2846965,nssv2846981,nssv2847282,nssv2847906,nssv2846975,nssv2847016,nssv2847901,nssv2847009,nssv2847020,nssv2846989,nssv2846985,nssv2846990,nssv2847023,nssv2846923,nssv2846925,nssv2846967,nssv2846961,nssv2846938,nssv2846984,nssv2846922,nssv2846934,nssv2846974,nssv2846971,nssv2846931,nssv2847895,nssv2846932,nssv2846987,nssv2846945,nssv2847900,nssv2847017,nssv2847902,nssv2846926,nssv2847021,nssv2846935,nssv2846924,nssv2846978,nssv2847896,nssv2847011,nssv2846999,nssv2847018,nssv2847013,nssv2846940,nssv2847289,nssv2846996,nssv2847904,nssv2846950,nssv2846953,nssv2846955,nssv2847907,nssv2847019,nssv2847911,nssv2847283,nssv2846956,nssv2847910,nssv2846977,nssv2846958,nssv2846963,nssv2846944,nssv2847893,nssv2846946,nssv2847903,nssv2846969,nssv2846988,nssv2846941,nssv2846972,nssv2846947,nssv2847004,nssv2846951,nssv2847281,nssv2846979,nssv2846959,nssv2847277,nssv2846957,nssv2847008,nssv2847003,nssv2847287,nssv2846997,nssv2846964,nssv2846952,nssv2847001,nssv2847897,nssv2847286,nssv2846929,nssv2847278,nssv2847005,nssv2846943,nssv2847894,nssv2846973,nssv2847899,nssv2847007,nssv2846928,nssv2847012,nssv2846986,nssv2847002,nssv2846998,nssv2846966,nssv2846936,nssv2846992,nssv2847276,nssv2846942,nssv2846927,nssv2846948,nssv2847290,nssv2847280,nssv2846982,nssv2846983,nssv2847288,nssv2847912,nssv2846993,nssv2846939,nssv2847006,nssv2846960,nssv2847285,nssv2847284,nssv2846933,nssv2846991,nssv2847000,nssv2847898,nssv2846962,nssv2847010,nssv2846976,nssv2846930,nssv2846995,nssv2847015,nssv2846954,nssv2847905,nssv2846980,nssv2846968,nssv2846970 M 2366 0 137 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA07014,NA07019,NA07022,NA07031,NA07051,NA07055,NA07348,NA07435,NA10831,NA10835,NA10837,NA10839,NA10840,NA10843,NA10845,NA10847,NA10851,NA10857,NA10860,NA10864,NA11829,NA11839,NA11840,NA11892,NA11893,NA11894,NA11917,NA11919,NA11930,NA11992,NA11993,NA12005,NA12043,NA12044,NA12056,NA12146,NA12155,NA12156,NA12248,NA12249,NA12272,NA12273,NA12274,NA12283,NA12287,NA12335,NA12336,NA12340,NA12343,NA12347,NA12376,NA12383,NA12485,NA12546,NA12708,NA12716,NA12748,NA12749,NA12750,NA12752,NA12760,NA12761,NA12763,NA12767,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12815,NA12817,NA12828,NA12829,NA12830,NA12843,NA12864,NA12873,NA12874,NA12889,NA18497,NA18498,NA18532,NA18537,NA18550,NA18552,NA18558,NA18566,NA18572,NA18573,NA18576,NA18577,NA18582,NA18593,NA18594,NA18608,NA18609,NA18611,NA18612,NA18622,NA18624,NA18632,NA18635,NA18636,NA18940,NA18942,NA18945,NA18948,NA18953,NA18956,NA18959,NA18961,NA18969,NA18972,NA18978,NA18981,NA18991,NA18994,NA18995,NA18998,NA18999,NA19000,NA19003,NA19007,NA19185,NA21307,NA21441,NA21442,NA21489,NA21490,NA21600,NA21601 esv3584595 1 112497197 112498913 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838356,essv9838390,essv9838401,essv9838367,essv9838434,essv9838345,essv9838445,essv9838423,essv9838412,essv9838379,essv9838456 M 34 0 11 "" 1WS,KSM003,KSM006,KSM008,OA016,OA018b,OA062,OA074,OA091,OA092,OA2A esv2760854 1 112497197 112507741 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6995155,essv6995033,essv6994689,essv6994700,essv6994423,essv6995100,essv6994567,essv6994978,essv6995478,essv6995400,essv6994722,essv6995489,essv6994922,essv6994911,essv6995245,essv6995389,essv6995267,essv6995278,essv6995111,essv6994600,essv6994944,essv6995423,essv6995055,essv6995190,essv6994800,essv6995367,essv6994622,essv6994989,essv6994745,essv6994833,essv6995201,essv6994811,essv6994489,essv6995345,essv6995500,essv6994667,essv6994645,essv6994456,essv6995356,essv6995022,essv6995212,essv6994733,essv6995234,essv6995133,essv6995000,essv6994867,essv6994467,essv6994534,essv6995289,essv6994445,essv6994434,essv6995511,essv6994511,essv6995301,essv6994933,essv6994656,essv6995312,essv6995445,essv6995066,essv6995011,essv6994523,essv6995177,essv6994611,essv6994889,essv6994822,essv6994678,essv6995223,essv6994844,essv6995467,essv6995166,essv6994711,essv6995412,essv6995323,essv6995089,essv6994778,essv6994856,essv6995334,essv6994478,essv6994756,essv6995434,essv6995078,essv6994500,essv6994767,essv6995122,essv6995144,essv6994967,essv6994955,essv6995044,essv6995523,essv6994545,essv6995456,essv6995256,essv6994878,essv6995378,essv6994900,essv6994589,essv6994634,essv6994578,essv6994556,essv6994789 M 1109 6 93 "" SW_0008,SW_0016,SW_0018,SW_0029,SW_0049,SW_0057,SW_0062,SW_0089,SW_0099,SW_0145,SW_0159,SW_0160,SW_0173,SW_0183,SW_0197,SW_0200,SW_0203,SW_0226,SW_0227,SW_0243,SW_0244,SW_0313,SW_0628,SW_0659,SW_0660,SW_0674,SW_0715,SW_0760,SW_0775,SW_0814,SW_0822,SW_0857,SW_0861,SW_0873,SW_1018,SW_1020,SW_1042,SW_1045,SW_1046,SW_1057,SW_1063,SW_1074,SW_1078,SW_1106,SW_1114,SW_1116,SW_1120,SW_1147,SW_1153,SW_1156,SW_1162,SW_1171,SW_1172,SW_1174,SW_1195,SW_1204,SW_1211,SW_1212,SW_1228,SW_1239,SW_1240,SW_1242,SW_1243,SW_1246,SW_1250,SW_1253,SW_1267,SW_1272,SW_1284,SW_1288,SW_1290,SW_1314,SW_1324,SW_1345,SW_1353,SW_1365,SW_1366,SW_1372,SW_1387,SW_1392,SW_1397,SW_1402,SW_1408,SW_1409,SW_1413,SW_1417,SW_1419,SW_1433,SW_1436,SW_1438,SW_1466,SW_1467,SW_1468,SW_1469,SW_1484,SW_1523,SW_1547,SW_1569,SW_1571 dgv287n100 1 112497197 112510584 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002867,nsv1008240,nsv1001517,nsv1007189,nsv1013835,nsv1000150,nsv1002901,nsv1007466,nsv1013761,nsv1011642 M 29084 0 20 "" dgv288n100 1 112497197 112510584 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014221,nsv998623,nsv1013539,nsv999074,nsv998008,nsv1003006,nsv1005503,nsv1014284,nsv1014148,nsv1014362,nsv1003725,nsv1006567,nsv997510 M 29084 259 187 "" dgv289n100 1 112497197 112510808 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011787,nsv1010840,nsv1000593 M 29084 3 0 "" nsv442981 1 112497200 112498913 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617286,nssv1617309,nssv1617250,nssv1617276,nssv1617301,nssv1617318,nssv1617245,nssv1617256,nssv1617312,nssv1617281,nssv1617264,nssv1617322,nssv1617347,nssv1617323,nssv1617298,nssv1617244,nssv1617340,nssv1617342,nssv1617274,nssv1617277,nssv1617271,nssv1617305,nssv1617341,nssv1617253,nssv1617331,nssv1617349,nssv1617293,nssv1617339,nssv1617315,nssv1617287,nssv1617292,nssv1617332,nssv1617314,nssv1617260,nssv1617334,nssv1617266,nssv1617326,nssv1617344,nssv1617258,nssv1617288,nssv1617299,nssv1617255,nssv1617259,nssv1617351,nssv1617290,nssv1617303,nssv1617330,nssv1617296,nssv1617297,nssv1617249,nssv1617282,nssv1617242,nssv1617294,nssv1617348,nssv1617251,nssv1617319,nssv1617300,nssv1617337,nssv1617307,nssv1617311,nssv1617325,nssv1617240,nssv1617289,nssv1617278,nssv1617275,nssv1617320,nssv1617336,nssv1617317,nssv1617283,nssv1617295,nssv1617343,nssv1617254,nssv1617285,nssv1617263,nssv1617269,nssv1617262,nssv1617252,nssv1617261,nssv1617316,nssv1617333,nssv1617310,nssv1617308,nssv1617247,nssv1617243,nssv1617327,nssv1617321,nssv1617273,nssv1617265,nssv1617270,nssv1617304,nssv1617272,nssv1617329,nssv1617350,nssv1617345,nssv1617267,nssv1617248,nssv1617306,nssv1617284,nssv1617328,nssv1617338,nssv1617241 M 270 0 101 "" NA06985,NA06991,NA07019,NA07022,NA07055,NA07345,NA07348,NA10831,NA10835,NA10839,NA10847,NA10851,NA10854,NA10857,NA10860,NA10861,NA11829,NA11839,NA11840,NA11992,NA11993,NA11994,NA11995,NA12005,NA12006,NA12043,NA12044,NA12056,NA12057,NA12146,NA12155,NA12156,NA12248,NA12249,NA12707,NA12716,NA12750,NA12752,NA12760,NA12761,NA12763,NA12801,NA12802,NA12812,NA12813,NA12815,NA12864,NA12865,NA12873,NA12874,NA18526,NA18529,NA18532,NA18537,NA18540,NA18542,NA18550,NA18552,NA18558,NA18561,NA18566,NA18572,NA18573,NA18576,NA18577,NA18582,NA18593,NA18594,NA18608,NA18609,NA18611,NA18612,NA18622,NA18623,NA18624,NA18632,NA18635,NA18636,NA18940,NA18942,NA18943,NA18944,NA18945,NA18948,NA18953,NA18956,NA18959,NA18961,NA18969,NA18972,NA18976,NA18978,NA18981,NA18991,NA18994,NA18995,NA18998,NA18999,NA19000,NA19003,NA19007 dgv68n67 1 112497872 112498375 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824231,nsv824220 M 31 0 2 "" AK8,NA18526 nsv824242 1 112497872 112498674 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1429578,nssv1431093,nssv1424760 M 31 0 3 "" AK14,AK18,AK2 esv2762183 1 112519166 112543378 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006179 M 1109 0 1 "" RW_0260 esv3412654 1 112537504 112537524 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673749,essv8673747,essv8673748 M 185 3 0 "" NA12891,NA12892,NA19238 esv3308724 1 112537511 112537512 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838615,essv7837827,essv7837244 M 185 3 0 "" NA12892,NA19238,NA19240 esv3303838 1 112537517 112537518 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7778182,essv7799307,essv7828293,essv7800428,essv7781725,essv7802208,essv7805268,essv7789045,essv7791543,essv7790674,essv7823097,essv7835061,essv7775358,essv7834334,essv7828882,essv7817711,essv7830989,essv7771156,essv7832904,essv7800615,essv7773403,essv7780240,essv7785974,essv7808470,essv7823418,essv7825799,essv7824167,essv7794799,essv7836626,essv7801086,essv7804475,essv7812543,essv7819861,essv7814848,essv7803619,essv7812027 M 185 36 0 "" NA07000,NA11881,NA11920,NA12003,NA12043,NA12045,NA12154,NA12716,NA12717,NA12763,NA12776,NA12874,NA12891,NA12892,NA18499,NA18501,NA18508,NA18510,NA18511,NA18564,NA18577,NA18592,NA18603,NA18853,NA18858,NA18944,NA18947,NA18949,NA18951,NA18960,NA18973,NA19005,NA19099,NA19108,NA19129,NA19238 esv3415376 1 112537520 112537539 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596090 M 185 1 0 "" NA12043 esv3421221 1 112537522 112537532 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901091,essv8901084,essv8901083,essv8901072,essv8901087,essv8901086,essv8901063,essv8901078,essv8901067,essv8901088,essv8901066,essv8901074,essv8901080,essv8901090,essv8901076,essv8901060,essv8901082,essv8901068,essv8901065,essv8901077,essv8901061,essv8901075,essv8901085,essv8901064,essv8901079,essv8901062,essv8901089,essv8901073,essv8901093,essv8901071,essv8901069 M 185 31 0 "" NA07000,NA11881,NA11920,NA12003,NA12045,NA12154,NA12716,NA12717,NA12763,NA12776,NA18499,NA18501,NA18508,NA18510,NA18511,NA18564,NA18577,NA18592,NA18603,NA18853,NA18858,NA18944,NA18947,NA18949,NA18951,NA18960,NA18973,NA19005,NA19099,NA19108,NA19129 nsv528561 1 112563162 112564616 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705177 M 2026 0 1 "" esv2762184 1 112603184 112607491 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006180 M 1109 0 1 "" RW_0211 esv3425142 1 112614352 112615950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691756 M 185 1 0 "" NA19239 nsv2454 1 112615372 112659782 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6838,nssv2317 M 9 0 2 "" NA12156,NA18555 esv1001069 1 112636278 112639366 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565310 M 3 0 1 "" HuRef nsv511710 1 112636507 112639603 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626351 M 1 0 1 "" 1 nsv498685 1 112636610 112639207 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585398 M 9 0 1 "" esv1390905 1 112636628 112639206 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3771414 M 2 0 1 "" HuRef nsv508526 1 112640919 112716738 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617345 M 4 0 1 "" CHM nsv831081 1 112736443 112924163 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448773 M 95 0 1 CTTNBP2NL,MIR4256,ST7L,WNT2B nsv159431 1 112793518 112793518 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178009 M 24 CTTNBP2NL nsv159278 1 112793533 112796480 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177856 M 24 CTTNBP2NL nsv506955 1 112804672 112810672 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617538,nssv623283,nssv620666 M 4 0 0 CTTNBP2NL,MIR4256 CHM,NA15510,NA18994 nsv1008375 1 112829794 112861744 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495932 M 29084 0 1 WNT2B esv1009068 1 112850515 112858930 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563680 M 3 0 1 WNT2B HuRef esv3339804 1 112873896 112873918 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863745,essv7863744 M 185 2 0 ST7L NA18520,NA18961 nsv159055 1 112971772 112972095 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177633 M 24 CAPZA1 esv3310239 1 112980743 112980744 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838127,essv7839028,essv7838370,essv7837275,essv7836893 M 185 5 0 CAPZA1 NA12878,NA12891,NA19238,NA19239,NA19240 esv3356260 1 112980744 112980754 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673757,essv8673758 M 185 2 0 CAPZA1 NA19239,NA19240 nsv946142 1 113014058 113015843 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782246,nssv1781471,nssv1782232,nssv1783194,nssv1781479,nssv1782248,nssv1782240,nssv1782254,nssv1781477,nssv1781470,nssv1782242,nssv1781460,nssv1782234,nssv1781461,nssv1782249,nssv1783196,nssv1782224,nssv1783184,nssv1782226,nssv1782256,nssv1782243,nssv1781457,nssv1782237,nssv1781487,nssv1782223,nssv1781453,nssv1782241,nssv1781490,nssv1781481,nssv1782251,nssv1782225,nssv1782257,nssv1782245,nssv1781464,nssv1782250,nssv1781454,nssv1782230,nssv1782244,nssv1781472,nssv1782221,nssv1782229,nssv1781451,nssv1782228,nssv1783190,nssv1781473,nssv1781484,nssv1781478,nssv1781486,nssv1782231,nssv1781483,nssv1781474,nssv1781488,nssv1781476,nssv1781465,nssv1781475,nssv1783192,nssv1782235,nssv1783191,nssv1782252,nssv1783185,nssv1782227,nssv1781462,nssv1782233,nssv1782258,nssv1782238,nssv1781482,nssv1781480,nssv1781468,nssv1782222,nssv1781448,nssv1782239,nssv1781455,nssv1782236,nssv1781485,nssv1781467,nssv1781447,nssv1781459,nssv1781466,nssv1781452,nssv1783186,nssv1781458,nssv1781450,nssv1782259,nssv1781463,nssv1782253,nssv1783188,nssv1782247,nssv1781491,nssv1783189,nssv1781456,nssv1783193,nssv1782255,nssv1781449,nssv1781489,nssv1781469,nssv1783187,nssv1783195 M 97 10 0 CAPZA1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv997362 1 113036343 113044820 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564850 M 3 0 1 MOV10 HuRef esv27598 1 113047841 113152298 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18511 M 40 0 1 FAM19A3,PPM1J,RHOC NA18523 nsv998794 1 113048153 113111941 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499441 M 29084 1 0 FAM19A3,PPM1J,RHOC nsv547566 1 113049888 113103180 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722699 M 17421 1 0 FAM19A3,PPM1J,RHOC esv2414426 1 113050432 113050810 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4619877 M 1 0 1 RHOC NA18507 nsv818378 1 113065234 113236341 CNV gain Wang_et_al_2007 17921354 SNP array nssv1415610 M 112 1 0 FAM19A3,LOC100996702 NA12248 nsv946143 1 113092298 113092798 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781520,nssv1781532,nssv1781571,nssv1781554,nssv1781521,nssv1781539,nssv1781511,nssv1781526,nssv1781572,nssv1781531,nssv1781573,nssv1781555,nssv1781494,nssv1781562,nssv1781513,nssv1781541,nssv1781512,nssv1781527,nssv1781503,nssv1781492,nssv1781508,nssv1781546,nssv1781574,nssv1781544,nssv1781495,nssv1781533,nssv1781499,nssv1781549,nssv1781497,nssv1781581,nssv1781506,nssv1781525,nssv1781516,nssv1781552,nssv1781576,nssv1781567,nssv1781504,nssv1781566,nssv1781578,nssv1781522,nssv1781500,nssv1781537,nssv1781569,nssv1781557,nssv1781496,nssv1781519,nssv1781523,nssv1781517,nssv1781577,nssv1781545,nssv1781493,nssv1781582,nssv1781505,nssv1781583,nssv1781514,nssv1781585,nssv1781509,nssv1781551,nssv1781502,nssv1781548,nssv1781510,nssv1781542,nssv1781570,nssv1781536,nssv1781501,nssv1781538,nssv1781498,nssv1781540,nssv1781507,nssv1781515,nssv1781575,nssv1781529,nssv1781530,nssv1781586,nssv1781568,nssv1781524,nssv1781543,nssv1781587,nssv1781584,nssv1781550,nssv1781558,nssv1781553,nssv1781563,nssv1781565,nssv1781535,nssv1781561,nssv1781528,nssv1781556,nssv1781580,nssv1781564,nssv1781559,nssv1781547,nssv1781560,nssv1781588,nssv1781518,nssv1781579,nssv1781534 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1004102 1 113097328 113352733 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487636 M 29084 1 0 AKR7A2P1,LOC100996702,SLC16A1,SLC16A1-AS1 nsv999123 1 113099008 113153695 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702054 M 29084 0 1 "" nsv526064 1 113099290 113103180 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702304 M 2026 0 1 "" nsv547567 1 113115086 113185538 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173119 M 17421 0 1 LOC100996702 HGDP00617 esv1703229 1 113118096 113118450 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3736730 M 2 0 1 "" HuRef esv2762185 1 113147631 113152924 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006181 M 1109 0 1 "" RW_0570 dgv290n100 1 113152452 113207426 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000352,nsv1011519 M 29084 0 2 LOC100996702 nsv999915 1 113161668 113486356 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485018 M 29084 1 0 AKR7A2P1,LOC100996251,LOC100996702,LRIG2,SLC16A1,SLC16A1-AS1 esv24626 1 113176960 113654338 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18293,esv12789,esv15442 M 40 0 7 AKR7A2P1,LOC100996251,LOC100996702,LOC643441,LRIG2,SLC16A1,SLC16A1-AS1 NA18511,NA18523,NA18861,NA18907,NA18909,NA19099,NA19225 nsv522967 1 113185538 113202513 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698637 M 2026 0 1 LOC100996702 esv1681392 1 113192068 113192068 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4155546 M 2 1 0 LOC100996702 HuRef nsv946144 1 113230148 113247669 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1781600,nssv1781625,nssv1781620,nssv1782897,nssv1781603,nssv1782911,nssv1782900,nssv1781589,nssv1781608,nssv1781612,nssv1782905,nssv1781636,nssv1782898,nssv1782877,nssv1782901,nssv1781615,nssv1781609,nssv1782914,nssv1781605,nssv1782891,nssv1781610,nssv1782882,nssv1781594,nssv1782913,nssv1781598,nssv1781624,nssv1782906,nssv1782878,nssv1781613,nssv1781628,nssv1782902,nssv1782881,nssv1781596,nssv1781631,nssv1781597,nssv1782895,nssv1782904,nssv1781632,nssv1782903,nssv1781626,nssv1781591,nssv1781641,nssv1781593,nssv1782910,nssv1781614,nssv1781639,nssv1782907,nssv1782880,nssv1781592,nssv1781619,nssv1781617,nssv1782887,nssv1781595,nssv1782917,nssv1782899,nssv1782888,nssv1781590,nssv1781640,nssv1781599,nssv1781633,nssv1781606,nssv1781616,nssv1781602,nssv1782885,nssv1781611,nssv1781638,nssv1781618,nssv1782894,nssv1781607,nssv1782915,nssv1781601,nssv1781629,nssv1781604,nssv1782883,nssv1782909,nssv1781643,nssv1782884,nssv1782908,nssv1781634,nssv1781642,nssv1782896,nssv1781635,nssv1781623,nssv1782892,nssv1782912,nssv1781630,nssv1782893,nssv1782879,nssv1781621,nssv1782916,nssv1782886,nssv1782889,nssv1782890,nssv1781622,nssv1781627,nssv1781637,nssv1782876 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946145 1 113267780 113268580 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782943,nssv1782984,nssv1783000,nssv1783013,nssv1782929,nssv1782965,nssv1783004,nssv1782983,nssv1782996,nssv1783012,nssv1783002,nssv1783010,nssv1782997,nssv1782951,nssv1782932,nssv1782994,nssv1782934,nssv1782976,nssv1782933,nssv1782956,nssv1782925,nssv1782950,nssv1782946,nssv1782945,nssv1782937,nssv1782975,nssv1782938,nssv1782960,nssv1782995,nssv1782964,nssv1782921,nssv1782966,nssv1782998,nssv1782962,nssv1782919,nssv1782961,nssv1782942,nssv1783005,nssv1782923,nssv1782980,nssv1782928,nssv1782977,nssv1782947,nssv1782988,nssv1782931,nssv1782948,nssv1782926,nssv1782970,nssv1782939,nssv1782987,nssv1782920,nssv1782944,nssv1783001,nssv1782918,nssv1782940,nssv1782954,nssv1782927,nssv1782993,nssv1782936,nssv1782959,nssv1782949,nssv1782952,nssv1782935,nssv1782972,nssv1783003,nssv1782985,nssv1782999,nssv1782981,nssv1782922,nssv1782963,nssv1782930,nssv1782986,nssv1782924,nssv1783009,nssv1782979,nssv1782953,nssv1782968,nssv1783007,nssv1782941,nssv1782982,nssv1783008,nssv1782958,nssv1782973,nssv1782991,nssv1782978,nssv1782967,nssv1782971,nssv1783011,nssv1782990,nssv1783014,nssv1782974,nssv1782957,nssv1782989,nssv1782955,nssv1783006,nssv1782969,nssv1782992 M 97 10 0 AKR7A2P1,SLC16A1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3894045 1 113271644 113523226 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25791795 M 3017 1 0 LOC100996251,LRIG2,SLC16A1,SLC16A1-AS1 nsv480662 1 113305638 113305638 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019634 M 9 0 0 SLC16A1-AS1 nsv509435 1 113323601 113391866 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621100 M 4 1 0 LOC100996251 NA15510 esv2592828 1 113329982 113334641 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5210289 M 1 0 1 "" NA18507 nsv512746 1 113343684 113343887 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625373 M 1 1 0 "" 1 esv1204934 1 113343812 113343812 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4097240 M 2 1 0 "" HuRef nsv475058 1 113363156 113363156 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020369 M 9 1 0 LOC100996251 NA18956 esv990846 1 113374743 113377662 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564479 M 3 0 1 LOC100996251 HuRef nsv474036 1 113383127 113383127 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010851 M 9 1 0 LOC100996251 NA12156 nsv508537 1 113391866 113437326 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617355 M 4 0 1 LOC100996251,LRIG2 CHM nsv437002 1 113394111 113460410 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466883 M 60 0 1 LOC100996251,LRIG2 NA07348 esv2474740 1 113411201 113416322 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5369436 M 1 0 1 LOC100996251 NA18507 nsv435694 1 113411786 113417817 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466239 M 2 0 1 LOC100996251,LRIG2 NA15510 esv2497412 1 113412552 113416374 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5277106 M 1 0 1 LOC100996251 NA18507 esv1005491 1 113412634 113415300 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564475 M 3 0 1 LOC100996251 HuRef esv2150876 1 113412657 113415384 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4744159 M 1 0 1 LOC100996251 NA18507 nsv511711 1 113412753 113415801 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626352 M 1 0 1 LOC100996251 1 nsv160886 1 113412863 113415317 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179464 M 24 LOC100996251 nsv946149 1 113513073 113513684 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783175,nssv1783135,nssv1783090,nssv1783182,nssv1783173,nssv1783154,nssv1783099,nssv1783116,nssv1783092,nssv1783150,nssv1783171,nssv1783183,nssv1783105,nssv1783140,nssv1783113,nssv1783158,nssv1783108,nssv1784109,nssv1783117,nssv1783134,nssv1783168,nssv1783119,nssv1783174,nssv1783138,nssv1783109,nssv1783145,nssv1783111,nssv1783149,nssv1783166,nssv1783143,nssv1783167,nssv1783126,nssv1783169,nssv1783133,nssv1783170,nssv1783125,nssv1783114,nssv1783115,nssv1783101,nssv1783136,nssv1783118,nssv1783128,nssv1783094,nssv1783124,nssv1783091,nssv1783155,nssv1783095,nssv1783161,nssv1783097,nssv1783123,nssv1783110,nssv1783151,nssv1783102,nssv1783160,nssv1783100,nssv1783129,nssv1783104,nssv1783146,nssv1783103,nssv1783156,nssv1783172,nssv1783152,nssv1783096,nssv1783137,nssv1783106,nssv1783127,nssv1783093,nssv1783162,nssv1783107,nssv1783148,nssv1783120,nssv1783132,nssv1783098,nssv1783176,nssv1783112,nssv1783180,nssv1783178,nssv1783130,nssv1783131,nssv1783144,nssv1783177,nssv1783147,nssv1783164,nssv1783163,nssv1783141,nssv1784108,nssv1783157,nssv1783159,nssv1783121,nssv1783165,nssv1783089,nssv1783181,nssv1783122,nssv1783179,nssv1783139,nssv1783153,nssv1783142 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1648118 1 113517168 113517457 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3821552 M 2 0 1 "" HuRef esv1750565 1 113517509 113517509 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3983796 M 2 1 0 "" HuRef nsv2465 1 113533112 113578128 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7464 M 9 0 1 LOC643441 NA12156 nsv946150 1 113542410 113543617 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782599,nssv1782612,nssv1782655,nssv1782662,nssv1782588,nssv1782666,nssv1784115,nssv1782648,nssv1782653,nssv1782616,nssv1782652,nssv1782669,nssv1782654,nssv1782620,nssv1784111,nssv1782664,nssv1782583,nssv1782661,nssv1782651,nssv1782618,nssv1784117,nssv1782608,nssv1782658,nssv1782639,nssv1782602,nssv1782670,nssv1782659,nssv1782640,nssv1784118,nssv1782645,nssv1782603,nssv1782634,nssv1782590,nssv1782668,nssv1782587,nssv1782638,nssv1782594,nssv1782600,nssv1782585,nssv1782637,nssv1782593,nssv1782606,nssv1782589,nssv1782644,nssv1784113,nssv1782631,nssv1782598,nssv1782610,nssv1782595,nssv1782624,nssv1782586,nssv1782642,nssv1782591,nssv1782635,nssv1782584,nssv1782607,nssv1782660,nssv1782643,nssv1784116,nssv1782633,nssv1782657,nssv1782614,nssv1784112,nssv1782601,nssv1782605,nssv1782623,nssv1782656,nssv1782632,nssv1782592,nssv1782665,nssv1782596,nssv1782625,nssv1784114,nssv1782611,nssv1784110,nssv1782619,nssv1782647,nssv1782636,nssv1782641,nssv1782667,nssv1782617,nssv1782597,nssv1782630,nssv1782646,nssv1782626,nssv1782627,nssv1782621,nssv1782604,nssv1782609,nssv1782615,nssv1782629,nssv1782650,nssv1782628,nssv1782622,nssv1782663,nssv1782613,nssv1782649 M 97 10 0 LOC643441 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv520749 1 113574256 113582881 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694399 M 2026 0 1 "" esv8291 1 113600931 113601875 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30732 M 1 0 0 "" esv5296 1 113601086 113601722 CNV loss Wang_et_al_2008 18987735 Sequencing essv27737 M 1 0 1 "" YH esv1726981 1 113601154 113601616 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3815235 M 2 0 1 "" HuRef dgv291n100 1 113641874 113770940 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010110,nsv999873,nsv1014757 M 29084 3 0 MAGI3 dgv292n100 1 113658135 113732302 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012143,nsv1009534,nsv1013228,nsv1005599 M 29084 4 0 "" esv23869 1 113664475 114702640 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21206,esv11517 M 40 0 2 AP4B1,AP4B1-AS1,BCL2L15,DCLRE1B,HIPK1,MAGI3,OLFML3,PHTF1,PTPN22,RSBN1,SYT6 NA12414,NA18523 esv1432098 1 113689017 113690049 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4176408 M 2 0 1 "" HuRef esv1257635 1 113760311 113760311 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3633723 M 2 1 0 MAGI3 HuRef esv1062910 1 113760356 113760356 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4171997 M 2 1 0 MAGI3 HuRef esv1673662 1 113760610 113760610 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3679714 M 2 1 0 MAGI3 HuRef nsv946151 1 113793378 113795384 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782693,nssv1782727,nssv1782700,nssv1782741,nssv1782686,nssv1782715,nssv1782750,nssv1782762,nssv1782702,nssv1782747,nssv1782680,nssv1782710,nssv1782749,nssv1782734,nssv1782755,nssv1782758,nssv1782748,nssv1782746,nssv1782678,nssv1782701,nssv1782699,nssv1782760,nssv1782673,nssv1782767,nssv1782691,nssv1782744,nssv1782679,nssv1782730,nssv1782684,nssv1782765,nssv1782690,nssv1782738,nssv1782751,nssv1782726,nssv1782687,nssv1782707,nssv1782683,nssv1782729,nssv1782752,nssv1782724,nssv1782676,nssv1782743,nssv1782695,nssv1782763,nssv1782685,nssv1782708,nssv1782696,nssv1782721,nssv1782757,nssv1782764,nssv1782692,nssv1782722,nssv1782682,nssv1782716,nssv1782674,nssv1782735,nssv1782754,nssv1782705,nssv1782675,nssv1782711,nssv1782688,nssv1782717,nssv1782681,nssv1782737,nssv1782756,nssv1782732,nssv1782689,nssv1782671,nssv1782677,nssv1782740,nssv1782672,nssv1782719,nssv1782753,nssv1782739,nssv1782698,nssv1782703,nssv1782720,nssv1782731,nssv1782742,nssv1782728,nssv1782709,nssv1782759,nssv1782713,nssv1782694,nssv1782718,nssv1782697,nssv1782706,nssv1782766,nssv1782761,nssv1782736,nssv1782733,nssv1782723,nssv1782714,nssv1782712,nssv1782745,nssv1782704,nssv1782725 M 97 10 0 MAGI3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508548 1 113839086 113849350 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618985 M 4 0 1 MAGI3 NA10860 nsv435905 1 113839225 113847608 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466251 M 2 0 1 MAGI3 NA15510 nsv476753 1 113839410 113839410 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015707 M 9 1 0 MAGI3 NA12878 esv5987 1 113841108 113847610 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28428 M 1 0 0 MAGI3 nsv824254 1 113847279 113847998 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1421468,nssv1432285 M 31 2 0 MAGI3 NA18972,NA18997 nsv946152 1 113853207 113854024 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1782777,nssv1782840,nssv1782769,nssv1782803,nssv1782779,nssv1782804,nssv1782782,nssv1782860,nssv1782846,nssv1782798,nssv1782780,nssv1782833,nssv1782848,nssv1782814,nssv1782847,nssv1782794,nssv1782852,nssv1782791,nssv1782845,nssv1782856,nssv1782778,nssv1782810,nssv1782796,nssv1782807,nssv1782790,nssv1782864,nssv1782799,nssv1782863,nssv1782849,nssv1782815,nssv1782783,nssv1782857,nssv1782854,nssv1782827,nssv1782788,nssv1782858,nssv1782787,nssv1782824,nssv1782784,nssv1782809,nssv1782771,nssv1782835,nssv1782853,nssv1782830,nssv1782773,nssv1782820,nssv1782792,nssv1782808,nssv1782789,nssv1782821,nssv1782781,nssv1782839,nssv1782776,nssv1782843,nssv1782770,nssv1782826,nssv1782851,nssv1782829,nssv1782775,nssv1782861,nssv1782797,nssv1782805,nssv1782772,nssv1782832,nssv1782785,nssv1782802,nssv1782793,nssv1782862,nssv1782786,nssv1782818,nssv1782850,nssv1782841,nssv1782774,nssv1782855,nssv1782817,nssv1782844,nssv1782842,nssv1782825,nssv1782831,nssv1782828,nssv1782822,nssv1782812,nssv1782801,nssv1782806,nssv1782837,nssv1782838,nssv1782800,nssv1782859,nssv1782813,nssv1782819,nssv1782816,nssv1782834,nssv1782795,nssv1782836,nssv1782811,nssv1782823,nssv1782768 M 97 10 0 MAGI3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv437013 1 113867478 113930615 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466894 M 60 0 1 MAGI3 NA12707 nsv1012324 1 113936656 114008366 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702057 M 29084 0 1 MAGI3 nsv831093 1 114055690 114179758 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448784 M 95 0 1 PHTF1,PTPN22,RSBN1 esv2179916 1 114068290 114072857 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4704253 M 1 0 1 PHTF1 NA18507 nsv820192 1 114108389 114108834 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418955 M 2 0 1 RSBN1 AK1 esv2461577 1 114143720 114144903 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5265549 M 1 0 1 RSBN1 NA18507 nsv473902 1 114204922 114204922 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014960 M 9 1 0 AP4B1-AS1,PTPN22 NA12156 nsv819786 1 114245635 114247761 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419389 M 2 0 1 AP4B1 AK1 nsv523196 1 114291212 114291496 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698912 M 2026 0 1 HIPK1 nsv463284 1 114387113 114425390 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539306 M 1557 0 1 "" 1780862015_A dgv516n54 1 114387113 114426948 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547568,nsv547569 M 17421 0 2 "" 1780862015_A esv3326355 1 114447573 114453245 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808883 M 185 0 0 SYT6 NA12878 nsv528503 1 114450770 114455198 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705108 M 2026 0 1 SYT6 nsv2476 1 114452945 114485558 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1349 M 9 1 0 SYT6 NA19240 nsv1000894 1 114470697 114483603 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485229 M 29084 1 0 SYT6 nsv517962 1 114477914 114479520 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695375 M 2026 0 1 SYT6 nsv2487 1 114535431 114580065 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2326 M 9 0 1 "" NA18555 esv1219589 1 114549413 114549413 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4134041 M 2 1 0 "" HuRef esv2570808 1 114569407 114569513 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5330839 M 1 0 1 "" NA18507 dgv9n17 1 114605048 114638544 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437024,nsv437036 M 60 0 2 "" NA10857,NA12752 nsv437959 1 114609082 114610154 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv467997,nssv468008,nssv468019,nssv468030 M 269 0 4 "" NA10857,NA12044,NA12752,NA12760 nsv1005143 1 114611116 114623344 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489938 M 29084 0 1 "" esv28734 1 114720853 115349442 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20196 M 40 0 1 AMPD1,BCAS2,CSDE1,DENND2C,NRAS,SIKE1,SYCP1,TRIM33 NA18523 nsv831104 1 114799646 114971379 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448795 M 95 0 1 BCAS2,DENND2C,TRIM33 nsv946155 1 114804216 114806022 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783889,nssv1783878,nssv1783914,nssv1783870,nssv1783913,nssv1783854,nssv1783923,nssv1783855,nssv1783897,nssv1783934,nssv1783920,nssv1783875,nssv1783885,nssv1783930,nssv1783901,nssv1783865,nssv1783904,nssv1783872,nssv1783929,nssv1783859,nssv1783916,nssv1783864,nssv1783883,nssv1783867,nssv1783896,nssv1783862,nssv1783917,nssv1783937,nssv1783853,nssv1783874,nssv1783947,nssv1783860,nssv1783888,nssv1783863,nssv1783924,nssv1783873,nssv1783911,nssv1783933,nssv1783941,nssv1783877,nssv1783876,nssv1783866,nssv1783908,nssv1783931,nssv1783949,nssv1783861,nssv1783880,nssv1783858,nssv1783942,nssv1783939,nssv1783898,nssv1783932,nssv1783943,nssv1783938,nssv1783906,nssv1783881,nssv1783895,nssv1783856,nssv1783907,nssv1783882,nssv1783893,nssv1783868,nssv1783899,nssv1783936,nssv1783927,nssv1783935,nssv1783900,nssv1783884,nssv1783886,nssv1783857,nssv1783945,nssv1783871,nssv1783894,nssv1783869,nssv1783892,nssv1783887,nssv1783925,nssv1783944,nssv1783903,nssv1783912,nssv1783915,nssv1783910,nssv1783909,nssv1783918,nssv1783922,nssv1783940,nssv1783890,nssv1783928,nssv1783905,nssv1783879,nssv1783921,nssv1783891,nssv1783948,nssv1783926,nssv1783902,nssv1783946,nssv1783919 M 97 10 0 TRIM33 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2474891 1 114844381 114845777 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5184224 M 1 0 1 TRIM33 NA18507 esv2102268 1 114844840 114845544 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4783462 M 1 0 1 TRIM33 NA18507 esv3365569 1 114861520 114861534 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863746 M 185 1 0 "" NA12005 nsv946156 1 114878996 114882411 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783975,nssv1783517,nssv1783965,nssv1783986,nssv1783951,nssv1783993,nssv1783510,nssv1784010,nssv1783959,nssv1784024,nssv1784027,nssv1784008,nssv1783507,nssv1784025,nssv1783957,nssv1783985,nssv1783512,nssv1783523,nssv1783513,nssv1784011,nssv1783962,nssv1783521,nssv1783964,nssv1783994,nssv1783979,nssv1783982,nssv1783972,nssv1784009,nssv1783506,nssv1784021,nssv1783952,nssv1783998,nssv1783960,nssv1783988,nssv1783956,nssv1784005,nssv1783970,nssv1784022,nssv1783953,nssv1783999,nssv1783966,nssv1783516,nssv1783969,nssv1784013,nssv1783974,nssv1783950,nssv1783961,nssv1784020,nssv1783508,nssv1783519,nssv1783514,nssv1784003,nssv1783955,nssv1784000,nssv1783958,nssv1783515,nssv1783971,nssv1784018,nssv1783967,nssv1784023,nssv1783978,nssv1783976,nssv1783981,nssv1784014,nssv1783963,nssv1783990,nssv1783954,nssv1783977,nssv1783968,nssv1783997,nssv1783509,nssv1783996,nssv1783511,nssv1783992,nssv1784026,nssv1784004,nssv1783989,nssv1783973,nssv1783518,nssv1784019,nssv1783522,nssv1784007,nssv1784006,nssv1783991,nssv1784001,nssv1783524,nssv1784015,nssv1783980,nssv1783995,nssv1783984,nssv1783983,nssv1783520,nssv1784002,nssv1783987,nssv1784016,nssv1784012,nssv1784017 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474586 1 114890854 114890854 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018196 M 9 1 0 "" NA18956 nsv2498 1 114979175 115012698 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1358 M 9 1 0 DENND2C NA19240 nsv478042 1 115002440 115002440 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020149 M 9 1 0 DENND2C NA18517 nsv946157 1 115047917 115049711 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783556,nssv1783597,nssv1783526,nssv1783621,nssv1783527,nssv1783560,nssv1783610,nssv1783559,nssv1783539,nssv1783572,nssv1783536,nssv1783586,nssv1783609,nssv1783588,nssv1783528,nssv1783578,nssv1783550,nssv1783617,nssv1783603,nssv1783589,nssv1783541,nssv1783620,nssv1783540,nssv1783587,nssv1783546,nssv1783564,nssv1783545,nssv1783565,nssv1783544,nssv1783584,nssv1783604,nssv1783548,nssv1783531,nssv1783592,nssv1783605,nssv1783551,nssv1783549,nssv1783585,nssv1783607,nssv1783567,nssv1783553,nssv1783599,nssv1783530,nssv1783575,nssv1783537,nssv1783593,nssv1783547,nssv1783576,nssv1783533,nssv1783613,nssv1783529,nssv1783563,nssv1783606,nssv1783557,nssv1783534,nssv1783561,nssv1783608,nssv1783562,nssv1783542,nssv1783577,nssv1783602,nssv1783612,nssv1783532,nssv1783594,nssv1783543,nssv1783600,nssv1783538,nssv1783598,nssv1783535,nssv1783582,nssv1783554,nssv1783568,nssv1783611,nssv1783558,nssv1783619,nssv1783596,nssv1783618,nssv1783570,nssv1783525,nssv1783574,nssv1783583,nssv1783601,nssv1783571,nssv1783591,nssv1783552,nssv1783555,nssv1783615,nssv1783579,nssv1783566,nssv1783580,nssv1783616,nssv1783590,nssv1783573,nssv1783614,nssv1783595,nssv1783569,nssv1783581 M 97 10 0 NRAS HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv824265 1 115113906 115118486 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440827,nssv1434879 M 31 2 0 SIKE1 NA18942,NA18969 esv8837 1 115186439 115186620 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31278 M 1 0 0 "" nsv524392 1 115209396 115261592 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700309 M 2026 1 0 SYCP1 nsv528883 1 115220544 115392521 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705564 M 2026 0 1 SYCP1,TSHB,TSPAN2 esv2610148 1 115245732 115247352 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5191894 M 1 0 1 SYCP1 NA18507 esv2347804 1 115246417 115247137 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4869932 M 1 0 1 SYCP1 NA18507 nsv946160 1 115257975 115260158 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783647,nssv1783658,nssv1783653,nssv1783709,nssv1783623,nssv1783689,nssv1783651,nssv1783654,nssv1783628,nssv1783661,nssv1783631,nssv1783692,nssv1783636,nssv1783662,nssv1783634,nssv1783681,nssv1783708,nssv1783685,nssv1783707,nssv1783690,nssv1783624,nssv1783659,nssv1783706,nssv1783663,nssv1783633,nssv1783657,nssv1783641,nssv1783680,nssv1783642,nssv1783711,nssv1783700,nssv1783695,nssv1783638,nssv1783677,nssv1783632,nssv1783671,nssv1783646,nssv1783679,nssv1783630,nssv1783676,nssv1783704,nssv1783710,nssv1783627,nssv1783645,nssv1783650,nssv1783669,nssv1783637,nssv1783683,nssv1783703,nssv1783697,nssv1783625,nssv1783673,nssv1783699,nssv1783675,nssv1783643,nssv1783666,nssv1783702,nssv1783718,nssv1783639,nssv1783712,nssv1783626,nssv1783688,nssv1783635,nssv1783687,nssv1783644,nssv1783696,nssv1783640,nssv1783648,nssv1783701,nssv1783674,nssv1783705,nssv1783684,nssv1783629,nssv1783693,nssv1783664,nssv1783691,nssv1783698,nssv1783682,nssv1783672,nssv1783717,nssv1783649,nssv1783678,nssv1783660,nssv1783665,nssv1783714,nssv1783668,nssv1783652,nssv1783667,nssv1783716,nssv1783655,nssv1783656,nssv1783713,nssv1783622,nssv1783686,nssv1783670,nssv1783715,nssv1783694 M 97 10 0 SYCP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3336733 1 115345483 115345495 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863748,essv7863747 M 185 2 0 "" NA12005,NA18871 esv26121 1 115364825 115904214 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19081,esv18479,esv11355 M 40 0 6 NGF,TSHB,TSPAN2 NA11931,NA11995,NA12287,NA12749,NA18517,NA18523 nsv463295 1 115373888 115410726 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539317 M 1557 0 1 TSHB,TSPAN2 1780854464_A nsv547570 1 115373888 115410726 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173121 M 17421 0 1 TSHB,TSPAN2 1780854464_A esv2570867 1 115507074 115508788 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5286590 M 1 0 1 "" NA18507 esv34370 1 115525218 115969481 CNV gain Pinto_et_al_2007 17911159 SNP array essv6978647,essv6986672,essv6978648,essv6978649,essv6990265 M 771 5 0 NGF NA12057 nsv818389 1 115529471 115870562 CNV gain Wang_et_al_2007 17921354 SNP array nssv1416214 M 112 1 0 NGF NA12057 nsv472577 1 115572942 115572942 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016666 M 9 1 0 "" NA18555 esv5685 1 115598281 115598797 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28126 M 1 0 0 "" esv2937 1 115598316 115598887 CNV loss Wang_et_al_2008 18987735 Sequencing essv25378 M 1 0 1 "" YH esv988866 1 115598422 115598705 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570175 M 3 0 1 "" HuRef esv1361446 1 115598425 115598709 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4108038 M 2 0 1 "" HuRef nsv159371 1 115681450 115686021 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177949 M 24 NGF nsv523503 1 115699858 115708532 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699274 M 2026 0 1 "" esv2378285 1 115715254 115715693 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4516840 M 1 0 1 "" NA18507 esv1009342 1 115818177 115818878 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586199 M 3 1 0 "" HuRef nsv946161 1 115908757 115910903 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783720,nssv1783788,nssv1784729,nssv1783763,nssv1783797,nssv1783781,nssv1783748,nssv1783762,nssv1783725,nssv1783774,nssv1783733,nssv1784734,nssv1784724,nssv1783719,nssv1783738,nssv1783752,nssv1784728,nssv1784730,nssv1784727,nssv1783789,nssv1783730,nssv1783758,nssv1783741,nssv1783792,nssv1783735,nssv1783779,nssv1783721,nssv1783746,nssv1783724,nssv1784739,nssv1783743,nssv1783786,nssv1783729,nssv1783784,nssv1783722,nssv1783776,nssv1783747,nssv1783756,nssv1783732,nssv1783795,nssv1783796,nssv1784733,nssv1783731,nssv1783775,nssv1783727,nssv1783768,nssv1783734,nssv1783767,nssv1783744,nssv1783742,nssv1784725,nssv1783753,nssv1783739,nssv1783782,nssv1783726,nssv1783787,nssv1783750,nssv1783773,nssv1783740,nssv1783772,nssv1783798,nssv1783769,nssv1784726,nssv1784737,nssv1783799,nssv1783777,nssv1783736,nssv1783760,nssv1783728,nssv1783759,nssv1783723,nssv1783745,nssv1783737,nssv1784736,nssv1783794,nssv1783770,nssv1783751,nssv1783783,nssv1783757,nssv1783761,nssv1783791,nssv1783778,nssv1783771,nssv1784738,nssv1783790,nssv1783764,nssv1783754,nssv1784731,nssv1784735,nssv1783749,nssv1783780,nssv1783793,nssv1783785,nssv1783766,nssv1783765,nssv1784732,nssv1783755 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2011660 1 115912498 115912945 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4770204 M 1 0 1 "" NA18507 esv27976 1 115936840 116479150 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10537,esv12135,esv15965 M 40 0 19 CASQ2,MAB21L3,NHLH2,SLC22A15,VANGL1 NA11931,NA12004,NA12006,NA12044,NA12239,NA12287,NA12749,NA12828,NA12878,NA15510,NA18508,NA18517,NA18523,NA18858,NA18861,NA18907,NA19099,NA19108,NA19114 nsv2509 1 116001788 116037547 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4520 M 9 0 1 VANGL1 NA12878 nsv831115 1 116005394 116195842 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448806 M 95 1 0 CASQ2,NHLH2,VANGL1 dgv293n100 1 116012579 116043846 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005859,nsv1008967 M 29084 0 3 VANGL1 nsv547571 1 116027982 116032864 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722701 M 17421 0 1 VANGL1 esv994532 1 116030666 116038610 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563468 M 3 0 1 VANGL1 HuRef dgv69n67 1 116030693 116034322 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824276,nsv824287 M 31 0 13 VANGL1 AK18,AK20,AK4,AK8,NA18542,NA18552,NA18592,NA18942,NA18951,NA18968,NA18969,NA18973,NA18997 esv7661 1 116030772 116034602 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30102 M 1 0 0 VANGL1 esv2760632 1 116030886 116086176 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6995556,essv6995534,essv6995545 M 1109 3 0 CASQ2,VANGL1 SW_0552,SW_0653,SW_1466 dgv517n54 1 116031523 116033467 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547578,nsv547577,nsv547572,nsv547574,nsv547573 M 17421 0 31 VANGL1 dgv518n54 1 116031523 116034933 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547579,nsv547576,nsv547575 M 17421 0 122 VANGL1 nsv547580 1 116032084 116033467 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722857,nssv722855,nssv722856 M 17421 1 2 VANGL1 dgv519n54 1 116032084 116034288 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547582,nsv547581,nsv547584,nsv547583 M 17421 0 5 VANGL1 nsv524619 1 116034933 116086467 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700580 M 2026 1 0 CASQ2,VANGL1 nsv1000760 1 116037469 116086176 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485100 M 29084 1 0 CASQ2,VANGL1 nsv547585 1 116040891 116089205 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722863 M 17421 1 0 CASQ2,VANGL1 esv3430953 1 116048061 116048067 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863749 M 185 1 0 CASQ2 NA18953 nsv508559 1 116104464 116181414 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618986 M 4 0 1 CASQ2,NHLH2 NA10860 esv2458208 1 116104987 116105977 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5263430 M 1 1 0 CASQ2 NA18507 nsv946163 1 116191068 116201881 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784757,nssv1784781,nssv1784762,nssv1784780,nssv1784817,nssv1784782,nssv1784759,nssv1784803,nssv1784753,nssv1784799,nssv1784826,nssv1784806,nssv1784746,nssv1784809,nssv1784744,nssv1784779,nssv1784755,nssv1784827,nssv1784742,nssv1784773,nssv1784741,nssv1784786,nssv1784769,nssv1784816,nssv1784821,nssv1784796,nssv1784820,nssv1784777,nssv1784761,nssv1784794,nssv1784824,nssv1784834,nssv1784765,nssv1784770,nssv1784749,nssv1784814,nssv1784750,nssv1784810,nssv1784771,nssv1784830,nssv1784743,nssv1784831,nssv1784760,nssv1784783,nssv1784752,nssv1784815,nssv1784754,nssv1784829,nssv1784764,nssv1784790,nssv1784747,nssv1784802,nssv1784745,nssv1784798,nssv1784748,nssv1784778,nssv1784822,nssv1784811,nssv1784768,nssv1784807,nssv1784825,nssv1784774,nssv1784823,nssv1784836,nssv1784756,nssv1784828,nssv1784758,nssv1784767,nssv1784819,nssv1784766,nssv1784818,nssv1784772,nssv1784751,nssv1784785,nssv1784833,nssv1784763,nssv1784791,nssv1784792,nssv1784793,nssv1784801,nssv1784776,nssv1784795,nssv1784832,nssv1784788,nssv1784835,nssv1784804,nssv1784812,nssv1784797,nssv1784789,nssv1784787,nssv1784740,nssv1784784,nssv1784775,nssv1784813,nssv1784805,nssv1784800,nssv1784808 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2522498 1 116223332 116224180 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5288889 M 1 1 0 "" NA18507 esv988278 1 116267848 116267853 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573833 M 3 1 0 "" HuRef esv1308427 1 116267849 116267849 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3912573 M 2 1 0 "" HuRef esv2760079 1 116286456 116292844 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006190,essv7006184,essv7006182,essv7006183,essv7006185,essv7006187,essv7006186 M 1109 0 7 "" RW_0049,RW_0060,RW_0084,RW_0092,RW_0116,RW_0181,RW_0549 nsv2522 1 116344127 116364486 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5797 M 9 1 0 SLC22A15 NA19129 nsv528884 1 116380539 116447280 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705565 M 2026 0 1 SLC22A15 nsv831126 1 116407726 116575906 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448817 M 95 1 0 MAB21L3,SLC22A15 nsv831137 1 116511148 116662942 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448828 M 95 1 0 "" esv27816 1 116535150 116536098 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16476 M 40 0 1 "" NA19190 nsv473322 1 116536348 116536348 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014415 M 9 1 0 "" NA19129 nsv946164 1 116537794 116538294 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784841,nssv1784860,nssv1784862,nssv1784905,nssv1784839,nssv1784932,nssv1784854,nssv1784884,nssv1784859,nssv1784891,nssv1784848,nssv1784900,nssv1784919,nssv1784898,nssv1784849,nssv1784885,nssv1784850,nssv1784907,nssv1784856,nssv1784883,nssv1784923,nssv1784871,nssv1784846,nssv1784879,nssv1784838,nssv1784908,nssv1784922,nssv1784906,nssv1784918,nssv1784875,nssv1784843,nssv1784890,nssv1784865,nssv1784872,nssv1784921,nssv1784877,nssv1784917,nssv1784873,nssv1784852,nssv1784902,nssv1784858,nssv1784876,nssv1784844,nssv1784929,nssv1784861,nssv1784867,nssv1784857,nssv1784889,nssv1784868,nssv1784897,nssv1784866,nssv1784926,nssv1784840,nssv1784904,nssv1784851,nssv1784870,nssv1784842,nssv1784887,nssv1784916,nssv1784881,nssv1784914,nssv1784878,nssv1784915,nssv1784896,nssv1784845,nssv1784880,nssv1784920,nssv1784894,nssv1784847,nssv1784901,nssv1784853,nssv1784927,nssv1784855,nssv1784911,nssv1784928,nssv1784837,nssv1784874,nssv1784933,nssv1784909,nssv1784864,nssv1784888,nssv1784925,nssv1784869,nssv1784910,nssv1784912,nssv1784882,nssv1784930,nssv1784931,nssv1784863,nssv1784913,nssv1784886,nssv1784893,nssv1784903,nssv1784895,nssv1784892,nssv1784924,nssv1784899 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv824298 1 116538060 116539104 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434189 M 31 0 1 "" NA18570 esv2764183 1 116631820 116635628 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006191,essv7006198,essv7006201,essv7006195,essv7006199,essv7006192,essv7006202,essv7006197,essv7006196,essv7006193,essv7006194 M 1109 0 11 "" RW_0010,RW_0012,RW_0068,RW_0080,RW_0118,RW_0123,RW_0147,RW_0252,RW_0254,RW_0279,RW_0543 nsv476097 1 116638418 116638418 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014897 M 9 1 0 "" NA12878 nsv2533 1 116711920 116746675 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4529 M 9 1 0 ATP1A1,ATP1A1OS NA12878 nsv2544 1 116769049 116800531 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7471,nssv9577 M 9 2 0 "" NA12156,NA18507 esv2599033 1 116779872 116782183 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5317602 M 1 0 1 "" NA18507 esv1442169 1 116781143 116781143 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3690182 M 2 1 0 "" HuRef esv1547911 1 116781171 116781171 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3776647 M 2 1 0 "" HuRef esv3328147 1 116785073 116785092 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596190,essv9596179 M 185 2 0 "" NA12814,NA12874 esv3303720 1 116785082 116785083 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7817791,essv7795661,essv7806910,essv7797437,essv7789787,essv7825171,essv7817393,essv7830074,essv7792071,essv7799632,essv7816808,essv7815885,essv7836636,essv7818281,essv7826167,essv7804118,essv7792997,essv7832677,essv7833748,essv7825425,essv7771604,essv7830869,essv7775048,essv7795205,essv7777758,essv7806091 M 185 26 0 "" NA11919,NA11992,NA12814,NA12874,NA18489,NA18498,NA18502,NA18508,NA18510,NA18517,NA18519,NA18523,NA18562,NA18856,NA18861,NA18909,NA18942,NA18964,NA19102,NA19114,NA19129,NA19147,NA19190,NA19225,NA19239,NA19257 esv3406704 1 116785083 116785091 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901204,essv8901185,essv8901186,essv8901191,essv8901194,essv8901199,essv8901205,essv8901198,essv8901183,essv8901196,essv8901193,essv8901180,essv8901189,essv8901190,essv8901202,essv8901195,essv8901201,essv8901200,essv8901184,essv8901187,essv8901188,essv8901197,essv8901182 M 185 23 0 "" NA11919,NA11992,NA18489,NA18498,NA18502,NA18508,NA18510,NA18517,NA18519,NA18523,NA18562,NA18856,NA18861,NA18909,NA18942,NA18964,NA19102,NA19114,NA19129,NA19147,NA19190,NA19225,NA19257 esv3419041 1 116785093 116785103 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673759 M 185 1 0 "" NA19239 esv3307961 1 116785094 116785095 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838876,essv7838276,essv7837916 M 185 3 0 "" NA12891,NA12892,NA19238 nsv476600 1 116785803 116785803 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019486 M 9 1 0 "" NA12878 esv274933 1 116794680 116796213 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585730,essv2585779 M 1250 1 1 "" esv2160373 1 116803486 116803996 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4694782 M 1 0 1 "" NA18507 esv2512482 1 116879168 116880644 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5227705 M 1 0 1 CD58 NA18507 esv7455 1 116879442 116880281 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29896 M 1 0 0 CD58 esv2209199 1 116879514 116880206 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4668621 M 1 0 1 CD58 NA18507 esv3433 1 116879647 116880162 CNV loss Wang_et_al_2008 18987735 Sequencing essv25874 M 1 0 1 CD58 YH esv3434570 1 116892792 116892826 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901207,essv8901206 M 185 2 0 CD58 NA07051,NA12249 esv3303707 1 116892795 116892796 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7762978,essv7742601 M 185 2 0 CD58 NA07051,NA12249 esv1003883 1 116914159 116917682 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565008 M 3 0 1 CD58 HuRef nsv482103 1 116918554 117011837 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558464 M 1 1 0 IGSF3 KB1 nsv831148 1 116927827 117128034 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448851,nssv1448950,nssv1448928,nssv1448939,nssv1448906,nssv1448862,nssv1448839,nssv1448895,nssv1448917,nssv1448884,nssv1448873 M 95 11 0 C1orf137,CD2,IGSF3,MIR320B1 esv28283 1 116931478 117006700 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15338,esv11342,esv19258 M 40 22 1 IGSF3 NA06985,NA11894,NA11993,NA11995,NA12004,NA12006,NA12044,NA12287,NA12828,NA12878,NA18508,NA18517,NA18523,NA18858,NA18861,NA18909,NA18916,NA19099,NA19114,NA19129,NA19147,NA19190,NA19225 nsv824309 1 116931478 117008345 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437960,nssv1423664,nssv1437774,nssv1433438,nssv1431095,nssv1429579,nssv1440830,nssv1428044,nssv1421470,nssv1424761,nssv1434190,nssv1423140,nssv1436355,nssv1438601,nssv1440142,nssv1428839,nssv1430365,nssv1426408 M 31 18 0 IGSF3 AK10,AK12,AK14,AK16,AK18,AK2,AK6,NA18526,NA18542,NA18547,NA18564,NA18570,NA18951,NA18968,NA18969,NA18973,NA18997,NA18999 nsv946165 1 116933313 116971785 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784938,nssv1783248,nssv1784946,nssv1783214,nssv1784941,nssv1783245,nssv1783198,nssv1783222,nssv1783258,nssv1783218,nssv1783213,nssv1783253,nssv1784940,nssv1783251,nssv1784944,nssv1783249,nssv1783261,nssv1783220,nssv1784935,nssv1783237,nssv1784936,nssv1783210,nssv1783212,nssv1783244,nssv1783204,nssv1783243,nssv1783254,nssv1783241,nssv1783215,nssv1783235,nssv1784943,nssv1783233,nssv1783200,nssv1783246,nssv1783206,nssv1784934,nssv1783197,nssv1783240,nssv1783256,nssv1783219,nssv1783208,nssv1783223,nssv1783255,nssv1783230,nssv1783209,nssv1783242,nssv1784939,nssv1783229,nssv1783263,nssv1783234,nssv1783259,nssv1783238,nssv1783203,nssv1783231,nssv1783260,nssv1783224,nssv1784942,nssv1783247,nssv1784945,nssv1783225,nssv1783201,nssv1783226,nssv1783205,nssv1783217,nssv1783199,nssv1783207,nssv1783257,nssv1783232,nssv1783202,nssv1783239,nssv1783262,nssv1783252,nssv1784937,nssv1783250,nssv1783221,nssv1783211,nssv1783216,nssv1783236,nssv1783228,nssv1783227 M 97 10 0 IGSF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv10661 1 116958653 117005673 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv16759,nssv17073,nssv16437,nssv23060,nssv17078,nssv18075,nssv24000,nssv22094,nssv16421,nssv17076,nssv19431 M 31 7 4 IGSF3 NA07048,NA10839,NA10863,NA12155,NA12872,NA18517,NA18537,NA18572,NA18860,NA18972,NA19132 esv2758963 1 116966438 117076198 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757748 M 270 40 16 C1orf137,IGSF3,MIR320B1 NA06985,NA06993,NA07000,NA07029,NA07048,NA07055,NA07357,NA10831,NA10839,NA10855,NA11832,NA11840,NA12707,NA12751,NA12752,NA12761,NA12762,NA12812,NA12813,NA12864,NA12872,NA12874,NA12875,NA18506,NA18508,NA18517,NA18537,NA18545,NA18547,NA18550,NA18555,NA18605,NA18635,NA18856,NA18858,NA18860,NA18871,NA18872,NA18943,NA18945,NA18960,NA18976,NA19098,NA19101,NA19127,NA19129,NA19131,NA19132,NA19140,NA19159,NA19161,NA19202,NA19204,NA19205,NA19206,NA19239 nsv428190 1 116966438 117076198 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450964,nssv450975,nssv450997,nssv450953,nssv451008,nssv450986 M 62 6 0 C1orf137,IGSF3,MIR320B1 HGDP01086,HGDP01087,HGDP01088,HGDP01094,NA19147,NA19181 esv33190 1 116970419 117005075 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94250,essv96164,essv95367,essv99589,essv100948,essv94325,essv93479 M 51 6 1 IGSF3 21693,21808,21872,22007,22128,22217,22394 nsv946166 1 116971785 116972381 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783276,nssv1783302,nssv1783279,nssv1783311,nssv1783278,nssv1783330,nssv1783292,nssv1783318,nssv1783293,nssv1783315,nssv1783347,nssv1783340,nssv1783289,nssv1783359,nssv1783342,nssv1783298,nssv1783274,nssv1783332,nssv1783268,nssv1783323,nssv1783283,nssv1783317,nssv1783267,nssv1783308,nssv1783284,nssv1783358,nssv1783273,nssv1783337,nssv1783343,nssv1783294,nssv1783280,nssv1783313,nssv1783288,nssv1783264,nssv1783286,nssv1783333,nssv1783269,nssv1783360,nssv1783350,nssv1783354,nssv1783265,nssv1783329,nssv1783266,nssv1783352,nssv1783346,nssv1783303,nssv1783295,nssv1783328,nssv1783272,nssv1783353,nssv1783349,nssv1783300,nssv1783345,nssv1783307,nssv1783285,nssv1783339,nssv1783348,nssv1783355,nssv1783341,nssv1783357,nssv1783270,nssv1783299,nssv1783277,nssv1783331,nssv1783271,nssv1783310,nssv1783281,nssv1783309,nssv1783344,nssv1783335,nssv1783275,nssv1783304,nssv1783282,nssv1783334,nssv1783351,nssv1783324,nssv1783326,nssv1783306,nssv1783314,nssv1783296,nssv1783321,nssv1783336,nssv1783338,nssv1783356,nssv1783327,nssv1783312,nssv1783305,nssv1783287,nssv1783320,nssv1783297,nssv1783316,nssv1783290,nssv1783319,nssv1783322,nssv1783301,nssv1783291,nssv1783325 M 97 10 0 IGSF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946167 1 116972381 116986474 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783377,nssv1783427,nssv1783372,nssv1783413,nssv1783375,nssv1783406,nssv1783376,nssv1783420,nssv1783367,nssv1783393,nssv1783438,nssv1783388,nssv1783439,nssv1783404,nssv1783362,nssv1783409,nssv1783383,nssv1783391,nssv1783440,nssv1783412,nssv1783432,nssv1783429,nssv1783373,nssv1783416,nssv1783381,nssv1783403,nssv1783370,nssv1783405,nssv1783380,nssv1783430,nssv1783436,nssv1783418,nssv1783363,nssv1783425,nssv1783390,nssv1783426,nssv1783366,nssv1783410,nssv1783385,nssv1783361,nssv1783365,nssv1783384,nssv1783369,nssv1783422,nssv1783382,nssv1783423,nssv1783389,nssv1783398,nssv1783434,nssv1783407,nssv1783437,nssv1783395,nssv1783371,nssv1783400,nssv1783368,nssv1783421,nssv1783374,nssv1783408,nssv1783378,nssv1783428,nssv1783435,nssv1783396,nssv1783392,nssv1783401,nssv1783379,nssv1783399,nssv1783433,nssv1783419,nssv1783431,nssv1783417,nssv1783364,nssv1783415,nssv1783386,nssv1783387,nssv1783402,nssv1783411,nssv1783414,nssv1783394,nssv1783397,nssv1783424 M 97 10 0 IGSF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946168 1 116986974 117006686 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783450,nssv1783472,nssv1783448,nssv1783481,nssv1783447,nssv1783471,nssv1783443,nssv1783456,nssv1783444,nssv1783445,nssv1783451,nssv1783452,nssv1783482,nssv1783442,nssv1783458,nssv1783475,nssv1783441,nssv1783457,nssv1783485,nssv1783465,nssv1783484,nssv1783477,nssv1783483,nssv1783480,nssv1783473,nssv1783467,nssv1783478,nssv1783461,nssv1783463,nssv1783459,nssv1783449,nssv1783474,nssv1783488,nssv1783446,nssv1783455,nssv1783453,nssv1783462,nssv1783454,nssv1783486,nssv1783464,nssv1783487,nssv1783470,nssv1783468,nssv1783460,nssv1783469,nssv1783479,nssv1783466,nssv1783476 M 97 10 0 IGSF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945587 1 116992842 117000025 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571952,nssv2571948,nssv2571950,nssv2571944,nssv2571946,nssv2571951,nssv2571945,nssv2571949,nssv2571947,nssv2571943,nssv2571942 M 97 10 0 IGSF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945588 1 117001870 117003637 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571955,nssv2571961,nssv2571959,nssv2571956,nssv2571960,nssv2571957,nssv2571962,nssv2571958,nssv2571963,nssv2571954,nssv2571953 M 97 10 0 IGSF3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv32882 1 117008200 117008585 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv100881 M 51 1 0 IGSF3 21656 nsv472357 1 117030134 117030134 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011415 M 9 1 0 "" NA18555 nsv473513 1 117045560 117045560 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015938 M 9 1 0 C1orf137 NA19129 nsv946170 1 117057801 117061896 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1783490,nssv1784479,nssv1784499,nssv1784480,nssv1784493,nssv1784484,nssv1784417,nssv1784482,nssv1784432,nssv1784451,nssv1784495,nssv1784449,nssv1784494,nssv1784457,nssv1784416,nssv1784505,nssv1784419,nssv1784489,nssv1784423,nssv1784443,nssv1784496,nssv1784440,nssv1784422,nssv1784461,nssv1784427,nssv1784487,nssv1784433,nssv1784464,nssv1784492,nssv1784460,nssv1784491,nssv1784447,nssv1783491,nssv1784446,nssv1784437,nssv1784502,nssv1784442,nssv1784486,nssv1784424,nssv1784473,nssv1784429,nssv1784458,nssv1784418,nssv1784452,nssv1784435,nssv1784468,nssv1784426,nssv1784477,nssv1784421,nssv1784453,nssv1784497,nssv1784436,nssv1784438,nssv1784507,nssv1784430,nssv1784467,nssv1784441,nssv1784476,nssv1784498,nssv1784455,nssv1784490,nssv1784474,nssv1784425,nssv1784466,nssv1784444,nssv1784485,nssv1784431,nssv1784463,nssv1784420,nssv1784450,nssv1784428,nssv1784508,nssv1784434,nssv1784501,nssv1784459,nssv1784439,nssv1784456,nssv1783489,nssv1784481,nssv1784475,nssv1784454,nssv1784504,nssv1784471,nssv1784462,nssv1784472,nssv1784470,nssv1784448,nssv1784506,nssv1784478,nssv1784488,nssv1784503,nssv1784465,nssv1784445,nssv1784469,nssv1784500,nssv1784483,nssv1784509 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2555 1 117071656 117102963 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10985 M 9 1 0 CD2 NA15510 esv3412740 1 117123924 117123943 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678329 M 185 1 0 "" NA19240 esv3309799 1 117123933 117123934 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839128 M 185 1 0 "" NA19240 nsv473372 1 117180209 117180209 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017856 M 9 1 0 "" NA19129 nsv831159 1 117188850 117385135 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448962,nssv1448973 M 95 0 2 CD101,PTGFRN nsv2566 1 117215569 117260677 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7478 M 9 0 1 PTGFRN NA12156 nsv547586 1 117241586 117274226 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722864 M 17421 0 1 PTGFRN nsv519074 1 117265238 117267427 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696546 M 2026 0 1 PTGFRN nsv517575 1 117345854 117346225 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv690363,nssv672610,nssv652415 M 2026 0 3 CD101 nsv1009706 1 117393517 117786299 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487531 M 29084 1 0 MAN1A2,MIR942,TRIM45,TTF2,VTCN1 nsv518833 1 117399424 117403600 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694278 M 2026 0 1 "" nsv946171 1 117482484 117483486 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784535,nssv1784605,nssv1784591,nssv1784542,nssv1784527,nssv1784579,nssv1784521,nssv1784561,nssv1784523,nssv1784571,nssv1784596,nssv1784583,nssv1784587,nssv1784556,nssv1784515,nssv1784582,nssv1784520,nssv1784540,nssv1784529,nssv1784537,nssv1784511,nssv1784601,nssv1784517,nssv1784598,nssv1784590,nssv1784564,nssv1784592,nssv1784554,nssv1784516,nssv1784567,nssv1784514,nssv1784548,nssv1784518,nssv1784575,nssv1784539,nssv1784603,nssv1784532,nssv1784584,nssv1784519,nssv1784573,nssv1784594,nssv1784597,nssv1784530,nssv1784581,nssv1784522,nssv1784560,nssv1784524,nssv1784600,nssv1784541,nssv1784563,nssv1784512,nssv1784510,nssv1784534,nssv1784602,nssv1784588,nssv1784566,nssv1784526,nssv1784565,nssv1784595,nssv1784544,nssv1784525,nssv1784572,nssv1784593,nssv1784568,nssv1784513,nssv1784545,nssv1784531,nssv1784578,nssv1784528,nssv1784555,nssv1784538,nssv1784533,nssv1784589,nssv1784577,nssv1784604,nssv1784558,nssv1784547,nssv1784559,nssv1784586,nssv1784570,nssv1784599,nssv1784585,nssv1784536,nssv1784569,nssv1784606,nssv1784553,nssv1784557,nssv1784552,nssv1784580,nssv1784551,nssv1784574,nssv1784576,nssv1784562,nssv1784550,nssv1784546,nssv1784549,nssv1784543 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474406 1 117486699 117486699 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014839 M 9 1 0 "" NA18956 nsv1007386 1 117506682 117523703 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492663 M 29084 0 1 VTCN1 nsv477657 1 117570198 117570198 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014338 M 9 1 0 "" NA18517 nsv2577 1 117577428 117609986 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5807 M 9 1 0 "" NA19129 nsv521455 1 117633695 117645774 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698066 M 2026 1 0 "" nsv547587 1 117675383 117682803 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722865 M 17421 0 1 "" dgv520n54 1 117680589 117683153 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547588,nsv547590,nsv547589 M 17421 0 6 "" nsv819174 1 117682003 117683406 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419255 M 2 1 0 "" AK1 nsv824320 1 117682118 117683127 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433439,nssv1424237,nssv1434191,nssv1434881,nssv1435673 M 31 5 0 "" NA18526,NA18566,NA18570,NA18942,NA18947 nsv821203 1 117682118 117683546 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420558 M 1 0 1 "" NA10851 esv28950 1 117682243 117683418 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19672,esv10519 M 40 12 0 "" NA11931,NA11993,NA11995,NA12006,NA12878,NA15510,NA18517,NA18858,NA18907,NA18909,NA18916,NA19129 nsv547591 1 117682271 117682855 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv722875,nssv722874,nssv722872,nssv722873 M 17421 0 4 "" dgv521n54 1 117682271 117683153 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547599,nsv547593,nsv547606,nsv547592,nsv547603,nsv547598 M 17421 0 107 "" dgv522n54 1 117682271 117683312 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547601,nsv547608,nsv547607,nsv547600,nsv547605,nsv547602,nsv547594,nsv547597,nsv547596,nsv547595,nsv547604 M 17421 0 19 "" dgv523n54 1 117682542 117683312 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547609,nsv547610 M 17421 0 2 "" esv1005427 1 117730543 117737162 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565039 M 3 0 1 MAN1A2 HuRef dgv294n100 1 117740264 117878050 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001557,nsv1000100,nsv999199 M 29084 0 3 MAN1A2 esv2224574 1 117753389 117753800 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4518991 M 1 0 1 MAN1A2 NA18507 nsv831170 1 117780953 117951577 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448984 M 95 1 0 FAM46C,MAN1A2 nsv519780 1 117781355 117831124 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv658550,nssv660982 M 2026 2 0 MAN1A2 dgv295n100 1 117782278 117870948 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003905,nsv1000683,nsv1005179,nsv1003281,nsv1000625,nsv1001286,nsv1007469 M 29084 0 10 MAN1A2 nsv819679 1 117811591 117815812 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419615 M 2 0 1 MAN1A2 AK1 nsv506956 1 117813695 117819695 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619249,nssv617539,nssv623284 M 4 0 0 MAN1A2 CHM,NA10860,NA18994 nsv1006415 1 117814725 117861565 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486920 M 29084 0 1 MAN1A2 dgv296n100 1 117833680 117878050 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011470,nsv1008973,nsv1013425,nsv1011296,nsv1013249 M 29084 0 9 MAN1A2 nsv1001257 1 117844280 117870948 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499448,nssv3484744,nssv3497984,nssv3488965 M 29084 0 4 MAN1A2 esv23226 1 117871295 117877347 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9955 M 40 0 1 "" NA18909 esv8011 1 117892419 117892975 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30452 M 1 0 0 "" esv5132 1 117892543 117892846 CNV loss Wang_et_al_2008 18987735 Sequencing essv27573 M 1 0 1 "" YH esv993315 1 117892570 117892787 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581163 M 3 0 1 "" HuRef esv1327947 1 117892574 117892796 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3973539 M 2 0 1 "" HuRef nsv518885 1 117920159 117923157 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696344 M 2026 0 1 "" nsv1007736 1 117958787 117975745 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702058 M 29084 1 0 FAM46C nsv819506 1 117968996 117970228 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419207 M 2 1 0 FAM46C AK1 nsv526227 1 118079046 118085413 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702493 M 2026 1 0 "" nsv547611 1 118156624 118305788 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723004 M 17421 0 1 GDAP2,SPAG17,WDR3 esv3354817 1 118181175 118181200 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901211,essv8901210,essv8901209,essv8901212,essv8901208 M 185 5 0 "" NA07037,NA12249,NA18545,NA18547,NA18552 esv3306656 1 118181190 118181191 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7794253,essv7787704,essv7793402,essv7803191,essv7791146 M 185 5 0 "" NA07037,NA12249,NA18545,NA18547,NA18552 esv3349759 1 118181201 118181220 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596201 M 185 1 0 "" NA12249 nsv528470 1 118222632 118300577 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705073 M 2026 0 1 GDAP2,SPAG17,WDR3 esv34191 1 118228296 118547581 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990652 M 270 0 0 GDAP2,SPAG17,WDR3 esv2641236 1 118246176 118247492 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5190360 M 1 0 1 GDAP2 NA18507 esv2608205 1 118441000 118442385 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5207238 M 1 0 1 SPAG17 NA18507 esv5742 1 118454808 118454977 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28183 M 1 0 0 SPAG17 nsv547612 1 118521479 118598327 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723005 M 17421 0 1 SPAG17 esv1542324 1 118663037 118663037 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4285551 M 2 1 0 "" HuRef esv1367208 1 118663501 118663501 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3905395 M 2 1 0 "" HuRef nsv523041 1 118671456 118680179 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698724 M 2026 0 1 "" nsv479750 1 118700476 118700476 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015554 M 9 0 0 "" nsv2588 1 118721481 118726986 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3053 M 9 1 0 "" NA18555 nsv509446 1 118730977 118738052 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619812,nssv623792,nssv621101 M 4 3 0 "" NA10860,NA15510,NA18994 esv2493040 1 118731074 118733413 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5277847 M 1 0 1 "" NA18507 esv1381703 1 118731561 118731561 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4314009 M 2 1 0 "" HuRef esv3377316 1 118733130 118733289 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652038 M 185 1 0 "" NA19240 esv1486473 1 118733253 118733253 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3678501 M 2 1 0 "" HuRef esv994128 1 118733253 118733253 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563460 M 3 1 0 "" HuRef esv1771959 1 118745615 118745673 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3674742 M 2 0 1 "" HuRef nsv478615 1 118771552 118771552 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018950 M 9 1 0 "" NA18507 dgv297n100 1 118775147 118850186 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001757,nsv1004804 M 29084 2 0 "" nsv525369 1 118789411 118794484 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701489 M 2026 0 1 "" esv21930 1 118791325 118791888 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19348 M 40 0 2 "" NA18523,NA18858 nsv1013186 1 118807006 118850186 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496934 M 29084 1 0 "" nsv547613 1 118843766 118904362 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723006 M 17421 0 1 "" nsv1001577 1 118869780 118912248 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702059 M 29084 0 1 "" nsv476614 1 118870499 118870499 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016475 M 9 1 0 "" NA12878 nsv547614 1 118875742 118908459 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723007 M 17421 0 1 "" nsv506957 1 118926444 118932444 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617540 M 4 0 0 "" CHM nsv946172 1 118950416 118959449 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784622,nssv1784151,nssv1784629,nssv1784185,nssv1784624,nssv1784126,nssv1784620,nssv1784124,nssv1784169,nssv1784142,nssv1784174,nssv1784161,nssv1784166,nssv1784123,nssv1784613,nssv1784184,nssv1784609,nssv1784163,nssv1784612,nssv1784153,nssv1784626,nssv1784177,nssv1784608,nssv1784154,nssv1784619,nssv1784158,nssv1784120,nssv1784133,nssv1784173,nssv1784157,nssv1784632,nssv1784160,nssv1784171,nssv1784630,nssv1784625,nssv1784156,nssv1784616,nssv1784144,nssv1784627,nssv1784121,nssv1784628,nssv1784150,nssv1784631,nssv1784128,nssv1784621,nssv1784134,nssv1784636,nssv1784122,nssv1784610,nssv1784634,nssv1784617,nssv1784159,nssv1784167,nssv1784176,nssv1784175,nssv1784119,nssv1784615,nssv1784135,nssv1784611,nssv1784147,nssv1784172,nssv1784180,nssv1784623,nssv1784155,nssv1784618,nssv1784131,nssv1784168,nssv1784132,nssv1784614,nssv1784145,nssv1784170,nssv1784165,nssv1784635,nssv1784130,nssv1784146,nssv1784183,nssv1784162,nssv1784607,nssv1784136,nssv1784149,nssv1784182,nssv1784138,nssv1784125,nssv1784179,nssv1784140,nssv1784143,nssv1784129,nssv1784633,nssv1784139,nssv1784137,nssv1784178,nssv1784181,nssv1784141,nssv1784148,nssv1784152,nssv1784164,nssv1784127 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv298n100 1 118997128 119022019 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009731,nsv997474,nsv1001997 M 29084 0 7 "" nsv997707 1 119001091 119397472 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485479 M 29084 1 0 TBX15,WARS2 esv2750799 1 119030780 119183750 CNV gain Pinto_et_al_2007 17911159 SNP array essv6981003,essv6981001,essv6981002 M 771 3 0 "" BEC_336 nsv519487 1 119091517 119092905 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696878 M 2026 1 0 "" esv1123110 1 119128531 119128583 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4251508 M 2 0 1 "" HuRef nsv831181 1 119141698 119330870 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448995 M 95 1 0 TBX15 nsv528214 1 119182451 119185341 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704775 M 2026 1 0 "" nsv475776 1 119184127 119184127 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015784 M 9 1 0 "" NA12878 nsv524681 1 119235041 121013322 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700652 M 2026 1 0 ADAM30,EMBP1,FAM72B,FCGR1B,HAO2,HIST2H2BA,HMGCS2,HSD3B1,HSD3B2,HSD3BP4,LINC00622,NBPF7,NOTCH2,PHGDH,REG4,SRGAP2-AS1,SRGAP2D,TBX15,WARS2,ZNF697 nsv160473 1 119237609 119237688 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179051 M 24 TBX15 nsv506958 1 119237720 119243720 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619250 M 4 0 0 TBX15 NA10860 esv25417 1 119284005 119285149 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13911 M 40 0 2 TBX15 NA18508,NA18861 esv3345720 1 119354865 119354884 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596301,essv9596312 M 185 2 0 "" NA12249,NA12873 esv3306756 1 119354867 119354868 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7830987,essv7827038,essv7828809,essv7796024,essv7781700,essv7770115,essv7822719,essv7807971,essv7810938,essv7820177,essv7773383,essv7791027,essv7823613,essv7795020,essv7785671,essv7775823,essv7810067,essv7792752,essv7783622,essv7823992,essv7827148,essv7801072,essv7822049,essv7833614,essv7787948,essv7829418,essv7795687,essv7772916,essv7802926,essv7807437,essv7771848,essv7787222,essv7777147,essv7815314,essv7789047,essv7782512,essv7772578,essv7774758,essv7776105,essv7794420,essv7820884,essv7780672,essv7803697,essv7819742,essv7784964 M 185 45 0 "" NA07037,NA07357,NA11829,NA11894,NA11918,NA11919,NA11920,NA12044,NA12144,NA12249,NA12717,NA12814,NA12828,NA12873,NA18537,NA18542,NA18545,NA18547,NA18550,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18570,NA18571,NA18576,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18609,NA18943,NA18944,NA18947,NA18948,NA18949,NA18951,NA18956,NA18960,NA18961,NA18973 esv3322937 1 119354884 119354893 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901305,essv8901297,essv8901280,essv8901277,essv8901267,essv8901268,essv8901273,essv8901271,essv8901282,essv8901304,essv8901298,essv8901285,essv8901306,essv8901279,essv8901309,essv8901287,essv8901272,essv8901286,essv8901278,essv8901307,essv8901293,essv8901290,essv8901276,essv8901284,essv8901283,essv8901299,essv8901308,essv8901291,essv8901295,essv8901275,essv8901312,essv8901269,essv8901274,essv8901311,essv8901289,essv8901301,essv8901266,essv8901296,essv8901310,essv8901288,essv8901302,essv8901294,essv8901300 M 185 43 0 "" NA07037,NA07357,NA11829,NA11894,NA11918,NA11919,NA11920,NA12044,NA12144,NA12249,NA12717,NA12828,NA18537,NA18542,NA18545,NA18547,NA18550,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18570,NA18571,NA18576,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18609,NA18943,NA18944,NA18947,NA18948,NA18949,NA18951,NA18956,NA18960,NA18961,NA18973 esv3398007 1 119357079 119357092 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863750 M 185 1 0 "" NA12005 esv6867 1 119360036 119360815 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29308 M 1 0 0 "" esv5253 1 119360214 119360883 CNV loss Wang_et_al_2008 18987735 Sequencing essv27694 M 1 0 1 "" YH dgv16n21 1 119383423 119390866 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv517011,nsv517843 M 2026 0 3 WARS2 esv2475310 1 119389534 119391041 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5253587 M 1 0 1 WARS2 NA18507 nsv521813 1 119390866 119420971 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694585 M 2026 0 1 WARS2 nsv946173 1 119429180 119430549 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784188,nssv1784247,nssv1784267,nssv1784243,nssv1784266,nssv1784261,nssv1784196,nssv1784228,nssv1784187,nssv1784221,nssv1784270,nssv1784226,nssv1784195,nssv1784252,nssv1784263,nssv1784253,nssv1784211,nssv1784213,nssv1784199,nssv1784239,nssv1784272,nssv1784251,nssv1784271,nssv1784273,nssv1784200,nssv1784276,nssv1784198,nssv1784233,nssv1784201,nssv1784249,nssv1784197,nssv1784282,nssv1784206,nssv1784240,nssv1784210,nssv1784241,nssv1784193,nssv1784277,nssv1784217,nssv1784235,nssv1784202,nssv1784234,nssv1784191,nssv1784246,nssv1784215,nssv1784212,nssv1784192,nssv1784232,nssv1784264,nssv1784280,nssv1784189,nssv1784262,nssv1784194,nssv1784209,nssv1784214,nssv1784278,nssv1784205,nssv1784259,nssv1784269,nssv1784255,nssv1784265,nssv1784219,nssv1784203,nssv1784256,nssv1784207,nssv1784245,nssv1784204,nssv1784225,nssv1784190,nssv1784274,nssv1784208,nssv1784281,nssv1784268,nssv1784218,nssv1784229,nssv1784230,nssv1784220,nssv1784258,nssv1784260,nssv1784224,nssv1784275,nssv1784279,nssv1784244,nssv1784248,nssv1784231,nssv1784216,nssv1784257,nssv1784222,nssv1784242,nssv1784236,nssv1784223,nssv1784238,nssv1784250,nssv1784237,nssv1784254,nssv1784227,nssv1784186 M 97 10 0 WARS2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946174 1 119460307 119472024 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784287,nssv1784333,nssv1784290,nssv1784309,nssv1784284,nssv1784323,nssv1784361,nssv1784346,nssv1784302,nssv1784374,nssv1784360,nssv1784316,nssv1784285,nssv1784328,nssv1784364,nssv1784342,nssv1784308,nssv1784329,nssv1784367,nssv1784378,nssv1784295,nssv1784306,nssv1784296,nssv1784318,nssv1784297,nssv1784358,nssv1784303,nssv1784319,nssv1784366,nssv1784325,nssv1784365,nssv1784352,nssv1784307,nssv1784359,nssv1784293,nssv1784355,nssv1784312,nssv1784347,nssv1784305,nssv1784341,nssv1784286,nssv1784351,nssv1784288,nssv1784370,nssv1784299,nssv1784379,nssv1784369,nssv1784324,nssv1784298,nssv1784350,nssv1784314,nssv1784338,nssv1784289,nssv1784353,nssv1784291,nssv1784339,nssv1784311,nssv1784330,nssv1784368,nssv1784337,nssv1784294,nssv1784349,nssv1784300,nssv1784336,nssv1784292,nssv1784340,nssv1784301,nssv1784315,nssv1784304,nssv1784348,nssv1784362,nssv1784372,nssv1784363,nssv1784357,nssv1784356,nssv1784373,nssv1784343,nssv1784326,nssv1784321,nssv1784377,nssv1784375,nssv1784332,nssv1784376,nssv1784283,nssv1784334,nssv1784335,nssv1784344,nssv1784322,nssv1784310,nssv1784317,nssv1784345,nssv1784371,nssv1784354,nssv1784327,nssv1784331,nssv1784313,nssv1784320 M 97 10 0 WARS2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831192 1 119472695 119644749 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449006 M 95 1 0 WARS2 nsv1012814 1 119522122 119566513 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493057 M 29084 0 1 "" esv34089 1 119553635 119874484 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990631 M 270 0 0 HAO2,HSD3B1,HSD3B2 nsv946175 1 119563559 119564059 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784400,nssv1785916,nssv1784386,nssv1785957,nssv1784390,nssv1785939,nssv1785949,nssv1785923,nssv1785947,nssv1785928,nssv1785952,nssv1785938,nssv1784381,nssv1785908,nssv1784408,nssv1785911,nssv1784394,nssv1784414,nssv1784383,nssv1785966,nssv1784402,nssv1784413,nssv1785954,nssv1784407,nssv1784411,nssv1784403,nssv1784398,nssv1784412,nssv1784389,nssv1785927,nssv1785953,nssv1785926,nssv1784393,nssv1785934,nssv1785956,nssv1785940,nssv1784404,nssv1785965,nssv1785948,nssv1785941,nssv1785955,nssv1785925,nssv1784385,nssv1785915,nssv1784387,nssv1785964,nssv1784396,nssv1785961,nssv1785951,nssv1785932,nssv1784409,nssv1785919,nssv1784391,nssv1785935,nssv1784401,nssv1785946,nssv1784388,nssv1785929,nssv1784382,nssv1785914,nssv1784392,nssv1785931,nssv1784405,nssv1785960,nssv1784399,nssv1785959,nssv1785950,nssv1785907,nssv1784397,nssv1785922,nssv1784395,nssv1785945,nssv1784384,nssv1785962,nssv1785936,nssv1784415,nssv1785930,nssv1784406,nssv1785918,nssv1784380,nssv1785921,nssv1785917,nssv1785943,nssv1785958,nssv1785912,nssv1785920,nssv1785963,nssv1785913,nssv1785924,nssv1785937,nssv1785933,nssv1785944,nssv1784410,nssv1785906,nssv1785909,nssv1785910,nssv1785942 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv159961 1 119608879 119608934 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178539 M 24 "" nsv547615 1 119630065 119677253 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723008 M 17421 1 0 "" esv2761649 1 119642168 119727459 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6995567 M 1109 1 0 HAO2 SW_1384 nsv1004662 1 119648970 119956321 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488645 M 29084 1 0 HAO2,HSD3B1,HSD3B2,HSD3BP4,LINC00622 esv1007303 1 119678163 119678269 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565805 M 3 1 0 "" HuRef esv2763647 1 119730965 119956321 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6995578,essv6995600,essv6995589 M 1109 2 1 HAO2,HSD3B1,HSD3B2,HSD3BP4,LINC00622 SW_1148,SW_1301,SW_1384 esv1759268 1 119733314 119733314 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3862461 M 2 1 0 HAO2 HuRef nsv2599 1 119736546 119769271 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4648 M 9 0 1 HAO2,HSD3B2 NA19129 nsv946176 1 119761550 119790600 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786044,nssv1786038,nssv1785979,nssv1786062,nssv1786046,nssv1786026,nssv1785982,nssv1786020,nssv1785981,nssv1786011,nssv1785971,nssv1786041,nssv1785987,nssv1786009,nssv1785977,nssv1786010,nssv1785995,nssv1786033,nssv1786049,nssv1786019,nssv1785973,nssv1786043,nssv1785985,nssv1786035,nssv1785978,nssv1786032,nssv1785998,nssv1786002,nssv1785988,nssv1786012,nssv1786052,nssv1786057,nssv1785980,nssv1786008,nssv1785986,nssv1786037,nssv1785984,nssv1786003,nssv1785974,nssv1786029,nssv1785968,nssv1786013,nssv1786053,nssv1785967,nssv1786048,nssv1785994,nssv1785970,nssv1786061,nssv1785976,nssv1786039,nssv1786047,nssv1785993,nssv1786045,nssv1786022,nssv1785996,nssv1786001,nssv1785972,nssv1786060,nssv1786050,nssv1786040,nssv1785989,nssv1785997,nssv1785969,nssv1786059,nssv1785983,nssv1785999,nssv1785991,nssv1786004,nssv1785975,nssv1786027,nssv1785992,nssv1786025,nssv1786051,nssv1786034,nssv1786054,nssv1786006,nssv1785990,nssv1786005,nssv1786030,nssv1786023,nssv1786056,nssv1786042,nssv1786015,nssv1786036,nssv1786058,nssv1786021,nssv1786017,nssv1786018,nssv1786016,nssv1786007,nssv1786014,nssv1786024,nssv1786031,nssv1786000,nssv1786028,nssv1786055,nssv1786063 M 97 10 0 HSD3B2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv470733 1 119792952 119819678 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547763 M 443 0 1 "" HGDP00623 nsv946177 1 119793054 119806241 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786089,nssv1786118,nssv1786068,nssv1786121,nssv1784046,nssv1786109,nssv1784047,nssv1784036,nssv1786079,nssv1786064,nssv1786073,nssv1784031,nssv1784043,nssv1784040,nssv1786085,nssv1784028,nssv1784050,nssv1786102,nssv1786078,nssv1784059,nssv1786082,nssv1784053,nssv1786075,nssv1784058,nssv1786070,nssv1786105,nssv1786072,nssv1784032,nssv1786093,nssv1786097,nssv1786083,nssv1784060,nssv1786065,nssv1786103,nssv1786081,nssv1786098,nssv1786076,nssv1786116,nssv1786095,nssv1786112,nssv1786080,nssv1786090,nssv1786086,nssv1786115,nssv1786092,nssv1784057,nssv1784044,nssv1784038,nssv1786088,nssv1786122,nssv1786084,nssv1784055,nssv1786074,nssv1786119,nssv1784045,nssv1786096,nssv1786066,nssv1786120,nssv1786077,nssv1784033,nssv1784049,nssv1786124,nssv1786069,nssv1784037,nssv1784048,nssv1786117,nssv1786071,nssv1784054,nssv1786067,nssv1786123,nssv1784052,nssv1784042,nssv1784051,nssv1786113,nssv1786091,nssv1786125,nssv1786094,nssv1784061,nssv1784041,nssv1786108,nssv1784034,nssv1784029,nssv1786099,nssv1786114,nssv1784030,nssv1786107,nssv1784056,nssv1786087,nssv1786110,nssv1784039,nssv1786111,nssv1786100,nssv1786106,nssv1784062,nssv1784035,nssv1786104,nssv1786101 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv299n100 1 119800317 119838460 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013126,nsv1002204 M 29084 0 2 "" nsv946178 1 119806741 119808703 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785057,nssv1784102,nssv1784064,nssv1785035,nssv1784067,nssv1785038,nssv1785066,nssv1784104,nssv1784072,nssv1784103,nssv1784076,nssv1784105,nssv1784088,nssv1785037,nssv1784075,nssv1785051,nssv1784073,nssv1785041,nssv1784066,nssv1785042,nssv1784094,nssv1784097,nssv1784077,nssv1785048,nssv1785061,nssv1784098,nssv1784079,nssv1785033,nssv1785064,nssv1784106,nssv1785060,nssv1785039,nssv1784078,nssv1784100,nssv1785059,nssv1785043,nssv1784074,nssv1785046,nssv1784083,nssv1785032,nssv1784087,nssv1785034,nssv1784068,nssv1785049,nssv1784071,nssv1785045,nssv1785062,nssv1785056,nssv1784085,nssv1784095,nssv1784082,nssv1784101,nssv1784092,nssv1785050,nssv1784070,nssv1784093,nssv1784091,nssv1785047,nssv1785065,nssv1784089,nssv1784084,nssv1785054,nssv1784080,nssv1785053,nssv1785063,nssv1785052,nssv1784081,nssv1785055,nssv1785058,nssv1785040,nssv1784069,nssv1784099,nssv1784065,nssv1784107,nssv1784063,nssv1784090,nssv1785044,nssv1784096,nssv1784086,nssv1785036 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946179 1 119808703 119818174 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785092,nssv1785105,nssv1785076,nssv1785124,nssv1785071,nssv1785160,nssv1785088,nssv1785154,nssv1785084,nssv1785099,nssv1785095,nssv1785090,nssv1785069,nssv1785115,nssv1785077,nssv1785116,nssv1785098,nssv1785100,nssv1785153,nssv1785107,nssv1785087,nssv1785136,nssv1785080,nssv1785097,nssv1785068,nssv1785126,nssv1785152,nssv1785130,nssv1785149,nssv1785110,nssv1785151,nssv1785118,nssv1785074,nssv1785141,nssv1785148,nssv1785119,nssv1785146,nssv1785161,nssv1785086,nssv1785137,nssv1785082,nssv1785132,nssv1785147,nssv1785120,nssv1785073,nssv1785162,nssv1785070,nssv1785117,nssv1785072,nssv1785128,nssv1785145,nssv1785093,nssv1785081,nssv1785113,nssv1785091,nssv1785125,nssv1785144,nssv1785135,nssv1785078,nssv1785112,nssv1785079,nssv1785156,nssv1785075,nssv1785108,nssv1785150,nssv1785131,nssv1785083,nssv1785127,nssv1785089,nssv1785114,nssv1785085,nssv1785143,nssv1785096,nssv1785103,nssv1785140,nssv1785111,nssv1785067,nssv1785157,nssv1785139,nssv1785109,nssv1785133,nssv1785163,nssv1785106,nssv1785134,nssv1785138,nssv1785129,nssv1785142,nssv1785158,nssv1785122,nssv1785104,nssv1785121,nssv1785159,nssv1785094,nssv1785155,nssv1785102,nssv1785101,nssv1785123 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2598112 1 119813839 119815703 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5357444 M 1 0 1 "" NA18507 esv2243415 1 119814182 119815328 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4670944 M 1 0 1 "" NA18507 esv4227 1 119814298 119815334 CNV loss Wang_et_al_2008 18987735 Sequencing essv26668 M 1 0 1 "" YH esv23371 1 119814376 119815139 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14752 M 40 0 1 "" NA19114 esv2758964 1 119818219 120016100 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756860,esv2757749 M 270 3 3 HSD3B1,HSD3BP4,LINC00622,ZNF697 NA18500,NA18501,NA18540,NA18605,NA18624,NA18994 nsv946182 1 119824846 119827795 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785189,nssv1785205,nssv1785195,nssv1785251,nssv1785174,nssv1785190,nssv1785175,nssv1785197,nssv1785176,nssv1785238,nssv1785168,nssv1785191,nssv1785181,nssv1785218,nssv1785242,nssv1785236,nssv1785171,nssv1785194,nssv1785243,nssv1785227,nssv1785241,nssv1785220,nssv1785186,nssv1785213,nssv1785183,nssv1785201,nssv1785166,nssv1785208,nssv1785250,nssv1785228,nssv1785165,nssv1785198,nssv1785177,nssv1785231,nssv1785245,nssv1785234,nssv1785248,nssv1785212,nssv1785173,nssv1785216,nssv1785170,nssv1785254,nssv1785184,nssv1785210,nssv1785244,nssv1785199,nssv1785188,nssv1785240,nssv1785193,nssv1785215,nssv1785169,nssv1785253,nssv1785246,nssv1785237,nssv1785179,nssv1785232,nssv1785249,nssv1785225,nssv1785178,nssv1785223,nssv1785172,nssv1785222,nssv1785192,nssv1785235,nssv1785167,nssv1785217,nssv1785247,nssv1785255,nssv1785185,nssv1785226,nssv1785180,nssv1785221,nssv1785182,nssv1785214,nssv1785211,nssv1785209,nssv1785233,nssv1785204,nssv1785203,nssv1785229,nssv1785230,nssv1785196,nssv1785202,nssv1785256,nssv1785252,nssv1785207,nssv1785187,nssv1785257,nssv1785258,nssv1785164,nssv1785260,nssv1785219,nssv1785224,nssv1785239,nssv1785259,nssv1785200,nssv1785206 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv524727 1 119825494 119857924 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700715 M 2026 0 1 HSD3B1 esv3441891 1 119838913 119838962 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7862081,essv7862082 M 185 2 0 "" NA18520,NA18853 nsv946183 1 119839864 119849279 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785338,nssv1785261,nssv1785283,nssv1785329,nssv1785648,nssv1785294,nssv1785268,nssv1785328,nssv1785654,nssv1785300,nssv1785265,nssv1785314,nssv1785273,nssv1785321,nssv1785271,nssv1785334,nssv1785278,nssv1785306,nssv1785280,nssv1785313,nssv1785264,nssv1785309,nssv1785270,nssv1785319,nssv1785263,nssv1785656,nssv1785289,nssv1785326,nssv1785339,nssv1785327,nssv1785281,nssv1785284,nssv1785267,nssv1785332,nssv1785285,nssv1785324,nssv1785262,nssv1785333,nssv1785653,nssv1785315,nssv1785274,nssv1785325,nssv1785290,nssv1785299,nssv1785655,nssv1785298,nssv1785282,nssv1785291,nssv1785276,nssv1785323,nssv1785649,nssv1785318,nssv1785292,nssv1785320,nssv1785650,nssv1785301,nssv1785266,nssv1785302,nssv1785651,nssv1785303,nssv1785275,nssv1785293,nssv1785272,nssv1785659,nssv1785269,nssv1785337,nssv1785652,nssv1785308,nssv1785286,nssv1785335,nssv1785277,nssv1785665,nssv1785279,nssv1785307,nssv1785330,nssv1785658,nssv1785331,nssv1785312,nssv1785316,nssv1785288,nssv1785336,nssv1785657,nssv1785322,nssv1785660,nssv1785663,nssv1785287,nssv1785662,nssv1785661,nssv1785664,nssv1785297,nssv1785295,nssv1785317,nssv1785296,nssv1785310,nssv1785305,nssv1785304,nssv1785311 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1006564 1 119852126 119880057 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488836 M 29084 0 1 HSD3B1 nsv946184 1 119858209 119859902 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785691,nssv1785715,nssv1785683,nssv1785762,nssv1785678,nssv1785728,nssv1785745,nssv1785731,nssv1785673,nssv1785720,nssv1785743,nssv1785738,nssv1785681,nssv1785723,nssv1785687,nssv1785724,nssv1785748,nssv1785713,nssv1785671,nssv1785696,nssv1785751,nssv1785742,nssv1785746,nssv1785712,nssv1785688,nssv1785692,nssv1785695,nssv1785699,nssv1785667,nssv1785726,nssv1785685,nssv1785700,nssv1785669,nssv1785701,nssv1785679,nssv1785759,nssv1785750,nssv1785703,nssv1785752,nssv1785727,nssv1785744,nssv1785734,nssv1785686,nssv1785689,nssv1785680,nssv1785716,nssv1785690,nssv1785733,nssv1785676,nssv1785729,nssv1785697,nssv1785721,nssv1785747,nssv1785725,nssv1785677,nssv1785704,nssv1785694,nssv1785714,nssv1785674,nssv1785710,nssv1785684,nssv1785740,nssv1785672,nssv1785702,nssv1785675,nssv1785706,nssv1785670,nssv1785761,nssv1785668,nssv1785755,nssv1785749,nssv1785754,nssv1785682,nssv1785698,nssv1785758,nssv1785736,nssv1785707,nssv1785760,nssv1785717,nssv1785711,nssv1785757,nssv1785722,nssv1785735,nssv1785730,nssv1785718,nssv1785693,nssv1785756,nssv1785753,nssv1785705,nssv1785739,nssv1785708,nssv1785741,nssv1785719,nssv1785709,nssv1785666,nssv1785737,nssv1785732 M 97 10 0 HSD3B1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv5682 1 119873987 119937056 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28123 M 1 0 0 HSD3BP4 nsv946185 1 119884388 119886577 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784959,nssv1784998,nssv1785774,nssv1785003,nssv1785011,nssv1784985,nssv1785012,nssv1784979,nssv1784951,nssv1784976,nssv1784956,nssv1784957,nssv1785016,nssv1785008,nssv1785775,nssv1784982,nssv1784953,nssv1785026,nssv1785769,nssv1784980,nssv1784947,nssv1785028,nssv1785020,nssv1784981,nssv1785770,nssv1784960,nssv1785765,nssv1785023,nssv1785767,nssv1785024,nssv1785018,nssv1784978,nssv1785015,nssv1785029,nssv1785014,nssv1784970,nssv1785772,nssv1784975,nssv1784963,nssv1784974,nssv1784955,nssv1784983,nssv1785764,nssv1784973,nssv1784954,nssv1784991,nssv1784965,nssv1784990,nssv1784958,nssv1785004,nssv1784962,nssv1784987,nssv1784949,nssv1784969,nssv1785013,nssv1784989,nssv1784948,nssv1784997,nssv1785766,nssv1784993,nssv1785768,nssv1784995,nssv1785773,nssv1784977,nssv1785017,nssv1784966,nssv1785771,nssv1784996,nssv1784950,nssv1785025,nssv1785019,nssv1785021,nssv1784952,nssv1785030,nssv1784968,nssv1784972,nssv1785000,nssv1785001,nssv1785009,nssv1785027,nssv1784961,nssv1785010,nssv1784971,nssv1784984,nssv1784967,nssv1784988,nssv1784999,nssv1785763,nssv1785006,nssv1785002,nssv1785022,nssv1784986,nssv1784994,nssv1784964,nssv1784992,nssv1785007,nssv1785005 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv24085 1 119886652 119888630 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16442 M 40 1 0 "" NA18909 nsv946186 1 119892950 119963310 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786231,nssv1786300,nssv1786232,nssv1786278,nssv1786217,nssv1786259,nssv1786242,nssv1786260,nssv1786224,nssv1786304,nssv1786227,nssv1786249,nssv1786290,nssv1786283,nssv1786293,nssv1786263,nssv1786219,nssv1786255,nssv1786234,nssv1786303,nssv1786220,nssv1786247,nssv1786228,nssv1786305,nssv1786298,nssv1786286,nssv1786241,nssv1786307,nssv1786295,nssv1786282,nssv1786238,nssv1786253,nssv1786216,nssv1786250,nssv1786291,nssv1786246,nssv1786297,nssv1786251,nssv1786292,nssv1786288,nssv1786218,nssv1786279,nssv1786223,nssv1786276,nssv1786230,nssv1786273,nssv1786235,nssv1786284,nssv1786229,nssv1786258,nssv1786222,nssv1786308,nssv1786237,nssv1786267,nssv1786214,nssv1785031,nssv1786299,nssv1786277,nssv1786233,nssv1786301,nssv1786244,nssv1786302,nssv1786225,nssv1786236,nssv1786226,nssv1786265,nssv1786215,nssv1786261,nssv1786294,nssv1786243,nssv1786221,nssv1786281,nssv1786296,nssv1786268,nssv1786271,nssv1786289,nssv1786280,nssv1786239,nssv1786270,nssv1786245,nssv1786254,nssv1786285,nssv1786269,nssv1786252,nssv1786264,nssv1786266,nssv1786272,nssv1786262,nssv1786287,nssv1786306,nssv1786256,nssv1786248,nssv1786275,nssv1786240,nssv1786309,nssv1786257,nssv1786274 M 97 10 0 HSD3BP4,LINC00622 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv470734 1 119892956 119947406 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547764 M 443 1 0 HSD3BP4,LINC00622 HGDP00451 nsv520283 1 119892957 119928513 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694079 M 2026 1 0 HSD3BP4 nsv818400 1 119892957 119928513 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417674 M 112 1 0 HSD3BP4 NA18994 dgv300n100 1 119897445 119941534 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1015031,nsv1007488 M 29084 0 2 HSD3BP4 dgv301n100 1 119900242 119931076 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011568,nsv1010835 M 29084 0 4 HSD3BP4 nsv999314 1 119900242 119957988 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500074 M 29084 1 0 HSD3BP4,LINC00622 nsv547616 1 119900567 119925165 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723009 M 17421 0 1 HSD3BP4 esv2600511 1 119903367 119942193 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5281567 M 1 0 1 HSD3BP4,LINC00622 NA18507 esv23971 1 119906489 119915469 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14340 M 40 0 3 HSD3BP4 NA18907,NA19190,NA19225 nsv463306 1 119909006 119941185 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539328 M 1557 0 1 HSD3BP4 HGDP00929 nsv547617 1 119909006 119941185 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173122 M 17421 0 1 HSD3BP4 HGDP00929 esv2764231 1 119909125 119941546 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006204,essv7006203 M 1109 0 2 HSD3BP4 RW_0254,RW_0512 dgv302n100 1 119909125 119949938 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013162,nsv1011283,nsv1003595,nsv1000225,nsv1000172,nsv1007381,nsv1004359,nsv1014066 M 29084 0 24 HSD3BP4,LINC00622 dgv303n100 1 119909125 119951040 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997352,nsv1011721,nsv1010534,nsv998903 M 29084 6 8 HSD3BP4,LINC00622 dgv524n54 1 119909125 119964310 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547618,nsv547619 M 17421 2 0 HSD3BP4,LINC00622,ZNF697 HGDP00454,HGDP00477 nsv463317 1 119909125 119964310 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539339 M 1557 1 0 HSD3BP4,LINC00622,ZNF697 HGDP00454 nsv515644 1 119911627 119956126 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv687510,nssv686754,nssv665922,nssv659153,nssv669315,nssv657486,nssv674581,nssv660320,nssv656958,nssv659972,nssv665214,nssv658403,nssv664227,nssv702176 M 2026 1 13 HSD3BP4,LINC00622 dgv304n100 1 119913566 119953099 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000806,nsv1010046,nsv1013637 M 29084 3 0 HSD3BP4,LINC00622 nsv441711 1 119916400 119951038 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1656749,nssv1656747,nssv1656746,nssv1656748 M 270 1 3 HSD3BP4,LINC00622 NA18500,NA18501,NA18540,NA18605 dgv30n27 1 119916907 119947406 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463339,nsv463328 M 1557 2 0 LINC00622 HGDP01238,HGDP01361 nsv547620 1 119916907 119947406 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723010,nssv1173125,nssv1173126 M 17421 2 1 LINC00622 HGDP01238,HGDP01361 nsv437239 1 119917246 119934846 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467120 M 60 0 1 "" NA18500 esv6843 1 119917455 119955252 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29284 M 1 0 0 LINC00622 nsv474837 1 119918344 119918344 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014392 M 9 1 0 "" NA18956 dgv305n100 1 119923597 119957574 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005003,nsv999416,nsv1014079,nsv1005272,nsv1011491 M 29084 0 7 LINC00622 nsv1013821 1 119924164 119941534 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702065 M 29084 1 0 "" nsv437971 1 119924945 119929020 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468052,nssv468041 M 269 0 2 "" NA18500,NA18501 dgv306n100 1 119925245 119957988 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006447,nsv1010583,nsv999291 M 29084 3 0 LINC00622 nsv1013957 1 119926831 119953099 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497433,nssv3497552 M 29084 1 1 LINC00622 esv3894056 1 119938968 119953604 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797388 M 3017 0 1 LINC00622 esv27297 1 119943910 119951764 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16630 M 40 3 0 "" NA18907,NA19190,NA19225 nsv508034 1 119960961 119966961 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621477,nssv618505 M 4 0 0 ZNF697 CHM,NA15510 nsv547621 1 119965826 119969410 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723011 M 17421 0 1 ZNF697 dgv525n54 1 119966489 119968400 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547622,nsv547623,nsv547624 M 17421 0 3 ZNF697 nsv831204 1 120067972 120115614 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1449039,nssv1449050,nssv1449017,nssv1449028 M 95 3 1 HMGCS2,PHGDH nsv831215 1 120067972 120249992 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449150,nssv1449061,nssv1449139,nssv1449106,nssv1449184,nssv1449206,nssv1449161,nssv1449095,nssv1449117,nssv1449084,nssv1449073,nssv1449172,nssv1449128,nssv1449195 M 95 14 0 ADAM30,HMGCS2,NBPF7,PHGDH,REG4 nsv428201 1 120068836 120498679 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv451097,nssv451108,nssv451020,nssv451053,nssv451042,nssv451086,nssv451031,nssv451075 M 62 8 0 ADAM30,HMGCS2,NBPF7,NOTCH2,PHGDH,REG4 HGDP00449,HGDP00450,HGDP00462,HGDP00986,HGDP01089,HGDP01094,NA18916,NA19096 esv2758965 1 120068836 121047873 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757750 M 270 98 1 ADAM30,EMBP1,FAM72B,FCGR1B,HIST2H2BA,HMGCS2,NBPF7,NOTCH2,PHGDH,REG4,SRGAP2-AS1,SRGAP2D NA07000,NA07022,NA07029,NA07048,NA07056,NA07345,NA07348,NA07357,NA10830,NA10831,NA10838,NA10839,NA10854,NA10856,NA10860,NA10861,NA11829,NA11830,NA11839,NA11993,NA11995,NA12005,NA12006,NA12043,NA12154,NA12156,NA12234,NA12236,NA12249,NA12707,NA12717,NA12752,NA12753,NA12760,NA12762,NA12763,NA12813,NA12814,NA12873,NA12874,NA12875,NA18524,NA18529,NA18532,NA18547,NA18558,NA18561,NA18563,NA18566,NA18573,NA18576,NA18577,NA18592,NA18594,NA18603,NA18605,NA18608,NA18609,NA18620,NA18621,NA18622,NA18623,NA18624,NA18637,NA18912,NA18914,NA18942,NA18943,NA18944,NA18945,NA18951,NA18952,NA18953,NA18960,NA18964,NA18967,NA18968,NA18969,NA18970,NA18971,NA18973,NA18974,NA18976,NA18981,NA18987,NA18990,NA18991,NA18997,NA18998,NA18999,NA19007,NA19116,NA19137,NA19143,NA19144,NA19154,NA19204,NA19210,NA19211 nsv831226 1 120133122 120324991 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1449228,nssv1449217 M 95 1 1 ADAM30,NBPF7,NOTCH2,REG4 nsv946187 1 120171601 120207530 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786314,nssv1786383,nssv1786328,nssv1786371,nssv1786335,nssv1786381,nssv1786388,nssv1786333,nssv1786389,nssv1786397,nssv1786387,nssv1786354,nssv1786329,nssv1786401,nssv1786317,nssv1786346,nssv1786331,nssv1786404,nssv1786395,nssv1786375,nssv1786325,nssv1786356,nssv1786390,nssv1786360,nssv1786394,nssv1786380,nssv1786319,nssv1786345,nssv1786338,nssv1786340,nssv1786327,nssv1786350,nssv1786332,nssv1786400,nssv1786316,nssv1786343,nssv1786326,nssv1786385,nssv1786321,nssv1786370,nssv1786334,nssv1786357,nssv1786311,nssv1786344,nssv1786330,nssv1786379,nssv1786324,nssv1786373,nssv1786396,nssv1786376,nssv1786315,nssv1786355,nssv1786320,nssv1786347,nssv1786391,nssv1786405,nssv1786313,nssv1786378,nssv1786323,nssv1786374,nssv1786312,nssv1786398,nssv1786339,nssv1786399,nssv1786341,nssv1786384,nssv1786322,nssv1786310,nssv1786318,nssv1786365,nssv1786392,nssv1786364,nssv1786393,nssv1786358,nssv1786368,nssv1786348,nssv1786402,nssv1786336,nssv1786352,nssv1786386,nssv1786377,nssv1786366,nssv1786349,nssv1786362,nssv1786342,nssv1786359,nssv1786363,nssv1786367,nssv1786361,nssv1786403,nssv1786369,nssv1786351,nssv1786337,nssv1786353,nssv1786406,nssv1786372,nssv1786382 M 97 10 0 NBPF7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945590 1 120185716 120189448 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572832,nssv2572016,nssv2571985,nssv2572030,nssv2572835,nssv2572009,nssv2572035,nssv2572032,nssv2571968,nssv2572023,nssv2571992,nssv2572018,nssv2571993,nssv2572020,nssv2571975,nssv2572001,nssv2571980,nssv2571991,nssv2571995,nssv2572006,nssv2571969,nssv2572010,nssv2572834,nssv2572000,nssv2571981,nssv2571964,nssv2571988,nssv2572027,nssv2571965,nssv2572002,nssv2571971,nssv2571990,nssv2571973,nssv2572005,nssv2571976,nssv2572015,nssv2571974,nssv2572008,nssv2571977,nssv2571994,nssv2571982,nssv2572007,nssv2572836,nssv2571999,nssv2571970,nssv2571989,nssv2571978,nssv2572003,nssv2571972,nssv2572004,nssv2571967,nssv2572021,nssv2571983,nssv2572024,nssv2571986,nssv2572029,nssv2572837,nssv2572014,nssv2571984,nssv2572028,nssv2571966,nssv2571987,nssv2572833,nssv2571998,nssv2572839,nssv2572012,nssv2572838,nssv2572011,nssv2572034,nssv2571996,nssv2571979,nssv2572025,nssv2572013,nssv2571997,nssv2572022,nssv2572017,nssv2572033,nssv2572019,nssv2572031,nssv2572026 M 97 10 0 NBPF7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv10672 1 120188508 120211530 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19092 M 31 1 0 NBPF7 NA18502 nsv436325 1 120192437 120335637 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466262 M 2 0 1 ADAM30,NOTCH2 NA18505 nsv547625 1 120224228 120267631 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723015 M 17421 0 1 ADAM30,NOTCH2 nsv2610 1 120252583 120284658 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7484 M 9 0 1 NOTCH2 NA12156 nsv820378 1 120328470 120449163 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420569 M 1 1 0 NOTCH2 NA10851 esv22009 1 120328470 120498601 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11320,esv20760,esv15218 M 40 23 5 NOTCH2 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12239,NA12287,NA12414,NA12749,NA12776,NA12878,NA15510,NA18502,NA18505,NA18508,NA18517,NA18916,NA19099 nsv824331 1 120328929 120449163 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1430366,nssv1440831,nssv1432296,nssv1437785,nssv1438602,nssv1433296,nssv1437240,nssv1424249,nssv1431836,nssv1422387,nssv1423972,nssv1437961,nssv1428045,nssv1427280,nssv1425522,nssv1433440,nssv1421471,nssv1429580,nssv1434192,nssv1423686,nssv1424762,nssv1423142,nssv1439477,nssv1431097,nssv1436356,nssv1440143,nssv1435675,nssv1434882,nssv1428842,nssv1426410 M 31 30 0 NOTCH2 AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv10683 1 120332098 120432443 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17089,nssv16762,nssv17408,nssv23370,nssv17403,nssv18422,nssv18086,nssv18437,nssv24294,nssv16417,nssv20760,nssv15445,nssv18062,nssv16751 M 31 13 0 NOTCH2 NA07029,NA07048,NA10839,NA11830,NA12155,NA12872,NA18563,NA18572,NA18942,NA18972,NA18980,NA19007,NA19221 nsv946188 1 120333114 120416267 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786425,nssv1786453,nssv1786411,nssv1786467,nssv1786438,nssv1786459,nssv1786479,nssv1786469,nssv1786436,nssv1786468,nssv1786477,nssv1786450,nssv1786410,nssv1786430,nssv1786485,nssv1786457,nssv1786426,nssv1786442,nssv1786428,nssv1786443,nssv1786414,nssv1786437,nssv1786418,nssv1786472,nssv1786422,nssv1786440,nssv1786484,nssv1786476,nssv1786435,nssv1786454,nssv1786429,nssv1786441,nssv1786424,nssv1786460,nssv1786421,nssv1786473,nssv1786432,nssv1786447,nssv1786417,nssv1786458,nssv1786423,nssv1786444,nssv1786413,nssv1786448,nssv1786409,nssv1786449,nssv1786431,nssv1786463,nssv1786427,nssv1786452,nssv1786408,nssv1786465,nssv1786480,nssv1786433,nssv1786486,nssv1786470,nssv1786482,nssv1786462,nssv1786412,nssv1786445,nssv1786481,nssv1786455,nssv1786416,nssv1786474,nssv1786420,nssv1786471,nssv1786478,nssv1786446,nssv1786415,nssv1786434,nssv1786483,nssv1786464,nssv1786419,nssv1786461,nssv1786407,nssv1786456,nssv1786466,nssv1786439,nssv1786451,nssv1786475 M 97 10 0 NOTCH2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv166e59 1 120333252 120344150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3323973,esv3341210,esv3365653 M 185 3 0 NOTCH2 NA12891,NA19238,NA19239 dgv167e59 1 120333252 120439950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3424178,esv3389755 M 185 2 0 NOTCH2 NA12878,NA12892 nsv514912 1 120336200 120391104 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2848376,nssv2848347,nssv2848375,nssv2848175,nssv2848359,nssv2847954,nssv2848352,nssv2848348,nssv2848357,nssv2848162,nssv2848383,nssv2848163,nssv2848363,nssv2848349,nssv2848391,nssv2847914,nssv2848384,nssv2847991,nssv2848378,nssv2848090,nssv2848364,nssv2848268,nssv2848385,nssv2848204,nssv2848351,nssv2847918,nssv2848393,nssv2847948,nssv2848395,nssv2848216,nssv2848373,nssv2848241,nssv2848356,nssv2847923,nssv2848387,nssv2847931,nssv2848360,nssv2848173,nssv2848399,nssv2847944,nssv2848365,nssv2848149,nssv2848362,nssv2847945,nssv2848396,nssv2847970,nssv2848388,nssv2847996,nssv2848361,nssv2848324,nssv2848400,nssv2847949,nssv2848350,nssv2848067,nssv2848398,nssv2848110,nssv2848358,nssv2848020,nssv2848366,nssv2848076,nssv2848374,nssv2848026,nssv2848382,nssv2847997,nssv2848381,nssv2848250,nssv2848369,nssv2848144,nssv2848367,nssv2848081,nssv2848354,nssv2848315,nssv2848377,nssv2847916,nssv2848372,nssv2848017,nssv2848392,nssv2848069,nssv2848379,nssv2847977,nssv2848353,nssv2847941,nssv2848389,nssv2848048,nssv2848394,nssv2848153,nssv2848371,nssv2847964,nssv2848397,nssv2848167,nssv2848370,nssv2847963,nssv2848390,nssv2848227,nssv2848368,nssv2848066,nssv2848386,nssv2848289,nssv2848380,nssv2848093,nssv2848355,nssv2848165,nssv2848061,nssv2848002,nssv2848203,nssv2848177,nssv2848126,nssv2847966,nssv2848071,nssv2848260,nssv2847938,nssv2848082,nssv2848281,nssv2848056,nssv2848000,nssv2848232,nssv2848015,nssv2848022,nssv2848011,nssv2848078,nssv2848087,nssv2848213,nssv2848190,nssv2848132,nssv2848218,nssv2848318,nssv2847942,nssv2848228,nssv2848292,nssv2848196,nssv2848157,nssv2848049,nssv2848210,nssv2848226,nssv2848331,nssv2847924,nssv2848311,nssv2847939,nssv2848137,nssv2848052,nssv2848032,nssv2848109,nssv2848207,nssv2848001,nssv2848184,nssv2848301,nssv2848101,nssv2847946,nssv2848154,nssv2848095,nssv2848166,nssv2847965,nssv2847955,nssv2848161,nssv2848145,nssv2848046,nssv2848043,nssv2848224,nssv2848314,nssv2848181,nssv2848317,nssv2848147,nssv2848264,nssv2848062,nssv2848199,nssv2848265,nssv2848160,nssv2848141,nssv2848240,nssv2848030,nssv2847999,nssv2848155,nssv2848105,nssv2848333,nssv2848140,nssv2848117,nssv2848270,nssv2848259,nssv2847990,nssv2848096,nssv2847962,nssv2848092,nssv2848334,nssv2848085,nssv2848131,nssv2848252,nssv2848075,nssv2848023,nssv2848179,nssv2848021,nssv2848104,nssv2848197,nssv2848079,nssv2848143,nssv2847985,nssv2848272,nssv2848025,nssv2847992,nssv2848158,nssv2847927,nssv2848293,nssv2848313,nssv2848215,nssv2847984,nssv2847998,nssv2848103,nssv2848112,nssv2848198,nssv2848119,nssv2848097,nssv2848176,nssv2848285,nssv2848323,nssv2848113,nssv2848098,nssv2848115,nssv2848170,nssv2848055,nssv2848327,nssv2848086,nssv2848253,nssv2848028,nssv2847993,nssv2847969,nssv2847936,nssv2847980,nssv2848091,nssv2848065,nssv2848242,nssv2848263,nssv2848169,nssv2848251,nssv2848054,nssv2848072,nssv2848239,nssv2848283,nssv2848338,nssv2848308,nssv2848016,nssv2847932,nssv2848122,nssv2848033,nssv2848298,nssv2847958,nssv2848340,nssv2848150,nssv2848191,nssv2847976,nssv2848209,nssv2848114,nssv2848108,nssv2848328,nssv2847961,nssv2848037,nssv2848274,nssv2848038,nssv2847915,nssv2848125,nssv2848217,nssv2848123,nssv2847967,nssv2847973,nssv2848269,nssv2848275,nssv2848202,nssv2848073,nssv2848244,nssv2848080,nssv2848305,nssv2848008,nssv2848100,nssv2848064,nssv2847975,nssv2848214,nssv2848221,nssv2848099,nssv2848019,nssv2848238,nssv2848018,nssv2848247,nssv2848290,nssv2847953,nssv2848291,nssv2848111,nssv2848219,nssv2847935,nssv2848294,nssv2847981,nssv2848300,nssv2848188,nssv2848134,nssv2848130,nssv2848004,nssv2847960,nssv2848325,nssv2848128,nssv2848068,nssv2847952,nssv2847959,nssv2848339,nssv2848237,nssv2848036,nssv2848282,nssv2848192,nssv2848201,nssv2847971,nssv2847982,nssv2848321,nssv2848070,nssv2848089,nssv2848256,nssv2848233,nssv2847922,nssv2848009,nssv2848129,nssv2847947,nssv2847929,nssv2848151,nssv2848249,nssv2848044,nssv2848059,nssv2847919,nssv2848271,nssv2848027,nssv2847921,nssv2848335,nssv2848225,nssv2847928,nssv2848189,nssv2848235,nssv2848330,nssv2848088,nssv2848121,nssv2847951,nssv2848047,nssv2847986,nssv2848187,nssv2848164,nssv2848178,nssv2848276,nssv2848346,nssv2848337,nssv2847950,nssv2848286,nssv2848135,nssv2847995,nssv2848332,nssv2848212,nssv2848003,nssv2848127,nssv2848220,nssv2848146,nssv2848185,nssv2847926,nssv2848174,nssv2848156,nssv2848133,nssv2848345,nssv2848208,nssv2848142,nssv2848287,nssv2848039,nssv2848077,nssv2847930,nssv2848152,nssv2848040,nssv2848344,nssv2848258,nssv2848284,nssv2848295,nssv2847933,nssv2848299,nssv2848296,nssv2848193,nssv2847920,nssv2848254,nssv2848102,nssv2847979,nssv2848231,nssv2847988,nssv2848084,nssv2848024,nssv2848029,nssv2848031,nssv2848316,nssv2848312,nssv2848280,nssv2848195,nssv2848206,nssv2848322,nssv2848013,nssv2847994,nssv2848183,nssv2847934,nssv2848267,nssv2848262,nssv2848083,nssv2847925,nssv2848343,nssv2848273,nssv2848261,nssv2848320,nssv2848336,nssv2847987,nssv2848205,nssv2848342,nssv2848159,nssv2848211,nssv2848297,nssv2848304,nssv2848045,nssv2848051,nssv2847937,nssv2848118,nssv2848236,nssv2848060,nssv2848148,nssv2847972,nssv2848063,nssv2848302,nssv2848120,nssv2848279,nssv2848309,nssv2848171,nssv2848050,nssv2848006,nssv2848124,nssv2847913,nssv2848138,nssv2848326,nssv2848243,nssv2847978,nssv2848014,nssv2848180,nssv2848168,nssv2848010,nssv2848186,nssv2848035,nssv2847968,nssv2847943,nssv2848139,nssv2848094,nssv2847917,nssv2848278,nssv2847989,nssv2848248,nssv2848288,nssv2848230,nssv2848245,nssv2847956,nssv2848057,nssv2848303,nssv2848277,nssv2848310,nssv2848223,nssv2848005,nssv2848116,nssv2848058,nssv2848042,nssv2848319,nssv2847983,nssv2848074,nssv2848107,nssv2848007,nssv2848034,nssv2848266,nssv2848041,nssv2848307,nssv2848053,nssv2848229,nssv2848136,nssv2848222,nssv2848329,nssv2847957,nssv2848234,nssv2848194,nssv2848341,nssv2848172,nssv2848106,nssv2848012,nssv2848200,nssv2848255,nssv2848246,nssv2848306,nssv2848182,nssv2847940,nssv2847974,nssv2848257 M 2366 488 0 NOTCH2 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 dgv168e59 1 120356052 120412750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3324912,esv3413453 M 185 2 0 NOTCH2 NA12891,NA19238 esv3329918 1 120410252 120427150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691767 M 185 1 0 NOTCH2 NA12891 esv3343184 1 120413952 120439750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691768 M 185 1 0 "" NA19238 nsv946190 1 120416267 120419017 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786496,nssv1786516,nssv1786490,nssv1786604,nssv1786494,nssv1786506,nssv1786493,nssv1786517,nssv1786489,nssv1786593,nssv1786509,nssv1786492,nssv1786521,nssv1786598,nssv1786508,nssv1786511,nssv1786597,nssv1786514,nssv1786488,nssv1786501,nssv1786499,nssv1786518,nssv1786515,nssv1786495,nssv1786500,nssv1786505,nssv1786601,nssv1786596,nssv1786503,nssv1786507,nssv1786602,nssv1786512,nssv1786498,nssv1786594,nssv1786520,nssv1786502,nssv1786605,nssv1786491,nssv1786510,nssv1786497,nssv1786599,nssv1786504,nssv1786487,nssv1786513,nssv1786600,nssv1786603,nssv1786519,nssv1786595 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946191 1 120419017 120498198 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786681,nssv1786645,nssv1786637,nssv1786674,nssv1786624,nssv1786644,nssv1786679,nssv1786651,nssv1786609,nssv1786660,nssv1786618,nssv1786670,nssv1786678,nssv1786638,nssv1786676,nssv1786668,nssv1786625,nssv1786650,nssv1786615,nssv1786658,nssv1786634,nssv1786647,nssv1786616,nssv1786636,nssv1786620,nssv1786663,nssv1786613,nssv1786633,nssv1786627,nssv1786657,nssv1786635,nssv1786671,nssv1786622,nssv1786629,nssv1786683,nssv1786662,nssv1786612,nssv1786641,nssv1786608,nssv1786652,nssv1786623,nssv1786667,nssv1786610,nssv1786665,nssv1786677,nssv1786654,nssv1786621,nssv1786648,nssv1786630,nssv1786656,nssv1786626,nssv1786655,nssv1786607,nssv1786659,nssv1786628,nssv1786640,nssv1786685,nssv1786649,nssv1786684,nssv1786672,nssv1786617,nssv1786664,nssv1786611,nssv1786642,nssv1786631,nssv1786653,nssv1786680,nssv1786646,nssv1786619,nssv1786639,nssv1786682,nssv1786643,nssv1786614,nssv1786661,nssv1786675,nssv1786632,nssv1786666,nssv1786673,nssv1786669,nssv1786606 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3405729 1 120427752 120438850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691769 M 185 1 0 "" NA12891 nsv435845 1 120436583 120493487 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466273 M 2 0 1 "" NA15510 nsv547626 1 120452971 120478149 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723016 M 17421 0 1 "" dgv307n100 1 120474678 121184490 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010535,nsv1012008,nsv1007540 M 29084 3 0 EMBP1,FAM72B,FCGR1B,HIST2H2BA,SRGAP2-AS1,SRGAP2D dgv526n54 1 120477502 120478149 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547628,nsv547627 M 17421 0 2 "" nsv946193 1 120548601 120579312 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786692,nssv1786696,nssv1786693,nssv1786691,nssv1786695,nssv1786687,nssv1786688,nssv1786694,nssv1786689,nssv1786690,nssv1786686 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1009340 1 120549218 121045604 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487088 M 29084 1 0 EMBP1,FAM72B,FCGR1B,HIST2H2BA,SRGAP2-AS1,SRGAP2D esv26241 1 120557209 120738188 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20642,esv20146 M 40 25 1 FAM72B,FCGR1B,HIST2H2BA NA07045,NA11931,NA12006,NA12239,NA12287,NA12414,NA12489,NA12776,NA15510,NA18502,NA18505,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv831237 1 120568788 120671324 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449296,nssv1449384,nssv1449418,nssv1449407,nssv1449283,nssv1449451,nssv1449329,nssv1449340,nssv1449351,nssv1449272,nssv1449250,nssv1449462,nssv1449429,nssv1449239,nssv1449318,nssv1449362,nssv1449307,nssv1449440,nssv1449373,nssv1449395,nssv1449261 M 95 21 0 FAM72B nsv946194 1 120586971 120591761 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784639,nssv1784669,nssv1786715,nssv1784682,nssv1784640,nssv1784706,nssv1786701,nssv1784714,nssv1786704,nssv1784689,nssv1784704,nssv1784707,nssv1786700,nssv1784650,nssv1786709,nssv1784662,nssv1786707,nssv1784683,nssv1784697,nssv1784675,nssv1786699,nssv1784709,nssv1784637,nssv1784681,nssv1786706,nssv1784655,nssv1784642,nssv1784694,nssv1784643,nssv1784711,nssv1784698,nssv1784713,nssv1786711,nssv1784673,nssv1784649,nssv1784676,nssv1784702,nssv1784657,nssv1784703,nssv1784645,nssv1784647,nssv1784670,nssv1784638,nssv1784679,nssv1786714,nssv1784674,nssv1786713,nssv1784693,nssv1786712,nssv1784656,nssv1784695,nssv1784664,nssv1786698,nssv1784685,nssv1786703,nssv1784688,nssv1786708,nssv1784666,nssv1784699,nssv1784668,nssv1786702,nssv1784659,nssv1784701,nssv1784667,nssv1784700,nssv1784663,nssv1784696,nssv1784690,nssv1786710,nssv1786697,nssv1784646,nssv1784648,nssv1786705,nssv1784665,nssv1784684,nssv1784677,nssv1784687,nssv1784641,nssv1784658,nssv1784652,nssv1784680,nssv1784644,nssv1784671,nssv1784705,nssv1784651,nssv1784653,nssv1784686,nssv1784691,nssv1784654,nssv1784712,nssv1784708,nssv1784710,nssv1784661,nssv1784672,nssv1784692,nssv1784678,nssv1784660 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945591 1 120591761 120596918 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572884,nssv2572882,nssv2572880,nssv2572886,nssv2572885,nssv2572888,nssv2572887,nssv2572879,nssv2572881,nssv2572883,nssv2572878 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946195 1 120596918 120689146 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1784718,nssv1784716,nssv1784722,nssv1784723,nssv1784717,nssv1784720,nssv1785340,nssv1784719,nssv1784721,nssv1784715,nssv1785341 M 97 10 0 FAM72B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3894067 1 120603002 120706587 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25792901 M 3017 1 0 FAM72B nsv10694 1 120604676 120605212 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24584 M 31 1 0 "" NA18972 nsv10705 1 120606505 120607290 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16767,nssv19422 M 31 2 0 "" NA18502,NA19132 nsv10717 1 120610192 120611049 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21090 M 31 1 0 "" NA19221 nsv10728 1 120613472 120613699 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv15775,nssv17097 M 31 0 2 "" NA18980,NA19132 nsv10739 1 120614452 120615820 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17086,nssv20759 M 31 2 0 "" NA18552,NA19173 nsv10750 1 120616343 120619191 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21420,nssv19752,nssv17738,nssv17427 M 31 4 0 "" NA12155,NA18502,NA19132,NA19221 nsv10761 1 120619191 120622746 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17416 M 31 1 0 "" NA18552 nsv945592 1 120635884 120636473 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572898,nssv2572894,nssv2572896,nssv2572893,nssv2572895,nssv2572892,nssv2572891,nssv2572899,nssv2572890,nssv2572889,nssv2572897 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946196 1 120689146 120703374 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785353,nssv1785414,nssv1785346,nssv1785416,nssv1785419,nssv1785433,nssv1785350,nssv1785401,nssv1785363,nssv1785397,nssv1785345,nssv1785384,nssv1785351,nssv1785434,nssv1785359,nssv1785431,nssv1785357,nssv1785417,nssv1785355,nssv1785430,nssv1785364,nssv1785379,nssv1785348,nssv1785385,nssv1785354,nssv1785396,nssv1785420,nssv1785438,nssv1785370,nssv1785383,nssv1785361,nssv1785432,nssv1785424,nssv1785376,nssv1785360,nssv1785399,nssv1785428,nssv1785398,nssv1785343,nssv1785393,nssv1785426,nssv1785400,nssv1785423,nssv1785369,nssv1785362,nssv1785435,nssv1785347,nssv1785375,nssv1785421,nssv1785342,nssv1785366,nssv1785413,nssv1785367,nssv1785391,nssv1785427,nssv1785418,nssv1785344,nssv1785429,nssv1785422,nssv1785394,nssv1785373,nssv1785390,nssv1785352,nssv1785437,nssv1785371,nssv1785402,nssv1785356,nssv1785386,nssv1785425,nssv1785409,nssv1785358,nssv1785372,nssv1785349,nssv1785395,nssv1785411,nssv1785405,nssv1785410,nssv1785412,nssv1785403,nssv1785374,nssv1785389,nssv1785407,nssv1785415,nssv1785378,nssv1785404,nssv1785388,nssv1785408,nssv1785382,nssv1785392,nssv1785365,nssv1785387,nssv1785406,nssv1785377,nssv1785380,nssv1785368,nssv1785436,nssv1785381 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv161091 1 120689195 120697970 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179669 M 24 "" nsv2621 1 120690044 120724393 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1379 M 9 1 0 HIST2H2BA NA19240 nsv946197 1 120703374 120707186 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785441,nssv1785449,nssv1785445,nssv1785444,nssv1785442,nssv1785439,nssv1785448,nssv1785447,nssv1785446,nssv1785443,nssv1785440 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946198 1 120707186 120708434 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785461,nssv1785504,nssv1785527,nssv1785494,nssv1785471,nssv1785503,nssv1785532,nssv1785505,nssv1785529,nssv1785493,nssv1785454,nssv1785518,nssv1785467,nssv1785522,nssv1785481,nssv1785501,nssv1785528,nssv1785495,nssv1785472,nssv1785515,nssv1785455,nssv1785524,nssv1785465,nssv1785507,nssv1785479,nssv1785521,nssv1785469,nssv1785490,nssv1785460,nssv1785544,nssv1785478,nssv1785525,nssv1785451,nssv1785520,nssv1785536,nssv1785517,nssv1785463,nssv1785477,nssv1785470,nssv1785514,nssv1785459,nssv1785497,nssv1785531,nssv1785489,nssv1785534,nssv1785542,nssv1785462,nssv1785510,nssv1785533,nssv1785526,nssv1785474,nssv1785485,nssv1785452,nssv1785540,nssv1785535,nssv1785476,nssv1785475,nssv1785508,nssv1785457,nssv1785484,nssv1785453,nssv1785483,nssv1785464,nssv1785498,nssv1785458,nssv1785502,nssv1785456,nssv1785500,nssv1785466,nssv1785450,nssv1785530,nssv1785519,nssv1785468,nssv1785538,nssv1785509,nssv1785486,nssv1785482,nssv1785523,nssv1785543,nssv1785491,nssv1785541,nssv1785513,nssv1785499,nssv1785487,nssv1785537,nssv1785516,nssv1785488,nssv1785480,nssv1785539,nssv1785496,nssv1785473,nssv1785512,nssv1785511,nssv1785546,nssv1785492,nssv1785506,nssv1785545 M 97 10 0 HIST2H2BA HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946199 1 120708434 120738398 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785556,nssv1785552,nssv1785554,nssv1785548,nssv1785549,nssv1785551,nssv1785553,nssv1785547,nssv1785550,nssv1785555,nssv1785557 M 97 10 0 FCGR1B,HIST2H2BA HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv10772 1 120711823 120734588 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24899,nssv17746 M 31 2 0 FCGR1B,HIST2H2BA NA18552,NA18972 esv28381 1 120788253 120844675 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17319,esv11495,esv15023 M 40 22 1 SRGAP2-AS1,SRGAP2D NA07037,NA07045,NA11931,NA11993,NA12006,NA12287,NA12414,NA12489,NA12776,NA15510,NA18502,NA18511,NA18517,NA18858,NA18861,NA18907,NA18909,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225 nsv824342 1 120788253 120851924 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437242,nssv1437796,nssv1428046,nssv1431837,nssv1427281,nssv1434883,nssv1432308,nssv1437964,nssv1425523,nssv1433442,nssv1423143,nssv1433407,nssv1424763,nssv1429581,nssv1438603,nssv1434193,nssv1424262,nssv1423973,nssv1423697,nssv1439478,nssv1426411,nssv1440832,nssv1436357,nssv1435676,nssv1431098,nssv1421473,nssv1422388,nssv1440144,nssv1430367,nssv1428843 M 31 30 0 SRGAP2-AS1,SRGAP2D AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv10783 1 120788984 120808025 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21780 M 31 0 1 SRGAP2-AS1 NA19221 nsv946200 1 120789506 120833869 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785564,nssv1785566,nssv1785565,nssv1785559,nssv1785567,nssv1785563,nssv1785560,nssv1785562,nssv1785561,nssv1785558,nssv1785568 M 97 10 0 SRGAP2-AS1,SRGAP2D HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831248 1 120792187 120861332 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449473 M 95 0 1 SRGAP2-AS1,SRGAP2D nsv820880 1 120805585 120840316 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420580 M 1 1 0 SRGAP2-AS1,SRGAP2D NA10851 nsv506959 1 120830477 120836477 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623285 M 4 0 0 SRGAP2-AS1,SRGAP2D NA18994 nsv946202 1 120833869 120836222 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572916,nssv2572936,nssv2572906,nssv2572937,nssv2572973,nssv2572965,nssv2572983,nssv2572949,nssv2572913,nssv2572957,nssv2572977,nssv2572959,nssv2572918,nssv2572989,nssv2572903,nssv2572900,nssv2572914,nssv2572926,nssv2572915,nssv2572946,nssv2572917,nssv2572934,nssv2572931,nssv2572927,nssv2572911,nssv2572947,nssv2572901,nssv2572984,nssv2572978,nssv2572935,nssv2572902,nssv2572963,nssv2572928,nssv2572968,nssv2572907,nssv2572942,nssv2572920,nssv2572958,nssv2572988,nssv2572941,nssv2572987,nssv2572950,nssv2572980,nssv2572961,nssv2572971,nssv2572991,nssv2572922,nssv2572951,nssv2572910,nssv2572953,nssv2572974,nssv2572986,nssv2572979,nssv2572933,nssv2572905,nssv2572966,nssv2572976,nssv2572964,nssv2572912,nssv2572948,nssv2572904,nssv2572925,nssv2572972,nssv2572944,nssv2572909,nssv2572952,nssv2572919,nssv2572945,nssv2572929,nssv2572930,nssv2572990,nssv2572923,nssv2572908,nssv2572981,nssv2572975,nssv2572969,nssv2572924,nssv2572954,nssv2572921,nssv2572940,nssv2572939,nssv2572960,nssv2572938,nssv2572943,nssv2572932,nssv2572970,nssv2572955,nssv2572982,nssv2572956,nssv2572967,nssv2572985 M 97 10 0 SRGAP2-AS1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946201 1 120833869 120851258 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785577,nssv1785605,nssv1785580,nssv1785785,nssv1785600,nssv1785631,nssv1785590,nssv1785632,nssv1785581,nssv1785603,nssv1785572,nssv1785595,nssv1785646,nssv1785644,nssv1785647,nssv1785609,nssv1785586,nssv1785619,nssv1785573,nssv1785607,nssv1785584,nssv1785792,nssv1785776,nssv1785784,nssv1785578,nssv1785639,nssv1785591,nssv1785608,nssv1785588,nssv1785592,nssv1785576,nssv1785613,nssv1785778,nssv1785641,nssv1785570,nssv1785793,nssv1785579,nssv1785627,nssv1785594,nssv1785643,nssv1785781,nssv1785628,nssv1785571,nssv1785645,nssv1785582,nssv1785640,nssv1785598,nssv1785616,nssv1785783,nssv1785611,nssv1785589,nssv1785629,nssv1785593,nssv1785637,nssv1785779,nssv1785638,nssv1785597,nssv1785789,nssv1785574,nssv1785623,nssv1785782,nssv1785633,nssv1785575,nssv1785614,nssv1785777,nssv1785610,nssv1785583,nssv1785786,nssv1785780,nssv1785625,nssv1785587,nssv1785630,nssv1785585,nssv1785620,nssv1785618,nssv1785635,nssv1785788,nssv1785604,nssv1785791,nssv1785624,nssv1785569,nssv1785606,nssv1785621,nssv1785787,nssv1785642,nssv1785622,nssv1785612,nssv1785599,nssv1785626,nssv1785615,nssv1785602,nssv1785617,nssv1785790,nssv1785601,nssv1785634,nssv1785636,nssv1785596 M 97 10 0 SRGAP2-AS1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945593 1 120836222 120840804 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574007,nssv2573953,nssv2572999,nssv2573969,nssv2573937,nssv2573948,nssv2573988,nssv2573978,nssv2573000,nssv2572993,nssv2573995,nssv2573966,nssv2573001,nssv2573982,nssv2572996,nssv2573984,nssv2573931,nssv2573999,nssv2573945,nssv2573967,nssv2573989,nssv2573951,nssv2573003,nssv2573998,nssv2573933,nssv2573965,nssv2573946,nssv2573958,nssv2573936,nssv2573957,nssv2573934,nssv2573942,nssv2573990,nssv2574008,nssv2573929,nssv2573962,nssv2573932,nssv2573950,nssv2573002,nssv2573963,nssv2573994,nssv2574002,nssv2572994,nssv2573959,nssv2573997,nssv2573952,nssv2574004,nssv2573985,nssv2574005,nssv2573954,nssv2573996,nssv2573960,nssv2573939,nssv2573980,nssv2572995,nssv2573974,nssv2573941,nssv2574001,nssv2572997,nssv2572992,nssv2572998,nssv2573961,nssv2573935,nssv2573972,nssv2573993,nssv2573971,nssv2573928,nssv2573977,nssv2574000,nssv2573976,nssv2573930,nssv2573955,nssv2573991,nssv2573973,nssv2573992,nssv2573964,nssv2573938,nssv2573970,nssv2573944,nssv2573981,nssv2573975,nssv2573986,nssv2573979,nssv2573943,nssv2573949,nssv2574003,nssv2573968,nssv2573940,nssv2573983,nssv2573956,nssv2574006,nssv2573947 M 97 10 0 SRGAP2-AS1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945594 1 120840804 120841844 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574028,nssv2574091,nssv2574012,nssv2574040,nssv2574085,nssv2574009,nssv2574015,nssv2574090,nssv2574017,nssv2574065,nssv2574082,nssv2574036,nssv2574024,nssv2574070,nssv2574079,nssv2574072,nssv2574011,nssv2574049,nssv2574097,nssv2574092,nssv2574086,nssv2574073,nssv2574037,nssv2574048,nssv2574018,nssv2574062,nssv2574026,nssv2574051,nssv2574014,nssv2574056,nssv2574081,nssv2574044,nssv2574089,nssv2574045,nssv2574098,nssv2574060,nssv2574019,nssv2574078,nssv2574021,nssv2574050,nssv2574087,nssv2574055,nssv2574030,nssv2574041,nssv2574080,nssv2574069,nssv2574022,nssv2574077,nssv2574020,nssv2574042,nssv2574025,nssv2574068,nssv2574100,nssv2574058,nssv2574038,nssv2574064,nssv2574010,nssv2574054,nssv2574084,nssv2574071,nssv2574083,nssv2574101,nssv2574029,nssv2574061,nssv2574023,nssv2574032,nssv2574016,nssv2574039,nssv2574013,nssv2574095,nssv2574093,nssv2574046,nssv2574033,nssv2574094,nssv2574031,nssv2574099,nssv2574027,nssv2574052,nssv2574035,nssv2574075,nssv2574066,nssv2574076,nssv2574047,nssv2574043,nssv2574057,nssv2574053,nssv2574063,nssv2574034,nssv2574059,nssv2574067,nssv2574096,nssv2574074 M 97 10 0 SRGAP2-AS1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945595 1 120841844 120851258 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574114,nssv2574162,nssv2574115,nssv2574130,nssv2574177,nssv2574147,nssv2574122,nssv2574128,nssv2574178,nssv2574129,nssv2574109,nssv2574172,nssv2574113,nssv2574103,nssv2574111,nssv2574155,nssv2574179,nssv2574165,nssv2574120,nssv2574140,nssv2574116,nssv2574154,nssv2574131,nssv2574138,nssv2574124,nssv2574126,nssv2574125,nssv2574152,nssv2574181,nssv2574146,nssv2574180,nssv2574134,nssv2574107,nssv2574136,nssv2574174,nssv2574164,nssv2574117,nssv2574160,nssv2574112,nssv2574161,nssv2574106,nssv2574144,nssv2574182,nssv2574156,nssv2574118,nssv2574167,nssv2574105,nssv2574153,nssv2574132,nssv2574148,nssv2574173,nssv2574159,nssv2574123,nssv2574139,nssv2574119,nssv2574149,nssv2574121,nssv2574170,nssv2574176,nssv2574158,nssv2574108,nssv2574168,nssv2574110,nssv2574133,nssv2574127,nssv2574171,nssv2574175,nssv2574135,nssv2574104,nssv2574143,nssv2574151,nssv2574166,nssv2574145,nssv2574169,nssv2574137,nssv2574163,nssv2574102,nssv2574157,nssv2574150,nssv2574142,nssv2574141 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv308n100 1 120857051 121045604 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001816,nsv1006385,nsv998860,nsv1009403,nsv1010551,nsv1014320,nsv1001750,nsv1014350,nsv1004068,nsv1000212 M 29084 31 0 EMBP1 esv2761521 1 120857051 121057404 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6995622,essv6995634,essv6995667,essv6995656,essv6995611,essv6995645 M 1109 6 0 EMBP1 SW_0001,SW_0505,SW_0589,SW_0837,SW_0884,SW_1245 dgv309n100 1 120857051 121184490 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012328,nsv1006475,nsv1006003,nsv1000866,nsv1010451,nsv1007994 M 29084 27 0 EMBP1 dgv31n27 1 120866130 121013322 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463361,nsv463395,nsv463383,nsv463372,nsv463350,nsv463406 M 1557 6 0 EMBP1 1780854327_A,1780862227_A,1780862433_A,1780862597_A,1782681236_A,NINDS_230 dgv527n54 1 120866130 121072101 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547632,nsv547633,nsv547631,nsv547630,nsv547629 M 17421 10 0 EMBP1 1780854327_A,1780862597_A dgv310n100 1 120870371 121005815 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004927,nsv1002887 M 29084 3 0 EMBP1 dgv6e55 1 120874363 120992603 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750800,esv2750802,esv2750801 M 771 8 0 EMBP1 BEC_148,BEC_506,BEC_712 nsv474310 1 120899463 120899463 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018672 M 9 1 0 "" NA18507 nsv946205 1 120900126 120901450 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1785814,nssv1785871,nssv1785817,nssv1785876,nssv1785890,nssv1785883,nssv1785888,nssv1785854,nssv1785827,nssv1785899,nssv1785895,nssv1786126,nssv1785823,nssv1785859,nssv1785832,nssv1785905,nssv1785896,nssv1785858,nssv1785822,nssv1785865,nssv1785828,nssv1785860,nssv1785813,nssv1785841,nssv1785893,nssv1785870,nssv1785820,nssv1785904,nssv1785818,nssv1785877,nssv1785829,nssv1785861,nssv1785821,nssv1785844,nssv1785833,nssv1785873,nssv1785815,nssv1785887,nssv1785812,nssv1785837,nssv1785897,nssv1785869,nssv1785831,nssv1785875,nssv1785835,nssv1785898,nssv1785824,nssv1785845,nssv1785892,nssv1785903,nssv1785830,nssv1785856,nssv1785889,nssv1785855,nssv1785840,nssv1785884,nssv1785839,nssv1785838,nssv1785826,nssv1785902,nssv1785816,nssv1785862,nssv1785842,nssv1785834,nssv1785825,nssv1785857,nssv1785836,nssv1785880,nssv1785891,nssv1785848,nssv1785819,nssv1785879,nssv1785894,nssv1785900,nssv1785874,nssv1785863,nssv1785878,nssv1785811,nssv1785882,nssv1785849,nssv1785847,nssv1785886,nssv1785850,nssv1785901,nssv1785867,nssv1786127,nssv1785851,nssv1785843,nssv1785864,nssv1785853,nssv1785866,nssv1785868,nssv1785885,nssv1785852,nssv1785846,nssv1785872,nssv1785881 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv521003 1 120902013 121013322 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv679659,nssv685111,nssv680164 M 2026 3 0 EMBP1 nsv547634 1 120902013 121013322 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173130,nssv723028,nssv1173129,nssv723027,nssv1173132,nssv723030,nssv1173131,nssv723029 M 17421 8 0 EMBP1 1780862227_A,1780862433_A,1782681236_A,NINDS_230 dgv311n100 1 120908641 121024941 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013773,nsv1008215 M 29084 2 0 EMBP1 esv1696369 1 120916540 120916540 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4098034 M 2 1 0 "" HuRef nsv547635 1 120949468 121038500 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723031 M 17421 1 0 EMBP1 nsv946206 1 120973542 120982260 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786146,nssv1786528,nssv1786132,nssv1786197,nssv1786208,nssv1786194,nssv1786147,nssv1786204,nssv1786137,nssv1786154,nssv1786213,nssv1786188,nssv1786207,nssv1786162,nssv1786205,nssv1786167,nssv1786142,nssv1786191,nssv1786149,nssv1786170,nssv1786134,nssv1786161,nssv1786143,nssv1786523,nssv1786157,nssv1786527,nssv1786156,nssv1786532,nssv1786212,nssv1786165,nssv1786139,nssv1786173,nssv1786153,nssv1786203,nssv1786130,nssv1786199,nssv1786145,nssv1786201,nssv1786135,nssv1786196,nssv1786150,nssv1786530,nssv1786144,nssv1786166,nssv1786206,nssv1786183,nssv1786129,nssv1786192,nssv1786152,nssv1786182,nssv1786148,nssv1786180,nssv1786159,nssv1786169,nssv1786209,nssv1786186,nssv1786522,nssv1786176,nssv1786131,nssv1786128,nssv1786133,nssv1786524,nssv1786141,nssv1786160,nssv1786210,nssv1786185,nssv1786138,nssv1786179,nssv1786140,nssv1786526,nssv1786136,nssv1786195,nssv1786211,nssv1786531,nssv1786158,nssv1786184,nssv1786177,nssv1786189,nssv1786181,nssv1786200,nssv1786525,nssv1786202,nssv1786190,nssv1786187,nssv1786155,nssv1786198,nssv1786171,nssv1786163,nssv1786193,nssv1786164,nssv1786151,nssv1786172,nssv1786178,nssv1786529,nssv1786168,nssv1786175,nssv1786174 M 97 10 0 EMBP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1012172 1 121040459 121184490 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492753 M 29084 1 0 "" esv3450901 1 121043052 121043750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691770 M 185 1 0 "" NA19238 esv26616 1 121051719 121186717 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17940,esv12704,esv13553,esv14098 M 40 23 0 "" NA06985,NA07037,NA07045,NA11894,NA11931,NA11995,NA12006,NA12044,NA12239,NA12287,NA12414,NA12776,NA15510,NA18502,NA18505,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19225,NA19240 esv2593122 1 121054429 121057333 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5174412 M 1 0 1 "" NA18507 esv6533 1 121055666 121057655 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28974 M 1 0 0 "" esv5873 1 121056661 121061611 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28314 M 1 0 0 "" esv6391 1 121057269 121058981 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28832 M 1 0 0 "" esv4790 1 121057645 121183495 OTHER complex Wang_et_al_2008 18987735 Sequencing essv27231 M 1 0 0 "" YH esv3424617 1 121059292 121059292 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863752,essv7863751 M 185 2 0 "" NA07346,NA11992 esv9701 1 121059540 121087887 CNV loss Ahn_et_al_2009 19470904 Sequencing essv32142 M 1 0 0 "" nsv436809 1 121070536 121078284 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466295 M 2 1 0 "" NA18505 nsv1011065 1 121137730 121184490 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486265,nssv3487834,nssv3702084,nssv3702083,nssv3502102,nssv3491258,nssv3501172 M 29084 7 0 "" esv8082 1 121143962 121184913 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30523 M 1 0 0 "" esv3367136 1 121145052 121159050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691771 M 185 1 0 "" NA19240 nsv436749 1 121173022 121175448 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466328 M 2 1 0 "" NA18505 nsv436002 1 121176554 121180185 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466339 M 2 1 0 "" NA15510 esv6938 1 121176554 121185357 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29379 M 1 0 0 "" nsv547636 1 121177759 121186686 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723034,nssv723033,nssv723032 M 17421 3 0 "" nsv547637 1 121180077 121186198 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723035 M 17421 0 1 "" esv8020 1 121180116 121184934 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30461 M 1 0 0 "" nsv436029 1 121182435 121184678 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466350 M 2 1 0 "" NA15510 nsv547638 1 121182682 121186686 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723036 M 17421 0 1 "" esv3444050 1 121183013 121183522 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808892 M 185 1 0 "" NA12878 esv2447499 1 121183135 121183470 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5203576 M 1 0 1 "" NA18507 esv3365290 1 121184387 121184878 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808893 M 185 1 0 "" NA12878 nsv435931 1 121184933 121185222 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466362 M 2 1 0 "" NA15510 esv2572262 1 121185138 121185590 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5384957 M 1 0 1 "" NA18507 nsv547639 1 121185832 121186406 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723037 M 17421 0 1 "" nsv547640 1 121185832 121186686 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723041,nssv723040,nssv723039,nssv723038,nssv723042 M 17421 4 1 "" esv6911 1 121185847 121186024 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29352 M 1 0 0 "" dgv528n54 1 121185883 121186686 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547641,nsv547642,nsv547643 M 17421 5 0 "" esv6045 1 121185923 121186957 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28486 M 1 0 0 "" esv7712 1 121186004 121186171 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30153 M 1 0 0 "" esv3368930 1 121186110 121186626 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808894 M 185 1 0 "" NA12878 nsv547644 1 121186198 121186686 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723048 M 17421 1 0 "" esv3346216 1 121186232 121186234 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863755,essv7863753 M 185 2 0 "" NA18871,NA18953 esv4181 1 121186329 121186874 OTHER complex Wang_et_al_2008 18987735 Sequencing essv26622 M 1 0 0 "" YH esv9319 1 121186354 121186489 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31760 M 1 0 0 "" esv2543522 1 121186370 121186708 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5302426 M 1 1 0 "" NA18507 dgv4n16 1 121186433 121186651 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436779,nsv435930 M 2 2 0 "" NA15510,NA18505 nsv436018 1 121186559 121186683 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466395 M 2 1 0 "" NA15510 esv6525 1 121186585 121186757 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28966 M 1 0 0 "" esv8614 1 121186671 121186824 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31055 M 1 0 0 "" esv3446469 1 121186676 121186695 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678332 M 185 1 0 "" NA12878 esv3445810 1 121186695 121186714 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596323 M 185 1 0 "" NA12815 esv4364 1 121186759 121186814 OTHER complex Wang_et_al_2008 18987735 Sequencing essv26805 M 1 0 0 "" YH esv3306041 1 121186780 121186781 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768198,essv7763627 M 185 2 0 "" NA12878,NA19143 nsv945596 1 141476697 141507526 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574192,nssv2574199,nssv2574191,nssv2574226,nssv2574185,nssv2574187,nssv2574229,nssv2574193,nssv2574206,nssv2574201,nssv2574186,nssv2574205,nssv2574208,nssv2574232,nssv2574197,nssv2574231,nssv2574228,nssv2574216,nssv2574207,nssv2574213,nssv2574225,nssv2574230,nssv2574184,nssv2574217,nssv2574196,nssv2574219,nssv2574209,nssv2574214,nssv2574198,nssv2574195,nssv2574221,nssv2574215,nssv2574188,nssv2574204,nssv2574218,nssv2574202,nssv2574222,nssv2574211,nssv2574220,nssv2574223,nssv2574203,nssv2574212,nssv2574227,nssv2574194,nssv2574183,nssv2574224,nssv2574210,nssv2574200 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv7690 1 141477000 141482467 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30131 M 1 0 0 "" esv5714 1 141477029 141479031 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28155 M 1 0 0 "" esv22640 1 141477044 141484457 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10912,esv18679 M 40 0 19 "" NA11995,NA12004,NA12239,NA12287,NA12749,NA12878,NA18505,NA18508,NA18511,NA18517,NA18523,NA18861,NA18907,NA18916,NA19099,NA19147,NA19190,NA19225,NA19240 esv2595904 1 141477080 141480041 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5385825 M 1 0 1 "" NA18507 esv6966 1 141477276 141477463 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29407 M 1 0 0 "" esv6312 1 141479118 141480037 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28753 M 1 0 0 "" esv3446025 1 141479120 141479135 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863759,essv7863761,essv7863760 M 185 3 0 "" NA18520,NA18953,NA19172 esv5740 1 141479497 141479679 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28181 M 1 0 0 "" esv7944 1 141479777 141482609 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30385 M 1 0 0 "" esv3389047 1 141480362 141480387 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863763,essv7863762 M 185 2 0 "" NA18486,NA18953 esv3433632 1 141480411 141480434 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863764 M 185 1 0 "" NA19172 esv7736 1 141481606 141483808 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30177 M 1 0 0 "" esv8914 1 141481781 141482849 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31355 M 1 0 0 "" dgv5n16 1 141482868 141906719 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv435946,nsv435945,nsv436651 M 2 0 0 ANKRD20A12P NA15510,NA18505 esv3435677 1 141486373 141486392 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596335 M 185 1 0 "" NA12287 esv3359765 1 141498513 141504839 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808897 M 185 0 0 "" NA12878 nsv945598 1 141507526 141563335 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575137,nssv2575168,nssv2575133,nssv2575161,nssv2575138,nssv2574235,nssv2575140,nssv2575162,nssv2575177,nssv2575171,nssv2575165,nssv2575159,nssv2575174,nssv2575142,nssv2575148,nssv2575167,nssv2575147,nssv2575176,nssv2575160,nssv2575155,nssv2575164,nssv2575139,nssv2575136,nssv2575169,nssv2575151,nssv2575172,nssv2575146,nssv2575134,nssv2575158,nssv2575144,nssv2575175,nssv2575135,nssv2575149,nssv2575157,nssv2575145,nssv2575173,nssv2575156,nssv2575143,nssv2575166,nssv2574234,nssv2575170,nssv2575150,nssv2575178,nssv2575152,nssv2575163,nssv2575141,nssv2575153,nssv2575154 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3435679 1 141522023 141522049 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740921 M 185 1 0 "" NA12878 esv1004001 1 141531158 141531158 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580798 M 3 1 0 "" HuRef dgv170e59 1 141532652 141548250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3399276,esv3346436 M 185 2 0 "" NA19238,NA19240 esv3326108 1 141548852 141551650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691787 M 185 1 0 "" NA19239 esv3353101 1 141552152 141553950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691788 M 185 1 0 "" NA19240 dgv529n54 1 141554080 141628591 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547645,nsv547646 M 17421 2 0 "" esv3345965 1 141555952 141556550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691789 M 185 1 0 "" NA19239 esv3347776 1 141555952 141557450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691790 M 185 1 0 "" NA19238 esv3368466 1 141557052 141572150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691791 M 185 1 0 "" NA19239 esv3402709 1 141558066 141558095 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863766,essv7863767 M 185 2 0 "" NA11992,NA18522 dgv171e59 1 141559852 141569850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3365273,esv3349155 M 185 2 0 "" NA19238,NA19240 nsv945599 1 141563335 141604895 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575181,nssv2575204,nssv2575186,nssv2575201,nssv2575189,nssv2575192,nssv2575185,nssv2573265,nssv2575184,nssv2573267,nssv2575196,nssv2573262,nssv2573273,nssv2575195,nssv2575187,nssv2575197,nssv2575199,nssv2575191,nssv2573268,nssv2575180,nssv2575194,nssv2575203,nssv2573279,nssv2573263,nssv2575190,nssv2575200,nssv2575193,nssv2575182,nssv2573274,nssv2573280,nssv2573271,nssv2573281,nssv2575179,nssv2575183,nssv2573269,nssv2573276,nssv2573266,nssv2573270,nssv2573275,nssv2575198,nssv2575205,nssv2575207,nssv2573272,nssv2575206,nssv2573278,nssv2575202,nssv2573277,nssv2573264 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3411850 1 141572752 141600350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691794 M 185 1 0 "" NA19239 dgv172e59 1 141574152 141583750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3417414,esv3379278 M 185 2 0 "" NA19238,NA19240 nsv436812 1 141581532 141974352 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466439 M 2 1 0 ANKRD20A12P NA18505 nsv946207 1 141583743 141671016 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786547,nssv1787640,nssv1786551,nssv1786585,nssv1786537,nssv1786574,nssv1787663,nssv1786573,nssv1787657,nssv1786581,nssv1787661,nssv1787673,nssv1786536,nssv1786569,nssv1786542,nssv1786565,nssv1787658,nssv1786560,nssv1786543,nssv1787646,nssv1787659,nssv1786590,nssv1786561,nssv1787653,nssv1787662,nssv1786589,nssv1786554,nssv1787647,nssv1786540,nssv1787656,nssv1786564,nssv1787644,nssv1786549,nssv1787641,nssv1786535,nssv1787652,nssv1787660,nssv1786584,nssv1786552,nssv1786579,nssv1786548,nssv1787643,nssv1786550,nssv1787667,nssv1787664,nssv1786556,nssv1787666,nssv1786563,nssv1786557,nssv1786586,nssv1786555,nssv1786582,nssv1786553,nssv1786583,nssv1786539,nssv1786568,nssv1786534,nssv1787669,nssv1786558,nssv1786576,nssv1786545,nssv1786575,nssv1786538,nssv1786567,nssv1786562,nssv1786577,nssv1786544,nssv1787648,nssv1786546,nssv1787676,nssv1787665,nssv1787672,nssv1786541,nssv1787642,nssv1786591,nssv1786580,nssv1786559,nssv1787654,nssv1787674,nssv1787675,nssv1787645,nssv1786588,nssv1786570,nssv1787671,nssv1787650,nssv1786566,nssv1787651,nssv1786533,nssv1786578,nssv1786571,nssv1787670,nssv1787655,nssv1787668,nssv1786587,nssv1786592,nssv1786572,nssv1787649 M 97 10 0 ANKRD20A12P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv6n16 1 141588805 142076541 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436410,nsv436337,nsv436099 M 2 0 1 ANKRD20A12P NA18505 esv3445563 1 141595417 141595418 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863768,essv7863769 M 185 2 0 "" NA07346,NA18853 esv28975 1 141599178 141672515 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11848,esv21278,esv20736 M 40 4 2 ANKRD20A12P NA06985,NA12006,NA12828,NA18523,NA19099,NA19108 nsv945603 1 141604895 141638999 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573289,nssv2574250,nssv2573285,nssv2574236,nssv2573290,nssv2574242,nssv2573303,nssv2573311,nssv2574245,nssv2574251,nssv2573302,nssv2574240,nssv2574241,nssv2574239,nssv2573295,nssv2573294,nssv2573284,nssv2573283,nssv2574254,nssv2573308,nssv2573309,nssv2573288,nssv2573301,nssv2574243,nssv2574237,nssv2573307,nssv2573310,nssv2574244,nssv2573298,nssv2573304,nssv2574247,nssv2574246,nssv2574248,nssv2574238,nssv2574252,nssv2573287,nssv2573292,nssv2574249,nssv2573306,nssv2573296,nssv2573305,nssv2573286,nssv2573297,nssv2573291,nssv2574253,nssv2573300,nssv2573293,nssv2573299 M 97 10 0 ANKRD20A12P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv173e59 1 141606752 141620250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3418331,esv3327079 M 185 2 0 "" NA19238,NA19240 nsv547647 1 141617883 141618955 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723051 M 17421 0 1 "" nsv547648 1 141618023 141631395 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723052 M 17421 0 1 "" esv3345436 1 141637952 141672450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691800 M 185 1 0 ANKRD20A12P NA19238 nsv945605 1 141638999 141641379 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574265,nssv2574283,nssv2574258,nssv2574278,nssv2574262,nssv2574268,nssv2574263,nssv2574270,nssv2574276,nssv2574299,nssv2574266,nssv2574261,nssv2574279,nssv2574260,nssv2574257,nssv2574298,nssv2574294,nssv2574284,nssv2574288,nssv2574271,nssv2574256,nssv2574274,nssv2574289,nssv2574292,nssv2574302,nssv2574281,nssv2574264,nssv2574269,nssv2574273,nssv2574286,nssv2574287,nssv2574291,nssv2574290,nssv2574282,nssv2574303,nssv2574285,nssv2574280,nssv2574300,nssv2574277,nssv2574301,nssv2574293,nssv2574267,nssv2574296,nssv2574272,nssv2574295,nssv2574275,nssv2574259,nssv2574297 M 97 10 0 ANKRD20A12P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945606 1 141640879 141641379 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574306,nssv2574304,nssv2574311,nssv2574305,nssv2574310,nssv2574308,nssv2574313,nssv2574314,nssv2574312,nssv2574307,nssv2574309 M 97 10 0 ANKRD20A12P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945607 1 141641976 141651295 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574321,nssv2574337,nssv2574324,nssv2574333,nssv2574317,nssv2574325,nssv2574322,nssv2574355,nssv2574357,nssv2574354,nssv2574350,nssv2574339,nssv2574353,nssv2574359,nssv2574328,nssv2574335,nssv2574323,nssv2574352,nssv2574348,nssv2574329,nssv2574334,nssv2574362,nssv2574360,nssv2574327,nssv2574318,nssv2574332,nssv2574347,nssv2574320,nssv2574356,nssv2574346,nssv2574343,nssv2574344,nssv2574336,nssv2574316,nssv2574319,nssv2574358,nssv2574340,nssv2574341,nssv2574345,nssv2574338,nssv2574361,nssv2574326,nssv2574342,nssv2574315,nssv2574330,nssv2574351,nssv2574331,nssv2574349 M 97 10 0 ANKRD20A12P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945608 1 141645884 141651295 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574371,nssv2574396,nssv2574392,nssv2574408,nssv2574437,nssv2574417,nssv2574383,nssv2574397,nssv2574440,nssv2574413,nssv2574380,nssv2574415,nssv2574370,nssv2574363,nssv2574384,nssv2574429,nssv2574387,nssv2574400,nssv2574385,nssv2574423,nssv2574435,nssv2574426,nssv2574365,nssv2574430,nssv2574369,nssv2574404,nssv2574372,nssv2574409,nssv2574394,nssv2574420,nssv2574376,nssv2574421,nssv2574434,nssv2574403,nssv2574374,nssv2574398,nssv2574379,nssv2574410,nssv2574381,nssv2574405,nssv2574377,nssv2574411,nssv2574439,nssv2574406,nssv2574441,nssv2574390,nssv2574375,nssv2574428,nssv2574438,nssv2574419,nssv2574368,nssv2574407,nssv2574366,nssv2574418,nssv2574433,nssv2574414,nssv2574364,nssv2574393,nssv2574436,nssv2574416,nssv2574391,nssv2574422,nssv2574367,nssv2574432,nssv2574378,nssv2574425,nssv2574373,nssv2574412,nssv2574442,nssv2574388,nssv2574382,nssv2574402,nssv2574389,nssv2574427,nssv2574386,nssv2574431,nssv2574424,nssv2574399,nssv2574395,nssv2574401 M 97 10 0 ANKRD20A12P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945609 1 141651295 141659017 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574449,nssv2574490,nssv2574445,nssv2574446,nssv2574450,nssv2574456,nssv2574452,nssv2574460,nssv2574467,nssv2574453,nssv2574481,nssv2574488,nssv2574479,nssv2574461,nssv2574483,nssv2574471,nssv2574474,nssv2574459,nssv2574443,nssv2574457,nssv2574489,nssv2574447,nssv2574464,nssv2574477,nssv2574487,nssv2574486,nssv2574476,nssv2574485,nssv2574451,nssv2574473,nssv2574463,nssv2574462,nssv2574478,nssv2574455,nssv2574472,nssv2574469,nssv2574458,nssv2574468,nssv2574484,nssv2574444,nssv2574475,nssv2574482,nssv2574466,nssv2574454,nssv2574470,nssv2574448,nssv2574465,nssv2574480 M 97 10 0 ANKRD20A12P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv174e59 1 141658052 141672450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3401492,esv3414799 M 185 2 0 "" NA12878,NA12891 nsv945611 1 141659017 141660768 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574499,nssv2574507,nssv2574494,nssv2574517,nssv2574501,nssv2574524,nssv2574498,nssv2574506,nssv2574540,nssv2574534,nssv2574502,nssv2574521,nssv2574533,nssv2574539,nssv2574526,nssv2574495,nssv2574510,nssv2574529,nssv2574522,nssv2574504,nssv2574535,nssv2574509,nssv2574515,nssv2574518,nssv2574530,nssv2574514,nssv2574536,nssv2574505,nssv2574527,nssv2574508,nssv2574492,nssv2574531,nssv2574493,nssv2574516,nssv2574500,nssv2574497,nssv2574512,nssv2574528,nssv2574496,nssv2574503,nssv2574538,nssv2574519,nssv2574511,nssv2574537,nssv2574525,nssv2574523,nssv2574520,nssv2574513,nssv2574532 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945613 1 141660768 141661490 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575482,nssv2574543,nssv2575462,nssv2575444,nssv2575443,nssv2575447,nssv2575456,nssv2575445,nssv2575454,nssv2575470,nssv2575478,nssv2575451,nssv2575465,nssv2575469,nssv2575472,nssv2575460,nssv2574542,nssv2574541,nssv2575484,nssv2575485,nssv2575483,nssv2575466,nssv2575475,nssv2575486,nssv2575459,nssv2575477,nssv2575473,nssv2575453,nssv2575468,nssv2575458,nssv2575474,nssv2575448,nssv2575457,nssv2575450,nssv2575463,nssv2575471,nssv2575479,nssv2575452,nssv2575476,nssv2575467,nssv2575446,nssv2575449,nssv2575480,nssv2575455,nssv2575441,nssv2575464,nssv2575442,nssv2575481,nssv2575461 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945614 1 141661490 141664932 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575493,nssv2575520,nssv2575489,nssv2575516,nssv2575494,nssv2575518,nssv2575496,nssv2575506,nssv2575523,nssv2575488,nssv2575501,nssv2575533,nssv2575497,nssv2575514,nssv2575531,nssv2575524,nssv2575511,nssv2575534,nssv2575507,nssv2575503,nssv2575527,nssv2575519,nssv2575510,nssv2575499,nssv2575502,nssv2575521,nssv2575529,nssv2575513,nssv2575522,nssv2575517,nssv2575528,nssv2575530,nssv2575495,nssv2575512,nssv2575509,nssv2575491,nssv2575505,nssv2575508,nssv2575492,nssv2575504,nssv2575500,nssv2575490,nssv2575487,nssv2575526,nssv2575532,nssv2575498,nssv2575515,nssv2575525 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945615 1 141664932 141668320 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575555,nssv2571355,nssv2575552,nssv2575560,nssv2575554,nssv2571352,nssv2575610,nssv2571346,nssv2575548,nssv2571342,nssv2575563,nssv2575595,nssv2575537,nssv2575576,nssv2575536,nssv2571341,nssv2575624,nssv2575570,nssv2575539,nssv2571340,nssv2575614,nssv2571348,nssv2575606,nssv2571349,nssv2575544,nssv2575561,nssv2575605,nssv2571337,nssv2575612,nssv2575623,nssv2575547,nssv2575565,nssv2575550,nssv2575601,nssv2575543,nssv2575571,nssv2575609,nssv2575577,nssv2575564,nssv2575631,nssv2575538,nssv2575587,nssv2575559,nssv2571336,nssv2575556,nssv2575626,nssv2575566,nssv2575625,nssv2575611,nssv2575582,nssv2575621,nssv2575638,nssv2575617,nssv2575562,nssv2575551,nssv2575584,nssv2575540,nssv2571345,nssv2575622,nssv2575574,nssv2575545,nssv2575598,nssv2575613,nssv2575588,nssv2575546,nssv2575579,nssv2575607,nssv2575632,nssv2575553,nssv2575568,nssv2575541,nssv2575572,nssv2575549,nssv2575596,nssv2575557,nssv2575630,nssv2575608,nssv2575633,nssv2575542,nssv2571359,nssv2575558,nssv2575636,nssv2571344,nssv2575604,nssv2575591,nssv2571357,nssv2575620,nssv2575589,nssv2575637,nssv2575627,nssv2575578,nssv2575599,nssv2571356,nssv2575590,nssv2575635,nssv2571354,nssv2575581,nssv2575585,nssv2571358,nssv2575628,nssv2575615,nssv2575618,nssv2575603,nssv2575592,nssv2575629,nssv2575600,nssv2575535,nssv2571335,nssv2575573,nssv2571353,nssv2571351,nssv2575616,nssv2575597,nssv2575580,nssv2575634,nssv2571338,nssv2575569,nssv2571347,nssv2575575,nssv2575583,nssv2575567,nssv2571343,nssv2575602,nssv2575594,nssv2571334,nssv2575586,nssv2575593,nssv2575619 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945616 1 141668320 141668938 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571451,nssv2571412,nssv2571384,nssv2571454,nssv2571444,nssv2572393,nssv2571446,nssv2571406,nssv2571375,nssv2572404,nssv2571378,nssv2571404,nssv2571368,nssv2571431,nssv2571364,nssv2572411,nssv2571440,nssv2571419,nssv2571365,nssv2571430,nssv2571385,nssv2571360,nssv2571437,nssv2571435,nssv2571387,nssv2571409,nssv2571366,nssv2572416,nssv2571395,nssv2572414,nssv2571382,nssv2572415,nssv2571445,nssv2571399,nssv2571379,nssv2571413,nssv2571380,nssv2572410,nssv2571371,nssv2572408,nssv2571441,nssv2571428,nssv2571392,nssv2571461,nssv2571458,nssv2572405,nssv2571367,nssv2571400,nssv2571442,nssv2571459,nssv2571447,nssv2571410,nssv2571374,nssv2572394,nssv2571370,nssv2571457,nssv2571376,nssv2571425,nssv2571443,nssv2571398,nssv2571391,nssv2571408,nssv2571439,nssv2572420,nssv2571377,nssv2571418,nssv2571381,nssv2571407,nssv2571363,nssv2572398,nssv2571456,nssv2571422,nssv2571373,nssv2571403,nssv2571362,nssv2571421,nssv2571369,nssv2571396,nssv2571455,nssv2571433,nssv2571415,nssv2571434,nssv2572409,nssv2571390,nssv2571452,nssv2572402,nssv2571448,nssv2572392,nssv2571462,nssv2572400,nssv2572422,nssv2572421,nssv2571402,nssv2572418,nssv2571432,nssv2572390,nssv2571389,nssv2572397,nssv2571401,nssv2571411,nssv2571417,nssv2572396,nssv2571426,nssv2572391,nssv2571388,nssv2571429,nssv2571423,nssv2572403,nssv2571453,nssv2572423,nssv2571450,nssv2571463,nssv2571386,nssv2571414,nssv2571393,nssv2572424,nssv2571436,nssv2572412,nssv2571424,nssv2572401,nssv2572413,nssv2572419,nssv2572389,nssv2572407,nssv2572388,nssv2572399,nssv2571420,nssv2571397 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1917300 1 141668813 141669728 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4807359 M 1 0 1 "" NA18507 nsv945617 1 141668938 141671016 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572504,nssv2572559,nssv2572435,nssv2572468,nssv2572444,nssv2572534,nssv2572515,nssv2572545,nssv2572440,nssv2572540,nssv2572512,nssv2572463,nssv2572447,nssv2572554,nssv2572448,nssv2572537,nssv2572511,nssv2572518,nssv2572510,nssv2572536,nssv2572509,nssv2572539,nssv2572431,nssv2572535,nssv2572506,nssv2572425,nssv2572436,nssv2572556,nssv2572508,nssv2572477,nssv2572523,nssv2572522,nssv2572452,nssv2572485,nssv2572437,nssv2572478,nssv2572442,nssv2572542,nssv2572456,nssv2572454,nssv2572507,nssv2572555,nssv2572457,nssv2572465,nssv2572446,nssv2572455,nssv2572438,nssv2572543,nssv2572503,nssv2572533,nssv2572441,nssv2572495,nssv2572445,nssv2572563,nssv2572433,nssv2572489,nssv2572520,nssv2572497,nssv2572429,nssv2572479,nssv2572434,nssv2572471,nssv2572521,nssv2572480,nssv2572449,nssv2572470,nssv2572443,nssv2572514,nssv2572459,nssv2572498,nssv2572426,nssv2572500,nssv2572502,nssv2572484,nssv2572430,nssv2572473,nssv2572432,nssv2572482,nssv2572427,nssv2572529,nssv2572486,nssv2572552,nssv2572557,nssv2572451,nssv2572564,nssv2572475,nssv2572519,nssv2572513,nssv2572526,nssv2572469,nssv2572517,nssv2572565,nssv2572562,nssv2572558,nssv2572541,nssv2572462,nssv2572561,nssv2572546,nssv2572551,nssv2572493,nssv2572547,nssv2572458,nssv2572460,nssv2572530,nssv2572476,nssv2572474,nssv2572524,nssv2572491,nssv2572453,nssv2572525,nssv2572531,nssv2572528,nssv2572481,nssv2572467,nssv2572490,nssv2572464,nssv2572553,nssv2572492,nssv2572499,nssv2572544,nssv2572548,nssv2572488,nssv2572496,nssv2572532,nssv2572550,nssv2572501,nssv2572466,nssv2572487 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv3n82 1 141722393 141734519 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv945618,nsv946208 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv175e59 1 141722552 141822050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3360256,esv3336914 M 185 2 0 "" NA19238,NA19239 dgv176e59 1 141722552 141909250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3377238,esv3330809,esv3447685 M 185 3 0 "" NA12878,NA12891,NA19240 esv22446 1 141722575 141733274 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11144,esv12067 M 40 0 2 "" NA06985,NA18916 nsv435970 1 141726101 142096907 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466484 M 2 0 0 "" NA15510 nsv436010 1 141732038 141739216 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466495 M 2 1 0 "" NA15510 nsv436371 1 141732168 141749558 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466506 M 2 0 1 "" NA18505 esv28428 1 141734095 141795410 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10602,esv17988 M 40 3 0 "" NA18523,NA19099,NA19108 nsv946209 1 141734519 141738008 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787792,nssv1787774,nssv1787852,nssv2572668,nssv1787848,nssv1787832,nssv1787777,nssv2572656,nssv1787778,nssv1787797,nssv1787793,nssv1787806,nssv1787853,nssv2572667,nssv1787850,nssv2572653,nssv1787783,nssv2572643,nssv1787786,nssv1787821,nssv1787802,nssv1787817,nssv1787845,nssv2572660,nssv1787849,nssv2572634,nssv1787785,nssv1787820,nssv1787844,nssv1787824,nssv1787789,nssv1787840,nssv1787846,nssv1787843,nssv2572628,nssv2572621,nssv2572630,nssv2572641,nssv1787780,nssv2572640,nssv1787781,nssv1787801,nssv1787805,nssv2572664,nssv1787784,nssv2572663,nssv1787776,nssv2572651,nssv1787851,nssv1787814,nssv1787803,nssv1787829,nssv1787791,nssv1787834,nssv1787787,nssv2572672,nssv1787798,nssv1787827,nssv1787790,nssv1787823,nssv1787795,nssv2572636,nssv1787794,nssv1787810,nssv1787788,nssv2572666,nssv1787775,nssv1787838,nssv2572627,nssv1787816,nssv1787799,nssv1787809,nssv2572622,nssv2572639,nssv1787796,nssv1787831,nssv1787779,nssv1787841,nssv1787782,nssv1787811,nssv1787847,nssv2572671,nssv1787826,nssv2572642,nssv2572650,nssv2572623,nssv1787804,nssv2572657,nssv1787825,nssv2572638,nssv2572662,nssv2572654,nssv1787807,nssv2572645,nssv1787833,nssv1787835,nssv2572652,nssv1787842,nssv2572646,nssv1787808,nssv1787830,nssv1787800,nssv1787818,nssv2572644,nssv1787812,nssv2572624,nssv2572620,nssv2572655,nssv2572633,nssv1787813,nssv2572669,nssv2572635,nssv2572649,nssv1787837,nssv1787828,nssv2572631,nssv2572647,nssv1787819,nssv1787822,nssv2572661,nssv2572629,nssv2572665,nssv1787836,nssv2572619,nssv1787815,nssv1787839,nssv2572632,nssv2572625,nssv2572658 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945620 1 141738008 141747663 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572680,nssv2573623,nssv2572676,nssv2572678,nssv2572684,nssv2572686,nssv2572682,nssv2573635,nssv2573622,nssv2573633,nssv2572677,nssv2573639,nssv2573650,nssv2572683,nssv2573637,nssv2573629,nssv2573645,nssv2572691,nssv2572687,nssv2573628,nssv2573646,nssv2573648,nssv2573630,nssv2573640,nssv2572693,nssv2572685,nssv2573636,nssv2573632,nssv2572675,nssv2572674,nssv2573644,nssv2573625,nssv2573624,nssv2573620,nssv2572694,nssv2572695,nssv2572690,nssv2572688,nssv2573642,nssv2573621,nssv2573647,nssv2573634,nssv2573631,nssv2573643,nssv2573641,nssv2573626,nssv2572689,nssv2572679 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946210 1 141740640 141808419 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787936,nssv1787917,nssv1787882,nssv1787890,nssv1787932,nssv1787891,nssv1787883,nssv1787902,nssv1787940,nssv1787919,nssv1787872,nssv1787942,nssv1787937,nssv1787881,nssv1787866,nssv1787944,nssv1787869,nssv1787925,nssv1787858,nssv1787945,nssv1787873,nssv1787886,nssv1787861,nssv1787920,nssv1787865,nssv1787897,nssv1787931,nssv1787854,nssv1787933,nssv1787904,nssv1787863,nssv1787924,nssv1787860,nssv1787900,nssv1787938,nssv1787914,nssv1787885,nssv1787907,nssv1787939,nssv1787894,nssv1787879,nssv1787923,nssv1787868,nssv1787903,nssv1787867,nssv1787927,nssv1787856,nssv1787941,nssv1787864,nssv1787930,nssv1787870,nssv1787912,nssv1787878,nssv1787892,nssv1787871,nssv1787887,nssv1787935,nssv1787888,nssv1787875,nssv1787877,nssv1787874,nssv1787896,nssv1787862,nssv1787918,nssv1787855,nssv1787926,nssv1787857,nssv1787889,nssv1787876,nssv1787909,nssv1787859,nssv1787928,nssv1787934,nssv1787906,nssv1787929,nssv1787884,nssv1787946,nssv1787913,nssv1787921,nssv1787880,nssv1787901,nssv1787899,nssv1787910,nssv1787922,nssv1787911,nssv1787943,nssv1787905,nssv1787893,nssv1787916,nssv1787898,nssv1788872,nssv1788873,nssv1788874,nssv1787908,nssv1787895,nssv1787915,nssv1787947 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv7n16 1 141741386 142273394 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436126,nsv435916,nsv436638 M 2 0 2 "" NA15510,NA18505 nsv945622 1 141747663 141750852 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573654,nssv2573698,nssv2573659,nssv2573665,nssv2573658,nssv2573674,nssv2573697,nssv2573680,nssv2573685,nssv2573679,nssv2573677,nssv2573652,nssv2573656,nssv2573687,nssv2573692,nssv2573686,nssv2573662,nssv2573694,nssv2573675,nssv2573673,nssv2573657,nssv2573688,nssv2573681,nssv2573699,nssv2573663,nssv2573664,nssv2573689,nssv2573667,nssv2573696,nssv2573661,nssv2573676,nssv2573701,nssv2573683,nssv2573700,nssv2573678,nssv2573684,nssv2573670,nssv2573672,nssv2573690,nssv2573695,nssv2573691,nssv2573655,nssv2573653,nssv2573703,nssv2573666,nssv2573702,nssv2573669,nssv2573668 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv436773 1 141750227 141754750 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466528 M 2 1 0 "" NA18505 nsv945625 1 141750852 141752734 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573712,nssv2573722,nssv2573713,nssv2573744,nssv2573708,nssv2573718,nssv2573731,nssv2573727,nssv2573716,nssv2573740,nssv2573755,nssv2573749,nssv2573721,nssv2573742,nssv2573745,nssv2573725,nssv2573719,nssv2573752,nssv2573751,nssv2573753,nssv2573732,nssv2573728,nssv2573738,nssv2573739,nssv2573741,nssv2573756,nssv2573729,nssv2573706,nssv2573710,nssv2573711,nssv2573720,nssv2573743,nssv2573709,nssv2573734,nssv2573757,nssv2573723,nssv2573730,nssv2573747,nssv2573746,nssv2573735,nssv2573717,nssv2573750,nssv2573714,nssv2573733,nssv2573724,nssv2573736,nssv2573754,nssv2573707 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945626 1 141752734 141757569 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573766,nssv2572072,nssv2573765,nssv2573313,nssv2573764,nssv2572043,nssv2573780,nssv2572055,nssv2573771,nssv2572040,nssv2573779,nssv2572071,nssv2573316,nssv2572067,nssv2573768,nssv2572057,nssv2572042,nssv2572062,nssv2573772,nssv2572038,nssv2573319,nssv2572052,nssv2572041,nssv2572069,nssv2573315,nssv2572050,nssv2573782,nssv2572046,nssv2573318,nssv2572056,nssv2573778,nssv2572061,nssv2573323,nssv2573758,nssv2573775,nssv2572058,nssv2572037,nssv2572036,nssv2573762,nssv2572079,nssv2572044,nssv2572045,nssv2573324,nssv2572047,nssv2573769,nssv2572059,nssv2573317,nssv2572076,nssv2573321,nssv2573314,nssv2573760,nssv2572068,nssv2573783,nssv2572048,nssv2573763,nssv2572049,nssv2573322,nssv2572066,nssv2573320,nssv2572051,nssv2573777,nssv2573312,nssv2573773,nssv2572074,nssv2573776,nssv2572078,nssv2573767,nssv2572060,nssv2573774,nssv2572064,nssv2573761,nssv2572053,nssv2572054,nssv2572077,nssv2572075,nssv2572070,nssv2572039,nssv2572063,nssv2572065,nssv2572073 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945627 1 141752734 141761216 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573331,nssv2573367,nssv2573332,nssv2573344,nssv2573327,nssv2573336,nssv2573339,nssv2573337,nssv2573368,nssv2573329,nssv2573371,nssv2573343,nssv2573359,nssv2573352,nssv2573335,nssv2573345,nssv2573360,nssv2573326,nssv2573365,nssv2573349,nssv2573340,nssv2573338,nssv2573369,nssv2573351,nssv2573354,nssv2573357,nssv2573348,nssv2573328,nssv2573350,nssv2573330,nssv2573346,nssv2573358,nssv2573325,nssv2573341,nssv2573356,nssv2573364,nssv2573363,nssv2573355,nssv2573370,nssv2573361,nssv2573334,nssv2573342,nssv2573347,nssv2573366,nssv2573372,nssv2573362,nssv2573333,nssv2573353 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945629 1 141761216 141763660 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573380,nssv2573408,nssv2573381,nssv2573414,nssv2573376,nssv2573411,nssv2573385,nssv2573399,nssv2573390,nssv2573416,nssv2573403,nssv2573397,nssv2573421,nssv2573396,nssv2573378,nssv2573417,nssv2573379,nssv2573400,nssv2573389,nssv2573386,nssv2573388,nssv2573410,nssv2573407,nssv2573392,nssv2573419,nssv2573391,nssv2573405,nssv2573393,nssv2573398,nssv2573394,nssv2573404,nssv2573382,nssv2573418,nssv2573395,nssv2573401,nssv2573412,nssv2573374,nssv2573413,nssv2573402,nssv2573384,nssv2573406,nssv2573387,nssv2573420,nssv2573415,nssv2573409,nssv2573375,nssv2573377,nssv2573383 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945631 1 141763660 141767345 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573430,nssv2573449,nssv2573429,nssv2573460,nssv2573425,nssv2573446,nssv2573465,nssv2573443,nssv2573453,nssv2573437,nssv2573457,nssv2573470,nssv2573454,nssv2573426,nssv2573447,nssv2573452,nssv2573433,nssv2573444,nssv2573463,nssv2573469,nssv2573431,nssv2573462,nssv2573427,nssv2573467,nssv2573434,nssv2573439,nssv2573455,nssv2573441,nssv2573423,nssv2573459,nssv2573442,nssv2573464,nssv2573468,nssv2573428,nssv2573450,nssv2573448,nssv2573461,nssv2573456,nssv2573438,nssv2573424,nssv2573458,nssv2573432,nssv2573435,nssv2573436,nssv2573440,nssv2573445,nssv2573451,nssv2573466 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945633 1 141767345 141781240 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573478,nssv2573476,nssv2573479,nssv2573507,nssv2573474,nssv2573511,nssv2573516,nssv2573505,nssv2573508,nssv2573495,nssv2573489,nssv2573486,nssv2573496,nssv2573494,nssv2573488,nssv2573502,nssv2573514,nssv2573487,nssv2573492,nssv2573490,nssv2573491,nssv2573498,nssv2573504,nssv2573515,nssv2573499,nssv2573472,nssv2573503,nssv2573481,nssv2573480,nssv2573484,nssv2573513,nssv2573510,nssv2573500,nssv2573475,nssv2573519,nssv2573473,nssv2573477,nssv2573485,nssv2573512,nssv2573518,nssv2573509,nssv2573497,nssv2573493,nssv2573483,nssv2573501,nssv2573482,nssv2573517,nssv2573506 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv8n16 1 141772390 142243755 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436021,nsv436032 M 2 1 0 "" NA15510 esv3446457 1 141777865 141777896 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740922 M 185 1 0 "" NA12878 nsv945635 1 141781240 141781958 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573522,nssv2573559,nssv2573533,nssv2573541,nssv2573526,nssv2573576,nssv2573527,nssv2573529,nssv2573537,nssv2573571,nssv2573538,nssv2573532,nssv2573531,nssv2573543,nssv2573573,nssv2573561,nssv2573575,nssv2573528,nssv2573557,nssv2573539,nssv2573554,nssv2573542,nssv2573544,nssv2573540,nssv2573530,nssv2573558,nssv2573560,nssv2573534,nssv2573548,nssv2573570,nssv2573546,nssv2573523,nssv2573569,nssv2573572,nssv2573578,nssv2573547,nssv2573535,nssv2573524,nssv2573574,nssv2573553,nssv2573563,nssv2573550,nssv2573545,nssv2573536,nssv2573552,nssv2573562,nssv2573551,nssv2573567,nssv2573568,nssv2573564,nssv2573525,nssv2573521,nssv2573556,nssv2573577,nssv2573549,nssv2573555,nssv2573566,nssv2573520,nssv2573565 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945636 1 141781958 141782458 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573585,nssv2573589,nssv2573586,nssv2573587,nssv2573581,nssv2573582,nssv2573588,nssv2573580,nssv2573584,nssv2573579,nssv2573583 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945637 1 141781958 141792128 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573592,nssv2574550,nssv2573596,nssv2574545,nssv2573597,nssv2573605,nssv2574553,nssv2573613,nssv2573604,nssv2573618,nssv2573603,nssv2573593,nssv2573607,nssv2574555,nssv2574546,nssv2574559,nssv2573600,nssv2573615,nssv2574554,nssv2573608,nssv2573591,nssv2573599,nssv2574556,nssv2574560,nssv2573594,nssv2573614,nssv2573610,nssv2573611,nssv2573595,nssv2574552,nssv2573616,nssv2574557,nssv2574547,nssv2574558,nssv2573598,nssv2574551,nssv2574549,nssv2573590,nssv2574548,nssv2573606,nssv2573609,nssv2573619,nssv2573601,nssv2573602,nssv2574561,nssv2574544,nssv2573617,nssv2573612 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv436751 1 141789447 141794792 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466550 M 2 1 0 "" NA18505 nsv945638 1 141792128 141808419 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574564,nssv2574603,nssv2574568,nssv2574563,nssv2574571,nssv2574585,nssv2574569,nssv2574604,nssv2574565,nssv2574567,nssv2574601,nssv2574595,nssv2574582,nssv2574574,nssv2574586,nssv2574575,nssv2574570,nssv2574606,nssv2574583,nssv2574607,nssv2574598,nssv2574602,nssv2574584,nssv2574566,nssv2574576,nssv2574573,nssv2574594,nssv2574587,nssv2574580,nssv2574562,nssv2574596,nssv2574605,nssv2574591,nssv2574593,nssv2574579,nssv2574589,nssv2574608,nssv2574609,nssv2574572,nssv2574577,nssv2574581,nssv2574590,nssv2574578,nssv2574592,nssv2574599,nssv2574588,nssv2574597,nssv2574600 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945639 1 141808419 141831834 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574619,nssv2574653,nssv2574616,nssv2574638,nssv2574617,nssv2574626,nssv2574612,nssv2574655,nssv2574622,nssv2574610,nssv2574621,nssv2574632,nssv2574637,nssv2574640,nssv2574636,nssv2574652,nssv2574645,nssv2574634,nssv2574625,nssv2574611,nssv2574635,nssv2574641,nssv2574654,nssv2574643,nssv2574614,nssv2574613,nssv2574618,nssv2574639,nssv2574627,nssv2574647,nssv2574649,nssv2574650,nssv2574630,nssv2574628,nssv2574644,nssv2574624,nssv2574633,nssv2574642,nssv2574615,nssv2574623,nssv2574657,nssv2574648,nssv2574629,nssv2574651,nssv2574656,nssv2574620,nssv2574646,nssv2574631 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv9n16 1 141822864 141963731 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436650,nsv435972 M 2 0 0 "" NA15510,NA18505 esv3332742 1 141823452 141909250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691809 M 185 1 0 "" NA19239 esv5913 1 141826935 141827548 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28354 M 1 0 0 "" nsv945640 1 141831834 141884623 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574660,nssv2574698,nssv2574665,nssv2574682,nssv2574664,nssv2574699,nssv2574667,nssv2574686,nssv2574689,nssv2574678,nssv2574675,nssv2574694,nssv2574691,nssv2574692,nssv2574670,nssv2574690,nssv2574669,nssv2574701,nssv2574679,nssv2574666,nssv2574683,nssv2574687,nssv2574677,nssv2574673,nssv2574705,nssv2574663,nssv2574668,nssv2574700,nssv2574680,nssv2574696,nssv2574704,nssv2574661,nssv2574672,nssv2574685,nssv2574659,nssv2574688,nssv2574695,nssv2574693,nssv2574697,nssv2574703,nssv2574684,nssv2574674,nssv2574681,nssv2574662,nssv2574702,nssv2574658,nssv2574671,nssv2574676 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv10n16 1 141862713 142368722 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436031,nsv436919,nsv436020,nsv436023 M 2 2 0 "" NA15510,NA18505 nsv945641 1 141881201 141884623 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574715,nssv2574711,nssv2574712,nssv2574707,nssv2574713,nssv2574709,nssv2574708,nssv2574716,nssv2574710,nssv2574714,nssv2574706 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945643 1 141884623 141896601 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574720,nssv2574743,nssv2574724,nssv2574733,nssv2574725,nssv2574735,nssv2574727,nssv2574750,nssv2574737,nssv2574726,nssv2574738,nssv2574753,nssv2574734,nssv2574755,nssv2574731,nssv2574754,nssv2574722,nssv2575231,nssv2574748,nssv2574718,nssv2575225,nssv2574749,nssv2575230,nssv2574723,nssv2575228,nssv2574730,nssv2574739,nssv2574732,nssv2574751,nssv2574729,nssv2574740,nssv2574744,nssv2575227,nssv2574728,nssv2574736,nssv2575232,nssv2574745,nssv2574756,nssv2574747,nssv2574752,nssv2574746,nssv2574757,nssv2575226,nssv2575229,nssv2574721,nssv2574742,nssv2574719,nssv2574741 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv436721 1 141886915 141890304 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466639 M 2 1 0 "" NA18505 nsv945644 1 141896601 141909428 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575235,nssv2575246,nssv2575240,nssv2575265,nssv2575243,nssv2575260,nssv2575241,nssv2575264,nssv2575262,nssv2575277,nssv2575278,nssv2575269,nssv2575275,nssv2575271,nssv2575256,nssv2575251,nssv2575252,nssv2575280,nssv2575242,nssv2575276,nssv2575234,nssv2575274,nssv2575238,nssv2575253,nssv2575233,nssv2575272,nssv2575267,nssv2575261,nssv2575254,nssv2575249,nssv2575259,nssv2575279,nssv2575239,nssv2575236,nssv2575268,nssv2575263,nssv2575270,nssv2575281,nssv2575266,nssv2575257,nssv2575250,nssv2575245,nssv2575244,nssv2575258,nssv2575273,nssv2575255,nssv2575247,nssv2575248 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3406915 1 141897339 141897392 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740923 M 185 1 0 "" NA12878 dgv11n16 1 141904368 142323733 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv435768,nsv435906 M 2 0 1 "" NA15510 esv997588 1 141908067 141909284 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586481 M 3 1 0 "" HuRef dgv177e59 1 141959252 141967250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3374687,esv3329791 M 185 2 0 "" NA19239,NA19240 esv999684 1 141959285 142032471 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586715 M 3 1 0 "" HuRef nsv945646 1 141959428 141976560 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575288,nssv2575304,nssv2575284,nssv2575298,nssv2575289,nssv2575282,nssv2575291,nssv2575327,nssv2575308,nssv2575292,nssv2575319,nssv2575286,nssv2575310,nssv2575328,nssv2575305,nssv2575320,nssv2575297,nssv2575326,nssv2575314,nssv2575307,nssv2575300,nssv2575290,nssv2575293,nssv2575313,nssv2575309,nssv2575287,nssv2575296,nssv2575316,nssv2575329,nssv2575317,nssv2575283,nssv2575302,nssv2575285,nssv2575303,nssv2575318,nssv2575299,nssv2575324,nssv2575315,nssv2575322,nssv2575321,nssv2575306,nssv2575295,nssv2575325,nssv2575294,nssv2575312,nssv2575323,nssv2575301,nssv2575311 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3366875 1 141966325 141966344 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678333 M 185 1 0 "" NA19240 dgv178e59 1 141970252 142012350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3398266,esv3348449,esv3332621 M 185 3 0 "" NA12892,NA19238,NA19239 esv3335999 1 141971452 141987050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691813 M 185 1 0 "" NA12891 nsv945647 1 141976560 141982509 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575336,nssv2575352,nssv2575332,nssv2575351,nssv2575337,nssv2575360,nssv2575340,nssv2575359,nssv2575376,nssv2575339,nssv2575356,nssv2575362,nssv2575377,nssv2575369,nssv2575335,nssv2575348,nssv2575373,nssv2575365,nssv2575375,nssv2575358,nssv2575330,nssv2575361,nssv2575349,nssv2575334,nssv2575345,nssv2575367,nssv2575366,nssv2575331,nssv2575341,nssv2575342,nssv2575371,nssv2575344,nssv2575343,nssv2575364,nssv2575372,nssv2575353,nssv2575374,nssv2575333,nssv2575370,nssv2575363,nssv2575378,nssv2575355,nssv2575347,nssv2575350,nssv2575354,nssv2575368,nssv2575346,nssv2575357 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946212 1 141982509 142000481 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575385,nssv2575379,nssv2575381,nssv2575400,nssv2575386,nssv2575412,nssv2575388,nssv2575392,nssv2575405,nssv2575410,nssv2575422,nssv2575390,nssv2575399,nssv2575415,nssv2575382,nssv2575407,nssv2575397,nssv2575404,nssv2575387,nssv2575426,nssv2575411,nssv2575406,nssv2575403,nssv2575420,nssv2575391,nssv2575423,nssv2575421,nssv2575384,nssv2575402,nssv2575409,nssv2575401,nssv2575416,nssv2575394,nssv2575424,nssv2575383,nssv2575380,nssv2575419,nssv2575418,nssv2575393,nssv2575425,nssv2575398,nssv2575395,nssv2575413,nssv2575414,nssv2575408,nssv2575417,nssv2575389,nssv2575396 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946211 1 141982509 142079889 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788884,nssv1788945,nssv1788960,nssv1788927,nssv1788953,nssv1788917,nssv1788957,nssv1788949,nssv1788904,nssv1788970,nssv1788889,nssv1788967,nssv1788888,nssv1788969,nssv1788900,nssv1788962,nssv1788897,nssv1788937,nssv1788881,nssv1788920,nssv1788893,nssv1788910,nssv1788879,nssv1788950,nssv1788887,nssv1788971,nssv1788958,nssv1788934,nssv1788894,nssv1788931,nssv1788878,nssv1788936,nssv1788890,nssv1788930,nssv1788961,nssv1788929,nssv1788952,nssv1788913,nssv1788954,nssv1788966,nssv1788885,nssv1788948,nssv1788891,nssv1788875,nssv1788877,nssv1788907,nssv1788956,nssv1788923,nssv1788899,nssv1788914,nssv1788959,nssv1788918,nssv1788896,nssv1788942,nssv1788955,nssv1788965,nssv1788906,nssv1788946,nssv1788883,nssv1788902,nssv1788892,nssv1788940,nssv1788876,nssv1788909,nssv1788882,nssv1788916,nssv1788886,nssv1788968,nssv1788903,nssv1788898,nssv1788895,nssv1788905,nssv1788880,nssv1788911,nssv1788944,nssv1788912,nssv1788928,nssv1788932,nssv1788933,nssv1788951,nssv1788921,nssv1788939,nssv1788943,nssv1788935,nssv1788964,nssv1788922,nssv1788926,nssv1788925,nssv1788901,nssv1788919,nssv1788938,nssv1788947,nssv1788963,nssv1788908,nssv1788941,nssv1788915,nssv1788924 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3451756 1 141991952 142011450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691816 M 185 1 0 "" NA12891 nsv945649 1 142000481 142000981 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575435,nssv2575920,nssv2575434,nssv2575908,nssv2575437,nssv2575902,nssv2575430,nssv2575428,nssv2575906,nssv2575896,nssv2575898,nssv2575917,nssv2575885,nssv2575432,nssv2575913,nssv2575895,nssv2575893,nssv2575915,nssv2575429,nssv2575900,nssv2575438,nssv2575886,nssv2575903,nssv2575891,nssv2575894,nssv2575433,nssv2575909,nssv2575897,nssv2575919,nssv2575890,nssv2575905,nssv2575916,nssv2575889,nssv2575904,nssv2575884,nssv2575431,nssv2575887,nssv2575907,nssv2575921,nssv2575910,nssv2575918,nssv2575911,nssv2575912,nssv2575436,nssv2575901,nssv2575888,nssv2575892,nssv2575914,nssv2575899 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945650 1 142000981 142009034 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575928,nssv2575952,nssv2575931,nssv2575964,nssv2575924,nssv2575938,nssv2575929,nssv2575926,nssv2575961,nssv2575934,nssv2575956,nssv2575925,nssv2575947,nssv2575953,nssv2575955,nssv2575963,nssv2575943,nssv2575950,nssv2575945,nssv2575933,nssv2575930,nssv2575966,nssv2575941,nssv2575965,nssv2575968,nssv2575942,nssv2575939,nssv2575927,nssv2575932,nssv2575922,nssv2575944,nssv2575949,nssv2575946,nssv2575967,nssv2575957,nssv2575954,nssv2575960,nssv2575959,nssv2575936,nssv2575969,nssv2575923,nssv2575962,nssv2575970,nssv2575948,nssv2575940,nssv2575951,nssv2575935,nssv2575937,nssv2575958 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv27083 1 142004106 142090112 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14733,esv20270 M 40 3 1 "" NA12006,NA18523,NA19099,NA19108 nsv945651 1 142009034 142037288 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575980,nssv2575999,nssv2575977,nssv2576014,nssv2575973,nssv2575994,nssv2575978,nssv2575996,nssv2575975,nssv2575971,nssv2575989,nssv2575990,nssv2575976,nssv2575998,nssv2576017,nssv2576008,nssv2576006,nssv2576013,nssv2576007,nssv2575981,nssv2575979,nssv2576002,nssv2576009,nssv2576015,nssv2575988,nssv2575974,nssv2575983,nssv2575982,nssv2575997,nssv2576005,nssv2576016,nssv2576000,nssv2575987,nssv2576011,nssv2576003,nssv2575986,nssv2575993,nssv2575972,nssv2576012,nssv2575991,nssv2576004,nssv2576010,nssv2575985,nssv2576001,nssv2575992,nssv2576018,nssv2576019,nssv2575995 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv179e59 1 142012352 142019250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3383305,esv3450749 M 185 2 0 "" NA12891,NA12892 nsv945652 1 142037288 142038628 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576029,nssv2576020,nssv2576027,nssv2576023,nssv2576026,nssv2576030,nssv2576022,nssv2576021,nssv2576028,nssv2576024,nssv2576025 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945653 1 142037288 142049582 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576038,nssv2576043,nssv2576037,nssv2576032,nssv2576033,nssv2576063,nssv2576040,nssv2576067,nssv2576034,nssv2576076,nssv2576042,nssv2576039,nssv2576035,nssv2576069,nssv2576059,nssv2576070,nssv2576060,nssv2576073,nssv2576056,nssv2576044,nssv2576072,nssv2576053,nssv2576066,nssv2576047,nssv2576075,nssv2576051,nssv2576055,nssv2576065,nssv2576041,nssv2576061,nssv2576048,nssv2576045,nssv2576050,nssv2576049,nssv2576057,nssv2576052,nssv2576064,nssv2576031,nssv2576062,nssv2576078,nssv2576074,nssv2576058,nssv2576054,nssv2576036,nssv2576077,nssv2576071,nssv2576046,nssv2576068 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945654 1 142042302 142049582 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576156,nssv2576127,nssv2576096,nssv2576120,nssv2576150,nssv2576134,nssv2576092,nssv2576140,nssv2576158,nssv2576136,nssv2576159,nssv2576148,nssv2576154,nssv2576128,nssv2576104,nssv2576138,nssv2576100,nssv2576132,nssv2576097,nssv2576143,nssv2576083,nssv2576147,nssv2576101,nssv2576121,nssv2576111,nssv2576119,nssv2576090,nssv2576117,nssv2576082,nssv2576131,nssv2576080,nssv2576124,nssv2576089,nssv2576115,nssv2576087,nssv2576116,nssv2576084,nssv2576135,nssv2576152,nssv2576103,nssv2576093,nssv2576112,nssv2576153,nssv2576114,nssv2576095,nssv2576105,nssv2576081,nssv2576107,nssv2576091,nssv2576141,nssv2576102,nssv2576149,nssv2576099,nssv2576125,nssv2576151,nssv2576113,nssv2576157,nssv2576144,nssv2576155,nssv2576106,nssv2576109,nssv2576130,nssv2576098,nssv2576137,nssv2576094,nssv2576133,nssv2576086,nssv2576110,nssv2576108,nssv2576129,nssv2576088,nssv2576122,nssv2576146,nssv2576139,nssv2576145,nssv2576126,nssv2576079,nssv2576118,nssv2576123,nssv2576142 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945655 1 142049582 142053693 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576166,nssv2576190,nssv2576169,nssv2576512,nssv2576167,nssv2576184,nssv2576162,nssv2576501,nssv2576189,nssv2576178,nssv2576513,nssv2576183,nssv2576163,nssv2576500,nssv2576176,nssv2576177,nssv2576515,nssv2576160,nssv2576175,nssv2576502,nssv2576171,nssv2576503,nssv2576506,nssv2576514,nssv2576188,nssv2576505,nssv2576165,nssv2576179,nssv2576187,nssv2576507,nssv2576182,nssv2576185,nssv2576174,nssv2576164,nssv2576510,nssv2576516,nssv2576180,nssv2576170,nssv2576168,nssv2576173,nssv2576191,nssv2576508,nssv2576181,nssv2576504,nssv2576509,nssv2576161,nssv2576511,nssv2576172 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945658 1 142053693 142057080 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576525,nssv2576531,nssv2576520,nssv2576544,nssv2576524,nssv2576518,nssv2576542,nssv2576523,nssv2575643,nssv2576545,nssv2575640,nssv2576532,nssv2575650,nssv2575657,nssv2576530,nssv2575651,nssv2575655,nssv2576529,nssv2575653,nssv2576536,nssv2576535,nssv2575654,nssv2575642,nssv2575641,nssv2576539,nssv2576534,nssv2575639,nssv2575648,nssv2576526,nssv2576519,nssv2576546,nssv2576522,nssv2575649,nssv2575652,nssv2575644,nssv2576543,nssv2575647,nssv2576540,nssv2576528,nssv2575656,nssv2576527,nssv2575645,nssv2576537,nssv2576521,nssv2576533,nssv2575646,nssv2576541,nssv2576538 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv180e59 1 142055752 142082550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3380867,esv3331832,esv3336504,esv3362800 M 185 4 0 "" NA12891,NA19238,NA19239,NA19240 nsv945660 1 142057080 142057580 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575661,nssv2575678,nssv2575665,nssv2575682,nssv2575666,nssv2575706,nssv2575668,nssv2575687,nssv2575690,nssv2575694,nssv2575679,nssv2575671,nssv2575688,nssv2575676,nssv2575680,nssv2575669,nssv2575683,nssv2575684,nssv2575700,nssv2575695,nssv2575699,nssv2575703,nssv2575698,nssv2575660,nssv2575697,nssv2575705,nssv2575681,nssv2575701,nssv2575667,nssv2575672,nssv2575691,nssv2575674,nssv2575675,nssv2575677,nssv2575659,nssv2575673,nssv2575686,nssv2575693,nssv2575689,nssv2575662,nssv2575663,nssv2575702,nssv2575704,nssv2575685,nssv2575696,nssv2575664,nssv2575692,nssv2575670 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945662 1 142057580 142061527 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575717,nssv2575728,nssv2575710,nssv2576196,nssv2575715,nssv2576197,nssv2575714,nssv2575721,nssv2575722,nssv2575713,nssv2575720,nssv2575734,nssv2575708,nssv2575748,nssv2575723,nssv2575709,nssv2575743,nssv2575729,nssv2575719,nssv2575732,nssv2575741,nssv2575718,nssv2575733,nssv2575739,nssv2575711,nssv2575712,nssv2575746,nssv2575725,nssv2575727,nssv2575716,nssv2575745,nssv2575742,nssv2575740,nssv2576193,nssv2575735,nssv2575747,nssv2576194,nssv2575744,nssv2576192,nssv2575731,nssv2575726,nssv2576198,nssv2575737,nssv2575724,nssv2575736,nssv2576195,nssv2575730,nssv2575738 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945663 1 142061527 142062954 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576288,nssv2576301,nssv2576221,nssv2576322,nssv2576201,nssv2576250,nssv2576202,nssv2576224,nssv2576274,nssv2576240,nssv2576278,nssv2576233,nssv2576269,nssv2576302,nssv2576209,nssv2576326,nssv2576286,nssv2576280,nssv2576220,nssv2576252,nssv2576227,nssv2576222,nssv2576228,nssv2576291,nssv2576270,nssv2576245,nssv2576216,nssv2576265,nssv2576212,nssv2576319,nssv2576210,nssv2576320,nssv2576208,nssv2576261,nssv2576203,nssv2576306,nssv2576200,nssv2576309,nssv2576204,nssv2576287,nssv2576271,nssv2576264,nssv2576207,nssv2576304,nssv2576275,nssv2576263,nssv2576217,nssv2576315,nssv2576206,nssv2576259,nssv2576213,nssv2576256,nssv2576272,nssv2576237,nssv2576214,nssv2576246,nssv2576273,nssv2576311,nssv2576218,nssv2576283,nssv2576277,nssv2576284,nssv2576285,nssv2576317,nssv2576205,nssv2576313,nssv2576215,nssv2576238,nssv2576219,nssv2576312,nssv2576223,nssv2576323,nssv2576211,nssv2576242,nssv2576281,nssv2576241,nssv2576276,nssv2576290,nssv2576230,nssv2576296,nssv2576267,nssv2576239,nssv2576279,nssv2576234,nssv2576295,nssv2576289,nssv2576232,nssv2576321,nssv2576293,nssv2576231,nssv2576251,nssv2576292,nssv2576325,nssv2576266,nssv2576307,nssv2576300,nssv2576249,nssv2576236,nssv2576298,nssv2576262,nssv2576253,nssv2576258,nssv2576303,nssv2576299,nssv2576257,nssv2576243,nssv2576254,nssv2576297,nssv2576255,nssv2576305,nssv2576260,nssv2576235,nssv2576316,nssv2576244,nssv2576310,nssv2576248,nssv2576247,nssv2576199,nssv2576314,nssv2576294,nssv2576229,nssv2576226,nssv2576268,nssv2576324,nssv2576225,nssv2576318,nssv2576282,nssv2576308 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945664 1 142062954 142064883 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576331,nssv2576368,nssv2576415,nssv2576429,nssv2576341,nssv2576421,nssv2576398,nssv2576372,nssv2576329,nssv2576446,nssv2576346,nssv2576362,nssv2576338,nssv2576431,nssv2576400,nssv2576358,nssv2576340,nssv2576376,nssv2576356,nssv2576443,nssv2576348,nssv2576439,nssv2576406,nssv2576434,nssv2576357,nssv2576424,nssv2576404,nssv2576453,nssv2576345,nssv2576438,nssv2576334,nssv2576450,nssv2576359,nssv2576377,nssv2576410,nssv2576411,nssv2576344,nssv2576454,nssv2576339,nssv2576387,nssv2576337,nssv2576384,nssv2576414,nssv2576373,nssv2576349,nssv2576369,nssv2576342,nssv2576408,nssv2576343,nssv2576371,nssv2576405,nssv2576370,nssv2576407,nssv2576328,nssv2576350,nssv2576442,nssv2576335,nssv2576361,nssv2576399,nssv2576392,nssv2576333,nssv2576452,nssv2576332,nssv2576455,nssv2576347,nssv2576360,nssv2576402,nssv2576440,nssv2576401,nssv2576432,nssv2576352,nssv2576385,nssv2576403,nssv2576378,nssv2576336,nssv2576363,nssv2576330,nssv2576390,nssv2576425,nssv2576436,nssv2576430,nssv2576409,nssv2576416,nssv2576445,nssv2576374,nssv2576354,nssv2576433,nssv2576394,nssv2576351,nssv2576447,nssv2576375,nssv2576365,nssv2576413,nssv2576419,nssv2576388,nssv2576435,nssv2576397,nssv2576395,nssv2576381,nssv2576382,nssv2576386,nssv2576355,nssv2576448,nssv2576441,nssv2576444,nssv2576364,nssv2576366,nssv2576353,nssv2576417,nssv2576423,nssv2576412,nssv2576426,nssv2576418,nssv2576327,nssv2576427,nssv2576380,nssv2576396,nssv2576391,nssv2576383,nssv2576422,nssv2576451,nssv2576437,nssv2576367,nssv2576393,nssv2576428,nssv2576420,nssv2576449,nssv2576389,nssv2576379 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945665 1 142064883 142066114 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576468,nssv2576601,nssv2576480,nssv2576498,nssv2576464,nssv2576488,nssv2576467,nssv2576482,nssv2576472,nssv2576586,nssv2576458,nssv2576456,nssv2576485,nssv2576603,nssv2576478,nssv2576594,nssv2576614,nssv2576590,nssv2576620,nssv2576587,nssv2576466,nssv2576602,nssv2576462,nssv2576597,nssv2576616,nssv2576610,nssv2576617,nssv2576604,nssv2576473,nssv2576492,nssv2576619,nssv2576496,nssv2576477,nssv2576495,nssv2576459,nssv2576591,nssv2576618,nssv2576497,nssv2576612,nssv2576608,nssv2576465,nssv2576493,nssv2576613,nssv2576483,nssv2576461,nssv2576499,nssv2576471,nssv2576490,nssv2576615,nssv2576479,nssv2576476,nssv2576607,nssv2576463,nssv2576491,nssv2576470,nssv2576489,nssv2576621,nssv2576599,nssv2576484,nssv2576606,nssv2576474,nssv2576494,nssv2576475,nssv2576598,nssv2576469,nssv2576481,nssv2576457,nssv2576609,nssv2576460,nssv2576593,nssv2576487,nssv2576592,nssv2576588,nssv2576605,nssv2576600,nssv2576622,nssv2576589,nssv2576486,nssv2576596,nssv2576595,nssv2576611 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946624 1 142064883 142071054 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576625,nssv2576639,nssv2576630,nssv2576648,nssv2576632,nssv2576644,nssv2576629,nssv2576652,nssv2576626,nssv2576656,nssv2576628,nssv2576638,nssv2576650,nssv2576654,nssv2576655,nssv2576670,nssv2576662,nssv2576659,nssv2576668,nssv2576635,nssv2576660,nssv2576665,nssv2576657,nssv2576653,nssv2576640,nssv2576633,nssv2576663,nssv2576645,nssv2576658,nssv2576637,nssv2576664,nssv2576669,nssv2576661,nssv2576643,nssv2576641,nssv2576623,nssv2576666,nssv2576631,nssv2576636,nssv2576634,nssv2576627,nssv2576642,nssv2576649,nssv2576667,nssv2576651,nssv2576624,nssv2576647,nssv2576646 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946626 1 142071054 142076219 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576679,nssv2576704,nssv2576678,nssv2576686,nssv2576674,nssv2576711,nssv2576675,nssv2576697,nssv2576681,nssv2576709,nssv2576680,nssv2576698,nssv2576690,nssv2576710,nssv2576684,nssv2576687,nssv2576714,nssv2576695,nssv2576712,nssv2574876,nssv2576706,nssv2576694,nssv2576707,nssv2574879,nssv2576696,nssv2576703,nssv2576708,nssv2576672,nssv2576701,nssv2576677,nssv2574878,nssv2576689,nssv2576691,nssv2576705,nssv2576702,nssv2576685,nssv2576673,nssv2576699,nssv2576713,nssv2574877,nssv2576688,nssv2576676,nssv2576715,nssv2576700,nssv2576683,nssv2576682,nssv2576693,nssv2576692 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946628 1 142076219 142082089 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574889,nssv2574901,nssv2574891,nssv2574926,nssv2574883,nssv2574887,nssv2574884,nssv2574898,nssv2574888,nssv2574882,nssv2574925,nssv2574893,nssv2574896,nssv2574892,nssv2574910,nssv2574900,nssv2574914,nssv2574922,nssv2574918,nssv2574881,nssv2574911,nssv2574923,nssv2574915,nssv2574929,nssv2574906,nssv2574905,nssv2574894,nssv2574904,nssv2574890,nssv2574902,nssv2574903,nssv2574927,nssv2574933,nssv2574916,nssv2574920,nssv2574932,nssv2574885,nssv2574924,nssv2574921,nssv2574928,nssv2574907,nssv2574931,nssv2574913,nssv2574895,nssv2574909,nssv2574917,nssv2574899,nssv2574912 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946213 1 142082089 142094138 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788977,nssv1789065,nssv1789051,nssv1789007,nssv1788988,nssv1789012,nssv1788980,nssv1789061,nssv1789001,nssv1789005,nssv1788994,nssv1789014,nssv1788976,nssv1789066,nssv1788990,nssv1789017,nssv1788997,nssv1789059,nssv1789054,nssv1789067,nssv1788982,nssv1789024,nssv1788973,nssv1789060,nssv1789055,nssv1789031,nssv1788986,nssv1789021,nssv1788981,nssv1789068,nssv1789057,nssv1789033,nssv1788991,nssv1789015,nssv1789050,nssv1789004,nssv1788987,nssv1789063,nssv1789049,nssv1789047,nssv1788979,nssv1789042,nssv1788985,nssv1789011,nssv1788975,nssv1789039,nssv1788993,nssv1789062,nssv1789058,nssv1789064,nssv1789053,nssv1789027,nssv1788996,nssv1788972,nssv1789056,nssv1789010,nssv1789003,nssv1789026,nssv1788983,nssv1789020,nssv1789000,nssv1789028,nssv1788992,nssv1789034,nssv1788989,nssv1788999,nssv1789052,nssv1789046,nssv1788978,nssv1789044,nssv1788984,nssv1789013,nssv1788974,nssv1789037,nssv1789002,nssv1789043,nssv1789006,nssv1788995,nssv1789008,nssv1789009,nssv1789038,nssv1789029,nssv1789036,nssv1789041,nssv1789030,nssv1789019,nssv1789025,nssv1789018,nssv1789048,nssv1789023,nssv1789032,nssv1789016,nssv1789022,nssv1789045,nssv1789035,nssv1788998,nssv1789040 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3430394 1 142084552 142085350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691825 M 185 1 0 "" NA12891 nsv946630 1 142085211 142087049 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574945,nssv2574947,nssv2574942,nssv2574980,nssv2574943,nssv2574969,nssv2574938,nssv2574970,nssv2574937,nssv2574971,nssv2574966,nssv2574978,nssv2574960,nssv2574935,nssv2574939,nssv2574956,nssv2574977,nssv2574951,nssv2574944,nssv2574982,nssv2574962,nssv2574954,nssv2574948,nssv2574958,nssv2574979,nssv2574967,nssv2574973,nssv2574961,nssv2574976,nssv2574957,nssv2574955,nssv2574950,nssv2574953,nssv2574981,nssv2574949,nssv2574965,nssv2574983,nssv2574984,nssv2574986,nssv2574964,nssv2574959,nssv2574975,nssv2574946,nssv2574940,nssv2574936,nssv2574968,nssv2574987,nssv2574972 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv29756 1 142090436 142111199 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21331 M 40 0 1 "" NA18916 nsv946215 1 142094138 142120277 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787089,nssv2575036,nssv1787024,nssv1787081,nssv1787031,nssv2575004,nssv1787083,nssv2575006,nssv1787084,nssv1787072,nssv1789073,nssv2574988,nssv1789077,nssv1787048,nssv1787085,nssv2574999,nssv1787088,nssv1787078,nssv2574998,nssv1787056,nssv1787042,nssv1787061,nssv1787038,nssv1787068,nssv1789076,nssv2574993,nssv1787041,nssv1787080,nssv1789075,nssv1787063,nssv1787026,nssv1787059,nssv1787032,nssv1787066,nssv1787091,nssv2575024,nssv1787025,nssv1787055,nssv1787090,nssv2575011,nssv1787034,nssv2575010,nssv1789070,nssv1789069,nssv1787030,nssv2574997,nssv2574995,nssv2575035,nssv1787029,nssv2575017,nssv1787086,nssv1787082,nssv1787037,nssv1787073,nssv1787035,nssv1787053,nssv1787033,nssv1787069,nssv1787044,nssv1787076,nssv1789078,nssv1787047,nssv1787092,nssv2575001,nssv1789071,nssv2575000,nssv2574994,nssv2575002,nssv1787027,nssv1787050,nssv1787028,nssv2575005,nssv1789079,nssv1787062,nssv1787087,nssv2575033,nssv2574990,nssv2575015,nssv1789072,nssv1787046,nssv1789074,nssv1787051,nssv1787052,nssv2575023,nssv2575014,nssv1787077,nssv1787058,nssv2575031,nssv2575020,nssv1787040,nssv1787049,nssv1787065,nssv2574991,nssv1787045,nssv2575039,nssv1787036,nssv2575037,nssv2575027,nssv2575021,nssv1787070,nssv2574989,nssv2575003,nssv2575022,nssv1787054,nssv1787067,nssv1787079,nssv2575008,nssv2575019,nssv2575026,nssv1787060,nssv2575025,nssv1787043,nssv1787075,nssv2575034,nssv2574992,nssv2575016,nssv2575032,nssv1787057,nssv1787064,nssv1787074,nssv2575028,nssv2575012,nssv2575038,nssv1787071,nssv2575009,nssv1787039,nssv2575013,nssv2575030 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv436165 1 142097726 142099955 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466706 M 2 0 1 "" NA18505 esv25472 1 142119712 142134236 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16448,esv20096,esv11361 M 40 2 2 "" NA11931,NA12006,NA12828,NA12878 esv3436967 1 142119923 142122873 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808905 M 185 0 0 "" NA12878 nsv946216 1 142120277 142128109 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787171,nssv1787161,nssv1787111,nssv1787151,nssv1787121,nssv1787136,nssv1787095,nssv1787189,nssv1787097,nssv1787180,nssv1787175,nssv1787182,nssv1787102,nssv1787187,nssv1787172,nssv1787152,nssv1787170,nssv1787158,nssv1787103,nssv1787148,nssv1787173,nssv1787160,nssv1787118,nssv1787143,nssv1787122,nssv1787154,nssv1787099,nssv1787149,nssv1787106,nssv1787188,nssv1787115,nssv1787128,nssv1787100,nssv1787139,nssv1787104,nssv1787162,nssv1787114,nssv1787140,nssv1787177,nssv1787168,nssv1787107,nssv1787146,nssv1787178,nssv1787153,nssv1787112,nssv1787183,nssv1787096,nssv1787164,nssv1787110,nssv1787141,nssv1787109,nssv1787185,nssv1787117,nssv1787127,nssv1787113,nssv1787156,nssv1787176,nssv1787142,nssv1787108,nssv1787163,nssv1787094,nssv1787129,nssv1787124,nssv1787126,nssv1787179,nssv1787181,nssv1787098,nssv1787133,nssv1787105,nssv1787093,nssv1787174,nssv1787130,nssv1787101,nssv1787120,nssv1787125,nssv1787184,nssv1787137,nssv1787131,nssv1787157,nssv1787119,nssv1787123,nssv1787132,nssv1787159,nssv1787116,nssv1787166,nssv1787145,nssv1787147,nssv1787150,nssv1787169,nssv1787155,nssv1787165,nssv1787135,nssv1787138,nssv1787167,nssv1787134,nssv1787144,nssv1787186 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv12n16 1 142121960 142123319 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv435971,nsv435947,nsv436649 M 2 0 0 "" NA15510,NA18505 nsv435948 1 142122088 142293439 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466750 M 2 0 0 "" NA15510 esv3388849 1 142122446 142125564 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808906 M 185 0 0 "" NA12878 nsv436231 1 142134283 142274281 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466761 M 2 0 1 "" NA18505 nsv946631 1 142184139 142185738 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575047,nssv2575068,nssv2575044,nssv2582949,nssv2575050,nssv2575055,nssv2575048,nssv2575064,nssv2575043,nssv2582948,nssv2582947,nssv2575046,nssv2575058,nssv2582960,nssv2575065,nssv2575069,nssv2582957,nssv2582954,nssv2575053,nssv2575060,nssv2575057,nssv2575052,nssv2575066,nssv2582946,nssv2582964,nssv2575054,nssv2575063,nssv2582951,nssv2582963,nssv2575059,nssv2582959,nssv2582962,nssv2575045,nssv2582952,nssv2575042,nssv2575041,nssv2582953,nssv2582955,nssv2582950,nssv2575056,nssv2582958,nssv2582944,nssv2582945,nssv2582961,nssv2575061,nssv2575067,nssv2575049,nssv2582956 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv181e59 1 142184352 142225150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3451964,esv3353677,esv3375111,esv3336865 M 185 4 0 "" NA12878,NA12891,NA19239,NA19240 esv3368898 1 142184352 142383750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691830 M 185 1 0 "" NA19238 esv25618 1 142184369 142361422 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19670,esv15054,esv10023,esv13643 M 40 3 2 "" NA11993,NA12006,NA12828,NA18523,NA19108 nsv547649 1 142185031 142255772 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723053 M 17421 1 0 "" nsv946217 1 142185738 142272166 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787208,nssv1787233,nssv1787201,nssv1787279,nssv1787273,nssv1787229,nssv1787203,nssv1787241,nssv1787268,nssv1787286,nssv1787194,nssv1787216,nssv1787196,nssv1787258,nssv1787200,nssv1787255,nssv1787275,nssv1787245,nssv1787267,nssv1787249,nssv1787272,nssv1787252,nssv1787215,nssv1787264,nssv1787270,nssv1787277,nssv1787274,nssv1787284,nssv1787211,nssv1787257,nssv1787219,nssv1787285,nssv1787206,nssv1787234,nssv1787197,nssv1787243,nssv1787207,nssv1787259,nssv1787214,nssv1787240,nssv1787209,nssv1787265,nssv1787205,nssv1787261,nssv1787218,nssv1787232,nssv1787210,nssv1787236,nssv1787198,nssv1787250,nssv1787269,nssv1787246,nssv1787212,nssv1787280,nssv1787191,nssv1787282,nssv1787193,nssv1787190,nssv1787192,nssv1787225,nssv1787204,nssv1787230,nssv1787221,nssv1787222,nssv1787276,nssv1787253,nssv1787195,nssv1787227,nssv1787199,nssv1787238,nssv1787202,nssv1787260,nssv1787271,nssv1787239,nssv1787217,nssv1787224,nssv1787278,nssv1787281,nssv1787226,nssv1787223,nssv1787247,nssv1787254,nssv1787263,nssv1787228,nssv1787256,nssv1787237,nssv1787283,nssv1787220,nssv1787262,nssv1787231,nssv1787266,nssv1787242,nssv1787248,nssv1787213,nssv1787235,nssv1787244,nssv1787251 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946633 1 142189449 142201580 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582968,nssv2582999,nssv2582972,nssv2582997,nssv2582969,nssv2583010,nssv2582975,nssv2582983,nssv2582973,nssv2582994,nssv2583001,nssv2582988,nssv2583007,nssv2583006,nssv2583012,nssv2582996,nssv2583011,nssv2582989,nssv2582980,nssv2582986,nssv2583002,nssv2582993,nssv2583004,nssv2582985,nssv2582991,nssv2582979,nssv2583008,nssv2582971,nssv2582998,nssv2582984,nssv2583003,nssv2582970,nssv2582987,nssv2582976,nssv2582995,nssv2582978,nssv2583009,nssv2582967,nssv2582990,nssv2582974,nssv2583005,nssv2582982,nssv2582981,nssv2583013,nssv2582966,nssv2583000,nssv2582992,nssv2582977 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv4n82 1 142201580 142204680 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946634,nsv946635 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946636 1 142204680 142206825 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583147,nssv2583117,nssv2583077,nssv2583118,nssv2583087,nssv2583140,nssv2583078,nssv2583130,nssv2583146,nssv2583119,nssv2583086,nssv2583139,nssv2583150,nssv2583107,nssv2583149,nssv2583125,nssv2583091,nssv2583106,nssv2583093,nssv2583142,nssv2583097,nssv2583116,nssv2583101,nssv2583109,nssv2583145,nssv2583110,nssv2583152,nssv2583127,nssv2583076,nssv2583115,nssv2583079,nssv2583096,nssv2583092,nssv2583122,nssv2583082,nssv2583135,nssv2583089,nssv2583132,nssv2583081,nssv2583073,nssv2583098,nssv2583105,nssv2583085,nssv2583112,nssv2583088,nssv2583126,nssv2583148,nssv2583128,nssv2583090,nssv2583114,nssv2583083,nssv2583123,nssv2583094,nssv2583141,nssv2583104,nssv2583129,nssv2583075,nssv2583113,nssv2583095,nssv2583108,nssv2583151,nssv2583121,nssv2583080,nssv2583136,nssv2583144,nssv2583153,nssv2583074,nssv2583120,nssv2583143,nssv2583100,nssv2583102,nssv2583138,nssv2583084,nssv2583124,nssv2583131,nssv2583099,nssv2583133,nssv2583111,nssv2583137,nssv2583103,nssv2583134 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946637 1 142204680 142209371 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583156,nssv2584123,nssv2583161,nssv2583174,nssv2583157,nssv2583167,nssv2583160,nssv2583169,nssv2583163,nssv2584109,nssv2583183,nssv2583180,nssv2583172,nssv2584120,nssv2583158,nssv2583168,nssv2584115,nssv2583164,nssv2583162,nssv2584111,nssv2584112,nssv2583166,nssv2583176,nssv2583170,nssv2583179,nssv2583154,nssv2584121,nssv2583165,nssv2583171,nssv2583178,nssv2584113,nssv2584117,nssv2584119,nssv2584125,nssv2584124,nssv2583155,nssv2584122,nssv2584116,nssv2583177,nssv2584118,nssv2583181,nssv2583182,nssv2584108,nssv2583175,nssv2584114,nssv2584110,nssv2583159,nssv2583173 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv471699 1 142206284 142356882 CNV loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv549634,nssv549635 M 48 0 2 "" NA10971,NA17014 nsv946638 1 142209371 142209871 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584148,nssv2584169,nssv2584142,nssv2584180,nssv2584144,nssv2584185,nssv2584151,nssv2584149,nssv2584205,nssv2584178,nssv2584196,nssv2584192,nssv2584137,nssv2584126,nssv2584204,nssv2584179,nssv2584157,nssv2584161,nssv2584203,nssv2584162,nssv2584150,nssv2584152,nssv2584201,nssv2584186,nssv2584143,nssv2584171,nssv2584132,nssv2584158,nssv2584133,nssv2584187,nssv2584141,nssv2584194,nssv2584200,nssv2584193,nssv2584127,nssv2584163,nssv2584154,nssv2584177,nssv2584147,nssv2584167,nssv2584202,nssv2584159,nssv2584131,nssv2584160,nssv2584130,nssv2584153,nssv2584155,nssv2584172,nssv2584128,nssv2584183,nssv2584197,nssv2584164,nssv2584199,nssv2584168,nssv2584140,nssv2584173,nssv2584145,nssv2584184,nssv2584135,nssv2584156,nssv2584129,nssv2584176,nssv2584134,nssv2584188,nssv2584146,nssv2584170,nssv2584136,nssv2584165,nssv2584138,nssv2584195,nssv2584139,nssv2584191,nssv2584198,nssv2584174,nssv2584182,nssv2584175,nssv2584181,nssv2584190,nssv2584189,nssv2584166 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946639 1 142209371 142212178 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584208,nssv2584218,nssv2584212,nssv2584247,nssv2584215,nssv2584228,nssv2584213,nssv2584240,nssv2584209,nssv2584224,nssv2584242,nssv2584232,nssv2584210,nssv2584238,nssv2584216,nssv2584251,nssv2584219,nssv2584207,nssv2584250,nssv2584252,nssv2584245,nssv2584237,nssv2584223,nssv2584233,nssv2584217,nssv2584220,nssv2584243,nssv2584239,nssv2584236,nssv2584227,nssv2584246,nssv2584241,nssv2584226,nssv2584229,nssv2584235,nssv2584225,nssv2584248,nssv2584234,nssv2584249,nssv2584231,nssv2584244,nssv2584253,nssv2584221,nssv2584206,nssv2584214,nssv2584230,nssv2584222,nssv2584211 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946640 1 142212178 142213168 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584306,nssv2584347,nssv2584317,nssv2584356,nssv2584304,nssv2584283,nssv2584314,nssv2584349,nssv2584321,nssv2584292,nssv2584381,nssv2584370,nssv2584316,nssv2584269,nssv2584324,nssv2584300,nssv2584380,nssv2584372,nssv2584261,nssv2584303,nssv2584264,nssv2584333,nssv2584334,nssv2584336,nssv2584310,nssv2584352,nssv2584332,nssv2584267,nssv2584320,nssv2584255,nssv2584374,nssv2584256,nssv2584323,nssv2584346,nssv2584379,nssv2584260,nssv2584328,nssv2584288,nssv2584378,nssv2584281,nssv2584258,nssv2584344,nssv2584325,nssv2584259,nssv2584305,nssv2584351,nssv2584308,nssv2584367,nssv2584382,nssv2584294,nssv2584307,nssv2584295,nssv2584373,nssv2584265,nssv2584311,nssv2584363,nssv2584318,nssv2584293,nssv2584375,nssv2584343,nssv2584309,nssv2584273,nssv2584315,nssv2584297,nssv2584322,nssv2584348,nssv2584331,nssv2584362,nssv2584377,nssv2584345,nssv2584319,nssv2584296,nssv2584257,nssv2584368,nssv2584262,nssv2584284,nssv2584376,nssv2584263,nssv2584327,nssv2584282,nssv2584312,nssv2584289,nssv2584313,nssv2584364,nssv2584276,nssv2584298,nssv2584290,nssv2584266,nssv2584299,nssv2584287,nssv2584353,nssv2584338,nssv2584341,nssv2584360,nssv2584340,nssv2584278,nssv2584329,nssv2584371,nssv2584291,nssv2584272,nssv2584285,nssv2584275,nssv2584271,nssv2584342,nssv2584357,nssv2584301,nssv2584270,nssv2584359,nssv2584365,nssv2584355,nssv2584286,nssv2584369,nssv2584277,nssv2584268,nssv2584361,nssv2584358,nssv2584279,nssv2584354,nssv2584366,nssv2584326,nssv2584274,nssv2584280,nssv2584350,nssv2584339,nssv2584254,nssv2584330,nssv2584337,nssv2584302,nssv2584335 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946641 1 142213168 142214034 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584391,nssv2582630,nssv2584387,nssv2584401,nssv2584386,nssv2584389,nssv2584390,nssv2584397,nssv2584393,nssv2584406,nssv2584384,nssv2582628,nssv2584399,nssv2584388,nssv2584405,nssv2582641,nssv2584413,nssv2584411,nssv2584398,nssv2582636,nssv2584408,nssv2582640,nssv2584409,nssv2584392,nssv2584412,nssv2582637,nssv2584400,nssv2582634,nssv2585039,nssv2584415,nssv2584395,nssv2582635,nssv2584402,nssv2584404,nssv2582631,nssv2582638,nssv2582629,nssv2582633,nssv2584385,nssv2584407,nssv2584383,nssv2582627,nssv2584396,nssv2584403,nssv2584410,nssv2584414,nssv2584394,nssv2582632,nssv2582639 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946643 1 142214034 142224041 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582652,nssv2582687,nssv2582645,nssv2582648,nssv2582650,nssv2582644,nssv2582646,nssv2582661,nssv2582649,nssv2582656,nssv2582654,nssv2582690,nssv2582680,nssv2582653,nssv2582682,nssv2582688,nssv2582669,nssv2582674,nssv2582665,nssv2582668,nssv2582666,nssv2582673,nssv2582677,nssv2582676,nssv2582659,nssv2582662,nssv2582678,nssv2582671,nssv2582667,nssv2582663,nssv2582660,nssv2582672,nssv2582643,nssv2582664,nssv2582675,nssv2582670,nssv2582686,nssv2582647,nssv2582689,nssv2582683,nssv2582655,nssv2582685,nssv2582681,nssv2582657,nssv2582651,nssv2582679,nssv2582658,nssv2582684 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3401186 1 142218852 142222250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691832 M 185 1 0 "" NA19239 esv3408833 1 142218952 142225050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691833 M 185 1 0 "" NA19240 nsv946644 1 142224041 142229159 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582703,nssv2582758,nssv2582762,nssv2582718,nssv2582705,nssv2582727,nssv2582702,nssv2582760,nssv2582720,nssv2582756,nssv2582694,nssv2582744,nssv2582696,nssv2582759,nssv2582707,nssv2582691,nssv2582701,nssv2582725,nssv2582715,nssv2582757,nssv2582763,nssv2582753,nssv2582697,nssv2582729,nssv2582695,nssv2582723,nssv2582766,nssv2582732,nssv2582713,nssv2582745,nssv2582706,nssv2582734,nssv2582709,nssv2582752,nssv2582704,nssv2582736,nssv2582764,nssv2582755,nssv2582708,nssv2582721,nssv2582716,nssv2582749,nssv2582770,nssv2582751,nssv2582767,nssv2582741,nssv2582722,nssv2582726,nssv2582761,nssv2582742,nssv2582768,nssv2582743,nssv2582710,nssv2582754,nssv2582712,nssv2582728,nssv2582693,nssv2582733,nssv2582700,nssv2582737,nssv2582765,nssv2582714,nssv2582699,nssv2582750,nssv2582692,nssv2582746,nssv2582711,nssv2582747,nssv2582698,nssv2582738,nssv2582719,nssv2582724,nssv2582769,nssv2582717,nssv2582735,nssv2582730,nssv2582740,nssv2582731,nssv2582748,nssv2582739 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946645 1 142224041 142232962 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582774,nssv2582790,nssv2582778,nssv2582817,nssv2582780,nssv2582794,nssv2582773,nssv2582789,nssv2582777,nssv2582806,nssv2582804,nssv2582813,nssv2582785,nssv2582787,nssv2582775,nssv2582786,nssv2582800,nssv2582784,nssv2582810,nssv2582803,nssv2582798,nssv2582807,nssv2582792,nssv2582771,nssv2582795,nssv2582811,nssv2582791,nssv2582788,nssv2582802,nssv2582793,nssv2582809,nssv2582816,nssv2582783,nssv2582797,nssv2582818,nssv2582781,nssv2582772,nssv2582799,nssv2582776,nssv2582796,nssv2582814,nssv2582805,nssv2582779,nssv2582801,nssv2582808,nssv2582812,nssv2582815,nssv2582782 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3372689 1 142225752 142241650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691834 M 185 1 0 "" NA12891 esv3354130 1 142225752 142249450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691835 M 185 1 0 "" NA19240 nsv946646 1 142232962 142233640 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582826,nssv2582824,nssv2582822,nssv2582819,nssv2582828,nssv2582829,nssv2582821,nssv2582827,nssv2582825,nssv2582823,nssv2582820 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946647 1 142233640 142234835 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583808,nssv2582864,nssv2583811,nssv2582857,nssv2582832,nssv2582843,nssv2583809,nssv2582852,nssv2583804,nssv2582851,nssv2582833,nssv2582868,nssv2582839,nssv2582853,nssv2582836,nssv2583801,nssv2582837,nssv2583803,nssv2583805,nssv2582849,nssv2582844,nssv2582862,nssv2582830,nssv2582858,nssv2582856,nssv2582875,nssv2582873,nssv2582850,nssv2583812,nssv2583807,nssv2583802,nssv2582872,nssv2582834,nssv2582838,nssv2582863,nssv2582860,nssv2582842,nssv2582855,nssv2582845,nssv2583806,nssv2582874,nssv2583800,nssv2582848,nssv2582866,nssv2582871,nssv2582847,nssv2582869,nssv2582841,nssv2582865,nssv2582840,nssv2582870,nssv2582831,nssv2582859,nssv2582846,nssv2582861,nssv2583810,nssv2582867,nssv2582854,nssv2582835 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946648 1 142234835 142236055 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583819,nssv2583840,nssv2583822,nssv2583832,nssv2583820,nssv2583830,nssv2583816,nssv2583854,nssv2583815,nssv2583850,nssv2583851,nssv2583825,nssv2583848,nssv2583817,nssv2583814,nssv2583860,nssv2583834,nssv2583837,nssv2583833,nssv2583821,nssv2583843,nssv2583855,nssv2583846,nssv2583841,nssv2583827,nssv2583824,nssv2583828,nssv2583849,nssv2583835,nssv2583845,nssv2583818,nssv2583852,nssv2583847,nssv2583839,nssv2583831,nssv2583844,nssv2583853,nssv2583838,nssv2583826,nssv2583823,nssv2583856,nssv2583857,nssv2583813,nssv2583842,nssv2583829,nssv2583858,nssv2583859,nssv2583836 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946650 1 142236055 142270373 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583868,nssv2583889,nssv2583869,nssv2583898,nssv2583864,nssv2583879,nssv2583871,nssv2583890,nssv2583865,nssv2583903,nssv2583874,nssv2583892,nssv2583902,nssv2583872,nssv2583908,nssv2583906,nssv2583894,nssv2583887,nssv2583886,nssv2583897,nssv2583905,nssv2583901,nssv2583875,nssv2583904,nssv2583870,nssv2583882,nssv2583884,nssv2583877,nssv2583880,nssv2583895,nssv2583873,nssv2583866,nssv2583867,nssv2583900,nssv2583888,nssv2583862,nssv2583899,nssv2583907,nssv2583883,nssv2583909,nssv2583885,nssv2583891,nssv2583896,nssv2583893,nssv2583863,nssv2583881,nssv2583878,nssv2583876 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3350165 1 142257552 142285850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691836 M 185 1 0 "" NA19240 esv3368172 1 142259602 142259603 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740924 M 185 1 0 "" NA12878 nsv946652 1 142270373 142271069 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583918,nssv2583955,nssv2583920,nssv2583949,nssv2583914,nssv2583931,nssv2583917,nssv2583951,nssv2583913,nssv2583953,nssv2583912,nssv2583959,nssv2583945,nssv2583927,nssv2583925,nssv2583950,nssv2583922,nssv2583932,nssv2583956,nssv2583938,nssv2583946,nssv2583939,nssv2583916,nssv2583943,nssv2583915,nssv2583935,nssv2583923,nssv2583936,nssv2583940,nssv2583926,nssv2583944,nssv2583919,nssv2583934,nssv2583941,nssv2583937,nssv2583948,nssv2583942,nssv2583947,nssv2583930,nssv2583933,nssv2583921,nssv2583952,nssv2583911,nssv2583954,nssv2583928,nssv2583929,nssv2583924,nssv2583958,nssv2583957 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946653 1 142271069 142272166 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583967,nssv2583960,nssv2583969,nssv2583998,nssv2583962,nssv2584006,nssv2583963,nssv2583981,nssv2583966,nssv2583999,nssv2583968,nssv2584002,nssv2583980,nssv2583983,nssv2583971,nssv2583970,nssv2583977,nssv2583976,nssv2583984,nssv2583986,nssv2583985,nssv2584005,nssv2583994,nssv2583992,nssv2584001,nssv2583991,nssv2583974,nssv2583995,nssv2584004,nssv2583979,nssv2583982,nssv2583989,nssv2583965,nssv2584003,nssv2584007,nssv2583978,nssv2584008,nssv2583987,nssv2583972,nssv2583964,nssv2583973,nssv2583990,nssv2583993,nssv2583988,nssv2583997,nssv2583975,nssv2584000,nssv2583996,nssv2583961 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946654 1 142272166 142296937 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584015,nssv2584010,nssv2584018,nssv2584033,nssv2584016,nssv2584046,nssv2584011,nssv2584052,nssv2584012,nssv2584032,nssv2584051,nssv2584050,nssv2584036,nssv2584014,nssv2584027,nssv2584056,nssv2584017,nssv2584044,nssv2584043,nssv2584038,nssv2584009,nssv2584040,nssv2584019,nssv2584025,nssv2584055,nssv2584026,nssv2584053,nssv2584037,nssv2584013,nssv2584047,nssv2584034,nssv2584045,nssv2584049,nssv2584039,nssv2584020,nssv2584024,nssv2584022,nssv2584041,nssv2584042,nssv2584030,nssv2584054,nssv2584035,nssv2584029,nssv2584031,nssv2584048,nssv2584021,nssv2584028,nssv2584023 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3442983 1 142272652 142285150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691837 M 185 1 0 "" NA12891 nsv436772 1 142276172 142280706 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466772 M 2 1 0 "" NA18505 dgv182e59 1 142286952 142304750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3452180,esv3436048 M 185 2 0 "" NA12892,NA19239 esv3382553 1 142289252 142300550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691840 M 185 1 0 "" NA19240 esv3334978 1 142289852 142294850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691841 M 185 1 0 "" NA12891 esv3326810 1 142295352 142299850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691843 M 185 1 0 "" NA12891 nsv946655 1 142296937 142306948 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584066,nssv2584073,nssv2584060,nssv2584068,nssv2584063,nssv2584058,nssv2584059,nssv2584089,nssv2584064,nssv2584085,nssv2584098,nssv2584079,nssv2584101,nssv2584075,nssv2584096,nssv2584095,nssv2584097,nssv2584103,nssv2584092,nssv2584083,nssv2584082,nssv2584057,nssv2584094,nssv2584102,nssv2584093,nssv2584078,nssv2584086,nssv2584077,nssv2584069,nssv2584074,nssv2584090,nssv2584062,nssv2584076,nssv2584084,nssv2584091,nssv2584067,nssv2584087,nssv2584065,nssv2584072,nssv2584099,nssv2584104,nssv2584081,nssv2584071,nssv2584100,nssv2584088,nssv2584080,nssv2584070,nssv2584061 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv436767 1 142302037 142305468 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466783 M 2 1 0 "" NA18505 esv3393838 1 142305252 142307950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691844 M 185 1 0 "" NA12891 nsv946656 1 142306948 142368414 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584420,nssv2584546,nssv2584419,nssv2584551,nssv2584422,nssv2584543,nssv2584416,nssv2584563,nssv2584107,nssv2584532,nssv2584562,nssv2584418,nssv2584528,nssv2584106,nssv2584549,nssv2584531,nssv2584545,nssv2584552,nssv2584557,nssv2584537,nssv2584540,nssv2584560,nssv2584553,nssv2584533,nssv2584559,nssv2584550,nssv2584558,nssv2584534,nssv2584555,nssv2584538,nssv2584417,nssv2584529,nssv2584542,nssv2584535,nssv2584548,nssv2584536,nssv2584561,nssv2584105,nssv2584547,nssv2584564,nssv2584554,nssv2584530,nssv2584527,nssv2584539,nssv2584421,nssv2584541,nssv2584544,nssv2584556 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv436778 1 142320323 142325462 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466794 M 2 1 0 "" NA18505 dgv183e59 1 142321552 142341750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3346949,esv3396300 M 185 2 0 "" NA12891,NA19239 dgv184e59 1 142345752 142363350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3445089,esv3443050,esv3357505,esv3384401 M 185 4 0 "" NA12878,NA12891,NA12892,NA19240 esv3416758 1 142346052 142383850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691848 M 185 1 0 "" NA19239 nsv946657 1 142358729 142368414 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584575,nssv2584570,nssv2584568,nssv2584565,nssv2584572,nssv2584567,nssv2584569,nssv2584576,nssv2584573,nssv2584574,nssv2584566,nssv2584571 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv435998 1 142367725 142368714 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465510 M 2 1 0 "" NA15510 nsv946658 1 142368414 142386182 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584579,nssv2584585,nssv2584586,nssv2584592,nssv2584583,nssv2584593,nssv2584580,nssv2584587,nssv2584584,nssv2584603,nssv2584621,nssv2584601,nssv2584591,nssv2584582,nssv2584620,nssv2584604,nssv2584611,nssv2584610,nssv2584617,nssv2584614,nssv2584608,nssv2584615,nssv2584602,nssv2584622,nssv2584618,nssv2584597,nssv2584588,nssv2584577,nssv2584598,nssv2584616,nssv2584609,nssv2584594,nssv2584581,nssv2584599,nssv2584623,nssv2584619,nssv2584612,nssv2584613,nssv2584607,nssv2584595,nssv2584600,nssv2584578,nssv2584590,nssv2584624,nssv2584606,nssv2584589,nssv2584605,nssv2584596 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv185e59 1 142372352 142383750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3335135,esv3342901 M 185 2 0 "" NA12891,NA19240 esv7602 1 142382204 142382370 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30043 M 1 0 0 "" esv27827 1 142436913 142562145 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14295,esv15583,esv19923,esv11765,esv13520 M 40 10 0 LINC00875,LINC01138,LOC100130000,MIR6077-1,MIR6077-2,PPIAL4G NA11894,NA11931,NA11995,NA12004,NA12006,NA12776,NA15510,NA18505,NA18909,NA19108 nsv946218 1 142437335 142512695 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787305,nssv1787328,nssv1787291,nssv1787329,nssv1787293,nssv1788300,nssv1787302,nssv1788263,nssv1787289,nssv1787331,nssv1788291,nssv1788275,nssv1788292,nssv1788279,nssv1788297,nssv1787325,nssv1788293,nssv1787326,nssv1788290,nssv1788262,nssv1788288,nssv1788307,nssv1787294,nssv1788283,nssv1787298,nssv1788269,nssv1787308,nssv1787313,nssv1787299,nssv1788272,nssv1787290,nssv1788305,nssv1787295,nssv1788256,nssv1787300,nssv1788265,nssv1787303,nssv1788281,nssv1788295,nssv1788306,nssv1787297,nssv1788273,nssv1787304,nssv1788277,nssv1787311,nssv1788276,nssv1787301,nssv1788285,nssv1787315,nssv1788268,nssv1787307,nssv1788304,nssv1788294,nssv1788264,nssv1788296,nssv1788259,nssv1788289,nssv1788267,nssv1787288,nssv1788298,nssv1787309,nssv1788266,nssv1787318,nssv1787319,nssv1787316,nssv1788301,nssv1787292,nssv1788274,nssv1787296,nssv1787330,nssv1787306,nssv1788299,nssv1787312,nssv1787314,nssv1788257,nssv1787327,nssv1788286,nssv1787287,nssv1788261,nssv1787322,nssv1788282,nssv1788302,nssv1787321,nssv1787310,nssv1788271,nssv1788260,nssv1788270,nssv1787323,nssv1788303,nssv1787320,nssv1787317,nssv1788280,nssv1787324,nssv1788258,nssv1788284,nssv1788278,nssv1788287 M 97 10 0 LINC00875,LINC01138,LOC100130000,MIR6077-1,MIR6077-2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547650 1 142454940 142516572 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723054 M 17421 0 1 LINC00875,LINC01138,LOC100130000,MIR6077-1,MIR6077-2 dgv5n82 1 142513679 142561578 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946659,nsv946219 M 97 10 0 LINC00875,LINC01138,PPIAL4G HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3345064 1 142518352 142521050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691855 M 185 1 0 LINC00875,LINC01138 NA12892 esv3417038 1 142518352 142523950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691856 M 185 1 0 LINC00875,LINC01138 NA12878 esv3448266 1 142553952 142556050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691857 M 185 1 0 "" NA12878 nsv946660 1 142561578 142562697 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584638,nssv2584644,nssv2584645,nssv2584636,nssv2584642,nssv2584640,nssv2584643,nssv2584641,nssv2584639,nssv2584646,nssv2584637 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv27918 1 142612557 142807102 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10412,esv10881,esv15133,esv15762,esv21058,esv13234 M 40 20 2 "" NA07045,NA11931,NA12004,NA12006,NA12239,NA12287,NA12489,NA12776,NA15510,NA18505,NA18511,NA18523,NA18907,NA18909,NA18916,NA19108,NA19129,NA19147,NA19190,NA19240,NA19257 nsv946220 1 142617060 142673143 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788414,nssv1788406,nssv1788408,nssv1788413,nssv1788411,nssv1788409,nssv1788412,nssv1788405,nssv1788407,nssv1788415,nssv1788410 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv428212 1 142642781 144194710 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv451320,nssv451208,nssv451243,nssv451265,nssv451331,nssv451219,nssv451175,nssv451254,nssv451186,nssv451230,nssv451197,nssv451309,nssv451298,nssv451164,nssv451287 M 62 14 0 ANKRD34A,HFE2,LINC00623,LIX1L,LOC100288142,LOC101929780,LOC653513,LOC728875,NBPF12,NBPF8,NBPF9,NOTCH2NL,PDE4DIP,PFN1P2,POLR3GL,PPIAL4A,PPIAL4B,PPIAL4C,SEC22B,TXNIP HGDP00449,HGDP00450,HGDP00460,HGDP00462,HGDP00463,HGDP00471,HGDP00472,HGDP00476,HGDP00986,HGDP01089,HGDP01094,NA18916,NA19257 nsv10805 1 142645766 142648634 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17757,nssv20082,nssv18068,nssv22110 M 31 4 0 "" NA12155,NA18502,NA19132,NA19221 nsv831259 1 142646350 142720164 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449529,nssv1449495,nssv1449506,nssv1449484,nssv1449518 M 95 5 0 "" nsv831270 1 142646350 142797217 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449540 M 95 1 0 "" nsv10816 1 142649584 142650424 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv18436 M 31 1 0 "" NA18552 nsv7881 1 142651275 142651488 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv16105,nssv18087 M 31 0 2 "" NA18980,NA19132 nsv7892 1 142652581 142652996 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19097 M 31 1 0 "" NA18563 nsv7903 1 142653780 142654885 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv18447,nssv22440,nssv18428 M 31 3 0 "" NA12155,NA19132,NA19221 nsv7914 1 142657675 142658460 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv18758,nssv20412,nssv18777 M 31 3 0 "" NA12155,NA18502,NA19132 nsv7925 1 142659356 142660290 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17098,nssv25459 M 31 2 0 "" NA18972,NA19144 nsv946221 1 142673143 142680142 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788431,nssv1786739,nssv1788424,nssv1788456,nssv1786742,nssv1786736,nssv1786745,nssv1788465,nssv1788430,nssv1788439,nssv1786747,nssv1786757,nssv1786744,nssv1788458,nssv1788429,nssv1786724,nssv1788435,nssv1788446,nssv1788445,nssv1786729,nssv1788447,nssv1786719,nssv1788427,nssv1788451,nssv1788420,nssv1788455,nssv1788425,nssv1788461,nssv1788428,nssv1786716,nssv1788444,nssv1786741,nssv1788441,nssv1786722,nssv1786749,nssv1786735,nssv1788438,nssv1786727,nssv1788419,nssv1786717,nssv1788440,nssv1786738,nssv1788432,nssv1788449,nssv1786743,nssv1786756,nssv1788433,nssv1788457,nssv1788421,nssv1786726,nssv1786751,nssv1786733,nssv1788418,nssv1786761,nssv1788422,nssv1788442,nssv1788436,nssv1786737,nssv1786746,nssv1786759,nssv1788423,nssv1786752,nssv1786748,nssv1788463,nssv1788437,nssv1786721,nssv1788417,nssv1788454,nssv1788434,nssv1788452,nssv1788426,nssv1788416,nssv1786750,nssv1788459,nssv1788448,nssv1788464,nssv1786723,nssv1788450,nssv1786731,nssv1786730,nssv1786740,nssv1786718,nssv1788453,nssv1788460,nssv1786732,nssv1786754,nssv1786758,nssv1786760,nssv1786753,nssv1788462,nssv1786720,nssv1786725,nssv1786755,nssv1786728,nssv1788443,nssv1788466,nssv1786734 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547651 1 142675840 142773898 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723055 M 17421 0 1 "" nsv946661 1 142680142 142685514 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584657,nssv2584648,nssv2584653,nssv2584655,nssv2584656,nssv2584647,nssv2584654,nssv2584652,nssv2584650,nssv2584651,nssv2584649 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv824353 1 142684203 142730808 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1429583 M 31 1 0 "" AK14 nsv946222 1 142685514 142807280 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786769,nssv1786766,nssv1786768,nssv1786762,nssv1786765,nssv1786767,nssv1786771,nssv1786770,nssv1786764,nssv1786772,nssv1786763 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1015024 1 142693888 142725034 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498321 M 29084 1 0 "" nsv1010171 1 142693888 142740501 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491883 M 29084 1 0 "" nsv1003232 1 142693888 142749572 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483385,nssv3497044,nssv3487222,nssv3493130 M 29084 3 1 "" nsv1003402 1 142693888 142756647 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486161 M 29084 0 1 "" dgv312n100 1 142693888 142770353 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012942,nsv1010411 M 29084 3 0 "" nsv1010181 1 142693888 142778435 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501039,nssv3702085,nssv3487929,nssv3485472,nssv3489796,nssv3496396,nssv3488906 M 29084 3 4 "" esv2761652 1 142693888 142792400 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6995678 M 1109 1 0 "" SW_1357 esv2762186 1 142693888 142792400 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006205 M 1109 0 1 "" RW_0183 nsv1003536 1 142693888 143049274 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487453,nssv3489454,nssv3483577,nssv3493778,nssv3487628,nssv3501676,nssv3495599,nssv3499743,nssv3493178,nssv3495429,nssv3484524,nssv3501885,nssv3500736,nssv3488094,nssv3489738 M 29084 13 2 LINC00623,LOC100288142,LOC728875 dgv313n100 1 142693888 143271947 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997876,nsv1006612,nsv1000552,nsv1004765,nsv1003583,nsv1002681,nsv1005946,nsv1007246 M 29084 16 0 LINC00623,LOC100288142,LOC728875,PPIAL4A,PPIAL4B,PPIAL4C dgv314n100 1 142693888 143393453 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012104,nsv1002373,nsv1007748 M 29084 13 0 LINC00623,LOC100288142,LOC653513,LOC728875,NBPF12,NBPF8,NBPF9,PFN1P2,PPIAL4A,PPIAL4B,PPIAL4C dgv315n100 1 142693888 143661320 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001989,nsv1006330,nsv1010163,nsv1010670,nsv1014985,nsv997949 M 29084 8 0 LINC00623,LOC100288142,LOC653513,LOC728875,NBPF12,NBPF8,NBPF9,PDE4DIP,PFN1P2,PPIAL4A,PPIAL4B,PPIAL4C dgv316n100 1 142693888 144001649 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012742,nsv1003784 M 29084 2 0 LINC00623,LOC100288142,LOC101929780,LOC653513,LOC728875,NBPF12,NBPF8,NBPF9,NOTCH2NL,PDE4DIP,PFN1P2,PPIAL4A,PPIAL4B,PPIAL4C,SEC22B esv2516798 1 142697781 142735690 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5213959 M 1 1 0 "" NA18507 nsv7936 1 142702569 142707103 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22768 M 31 0 1 "" NA19221 dgv317n100 1 142716044 143049274 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008597,nsv1011338 M 29084 0 5 LINC00623,LOC100288142,LOC728875 esv8055 1 142718077 142718270 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30496 M 1 0 0 "" nsv7947 1 142719250 142805650 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23086 M 31 0 1 "" NA19221 nsv1004786 1 142727195 142762284 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489120 M 29084 0 1 "" nsv1002247 1 142727195 142778435 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492311,nssv3487371,nssv3492122,nssv3499835 M 29084 1 3 "" nsv997678 1 142748094 143049274 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485438 M 29084 1 0 LINC00623,LOC100288142,LOC728875 esv22978 1 142857165 142935791 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10688,esv11879,esv18799 M 40 6 0 LOC100288142 NA11931,NA11993,NA12414,NA18523,NA18916,NA19099 nsv946224 1 142858099 142868213 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584659,nssv2584694,nssv2584665,nssv2584692,nssv2584669,nssv2584708,nssv2584730,nssv2584706,nssv2585352,nssv2584696,nssv2584687,nssv2584714,nssv2584661,nssv2584719,nssv2585351,nssv2584720,nssv2584676,nssv2584707,nssv2584664,nssv2584705,nssv2585353,nssv2584698,nssv2584679,nssv2584703,nssv2584674,nssv2584699,nssv2584673,nssv2584726,nssv2585349,nssv2584722,nssv2584662,nssv2584691,nssv2584728,nssv2584724,nssv2585348,nssv2584715,nssv2584675,nssv2584702,nssv2584670,nssv2584721,nssv2584668,nssv2584684,nssv2584680,nssv2584697,nssv2584671,nssv2584727,nssv2584686,nssv2584713,nssv2584689,nssv2584700,nssv2585347,nssv2584701,nssv2585350,nssv2584693,nssv2584678,nssv2584718,nssv2584682,nssv2584725,nssv2584677,nssv2584690,nssv2584660,nssv2584695,nssv2584672,nssv2584704,nssv2584666,nssv2584658,nssv2584667,nssv2584723,nssv2584663,nssv2584681,nssv2584729,nssv2584688,nssv2584717,nssv2584709,nssv2584685,nssv2584683,nssv2584710,nssv2584712,nssv2584716,nssv2584711 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946223 1 142858099 142936051 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786791,nssv1786811,nssv1786856,nssv1786840,nssv1786853,nssv1786773,nssv1786777,nssv1786816,nssv1786780,nssv1786863,nssv1786798,nssv1786862,nssv1786855,nssv1786819,nssv1786801,nssv1786842,nssv1786782,nssv1786861,nssv1786802,nssv1786836,nssv1786850,nssv1786818,nssv1786776,nssv1786844,nssv1786785,nssv1786817,nssv1786779,nssv1786865,nssv1786775,nssv1786810,nssv1786794,nssv1786832,nssv1786857,nssv1786812,nssv1786787,nssv1786837,nssv1786792,nssv1786821,nssv1786790,nssv1786800,nssv1786788,nssv1786825,nssv1786784,nssv1786814,nssv1786859,nssv1786830,nssv1786851,nssv1786835,nssv1786789,nssv1786864,nssv1786797,nssv1786805,nssv1786793,nssv1786827,nssv1786795,nssv1786796,nssv1786774,nssv1786843,nssv1786804,nssv1786849,nssv1786858,nssv1786846,nssv1786786,nssv1786823,nssv1786778,nssv1786838,nssv1786783,nssv1786803,nssv1786854,nssv1786808,nssv1786852,nssv1786824,nssv1786781,nssv1786834,nssv1786860,nssv1786867,nssv1786841,nssv1786826,nssv1786829,nssv1786847,nssv1786839,nssv1786845,nssv1786869,nssv1786809,nssv1786831,nssv1786815,nssv1786820,nssv1786822,nssv1786806,nssv1786813,nssv1786799,nssv1786828,nssv1786833,nssv1786866,nssv1786807,nssv1786848,nssv1786868 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv186e59 1 142870052 142878450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3332566,esv3352492 M 185 2 0 LOC100288142 NA19239,NA19240 dgv187e59 1 142870052 142935850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3382421,esv3383164,esv3381838,esv3384918 M 185 4 0 LOC100288142 NA12878,NA12891,NA12892,NA19238 nsv946662 1 142870135 142872060 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585391,nssv2585357,nssv2585422,nssv2585440,nssv2585355,nssv2585368,nssv2585399,nssv2585393,nssv2585421,nssv2585385,nssv2585395,nssv2585436,nssv2585392,nssv2585443,nssv2585397,nssv2585363,nssv2585416,nssv2585376,nssv2585423,nssv2585442,nssv2585408,nssv2585444,nssv2585431,nssv2585441,nssv2585415,nssv2585439,nssv2585364,nssv2585378,nssv2585434,nssv2585394,nssv2585407,nssv2585366,nssv2585400,nssv2585384,nssv2585425,nssv2585438,nssv2585428,nssv2585372,nssv2585424,nssv2585380,nssv2585433,nssv2585361,nssv2585358,nssv2585370,nssv2585417,nssv2585435,nssv2585420,nssv2585375,nssv2585403,nssv2585383,nssv2585430,nssv2585373,nssv2585388,nssv2585374,nssv2585411,nssv2585396,nssv2585412,nssv2585367,nssv2585418,nssv2585386,nssv2585426,nssv2585437,nssv2585413,nssv2585379,nssv2585427,nssv2585371,nssv2585406,nssv2585390,nssv2585409,nssv2585377,nssv2585401,nssv2585387,nssv2585410,nssv2585360,nssv2585432,nssv2585369,nssv2585429,nssv2585356,nssv2585419,nssv2585382,nssv2585414,nssv2585389,nssv2585402,nssv2585381,nssv2585354,nssv2585362,nssv2585405,nssv2585445,nssv2585398,nssv2585404,nssv2585365,nssv2585359 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946663 1 142872060 142873473 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585517,nssv2585501,nssv2585477,nssv2585493,nssv2585530,nssv2585479,nssv2585534,nssv2585535,nssv2585536,nssv2585469,nssv2585461,nssv2585476,nssv2585471,nssv2585494,nssv2585470,nssv2585485,nssv2585475,nssv2585483,nssv2585468,nssv2585480,nssv2585518,nssv2585497,nssv2585525,nssv2585496,nssv2585448,nssv2585506,nssv2585516,nssv2585487,nssv2585460,nssv2585528,nssv2585458,nssv2585509,nssv2585454,nssv2585510,nssv2585465,nssv2585495,nssv2585466,nssv2585492,nssv2585447,nssv2585488,nssv2585462,nssv2585526,nssv2585520,nssv2585531,nssv2585457,nssv2585482,nssv2585452,nssv2585472,nssv2585521,nssv2585505,nssv2585450,nssv2585498,nssv2585453,nssv2585499,nssv2585459,nssv2585473,nssv2585451,nssv2585503,nssv2585456,nssv2585486,nssv2585464,nssv2585512,nssv2585519,nssv2585484,nssv2585455,nssv2585511,nssv2585467,nssv2585481,nssv2585533,nssv2585446,nssv2585524,nssv2585478,nssv2585474,nssv2585491,nssv2585529,nssv2585508,nssv2585522,nssv2585515,nssv2585523,nssv2585490,nssv2585449,nssv2585489,nssv2585463,nssv2585514,nssv2585507,nssv2585504,nssv2585502,nssv2585537,nssv2585513,nssv2585500,nssv2585527,nssv2585532 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946664 1 142873473 142876114 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585541,nssv2585599,nssv2585626,nssv2585610,nssv2585623,nssv2585586,nssv2585569,nssv2585596,nssv2585542,nssv2585614,nssv2585575,nssv2585577,nssv2585558,nssv2585608,nssv2585574,nssv2585617,nssv2585572,nssv2585591,nssv2585621,nssv2585607,nssv2585627,nssv2585598,nssv2585559,nssv2585613,nssv2585557,nssv2585600,nssv2585579,nssv2585539,nssv2585548,nssv2585605,nssv2585620,nssv2585595,nssv2585567,nssv2585590,nssv2585556,nssv2585540,nssv2585628,nssv2585584,nssv2585622,nssv2585589,nssv2585553,nssv2585603,nssv2585545,nssv2585588,nssv2585581,nssv2585604,nssv2585570,nssv2585582,nssv2585629,nssv2585547,nssv2585566,nssv2585550,nssv2585561,nssv2585576,nssv2585554,nssv2585593,nssv2585578,nssv2585612,nssv2585546,nssv2585606,nssv2585624,nssv2585619,nssv2585564,nssv2585615,nssv2585565,nssv2585585,nssv2585552,nssv2585618,nssv2585563,nssv2585543,nssv2585562,nssv2585580,nssv2585625,nssv2585616,nssv2585571,nssv2585611,nssv2585555,nssv2585583,nssv2585568,nssv2585602,nssv2585551,nssv2585592,nssv2585560,nssv2585609,nssv2585573,nssv2585587,nssv2585601,nssv2585538,nssv2585594,nssv2585544,nssv2585597,nssv2585549 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946665 1 142876114 142876832 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586213,nssv2586227,nssv2586200,nssv2585635,nssv2585647,nssv2586218,nssv2586210,nssv2586208,nssv2586198,nssv2586214,nssv2585654,nssv2586211,nssv2585645,nssv2586225,nssv2585648,nssv2585972,nssv2586197,nssv2586220,nssv2586206,nssv2585963,nssv2586209,nssv2586217,nssv2585651,nssv2586215,nssv2586202,nssv2586219,nssv2585984,nssv2586207,nssv2585979,nssv2585959,nssv2585982,nssv2585957,nssv2586195,nssv2586224,nssv2585632,nssv2586204,nssv2586203,nssv2585960,nssv2585639,nssv2585965,nssv2585985,nssv2585968,nssv2585642,nssv2585974,nssv2585986,nssv2585962,nssv2586201,nssv2585961,nssv2585653,nssv2585634,nssv2585646,nssv2585973,nssv2586212,nssv2586226,nssv2585637,nssv2585989,nssv2585650,nssv2585630,nssv2585987,nssv2585976,nssv2585980,nssv2585969,nssv2585649,nssv2585967,nssv2585988,nssv2585631,nssv2586196,nssv2586228,nssv2585652,nssv2585975,nssv2585643,nssv2585638,nssv2586205,nssv2585958,nssv2586199,nssv2585966,nssv2585636,nssv2586221,nssv2585981,nssv2585971,nssv2585644,nssv2585641,nssv2585633,nssv2585977,nssv2585983,nssv2585978,nssv2585640,nssv2586222,nssv2586216,nssv2585964,nssv2585970,nssv2586223 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946666 1 142876832 142877582 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586033,nssv2586046,nssv2586075,nssv2586031,nssv2586030,nssv2586000,nssv2586016,nssv2586001,nssv2585997,nssv2586027,nssv2586032,nssv2585994,nssv2586018,nssv2586048,nssv2586002,nssv2586050,nssv2586009,nssv2586066,nssv2586012,nssv2586043,nssv2586008,nssv2585998,nssv2586025,nssv2585995,nssv2585993,nssv2586056,nssv2586022,nssv2586065,nssv2586026,nssv2586058,nssv2586072,nssv2586081,nssv2586074,nssv2586041,nssv2586021,nssv2586057,nssv2586004,nssv2586060,nssv2586023,nssv2586044,nssv2586013,nssv2586051,nssv2586019,nssv2586042,nssv2586010,nssv2586068,nssv2586077,nssv2586045,nssv2586005,nssv2586063,nssv2585999,nssv2586036,nssv2586076,nssv2586024,nssv2586017,nssv2586054,nssv2586071,nssv2586037,nssv2586006,nssv2586039,nssv2586015,nssv2586067,nssv2586014,nssv2586028,nssv2586078,nssv2586070,nssv2586011,nssv2586047,nssv2586079,nssv2586069,nssv2586073,nssv2586055,nssv2586003,nssv2586035,nssv2586080,nssv2586059,nssv2585996,nssv2586053,nssv2586029,nssv2585990,nssv2586007,nssv2586064,nssv2586020,nssv2586038,nssv2585992,nssv2586040,nssv2586062,nssv2585991,nssv2586061,nssv2586034,nssv2586052,nssv2586049 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946667 1 142877582 142878249 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586092,nssv2586087,nssv2586125,nssv2586145,nssv2586112,nssv2586146,nssv2586095,nssv2586159,nssv2586122,nssv2586136,nssv2586100,nssv2586127,nssv2586163,nssv2586130,nssv2586089,nssv2586141,nssv2586102,nssv2586116,nssv2586167,nssv2586144,nssv2586101,nssv2586162,nssv2586107,nssv2586151,nssv2586170,nssv2586120,nssv2586091,nssv2586143,nssv2586109,nssv2586134,nssv2586164,nssv2586173,nssv2586106,nssv2586119,nssv2586110,nssv2586157,nssv2586108,nssv2586139,nssv2586165,nssv2586086,nssv2586117,nssv2586150,nssv2586097,nssv2586137,nssv2586084,nssv2586140,nssv2586113,nssv2586154,nssv2586166,nssv2586138,nssv2586096,nssv2586082,nssv2586111,nssv2586149,nssv2586094,nssv2586156,nssv2586085,nssv2586161,nssv2586169,nssv2586158,nssv2586168,nssv2586152,nssv2586099,nssv2586128,nssv2586118,nssv2586090,nssv2586088,nssv2586142,nssv2586105,nssv2586126,nssv2586114,nssv2586155,nssv2586124,nssv2586135,nssv2586121,nssv2586160,nssv2586104,nssv2586148,nssv2586098,nssv2586093,nssv2586171,nssv2586083,nssv2586115,nssv2586131,nssv2586172,nssv2586133,nssv2586103,nssv2586147,nssv2586129,nssv2586132,nssv2586153,nssv2586123 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3387507 1 142877852 142878450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691865 M 185 1 0 LOC100288142 NA19239 nsv946668 1 142878249 142878749 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586470,nssv2586462,nssv2586431,nssv2586432,nssv2586490,nssv2586454,nssv2586193,nssv2586465,nssv2586191,nssv2586446,nssv2586489,nssv2586433,nssv2586478,nssv2586450,nssv2586423,nssv2586445,nssv2586427,nssv2586461,nssv2586190,nssv2586459,nssv2586187,nssv2586425,nssv2586430,nssv2586422,nssv2586180,nssv2586453,nssv2586182,nssv2586429,nssv2586188,nssv2586467,nssv2586487,nssv2586456,nssv2586483,nssv2586484,nssv2586475,nssv2586479,nssv2586428,nssv2586438,nssv2586477,nssv2586426,nssv2586194,nssv2586435,nssv2586474,nssv2586480,nssv2586186,nssv2586485,nssv2586424,nssv2586452,nssv2586176,nssv2586440,nssv2586181,nssv2586448,nssv2586476,nssv2586439,nssv2586184,nssv2586434,nssv2586177,nssv2586174,nssv2586178,nssv2586437,nssv2586482,nssv2586455,nssv2586183,nssv2586451,nssv2586175,nssv2586481,nssv2586420,nssv2586449,nssv2586189,nssv2586457,nssv2586473,nssv2586466,nssv2586192,nssv2586463,nssv2586471,nssv2586468,nssv2586185,nssv2586443,nssv2586472,nssv2586458,nssv2586421,nssv2586442,nssv2586486,nssv2586464,nssv2586469,nssv2586447,nssv2586179,nssv2586441,nssv2586460,nssv2586444,nssv2586436,nssv2586488 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946669 1 142878749 142880330 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586524,nssv2586560,nssv2586509,nssv2586526,nssv2586514,nssv2586553,nssv2586563,nssv2586525,nssv2586565,nssv2586552,nssv2586499,nssv2586541,nssv2586569,nssv2586558,nssv2586496,nssv2586559,nssv2586502,nssv2586522,nssv2586507,nssv2586529,nssv2586516,nssv2586519,nssv2586505,nssv2586537,nssv2586579,nssv2586554,nssv2586513,nssv2586550,nssv2586510,nssv2586582,nssv2586520,nssv2586534,nssv2586494,nssv2586545,nssv2586498,nssv2586572,nssv2586523,nssv2586538,nssv2586581,nssv2586548,nssv2586575,nssv2586551,nssv2586512,nssv2586491,nssv2586511,nssv2586577,nssv2586506,nssv2586576,nssv2586497,nssv2586518,nssv2586504,nssv2586561,nssv2586493,nssv2586492,nssv2586521,nssv2586543,nssv2586570,nssv2586531,nssv2586564,nssv2586555,nssv2586501,nssv2586539,nssv2586574,nssv2586533,nssv2586508,nssv2586536,nssv2586568,nssv2586540,nssv2586562,nssv2586532,nssv2586495,nssv2586580,nssv2586567,nssv2586542,nssv2586578,nssv2586556,nssv2586503,nssv2586573,nssv2586566,nssv2586515,nssv2586517,nssv2586527,nssv2586500,nssv2586549,nssv2586571,nssv2586530,nssv2586535,nssv2586546,nssv2586528,nssv2586544,nssv2586547,nssv2586557 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv188e59 1 142879152 142883650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3429178,esv3438732 M 185 2 0 LOC100288142 NA19239,NA19240 nsv946670 1 142880330 142880941 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586597,nssv2586650,nssv2586616,nssv2586633,nssv2586590,nssv2586672,nssv2586602,nssv2586623,nssv2586660,nssv2586642,nssv2586655,nssv2586607,nssv2586613,nssv2586629,nssv2586593,nssv2586617,nssv2586606,nssv2586637,nssv2586588,nssv2586620,nssv2586604,nssv2586632,nssv2586592,nssv2586674,nssv2586612,nssv2586635,nssv2586599,nssv2586583,nssv2586657,nssv2586611,nssv2586600,nssv2586664,nssv2586661,nssv2586649,nssv2586615,nssv2586626,nssv2586658,nssv2586636,nssv2586608,nssv2586646,nssv2586586,nssv2586641,nssv2586659,nssv2586610,nssv2586601,nssv2586625,nssv2586595,nssv2586652,nssv2586667,nssv2586638,nssv2586587,nssv2586640,nssv2586671,nssv2586614,nssv2586603,nssv2586669,nssv2586662,nssv2586644,nssv2586594,nssv2586645,nssv2586596,nssv2586631,nssv2586656,nssv2586584,nssv2586585,nssv2586648,nssv2586609,nssv2586643,nssv2586663,nssv2586622,nssv2586598,nssv2586618,nssv2586589,nssv2586651,nssv2586605,nssv2586624,nssv2586673,nssv2586668,nssv2586666,nssv2586619,nssv2586670,nssv2586621,nssv2586591,nssv2586653,nssv2586654,nssv2586628,nssv2586639,nssv2586647,nssv2586627,nssv2586634,nssv2586665,nssv2586630 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946671 1 142880941 142882428 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586696,nssv2585040,nssv2585078,nssv2585046,nssv2585075,nssv2585041,nssv2586681,nssv2585059,nssv2586707,nssv2586710,nssv2586691,nssv2586715,nssv2586697,nssv2586714,nssv2586686,nssv2585081,nssv2586704,nssv2586711,nssv2585077,nssv2586699,nssv2586682,nssv2585068,nssv2586692,nssv2585052,nssv2586698,nssv2585053,nssv2585079,nssv2585044,nssv2586689,nssv2586712,nssv2586679,nssv2585088,nssv2586694,nssv2586709,nssv2586701,nssv2585080,nssv2586700,nssv2585062,nssv2586693,nssv2585084,nssv2585071,nssv2585051,nssv2586680,nssv2585054,nssv2586688,nssv2585060,nssv2586705,nssv2585090,nssv2585074,nssv2585049,nssv2586687,nssv2585057,nssv2586695,nssv2585042,nssv2585073,nssv2585063,nssv2585087,nssv2586713,nssv2585070,nssv2585050,nssv2586677,nssv2586702,nssv2586684,nssv2585066,nssv2585089,nssv2586676,nssv2586678,nssv2585045,nssv2586683,nssv2586708,nssv2585086,nssv2585055,nssv2585072,nssv2585067,nssv2585076,nssv2586706,nssv2586690,nssv2585056,nssv2585082,nssv2586703,nssv2585083,nssv2585061,nssv2586685,nssv2585043,nssv2585085,nssv2585064,nssv2585065,nssv2585058,nssv2585069,nssv2585047,nssv2585048,nssv2586675 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946672 1 142882428 142883097 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585179,nssv2585154,nssv2585171,nssv2585092,nssv2585113,nssv2585143,nssv2585106,nssv2585152,nssv2585096,nssv2585130,nssv2585170,nssv2585141,nssv2585123,nssv2585177,nssv2585097,nssv2585159,nssv2585117,nssv2585151,nssv2585114,nssv2585146,nssv2585169,nssv2585158,nssv2585167,nssv2585153,nssv2585110,nssv2585173,nssv2585175,nssv2585122,nssv2585112,nssv2585150,nssv2585095,nssv2585135,nssv2585100,nssv2585125,nssv2585163,nssv2585156,nssv2585116,nssv2585176,nssv2585107,nssv2585145,nssv2585103,nssv2585115,nssv2585166,nssv2585091,nssv2585108,nssv2585127,nssv2585102,nssv2585126,nssv2585181,nssv2585147,nssv2585094,nssv2585180,nssv2585164,nssv2585140,nssv2585162,nssv2585137,nssv2585109,nssv2585131,nssv2585120,nssv2585119,nssv2585104,nssv2585160,nssv2585099,nssv2585155,nssv2585105,nssv2585139,nssv2585178,nssv2585129,nssv2585101,nssv2585136,nssv2585174,nssv2585161,nssv2585168,nssv2585128,nssv2585098,nssv2585144,nssv2585121,nssv2585124,nssv2585111,nssv2585133,nssv2585093,nssv2585134,nssv2585165,nssv2585142,nssv2585138,nssv2585172,nssv2585149,nssv2585182,nssv2585157,nssv2585132,nssv2585118,nssv2585148 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946673 1 142883097 142884580 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585193,nssv2585192,nssv2585191,nssv2585185,nssv2585186,nssv2585183,nssv2585187,nssv2585189,nssv2585190,nssv2585194,nssv2585184,nssv2585188 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946674 1 142883097 142885999 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585216,nssv2585248,nssv2585198,nssv2585262,nssv2585206,nssv2585255,nssv2585274,nssv2585249,nssv2585204,nssv2585242,nssv2585273,nssv2585251,nssv2585265,nssv2585237,nssv2585271,nssv2585254,nssv2585199,nssv2585221,nssv2585207,nssv2585231,nssv2585224,nssv2585228,nssv2585214,nssv2585243,nssv2585200,nssv2585227,nssv2585213,nssv2585234,nssv2585205,nssv2585222,nssv2585215,nssv2585240,nssv2585209,nssv2585253,nssv2585217,nssv2585239,nssv2585266,nssv2585245,nssv2585226,nssv2585232,nssv2585202,nssv2585252,nssv2585272,nssv2585236,nssv2585208,nssv2585195,nssv2585223,nssv2585257,nssv2585268,nssv2585261,nssv2585197,nssv2585241,nssv2585219,nssv2585263,nssv2585267,nssv2585260,nssv2585210,nssv2585218,nssv2585201,nssv2585247,nssv2585203,nssv2585230,nssv2585211,nssv2585238,nssv2585212,nssv2585235,nssv2585269,nssv2585225,nssv2585196,nssv2585229,nssv2585270,nssv2585259,nssv2585220,nssv2585233,nssv2585250,nssv2585256,nssv2585258,nssv2585264,nssv2585246,nssv2585244 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3383314 1 142884252 142886950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691868 M 185 1 0 LOC100288142 NA19240 esv3351836 1 142884252 142889850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691869 M 185 1 0 LOC100288142 NA19239 nsv946675 1 142884580 142885999 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585282,nssv2585276,nssv2585284,nssv2585279,nssv2585278,nssv2585285,nssv2585277,nssv2585283,nssv2585281,nssv2585275,nssv2585286,nssv2585280 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946676 1 142885999 142886499 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585301,nssv2585343,nssv2585306,nssv2585329,nssv2585671,nssv2585339,nssv2585293,nssv2585680,nssv2585307,nssv2585328,nssv2585291,nssv2585655,nssv2585292,nssv2585662,nssv2585316,nssv2585685,nssv2585672,nssv2585287,nssv2585288,nssv2585314,nssv2585667,nssv2585317,nssv2585666,nssv2585656,nssv2585669,nssv2585321,nssv2585684,nssv2585341,nssv2585668,nssv2585663,nssv2585300,nssv2585335,nssv2585308,nssv2585337,nssv2585294,nssv2585320,nssv2585305,nssv2585345,nssv2585299,nssv2585661,nssv2585311,nssv2585338,nssv2585674,nssv2585323,nssv2585673,nssv2585310,nssv2585303,nssv2585679,nssv2585297,nssv2585676,nssv2585290,nssv2585334,nssv2585678,nssv2585325,nssv2585318,nssv2585326,nssv2585315,nssv2585322,nssv2585309,nssv2585340,nssv2585296,nssv2585336,nssv2585682,nssv2585660,nssv2585289,nssv2585346,nssv2585681,nssv2585333,nssv2585670,nssv2585332,nssv2585677,nssv2585657,nssv2585298,nssv2585324,nssv2585304,nssv2585675,nssv2585302,nssv2585659,nssv2585312,nssv2585331,nssv2585665,nssv2585658,nssv2585295,nssv2585683,nssv2585319,nssv2585664,nssv2585313,nssv2585330,nssv2585344,nssv2585686,nssv2585342,nssv2585327 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946677 1 142886499 142887260 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585711,nssv2585748,nssv2585718,nssv2585734,nssv2585774,nssv2585761,nssv2585771,nssv2585735,nssv2585710,nssv2585750,nssv2585773,nssv2585722,nssv2585708,nssv2585746,nssv2585720,nssv2585753,nssv2585775,nssv2585747,nssv2585703,nssv2585687,nssv2585723,nssv2585738,nssv2585777,nssv2585692,nssv2585727,nssv2585698,nssv2585712,nssv2585760,nssv2585702,nssv2585699,nssv2585704,nssv2585751,nssv2585776,nssv2585739,nssv2585697,nssv2585731,nssv2585721,nssv2585691,nssv2585716,nssv2585768,nssv2585728,nssv2585766,nssv2585770,nssv2585754,nssv2585696,nssv2585763,nssv2585717,nssv2585765,nssv2585701,nssv2585756,nssv2585730,nssv2585752,nssv2585778,nssv2585729,nssv2585705,nssv2585733,nssv2585689,nssv2585741,nssv2585719,nssv2585757,nssv2585709,nssv2585759,nssv2585707,nssv2585764,nssv2585715,nssv2585695,nssv2585700,nssv2585688,nssv2585769,nssv2585762,nssv2585693,nssv2585726,nssv2585706,nssv2585755,nssv2585714,nssv2585767,nssv2585724,nssv2585758,nssv2585690,nssv2585745,nssv2585694,nssv2585740,nssv2585772,nssv2585736,nssv2585713,nssv2585725,nssv2585732,nssv2585744,nssv2585749,nssv2585743,nssv2585737,nssv2585742 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946678 1 142887260 142888736 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585801,nssv2585860,nssv2585862,nssv2585865,nssv2585789,nssv2585833,nssv2585795,nssv2585825,nssv2585799,nssv2585837,nssv2585804,nssv2585835,nssv2585853,nssv2585836,nssv2585851,nssv2585779,nssv2585809,nssv2585870,nssv2585781,nssv2585844,nssv2585854,nssv2585830,nssv2585798,nssv2585847,nssv2585869,nssv2585810,nssv2585856,nssv2585843,nssv2585796,nssv2585820,nssv2585794,nssv2585861,nssv2585863,nssv2585824,nssv2585782,nssv2585826,nssv2585855,nssv2585817,nssv2585787,nssv2585823,nssv2585797,nssv2585827,nssv2585812,nssv2585814,nssv2585788,nssv2585842,nssv2585811,nssv2585839,nssv2585858,nssv2585813,nssv2585802,nssv2585828,nssv2585805,nssv2585831,nssv2585786,nssv2585846,nssv2585785,nssv2585819,nssv2585793,nssv2585832,nssv2585867,nssv2585838,nssv2585808,nssv2585864,nssv2585859,nssv2585815,nssv2585790,nssv2585849,nssv2585852,nssv2585822,nssv2585850,nssv2585806,nssv2585783,nssv2585807,nssv2585800,nssv2585848,nssv2585791,nssv2585821,nssv2585866,nssv2585829,nssv2585857,nssv2585803,nssv2585792,nssv2585780,nssv2585784,nssv2585868,nssv2585816,nssv2585840,nssv2585845,nssv2585841,nssv2585818,nssv2585834 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3377017 1 142887452 142889950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691870 M 185 1 0 LOC100288142 NA19240 nsv946679 1 142888736 142889395 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586246,nssv2586283,nssv2586304,nssv2586263,nssv2585879,nssv2586250,nssv2586231,nssv2586240,nssv2586287,nssv2586270,nssv2585886,nssv2586256,nssv2586236,nssv2586298,nssv2586301,nssv2586266,nssv2585878,nssv2586280,nssv2586297,nssv2586265,nssv2585883,nssv2585871,nssv2585876,nssv2586252,nssv2586230,nssv2586274,nssv2586293,nssv2586273,nssv2585881,nssv2586255,nssv2585880,nssv2586262,nssv2586300,nssv2586259,nssv2586292,nssv2586299,nssv2586238,nssv2586294,nssv2585884,nssv2586248,nssv2586288,nssv2586244,nssv2586245,nssv2586279,nssv2586233,nssv2586267,nssv2586285,nssv2586249,nssv2585877,nssv2586269,nssv2586242,nssv2586261,nssv2585885,nssv2586278,nssv2586229,nssv2586275,nssv2586284,nssv2586254,nssv2586239,nssv2585872,nssv2586289,nssv2586277,nssv2586234,nssv2586268,nssv2586232,nssv2586247,nssv2586291,nssv2586271,nssv2585874,nssv2586260,nssv2586235,nssv2586253,nssv2586303,nssv2586251,nssv2585873,nssv2586272,nssv2585882,nssv2586241,nssv2586290,nssv2586281,nssv2586243,nssv2586276,nssv2586296,nssv2586237,nssv2585875,nssv2586282,nssv2586286,nssv2586302,nssv2586295,nssv2586264,nssv2586258,nssv2586257 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946680 1 142889395 142890882 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586337,nssv2586349,nssv2586336,nssv2586361,nssv2586389,nssv2586352,nssv2586326,nssv2586351,nssv2586315,nssv2586332,nssv2586306,nssv2586370,nssv2586320,nssv2586354,nssv2586393,nssv2586339,nssv2586322,nssv2586357,nssv2586381,nssv2586305,nssv2586380,nssv2586328,nssv2586392,nssv2586396,nssv2586313,nssv2586347,nssv2586319,nssv2586359,nssv2586379,nssv2586340,nssv2586318,nssv2586369,nssv2586384,nssv2586345,nssv2586325,nssv2586346,nssv2586311,nssv2586344,nssv2586376,nssv2586368,nssv2586383,nssv2586386,nssv2586312,nssv2586373,nssv2586330,nssv2586335,nssv2586316,nssv2586355,nssv2586321,nssv2586358,nssv2586382,nssv2586391,nssv2586324,nssv2586353,nssv2586378,nssv2586342,nssv2586333,nssv2586366,nssv2586317,nssv2586390,nssv2586327,nssv2586385,nssv2586310,nssv2586372,nssv2586314,nssv2586343,nssv2586307,nssv2586331,nssv2586375,nssv2586362,nssv2586334,nssv2586364,nssv2586388,nssv2586356,nssv2586308,nssv2586350,nssv2586377,nssv2586387,nssv2586309,nssv2586360,nssv2586329,nssv2586394,nssv2586395,nssv2586338,nssv2586323,nssv2586341,nssv2586367,nssv2586374,nssv2586363,nssv2586365,nssv2586371,nssv2586348 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3333864 1 142890452 142923350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691871 M 185 1 0 LOC100288142 NA19240 nsv946681 1 142890882 142892299 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577386,nssv2577378,nssv2586407,nssv2577359,nssv2577380,nssv2577362,nssv2586406,nssv2577348,nssv2577384,nssv2577365,nssv2586417,nssv2577361,nssv2586416,nssv2577369,nssv2577383,nssv2586397,nssv2586414,nssv2577352,nssv2586410,nssv2577363,nssv2586400,nssv2577332,nssv2586412,nssv2577357,nssv2586398,nssv2577368,nssv2586409,nssv2577354,nssv2577338,nssv2577389,nssv2577379,nssv2577372,nssv2577334,nssv2577350,nssv2586404,nssv2577373,nssv2586411,nssv2577356,nssv2586408,nssv2577345,nssv2577388,nssv2577355,nssv2577340,nssv2577344,nssv2586413,nssv2577349,nssv2586405,nssv2577367,nssv2577333,nssv2577351,nssv2577382,nssv2577347,nssv2586403,nssv2577346,nssv2586402,nssv2577374,nssv2577387,nssv2577342,nssv2586418,nssv2577343,nssv2577385,nssv2577360,nssv2577381,nssv2577370,nssv2577337,nssv2577371,nssv2586401,nssv2577335,nssv2586419,nssv2577358,nssv2586399,nssv2577341,nssv2586415,nssv2577353,nssv2577364,nssv2577366,nssv2577336,nssv2577339,nssv2577375,nssv2577377,nssv2577376 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946682 1 142890882 142893560 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577393,nssv2577390,nssv2577392,nssv2577400,nssv2577397,nssv2577398,nssv2577399,nssv2577395,nssv2577396,nssv2577391,nssv2577394 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3428298 1 142891052 142912250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691872 M 185 1 0 LOC100288142 NA19239 nsv946683 1 142892299 142893560 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577478,nssv2577449,nssv2577421,nssv2577428,nssv2577480,nssv2577457,nssv2577474,nssv2577456,nssv2577427,nssv2577465,nssv2577416,nssv2577441,nssv2577424,nssv2577458,nssv2577404,nssv2577460,nssv2577473,nssv2577401,nssv2577479,nssv2577461,nssv2577430,nssv2577432,nssv2577419,nssv2577434,nssv2577410,nssv2577443,nssv2577403,nssv2577466,nssv2577472,nssv2577447,nssv2577423,nssv2577450,nssv2577411,nssv2577462,nssv2577413,nssv2577425,nssv2577481,nssv2577435,nssv2577407,nssv2577437,nssv2577412,nssv2577459,nssv2577476,nssv2577446,nssv2577422,nssv2577455,nssv2577405,nssv2577452,nssv2577418,nssv2577468,nssv2577433,nssv2577469,nssv2577406,nssv2577454,nssv2577431,nssv2577439,nssv2577426,nssv2577438,nssv2577417,nssv2577467,nssv2577414,nssv2577451,nssv2577477,nssv2577436,nssv2577475,nssv2577448,nssv2577408,nssv2577442,nssv2577420,nssv2577464,nssv2577415,nssv2577445,nssv2577409,nssv2577453,nssv2577470,nssv2577402,nssv2577463,nssv2577440,nssv2577429,nssv2577444,nssv2577471 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946684 1 142893560 142894243 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577568,nssv2577550,nssv2577571,nssv2577530,nssv2577512,nssv2577554,nssv2577504,nssv2577556,nssv2577488,nssv2577545,nssv2577517,nssv2577483,nssv2577497,nssv2577559,nssv2577567,nssv2577531,nssv2577485,nssv2577558,nssv2577563,nssv2577546,nssv2577498,nssv2577527,nssv2577506,nssv2577482,nssv2577569,nssv2577543,nssv2577507,nssv2577487,nssv2577521,nssv2577533,nssv2577565,nssv2577548,nssv2577515,nssv2577552,nssv2577503,nssv2577560,nssv2577570,nssv2577544,nssv2577494,nssv2577537,nssv2577510,nssv2577555,nssv2577564,nssv2577520,nssv2577511,nssv2577490,nssv2577518,nssv2577516,nssv2577502,nssv2577561,nssv2577496,nssv2577549,nssv2577501,nssv2577523,nssv2577489,nssv2577492,nssv2577566,nssv2577551,nssv2577522,nssv2577542,nssv2577495,nssv2577573,nssv2577572,nssv2577486,nssv2577505,nssv2577538,nssv2577508,nssv2577547,nssv2577513,nssv2577534,nssv2577499,nssv2577562,nssv2577500,nssv2577536,nssv2577509,nssv2577493,nssv2577491,nssv2577532,nssv2577484,nssv2577541,nssv2577514,nssv2577525,nssv2577524,nssv2577528,nssv2577553,nssv2577535,nssv2577519,nssv2577526,nssv2577557,nssv2577539,nssv2577540,nssv2577529 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946685 1 142894243 142894837 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578589,nssv2577633,nssv2577590,nssv2577623,nssv2577592,nssv2577622,nssv2577598,nssv2577610,nssv2577593,nssv2577606,nssv2577583,nssv2578565,nssv2577595,nssv2577630,nssv2577605,nssv2577615,nssv2577584,nssv2577597,nssv2578581,nssv2578564,nssv2578577,nssv2578567,nssv2578582,nssv2577624,nssv2577577,nssv2578578,nssv2578575,nssv2577608,nssv2578571,nssv2577635,nssv2577575,nssv2577628,nssv2577591,nssv2577637,nssv2577576,nssv2577619,nssv2577580,nssv2577614,nssv2578586,nssv2577617,nssv2577587,nssv2577612,nssv2577596,nssv2577634,nssv2577585,nssv2577631,nssv2577589,nssv2577639,nssv2577579,nssv2577625,nssv2577602,nssv2578584,nssv2577586,nssv2577613,nssv2578574,nssv2578579,nssv2577588,nssv2578587,nssv2578569,nssv2577618,nssv2578573,nssv2577574,nssv2578588,nssv2577636,nssv2577578,nssv2577626,nssv2577594,nssv2577600,nssv2578585,nssv2577638,nssv2577603,nssv2577601,nssv2578568,nssv2577620,nssv2578570,nssv2577607,nssv2578576,nssv2578580,nssv2578572,nssv2577627,nssv2577581,nssv2577604,nssv2577599,nssv2577621,nssv2577582,nssv2577616,nssv2578566,nssv2577632,nssv2577609,nssv2577611,nssv2577629,nssv2578583 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946686 1 142894837 142895678 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577089,nssv2577078,nssv2577095,nssv2577055,nssv2577026,nssv2577060,nssv2577046,nssv2577097,nssv2577087,nssv2577077,nssv2577032,nssv2577103,nssv2577027,nssv2577056,nssv2578592,nssv2577084,nssv2577035,nssv2577075,nssv2578591,nssv2577066,nssv2577037,nssv2577102,nssv2577100,nssv2577074,nssv2577041,nssv2577058,nssv2577036,nssv2577062,nssv2578595,nssv2577067,nssv2577094,nssv2577083,nssv2578594,nssv2577049,nssv2577039,nssv2577061,nssv2577104,nssv2577051,nssv2577024,nssv2577071,nssv2577028,nssv2577076,nssv2577090,nssv2577040,nssv2577107,nssv2577069,nssv2578596,nssv2577054,nssv2577096,nssv2577073,nssv2578593,nssv2577068,nssv2577048,nssv2577081,nssv2577105,nssv2577108,nssv2577038,nssv2577106,nssv2577088,nssv2577065,nssv2577030,nssv2577052,nssv2577025,nssv2577057,nssv2577031,nssv2577063,nssv2577092,nssv2577047,nssv2577033,nssv2577064,nssv2577034,nssv2577044,nssv2577042,nssv2577099,nssv2577091,nssv2577053,nssv2577045,nssv2577086,nssv2577029,nssv2577098,nssv2577093,nssv2577059,nssv2577101,nssv2578590,nssv2577079,nssv2577080,nssv2577072,nssv2577050,nssv2577085,nssv2577082,nssv2577043,nssv2577070 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv6n82 1 142895678 142897579 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946688,nsv946687 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946689 1 142897079 142897579 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577207,nssv2577206,nssv2577203,nssv2577201,nssv2577210,nssv2577202,nssv2577208,nssv2577212,nssv2577204,nssv2577211,nssv2577209,nssv2577205 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946690 1 142897579 142899023 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577283,nssv2577243,nssv2577222,nssv2577255,nssv2577226,nssv2577271,nssv2577287,nssv2577264,nssv2577218,nssv2577259,nssv2577284,nssv2577245,nssv2577233,nssv2577270,nssv2577291,nssv2577267,nssv2577232,nssv2577293,nssv2577228,nssv2577280,nssv2577237,nssv2577275,nssv2577289,nssv2577281,nssv2577225,nssv2577282,nssv2577214,nssv2577272,nssv2577292,nssv2577273,nssv2577216,nssv2577298,nssv2577220,nssv2577236,nssv2577286,nssv2577276,nssv2577227,nssv2577260,nssv2577302,nssv2577251,nssv2577229,nssv2577261,nssv2577295,nssv2577247,nssv2577231,nssv2577265,nssv2577300,nssv2577269,nssv2577299,nssv2577279,nssv2577215,nssv2577213,nssv2577234,nssv2577257,nssv2577296,nssv2577248,nssv2577285,nssv2577258,nssv2577224,nssv2577303,nssv2577219,nssv2577266,nssv2577217,nssv2577240,nssv2577238,nssv2577297,nssv2577235,nssv2577253,nssv2577242,nssv2577252,nssv2577221,nssv2577263,nssv2577244,nssv2577256,nssv2577230,nssv2577274,nssv2577241,nssv2577262,nssv2577290,nssv2577278,nssv2577288,nssv2577250,nssv2577223,nssv2577239,nssv2577254,nssv2577268,nssv2577301,nssv2577277,nssv2577249,nssv2577294,nssv2577304,nssv2577246 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946691 1 142899023 142899615 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577308,nssv2578882,nssv2578928,nssv2578913,nssv2578926,nssv2578916,nssv2578880,nssv2577315,nssv2578931,nssv2578891,nssv2577314,nssv2577313,nssv2578930,nssv2578919,nssv2578933,nssv2578895,nssv2578875,nssv2578899,nssv2577331,nssv2578893,nssv2577312,nssv2578900,nssv2577317,nssv2577310,nssv2577320,nssv2578903,nssv2577329,nssv2578902,nssv2578932,nssv2578921,nssv2577319,nssv2578894,nssv2577318,nssv2578911,nssv2578872,nssv2578890,nssv2578934,nssv2578886,nssv2578935,nssv2578909,nssv2577322,nssv2578905,nssv2578873,nssv2578917,nssv2578877,nssv2578914,nssv2577326,nssv2578904,nssv2577307,nssv2578923,nssv2578887,nssv2578922,nssv2578929,nssv2578901,nssv2577325,nssv2578898,nssv2577327,nssv2578915,nssv2578876,nssv2578906,nssv2578884,nssv2577306,nssv2577321,nssv2577316,nssv2578885,nssv2578879,nssv2578927,nssv2578889,nssv2577328,nssv2578892,nssv2577311,nssv2578896,nssv2577330,nssv2578883,nssv2578874,nssv2578908,nssv2578881,nssv2577305,nssv2577323,nssv2578918,nssv2578878,nssv2578897,nssv2577324,nssv2578888,nssv2578920,nssv2577309,nssv2578924,nssv2578925,nssv2578912,nssv2578907,nssv2578910 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946693 1 142899615 142900462 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578952,nssv2578997,nssv2578963,nssv2578980,nssv2578953,nssv2578994,nssv2578970,nssv2578983,nssv2578958,nssv2579003,nssv2578959,nssv2578993,nssv2578956,nssv2578999,nssv2579024,nssv2578975,nssv2578939,nssv2579001,nssv2579020,nssv2578989,nssv2578955,nssv2579002,nssv2578968,nssv2578981,nssv2578966,nssv2579007,nssv2579025,nssv2578996,nssv2578972,nssv2579011,nssv2578954,nssv2578990,nssv2579027,nssv2579016,nssv2578967,nssv2578998,nssv2578964,nssv2578986,nssv2578944,nssv2579000,nssv2578973,nssv2579017,nssv2578977,nssv2579015,nssv2578957,nssv2578974,nssv2578940,nssv2578988,nssv2578979,nssv2578947,nssv2579023,nssv2578978,nssv2579021,nssv2579004,nssv2578965,nssv2578937,nssv2578943,nssv2579006,nssv2579022,nssv2579013,nssv2578969,nssv2578942,nssv2579018,nssv2579014,nssv2578962,nssv2578984,nssv2578976,nssv2579010,nssv2578950,nssv2579008,nssv2578949,nssv2578945,nssv2579019,nssv2578971,nssv2578946,nssv2578991,nssv2578960,nssv2578992,nssv2578961,nssv2579012,nssv2578951,nssv2578938,nssv2579026,nssv2578941,nssv2579009,nssv2578985,nssv2578982,nssv2578948,nssv2579005,nssv2578995,nssv2578987 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946694 1 142900462 142901865 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579052,nssv2579096,nssv2579068,nssv2579101,nssv2579041,nssv2579090,nssv2579044,nssv2579072,nssv2579051,nssv2579084,nssv2576733,nssv2579074,nssv2579050,nssv2579099,nssv2579064,nssv2576721,nssv2579045,nssv2579066,nssv2576732,nssv2579086,nssv2579049,nssv2579097,nssv2576725,nssv2579063,nssv2579058,nssv2576717,nssv2576727,nssv2579073,nssv2576726,nssv2579098,nssv2576729,nssv2579034,nssv2579056,nssv2579082,nssv2579036,nssv2579088,nssv2579032,nssv2576716,nssv2579053,nssv2579095,nssv2576730,nssv2576722,nssv2579059,nssv2576718,nssv2576731,nssv2576723,nssv2579065,nssv2579094,nssv2579038,nssv2576720,nssv2579048,nssv2579078,nssv2579046,nssv2579076,nssv2579035,nssv2579067,nssv2579031,nssv2579033,nssv2576724,nssv2579085,nssv2579055,nssv2576719,nssv2579071,nssv2579070,nssv2579057,nssv2579075,nssv2579054,nssv2579037,nssv2579062,nssv2579079,nssv2576728,nssv2579087,nssv2579043,nssv2579089,nssv2579060,nssv2579081,nssv2579061,nssv2579083,nssv2579042,nssv2579092,nssv2579069,nssv2579040,nssv2579047,nssv2579100,nssv2579080,nssv2579077,nssv2579039,nssv2579093,nssv2579030,nssv2579029,nssv2579028,nssv2579091 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946695 1 142901865 142902365 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576816,nssv2576789,nssv2576752,nssv2576790,nssv2576754,nssv2576794,nssv2576820,nssv2576797,nssv2576819,nssv2576746,nssv2576737,nssv2576802,nssv2576822,nssv2576772,nssv2576741,nssv2576734,nssv2576749,nssv2576803,nssv2576817,nssv2576740,nssv2576757,nssv2576780,nssv2576744,nssv2576785,nssv2576747,nssv2576800,nssv2576774,nssv2576787,nssv2576775,nssv2576783,nssv2576765,nssv2576809,nssv2576755,nssv2576811,nssv2576818,nssv2576791,nssv2576762,nssv2576735,nssv2576742,nssv2576782,nssv2576764,nssv2576736,nssv2576758,nssv2576799,nssv2576823,nssv2576813,nssv2576825,nssv2576801,nssv2576763,nssv2576788,nssv2576760,nssv2576795,nssv2576759,nssv2576786,nssv2576771,nssv2576784,nssv2576821,nssv2576812,nssv2576767,nssv2576743,nssv2576751,nssv2576814,nssv2576753,nssv2576806,nssv2576766,nssv2576807,nssv2576777,nssv2576798,nssv2576750,nssv2576792,nssv2576768,nssv2576769,nssv2576738,nssv2576745,nssv2576761,nssv2576810,nssv2576770,nssv2576781,nssv2576748,nssv2576739,nssv2576824,nssv2576776,nssv2576756,nssv2576815,nssv2576808,nssv2576779,nssv2576796,nssv2576805,nssv2576778,nssv2576793,nssv2576804,nssv2576773 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946696 1 142902365 142903126 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576858,nssv2576902,nssv2576866,nssv2576886,nssv2576907,nssv2576834,nssv2576855,nssv2576890,nssv2576828,nssv2576885,nssv2576852,nssv2576887,nssv2576909,nssv2576831,nssv2576846,nssv2576875,nssv2576911,nssv2576905,nssv2576862,nssv2576906,nssv2576840,nssv2576891,nssv2576839,nssv2576884,nssv2576914,nssv2576877,nssv2576908,nssv2576860,nssv2576832,nssv2576871,nssv2576845,nssv2576836,nssv2576857,nssv2576870,nssv2576854,nssv2576876,nssv2576838,nssv2576896,nssv2576848,nssv2576869,nssv2576912,nssv2576864,nssv2576915,nssv2576880,nssv2576843,nssv2576872,nssv2576865,nssv2576899,nssv2576842,nssv2576826,nssv2576868,nssv2576895,nssv2576853,nssv2576879,nssv2576847,nssv2576827,nssv2576833,nssv2576900,nssv2576835,nssv2576903,nssv2576850,nssv2576898,nssv2576913,nssv2576874,nssv2576841,nssv2576893,nssv2576916,nssv2576830,nssv2576829,nssv2576878,nssv2576859,nssv2576867,nssv2576844,nssv2576901,nssv2576910,nssv2576881,nssv2576861,nssv2576894,nssv2576849,nssv2576882,nssv2576856,nssv2576837,nssv2576851,nssv2576904,nssv2576892,nssv2576889,nssv2576897,nssv2576883,nssv2576863,nssv2576888,nssv2576873 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946698 1 142903126 142903800 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2576930,nssv2576976,nssv2576949,nssv2577003,nssv2576928,nssv2576963,nssv2576989,nssv2576972,nssv2576943,nssv2576962,nssv2576990,nssv2576971,nssv2576925,nssv2576954,nssv2576940,nssv2576964,nssv2576993,nssv2576986,nssv2576922,nssv2576941,nssv2576936,nssv2576987,nssv2576996,nssv2576998,nssv2576997,nssv2576959,nssv2576994,nssv2576967,nssv2576942,nssv2577008,nssv2576988,nssv2576979,nssv2576931,nssv2576955,nssv2576933,nssv2576953,nssv2576991,nssv2576945,nssv2576921,nssv2576951,nssv2576926,nssv2576918,nssv2576946,nssv2576944,nssv2576927,nssv2576948,nssv2576992,nssv2576956,nssv2576924,nssv2576968,nssv2576934,nssv2576978,nssv2576939,nssv2576958,nssv2577000,nssv2576957,nssv2577007,nssv2576983,nssv2576935,nssv2576974,nssv2576947,nssv2576960,nssv2576932,nssv2576985,nssv2576929,nssv2576975,nssv2576923,nssv2576970,nssv2576920,nssv2576984,nssv2576919,nssv2576982,nssv2576995,nssv2576969,nssv2577005,nssv2576961,nssv2576938,nssv2576977,nssv2577001,nssv2576966,nssv2577004,nssv2577006,nssv2576937,nssv2576981,nssv2576950,nssv2576980,nssv2576999,nssv2576952,nssv2576965,nssv2576973,nssv2577002 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv991538 1 142903360 142908125 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3582486 M 3 0 1 LOC100288142 HuRef nsv946699 1 142903800 142905231 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577965,nssv2577966,nssv2577014,nssv2577994,nssv2577953,nssv2578001,nssv2578006,nssv2577969,nssv2578011,nssv2577996,nssv2577962,nssv2578015,nssv2578017,nssv2577956,nssv2578012,nssv2577984,nssv2578007,nssv2578014,nssv2578010,nssv2577993,nssv2577012,nssv2577980,nssv2578004,nssv2577978,nssv2577958,nssv2578013,nssv2578024,nssv2577992,nssv2577019,nssv2577998,nssv2577023,nssv2577987,nssv2578003,nssv2577971,nssv2578008,nssv2578019,nssv2577018,nssv2577995,nssv2577961,nssv2577959,nssv2577015,nssv2577976,nssv2577948,nssv2577989,nssv2578021,nssv2577963,nssv2577016,nssv2577009,nssv2577950,nssv2577968,nssv2578020,nssv2578002,nssv2577017,nssv2577990,nssv2577951,nssv2577981,nssv2578009,nssv2578000,nssv2578023,nssv2577960,nssv2577957,nssv2577988,nssv2577011,nssv2577974,nssv2578005,nssv2578022,nssv2577013,nssv2577977,nssv2577021,nssv2577982,nssv2577952,nssv2577999,nssv2577010,nssv2577975,nssv2577949,nssv2577979,nssv2577020,nssv2577991,nssv2577954,nssv2577970,nssv2577955,nssv2577985,nssv2577964,nssv2577972,nssv2578016,nssv2577973,nssv2577022,nssv2577986,nssv2577967,nssv2577983,nssv2578018,nssv2577997 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946700 1 142905231 142906644 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578047,nssv2578069,nssv2578044,nssv2578071,nssv2578098,nssv2578113,nssv2578041,nssv2578077,nssv2578031,nssv2578067,nssv2578108,nssv2578052,nssv2578032,nssv2578094,nssv2578053,nssv2578081,nssv2578045,nssv2578075,nssv2578033,nssv2578079,nssv2578102,nssv2578093,nssv2578050,nssv2578106,nssv2578042,nssv2578064,nssv2578027,nssv2578062,nssv2578112,nssv2578084,nssv2578114,nssv2578088,nssv2578026,nssv2578058,nssv2578038,nssv2578078,nssv2578111,nssv2578105,nssv2578097,nssv2578055,nssv2578029,nssv2578083,nssv2578054,nssv2578025,nssv2578099,nssv2578074,nssv2578034,nssv2578072,nssv2578039,nssv2578082,nssv2578049,nssv2578060,nssv2578057,nssv2578086,nssv2578037,nssv2578065,nssv2578028,nssv2578091,nssv2578096,nssv2578068,nssv2578043,nssv2578059,nssv2578103,nssv2578090,nssv2578095,nssv2578076,nssv2578100,nssv2578087,nssv2578036,nssv2578092,nssv2578035,nssv2578061,nssv2578101,nssv2578051,nssv2578107,nssv2578073,nssv2578040,nssv2578115,nssv2578104,nssv2578109,nssv2578046,nssv2578089,nssv2578030,nssv2578070,nssv2578056,nssv2578080,nssv2578063,nssv2578116,nssv2578048,nssv2578110,nssv2578066,nssv2578085 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946701 1 142906644 142907144 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578153,nssv2577644,nssv2578143,nssv2578128,nssv2577663,nssv2577643,nssv2578145,nssv2578151,nssv2578120,nssv2577647,nssv2578152,nssv2577655,nssv2578134,nssv2578154,nssv2578130,nssv2578162,nssv2578135,nssv2578118,nssv2577668,nssv2577645,nssv2578136,nssv2577657,nssv2578123,nssv2578174,nssv2577665,nssv2577652,nssv2578160,nssv2577672,nssv2578127,nssv2577654,nssv2577670,nssv2578125,nssv2578133,nssv2577649,nssv2578147,nssv2578169,nssv2577666,nssv2578121,nssv2578144,nssv2577661,nssv2578150,nssv2577660,nssv2578124,nssv2578175,nssv2578139,nssv2578163,nssv2578138,nssv2577642,nssv2578156,nssv2578161,nssv2578159,nssv2577641,nssv2578126,nssv2578167,nssv2577667,nssv2578122,nssv2578131,nssv2578117,nssv2578157,nssv2577646,nssv2577669,nssv2578155,nssv2578119,nssv2577656,nssv2578141,nssv2577659,nssv2578148,nssv2578173,nssv2577664,nssv2577640,nssv2578132,nssv2578168,nssv2577662,nssv2578172,nssv2578137,nssv2578171,nssv2578146,nssv2578158,nssv2578129,nssv2578165,nssv2577671,nssv2577650,nssv2578140,nssv2578166,nssv2578149,nssv2577648,nssv2578142,nssv2578170,nssv2577658,nssv2578164,nssv2577651,nssv2577653 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946702 1 142907144 142907905 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577758,nssv2577681,nssv2577762,nssv2577711,nssv2577693,nssv2577752,nssv2577676,nssv2577722,nssv2577698,nssv2577739,nssv2577756,nssv2577707,nssv2577715,nssv2577731,nssv2577705,nssv2577714,nssv2577688,nssv2577745,nssv2577682,nssv2577736,nssv2577687,nssv2577746,nssv2577686,nssv2577728,nssv2577691,nssv2577737,nssv2577692,nssv2577723,nssv2577760,nssv2577684,nssv2577708,nssv2577735,nssv2577696,nssv2577753,nssv2577704,nssv2577719,nssv2577761,nssv2577742,nssv2577695,nssv2577674,nssv2577694,nssv2577730,nssv2577685,nssv2577751,nssv2577689,nssv2577710,nssv2577757,nssv2577749,nssv2577702,nssv2577673,nssv2577675,nssv2577743,nssv2577697,nssv2577724,nssv2577763,nssv2577718,nssv2577759,nssv2577677,nssv2577679,nssv2577727,nssv2577680,nssv2577683,nssv2577755,nssv2577734,nssv2577703,nssv2577744,nssv2577713,nssv2577748,nssv2577712,nssv2577717,nssv2577701,nssv2577764,nssv2577706,nssv2577729,nssv2577699,nssv2577720,nssv2577709,nssv2577740,nssv2577700,nssv2577741,nssv2577690,nssv2577733,nssv2577716,nssv2577678,nssv2577754,nssv2577747,nssv2577721,nssv2577750,nssv2577738,nssv2577725,nssv2577726,nssv2577732 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946703 1 142907905 142908588 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577850,nssv2577766,nssv2577855,nssv2577806,nssv2577778,nssv2577829,nssv2577768,nssv2577802,nssv2577794,nssv2577824,nssv2577805,nssv2577837,nssv2577787,nssv2577811,nssv2577846,nssv2577773,nssv2577791,nssv2577832,nssv2577796,nssv2577813,nssv2577800,nssv2577830,nssv2577790,nssv2577825,nssv2577801,nssv2577839,nssv2577779,nssv2577823,nssv2577853,nssv2577820,nssv2577847,nssv2577834,nssv2577808,nssv2577835,nssv2577784,nssv2577770,nssv2577798,nssv2577856,nssv2577848,nssv2577831,nssv2577780,nssv2577765,nssv2577797,nssv2577838,nssv2577767,nssv2577799,nssv2577789,nssv2577841,nssv2577792,nssv2577810,nssv2577777,nssv2577843,nssv2577852,nssv2577817,nssv2577785,nssv2577818,nssv2577788,nssv2577816,nssv2577775,nssv2577827,nssv2577771,nssv2577833,nssv2577851,nssv2577822,nssv2577781,nssv2577842,nssv2577786,nssv2577845,nssv2577804,nssv2577819,nssv2577795,nssv2577809,nssv2577849,nssv2577836,nssv2577807,nssv2577815,nssv2577772,nssv2577769,nssv2577854,nssv2577812,nssv2577782,nssv2577776,nssv2577783,nssv2577844,nssv2577774,nssv2577840,nssv2577793,nssv2577814,nssv2577828,nssv2577821,nssv2577826,nssv2577803 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946704 1 142908588 142909305 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2577888,nssv2577907,nssv2577878,nssv2577913,nssv2577881,nssv2577912,nssv2577942,nssv2577922,nssv2577882,nssv2577858,nssv2577880,nssv2577924,nssv2577941,nssv2577862,nssv2577887,nssv2577868,nssv2577899,nssv2577930,nssv2577939,nssv2577927,nssv2577889,nssv2577911,nssv2577896,nssv2577936,nssv2577893,nssv2577916,nssv2577874,nssv2577932,nssv2577872,nssv2577923,nssv2577867,nssv2577928,nssv2577859,nssv2577910,nssv2577869,nssv2577934,nssv2577892,nssv2577926,nssv2577876,nssv2577865,nssv2577863,nssv2577903,nssv2577870,nssv2577915,nssv2577940,nssv2577935,nssv2577938,nssv2577857,nssv2577943,nssv2577931,nssv2577897,nssv2577895,nssv2577944,nssv2577920,nssv2577886,nssv2577919,nssv2577875,nssv2577908,nssv2577885,nssv2577929,nssv2577866,nssv2577917,nssv2577879,nssv2577904,nssv2577864,nssv2577918,nssv2577873,nssv2577898,nssv2577945,nssv2577909,nssv2577871,nssv2577937,nssv2577860,nssv2577891,nssv2577890,nssv2577905,nssv2577946,nssv2577933,nssv2577900,nssv2577921,nssv2577884,nssv2577861,nssv2577883,nssv2577902,nssv2577947,nssv2577914,nssv2577877,nssv2577894,nssv2577925,nssv2577906,nssv2577901 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946706 1 142909305 142910027 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578300,nssv2578335,nssv2578341,nssv2578306,nssv2578280,nssv2578323,nssv2578264,nssv2578265,nssv2578288,nssv2578307,nssv2578270,nssv2578301,nssv2578278,nssv2578303,nssv2578273,nssv2578336,nssv2578345,nssv2578317,nssv2578276,nssv2578331,nssv2578260,nssv2578330,nssv2578287,nssv2578294,nssv2578286,nssv2578258,nssv2578285,nssv2578334,nssv2578259,nssv2578311,nssv2578296,nssv2578328,nssv2578339,nssv2578320,nssv2578292,nssv2578268,nssv2578267,nssv2578314,nssv2578271,nssv2578308,nssv2578344,nssv2578315,nssv2578297,nssv2578316,nssv2578266,nssv2578305,nssv2578279,nssv2578302,nssv2578263,nssv2578312,nssv2578290,nssv2578262,nssv2578343,nssv2578298,nssv2578283,nssv2578309,nssv2578289,nssv2578333,nssv2578277,nssv2578295,nssv2578284,nssv2578329,nssv2578347,nssv2578321,nssv2578281,nssv2578261,nssv2578274,nssv2578291,nssv2578342,nssv2578310,nssv2578346,nssv2578304,nssv2578340,nssv2578257,nssv2578299,nssv2578319,nssv2578269,nssv2578327,nssv2578293,nssv2578337,nssv2578275,nssv2578322,nssv2578282,nssv2578318,nssv2578338,nssv2578313,nssv2578272,nssv2578326,nssv2578324,nssv2578325,nssv2578332 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946707 1 142910027 142911440 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578392,nssv2578403,nssv2578364,nssv2578387,nssv2578373,nssv2578353,nssv2578438,nssv2578402,nssv2578439,nssv2578406,nssv2578433,nssv2578425,nssv2578382,nssv2578399,nssv2578372,nssv2578420,nssv2578371,nssv2578395,nssv2578437,nssv2578409,nssv2578377,nssv2578383,nssv2578388,nssv2578356,nssv2578378,nssv2578401,nssv2578351,nssv2578423,nssv2578436,nssv2578426,nssv2578370,nssv2578419,nssv2578430,nssv2578415,nssv2578381,nssv2578408,nssv2578384,nssv2578411,nssv2578365,nssv2578416,nssv2578379,nssv2578414,nssv2578355,nssv2578349,nssv2578362,nssv2578407,nssv2578363,nssv2578410,nssv2578368,nssv2578359,nssv2578389,nssv2578405,nssv2578357,nssv2578429,nssv2578380,nssv2578418,nssv2578385,nssv2578398,nssv2578354,nssv2578417,nssv2578367,nssv2578427,nssv2578375,nssv2578394,nssv2578432,nssv2578396,nssv2578374,nssv2578412,nssv2578350,nssv2578393,nssv2578366,nssv2578424,nssv2578376,nssv2578360,nssv2578369,nssv2578348,nssv2578431,nssv2578400,nssv2578391,nssv2578386,nssv2578435,nssv2578428,nssv2578434,nssv2578404,nssv2578361,nssv2578413,nssv2578390,nssv2578352,nssv2578358,nssv2578422,nssv2578397,nssv2578421 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946708 1 142911440 142911940 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578597,nssv2578617,nssv2578459,nssv2578621,nssv2578477,nssv2578442,nssv2578636,nssv2578479,nssv2578639,nssv2578614,nssv2578450,nssv2578475,nssv2578467,nssv2578627,nssv2578640,nssv2578482,nssv2578474,nssv2578478,nssv2578456,nssv2578601,nssv2578466,nssv2578629,nssv2578480,nssv2578611,nssv2578444,nssv2578441,nssv2578472,nssv2578619,nssv2578455,nssv2578609,nssv2578481,nssv2578449,nssv2578469,nssv2578610,nssv2578463,nssv2578623,nssv2578470,nssv2578600,nssv2578460,nssv2578452,nssv2578448,nssv2578608,nssv2578454,nssv2578620,nssv2578638,nssv2578613,nssv2578637,nssv2578624,nssv2578642,nssv2578446,nssv2578458,nssv2578628,nssv2578641,nssv2578622,nssv2578644,nssv2578625,nssv2578465,nssv2578626,nssv2578471,nssv2578440,nssv2578476,nssv2578599,nssv2578643,nssv2578632,nssv2578447,nssv2578607,nssv2578464,nssv2578602,nssv2578443,nssv2578616,nssv2578483,nssv2578604,nssv2578461,nssv2578634,nssv2578473,nssv2578598,nssv2578457,nssv2578631,nssv2578468,nssv2578606,nssv2578635,nssv2578605,nssv2578462,nssv2578630,nssv2578453,nssv2578612,nssv2578618,nssv2578445,nssv2578603,nssv2578451,nssv2578615,nssv2578633 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946709 1 142911940 142912701 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578678,nssv2578687,nssv2578736,nssv2578715,nssv2578659,nssv2578699,nssv2578655,nssv2578702,nssv2578717,nssv2578706,nssv2578661,nssv2578683,nssv2578657,nssv2578694,nssv2578670,nssv2578713,nssv2578658,nssv2578712,nssv2578666,nssv2578708,nssv2578729,nssv2578705,nssv2578651,nssv2578685,nssv2578728,nssv2578682,nssv2578675,nssv2578680,nssv2578723,nssv2578695,nssv2578667,nssv2578676,nssv2578677,nssv2578727,nssv2578654,nssv2578704,nssv2578649,nssv2578679,nssv2578664,nssv2578686,nssv2578724,nssv2578710,nssv2578668,nssv2578714,nssv2578652,nssv2578709,nssv2578722,nssv2578698,nssv2578732,nssv2578672,nssv2578650,nssv2578684,nssv2578653,nssv2578690,nssv2578721,nssv2578696,nssv2578720,nssv2578703,nssv2578719,nssv2578646,nssv2578648,nssv2578691,nssv2578647,nssv2578693,nssv2578663,nssv2578726,nssv2578656,nssv2578681,nssv2578725,nssv2578688,nssv2578718,nssv2578707,nssv2578733,nssv2578700,nssv2578662,nssv2578731,nssv2578716,nssv2578692,nssv2578660,nssv2578669,nssv2578674,nssv2578645,nssv2578671,nssv2578697,nssv2578665,nssv2578673,nssv2578735,nssv2578711,nssv2578730,nssv2578701,nssv2578734,nssv2578689 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946710 1 142912701 142913427 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578769,nssv2578779,nssv2578828,nssv2578771,nssv2578740,nssv2578795,nssv2578747,nssv2578783,nssv2578744,nssv2578763,nssv2578758,nssv2578822,nssv2578827,nssv2578767,nssv2578765,nssv2578772,nssv2578750,nssv2578737,nssv2578748,nssv2578788,nssv2578749,nssv2578777,nssv2578820,nssv2578797,nssv2578808,nssv2578802,nssv2578761,nssv2578798,nssv2578812,nssv2578792,nssv2578745,nssv2578782,nssv2578753,nssv2578780,nssv2578821,nssv2578800,nssv2578825,nssv2578786,nssv2578738,nssv2578804,nssv2578741,nssv2578781,nssv2578813,nssv2578789,nssv2578824,nssv2578776,nssv2578762,nssv2578803,nssv2578743,nssv2578794,nssv2578742,nssv2578778,nssv2578811,nssv2578791,nssv2578755,nssv2578823,nssv2578752,nssv2578770,nssv2578759,nssv2578796,nssv2578816,nssv2578784,nssv2578807,nssv2578793,nssv2578814,nssv2578826,nssv2578809,nssv2578774,nssv2578751,nssv2578817,nssv2578810,nssv2578806,nssv2578739,nssv2578773,nssv2578756,nssv2578785,nssv2578757,nssv2578787,nssv2578754,nssv2578819,nssv2578768,nssv2578775,nssv2578815,nssv2578805,nssv2578746,nssv2578799,nssv2578766,nssv2578760,nssv2578818,nssv2578790,nssv2578801,nssv2578764 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3426344 1 142912852 142919750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691873 M 185 1 0 LOC100288142 NA19239 nsv946711 1 142913427 142914177 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578861,nssv2579803,nssv2578836,nssv2579813,nssv2579831,nssv2578829,nssv2578854,nssv2579809,nssv2578853,nssv2579799,nssv2578840,nssv2578868,nssv2578841,nssv2579804,nssv2578844,nssv2579842,nssv2578845,nssv2579798,nssv2579827,nssv2579819,nssv2578834,nssv2578852,nssv2579843,nssv2578862,nssv2578842,nssv2578866,nssv2578846,nssv2578867,nssv2579826,nssv2579807,nssv2578835,nssv2579838,nssv2579841,nssv2579806,nssv2578850,nssv2579805,nssv2579837,nssv2578870,nssv2578860,nssv2579821,nssv2578849,nssv2579833,nssv2579832,nssv2578859,nssv2578857,nssv2578871,nssv2579825,nssv2579816,nssv2578847,nssv2579811,nssv2578837,nssv2579834,nssv2578848,nssv2578869,nssv2578858,nssv2579802,nssv2578833,nssv2578856,nssv2579840,nssv2579818,nssv2579828,nssv2579839,nssv2578832,nssv2579796,nssv2578851,nssv2578855,nssv2578831,nssv2579808,nssv2579829,nssv2579817,nssv2579830,nssv2578863,nssv2578843,nssv2579814,nssv2578839,nssv2579835,nssv2579836,nssv2579801,nssv2579823,nssv2579810,nssv2578830,nssv2579797,nssv2578838,nssv2579820,nssv2579824,nssv2579815,nssv2579812,nssv2579844,nssv2579822,nssv2578865,nssv2579800,nssv2578864 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946712 1 142914177 142914848 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579847,nssv2579925,nssv2579922,nssv2579936,nssv2579853,nssv2579909,nssv2579874,nssv2579930,nssv2579923,nssv2579875,nssv2579858,nssv2579895,nssv2579854,nssv2579904,nssv2579856,nssv2579884,nssv2579924,nssv2579899,nssv2579862,nssv2579879,nssv2579921,nssv2579883,nssv2579846,nssv2579881,nssv2579857,nssv2579891,nssv2579915,nssv2579908,nssv2579865,nssv2579878,nssv2579919,nssv2579892,nssv2579917,nssv2579887,nssv2579916,nssv2579890,nssv2579852,nssv2579893,nssv2579850,nssv2579845,nssv2579918,nssv2579934,nssv2579869,nssv2579926,nssv2579867,nssv2579907,nssv2579928,nssv2579914,nssv2579848,nssv2579902,nssv2579866,nssv2579886,nssv2579859,nssv2579898,nssv2579932,nssv2579872,nssv2579864,nssv2579889,nssv2579860,nssv2579897,nssv2579861,nssv2579882,nssv2579849,nssv2579901,nssv2579933,nssv2579900,nssv2579935,nssv2579871,nssv2579870,nssv2579911,nssv2579873,nssv2579910,nssv2579929,nssv2579913,nssv2579920,nssv2579885,nssv2579876,nssv2579894,nssv2579851,nssv2579906,nssv2579855,nssv2579912,nssv2579863,nssv2579903,nssv2579931,nssv2579888,nssv2579868,nssv2579896,nssv2579905,nssv2579927,nssv2579877,nssv2579880 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946713 1 142914848 142915348 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579943,nssv2580002,nssv2580016,nssv2580022,nssv2579952,nssv2580017,nssv2579938,nssv2579974,nssv2579968,nssv2579996,nssv2580013,nssv2579981,nssv2580011,nssv2580026,nssv2579954,nssv2579982,nssv2580020,nssv2580028,nssv2580012,nssv2579985,nssv2580007,nssv2579975,nssv2579941,nssv2579997,nssv2579945,nssv2579963,nssv2579962,nssv2579979,nssv2579949,nssv2579960,nssv2580024,nssv2579973,nssv2580015,nssv2579969,nssv2579948,nssv2579937,nssv2579958,nssv2579989,nssv2579944,nssv2580006,nssv2579947,nssv2579998,nssv2580008,nssv2580001,nssv2580021,nssv2579992,nssv2579939,nssv2579984,nssv2580010,nssv2579993,nssv2580025,nssv2580004,nssv2579946,nssv2580003,nssv2579951,nssv2580018,nssv2579956,nssv2579978,nssv2579957,nssv2579999,nssv2580027,nssv2579991,nssv2579955,nssv2579970,nssv2579959,nssv2579980,nssv2579966,nssv2579987,nssv2579953,nssv2579988,nssv2579940,nssv2579976,nssv2579950,nssv2579971,nssv2579942,nssv2579990,nssv2579965,nssv2579995,nssv2579961,nssv2580019,nssv2580009,nssv2579964,nssv2580014,nssv2579983,nssv2580023,nssv2580005,nssv2579967,nssv2579972,nssv2580000,nssv2579977,nssv2579994,nssv2579986 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv7n82 1 142915348 142917489 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946715,nsv946714 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946716 1 142916878 142917489 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579178,nssv2580123,nssv2580114,nssv2580150,nssv2579173,nssv2580160,nssv2580174,nssv2580151,nssv2580117,nssv2580131,nssv2580109,nssv2580163,nssv2580167,nssv2580148,nssv2580111,nssv2580149,nssv2580108,nssv2580162,nssv2580105,nssv2580132,nssv2579176,nssv2580164,nssv2580113,nssv2580147,nssv2580173,nssv2580141,nssv2580118,nssv2580157,nssv2580170,nssv2580133,nssv2580112,nssv2579172,nssv2580120,nssv2580156,nssv2580172,nssv2580130,nssv2579179,nssv2580129,nssv2580106,nssv2580137,nssv2580124,nssv2580154,nssv2579177,nssv2580126,nssv2580166,nssv2580153,nssv2580104,nssv2579171,nssv2580169,nssv2580134,nssv2579175,nssv2580142,nssv2580127,nssv2580158,nssv2580171,nssv2580138,nssv2580175,nssv2580143,nssv2580115,nssv2580128,nssv2580121,nssv2580122,nssv2579174,nssv2580146,nssv2580110,nssv2580161,nssv2580125,nssv2580165,nssv2580107,nssv2580140,nssv2580116,nssv2580139,nssv2580168,nssv2580135,nssv2580119,nssv2580145,nssv2580152,nssv2580144,nssv2580136,nssv2580155,nssv2580159 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946717 1 142917489 142918975 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2580202,nssv2580241,nssv2580195,nssv2580219,nssv2580206,nssv2580242,nssv2580205,nssv2580246,nssv2580203,nssv2580221,nssv2580201,nssv2580180,nssv2580208,nssv2580239,nssv2580265,nssv2580222,nssv2580216,nssv2580244,nssv2580259,nssv2580186,nssv2580200,nssv2580230,nssv2580197,nssv2580248,nssv2580266,nssv2580226,nssv2580199,nssv2580243,nssv2580261,nssv2580247,nssv2580191,nssv2580228,nssv2580204,nssv2580255,nssv2580194,nssv2580220,nssv2580185,nssv2580245,nssv2580192,nssv2580231,nssv2580258,nssv2580184,nssv2580183,nssv2580229,nssv2580182,nssv2580233,nssv2580209,nssv2580227,nssv2580196,nssv2580223,nssv2580264,nssv2580213,nssv2580257,nssv2580235,nssv2580189,nssv2580237,nssv2580260,nssv2580254,nssv2580212,nssv2580252,nssv2580179,nssv2580267,nssv2580218,nssv2580253,nssv2580188,nssv2580217,nssv2580198,nssv2580249,nssv2580193,nssv2580256,nssv2580178,nssv2580225,nssv2580190,nssv2580214,nssv2580211,nssv2580250,nssv2580263,nssv2580176,nssv2580262,nssv2580177,nssv2580215,nssv2580240,nssv2580207,nssv2580238,nssv2580251,nssv2580187,nssv2580236,nssv2580232,nssv2580234,nssv2580181,nssv2580210,nssv2580224 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946718 1 142918975 142919634 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2580308,nssv2580316,nssv2580307,nssv2580348,nssv2580349,nssv2580329,nssv2580291,nssv2580317,nssv2580289,nssv2580342,nssv2580292,nssv2580318,nssv2580297,nssv2580328,nssv2580281,nssv2580320,nssv2580304,nssv2580343,nssv2580356,nssv2580345,nssv2580296,nssv2580319,nssv2580290,nssv2580309,nssv2580293,nssv2580278,nssv2580299,nssv2580272,nssv2580277,nssv2580305,nssv2580286,nssv2580346,nssv2580287,nssv2580344,nssv2580271,nssv2580276,nssv2580294,nssv2580321,nssv2580301,nssv2580315,nssv2580350,nssv2580324,nssv2580275,nssv2580333,nssv2580280,nssv2580341,nssv2580285,nssv2580338,nssv2580274,nssv2580337,nssv2580300,nssv2580331,nssv2580288,nssv2580334,nssv2580283,nssv2580268,nssv2580284,nssv2580335,nssv2580303,nssv2580336,nssv2580295,nssv2580359,nssv2580357,nssv2580332,nssv2580355,nssv2580269,nssv2580354,nssv2580314,nssv2580298,nssv2580339,nssv2580353,nssv2580340,nssv2580352,nssv2580330,nssv2580310,nssv2580322,nssv2580270,nssv2580323,nssv2580358,nssv2580302,nssv2580351,nssv2580311,nssv2580282,nssv2580347,nssv2580273,nssv2580325,nssv2580312,nssv2580306,nssv2580327,nssv2580313,nssv2580326,nssv2580279 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946719 1 142919634 142921121 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581985,nssv2581973,nssv2580402,nssv2581974,nssv2581988,nssv2581975,nssv2581983,nssv2580394,nssv2580387,nssv2580397,nssv2580391,nssv2580411,nssv2580373,nssv2581967,nssv2580392,nssv2580371,nssv2580396,nssv2581959,nssv2581989,nssv2580410,nssv2580386,nssv2581971,nssv2581982,nssv2581956,nssv2580369,nssv2581968,nssv2580388,nssv2580360,nssv2580395,nssv2580405,nssv2580379,nssv2580408,nssv2581990,nssv2580403,nssv2580380,nssv2580364,nssv2580374,nssv2580407,nssv2580372,nssv2580409,nssv2581987,nssv2581978,nssv2580377,nssv2581953,nssv2580399,nssv2580368,nssv2580362,nssv2581976,nssv2580382,nssv2580370,nssv2580378,nssv2581966,nssv2580384,nssv2581955,nssv2580389,nssv2581991,nssv2580383,nssv2581979,nssv2580366,nssv2581954,nssv2581984,nssv2580401,nssv2580376,nssv2581957,nssv2580363,nssv2581965,nssv2580367,nssv2580398,nssv2580390,nssv2580406,nssv2580393,nssv2581958,nssv2580381,nssv2580404,nssv2580400,nssv2581963,nssv2580375,nssv2581980,nssv2581981,nssv2581962,nssv2581986,nssv2581970,nssv2580385,nssv2580365,nssv2581964,nssv2581969,nssv2581977,nssv2581961,nssv2581952,nssv2580361,nssv2581972,nssv2581960 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3350597 1 142920752 142922950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691874 M 185 1 0 LOC100288142 NA19239 nsv946720 1 142921121 142922532 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582071,nssv2582037,nssv2582067,nssv2582039,nssv2582000,nssv2582046,nssv2582017,nssv2582054,nssv2582006,nssv2582032,nssv2582062,nssv2582080,nssv2582012,nssv2582082,nssv2582023,nssv2582034,nssv2582007,nssv2582035,nssv2582069,nssv2582052,nssv2581995,nssv2582038,nssv2582011,nssv2582057,nssv2582005,nssv2582033,nssv2582074,nssv2582028,nssv2581996,nssv2582026,nssv2582066,nssv2582050,nssv2582070,nssv2582042,nssv2582009,nssv2582018,nssv2581993,nssv2582049,nssv2581998,nssv2582043,nssv2582003,nssv2582045,nssv2582002,nssv2582072,nssv2582075,nssv2582030,nssv2582063,nssv2582059,nssv2582020,nssv2582041,nssv2582024,nssv2582061,nssv2582004,nssv2582025,nssv2582016,nssv2582083,nssv2582021,nssv2581992,nssv2582064,nssv2582044,nssv2581994,nssv2582053,nssv2582010,nssv2582076,nssv2582068,nssv2582015,nssv2582013,nssv2582029,nssv2582065,nssv2582060,nssv2582078,nssv2582022,nssv2581997,nssv2582040,nssv2582079,nssv2582058,nssv2582014,nssv2582036,nssv2582081,nssv2582051,nssv2581999,nssv2582055,nssv2582001,nssv2582077,nssv2582008,nssv2582056,nssv2582027,nssv2582073,nssv2582019,nssv2582048,nssv2582047,nssv2582031 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946721 1 142922532 142923032 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582093,nssv2578212,nssv2582097,nssv2578208,nssv2578190,nssv2578219,nssv2578247,nssv2578226,nssv2582094,nssv2578217,nssv2578203,nssv2578227,nssv2578182,nssv2582089,nssv2578188,nssv2578224,nssv2578241,nssv2578237,nssv2578246,nssv2578205,nssv2578200,nssv2578236,nssv2578180,nssv2578215,nssv2578249,nssv2578204,nssv2578177,nssv2578234,nssv2578250,nssv2578221,nssv2578187,nssv2582085,nssv2578191,nssv2578222,nssv2578178,nssv2578214,nssv2578196,nssv2578201,nssv2578181,nssv2578206,nssv2578184,nssv2578194,nssv2582100,nssv2582092,nssv2582098,nssv2578218,nssv2578243,nssv2582095,nssv2582099,nssv2578209,nssv2578242,nssv2582084,nssv2578202,nssv2578239,nssv2578193,nssv2578220,nssv2578185,nssv2578198,nssv2578244,nssv2578240,nssv2578245,nssv2578223,nssv2582087,nssv2578228,nssv2578195,nssv2578235,nssv2578179,nssv2578211,nssv2582090,nssv2582088,nssv2578248,nssv2578216,nssv2578183,nssv2578233,nssv2578186,nssv2578230,nssv2578192,nssv2578207,nssv2582091,nssv2578232,nssv2578176,nssv2578225,nssv2578199,nssv2578229,nssv2578189,nssv2578197,nssv2582086,nssv2578213,nssv2578231,nssv2582096,nssv2578238,nssv2578210 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946722 1 142923032 142923793 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579199,nssv2579224,nssv2579265,nssv2579185,nssv2579206,nssv2579187,nssv2579189,nssv2579248,nssv2579257,nssv2579219,nssv2579196,nssv2579254,nssv2579264,nssv2579231,nssv2579197,nssv2579237,nssv2579191,nssv2579249,nssv2579201,nssv2579180,nssv2579193,nssv2579221,nssv2579258,nssv2579255,nssv2579216,nssv2579227,nssv2579198,nssv2579228,nssv2579266,nssv2579186,nssv2579208,nssv2579253,nssv2579195,nssv2579245,nssv2579202,nssv2579244,nssv2578253,nssv2579247,nssv2579215,nssv2579236,nssv2579209,nssv2579217,nssv2579211,nssv2578252,nssv2579182,nssv2579235,nssv2579263,nssv2579238,nssv2579181,nssv2579234,nssv2579192,nssv2578251,nssv2579203,nssv2579256,nssv2579261,nssv2579225,nssv2579184,nssv2579243,nssv2578254,nssv2579250,nssv2579207,nssv2579214,nssv2579259,nssv2579220,nssv2579218,nssv2579229,nssv2579188,nssv2579222,nssv2579262,nssv2579240,nssv2579200,nssv2579183,nssv2579260,nssv2578255,nssv2579205,nssv2579242,nssv2579194,nssv2579233,nssv2579204,nssv2579226,nssv2579190,nssv2579210,nssv2579212,nssv2579230,nssv2579239,nssv2579232,nssv2579223,nssv2579251,nssv2579252,nssv2579241,nssv2579213,nssv2579246 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946723 1 142923793 142925269 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579357,nssv2579334,nssv2579287,nssv2579321,nssv2579288,nssv2579311,nssv2579297,nssv2579317,nssv2579341,nssv2579314,nssv2579342,nssv2579332,nssv2579272,nssv2579267,nssv2579275,nssv2579313,nssv2579284,nssv2579301,nssv2579274,nssv2579324,nssv2579281,nssv2579325,nssv2579339,nssv2579305,nssv2579351,nssv2579331,nssv2579270,nssv2579291,nssv2579347,nssv2579328,nssv2579296,nssv2579309,nssv2579285,nssv2579327,nssv2579292,nssv2579294,nssv2579282,nssv2579336,nssv2579278,nssv2579318,nssv2579271,nssv2579349,nssv2579350,nssv2579330,nssv2579354,nssv2579323,nssv2579344,nssv2579303,nssv2579279,nssv2579302,nssv2579345,nssv2579335,nssv2579280,nssv2579310,nssv2579276,nssv2579298,nssv2579293,nssv2579353,nssv2579338,nssv2579348,nssv2579355,nssv2579268,nssv2579299,nssv2579315,nssv2579283,nssv2579320,nssv2579273,nssv2579319,nssv2579269,nssv2579337,nssv2579289,nssv2579352,nssv2579286,nssv2579307,nssv2579340,nssv2579316,nssv2579277,nssv2579329,nssv2579290,nssv2579312,nssv2579343,nssv2579358,nssv2579346,nssv2579356,nssv2579308,nssv2579304,nssv2579306,nssv2579322,nssv2579300,nssv2579295,nssv2579333,nssv2579326 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv189e59 1 142923952 142926550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3416341,esv3405954 M 185 2 0 LOC100288142 NA19239,NA19240 nsv946724 1 142925269 142925928 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579449,nssv2579440,nssv2579384,nssv2579427,nssv2579435,nssv2579408,nssv2579372,nssv2579400,nssv2579373,nssv2579417,nssv2579367,nssv2579404,nssv2579433,nssv2579413,nssv2579442,nssv2579414,nssv2579378,nssv2579450,nssv2579436,nssv2579412,nssv2579448,nssv2579439,nssv2579374,nssv2579425,nssv2579438,nssv2579395,nssv2579369,nssv2579426,nssv2579388,nssv2579401,nssv2579360,nssv2579389,nssv2579377,nssv2579391,nssv2579379,nssv2579402,nssv2579431,nssv2579394,nssv2579371,nssv2579385,nssv2579381,nssv2579409,nssv2579430,nssv2579386,nssv2579446,nssv2579406,nssv2579375,nssv2579393,nssv2579361,nssv2579416,nssv2579368,nssv2579444,nssv2579365,nssv2579382,nssv2579366,nssv2579397,nssv2579437,nssv2579420,nssv2579363,nssv2579392,nssv2579383,nssv2579424,nssv2579434,nssv2579359,nssv2579380,nssv2579407,nssv2579429,nssv2579396,nssv2579441,nssv2579415,nssv2579387,nssv2579423,nssv2579370,nssv2579411,nssv2579445,nssv2579418,nssv2579432,nssv2579398,nssv2579376,nssv2579443,nssv2579364,nssv2579419,nssv2579390,nssv2579428,nssv2579362,nssv2579403,nssv2579405,nssv2579410,nssv2579447,nssv2579421,nssv2579399,nssv2579422 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946725 1 142925928 142927317 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579454,nssv2579487,nssv2580447,nssv2580413,nssv2579456,nssv2580465,nssv2579467,nssv2580419,nssv2579453,nssv2580442,nssv2580453,nssv2580421,nssv2579452,nssv2580434,nssv2580446,nssv2580420,nssv2579457,nssv2580456,nssv2579458,nssv2580443,nssv2580449,nssv2580425,nssv2579459,nssv2580418,nssv2579465,nssv2579481,nssv2580454,nssv2580436,nssv2579470,nssv2580415,nssv2580451,nssv2580414,nssv2580450,nssv2580444,nssv2580457,nssv2580423,nssv2579462,nssv2580459,nssv2580462,nssv2579451,nssv2579466,nssv2580435,nssv2580445,nssv2579483,nssv2579464,nssv2580430,nssv2579472,nssv2580422,nssv2579469,nssv2580427,nssv2580464,nssv2579485,nssv2579479,nssv2579478,nssv2579455,nssv2580426,nssv2579476,nssv2580455,nssv2580452,nssv2580463,nssv2580461,nssv2580440,nssv2579460,nssv2580460,nssv2579463,nssv2579486,nssv2579475,nssv2580438,nssv2579468,nssv2580412,nssv2579461,nssv2580439,nssv2580458,nssv2579484,nssv2579471,nssv2580433,nssv2579480,nssv2580437,nssv2579473,nssv2580424,nssv2580448,nssv2580417,nssv2579482,nssv2580466,nssv2580432,nssv2580431,nssv2580428,nssv2580416,nssv2580441,nssv2579474,nssv2580429,nssv2579477 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv190e59 1 142927152 142935850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3415288,esv3380056 M 185 2 0 LOC100288142 NA19239,NA19240 nsv946726 1 142927317 142928665 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2580487,nssv2580530,nssv2580541,nssv2580506,nssv2580480,nssv2580536,nssv2580537,nssv2580528,nssv2580483,nssv2580547,nssv2580472,nssv2580516,nssv2580469,nssv2580517,nssv2580496,nssv2580532,nssv2580478,nssv2580529,nssv2580489,nssv2580512,nssv2580474,nssv2580504,nssv2580475,nssv2580505,nssv2580540,nssv2580507,nssv2580546,nssv2580501,nssv2580539,nssv2580521,nssv2580477,nssv2580525,nssv2580481,nssv2580553,nssv2580491,nssv2580552,nssv2580545,nssv2580526,nssv2580470,nssv2580523,nssv2580543,nssv2580502,nssv2580484,nssv2580494,nssv2578484,nssv2580510,nssv2580538,nssv2580520,nssv2580498,nssv2580534,nssv2580492,nssv2580524,nssv2580555,nssv2580509,nssv2580476,nssv2580519,nssv2580479,nssv2580467,nssv2580554,nssv2580490,nssv2580468,nssv2580533,nssv2580488,nssv2580513,nssv2580544,nssv2580500,nssv2580482,nssv2580556,nssv2580473,nssv2580531,nssv2580495,nssv2580527,nssv2580486,nssv2580497,nssv2580550,nssv2580499,nssv2580542,nssv2580535,nssv2580485,nssv2580511,nssv2580551,nssv2580514,nssv2580471,nssv2580508,nssv2580503,nssv2580515,nssv2580548,nssv2580549,nssv2580522,nssv2580518,nssv2578485,nssv2580493 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946727 1 142928665 142929324 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2578519,nssv2578523,nssv2578489,nssv2578550,nssv2579494,nssv2578546,nssv2579497,nssv2578528,nssv2579490,nssv2578548,nssv2578508,nssv2579491,nssv2578502,nssv2578487,nssv2578516,nssv2578545,nssv2579500,nssv2578526,nssv2578492,nssv2578486,nssv2578494,nssv2578542,nssv2578558,nssv2578544,nssv2578491,nssv2578552,nssv2578561,nssv2578534,nssv2578509,nssv2578521,nssv2578515,nssv2578510,nssv2579488,nssv2578536,nssv2578498,nssv2578517,nssv2578560,nssv2578547,nssv2578504,nssv2578549,nssv2578505,nssv2578540,nssv2578501,nssv2578527,nssv2578507,nssv2578529,nssv2578563,nssv2578525,nssv2578490,nssv2578533,nssv2579489,nssv2579495,nssv2579498,nssv2578543,nssv2578506,nssv2578541,nssv2578559,nssv2578535,nssv2578562,nssv2578539,nssv2578499,nssv2578538,nssv2578495,nssv2578524,nssv2578500,nssv2578531,nssv2578488,nssv2579496,nssv2578511,nssv2578553,nssv2578497,nssv2578532,nssv2578512,nssv2578514,nssv2578557,nssv2578537,nssv2578493,nssv2578551,nssv2578496,nssv2578555,nssv2578518,nssv2579501,nssv2579493,nssv2578530,nssv2578503,nssv2578554,nssv2578520,nssv2578513,nssv2578556,nssv2579499,nssv2578522,nssv2579492 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946728 1 142929324 142930085 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579523,nssv2579571,nssv2579580,nssv2579537,nssv2579515,nssv2579539,nssv2579531,nssv2579569,nssv2579576,nssv2579566,nssv2579508,nssv2579587,nssv2579525,nssv2579593,nssv2579532,nssv2579536,nssv2579524,nssv2579502,nssv2579578,nssv2579565,nssv2579590,nssv2579556,nssv2579520,nssv2579543,nssv2579582,nssv2579541,nssv2579522,nssv2579559,nssv2579589,nssv2579540,nssv2579521,nssv2579562,nssv2579514,nssv2579545,nssv2579519,nssv2579547,nssv2579573,nssv2579560,nssv2579509,nssv2579564,nssv2579512,nssv2579542,nssv2579581,nssv2579554,nssv2579518,nssv2579533,nssv2579592,nssv2579538,nssv2579575,nssv2579544,nssv2579513,nssv2579557,nssv2579528,nssv2579558,nssv2579586,nssv2579563,nssv2579505,nssv2579570,nssv2579577,nssv2579553,nssv2579517,nssv2579529,nssv2579534,nssv2579561,nssv2579507,nssv2579568,nssv2579511,nssv2579526,nssv2579516,nssv2579591,nssv2579506,nssv2579503,nssv2579574,nssv2579535,nssv2579510,nssv2579584,nssv2579579,nssv2579555,nssv2579527,nssv2579548,nssv2579585,nssv2579588,nssv2579504,nssv2579550,nssv2579572,nssv2579552,nssv2579583,nssv2579549,nssv2579530,nssv2579567,nssv2579546,nssv2579551 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946729 1 142930085 142930759 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579614,nssv2579656,nssv2579611,nssv2579659,nssv2579683,nssv2579657,nssv2579616,nssv2579624,nssv2579607,nssv2579633,nssv2579666,nssv2579649,nssv2579596,nssv2579685,nssv2579671,nssv2579654,nssv2579599,nssv2579629,nssv2579670,nssv2579626,nssv2579667,nssv2579684,nssv2579623,nssv2579637,nssv2579608,nssv2579652,nssv2579664,nssv2579641,nssv2579622,nssv2579638,nssv2579619,nssv2579635,nssv2579668,nssv2579651,nssv2579669,nssv2579648,nssv2579604,nssv2579662,nssv2579612,nssv2579634,nssv2579597,nssv2579674,nssv2579610,nssv2579644,nssv2579613,nssv2579631,nssv2579681,nssv2579627,nssv2579677,nssv2579630,nssv2579602,nssv2579653,nssv2579609,nssv2579621,nssv2579680,nssv2579632,nssv2579676,nssv2579678,nssv2579603,nssv2579661,nssv2579605,nssv2579660,nssv2579606,nssv2579640,nssv2579600,nssv2579639,nssv2579601,nssv2579675,nssv2579618,nssv2579679,nssv2579598,nssv2579628,nssv2579673,nssv2579642,nssv2579595,nssv2579646,nssv2579665,nssv2579658,nssv2579672,nssv2579663,nssv2579615,nssv2579594,nssv2579625,nssv2579650,nssv2579617,nssv2579643,nssv2579636,nssv2579647,nssv2579645,nssv2579655,nssv2579620,nssv2579682 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946730 1 142930759 142931351 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579689,nssv2579697,nssv2579688,nssv2579698,nssv2579727,nssv2579734,nssv2579714,nssv2579730,nssv2579777,nssv2579690,nssv2579715,nssv2579735,nssv2579710,nssv2579694,nssv2579729,nssv2579696,nssv2579709,nssv2579741,nssv2579699,nssv2579765,nssv2579768,nssv2579758,nssv2579720,nssv2579751,nssv2579703,nssv2579760,nssv2579717,nssv2579724,nssv2579704,nssv2579752,nssv2579718,nssv2579761,nssv2579774,nssv2579747,nssv2579712,nssv2579764,nssv2579693,nssv2579721,nssv2579771,nssv2579756,nssv2579700,nssv2579731,nssv2579705,nssv2579744,nssv2579722,nssv2579767,nssv2579713,nssv2579739,nssv2579726,nssv2579757,nssv2579776,nssv2579738,nssv2579723,nssv2579728,nssv2579773,nssv2579742,nssv2579775,nssv2579732,nssv2579719,nssv2579762,nssv2579692,nssv2579725,nssv2579716,nssv2579743,nssv2579711,nssv2579748,nssv2579701,nssv2579766,nssv2579708,nssv2579686,nssv2579695,nssv2579740,nssv2579770,nssv2579691,nssv2579772,nssv2579763,nssv2579702,nssv2579687,nssv2579707,nssv2579733,nssv2579706,nssv2579746,nssv2579769,nssv2579736,nssv2579750,nssv2579754,nssv2579737,nssv2579753,nssv2579755,nssv2579759,nssv2579749,nssv2579745 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946731 1 142931351 142932197 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2579780,nssv2580744,nssv2580745,nssv2580754,nssv2580722,nssv2580760,nssv2579787,nssv2580761,nssv2579794,nssv2580755,nssv2580742,nssv2580773,nssv2580736,nssv2579778,nssv2580743,nssv2579788,nssv2579793,nssv2580765,nssv2580732,nssv2580764,nssv2580727,nssv2579782,nssv2579795,nssv2580783,nssv2580725,nssv2580772,nssv2580789,nssv2580771,nssv2580735,nssv2580768,nssv2580723,nssv2580756,nssv2580730,nssv2579789,nssv2580793,nssv2580770,nssv2580788,nssv2580782,nssv2580720,nssv2579783,nssv2579792,nssv2580740,nssv2579791,nssv2579779,nssv2580785,nssv2580766,nssv2580728,nssv2580780,nssv2580731,nssv2580737,nssv2579785,nssv2580767,nssv2580791,nssv2580752,nssv2579781,nssv2580776,nssv2580738,nssv2580747,nssv2580792,nssv2580751,nssv2579784,nssv2580750,nssv2580729,nssv2579790,nssv2580784,nssv2580741,nssv2580726,nssv2580779,nssv2580724,nssv2579786,nssv2580790,nssv2580769,nssv2580721,nssv2580748,nssv2580786,nssv2580758,nssv2580733,nssv2580757,nssv2580739,nssv2580746,nssv2580734,nssv2580777,nssv2580787,nssv2580759,nssv2580775,nssv2580753,nssv2580749,nssv2580763,nssv2580774,nssv2580781,nssv2580778,nssv2580762 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946732 1 142932197 142933616 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2580065,nssv2580839,nssv2580834,nssv2580054,nssv2580823,nssv2580837,nssv2580063,nssv2580851,nssv2580066,nssv2580857,nssv2580060,nssv2580842,nssv2580836,nssv2580853,nssv2580826,nssv2580868,nssv2580062,nssv2580865,nssv2580813,nssv2580805,nssv2580064,nssv2580859,nssv2580806,nssv2580854,nssv2580814,nssv2580860,nssv2580825,nssv2580845,nssv2580808,nssv2580841,nssv2580833,nssv2580828,nssv2580816,nssv2580864,nssv2580830,nssv2580867,nssv2580821,nssv2580057,nssv2580815,nssv2580831,nssv2580819,nssv2580848,nssv2580827,nssv2580858,nssv2580829,nssv2580852,nssv2580812,nssv2580843,nssv2580061,nssv2580850,nssv2580796,nssv2580053,nssv2580810,nssv2580068,nssv2580803,nssv2580804,nssv2580822,nssv2580847,nssv2580800,nssv2580844,nssv2580067,nssv2580846,nssv2580058,nssv2580832,nssv2580807,nssv2580052,nssv2580801,nssv2580862,nssv2580818,nssv2580840,nssv2580817,nssv2580856,nssv2580059,nssv2580795,nssv2580809,nssv2580863,nssv2580811,nssv2580866,nssv2580820,nssv2580802,nssv2580824,nssv2580794,nssv2580797,nssv2580855,nssv2580861,nssv2580838,nssv2580835,nssv2580055,nssv2580799,nssv2580849,nssv2580798,nssv2580056 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946733 1 142933616 142935551 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581081,nssv2581059,nssv2580072,nssv2581048,nssv2580093,nssv2581043,nssv2580094,nssv2581068,nssv2580092,nssv2581042,nssv2580078,nssv2581032,nssv2580084,nssv2581058,nssv2581029,nssv2581065,nssv2580088,nssv2581038,nssv2581077,nssv2581049,nssv2581082,nssv2580074,nssv2581030,nssv2581052,nssv2580098,nssv2580073,nssv2580103,nssv2581056,nssv2580085,nssv2581073,nssv2580097,nssv2581035,nssv2580102,nssv2581060,nssv2580075,nssv2581070,nssv2581084,nssv2581067,nssv2581076,nssv2581028,nssv2580071,nssv2580079,nssv2580099,nssv2581044,nssv2580091,nssv2581061,nssv2581080,nssv2580070,nssv2580086,nssv2580081,nssv2581036,nssv2581050,nssv2580076,nssv2581055,nssv2580082,nssv2581051,nssv2580089,nssv2580077,nssv2580090,nssv2581064,nssv2580100,nssv2581041,nssv2581079,nssv2581053,nssv2580087,nssv2580069,nssv2581075,nssv2580080,nssv2581033,nssv2581031,nssv2581078,nssv2581062,nssv2580083,nssv2581046,nssv2580095,nssv2581037,nssv2580101,nssv2581066,nssv2581083,nssv2581045,nssv2581034,nssv2581039,nssv2580096,nssv2581057,nssv2581047,nssv2581069,nssv2581072,nssv2581074,nssv2581063,nssv2581054,nssv2581040,nssv2581071 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946734 1 142935551 142936051 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581098,nssv2581093,nssv2581176,nssv2581130,nssv2581112,nssv2581137,nssv2581101,nssv2581140,nssv2581169,nssv2581153,nssv2581092,nssv2581154,nssv2581167,nssv2581163,nssv2581116,nssv2581138,nssv2581102,nssv2581086,nssv2581128,nssv2581141,nssv2581087,nssv2581156,nssv2581108,nssv2581147,nssv2581109,nssv2581151,nssv2581122,nssv2581136,nssv2581117,nssv2581131,nssv2581103,nssv2581127,nssv2581175,nssv2581144,nssv2581107,nssv2581149,nssv2581119,nssv2581143,nssv2581111,nssv2581152,nssv2581118,nssv2581120,nssv2581100,nssv2581124,nssv2581114,nssv2581157,nssv2581126,nssv2581089,nssv2581091,nssv2581095,nssv2581170,nssv2581164,nssv2581094,nssv2581155,nssv2581174,nssv2581148,nssv2581099,nssv2581142,nssv2581121,nssv2581134,nssv2581105,nssv2581160,nssv2581113,nssv2581123,nssv2581110,nssv2581158,nssv2581106,nssv2581135,nssv2581173,nssv2581133,nssv2581115,nssv2581150,nssv2581172,nssv2581090,nssv2581104,nssv2581162,nssv2581171,nssv2581145,nssv2581168,nssv2581159,nssv2581125,nssv2581166,nssv2581088,nssv2581161,nssv2581085,nssv2581129,nssv2581132,nssv2581146,nssv2581165,nssv2581096,nssv2581139,nssv2581097 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946226 1 142985551 143001846 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786888,nssv1786933,nssv1786953,nssv1786923,nssv1786874,nssv1786915,nssv1786955,nssv1786937,nssv1786881,nssv1786965,nssv1786898,nssv1786930,nssv1786872,nssv1786906,nssv1786895,nssv1786913,nssv1786952,nssv1786939,nssv1786879,nssv1786960,nssv1786949,nssv1786919,nssv1786873,nssv1786941,nssv1786950,nssv1786870,nssv1786947,nssv1786945,nssv1786876,nssv1786958,nssv1786884,nssv1786963,nssv1786954,nssv1786962,nssv1786877,nssv1786907,nssv1786891,nssv1786908,nssv1786948,nssv1786902,nssv1786887,nssv1786893,nssv1786885,nssv1786940,nssv1786889,nssv1786934,nssv1786883,nssv1786918,nssv1786886,nssv1786897,nssv1786894,nssv1786922,nssv1786892,nssv1786909,nssv1786890,nssv1786914,nssv1786901,nssv1786961,nssv1786871,nssv1786932,nssv1786899,nssv1786926,nssv1786882,nssv1786903,nssv1786880,nssv1786957,nssv1786875,nssv1786943,nssv1786956,nssv1786911,nssv1786951,nssv1786916,nssv1786878,nssv1786912,nssv1786924,nssv1786927,nssv1786959,nssv1786942,nssv1786921,nssv1786936,nssv1786944,nssv1786900,nssv1786964,nssv1786931,nssv1786905,nssv1786920,nssv1786904,nssv1786928,nssv1786966,nssv1786946,nssv1786917,nssv1786896,nssv1786938,nssv1786925,nssv1786929,nssv1786935,nssv1786910 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv25174 1 142985885 143113064 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15191,esv18861,esv16808,esv9790,esv17211 M 40 17 0 LINC00623,LOC100288142,LOC728875,PPIAL4A,PPIAL4B,PPIAL4C NA06985,NA07037,NA11894,NA11993,NA11995,NA12004,NA12006,NA12239,NA12414,NA12489,NA12749,NA12878,NA15510,NA18505,NA18511,NA18907,NA19099 nsv7958 1 142996736 142997971 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21419 M 31 0 1 LOC100288142 NA19173 nsv7969 1 143000941 143003150 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16747 M 31 1 0 LOC100288142 NA11830 nsv946227 1 143001846 143007447 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1786985,nssv1787022,nssv1787965,nssv1786999,nssv1786971,nssv1787017,nssv1787967,nssv1787953,nssv1787970,nssv1786994,nssv1786992,nssv1787012,nssv1787962,nssv1787002,nssv1787961,nssv1787013,nssv1786996,nssv1787020,nssv1786974,nssv1787001,nssv1787963,nssv1787956,nssv1786980,nssv1787023,nssv1786995,nssv1787015,nssv1786977,nssv1787957,nssv1786988,nssv1786967,nssv1786970,nssv1787004,nssv1787969,nssv1787003,nssv1786973,nssv1787009,nssv1786986,nssv1787000,nssv1787966,nssv1787954,nssv1786981,nssv1787007,nssv1786984,nssv1787016,nssv1787968,nssv1787960,nssv1786983,nssv1787019,nssv1786991,nssv1786997,nssv1786969,nssv1787006,nssv1786987,nssv1787010,nssv1786968,nssv1787951,nssv1786989,nssv1787005,nssv1786998,nssv1787952,nssv1786979,nssv1787021,nssv1786972,nssv1787958,nssv1787964,nssv1786990,nssv1786982,nssv1787008,nssv1786976,nssv1787950,nssv1786978,nssv1787955,nssv1786975,nssv1787014,nssv1787959,nssv1787018,nssv1787948,nssv1787949,nssv1787011,nssv1786993 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946228 1 143007447 143016974 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787996,nssv1788028,nssv1787982,nssv1788029,nssv1788051,nssv1788032,nssv1787989,nssv1788062,nssv1787975,nssv1788025,nssv1788056,nssv1788012,nssv1788054,nssv1788019,nssv1787990,nssv1788022,nssv1787979,nssv1788015,nssv1788057,nssv1788066,nssv1787999,nssv1788014,nssv1788048,nssv1787971,nssv1788050,nssv1788033,nssv1788000,nssv1788003,nssv1787985,nssv1788008,nssv1787992,nssv1788061,nssv1788053,nssv1788059,nssv1787983,nssv1788036,nssv1787978,nssv1788042,nssv1788055,nssv1788011,nssv1787995,nssv1788046,nssv1787987,nssv1788037,nssv1787977,nssv1787998,nssv1787988,nssv1788017,nssv1787986,nssv1788034,nssv1788002,nssv1788058,nssv1787974,nssv1788021,nssv1787991,nssv1788006,nssv1787984,nssv1787994,nssv1787981,nssv1788020,nssv1787972,nssv1788047,nssv1788049,nssv1788026,nssv1787980,nssv1788064,nssv1787976,nssv1788063,nssv1787993,nssv1788031,nssv1787973,nssv1788001,nssv1788052,nssv1788040,nssv1788044,nssv1788013,nssv1788030,nssv1788039,nssv1788045,nssv1788027,nssv1788018,nssv1788038,nssv1788043,nssv1788009,nssv1788007,nssv1788041,nssv1788067,nssv1788060,nssv1788035,nssv1787997,nssv1788010,nssv1788024,nssv1788004,nssv1788023,nssv1788065,nssv1788005,nssv1788016 M 97 10 0 LINC00623,LOC100288142,LOC728875 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7980 1 143010677 143012020 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv18446,nssv19761,nssv23396 M 31 0 3 LINC00623,LOC100288142,LOC728875 NA18860,NA19007,NA19221 nsv946229 1 143022991 143086472 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788148,nssv1788155,nssv1788082,nssv1788114,nssv1788072,nssv1788119,nssv1788093,nssv1787333,nssv1788086,nssv1788109,nssv1788070,nssv1788126,nssv1788081,nssv1788107,nssv1788087,nssv1788121,nssv1788151,nssv1788120,nssv1788153,nssv1788129,nssv1788080,nssv1788102,nssv1788145,nssv1787336,nssv1788147,nssv1788142,nssv1788076,nssv1788112,nssv1788096,nssv1788122,nssv1788077,nssv1788130,nssv1788079,nssv1787339,nssv1788083,nssv1788125,nssv1788099,nssv1788134,nssv1788075,nssv1788116,nssv1788152,nssv1788133,nssv1788074,nssv1788095,nssv1788150,nssv1788156,nssv1788092,nssv1788105,nssv1788084,nssv1787332,nssv1788085,nssv1788138,nssv1788149,nssv1788100,nssv1788154,nssv1788111,nssv1788088,nssv1787338,nssv1788071,nssv1787337,nssv1788146,nssv1787335,nssv1788089,nssv1788143,nssv1788073,nssv1788068,nssv1788078,nssv1788118,nssv1788069,nssv1788117,nssv1788097,nssv1788098,nssv1788090,nssv1788139,nssv1788101,nssv1788091,nssv1788131,nssv1787334,nssv1788128,nssv1788108,nssv1788144,nssv1788123,nssv1788106,nssv1788132,nssv1788137,nssv1788127,nssv1788115,nssv1788141,nssv1788110,nssv1788104,nssv1788103,nssv1788124,nssv1788094,nssv1788135,nssv1788140,nssv1788113,nssv1788136 M 97 10 0 LINC00623,LOC100288142,LOC728875,PPIAL4A,PPIAL4B,PPIAL4C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831281 1 143026080 143111804 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449562,nssv1449551,nssv1449584,nssv1449573 M 95 4 0 LINC00623,LOC100288142,LOC728875,PPIAL4A,PPIAL4B,PPIAL4C nsv946735 1 143032575 143072804 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581179,nssv2581185,nssv2581186,nssv2581178,nssv2581183,nssv2581181,nssv2581184,nssv2581187,nssv2581180,nssv2581177,nssv2581182 M 97 10 0 LINC00623,LOC100288142,LOC728875 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2512286 1 143033244 143271717 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5230501 M 1 1 0 LINC00623,LOC100288142,LOC728875,PPIAL4A,PPIAL4B,PPIAL4C NA18507 nsv7181 1 143045335 147560139 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10237,nssv10998,nssv4594,nssv5831,nssv1492,nssv9603,nssv1482,nssv11052,nssv9600,nssv9586,nssv6974,nssv6964,nssv2453,nssv2445,nssv6902,nssv3267,nssv1412,nssv3197,nssv6873,nssv9347,nssv2405,nssv3276,nssv10252,nssv5935,nssv3306,nssv9334,nssv4576 M 9 0 0 ACP6,ANKRD34A,ANKRD35,BCL9,CD160,CHD1L,FMO5,GJA5,GJA8,GNRHR2,GPR89A,GPR89B,GPR89C,HFE2,ITGA10,LINC00623,LINC00624,LINC01138,LIX1L,LOC100130000,LOC100288142,LOC101929780,LOC388692,LOC645166,LOC653513,LOC728875,LOC728989,MIR5087,MIR6077-1,MIR6077-2,MIR6736,NBPF10,NBPF11,NBPF12,NBPF13P,NBPF14,NBPF15,NBPF16,NBPF23,NBPF24,NBPF8,NBPF9,NOTCH2NL,NUDT17,PDE4DIP,PDIA3P1,PDZK1,PDZK1P1,PEX11B,PFN1P2,PIAS3,POLR3C,POLR3GL,PPIAL4A,PPIAL4B,PPIAL4C,PPIAL4D,PPIAL4E,PPIAL4F,PRKAB2,RBM8A,RNF115,SEC22B,TXNIP NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 dgv318n100 1 143049274 143596389 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008142,nsv1009682,nsv998833,nsv1014641 M 29084 5 0 LINC00623,LOC100288142,LOC653513,LOC728875,NBPF12,NBPF8,NBPF9,PDE4DIP,PFN1P2,PPIAL4A,PPIAL4B,PPIAL4C esv3333165 1 143049452 143050950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691880 M 185 1 0 LINC00623,LOC100288142,LOC728875 NA12878 esv3894078 1 143060579 143193189 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25792373 M 3017 1 0 LOC100288142,LOC728875,PPIAL4A,PPIAL4B,PPIAL4C nsv946736 1 143078186 143098446 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581195,nssv2581189,nssv2581194,nssv2581198,nssv2581190,nssv2581196,nssv2581197,nssv2581192,nssv2581191,nssv2581188,nssv2581193 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946230 1 143088672 143113167 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787343,nssv1787391,nssv1787344,nssv1787413,nssv1787423,nssv1787412,nssv1787358,nssv1787363,nssv1787359,nssv1787401,nssv1787425,nssv1787392,nssv1787348,nssv1787377,nssv1787418,nssv1787385,nssv1787355,nssv1787379,nssv1787350,nssv1787384,nssv1787349,nssv1787378,nssv1787346,nssv1787395,nssv1787351,nssv1787397,nssv1787342,nssv1787436,nssv1787417,nssv1787398,nssv1787419,nssv1787427,nssv1787352,nssv1787414,nssv1787422,nssv1787408,nssv1787356,nssv1787366,nssv1787371,nssv1787402,nssv1787424,nssv1787399,nssv1787361,nssv1787381,nssv1787420,nssv1787429,nssv1787357,nssv1787407,nssv1787365,nssv1787433,nssv1787364,nssv1787405,nssv1787354,nssv1787411,nssv1787353,nssv1787396,nssv1787368,nssv1787388,nssv1787360,nssv1787435,nssv1787341,nssv1787416,nssv1787362,nssv1787393,nssv1787369,nssv1787432,nssv1787347,nssv1787370,nssv1787345,nssv1787380,nssv1787426,nssv1787409,nssv1787421,nssv1787390,nssv1787434,nssv1787415,nssv1787386,nssv1787372,nssv1787400,nssv1787383,nssv1787394,nssv1787410,nssv1787430,nssv1787375,nssv1787431,nssv1787367,nssv1787340,nssv1787428,nssv1787389,nssv1787403,nssv1787382,nssv1787374,nssv1787387,nssv1787376,nssv1787373,nssv1787406,nssv1787404 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26682 1 143163138 143238273 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10584,esv10891,esv20623 M 40 10 0 LOC100288142,LOC728875 NA07037,NA11894,NA11931,NA12004,NA12006,NA12414,NA12489,NA18505,NA18909,NA19129 nsv946231 1 143164107 143183439 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787445,nssv1787495,nssv1787444,nssv1787513,nssv1787520,nssv1787482,nssv1787455,nssv1787491,nssv1787465,nssv1787470,nssv1787468,nssv1787510,nssv1787452,nssv1787473,nssv1787515,nssv1787500,nssv1787440,nssv1787484,nssv1787443,nssv1787479,nssv1787441,nssv1787492,nssv1787456,nssv1787509,nssv1787449,nssv1787460,nssv1787516,nssv1787471,nssv1787514,nssv1787485,nssv1787448,nssv1787481,nssv1787519,nssv1787489,nssv1787451,nssv1787467,nssv1787518,nssv1787498,nssv1787450,nssv1787478,nssv1787466,nssv1787524,nssv1787521,nssv1787474,nssv1787458,nssv1787526,nssv1787453,nssv1787494,nssv1787517,nssv1787504,nssv1787447,nssv1787475,nssv1787522,nssv1787505,nssv1787461,nssv1787463,nssv1787454,nssv1787488,nssv1787457,nssv1787499,nssv1787462,nssv1787496,nssv1787446,nssv1787533,nssv1787438,nssv1787511,nssv1787459,nssv1787530,nssv1787442,nssv1787487,nssv1787439,nssv1787508,nssv1787523,nssv1787501,nssv1787469,nssv1787529,nssv1787502,nssv1787493,nssv1787476,nssv1787480,nssv1787512,nssv1787531,nssv1787532,nssv1787490,nssv1787497,nssv1787525,nssv1787527,nssv1787506,nssv1787507,nssv1787528,nssv1787483,nssv1787437,nssv1787503,nssv1787472,nssv1787464,nssv1787486,nssv1787477 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8003 1 143172670 143176438 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv19082 M 31 0 1 LOC100288142 NA07029 nsv8014 1 143180747 143183631 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17407 M 31 1 0 LOC100288142 NA11830 nsv1001693 1 143183331 144001649 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501049 M 29084 1 0 LOC100288142,LOC101929780,LOC653513,LOC728875,NBPF12,NBPF8,NBPF9,NOTCH2NL,PDE4DIP,PFN1P2,SEC22B nsv946232 1 143183439 143185824 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787562,nssv1787569,nssv1787549,nssv1787576,nssv1787548,nssv1787568,nssv1787545,nssv1787574,nssv1787538,nssv1787600,nssv1787553,nssv1787593,nssv1787541,nssv1787583,nssv1787563,nssv1787564,nssv1787565,nssv1787598,nssv1787605,nssv1787557,nssv1787537,nssv1787570,nssv1787604,nssv1787592,nssv1787542,nssv1787582,nssv1787540,nssv1787581,nssv1787606,nssv1787567,nssv1787546,nssv1787588,nssv1787609,nssv1787572,nssv1787610,nssv1787595,nssv1787544,nssv1787589,nssv1787536,nssv1787586,nssv1787611,nssv1787597,nssv1787608,nssv1787591,nssv1787555,nssv1787579,nssv1787543,nssv1787571,nssv1787551,nssv1787601,nssv1787558,nssv1787560,nssv1787550,nssv1787602,nssv1787552,nssv1787578,nssv1787607,nssv1787585,nssv1787554,nssv1787561,nssv1787547,nssv1787596,nssv1787535,nssv1787575,nssv1787559,nssv1787573,nssv1787556,nssv1787599,nssv1787612,nssv1787566,nssv1787613,nssv1787534,nssv1787539,nssv1787590,nssv1787587,nssv1787594,nssv1787603,nssv1787584,nssv1787580,nssv1787577 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946233 1 143185824 143200039 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1787632,nssv1788629,nssv1787633,nssv1788609,nssv1787618,nssv1788565,nssv1787616,nssv1788572,nssv1787631,nssv1788574,nssv1787617,nssv1788575,nssv1788621,nssv1788608,nssv1787623,nssv1788578,nssv1788624,nssv1788591,nssv1787620,nssv1788588,nssv1788617,nssv1788584,nssv1788615,nssv1788585,nssv1787627,nssv1788605,nssv1788569,nssv1788568,nssv1787625,nssv1788631,nssv1787621,nssv1788598,nssv1787626,nssv1788607,nssv1787629,nssv1788580,nssv1787622,nssv1788587,nssv1787624,nssv1788602,nssv1787628,nssv1788582,nssv1788567,nssv1788596,nssv1788623,nssv1788614,nssv1787635,nssv1787637,nssv1788620,nssv1788564,nssv1788566,nssv1788595,nssv1787638,nssv1788597,nssv1787630,nssv1788606,nssv1788622,nssv1788593,nssv1788619,nssv1788573,nssv1787634,nssv1788601,nssv1787636,nssv1788633,nssv1787639,nssv1788632,nssv1787615,nssv1788600,nssv1788616,nssv1788634,nssv1788618,nssv1788594,nssv1787619,nssv1788627,nssv1788610,nssv1788589,nssv1788583,nssv1788590,nssv1788611,nssv1788599,nssv1788579,nssv1788577,nssv1788576,nssv1788612,nssv1788604,nssv1788571,nssv1788613,nssv1788603,nssv1788625,nssv1788626,nssv1788592,nssv1788570,nssv1788586,nssv1787614,nssv1788630,nssv1788581,nssv1788628 M 97 10 0 LOC100288142,LOC728875 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946235 1 143204382 143221373 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581208,nssv2581204,nssv2581206,nssv2581200,nssv2581205,nssv2581199,nssv2581201,nssv2581209,nssv2581203,nssv2581202,nssv2581207 M 97 10 0 LOC100288142,LOC728875 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946234 1 143204382 143244782 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788657,nssv1788674,nssv1788666,nssv1788678,nssv1788718,nssv1788727,nssv1788653,nssv1788706,nssv1788639,nssv1788700,nssv1788645,nssv1788677,nssv1788716,nssv1788690,nssv1788649,nssv1788662,nssv1788712,nssv1788673,nssv1788654,nssv1788726,nssv1788714,nssv1788705,nssv1788637,nssv1788669,nssv1788643,nssv1788702,nssv1788644,nssv1788685,nssv1788719,nssv1788688,nssv1788648,nssv1788672,nssv1788641,nssv1788671,nssv1788721,nssv1788693,nssv1788717,nssv1788684,nssv1788638,nssv1788728,nssv1788663,nssv1788681,nssv1788664,nssv1788665,nssv1788646,nssv1788658,nssv1788659,nssv1788682,nssv1788651,nssv1788704,nssv1788660,nssv1788692,nssv1788713,nssv1788711,nssv1788655,nssv1788699,nssv1788652,nssv1788675,nssv1788650,nssv1788695,nssv1788715,nssv1788698,nssv1788640,nssv1788703,nssv1788647,nssv1788661,nssv1788642,nssv1788683,nssv1788720,nssv1788691,nssv1788656,nssv1788679,nssv1788636,nssv1788729,nssv1788731,nssv1788708,nssv1788686,nssv1788687,nssv1788701,nssv1788707,nssv1788670,nssv1788724,nssv1788730,nssv1788697,nssv1788694,nssv1788667,nssv1788696,nssv1788723,nssv1788680,nssv1788709,nssv1788725,nssv1788635,nssv1788722,nssv1788668,nssv1788710,nssv1788676,nssv1788689 M 97 10 0 LOC100288142,LOC728875 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8025 1 143213388 143238397 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv18063,nssv19757,nssv19106,nssv23981,nssv18439,nssv17737,nssv17422,nssv20418,nssv25963,nssv16085 M 31 10 0 LOC100288142,LOC728875 NA07048,NA10839,NA10847,NA11830,NA18563,NA18564,NA18572,NA18942,NA18972,NA19007 esv3336372 1 143216852 143219950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691881 M 185 1 0 LOC100288142,LOC728875 NA12878 nsv831292 1 143217450 143324868 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1449595,nssv1449606 M 95 1 1 LOC100288142,LOC728875,NBPF12,PFN1P2 nsv946737 1 143221993 143238448 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581213,nssv2581210,nssv2581212,nssv2581211,nssv2581216,nssv2581220,nssv2581217,nssv2581215,nssv2581219,nssv2581218,nssv2581214 M 97 10 0 LOC100288142,LOC728875 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3353489 1 143226352 143230850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691882 M 185 1 0 LOC100288142,LOC728875 NA12892 nsv831303 1 143235000 143328572 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449617,nssv1449629 M 95 0 2 LOC100288142,NBPF12,NBPF8,NBPF9,PFN1P2 nsv946237 1 143244782 143247158 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788741,nssv1789086,nssv1788738,nssv1788756,nssv1788734,nssv1788737,nssv1788735,nssv1789082,nssv1788739,nssv1788765,nssv1788769,nssv1788749,nssv1788732,nssv1788748,nssv1788764,nssv1788742,nssv1788751,nssv1789080,nssv1788750,nssv1789085,nssv1788744,nssv1788747,nssv1788733,nssv1788740,nssv1788746,nssv1788760,nssv1788759,nssv1788763,nssv1789081,nssv1789084,nssv1788767,nssv1788768,nssv1788745,nssv1788736,nssv1788758,nssv1788752,nssv1788770,nssv1788757,nssv1789083,nssv1788754,nssv1788761,nssv1788766,nssv1788762,nssv1788753,nssv1788743,nssv1788771,nssv1789087,nssv1788755 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3414333 1 143247786 143248603 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808908 M 185 1 0 LOC100288142 NA12878 nsv946239 1 143249830 143250330 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581230,nssv2581224,nssv2581223,nssv2581222,nssv2581228,nssv2581225,nssv2581227,nssv2581226,nssv2581231,nssv2581229,nssv2581221 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946238 1 143249830 143277149 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789161,nssv1789135,nssv1789100,nssv1789147,nssv1789103,nssv1789154,nssv1789158,nssv1789121,nssv1789162,nssv1789151,nssv1789090,nssv1789138,nssv1789106,nssv1789152,nssv1789110,nssv1789156,nssv1789092,nssv1789133,nssv1789105,nssv1789132,nssv1789098,nssv1789128,nssv1789096,nssv1789137,nssv1789113,nssv1789130,nssv1789094,nssv1789115,nssv1789163,nssv1789123,nssv1789095,nssv1789143,nssv1789091,nssv1789140,nssv1789102,nssv1789131,nssv1789117,nssv1789155,nssv1789166,nssv1789153,nssv1789160,nssv1789144,nssv1789089,nssv1789111,nssv1789097,nssv1789134,nssv1789109,nssv1789120,nssv1789165,nssv1789129,nssv1789116,nssv1789142,nssv1789112,nssv1789127,nssv1789101,nssv1789088,nssv1789167,nssv1789136,nssv1789099,nssv1789118,nssv1789104,nssv1789126,nssv1789164,nssv1789150,nssv1789107,nssv1789122,nssv1789159,nssv1789139,nssv1789119,nssv1789157,nssv1789108,nssv1789124,nssv1789093,nssv1789146,nssv1789148,nssv1789145,nssv1789125,nssv1789141,nssv1789114,nssv1789149 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946738 1 143251180 143256620 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581241,nssv2581237,nssv2581235,nssv2581232,nssv2581234,nssv2581242,nssv2581238,nssv2581236,nssv2581239,nssv2581233,nssv2581240 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv8n82 1 143278981 143290142 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946739,nsv946240 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv159823 1 143288715 143288715 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178401 M 24 LOC100288142 nsv946740 1 143288756 143299903 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581264,nssv2581256,nssv2581258,nssv2581260,nssv2581257,nssv2581259,nssv2581261,nssv2581263,nssv2581262,nssv2581255,nssv2581265 M 97 10 0 LOC100288142 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946242 1 143299903 143333468 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789887,nssv1789917,nssv1789886,nssv1789950,nssv1789910,nssv1789968,nssv1789958,nssv1789941,nssv1789906,nssv1789918,nssv1789885,nssv1789938,nssv1789963,nssv1789936,nssv1789899,nssv1789946,nssv1789894,nssv1789973,nssv1789959,nssv1789932,nssv1789903,nssv1789939,nssv1789966,nssv1789881,nssv1789891,nssv1789934,nssv1789896,nssv1789915,nssv1789964,nssv1789971,nssv1789892,nssv1789913,nssv1789900,nssv1789974,nssv1789884,nssv1789949,nssv1789909,nssv1789921,nssv1789893,nssv1789957,nssv1789895,nssv1789945,nssv1789882,nssv1789944,nssv1789889,nssv1789927,nssv1789961,nssv1789929,nssv1789902,nssv1789930,nssv1789883,nssv1789952,nssv1789960,nssv1789908,nssv1789890,nssv1789928,nssv1789905,nssv1789933,nssv1789888,nssv1789923,nssv1789897,nssv1789914,nssv1789962,nssv1789955,nssv1789912,nssv1789969,nssv1789965,nssv1789926,nssv1789901,nssv1789904,nssv1789898,nssv1789956,nssv1789967,nssv1789943,nssv1789916,nssv1789947,nssv1789951,nssv1789954,nssv1789953,nssv1789911,nssv1789924,nssv1789937,nssv1789972,nssv1789940,nssv1789931,nssv1789970,nssv1789919,nssv1789942,nssv1789907,nssv1789925,nssv1789922,nssv1789976,nssv1789977,nssv1789935,nssv1789948,nssv1789975,nssv1789920 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9,PFN1P2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv191e59 1 143307560 146550540 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3366694,esv3377415 M 185 0 0 ACP6,ANKRD34A,ANKRD35,BCL9,CD160,CHD1L,FMO5,GJA5,GJA8,GNRHR2,GPR89A,GPR89B,GPR89C,HFE2,ITGA10,LINC00624,LINC01138,LIX1L,LOC100130000,LOC100288142,LOC101929780,LOC653513,LOC728989,MIR5087,MIR6077-1,MIR6077-2,MIR6736,NBPF10,NBPF11,NBPF12,NBPF13P,NBPF24,NBPF8,NBPF9,NOTCH2NL,NUDT17,PDE4DIP,PDIA3P1,PDZK1,PDZK1P1,PEX11B,PFN1P2,PIAS3,POLR3C,POLR3GL,PPIAL4A,PRKAB2,RBM8A,RNF115,SEC22B,TXNIP NA12878 nsv946741 1 143317510 143323913 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581268,nssv2581270,nssv2581269,nssv2581266,nssv2581276,nssv2581271,nssv2581275,nssv2581274,nssv2581272,nssv2581267,nssv2581273 M 97 10 0 LOC100288142,NBPF12,PFN1P2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv24514 1 143321618 143333547 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv9932,esv13686 M 40 8 0 LOC100288142,NBPF12,NBPF8,NBPF9,PFN1P2 NA06985,NA07045,NA12006,NA15510,NA18523,NA18916,NA19099,NA19114 nsv946742 1 143323913 143333468 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582269,nssv2582280,nssv2581313,nssv2582274,nssv2581328,nssv2581305,nssv2581311,nssv2581279,nssv2581332,nssv2581282,nssv2582260,nssv2581289,nssv2582262,nssv2581296,nssv2582261,nssv2581297,nssv2582265,nssv2581308,nssv2581309,nssv2581291,nssv2581333,nssv2581280,nssv2581317,nssv2581306,nssv2581322,nssv2581283,nssv2581330,nssv2582279,nssv2582267,nssv2581290,nssv2581326,nssv2581298,nssv2581324,nssv2581286,nssv2581312,nssv2582275,nssv2582263,nssv2581302,nssv2581334,nssv2581295,nssv2582268,nssv2582276,nssv2581320,nssv2581288,nssv2581316,nssv2582272,nssv2581314,nssv2581281,nssv2582266,nssv2581292,nssv2581335,nssv2581278,nssv2582264,nssv2581299,nssv2581315,nssv2582273,nssv2582270,nssv2582278,nssv2581327,nssv2581301,nssv2581318,nssv2581285,nssv2581307,nssv2581294,nssv2581319,nssv2582271,nssv2581331,nssv2582277,nssv2581321,nssv2581293,nssv2581329,nssv2581287,nssv2581304,nssv2581284,nssv2581300,nssv2581310,nssv2581323,nssv2581325,nssv2581277,nssv2581303 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9,PFN1P2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv192e59 1 143325952 143333450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3432201,esv3413293 M 185 2 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA19238,NA19239 nsv436028 1 143329500 144002758 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465609 M 2 1 0 LOC100288142,LOC101929780,LOC653513,NBPF12,NBPF8,NBPF9,NOTCH2NL,PDE4DIP,SEC22B NA15510 nsv436765 1 143330655 143333206 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465621 M 2 1 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA18505 nsv946743 1 143383752 143385996 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582290,nssv2582281,nssv2582291,nssv2582289,nssv2582283,nssv2582286,nssv2582284,nssv2582282,nssv2582287,nssv2582285,nssv2582288 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv23047 1 143383800 143422051 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12656 M 40 12 0 LOC100288142,LOC653513,NBPF12,NBPF8,NBPF9 NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12239,NA12287,NA12414,NA12749,NA12878,NA18505 esv999428 1 143383800 143422081 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586330 M 3 0 1 LOC100288142,LOC653513,NBPF12,NBPF8,NBPF9 HuRef dgv193e59 1 143384052 143389850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3340909,esv3330699 M 185 2 0 LOC100288142,LOC653513,NBPF12,NBPF8,NBPF9 NA12878,NA12892 dgv13n16 1 143386062 143664413 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436025,nsv436804 M 2 2 0 LOC100288142,LOC653513,NBPF12,NBPF8,NBPF9,PDE4DIP NA15510,NA18505 dgv194e59 1 143386252 143389850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3415759,esv3361540,esv3412483 M 185 3 0 LOC100288142,LOC653513,NBPF12,NBPF8,NBPF9 NA12891,NA19239,NA19240 dgv195e59 1 143390452 143421950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3388090,esv3363569,esv3350539 M 185 3 0 LOC100288142,LOC653513,NBPF12,NBPF8,NBPF9 NA12878,NA12892,NA19240 dgv196e59 1 143391452 143397650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3417102,esv3418039,esv3418537 M 185 3 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA12891,NA19238,NA19239 nsv946243 1 143392669 143422182 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789981,nssv1790019,nssv1789984,nssv1790023,nssv1789980,nssv1790000,nssv1789985,nssv1790011,nssv1789987,nssv1790016,nssv1789995,nssv1790024,nssv1790017,nssv1790014,nssv1789999,nssv1790025,nssv1789990,nssv1790007,nssv1790004,nssv1790002,nssv1789988,nssv1790013,nssv1789978,nssv1789992,nssv1789993,nssv1790003,nssv1790020,nssv1790009,nssv1789983,nssv1790008,nssv1789998,nssv1790001,nssv1790021,nssv1789986,nssv1789979,nssv1790005,nssv1790022,nssv1789989,nssv1789996,nssv1790010,nssv1790018,nssv1789991,nssv1790012,nssv1789997,nssv1789994,nssv1789982,nssv1790015,nssv1790006 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3341108 1 143398052 143402050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691898 M 185 1 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA19238 dgv197e59 1 143398152 143417250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3368929,esv3419121 M 185 2 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA12891,NA19239 esv3355032 1 143406552 143410250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691901 M 185 1 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA19238 esv3449374 1 143414052 143421750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691902 M 185 1 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA19239 esv3326680 1 143415252 143417250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691903 M 185 1 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA19238 dgv198e59 1 143417752 143421750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3352597,esv3448088 M 185 2 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA12891,NA19240 esv3443136 1 143418052 143420550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691906 M 185 1 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA19238 dgv14n16 1 143421239 143698384 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv435736,nsv436611 M 2 0 2 LOC100288142,NBPF12,NBPF8,NBPF9,PDE4DIP NA15510,NA18505 esv23161 1 143522106 143594233 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13384,esv21270,esv17398,esv11204,esv18675,esv12088 M 40 11 0 LOC100288142,NBPF12,NBPF8,NBPF9,PDE4DIP NA06985,NA07045,NA12489,NA12776,NA15510,NA18523,NA18907,NA18909,NA18916,NA19099,NA19114 nsv946245 1 143522896 143533362 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582311,nssv2582361,nssv2582305,nssv2582336,nssv2582364,nssv2582359,nssv2582293,nssv2582351,nssv2582368,nssv2582358,nssv2582309,nssv2582337,nssv2582367,nssv2582328,nssv2582321,nssv2582347,nssv2582312,nssv2582334,nssv2582301,nssv2582318,nssv2582300,nssv2582350,nssv2582370,nssv2582340,nssv2582298,nssv2582326,nssv2582323,nssv2582329,nssv2582299,nssv2582345,nssv2582308,nssv2582339,nssv2582363,nssv2582352,nssv2582371,nssv2582292,nssv2582294,nssv2582343,nssv2582362,nssv2582325,nssv2582306,nssv2582355,nssv2582366,nssv2582335,nssv2582316,nssv2582356,nssv2582314,nssv2582346,nssv2582365,nssv2582357,nssv2582307,nssv2582349,nssv2582302,nssv2582327,nssv2582296,nssv2582330,nssv2582313,nssv2582319,nssv2582295,nssv2582338,nssv2582304,nssv2582354,nssv2582310,nssv2582333,nssv2582297,nssv2582360,nssv2582303,nssv2582324,nssv2582369,nssv2582344,nssv2582320,nssv2582331,nssv2582317,nssv2582341,nssv2582348,nssv2582332,nssv2582315,nssv2582322,nssv2582353,nssv2582342 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946244 1 143522896 143608865 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790728,nssv1790098,nssv1790032,nssv1790076,nssv1790027,nssv1790093,nssv1790044,nssv1790081,nssv1790045,nssv1790080,nssv1790031,nssv1790100,nssv1790030,nssv1790052,nssv1790036,nssv1790077,nssv1790722,nssv1790086,nssv1790724,nssv1790065,nssv1790041,nssv1790732,nssv1790039,nssv1790087,nssv1790051,nssv1790067,nssv1790048,nssv1790070,nssv1790028,nssv1790084,nssv1790029,nssv1790733,nssv1790725,nssv1790102,nssv1790038,nssv1790062,nssv1790057,nssv1790060,nssv1790047,nssv1790026,nssv1790040,nssv1790099,nssv1790103,nssv1790731,nssv1790054,nssv1790058,nssv1790034,nssv1790095,nssv1790050,nssv1790094,nssv1790037,nssv1790735,nssv1790723,nssv1790090,nssv1790721,nssv1790074,nssv1790035,nssv1790072,nssv1790042,nssv1790063,nssv1790046,nssv1790083,nssv1790726,nssv1790073,nssv1790055,nssv1790091,nssv1790043,nssv1790071,nssv1790033,nssv1790734,nssv1790720,nssv1790089,nssv1790727,nssv1790069,nssv1790097,nssv1790075,nssv1790092,nssv1790059,nssv1790079,nssv1790066,nssv1790101,nssv1790068,nssv1790053,nssv1790061,nssv1790737,nssv1790736,nssv1790078,nssv1790064,nssv1790096,nssv1790730,nssv1790738,nssv1790049,nssv1790056,nssv1790088,nssv1790082,nssv1790729,nssv1790085 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9,PDE4DIP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831315 1 143525165 143673833 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449640 M 95 0 1 LOC100288142,NBPF12,NBPF8,NBPF9,PDE4DIP nsv8047 1 143534197 143540659 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19748 M 31 1 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA12155 esv3329131 1 143534252 143541650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691907 M 185 1 0 LOC100288142,NBPF12,NBPF8,NBPF9 NA19238 nsv946744 1 143534467 143535195 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582440,nssv2582381,nssv2582419,nssv2582413,nssv2582407,nssv2582405,nssv2582427,nssv2582106,nssv2582441,nssv2582394,nssv2582384,nssv2582382,nssv2582102,nssv2582404,nssv2582439,nssv2582392,nssv2582101,nssv2582399,nssv2582422,nssv2582395,nssv2582433,nssv2582389,nssv2582420,nssv2582110,nssv2582442,nssv2582401,nssv2582443,nssv2582409,nssv2582434,nssv2582403,nssv2582417,nssv2582385,nssv2582380,nssv2582396,nssv2582428,nssv2582415,nssv2582426,nssv2582379,nssv2582447,nssv2582114,nssv2582373,nssv2582115,nssv2582444,nssv2582387,nssv2582421,nssv2582108,nssv2582103,nssv2582107,nssv2582377,nssv2582374,nssv2582414,nssv2582408,nssv2582438,nssv2582412,nssv2582105,nssv2582406,nssv2582418,nssv2582109,nssv2582383,nssv2582112,nssv2582372,nssv2582400,nssv2582436,nssv2582375,nssv2582429,nssv2582111,nssv2582425,nssv2582378,nssv2582446,nssv2582393,nssv2582431,nssv2582390,nssv2582445,nssv2582386,nssv2582424,nssv2582397,nssv2582430,nssv2582402,nssv2582411,nssv2582391,nssv2582423,nssv2582398,nssv2582432,nssv2582113,nssv2582410,nssv2582416,nssv2582448,nssv2582388,nssv2582435,nssv2582104,nssv2582376,nssv2582437 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946745 1 143535195 143536398 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582134,nssv2582195,nssv2582126,nssv2582184,nssv2582145,nssv2582163,nssv2582198,nssv2582191,nssv2582138,nssv2582187,nssv2582144,nssv2582194,nssv2582129,nssv2582116,nssv2582159,nssv2582166,nssv2582125,nssv2582196,nssv2582150,nssv2582179,nssv2582152,nssv2582182,nssv2582199,nssv2582167,nssv2582207,nssv2582177,nssv2582202,nssv2582190,nssv2582156,nssv2582189,nssv2582141,nssv2582121,nssv2582206,nssv2582172,nssv2582157,nssv2582171,nssv2582147,nssv2582124,nssv2582149,nssv2582178,nssv2582119,nssv2582193,nssv2582200,nssv2582117,nssv2582148,nssv2582192,nssv2582142,nssv2582165,nssv2582143,nssv2582180,nssv2582132,nssv2582154,nssv2582203,nssv2582164,nssv2582136,nssv2582183,nssv2582131,nssv2582162,nssv2582130,nssv2582170,nssv2582205,nssv2582120,nssv2582146,nssv2582176,nssv2582122,nssv2582169,nssv2582140,nssv2582155,nssv2582137,nssv2582181,nssv2582204,nssv2582127,nssv2582139,nssv2582161,nssv2582123,nssv2582128,nssv2582133,nssv2582151,nssv2582135,nssv2582173,nssv2582201,nssv2582175,nssv2582118,nssv2582174,nssv2582160,nssv2582168,nssv2582153,nssv2582188,nssv2582185,nssv2582197,nssv2582158,nssv2582186 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946746 1 143536398 143538536 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582226,nssv2582210,nssv2582221,nssv2583190,nssv2582239,nssv2582250,nssv2582215,nssv2582257,nssv2582218,nssv2582217,nssv2582235,nssv2583211,nssv2582252,nssv2582259,nssv2582248,nssv2583199,nssv2582231,nssv2583208,nssv2582232,nssv2583192,nssv2583223,nssv2583205,nssv2582225,nssv2583193,nssv2582241,nssv2582255,nssv2582245,nssv2583186,nssv2583220,nssv2583187,nssv2582236,nssv2582258,nssv2582227,nssv2582209,nssv2582242,nssv2583198,nssv2582223,nssv2582246,nssv2583215,nssv2582256,nssv2583216,nssv2583209,nssv2582222,nssv2582220,nssv2582249,nssv2582208,nssv2582251,nssv2582253,nssv2582212,nssv2583203,nssv2582219,nssv2583196,nssv2583218,nssv2583191,nssv2583222,nssv2582247,nssv2582237,nssv2583207,nssv2582233,nssv2582243,nssv2582230,nssv2583204,nssv2582224,nssv2583184,nssv2582234,nssv2583197,nssv2582229,nssv2583195,nssv2582211,nssv2583188,nssv2583217,nssv2583189,nssv2582240,nssv2583213,nssv2583219,nssv2583212,nssv2582238,nssv2582213,nssv2582216,nssv2583206,nssv2583221,nssv2582214,nssv2582244,nssv2583200,nssv2583214,nssv2583202,nssv2582228,nssv2583185,nssv2583194,nssv2583210,nssv2582254,nssv2583201 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946747 1 143538536 143539036 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583235,nssv2583304,nssv2583268,nssv2583266,nssv2583232,nssv2583298,nssv2583267,nssv2583303,nssv2583256,nssv2583259,nssv2583250,nssv2583272,nssv2583307,nssv2583285,nssv2583240,nssv2583282,nssv2583228,nssv2583275,nssv2583238,nssv2583278,nssv2583248,nssv2583290,nssv2583264,nssv2583277,nssv2583311,nssv2583288,nssv2583257,nssv2583295,nssv2583237,nssv2583291,nssv2583245,nssv2583236,nssv2583251,nssv2583284,nssv2583246,nssv2583274,nssv2583310,nssv2583302,nssv2583260,nssv2583262,nssv2583312,nssv2583269,nssv2583241,nssv2583293,nssv2583234,nssv2583225,nssv2583309,nssv2583299,nssv2583308,nssv2583296,nssv2583306,nssv2583230,nssv2583255,nssv2583287,nssv2583261,nssv2583292,nssv2583243,nssv2583300,nssv2583244,nssv2583226,nssv2583227,nssv2583224,nssv2583313,nssv2583283,nssv2583314,nssv2583305,nssv2583254,nssv2583270,nssv2583247,nssv2583301,nssv2583231,nssv2583297,nssv2583253,nssv2583263,nssv2583249,nssv2583276,nssv2583239,nssv2583280,nssv2583315,nssv2583289,nssv2583242,nssv2583233,nssv2583258,nssv2583271,nssv2583252,nssv2583281,nssv2583265,nssv2583279,nssv2583286,nssv2583273,nssv2583294,nssv2583229 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946748 1 143539036 143539950 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583327,nssv2583317,nssv2583319,nssv2583325,nssv2583323,nssv2583322,nssv2583326,nssv2583318,nssv2583324,nssv2583316,nssv2583320,nssv2583321 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946749 1 143539036 143541570 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583360,nssv2583369,nssv2583329,nssv2583374,nssv2583405,nssv2583358,nssv2583347,nssv2583387,nssv2583345,nssv2583373,nssv2583342,nssv2583328,nssv2583348,nssv2583392,nssv2583330,nssv2583389,nssv2583407,nssv2583380,nssv2583341,nssv2583397,nssv2583398,nssv2583382,nssv2583332,nssv2583375,nssv2583399,nssv2583384,nssv2583339,nssv2583393,nssv2583335,nssv2583364,nssv2583337,nssv2583370,nssv2583350,nssv2583377,nssv2583331,nssv2583355,nssv2583353,nssv2583372,nssv2583340,nssv2583381,nssv2583356,nssv2583391,nssv2583344,nssv2583396,nssv2583349,nssv2583378,nssv2583402,nssv2583366,nssv2583352,nssv2583385,nssv2583404,nssv2583395,nssv2583336,nssv2583365,nssv2583406,nssv2583362,nssv2583333,nssv2583351,nssv2583359,nssv2583383,nssv2583357,nssv2583379,nssv2583403,nssv2583367,nssv2583346,nssv2583361,nssv2583401,nssv2583363,nssv2583338,nssv2583368,nssv2583334,nssv2583376,nssv2583400,nssv2583390,nssv2583343,nssv2583386,nssv2583388,nssv2583354,nssv2583371,nssv2583394 M 97 10 0 LOC100288142,NBPF12,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2761854 1 143543612 143633214 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6995700,essv6995689 M 1109 2 0 LOC100288142,NBPF12,PDE4DIP SW_1378,SW_1505 esv2630464 1 143552436 143605023 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5197025 M 1 1 0 LOC100288142,NBPF12,PDE4DIP NA18507 dgv15n16 1 143563769 144980639 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436388,nsv435911 M 2 0 2 ANKRD34A,ANKRD35,CD160,GNRHR2,GPR89A,GPR89C,HFE2,ITGA10,LIX1L,LOC100288142,LOC101929780,LOC728989,MIR6736,NBPF11,NBPF12,NBPF24,NOTCH2NL,NUDT17,PDE4DIP,PDZK1,PDZK1P1,PEX11B,PIAS3,POLR3C,POLR3GL,RBM8A,RNF115,SEC22B,TXNIP NA15510,NA18505 nsv510962 1 143574007 143996560 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622425,nssv624361 M 4 0 0 LOC100288142,NBPF12,NOTCH2NL,PDE4DIP,SEC22B NA10860,NA18994 nsv509457 1 143574007 144198419 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621102 M 4 1 0 ANKRD34A,HFE2,LIX1L,LOC100288142,LOC101929780,NBPF12,NOTCH2NL,PDE4DIP,POLR3GL,SEC22B,TXNIP NA15510 nsv1009283 1 143576984 143662326 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702091,nssv3501002 M 29084 2 0 LOC100288142,NBPF12,PDE4DIP nsv1005230 1 143576984 143863177 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490049 M 29084 1 0 LOC100288142,NBPF12,PDE4DIP,SEC22B nsv469838 1 143581292 143720494 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1674174 M 265 0 1 LOC100288142,NBPF12,PDE4DIP nsv471603 1 143581293 143720494 CNV loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550824,nssv550825 M 48 0 2 LOC100288142,NBPF12,PDE4DIP NA11521,NA15732 nsv2 1 143586336 143624905 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv2 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA15510 nsv2633 1 143586336 143624905 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11009 M 9 0 1 LOC100288142,NBPF12,PDE4DIP NA15510 nsv1009955 1 143591673 143647231 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489668 M 29084 0 1 LOC100288142,NBPF12,PDE4DIP esv1010993 1 143592748 143631036 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564189 M 3 0 1 LOC100288142,NBPF12,PDE4DIP HuRef dgv319n100 1 143595594 143677383 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002034,nsv1001346,nsv1000251 M 29084 0 3 LOC100288142,NBPF12,PDE4DIP nsv8058 1 143597125 143601525 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22109,nssv18760 M 31 0 2 LOC100288142,NBPF12,PDE4DIP NA12802,NA19173 nsv821620 1 143597265 143807163 CNV loss Sebat_et_al_2004 15273396 ROMA nssv1421191 M 31 0 1 LOC100288142,NBPF12,PDE4DIP nsv1011358 1 143599238 143613095 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491135 M 29084 0 1 LOC100288142,NBPF12,PDE4DIP dgv320n100 1 143599238 143702635 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014504,nsv999753 M 29084 2 0 LOC100288142,NBPF12,PDE4DIP nsv1001908 1 143604763 143628352 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702094 M 29084 0 1 LOC100288142,NBPF12,PDE4DIP nsv1005055 1 143604763 144503409 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489862 M 29084 0 1 ANKRD34A,ANKRD35,CD160,GNRHR2,GPR89A,HFE2,ITGA10,LIX1L,LOC100288142,LOC101929780,MIR6736,NBPF12,NOTCH2NL,NUDT17,PDE4DIP,PDZK1,PEX11B,PIAS3,POLR3C,POLR3GL,RBM8A,RNF115,SEC22B,TXNIP esv1943257 1 143605271 143606661 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4759527 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 esv6817 1 143605384 143606731 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29258 M 1 0 0 LOC100288142,NBPF12,PDE4DIP dgv16n16 1 143606795 143619364 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436181,nsv435844 M 2 0 2 LOC100288142,NBPF12,PDE4DIP NA15510,NA18505 nsv1006036 1 143607054 143662326 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502026 M 29084 1 0 LOC100288142,NBPF12,PDE4DIP esv7067 1 143607406 143612530 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29508 M 1 0 0 LOC100288142,NBPF12,PDE4DIP esv2124797 1 143607486 143612540 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4913361 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 nsv498686 1 143607657 143618167 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585399 M 9 0 1 LOC100288142,NBPF12,PDE4DIP nsv946246 1 143608865 143612097 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790750,nssv1790766,nssv1790740,nssv1790782,nssv1790818,nssv1790762,nssv1790745,nssv1790807,nssv1790768,nssv1790808,nssv1790743,nssv1790771,nssv1790757,nssv1790780,nssv1790764,nssv1790805,nssv1790746,nssv1790775,nssv1790760,nssv1790803,nssv1790744,nssv1790776,nssv1790748,nssv1790799,nssv1790761,nssv1790786,nssv1790814,nssv1790800,nssv1790815,nssv1790785,nssv1790752,nssv1790739,nssv1790753,nssv1790787,nssv1790751,nssv1790773,nssv1790809,nssv1790784,nssv1790767,nssv1790796,nssv1790758,nssv1790798,nssv1790749,nssv1790802,nssv1790747,nssv1790781,nssv1790813,nssv1790806,nssv1790763,nssv1790783,nssv1790810,nssv1790788,nssv1790812,nssv1790794,nssv1790742,nssv1790765,nssv1790811,nssv1790769,nssv1790755,nssv1790797,nssv1790770,nssv1790778,nssv1790816,nssv1790801,nssv1790741,nssv1790791,nssv1790759,nssv1790792,nssv1790756,nssv1790777,nssv1790817,nssv1790795,nssv1790754,nssv1790789,nssv1790772,nssv1790793,nssv1790804,nssv1790790,nssv1790779,nssv1790774 M 97 10 0 LOC100288142,NBPF12,PDE4DIP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946248 1 143612097 143628093 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788228,nssv1788240,nssv1790826,nssv1788205,nssv1788167,nssv1788187,nssv1788163,nssv1788217,nssv1790825,nssv1788182,nssv1788232,nssv1788221,nssv1788162,nssv1788185,nssv1790823,nssv1788210,nssv1788174,nssv1788175,nssv1790821,nssv1788201,nssv1788235,nssv1788202,nssv1788158,nssv1788183,nssv1788168,nssv1788190,nssv1788229,nssv1788188,nssv1788177,nssv1788238,nssv1788226,nssv1788207,nssv1788161,nssv1788245,nssv1790824,nssv1788243,nssv1788157,nssv1788244,nssv1788178,nssv1788200,nssv1788231,nssv1790819,nssv1790820,nssv1788211,nssv1790822,nssv1788203,nssv1788233,nssv1788193,nssv1788230,nssv1788214,nssv1788234,nssv1788206,nssv1788173,nssv1788223,nssv1788166,nssv1788186,nssv1788160,nssv1788219,nssv1788165,nssv1788181,nssv1788159,nssv1788215,nssv1788164,nssv1788239,nssv1788169,nssv1788192,nssv1788180,nssv1788197,nssv1788170,nssv1788237,nssv1788227,nssv1788176,nssv1788171,nssv1788236,nssv1788195,nssv1788209,nssv1788224,nssv1788199,nssv1788172,nssv1788204,nssv1788220,nssv1788189,nssv1788242,nssv1788208,nssv1788198,nssv1788191,nssv1788241,nssv1788194,nssv1788218,nssv1788179,nssv1788212,nssv1788222,nssv1788184,nssv1788225,nssv1788213,nssv1788216,nssv1788196 M 97 10 0 LOC100288142,NBPF12,PDE4DIP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2191629 1 143612403 143618362 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4824147 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 esv8887 1 143612418 143618398 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31328 M 1 0 0 LOC100288142,NBPF12,PDE4DIP esv2455158 1 143619897 143697860 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5287830 M 1 1 0 LOC100288142,NBPF12,PDE4DIP NA18507 dgv321n100 1 143626159 143780663 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014405,nsv1013214 M 29084 2 0 LOC100288142,NBPF12,PDE4DIP nsv946249 1 143628093 143661820 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788249,nssv1788250,nssv1788253,nssv1788246,nssv1788252,nssv1789180,nssv1788248,nssv1788251,nssv1788255,nssv1788247,nssv1788254 M 97 10 0 LOC100288142,NBPF12,PDE4DIP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821349 1 143628110 143801719 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420591 M 1 1 0 LOC100288142,NBPF12,PDE4DIP NA10851 nsv824365 1 143628110 143801719 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434194,nssv1422389,nssv1426412,nssv1424765,nssv1433443,nssv1425524,nssv1437243,nssv1424275,nssv1432319,nssv1439479 M 31 10 0 LOC100288142,NBPF12,PDE4DIP AK2,AK4,AK6,NA18526,NA18537,NA18552,NA18570,NA18947,NA18949,NA18972 esv32934 1 143631375 143791172 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93925,essv100726 M 51 1 1 LOC100288142,NBPF12,PDE4DIP 21634,21656 esv3387252 1 143634752 143804350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691909 M 185 1 0 LOC100288142,NBPF12,PDE4DIP NA12878 esv2762189 1 143657094 143726347 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006206 M 1109 1 0 LOC100288142,NBPF12,PDE4DIP RW_0546 esv27392 1 143659640 143795351 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19656 M 40 23 0 LOC100288142,NBPF12,PDE4DIP NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12239,NA12287,NA12414,NA12749,NA12776,NA12878,NA15510,NA18505,NA18508,NA18517,NA18523,NA19099,NA19147,NA19225 nsv8069 1 143659740 143792408 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16765,nssv19436,nssv24275,nssv16415,nssv17411,nssv18769,nssv18067,nssv19412,nssv20087,nssv26188,nssv20748,nssv17752,nssv18423,nssv20078 M 31 14 0 LOC100288142,NBPF12,PDE4DIP NA07029,NA07048,NA10839,NA10847,NA11830,NA12155,NA12872,NA18563,NA18564,NA18572,NA18942,NA18972,NA18980,NA19007 dgv322n100 1 143660313 143752410 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005180,nsv1004249 M 29084 0 2 LOC100288142,NBPF12,PDE4DIP dgv323n100 1 143660313 143791396 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997469,nsv1007674,nsv999681,nsv1012604,nsv998368 M 29084 5 0 LOC100288142,NBPF12,PDE4DIP dgv70n67 1 143660424 143792326 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824398,nsv824409,nsv824431,nsv824387,nsv824376,nsv824420 M 31 20 0 LOC100288142,NBPF12,PDE4DIP AK10,AK12,AK14,AK16,AK18,AK20,AK8,NA18542,NA18547,NA18564,NA18566,NA18582,NA18592,NA18942,NA18951,NA18968,NA18969,NA18973,NA18997,NA18999 dgv324n100 1 143661320 143864102 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004608,nsv1009656,nsv1005041,nsv1012811 M 29084 5 0 LOC100288142,NBPF12,PDE4DIP,SEC22B dgv325n100 1 143661320 144001649 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001648,nsv1010311,nsv1012982,nsv1000851,nsv1000018,nsv1000202,nsv997316,nsv1014270 M 29084 8 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL,PDE4DIP,SEC22B nsv1003688 1 143661320 144109536 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486494 M 29084 1 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL,PDE4DIP,SEC22B nsv158975 1 143661619 143661619 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177553 M 24 LOC100288142,NBPF12,PDE4DIP esv3380599 1 143661752 143665450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691910 M 185 1 0 LOC100288142,NBPF12,PDE4DIP NA19238 nsv946250 1 143663799 143751419 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789184,nssv1789222,nssv1789188,nssv1789227,nssv1789187,nssv1789216,nssv1789183,nssv1789225,nssv1789190,nssv1789214,nssv1789196,nssv1789219,nssv1789220,nssv1789212,nssv1789205,nssv1789210,nssv1789228,nssv1789209,nssv1789206,nssv1789208,nssv1789218,nssv1789223,nssv1789192,nssv1789199,nssv1789201,nssv1789194,nssv1789204,nssv1789213,nssv1789203,nssv1789202,nssv1789186,nssv1789211,nssv1789226,nssv1789191,nssv1789181,nssv1789221,nssv1789185,nssv1789215,nssv1789182,nssv1789197,nssv1789207,nssv1789217,nssv1789189,nssv1789198,nssv1789195,nssv1789193,nssv1789224,nssv1789200 M 97 10 0 LOC100288142,NBPF12,PDE4DIP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv819024 1 143665704 143791860 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418779 M 2 1 0 LOC100288142,NBPF12,PDE4DIP AK1 esv7052 1 143665712 143666778 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29493 M 1 0 0 LOC100288142,NBPF12,PDE4DIP esv2391656 1 143665774 143666783 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4840625 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 dgv199e59 1 143666652 143672950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3325053,esv3384829 M 185 2 0 LOC100288142,NBPF12,PDE4DIP NA12891,NA19238 esv3360116 1 143666652 143689450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691913 M 185 1 0 LOC100288142,NBPF12,PDE4DIP NA19240 esv2761299 1 143669045 144078052 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6995722,essv6995733,essv6995711 M 1109 2 1 LOC100288142,LOC101929780,NBPF12,NOTCH2NL,PDE4DIP,SEC22B SW_0060,SW_0855,SW_1439 nsv998746 1 143669045 145282510 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702100 M 29084 1 0 ANKRD34A,ANKRD35,CD160,CHD1L,FMO5,GNRHR2,GPR89A,GPR89C,HFE2,ITGA10,LIX1L,LOC100288142,LOC101929780,LOC728989,MIR6736,NBPF11,NBPF12,NBPF13P,NBPF24,NOTCH2NL,NUDT17,PDE4DIP,PDIA3P1,PDZK1,PDZK1P1,PEX11B,PIAS3,POLR3C,POLR3GL,PRKAB2,RBM8A,RNF115,SEC22B,TXNIP nsv514005 1 143670880 143792368 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2846514,nssv2846567,nssv2849280,nssv2849269,nssv2846612,nssv2849310,nssv2846533,nssv2846588,nssv2849297,nssv2848403,nssv2846544,nssv2846599,nssv2849325,nssv2849372,nssv2849270,nssv2848468,nssv2849259,nssv2849324,nssv2848435,nssv2846644,nssv2846581,nssv2848404,nssv2849276,nssv2849336,nssv2848455,nssv2846538,nssv2848419,nssv2848452,nssv2849301,nssv2846519,nssv2848471,nssv2849274,nssv2846574,nssv2846632,nssv2849257,nssv2846552,nssv2849295,nssv2846550,nssv2848426,nssv2848415,nssv2849249,nssv2849273,nssv2848420,nssv2846600,nssv2846646,nssv2849279,nssv2848484,nssv2849292,nssv2846587,nssv2846557,nssv2848429,nssv2849290,nssv2846615,nssv2846516,nssv2848448,nssv2849349,nssv2849313,nssv2848486,nssv2849315,nssv2846541,nssv2846589,nssv2846601,nssv2846649,nssv2846607,nssv2846636,nssv2849253,nssv2849252,nssv2846545,nssv2846617,nssv2849286,nssv2848466,nssv2849277,nssv2849261,nssv2848428,nssv2849361,nssv2846526,nssv2848424,nssv2848407,nssv2849241,nssv2846569,nssv2849293,nssv2848433,nssv2846613,nssv2849245,nssv2846573,nssv2846651,nssv2848480,nssv2848473,nssv2848449,nssv2846537,nssv2846556,nssv2849327,nssv2846643,nssv2848472,nssv2848450,nssv2848445,nssv2846610,nssv2848432,nssv2849366,nssv2849311,nssv2849302,nssv2848421,nssv2849369,nssv2849237,nssv2848436,nssv2849362,nssv2846579,nssv2849334,nssv2846616,nssv2848491,nssv2849304,nssv2848470,nssv2846596,nssv2846629,nssv2846641,nssv2846626,nssv2846555,nssv2846565,nssv2846645,nssv2848411,nssv2846592,nssv2849360,nssv2849305,nssv2849282,nssv2846624,nssv2848479,nssv2849234,nssv2848483,nssv2848465,nssv2846518,nssv2846540,nssv2849337,nssv2848456,nssv2846524,nssv2848416,nssv2846627,nssv2849309,nssv2849275,nssv2846652,nssv2849260,nssv2848441,nssv2849271,nssv2848430,nssv2848476,nssv2849330,nssv2846622,nssv2846598,nssv2849343,nssv2846551,nssv2846638,nssv2849268,nssv2849329,nssv2849354,nssv2849287,nssv2846571,nssv2846591,nssv2848410,nssv2849242,nssv2846563,nssv2849289,nssv2849344,nssv2849340,nssv2849331,nssv2848440,nssv2848477,nssv2846630,nssv2846639,nssv2846546,nssv2849288,nssv2848454,nssv2846532,nssv2846554,nssv2848459,nssv2849285,nssv2848482,nssv2849243,nssv2849283,nssv2849266,nssv2849284,nssv2849359,nssv2846625,nssv2846633,nssv2848493,nssv2849250,nssv2846605,nssv2846553,nssv2849338,nssv2849255,nssv2848475,nssv2846547,nssv2849320,nssv2849355,nssv2846543,nssv2846580,nssv2849258,nssv2849256,nssv2848467,nssv2849263,nssv2848438,nssv2848409,nssv2846528,nssv2848474,nssv2849370,nssv2849244,nssv2846621,nssv2846531,nssv2846586,nssv2849356,nssv2849248,nssv2849322,nssv2846618,nssv2849306,nssv2846521,nssv2848487,nssv2849367,nssv2849278,nssv2849328,nssv2849332,nssv2846525,nssv2849300,nssv2849291,nssv2848434,nssv2849347,nssv2846583,nssv2849308,nssv2846534,nssv2846530,nssv2848462,nssv2846584,nssv2848457,nssv2849247,nssv2848461,nssv2846623,nssv2846635,nssv2848464,nssv2846575,nssv2849323,nssv2846628,nssv2849254,nssv2849317,nssv2849358,nssv2846520,nssv2849318,nssv2849368,nssv2846558,nssv2849264,nssv2849350,nssv2848451,nssv2846535,nssv2846522,nssv2846642,nssv2849281,nssv2848437,nssv2848439,nssv2848460,nssv2848402,nssv2846559,nssv2848422,nssv2846609,nssv2849352,nssv2846594,nssv2846595,nssv2849233,nssv2848414,nssv2849335,nssv2848489,nssv2849326,nssv2849265,nssv2848431,nssv2848488,nssv2846654,nssv2846511,nssv2848458,nssv2846527,nssv2849314,nssv2846512,nssv2846597,nssv2849236,nssv2849353,nssv2849348,nssv2846561,nssv2848492,nssv2846582,nssv2848418,nssv2848413,nssv2846640,nssv2848427,nssv2846647,nssv2849298,nssv2848463,nssv2849235,nssv2848406,nssv2846572,nssv2846650,nssv2846611,nssv2846517,nssv2848453,nssv2846529,nssv2849371,nssv2846568,nssv2849363,nssv2848481,nssv2846606,nssv2846560,nssv2846631,nssv2849341,nssv2849339,nssv2848490,nssv2846619,nssv2846578,nssv2849333,nssv2846604,nssv2849251,nssv2848469,nssv2848443,nssv2846576,nssv2849299,nssv2846614,nssv2848408,nssv2846564,nssv2846602,nssv2846513,nssv2849321,nssv2846548,nssv2849307,nssv2846585,nssv2848494,nssv2849239,nssv2849345,nssv2849364,nssv2849272,nssv2848425,nssv2849351,nssv2846593,nssv2849262,nssv2849267,nssv2846620,nssv2849357,nssv2846562,nssv2846515,nssv2846608,nssv2849246,nssv2846648,nssv2849296,nssv2848405,nssv2848478,nssv2849342,nssv2849365,nssv2846549,nssv2848442,nssv2849312,nssv2848412,nssv2846637,nssv2848401,nssv2849319,nssv2846590,nssv2848447,nssv2849294,nssv2848446,nssv2846566,nssv2846570,nssv2846539,nssv2848444,nssv2846542,nssv2846653,nssv2848485,nssv2849316,nssv2849303,nssv2846523,nssv2849240,nssv2846634,nssv2846603,nssv2848423,nssv2846577,nssv2849238,nssv2849346,nssv2848417,nssv2846536 M 2366 378 0 LOC100288142,NBPF12,PDE4DIP NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10843,NA10845,NA10846,NA10847,NA10850,NA10852,NA10855,NA10856,NA10857,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11918,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12386,NA12399,NA12400,NA12414,NA12485,NA12546,NA12716,NA12717,NA12718,NA12748,NA12749,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12829,NA12830,NA12832,NA12842,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18485,NA18486,NA18487,NA18489,NA18497,NA18498,NA18500,NA18503,NA18504,NA18507,NA18508,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18854,NA18855,NA18856,NA18857,NA18861,NA18871,NA18873,NA18908,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19095,NA19096,NA19097,NA19098,NA19099,NA19107,NA19114,NA19116,NA19117,NA19119,NA19120,NA19122,NA19123,NA19127,NA19130,NA19131,NA19132,NA19137,NA19140,NA19141,NA19142,NA19143,NA19146,NA19147,NA19148,NA19152,NA19153,NA19154,NA19175,NA19177,NA19178,NA19180,NA19184,NA19185,NA19186,NA19189,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19207,NA19209,NA19210,NA19211,NA19224,NA19225,NA19235,NA19239,NA19240,NA19248,NA19249,NA19256,NA19258,NA21302,NA21303,NA21313,NA21316,NA21317,NA21359,NA21362,NA21363,NA21365,NA21366,NA21381,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21404,NA21423,NA21425,NA21438,NA21439,NA21441,NA21447,NA21453,NA21454,NA21455,NA21476,NA21477,NA21478,NA21480,NA21485,NA21487,NA21488,NA21489,NA21490,NA21493,NA21512,NA21513,NA21514,NA21523,NA21526,NA21581,NA21583,NA21600,NA21608,NA21614,NA21615,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 dgv200e59 1 143673452 143805450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3386293,esv3414546,esv3351074,esv3371816,esv3432491 M 185 5 0 LOC100288142,NBPF12,PDE4DIP NA12891,NA12892,NA19238,NA19239,NA19240 esv3414198 1 143673552 143678150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691915 M 185 1 0 LOC100288142,NBPF12,PDE4DIP NA19238 nsv831326 1 143673834 143791318 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449673,nssv1449651,nssv1449684,nssv1449662,nssv1449695 M 95 0 5 LOC100288142,NBPF12,PDE4DIP esv3368223 1 143678652 143690150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691916 M 185 1 0 LOC100288142,NBPF12,PDE4DIP NA19238 esv3352814 1 143690652 143692950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691920 M 185 1 0 LOC100288142,NBPF12,PDE4DIP NA19238 esv2431887 1 143697860 143802318 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5336045 M 1 1 0 LOC100288142,NBPF12,PDE4DIP NA18507 nsv999288 1 143702635 143780663 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500047 M 29084 0 1 LOC100288142,NBPF12,PDE4DIP dgv326n100 1 143706287 143825211 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014390,nsv1010065,nsv1000151 M 29084 3 0 LOC100288142,NBPF12,PDE4DIP,SEC22B esv6514 1 143717042 143717238 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28955 M 1 0 0 LOC100288142,NBPF12,PDE4DIP esv1942033 1 143728575 143728994 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4685536 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 esv3361392 1 143729180 143729180 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8822977 M 185 1 0 LOC100288142,NBPF12,PDE4DIP NA12878 dgv327n100 1 143735140 144118144 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002736,nsv998789 M 29084 2 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL,PDE4DIP,SEC22B nsv511712 1 143737301 143738734 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626353 M 1 0 1 LOC100288142,NBPF12,PDE4DIP 1 esv2582001 1 143737507 143738937 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5327740 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 esv6218 1 143737825 143738680 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28659 M 1 0 0 LOC100288142,NBPF12,PDE4DIP esv1963892 1 143737899 143738611 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4835846 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 esv1004968 1 143738093 143738415 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572301 M 3 0 1 LOC100288142,NBPF12,PDE4DIP HuRef esv2649952 1 143738101 143738423 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5175451 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 nsv946251 1 143752011 143754258 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789231,nssv1789264,nssv1789243,nssv1789294,nssv1789307,nssv1789286,nssv1789247,nssv1789255,nssv1789237,nssv1789285,nssv1789233,nssv1789290,nssv1789251,nssv1789282,nssv1789239,nssv1789289,nssv1789232,nssv1789275,nssv1789235,nssv1789280,nssv1789305,nssv1789295,nssv1789302,nssv1789266,nssv1789248,nssv1789276,nssv1789300,nssv1789298,nssv1789230,nssv1789288,nssv1789236,nssv1789292,nssv1789303,nssv1789262,nssv1789306,nssv1789269,nssv1789254,nssv1789297,nssv1789304,nssv1789293,nssv1789240,nssv1789278,nssv1789250,nssv1789279,nssv1789260,nssv1789284,nssv1789301,nssv1789271,nssv1789299,nssv1789229,nssv1789241,nssv1789281,nssv1789238,nssv1789256,nssv1789244,nssv1789274,nssv1789308,nssv1789296,nssv1789257,nssv1789272,nssv1789242,nssv1789261,nssv1789253,nssv1789263,nssv1789245,nssv1789283,nssv1789234,nssv1789252,nssv1789258,nssv1789291,nssv1789249,nssv1789259,nssv1789246,nssv1789265,nssv1789267,nssv1789277,nssv1789287,nssv1789268,nssv1789273,nssv1789270 M 97 10 0 LOC100288142,NBPF12,PDE4DIP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv9122 1 143754666 143754834 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31563 M 1 0 0 LOC100288142,NBPF12,PDE4DIP nsv946252 1 143765478 143774583 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789316,nssv1789343,nssv1789318,nssv1789331,nssv1789312,nssv1789328,nssv1789311,nssv1789321,nssv1789315,nssv1789313,nssv1789323,nssv1789324,nssv1789353,nssv1789348,nssv1789338,nssv1789340,nssv1789347,nssv1789333,nssv1789344,nssv1789346,nssv1789355,nssv1789356,nssv1789320,nssv1789327,nssv1789352,nssv1789334,nssv1789350,nssv1789337,nssv1789336,nssv1789326,nssv1789351,nssv1789342,nssv1789329,nssv1789322,nssv1789314,nssv1789339,nssv1789332,nssv1789319,nssv1789354,nssv1789330,nssv1789341,nssv1789309,nssv1789349,nssv1789345,nssv1789310,nssv1789317,nssv1789325,nssv1789335 M 97 10 0 LOC100288142,NBPF12,PDE4DIP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv7886 1 143772992 143773206 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30327 M 1 0 0 LOC100288142,NBPF12,PDE4DIP nsv946253 1 143774583 143804020 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789358,nssv1789420,nssv1789428,nssv1789401,nssv1789369,nssv1789398,nssv1789375,nssv1789405,nssv1789379,nssv1789396,nssv1789361,nssv1789383,nssv1789371,nssv1789391,nssv1789363,nssv1789414,nssv1789433,nssv1789393,nssv1789368,nssv1789417,nssv1789365,nssv1789418,nssv1789367,nssv1789423,nssv1789364,nssv1789394,nssv1789431,nssv1789408,nssv1789366,nssv1789403,nssv1789432,nssv1789410,nssv1789376,nssv1789416,nssv1789388,nssv1789426,nssv1789382,nssv1789384,nssv1789370,nssv1789424,nssv1789360,nssv1789422,nssv1789435,nssv1789390,nssv1789427,nssv1789397,nssv1789429,nssv1789425,nssv1789386,nssv1789404,nssv1789372,nssv1789389,nssv1789359,nssv1789421,nssv1789430,nssv1789399,nssv1789381,nssv1789412,nssv1789434,nssv1789406,nssv1789378,nssv1789407,nssv1789385,nssv1789413,nssv1789436,nssv1789409,nssv1789373,nssv1789419,nssv1789377,nssv1789411,nssv1789374,nssv1789380,nssv1789362,nssv1789392,nssv1789402,nssv1789395,nssv1789387,nssv1789357,nssv1789400,nssv1789415 M 97 10 0 LOC100288142,NBPF12,PDE4DIP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2522501 1 143781691 143783168 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5163365 M 1 0 1 LOC100288142,NBPF12,PDE4DIP NA18507 nsv2644 1 143782866 143819653 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5855,nssv6920,nssv1422,nssv2350,nssv3188 M 9 0 5 LOC100288142,NBPF12,PDE4DIP,SEC22B NA12156,NA12878,NA18555,NA19129,NA19240 dgv17n16 1 143790285 143903675 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436262,nsv435903 M 2 0 2 LOC100288142,NBPF12,SEC22B NA15510,NA18505 dgv328n100 1 143791341 144001649 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013404,nsv1001969 M 29084 2 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL,SEC22B esv2593580 1 143802318 143809622 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5341607 M 1 1 0 LOC100288142,NBPF12,SEC22B NA18507 dgv18n16 1 143802497 143808992 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv435750,nsv436218 M 2 0 2 LOC100288142,NBPF12,SEC22B NA15510,NA18505 esv2548575 1 143803776 143809166 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5285972 M 1 0 1 LOC100288142,NBPF12,SEC22B NA18507 esv5594 1 143804075 143808689 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28035 M 1 0 0 LOC100288142,NBPF12,SEC22B esv2229660 1 143804130 143808633 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4895416 M 1 0 1 LOC100288142,NBPF12,SEC22B NA18507 dgv7e180 1 143804138 143808481 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1003476,esv995844 M 3 0 1 LOC100288142,NBPF12,SEC22B HuRef nsv511713 1 143804190 143808468 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626355 M 1 0 1 LOC100288142,NBPF12,SEC22B 1 nsv161167 1 143804306 143808439 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179745 M 24 LOC100288142,NBPF12,SEC22B esv2460355 1 143806690 143831591 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5374595 M 1 0 0 LOC100288142,NBPF12,SEC22B NA18507 nsv946254 1 143808265 143847580 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790127,nssv1790108,nssv1789444,nssv1789483,nssv1789449,nssv1790120,nssv1789466,nssv1789485,nssv1789438,nssv1789460,nssv1789458,nssv1790111,nssv1790128,nssv1790107,nssv1789455,nssv1789467,nssv1789441,nssv1789487,nssv1789459,nssv1790113,nssv1789468,nssv1789478,nssv1789446,nssv1789481,nssv1789445,nssv1789475,nssv1789447,nssv1790114,nssv1790129,nssv1789474,nssv1790131,nssv1790104,nssv1789456,nssv1789476,nssv1789440,nssv1789473,nssv1790124,nssv1790121,nssv1790126,nssv1790122,nssv1790132,nssv1789463,nssv1789451,nssv1790110,nssv1789443,nssv1789471,nssv1789442,nssv1789437,nssv1789462,nssv1790117,nssv1789448,nssv1790118,nssv1790123,nssv1789480,nssv1790125,nssv1790116,nssv1789461,nssv1790119,nssv1789454,nssv1790106,nssv1789453,nssv1789484,nssv1790130,nssv1789469,nssv1789457,nssv1789464,nssv1789439,nssv1789477,nssv1789452,nssv1789486,nssv1789450,nssv1789479,nssv1789465,nssv1789470,nssv1790105,nssv1789482,nssv1789472,nssv1790112,nssv1790115,nssv1790109 M 97 10 0 LOC100288142,NBPF12,SEC22B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3355910 1 143809589 143809608 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678334,essv8678335 M 185 2 0 LOC100288142,NBPF12,SEC22B NA12878,NA19240 esv3309997 1 143809598 143809599 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843193,essv7839861,essv7841742,essv7841073 M 185 4 0 LOC100288142,NBPF12,SEC22B NA12878,NA12892,NA19239,NA19240 esv3304560 1 143809602 143809603 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7761923,essv7742818,essv7754127,essv7759465,essv7744685,essv7757050,essv7755902,essv7751731,essv7756342,essv7762963,essv7745988,essv7744017,essv7756500,essv7758062,essv7750367,essv7758174,essv7756210,essv7751552,essv7746334,essv7762305,essv7754456,essv7752418,essv7741299,essv7741901,essv7746809,essv7757698,essv7743306,essv7753736,essv7752988,essv7745609,essv7751990,essv7760817,essv7751307 M 185 33 0 LOC100288142,NBPF12,SEC22B NA11829,NA11881,NA11992,NA12003,NA12249,NA12716,NA12717,NA12761,NA12828,NA12878,NA12892,NA18489,NA18505,NA18507,NA18510,NA18522,NA18555,NA18570,NA18572,NA18638,NA18853,NA18858,NA18870,NA18912,NA18916,NA18949,NA19005,NA19102,NA19138,NA19190,NA19210,NA19239,NA19240 esv3413349 1 143809602 143809614 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673763,essv8673764,essv8673767,essv8673766 M 185 4 0 LOC100288142,NBPF12,SEC22B NA12878,NA12892,NA19239,NA19240 esv3405247 1 143809603 143809611 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901327,essv8901340,essv8901315,essv8901317,essv8901326,essv8901319,essv8901343,essv8901341,essv8901324,essv8901321,essv8901330,essv8901342,essv8901329,essv8901344,essv8901328,essv8901335,essv8901331,essv8901338,essv8901323,essv8901334,essv8901339,essv8901333,essv8901345,essv8901313,essv8901320,essv8901322,essv8901318,essv8901316,essv8901332 M 185 29 0 LOC100288142,NBPF12,SEC22B NA11829,NA11881,NA11992,NA12003,NA12249,NA12716,NA12717,NA12761,NA12828,NA18489,NA18505,NA18507,NA18510,NA18522,NA18555,NA18570,NA18572,NA18638,NA18853,NA18858,NA18870,NA18912,NA18916,NA18949,NA19005,NA19102,NA19138,NA19190,NA19210 esv2581967 1 143809622 143830894 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5164878 M 1 1 0 LOC100288142,NBPF12,SEC22B NA18507 esv2509949 1 143824857 143826184 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5169038 M 1 0 1 LOC100288142,NBPF12,SEC22B NA18507 nsv1008368 1 143835838 143864102 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495916 M 29084 1 0 LOC100288142,NBPF12 nsv498687 1 143836169 143894728 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585400 M 9 0 1 LOC100288142,NBPF12 nsv946255 1 143847580 143850876 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790136,nssv1790137,nssv1790139,nssv1790133,nssv1790140,nssv1790143,nssv1790135,nssv1790138,nssv1790142,nssv1790141,nssv1790134 M 97 10 0 LOC100288142,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946256 1 143850876 143916655 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790149,nssv1790170,nssv1790150,nssv1790200,nssv1790165,nssv1790176,nssv1790159,nssv1790203,nssv1790175,nssv1790194,nssv1790173,nssv1790211,nssv1790162,nssv1788468,nssv1790148,nssv1790198,nssv1788475,nssv1790199,nssv1790147,nssv1790206,nssv1790157,nssv1790182,nssv1790156,nssv1790183,nssv1790166,nssv1788467,nssv1790169,nssv1790188,nssv1788478,nssv1790202,nssv1790145,nssv1790192,nssv1788469,nssv1790185,nssv1790152,nssv1790190,nssv1788471,nssv1790204,nssv1790154,nssv1790205,nssv1790158,nssv1790195,nssv1788473,nssv1790181,nssv1790163,nssv1790144,nssv1790172,nssv1790178,nssv1790155,nssv1790180,nssv1788476,nssv1790207,nssv1790168,nssv1790208,nssv1790151,nssv1790210,nssv1788472,nssv1790197,nssv1788477,nssv1790191,nssv1790153,nssv1790189,nssv1790146,nssv1790209,nssv1788474,nssv1790201,nssv1788470,nssv1790186,nssv1790164,nssv1790184,nssv1790160,nssv1790171,nssv1790161,nssv1790174,nssv1790187,nssv1790193,nssv1790179,nssv1790196,nssv1790167,nssv1790177 M 97 10 0 LOC100288142,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv469755 1 143852298 143999773 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1672833,nssv1674676,nssv1674888,nssv1674390,nssv1672921,nssv1674264,nssv1676492,nssv1674448,nssv1674829,nssv1674681,nssv1672745,nssv1672767,nssv1676522,nssv1672411,nssv1673595,nssv1673169,nssv1675571,nssv1672510,nssv1676131,nssv1676626,nssv1672509,nssv1674021,nssv1672695,nssv1674505,nssv1675182 M 265 0 25 LOC100288142,NBPF12,NOTCH2NL esv24917 1 143854096 143854729 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12446 M 40 0 7 LOC100288142,NBPF12 NA07045,NA11894,NA12004,NA12239,NA12749,NA12776,NA12878 nsv547652 1 143854121 143854661 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723059,nssv723056,nssv723057,nssv723058 M 17421 0 4 LOC100288142,NBPF12 nsv547653 1 143854121 143880697 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723060 M 17421 0 1 LOC100288142,NBPF12 dgv201e59 1 143854952 144010050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3390875,esv3380232 M 185 2 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL NA12891,NA12892 nsv437982 1 143864903 143883975 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468075,nssv468063 M 269 0 2 LOC100288142,NBPF12 NA12802,NA12814 nsv999457 1 143867646 144001649 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500251 M 29084 1 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL nsv8080 1 143889163 143890336 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17736 M 31 1 0 LOC100288142,NBPF12 NA10863 nsv8091 1 143900476 144084004 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv23706,nssv17750,nssv18091,nssv18765,nssv22439,nssv24007,nssv18082,nssv22752,nssv18427,nssv17095,nssv19753,nssv20072,nssv16745,nssv26394,nssv24565,nssv19099,nssv20408,nssv17741,nssv17754,nssv18766,nssv18753,nssv17425,nssv20738,nssv21078,nssv19742 M 31 21 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL NA07029,NA07048,NA10839,NA10847,NA11830,NA12155,NA12872,NA18504,NA18517,NA18537,NA18552,NA18564,NA18572,NA18853,NA18942,NA18972,NA18975,NA18980,NA19173,NA19221,NA19240 nsv831337 1 143900677 144104827 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449751,nssv1449717,nssv1449706,nssv1449728,nssv1449740 M 95 0 5 LOC100288142,LOC101929780,NBPF12,NOTCH2NL nsv820512 1 143900933 144003232 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420602 M 1 1 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL NA10851 nsv946750 1 143912514 143913903 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583418,nssv2583412,nssv2583417,nssv2583413,nssv2583410,nssv2583409,nssv2583411,nssv2583408,nssv2583415,nssv2583416,nssv2583414 M 97 10 0 LOC100288142,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946257 1 143916655 143921515 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788485,nssv1788506,nssv1788488,nssv1788507,nssv1788486,nssv1788489,nssv1788482,nssv1788516,nssv1788481,nssv1788517,nssv1788497,nssv1788524,nssv1788510,nssv1788501,nssv1788499,nssv1788480,nssv1788521,nssv1788514,nssv1788504,nssv1788525,nssv1788526,nssv1788513,nssv1788492,nssv1788515,nssv1788483,nssv1788520,nssv1788502,nssv1788508,nssv1788523,nssv1788503,nssv1788487,nssv1788519,nssv1788498,nssv1788518,nssv1788511,nssv1788509,nssv1788495,nssv1788490,nssv1788496,nssv1788493,nssv1788522,nssv1788500,nssv1788505,nssv1788479,nssv1788491,nssv1788484,nssv1788494,nssv1788512 M 97 10 0 LOC100288142,NBPF12,NOTCH2NL HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946259 1 143921515 144001137 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788536,nssv1789507,nssv1788556,nssv1788550,nssv1788529,nssv1789510,nssv1788545,nssv1789512,nssv1788531,nssv1789495,nssv1788541,nssv1789489,nssv1788542,nssv1789513,nssv1789522,nssv1789505,nssv1788540,nssv1788557,nssv1788546,nssv1789492,nssv1789527,nssv1789501,nssv1788558,nssv1789499,nssv1789524,nssv1789490,nssv1789525,nssv1789511,nssv1789523,nssv1789494,nssv1789521,nssv1789517,nssv1789526,nssv1789502,nssv1788530,nssv1789508,nssv1788539,nssv1788553,nssv1788537,nssv1788562,nssv1788551,nssv1789504,nssv1788552,nssv1789488,nssv1788555,nssv1789497,nssv1788533,nssv1789520,nssv1788538,nssv1789514,nssv1788543,nssv1789498,nssv1788535,nssv1789516,nssv1788549,nssv1788560,nssv1789528,nssv1789519,nssv1788544,nssv1789515,nssv1788547,nssv1789506,nssv1789530,nssv1789493,nssv1789529,nssv1789500,nssv1788532,nssv1789518,nssv1788534,nssv1788559,nssv1788548,nssv1788527,nssv1788528,nssv1788554,nssv1789491,nssv1789503,nssv1789496,nssv1788561,nssv1789509,nssv1788563 M 97 10 0 LOC100288142,LOC101929780,NBPF12,NOTCH2NL HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831348 1 143921702 144020182 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449784,nssv1449773,nssv1449762 M 95 0 3 LOC100288142,LOC101929780,NBPF12,NOTCH2NL esv3349227 1 143922670 143922689 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596346 M 185 1 0 LOC100288142,NBPF12,NOTCH2NL NA19141 nsv824453 1 143923747 143963497 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1427283 M 31 1 0 LOC100288142,NBPF12,NOTCH2NL AK8 nsv2677 1 143972032 144104025 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3215,nssv11021,nssv9590,nssv3206,nssv1441,nssv5871,nssv2388,nssv2379,nssv9330,nssv10233 M 9 0 8 LOC100288142,LOC101929780,NBPF12,NOTCH2NL NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv946751 1 143974438 143974938 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583488,nssv2583451,nssv2583453,nssv2583422,nssv2583464,nssv2584735,nssv2583481,nssv2584732,nssv2583467,nssv2583427,nssv2583479,nssv2583440,nssv2583461,nssv2583435,nssv2583456,nssv2583448,nssv2583458,nssv2583426,nssv2583469,nssv2583441,nssv2583455,nssv2583438,nssv2583445,nssv2583434,nssv2583482,nssv2583430,nssv2583468,nssv2583444,nssv2583462,nssv2583425,nssv2583485,nssv2583423,nssv2583476,nssv2583450,nssv2583471,nssv2584737,nssv2583419,nssv2583421,nssv2583486,nssv2583431,nssv2583477,nssv2583490,nssv2583463,nssv2583428,nssv2583465,nssv2583491,nssv2583457,nssv2583429,nssv2583478,nssv2583447,nssv2583460,nssv2583432,nssv2583446,nssv2583443,nssv2583466,nssv2583439,nssv2583474,nssv2584734,nssv2583472,nssv2583436,nssv2583484,nssv2583420,nssv2583473,nssv2584736,nssv2583449,nssv2583424,nssv2583442,nssv2584733,nssv2583452,nssv2583489,nssv2583470,nssv2583433,nssv2583483,nssv2583437,nssv2583487,nssv2584731,nssv2583459,nssv2583475,nssv2583480,nssv2583454 M 97 10 0 LOC100288142,NBPF12,NOTCH2NL HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2762190 1 143987628 144022893 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006207 M 1109 0 1 LOC100288142,LOC101929780,NBPF12,NOTCH2NL RW_0543 nsv508582 1 143996560 144098718 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618988 M 4 0 1 LOC100288142,LOC101929780,NBPF12,NOTCH2NL NA10860 nsv831359 1 144002313 144162829 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449795,nssv1449817,nssv1449806 M 95 0 3 HFE2,LOC100288142,LOC101929780,NBPF12,TXNIP nsv946753 1 144002545 144004214 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584787,nssv2580568,nssv2584783,nssv2580584,nssv2580609,nssv2580586,nssv2584778,nssv2580567,nssv2580610,nssv2580595,nssv2580605,nssv2580578,nssv2584796,nssv2580596,nssv2580613,nssv2580573,nssv2584788,nssv2580581,nssv2584793,nssv2580591,nssv2584790,nssv2580557,nssv2580604,nssv2580599,nssv2584791,nssv2580592,nssv2580612,nssv2580574,nssv2584795,nssv2580566,nssv2584784,nssv2580597,nssv2584789,nssv2580589,nssv2580558,nssv2580602,nssv2580565,nssv2580583,nssv2584781,nssv2580575,nssv2580562,nssv2580585,nssv2584792,nssv2580561,nssv2584782,nssv2580593,nssv2580607,nssv2580603,nssv2584785,nssv2580580,nssv2584777,nssv2580598,nssv2584779,nssv2580569,nssv2584780,nssv2580587,nssv2584797,nssv2580564,nssv2580608,nssv2580571,nssv2584776,nssv2580588,nssv2580559,nssv2580577,nssv2584794,nssv2580600,nssv2580563,nssv2580560,nssv2580606,nssv2584775,nssv2580611,nssv2580601,nssv2584786,nssv2580590,nssv2580570,nssv2580594,nssv2580572,nssv2580579,nssv2580576,nssv2580582 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2125426 1 144003050 144003462 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4737332 M 1 0 1 LOC100288142,LOC101929780,NBPF12 NA18507 nsv160157 1 144003200 144003312 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178735 M 24 LOC100288142,LOC101929780,NBPF12 nsv946754 1 144004214 144021122 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2580628,nssv2580666,nssv2580622,nssv2580662,nssv2580688,nssv2580675,nssv2580691,nssv2580661,nssv2580625,nssv2580683,nssv2580645,nssv2580659,nssv2580615,nssv2580667,nssv2580634,nssv2580655,nssv2580616,nssv2580650,nssv2580687,nssv2580660,nssv2580626,nssv2580669,nssv2580624,nssv2580647,nssv2580643,nssv2580614,nssv2580623,nssv2580670,nssv2580629,nssv2580651,nssv2580621,nssv2580681,nssv2580632,nssv2580657,nssv2580631,nssv2580637,nssv2580685,nssv2580682,nssv2580692,nssv2580672,nssv2580686,nssv2580649,nssv2580684,nssv2580676,nssv2580638,nssv2580646,nssv2580618,nssv2580653,nssv2580630,nssv2580678,nssv2580635,nssv2580673,nssv2580627,nssv2580648,nssv2580642,nssv2580677,nssv2580636,nssv2580664,nssv2580690,nssv2580644,nssv2580633,nssv2580671,nssv2580689,nssv2580658,nssv2580639,nssv2580654,nssv2580620,nssv2580668,nssv2580693,nssv2580665,nssv2580619,nssv2580679,nssv2580617,nssv2580674,nssv2580656,nssv2580652,nssv2580663,nssv2580641,nssv2580640,nssv2580680 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv435814 1 144005845 144011561 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465776 M 2 0 1 LOC100288142,LOC101929780,NBPF12 NA15510 nsv433348 1 144005888 144097032 CNV gain Cooper_et_al_2008 18776910 SNP array nssv463229 M 9 1 0 LOC100288142,LOC101929780,NBPF12 NA12156 nsv498688 1 144006217 144012543 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585401 M 9 0 1 LOC100288142,LOC101929780,NBPF12 nsv946755 1 144023048 144024352 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581382,nssv2580694,nssv2581339,nssv2581338,nssv2580710,nssv2581350,nssv2581340,nssv2581345,nssv2581387,nssv2581351,nssv2580697,nssv2581343,nssv2580703,nssv2581337,nssv2580713,nssv2581373,nssv2581390,nssv2581368,nssv2580708,nssv2581369,nssv2580704,nssv2581371,nssv2580700,nssv2581367,nssv2581384,nssv2581374,nssv2581388,nssv2580718,nssv2580701,nssv2581370,nssv2580698,nssv2580695,nssv2581389,nssv2581377,nssv2581336,nssv2581341,nssv2580711,nssv2581380,nssv2580696,nssv2581360,nssv2580709,nssv2581354,nssv2580712,nssv2581349,nssv2580706,nssv2581352,nssv2581381,nssv2581364,nssv2581385,nssv2581353,nssv2581386,nssv2581379,nssv2580707,nssv2581357,nssv2580699,nssv2581355,nssv2581383,nssv2581344,nssv2580705,nssv2581366,nssv2580716,nssv2581378,nssv2580715,nssv2581362,nssv2580719,nssv2581376,nssv2580717,nssv2581348,nssv2580702,nssv2581361,nssv2580714,nssv2581346,nssv2581342,nssv2581372,nssv2581356,nssv2581375,nssv2581359,nssv2581363,nssv2581358,nssv2581365,nssv2581347 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946756 1 144023048 144025078 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581394,nssv2581392,nssv2581400,nssv2581395,nssv2581397,nssv2581399,nssv2581398,nssv2581401,nssv2581393,nssv2581391,nssv2581396 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946757 1 144024352 144025078 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581410,nssv2581452,nssv2581481,nssv2581460,nssv2581414,nssv2581448,nssv2581474,nssv2581444,nssv2581424,nssv2581403,nssv2581423,nssv2581459,nssv2581418,nssv2581402,nssv2581432,nssv2581447,nssv2581420,nssv2581456,nssv2581406,nssv2581454,nssv2581408,nssv2581426,nssv2581419,nssv2581457,nssv2581428,nssv2581437,nssv2581480,nssv2581442,nssv2581482,nssv2581455,nssv2581422,nssv2581443,nssv2581427,nssv2581449,nssv2581479,nssv2581458,nssv2581473,nssv2581451,nssv2581477,nssv2581430,nssv2581412,nssv2581467,nssv2581478,nssv2581446,nssv2581411,nssv2581453,nssv2581421,nssv2581445,nssv2581417,nssv2581439,nssv2581475,nssv2581462,nssv2581476,nssv2581472,nssv2581409,nssv2581471,nssv2581425,nssv2581441,nssv2581405,nssv2581461,nssv2581404,nssv2581440,nssv2581415,nssv2581470,nssv2581434,nssv2581468,nssv2581407,nssv2581438,nssv2581413,nssv2581466,nssv2581431,nssv2581463,nssv2581416,nssv2581465,nssv2581450,nssv2581429,nssv2581469,nssv2581464,nssv2581435,nssv2581436,nssv2581433 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946758 1 144025078 144026356 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581566,nssv2581543,nssv2581511,nssv2581495,nssv2581516,nssv2581554,nssv2581567,nssv2581525,nssv2581496,nssv2581534,nssv2581500,nssv2581550,nssv2581572,nssv2581484,nssv2581517,nssv2581539,nssv2581509,nssv2581491,nssv2581503,nssv2581555,nssv2581486,nssv2581494,nssv2581505,nssv2581559,nssv2581520,nssv2581546,nssv2581512,nssv2581488,nssv2581504,nssv2581522,nssv2581565,nssv2581548,nssv2581574,nssv2581557,nssv2581568,nssv2581547,nssv2581515,nssv2581544,nssv2581506,nssv2581532,nssv2581502,nssv2581531,nssv2581519,nssv2581538,nssv2581526,nssv2581528,nssv2581571,nssv2581521,nssv2581499,nssv2581545,nssv2581485,nssv2581553,nssv2581523,nssv2581536,nssv2581492,nssv2581487,nssv2581489,nssv2581549,nssv2581514,nssv2581560,nssv2581490,nssv2581563,nssv2581524,nssv2581541,nssv2581569,nssv2581552,nssv2581573,nssv2581561,nssv2581510,nssv2581530,nssv2581570,nssv2581529,nssv2581508,nssv2581483,nssv2581498,nssv2581527,nssv2581507,nssv2581518,nssv2581513,nssv2581556,nssv2581501,nssv2581537,nssv2581493,nssv2581551,nssv2581497,nssv2581558,nssv2581542,nssv2581562,nssv2581564,nssv2581540,nssv2581535,nssv2581533 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946760 1 144028979 144029725 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2580916,nssv2580883,nssv2582618,nssv2580875,nssv2582624,nssv2582592,nssv2582612,nssv2582601,nssv2582608,nssv2580907,nssv2582609,nssv2580898,nssv2582619,nssv2580897,nssv2582614,nssv2580904,nssv2582606,nssv2582596,nssv2582620,nssv2580885,nssv2582593,nssv2580914,nssv2582607,nssv2580890,nssv2582625,nssv2580872,nssv2580917,nssv2580901,nssv2580919,nssv2580888,nssv2580923,nssv2580912,nssv2580869,nssv2580886,nssv2582598,nssv2580900,nssv2580873,nssv2580882,nssv2580915,nssv2580895,nssv2582617,nssv2580887,nssv2580918,nssv2580884,nssv2582613,nssv2580893,nssv2582615,nssv2582599,nssv2580921,nssv2580903,nssv2582623,nssv2580908,nssv2582605,nssv2580911,nssv2582622,nssv2580906,nssv2582616,nssv2582591,nssv2582604,nssv2582602,nssv2580874,nssv2580899,nssv2582597,nssv2580909,nssv2582600,nssv2580891,nssv2582610,nssv2580879,nssv2582594,nssv2580896,nssv2580922,nssv2580881,nssv2582621,nssv2580902,nssv2582611,nssv2580871,nssv2580920,nssv2582603,nssv2580924,nssv2580880,nssv2580876,nssv2580892,nssv2580870,nssv2580889,nssv2580878,nssv2582595,nssv2580905,nssv2580910,nssv2582626,nssv2580877,nssv2580913,nssv2580894 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946761 1 144029725 144030225 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581016,nssv2580960,nssv2580957,nssv2580935,nssv2581012,nssv2580978,nssv2580941,nssv2580989,nssv2580959,nssv2580964,nssv2581014,nssv2580963,nssv2580955,nssv2580970,nssv2580938,nssv2580999,nssv2581008,nssv2580996,nssv2581015,nssv2580987,nssv2581010,nssv2581004,nssv2581007,nssv2581002,nssv2580950,nssv2580937,nssv2580940,nssv2581003,nssv2580928,nssv2580929,nssv2580958,nssv2580986,nssv2580952,nssv2580979,nssv2580968,nssv2580930,nssv2580939,nssv2580985,nssv2580945,nssv2580988,nssv2580927,nssv2580982,nssv2580962,nssv2580973,nssv2581011,nssv2580976,nssv2580944,nssv2581006,nssv2580965,nssv2581005,nssv2580934,nssv2580998,nssv2581013,nssv2580995,nssv2580953,nssv2580991,nssv2580932,nssv2581000,nssv2580942,nssv2580977,nssv2580951,nssv2580980,nssv2580954,nssv2580971,nssv2580961,nssv2580933,nssv2580946,nssv2580972,nssv2580943,nssv2580981,nssv2580966,nssv2580926,nssv2580949,nssv2580990,nssv2581009,nssv2580983,nssv2580931,nssv2580925,nssv2580947,nssv2580994,nssv2580948,nssv2580969,nssv2580956,nssv2580992,nssv2580997,nssv2580984,nssv2581001,nssv2580993,nssv2580967,nssv2580936,nssv2580974,nssv2580975 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946762 1 144030225 144030993 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581709,nssv2581684,nssv2581654,nssv2581693,nssv2581716,nssv2581667,nssv2581723,nssv2581018,nssv2581704,nssv2581694,nssv2581647,nssv2581697,nssv2581019,nssv2581660,nssv2581021,nssv2581719,nssv2581659,nssv2581678,nssv2581652,nssv2581686,nssv2581644,nssv2581703,nssv2581710,nssv2581688,nssv2581658,nssv2581715,nssv2581653,nssv2581714,nssv2581662,nssv2581689,nssv2581025,nssv2581695,nssv2581651,nssv2581696,nssv2581712,nssv2581680,nssv2581711,nssv2581670,nssv2581027,nssv2581690,nssv2581656,nssv2581685,nssv2581717,nssv2581722,nssv2581024,nssv2581691,nssv2581705,nssv2581698,nssv2581665,nssv2581657,nssv2581026,nssv2581672,nssv2581713,nssv2581683,nssv2581706,nssv2581718,nssv2581720,nssv2581661,nssv2581022,nssv2581677,nssv2581721,nssv2581702,nssv2581708,nssv2581679,nssv2581646,nssv2581687,nssv2581023,nssv2581675,nssv2581020,nssv2581673,nssv2581663,nssv2581681,nssv2581648,nssv2581664,nssv2581649,nssv2581682,nssv2581707,nssv2581666,nssv2581655,nssv2581671,nssv2581650,nssv2581701,nssv2581645,nssv2581017,nssv2581699,nssv2581674,nssv2581668,nssv2581700,nssv2581692,nssv2581724,nssv2581669,nssv2581676 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946763 1 144030993 144032913 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581727,nssv2581814,nssv2581734,nssv2581771,nssv2581731,nssv2581770,nssv2581738,nssv2581772,nssv2581732,nssv2581811,nssv2581813,nssv2581760,nssv2581726,nssv2581783,nssv2581728,nssv2581793,nssv2581801,nssv2581766,nssv2581753,nssv2581755,nssv2581800,nssv2581785,nssv2581735,nssv2581810,nssv2581799,nssv2581773,nssv2581803,nssv2581765,nssv2581757,nssv2581774,nssv2581796,nssv2581782,nssv2581809,nssv2581807,nssv2581747,nssv2581769,nssv2581749,nssv2581781,nssv2581736,nssv2581805,nssv2581798,nssv2581779,nssv2581743,nssv2581791,nssv2581812,nssv2581752,nssv2581808,nssv2581762,nssv2581754,nssv2581777,nssv2581802,nssv2581763,nssv2581744,nssv2581794,nssv2581804,nssv2581780,nssv2581742,nssv2581761,nssv2581746,nssv2581767,nssv2581745,nssv2581775,nssv2581815,nssv2581792,nssv2581797,nssv2581764,nssv2581795,nssv2581751,nssv2581756,nssv2581784,nssv2581750,nssv2581806,nssv2581737,nssv2581776,nssv2581739,nssv2581788,nssv2581741,nssv2581787,nssv2581740,nssv2581789,nssv2581733,nssv2581759,nssv2581730,nssv2581768,nssv2581729,nssv2581758,nssv2581748,nssv2581725,nssv2581786,nssv2581816,nssv2581790,nssv2581778 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946764 1 144032913 144033616 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2581901,nssv2581862,nssv2581840,nssv2581857,nssv2581831,nssv2581878,nssv2581836,nssv2581873,nssv2581822,nssv2581866,nssv2581897,nssv2581886,nssv2581834,nssv2581851,nssv2581820,nssv2581875,nssv2581847,nssv2581844,nssv2581830,nssv2581887,nssv2581833,nssv2581869,nssv2581835,nssv2581848,nssv2581896,nssv2581906,nssv2581892,nssv2581818,nssv2581827,nssv2581845,nssv2581839,nssv2581859,nssv2581828,nssv2581870,nssv2581894,nssv2581868,nssv2581900,nssv2581876,nssv2581824,nssv2581898,nssv2581850,nssv2581856,nssv2581849,nssv2581885,nssv2581823,nssv2581871,nssv2581907,nssv2581877,nssv2581843,nssv2581865,nssv2581826,nssv2581863,nssv2581904,nssv2581884,nssv2581842,nssv2581883,nssv2581889,nssv2581867,nssv2581829,nssv2581880,nssv2581893,nssv2581855,nssv2581832,nssv2581817,nssv2581825,nssv2581902,nssv2581891,nssv2581860,nssv2581821,nssv2581852,nssv2581837,nssv2581882,nssv2581905,nssv2581858,nssv2581838,nssv2581874,nssv2581819,nssv2581879,nssv2581895,nssv2581854,nssv2581890,nssv2581861,nssv2581846,nssv2581903,nssv2581888,nssv2581864,nssv2581841,nssv2581908,nssv2581899,nssv2581881,nssv2581853,nssv2581872 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946765 1 144033616 144034362 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582924,nssv2582878,nssv2581927,nssv2582883,nssv2581934,nssv2582892,nssv2582909,nssv2582896,nssv2582923,nssv2582918,nssv2581911,nssv2581940,nssv2581917,nssv2581910,nssv2581931,nssv2582900,nssv2581939,nssv2582903,nssv2581923,nssv2581947,nssv2582913,nssv2582881,nssv2581914,nssv2581943,nssv2582906,nssv2582895,nssv2582908,nssv2582897,nssv2582904,nssv2581949,nssv2581919,nssv2581909,nssv2582917,nssv2582886,nssv2582905,nssv2582889,nssv2581912,nssv2582922,nssv2581928,nssv2582888,nssv2581924,nssv2581946,nssv2581932,nssv2582880,nssv2582921,nssv2581933,nssv2581926,nssv2582919,nssv2581918,nssv2582877,nssv2582910,nssv2582915,nssv2582912,nssv2582901,nssv2581941,nssv2582898,nssv2581915,nssv2582914,nssv2582916,nssv2582890,nssv2581916,nssv2582879,nssv2581913,nssv2582902,nssv2581935,nssv2582891,nssv2581925,nssv2582899,nssv2582920,nssv2581950,nssv2582911,nssv2582885,nssv2581942,nssv2582887,nssv2581922,nssv2581936,nssv2581938,nssv2582893,nssv2581921,nssv2581937,nssv2582907,nssv2582884,nssv2581929,nssv2582882,nssv2581920,nssv2582894,nssv2581930,nssv2581945,nssv2582876,nssv2581944,nssv2581948,nssv2581951 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946766 1 144034362 144034862 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582474,nssv2582493,nssv2582936,nssv2582478,nssv2582459,nssv2582505,nssv2582473,nssv2582937,nssv2582464,nssv2582498,nssv2582456,nssv2582468,nssv2582512,nssv2582476,nssv2582943,nssv2582486,nssv2582938,nssv2582469,nssv2582519,nssv2582489,nssv2582450,nssv2582499,nssv2582454,nssv2582484,nssv2582460,nssv2582483,nssv2582449,nssv2582506,nssv2582942,nssv2582510,nssv2582463,nssv2582501,nssv2582513,nssv2582481,nssv2582455,nssv2582504,nssv2582470,nssv2582931,nssv2582461,nssv2582485,nssv2582935,nssv2582502,nssv2582462,nssv2582508,nssv2582467,nssv2582509,nssv2582451,nssv2582507,nssv2582520,nssv2582511,nssv2582929,nssv2582479,nssv2582514,nssv2582497,nssv2582941,nssv2582492,nssv2582521,nssv2582925,nssv2582453,nssv2582475,nssv2582933,nssv2582927,nssv2582515,nssv2582496,nssv2582517,nssv2582500,nssv2582458,nssv2582472,nssv2582940,nssv2582495,nssv2582471,nssv2582930,nssv2582466,nssv2582503,nssv2582932,nssv2582490,nssv2582457,nssv2582477,nssv2582518,nssv2582482,nssv2582516,nssv2582934,nssv2582928,nssv2582465,nssv2582939,nssv2582494,nssv2582452,nssv2582487,nssv2582926,nssv2582480,nssv2582491,nssv2582488 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946767 1 144034862 144035636 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2582558,nssv2583510,nssv2582532,nssv2582567,nssv2582559,nssv2582533,nssv2582538,nssv2583509,nssv2582556,nssv2582534,nssv2582543,nssv2583506,nssv2583532,nssv2583494,nssv2582542,nssv2582564,nssv2582547,nssv2583499,nssv2582551,nssv2582528,nssv2582536,nssv2583500,nssv2582552,nssv2583508,nssv2582540,nssv2583515,nssv2583529,nssv2583504,nssv2582541,nssv2583511,nssv2582563,nssv2583492,nssv2582553,nssv2583503,nssv2582566,nssv2583502,nssv2582549,nssv2583519,nssv2583535,nssv2583497,nssv2582535,nssv2583518,nssv2583531,nssv2583526,nssv2582525,nssv2582557,nssv2582539,nssv2583523,nssv2582526,nssv2583517,nssv2583530,nssv2583495,nssv2582555,nssv2583521,nssv2582529,nssv2583527,nssv2583536,nssv2582523,nssv2582537,nssv2583512,nssv2583533,nssv2583496,nssv2582548,nssv2582561,nssv2582562,nssv2583522,nssv2582545,nssv2583498,nssv2583537,nssv2583513,nssv2583528,nssv2582560,nssv2583534,nssv2583520,nssv2582530,nssv2582531,nssv2582565,nssv2583505,nssv2582550,nssv2583501,nssv2582544,nssv2583525,nssv2582554,nssv2583524,nssv2582546,nssv2583516,nssv2583514,nssv2582527,nssv2582522,nssv2582524,nssv2583493,nssv2583507 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946768 1 144035636 144036897 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583571,nssv2583592,nssv2583612,nssv2583597,nssv2583557,nssv2583539,nssv2583544,nssv2583606,nssv2583553,nssv2583589,nssv2583542,nssv2583562,nssv2583564,nssv2583580,nssv2583559,nssv2583566,nssv2583615,nssv2583601,nssv2583545,nssv2583574,nssv2583547,nssv2583590,nssv2583551,nssv2583593,nssv2583558,nssv2583629,nssv2583541,nssv2583598,nssv2583548,nssv2583624,nssv2583570,nssv2583604,nssv2583628,nssv2583565,nssv2583614,nssv2583577,nssv2583618,nssv2583575,nssv2583609,nssv2583582,nssv2583622,nssv2583576,nssv2583611,nssv2583581,nssv2583540,nssv2583583,nssv2583543,nssv2583572,nssv2583610,nssv2583573,nssv2583550,nssv2583586,nssv2583546,nssv2583587,nssv2583549,nssv2583607,nssv2583560,nssv2583538,nssv2583555,nssv2583602,nssv2583563,nssv2583595,nssv2583617,nssv2583623,nssv2583613,nssv2583619,nssv2583561,nssv2583569,nssv2583616,nssv2583600,nssv2583554,nssv2583608,nssv2583626,nssv2583599,nssv2583621,nssv2583596,nssv2583625,nssv2583594,nssv2583568,nssv2583627,nssv2583552,nssv2583605,nssv2583556,nssv2583603,nssv2583567,nssv2583588,nssv2583585,nssv2583620,nssv2583579,nssv2583584,nssv2583578,nssv2583591 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv13 1 144036453 144068323 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv13 M 1 0 1 LOC100288142,LOC101929780,NBPF12 NA15510 nsv946769 1 144036897 144037645 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583662,nssv2583710,nssv2583720,nssv2583667,nssv2583647,nssv2583675,nssv2583645,nssv2583673,nssv2583640,nssv2583665,nssv2583712,nssv2583699,nssv2583703,nssv2583680,nssv2583659,nssv2583653,nssv2583641,nssv2583683,nssv2583709,nssv2583687,nssv2583658,nssv2583715,nssv2583705,nssv2583663,nssv2583635,nssv2583690,nssv2583648,nssv2583694,nssv2583702,nssv2583660,nssv2583636,nssv2583676,nssv2583716,nssv2583630,nssv2583643,nssv2583678,nssv2583719,nssv2583695,nssv2583633,nssv2583684,nssv2583639,nssv2583656,nssv2583652,nssv2583688,nssv2583651,nssv2583668,nssv2583638,nssv2583698,nssv2583649,nssv2583718,nssv2583713,nssv2583693,nssv2583631,nssv2583686,nssv2583661,nssv2583682,nssv2583717,nssv2583696,nssv2583637,nssv2583672,nssv2583642,nssv2583697,nssv2583706,nssv2583671,nssv2583634,nssv2583689,nssv2583632,nssv2583691,nssv2583701,nssv2583681,nssv2583646,nssv2583721,nssv2583707,nssv2583669,nssv2583704,nssv2583679,nssv2583700,nssv2583711,nssv2583650,nssv2583677,nssv2583644,nssv2583692,nssv2583708,nssv2583714,nssv2583654,nssv2583664,nssv2583655,nssv2583666,nssv2583674,nssv2583670,nssv2583657,nssv2583685 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946770 1 144037645 144038348 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2583754,nssv2583722,nssv2584427,nssv2583763,nssv2584432,nssv2583768,nssv2583739,nssv2583771,nssv2583731,nssv2583761,nssv2583742,nssv2584426,nssv2583751,nssv2583762,nssv2583729,nssv2583782,nssv2583735,nssv2583789,nssv2583750,nssv2583787,nssv2584423,nssv2584436,nssv2583797,nssv2583770,nssv2583727,nssv2583779,nssv2583795,nssv2583778,nssv2583741,nssv2583769,nssv2583738,nssv2583780,nssv2583725,nssv2583773,nssv2583728,nssv2583759,nssv2583743,nssv2583786,nssv2583798,nssv2583791,nssv2583747,nssv2583783,nssv2583746,nssv2583760,nssv2583794,nssv2583776,nssv2583796,nssv2583788,nssv2583723,nssv2583775,nssv2583733,nssv2583748,nssv2584434,nssv2583767,nssv2583732,nssv2583784,nssv2583737,nssv2584425,nssv2583740,nssv2583758,nssv2583792,nssv2583781,nssv2584424,nssv2583752,nssv2583744,nssv2583755,nssv2583736,nssv2583764,nssv2583734,nssv2583757,nssv2583730,nssv2584430,nssv2583799,nssv2583777,nssv2583753,nssv2583774,nssv2583724,nssv2583756,nssv2584428,nssv2583749,nssv2584431,nssv2583790,nssv2583726,nssv2584435,nssv2583793,nssv2584433,nssv2583745,nssv2584429,nssv2583772,nssv2583766,nssv2583765,nssv2583785 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946771 1 144038348 144039094 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584520,nssv2584460,nssv2584438,nssv2584484,nssv2584515,nssv2584469,nssv2584443,nssv2584522,nssv2584512,nssv2584481,nssv2584453,nssv2584483,nssv2584452,nssv2584485,nssv2584444,nssv2584498,nssv2584509,nssv2584470,nssv2584457,nssv2584475,nssv2584458,nssv2584495,nssv2584525,nssv2584490,nssv2584446,nssv2584489,nssv2584451,nssv2584491,nssv2584447,nssv2584478,nssv2584513,nssv2584471,nssv2584454,nssv2584480,nssv2584440,nssv2584474,nssv2584462,nssv2584463,nssv2584508,nssv2584499,nssv2584450,nssv2584473,nssv2584514,nssv2584504,nssv2584448,nssv2584494,nssv2584798,nssv2584487,nssv2584511,nssv2584526,nssv2584465,nssv2584467,nssv2584442,nssv2584503,nssv2584456,nssv2584492,nssv2584466,nssv2584799,nssv2584521,nssv2584500,nssv2584449,nssv2584523,nssv2584524,nssv2584505,nssv2584461,nssv2584502,nssv2584468,nssv2584519,nssv2584445,nssv2584517,nssv2584441,nssv2584476,nssv2584459,nssv2584482,nssv2584507,nssv2584506,nssv2584455,nssv2584479,nssv2584516,nssv2584518,nssv2584510,nssv2584488,nssv2584439,nssv2584486,nssv2584496,nssv2584493,nssv2584497,nssv2584501,nssv2584477,nssv2584437,nssv2584464,nssv2584472 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946772 1 144039094 144039594 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584888,nssv2584889,nssv2584832,nssv2584842,nssv2584872,nssv2584850,nssv2584825,nssv2584866,nssv2584875,nssv2584831,nssv2584809,nssv2584836,nssv2584813,nssv2584839,nssv2584829,nssv2584856,nssv2584819,nssv2584885,nssv2584830,nssv2584857,nssv2584826,nssv2584861,nssv2584812,nssv2584864,nssv2584814,nssv2584846,nssv2584890,nssv2584851,nssv2584823,nssv2584868,nssv2584802,nssv2584845,nssv2584876,nssv2584834,nssv2584817,nssv2584869,nssv2584880,nssv2584865,nssv2584871,nssv2584870,nssv2584807,nssv2584801,nssv2584883,nssv2584891,nssv2584804,nssv2584847,nssv2584877,nssv2584854,nssv2584816,nssv2584862,nssv2584818,nssv2584841,nssv2584822,nssv2584840,nssv2584808,nssv2584833,nssv2584821,nssv2584838,nssv2584803,nssv2584828,nssv2584815,nssv2584881,nssv2584878,nssv2584860,nssv2584874,nssv2584843,nssv2584811,nssv2584849,nssv2584806,nssv2584858,nssv2584805,nssv2584867,nssv2584810,nssv2584859,nssv2584879,nssv2584882,nssv2584887,nssv2584852,nssv2584884,nssv2584855,nssv2584820,nssv2584844,nssv2584873,nssv2584800,nssv2584835,nssv2584853,nssv2584827,nssv2584848,nssv2584863,nssv2584886,nssv2584824,nssv2584837 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946773 1 144039594 144040378 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2584908,nssv2584962,nssv2584911,nssv2584931,nssv2584896,nssv2584954,nssv2584971,nssv2584974,nssv2584913,nssv2584923,nssv2584894,nssv2584925,nssv2584899,nssv2584892,nssv2584904,nssv2584957,nssv2584902,nssv2584950,nssv2584900,nssv2584934,nssv2584917,nssv2584949,nssv2584967,nssv2584960,nssv2584909,nssv2584927,nssv2584901,nssv2584981,nssv2584922,nssv2584937,nssv2584915,nssv2584977,nssv2584905,nssv2584941,nssv2584921,nssv2584944,nssv2584964,nssv2584893,nssv2584895,nssv2584939,nssv2584969,nssv2584956,nssv2584907,nssv2584961,nssv2584903,nssv2584930,nssv2584979,nssv2584952,nssv2584982,nssv2584938,nssv2584980,nssv2584953,nssv2584910,nssv2584933,nssv2584924,nssv2584926,nssv2584970,nssv2584940,nssv2584968,nssv2584936,nssv2584965,nssv2584947,nssv2584963,nssv2584935,nssv2584914,nssv2584942,nssv2584898,nssv2584946,nssv2584972,nssv2584958,nssv2584975,nssv2584948,nssv2584976,nssv2584919,nssv2584966,nssv2584932,nssv2584918,nssv2584955,nssv2584906,nssv2584928,nssv2584912,nssv2584945,nssv2584983,nssv2584959,nssv2584897,nssv2584943,nssv2584951,nssv2584929,nssv2584973,nssv2584978,nssv2584920,nssv2584916 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946774 1 144040378 144041639 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2585910,nssv2585892,nssv2585920,nssv2585896,nssv2585009,nssv2585901,nssv2584990,nssv2585023,nssv2585007,nssv2585035,nssv2584998,nssv2585028,nssv2584989,nssv2585899,nssv2585916,nssv2585024,nssv2584986,nssv2585887,nssv2584996,nssv2585895,nssv2585003,nssv2585026,nssv2584999,nssv2585888,nssv2585906,nssv2585030,nssv2585909,nssv2585037,nssv2584988,nssv2585027,nssv2585000,nssv2585032,nssv2584995,nssv2585011,nssv2585014,nssv2585008,nssv2584987,nssv2585913,nssv2584991,nssv2585918,nssv2584994,nssv2585902,nssv2585002,nssv2585015,nssv2585010,nssv2585900,nssv2584993,nssv2585894,nssv2585922,nssv2585034,nssv2584997,nssv2585019,nssv2585904,nssv2585890,nssv2585013,nssv2584985,nssv2585907,nssv2585889,nssv2585001,nssv2585012,nssv2585908,nssv2585917,nssv2585911,nssv2585021,nssv2585915,nssv2585029,nssv2585903,nssv2585022,nssv2585912,nssv2585891,nssv2585016,nssv2585898,nssv2584992,nssv2585031,nssv2585006,nssv2585020,nssv2585919,nssv2585018,nssv2585005,nssv2585897,nssv2585905,nssv2585914,nssv2585923,nssv2585036,nssv2585004,nssv2585038,nssv2585033,nssv2584984,nssv2585921,nssv2585025,nssv2585893,nssv2585017 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946775 1 144041639 144042285 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587082,nssv2587080,nssv2585954,nssv2585951,nssv2585940,nssv2587030,nssv2585936,nssv2587033,nssv2585943,nssv2587034,nssv2585956,nssv2587046,nssv2587065,nssv2587029,nssv2587069,nssv2587035,nssv2585934,nssv2587036,nssv2585953,nssv2585948,nssv2585947,nssv2587031,nssv2585950,nssv2587025,nssv2585929,nssv2587027,nssv2585946,nssv2587056,nssv2587079,nssv2587047,nssv2585927,nssv2587038,nssv2585928,nssv2585925,nssv2587075,nssv2587053,nssv2587071,nssv2587051,nssv2585939,nssv2587057,nssv2585935,nssv2587032,nssv2587062,nssv2585955,nssv2585945,nssv2585924,nssv2587063,nssv2587061,nssv2585930,nssv2587040,nssv2587064,nssv2587048,nssv2585932,nssv2587039,nssv2587070,nssv2587052,nssv2585931,nssv2587049,nssv2587074,nssv2587058,nssv2587081,nssv2587059,nssv2585937,nssv2587042,nssv2587024,nssv2587055,nssv2585938,nssv2587045,nssv2585949,nssv2585952,nssv2585944,nssv2587037,nssv2587068,nssv2587044,nssv2585941,nssv2587076,nssv2587078,nssv2587041,nssv2585933,nssv2587073,nssv2585942,nssv2587072,nssv2585926,nssv2587050,nssv2587067,nssv2587026,nssv2587066,nssv2587060,nssv2587028,nssv2587043,nssv2587054,nssv2587077 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946776 1 144042285 144042785 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587088,nssv2587145,nssv2587102,nssv2587150,nssv2587160,nssv2587149,nssv2587158,nssv2587174,nssv2587090,nssv2587127,nssv2587097,nssv2587136,nssv2587104,nssv2587139,nssv2587156,nssv2587130,nssv2587094,nssv2587129,nssv2587116,nssv2587146,nssv2587095,nssv2587142,nssv2587154,nssv2587135,nssv2587108,nssv2587165,nssv2587085,nssv2587134,nssv2587103,nssv2587141,nssv2587099,nssv2587131,nssv2587113,nssv2587138,nssv2587087,nssv2587122,nssv2587101,nssv2587152,nssv2587157,nssv2587132,nssv2587171,nssv2587128,nssv2587161,nssv2587118,nssv2587105,nssv2587124,nssv2587086,nssv2587140,nssv2587092,nssv2587121,nssv2587167,nssv2587151,nssv2587163,nssv2587172,nssv2587109,nssv2587143,nssv2587162,nssv2587120,nssv2587100,nssv2587111,nssv2587155,nssv2587168,nssv2587159,nssv2587147,nssv2587089,nssv2587084,nssv2587115,nssv2587125,nssv2587093,nssv2587148,nssv2587106,nssv2587144,nssv2587098,nssv2587164,nssv2587091,nssv2587123,nssv2587173,nssv2587107,nssv2587096,nssv2587169,nssv2587166,nssv2587110,nssv2587112,nssv2587126,nssv2587170,nssv2587153,nssv2587119,nssv2587133,nssv2587114,nssv2587137,nssv2587083,nssv2587117 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946777 1 144042785 144043649 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587260,nssv2587249,nssv2587209,nssv2587229,nssv2587197,nssv2587231,nssv2587191,nssv2587255,nssv2587215,nssv2587234,nssv2587199,nssv2587177,nssv2587192,nssv2587247,nssv2587263,nssv2587253,nssv2587200,nssv2587251,nssv2587205,nssv2587228,nssv2587194,nssv2587225,nssv2587211,nssv2587210,nssv2587219,nssv2587224,nssv2587201,nssv2587256,nssv2587179,nssv2587230,nssv2587259,nssv2587181,nssv2587198,nssv2587214,nssv2587193,nssv2587235,nssv2587206,nssv2587176,nssv2587216,nssv2587243,nssv2587266,nssv2587226,nssv2587188,nssv2587252,nssv2587203,nssv2587180,nssv2587189,nssv2587187,nssv2587190,nssv2587220,nssv2587257,nssv2587221,nssv2587264,nssv2587250,nssv2587186,nssv2587237,nssv2587218,nssv2587245,nssv2587204,nssv2587242,nssv2587212,nssv2587248,nssv2587265,nssv2587222,nssv2587262,nssv2587213,nssv2587207,nssv2587227,nssv2587261,nssv2587254,nssv2587208,nssv2587233,nssv2587195,nssv2587217,nssv2587183,nssv2587175,nssv2587196,nssv2587184,nssv2587185,nssv2587241,nssv2587178,nssv2587238,nssv2587258,nssv2587244,nssv2587202,nssv2587223,nssv2587182,nssv2587232,nssv2587236,nssv2587239,nssv2587246,nssv2587240 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946778 1 144043649 144044774 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587307,nssv2587324,nssv2587301,nssv2587956,nssv2587308,nssv2587960,nssv2587283,nssv2587268,nssv2587293,nssv2587313,nssv2587291,nssv2587955,nssv2587287,nssv2587323,nssv2587289,nssv2587962,nssv2587282,nssv2587306,nssv2587295,nssv2587954,nssv2587299,nssv2587327,nssv2587974,nssv2587949,nssv2587269,nssv2587272,nssv2587969,nssv2587302,nssv2587968,nssv2587321,nssv2587288,nssv2587959,nssv2587292,nssv2587317,nssv2587276,nssv2587953,nssv2587967,nssv2587950,nssv2587972,nssv2587267,nssv2587284,nssv2587963,nssv2587303,nssv2587275,nssv2587280,nssv2587328,nssv2587966,nssv2587957,nssv2587971,nssv2587330,nssv2587281,nssv2587316,nssv2587298,nssv2587948,nssv2587297,nssv2587322,nssv2587294,nssv2587951,nssv2587311,nssv2587326,nssv2587970,nssv2587331,nssv2587296,nssv2587277,nssv2587285,nssv2587279,nssv2587274,nssv2587964,nssv2587310,nssv2587320,nssv2587300,nssv2587314,nssv2587270,nssv2587319,nssv2587304,nssv2587278,nssv2587965,nssv2587325,nssv2587286,nssv2587271,nssv2587973,nssv2587309,nssv2587290,nssv2587961,nssv2587273,nssv2587312,nssv2587958,nssv2587952,nssv2587305,nssv2587329,nssv2587315,nssv2587318 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946779 1 144044774 144046841 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587984,nssv2587987,nssv2587985,nssv2588014,nssv2588019,nssv2588046,nssv2588066,nssv2587986,nssv2588002,nssv2588032,nssv2587995,nssv2588048,nssv2587989,nssv2588023,nssv2588058,nssv2588050,nssv2587988,nssv2588043,nssv2588004,nssv2588056,nssv2587997,nssv2588041,nssv2587991,nssv2588038,nssv2587996,nssv2588017,nssv2588009,nssv2588035,nssv2588011,nssv2588037,nssv2588018,nssv2587976,nssv2587992,nssv2588033,nssv2588016,nssv2588029,nssv2588060,nssv2588042,nssv2587998,nssv2588024,nssv2588007,nssv2588052,nssv2588008,nssv2588026,nssv2588000,nssv2588031,nssv2588012,nssv2588010,nssv2588059,nssv2588040,nssv2588001,nssv2588030,nssv2587977,nssv2588045,nssv2588003,nssv2587983,nssv2587990,nssv2588053,nssv2588057,nssv2587980,nssv2587978,nssv2588022,nssv2588006,nssv2588049,nssv2588063,nssv2588036,nssv2587993,nssv2588055,nssv2588015,nssv2588013,nssv2588061,nssv2588025,nssv2588005,nssv2588054,nssv2587982,nssv2588021,nssv2587994,nssv2587979,nssv2588062,nssv2588034,nssv2588065,nssv2588047,nssv2588064,nssv2588051,nssv2587981,nssv2588044,nssv2587999,nssv2588028,nssv2587975,nssv2588020,nssv2588027,nssv2588039 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946780 1 144046841 144047341 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587666,nssv2587672,nssv2588077,nssv2587689,nssv2587650,nssv2587678,nssv2587707,nssv2588067,nssv2587645,nssv2588068,nssv2587663,nssv2587681,nssv2587709,nssv2587694,nssv2587652,nssv2587670,nssv2587659,nssv2587660,nssv2587704,nssv2587703,nssv2587643,nssv2587668,nssv2587642,nssv2587686,nssv2587641,nssv2587676,nssv2587640,nssv2587699,nssv2587649,nssv2588078,nssv2587651,nssv2587675,nssv2587646,nssv2587682,nssv2587710,nssv2587680,nssv2587653,nssv2587701,nssv2587655,nssv2587685,nssv2588084,nssv2587688,nssv2588076,nssv2587692,nssv2588080,nssv2588071,nssv2588082,nssv2587687,nssv2588081,nssv2587690,nssv2587708,nssv2587657,nssv2588083,nssv2587671,nssv2587713,nssv2587691,nssv2587644,nssv2587700,nssv2588070,nssv2587674,nssv2587654,nssv2587698,nssv2587647,nssv2587702,nssv2587712,nssv2587696,nssv2588069,nssv2587679,nssv2587705,nssv2587684,nssv2587648,nssv2588072,nssv2587706,nssv2587661,nssv2588074,nssv2587695,nssv2587665,nssv2588079,nssv2587711,nssv2587664,nssv2587658,nssv2587677,nssv2587662,nssv2587693,nssv2587656,nssv2587683,nssv2588073,nssv2588075,nssv2587667,nssv2587697,nssv2587673,nssv2587669 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946781 1 144047341 144048200 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587758,nssv2587795,nssv2587746,nssv2587772,nssv2587743,nssv2587789,nssv2587727,nssv2587782,nssv2587720,nssv2587793,nssv2587799,nssv2587780,nssv2587755,nssv2587791,nssv2587731,nssv2587767,nssv2587751,nssv2587790,nssv2587728,nssv2587749,nssv2587754,nssv2587774,nssv2587732,nssv2587783,nssv2587740,nssv2587771,nssv2587736,nssv2587787,nssv2587744,nssv2587778,nssv2587739,nssv2587752,nssv2587798,nssv2587792,nssv2587733,nssv2587794,nssv2587800,nssv2587775,nssv2587796,nssv2587760,nssv2587747,nssv2587715,nssv2587745,nssv2587756,nssv2587734,nssv2587777,nssv2587717,nssv2587762,nssv2587804,nssv2587768,nssv2587748,nssv2587770,nssv2587742,nssv2587718,nssv2587757,nssv2587776,nssv2587729,nssv2587724,nssv2587738,nssv2587714,nssv2587805,nssv2587719,nssv2587730,nssv2587766,nssv2587735,nssv2587722,nssv2587721,nssv2587785,nssv2587801,nssv2587786,nssv2587797,nssv2587788,nssv2587723,nssv2587769,nssv2587737,nssv2587725,nssv2587716,nssv2587761,nssv2587803,nssv2587764,nssv2587741,nssv2587781,nssv2587802,nssv2587763,nssv2587750,nssv2587753,nssv2587779,nssv2587726,nssv2587773,nssv2587759,nssv2587784,nssv2587765 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946782 1 144048200 144049430 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587839,nssv2587806,nssv2587824,nssv2587847,nssv2587827,nssv2587852,nssv2587828,nssv2587869,nssv2587819,nssv2587857,nssv2587814,nssv2587843,nssv2587886,nssv2587840,nssv2587812,nssv2587849,nssv2587880,nssv2587864,nssv2587838,nssv2587834,nssv2587879,nssv2587865,nssv2587881,nssv2587875,nssv2587818,nssv2587876,nssv2587835,nssv2587851,nssv2587808,nssv2587872,nssv2587831,nssv2587871,nssv2587882,nssv2587837,nssv2587836,nssv2587859,nssv2587826,nssv2587866,nssv2587817,nssv2587853,nssv2587832,nssv2587845,nssv2587820,nssv2587861,nssv2587825,nssv2587855,nssv2587821,nssv2587833,nssv2587829,nssv2587850,nssv2587813,nssv2587867,nssv2587816,nssv2587874,nssv2587815,nssv2587863,nssv2587822,nssv2587841,nssv2587810,nssv2587873,nssv2587884,nssv2587870,nssv2587823,nssv2587846,nssv2587877,nssv2587856,nssv2587885,nssv2587830,nssv2587811,nssv2587854,nssv2587878,nssv2587807,nssv2587883,nssv2587862,nssv2587809,nssv2587844,nssv2587868,nssv2587842,nssv2587858,nssv2587860,nssv2587848 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946783 1 144048200 144050103 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587897,nssv2587895,nssv2587894,nssv2587888,nssv2587896,nssv2587892,nssv2587893,nssv2587891,nssv2587890,nssv2587887,nssv2587889 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946785 1 144049430 144050603 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587931,nssv2588582,nssv2587905,nssv2588584,nssv2587923,nssv2588564,nssv2588585,nssv2587940,nssv2587930,nssv2588577,nssv2587916,nssv2588572,nssv2588586,nssv2587934,nssv2587914,nssv2587936,nssv2587904,nssv2588570,nssv2588591,nssv2587944,nssv2587906,nssv2588580,nssv2587911,nssv2588575,nssv2587919,nssv2587941,nssv2587912,nssv2587925,nssv2587910,nssv2587938,nssv2587924,nssv2588578,nssv2587913,nssv2588571,nssv2587920,nssv2588573,nssv2587909,nssv2588569,nssv2588593,nssv2587922,nssv2588589,nssv2587943,nssv2587918,nssv2587946,nssv2588592,nssv2587929,nssv2587927,nssv2587942,nssv2587915,nssv2587939,nssv2587917,nssv2588568,nssv2587928,nssv2588567,nssv2587901,nssv2588565,nssv2588590,nssv2588583,nssv2587907,nssv2588566,nssv2587921,nssv2588579,nssv2588587,nssv2587926,nssv2587902,nssv2587937,nssv2587908,nssv2588581,nssv2588588,nssv2587899,nssv2588594,nssv2588574,nssv2587903,nssv2587947,nssv2587900,nssv2587935,nssv2587945,nssv2588576,nssv2587933,nssv2587932 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946786 1 144050103 144050603 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588602,nssv2588599,nssv2588597,nssv2588600,nssv2588598,nssv2588606,nssv2588604,nssv2588595,nssv2588601,nssv2588603,nssv2588605,nssv2588596 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946787 1 144050603 144052006 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588621,nssv2588665,nssv2588620,nssv2588645,nssv2588610,nssv2588642,nssv2588623,nssv2588647,nssv2588615,nssv2588659,nssv2588680,nssv2588634,nssv2588686,nssv2588641,nssv2588636,nssv2588656,nssv2588689,nssv2588671,nssv2588677,nssv2588668,nssv2588627,nssv2588658,nssv2588632,nssv2588633,nssv2588631,nssv2588663,nssv2588619,nssv2588675,nssv2588624,nssv2588660,nssv2588608,nssv2588637,nssv2588629,nssv2588691,nssv2588679,nssv2588653,nssv2588616,nssv2588695,nssv2588678,nssv2588651,nssv2588618,nssv2588669,nssv2588681,nssv2588667,nssv2588613,nssv2588644,nssv2588617,nssv2588649,nssv2588628,nssv2588630,nssv2588622,nssv2588672,nssv2588685,nssv2588662,nssv2588614,nssv2588698,nssv2588683,nssv2588639,nssv2588609,nssv2588661,nssv2588626,nssv2588670,nssv2588612,nssv2588657,nssv2588684,nssv2588646,nssv2588696,nssv2588650,nssv2588638,nssv2588666,nssv2588682,nssv2588692,nssv2588694,nssv2588655,nssv2588635,nssv2588652,nssv2588625,nssv2588676,nssv2588690,nssv2588640,nssv2588611,nssv2588697,nssv2588693,nssv2588674,nssv2588673,nssv2588607,nssv2588664,nssv2588688,nssv2588687,nssv2588654,nssv2588648,nssv2588643 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946788 1 144052006 144052617 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588711,nssv2588729,nssv2588721,nssv2588742,nssv2588786,nssv2588757,nssv2588777,nssv2588753,nssv2588778,nssv2588750,nssv2588776,nssv2588768,nssv2588714,nssv2588758,nssv2588772,nssv2588726,nssv2588706,nssv2588737,nssv2588715,nssv2588741,nssv2588724,nssv2588749,nssv2588712,nssv2588733,nssv2588775,nssv2588743,nssv2588717,nssv2588760,nssv2588709,nssv2588745,nssv2588774,nssv2588740,nssv2588703,nssv2588747,nssv2588716,nssv2588761,nssv2588701,nssv2588767,nssv2588702,nssv2588739,nssv2588770,nssv2588748,nssv2588727,nssv2588755,nssv2588713,nssv2588738,nssv2588719,nssv2588756,nssv2588708,nssv2588762,nssv2588700,nssv2588752,nssv2588710,nssv2588734,nssv2588771,nssv2587333,nssv2588788,nssv2588744,nssv2588720,nssv2588735,nssv2588707,nssv2588754,nssv2588781,nssv2588751,nssv2588718,nssv2588722,nssv2587332,nssv2588746,nssv2588723,nssv2588765,nssv2588730,nssv2588732,nssv2588782,nssv2588764,nssv2588704,nssv2588731,nssv2588728,nssv2588736,nssv2588773,nssv2588725,nssv2588705,nssv2588766,nssv2588769,nssv2588699,nssv2588785,nssv2588763,nssv2588780,nssv2588759,nssv2588787,nssv2588779,nssv2588784,nssv2588783 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946789 1 144052617 144053370 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587350,nssv2587379,nssv2587356,nssv2587383,nssv2587422,nssv2587403,nssv2587345,nssv2587374,nssv2587343,nssv2587391,nssv2587348,nssv2587395,nssv2587363,nssv2587364,nssv2587405,nssv2587419,nssv2587338,nssv2587382,nssv2587404,nssv2587388,nssv2587336,nssv2587378,nssv2587424,nssv2587416,nssv2587346,nssv2587387,nssv2587413,nssv2587400,nssv2587341,nssv2587423,nssv2587362,nssv2587397,nssv2587355,nssv2587357,nssv2587408,nssv2587368,nssv2587347,nssv2587390,nssv2587349,nssv2587396,nssv2587358,nssv2587385,nssv2587359,nssv2587360,nssv2587410,nssv2587384,nssv2587335,nssv2587392,nssv2587417,nssv2587380,nssv2587366,nssv2587402,nssv2587339,nssv2587371,nssv2587418,nssv2587372,nssv2587425,nssv2587415,nssv2587354,nssv2587373,nssv2587353,nssv2587386,nssv2587342,nssv2587420,nssv2587407,nssv2587367,nssv2587412,nssv2587369,nssv2587337,nssv2587370,nssv2587406,nssv2587361,nssv2587411,nssv2587376,nssv2587352,nssv2587381,nssv2587409,nssv2587377,nssv2587351,nssv2587334,nssv2587344,nssv2587389,nssv2587340,nssv2587394,nssv2587365,nssv2587398,nssv2587421,nssv2587399,nssv2587401,nssv2587393,nssv2587414,nssv2587375 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946790 1 144053370 144053995 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587454,nssv2587435,nssv2587437,nssv2587493,nssv2587434,nssv2587487,nssv2587512,nssv2587499,nssv2587457,nssv2587506,nssv2587458,nssv2587502,nssv2587467,nssv2587475,nssv2587515,nssv2587494,nssv2587449,nssv2587471,nssv2587444,nssv2587426,nssv2587450,nssv2587495,nssv2587439,nssv2587498,nssv2587451,nssv2587489,nssv2587509,nssv2587481,nssv2587513,nssv2587486,nssv2587447,nssv2587492,nssv2587517,nssv2587428,nssv2587442,nssv2587490,nssv2587452,nssv2587507,nssv2587455,nssv2587500,nssv2587430,nssv2587485,nssv2587466,nssv2587488,nssv2587462,nssv2587477,nssv2587453,nssv2587472,nssv2587514,nssv2587491,nssv2587508,nssv2587464,nssv2587429,nssv2587432,nssv2587445,nssv2587461,nssv2587463,nssv2587468,nssv2587516,nssv2587478,nssv2587448,nssv2587497,nssv2587459,nssv2587482,nssv2587443,nssv2587479,nssv2587436,nssv2587503,nssv2587460,nssv2587483,nssv2587441,nssv2587476,nssv2587511,nssv2587438,nssv2587456,nssv2587484,nssv2587510,nssv2587496,nssv2587469,nssv2587465,nssv2587446,nssv2587431,nssv2587440,nssv2587474,nssv2587433,nssv2587504,nssv2587470,nssv2587505,nssv2587501,nssv2587427,nssv2587480,nssv2587473 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946791 1 144053995 144054672 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587609,nssv2587584,nssv2587550,nssv2587542,nssv2587521,nssv2587570,nssv2587531,nssv2587558,nssv2587551,nssv2587559,nssv2587524,nssv2587581,nssv2587520,nssv2587579,nssv2587532,nssv2587586,nssv2587538,nssv2587553,nssv2587591,nssv2587603,nssv2587533,nssv2587567,nssv2587540,nssv2587585,nssv2587530,nssv2587557,nssv2587541,nssv2587600,nssv2587523,nssv2587577,nssv2587598,nssv2587580,nssv2587539,nssv2587587,nssv2587544,nssv2587556,nssv2587590,nssv2587519,nssv2587608,nssv2587583,nssv2587526,nssv2587565,nssv2587602,nssv2587560,nssv2587593,nssv2587563,nssv2587525,nssv2587573,nssv2587534,nssv2587571,nssv2587589,nssv2587604,nssv2587592,nssv2587562,nssv2587529,nssv2587568,nssv2587606,nssv2587546,nssv2587543,nssv2587554,nssv2587597,nssv2587607,nssv2587527,nssv2587549,nssv2587547,nssv2587545,nssv2587601,nssv2587575,nssv2587595,nssv2587574,nssv2587596,nssv2587552,nssv2587528,nssv2587555,nssv2587536,nssv2587564,nssv2587594,nssv2587518,nssv2587548,nssv2587561,nssv2587535,nssv2587578,nssv2587522,nssv2587572,nssv2587605,nssv2587599,nssv2587537,nssv2587566,nssv2587588,nssv2587582,nssv2587569,nssv2587576 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946792 1 144054672 144055933 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588258,nssv2588290,nssv2587615,nssv2588274,nssv2588297,nssv2588262,nssv2587628,nssv2588270,nssv2587621,nssv2588288,nssv2587624,nssv2588266,nssv2587625,nssv2588256,nssv2587626,nssv2588281,nssv2588296,nssv2588263,nssv2588305,nssv2588269,nssv2588301,nssv2588295,nssv2587618,nssv2588280,nssv2587629,nssv2588291,nssv2588300,nssv2587637,nssv2588257,nssv2588306,nssv2587612,nssv2588279,nssv2587620,nssv2588275,nssv2588302,nssv2587633,nssv2587613,nssv2588265,nssv2587622,nssv2588285,nssv2587635,nssv2587636,nssv2588299,nssv2588261,nssv2587623,nssv2588294,nssv2587611,nssv2588278,nssv2587631,nssv2588289,nssv2587616,nssv2588260,nssv2588298,nssv2588271,nssv2588303,nssv2588287,nssv2587630,nssv2588283,nssv2587619,nssv2588292,nssv2587634,nssv2588267,nssv2587614,nssv2588264,nssv2587617,nssv2588293,nssv2587632,nssv2588277,nssv2587639,nssv2588282,nssv2588304,nssv2588276,nssv2587638,nssv2588268,nssv2587627,nssv2588259,nssv2587610,nssv2588286,nssv2588284,nssv2588273,nssv2588272 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946793 1 144054672 144057186 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588317,nssv2588308,nssv2588316,nssv2588311,nssv2588310,nssv2588315,nssv2588309,nssv2588312,nssv2588314,nssv2588307,nssv2588313 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946794 1 144055933 144057186 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588355,nssv2588350,nssv2588372,nssv2588334,nssv2588366,nssv2588339,nssv2588382,nssv2588331,nssv2588384,nssv2588390,nssv2588358,nssv2588321,nssv2588374,nssv2588330,nssv2588381,nssv2588320,nssv2588351,nssv2588347,nssv2588364,nssv2588329,nssv2588318,nssv2588335,nssv2588383,nssv2588327,nssv2588363,nssv2588349,nssv2588377,nssv2588325,nssv2588386,nssv2588342,nssv2588379,nssv2588392,nssv2588341,nssv2588324,nssv2588370,nssv2588322,nssv2588373,nssv2588323,nssv2588359,nssv2588396,nssv2588398,nssv2588336,nssv2588376,nssv2588333,nssv2588352,nssv2588319,nssv2588361,nssv2588326,nssv2588369,nssv2588391,nssv2588345,nssv2588343,nssv2588360,nssv2588397,nssv2588378,nssv2588337,nssv2588371,nssv2588394,nssv2588354,nssv2588389,nssv2588365,nssv2588340,nssv2588362,nssv2588393,nssv2588368,nssv2588388,nssv2588357,nssv2588332,nssv2588387,nssv2588328,nssv2588380,nssv2588338,nssv2588375,nssv2588346,nssv2588348,nssv2588395,nssv2588353,nssv2588367,nssv2588344,nssv2588356,nssv2588385 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946795 1 144057186 144057939 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588401,nssv2588479,nssv2588419,nssv2588464,nssv2588423,nssv2588442,nssv2588416,nssv2588462,nssv2588429,nssv2588469,nssv2588439,nssv2588467,nssv2588432,nssv2588403,nssv2588402,nssv2588475,nssv2588405,nssv2588446,nssv2588481,nssv2588404,nssv2586716,nssv2588478,nssv2588427,nssv2588465,nssv2588421,nssv2588449,nssv2588425,nssv2588451,nssv2588420,nssv2588458,nssv2588441,nssv2588447,nssv2588411,nssv2588470,nssv2586717,nssv2588459,nssv2588424,nssv2588399,nssv2586722,nssv2588468,nssv2588434,nssv2588471,nssv2586720,nssv2588437,nssv2588435,nssv2588440,nssv2588406,nssv2588476,nssv2586721,nssv2588454,nssv2588415,nssv2588472,nssv2588428,nssv2588473,nssv2588413,nssv2588463,nssv2588422,nssv2588460,nssv2588480,nssv2588450,nssv2588414,nssv2586724,nssv2588412,nssv2588410,nssv2588408,nssv2588474,nssv2588417,nssv2588455,nssv2586719,nssv2588400,nssv2588418,nssv2588461,nssv2588426,nssv2588453,nssv2588430,nssv2588466,nssv2586723,nssv2588477,nssv2586718,nssv2588445,nssv2588438,nssv2588452,nssv2588431,nssv2588444,nssv2588407,nssv2588443,nssv2588448,nssv2588409,nssv2588433,nssv2588456,nssv2588457,nssv2588436 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946796 1 144057939 144058439 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586816,nssv2586777,nssv2586749,nssv2586752,nssv2586809,nssv2586763,nssv2586813,nssv2586781,nssv2586796,nssv2586770,nssv2586735,nssv2586784,nssv2586738,nssv2586762,nssv2586730,nssv2586748,nssv2586731,nssv2586774,nssv2586734,nssv2586785,nssv2586808,nssv2586769,nssv2586803,nssv2586794,nssv2586732,nssv2586773,nssv2586741,nssv2586765,nssv2586729,nssv2586768,nssv2586804,nssv2586807,nssv2586739,nssv2586811,nssv2586797,nssv2586764,nssv2586747,nssv2586760,nssv2586740,nssv2586805,nssv2586795,nssv2586771,nssv2586801,nssv2586751,nssv2586733,nssv2586789,nssv2586750,nssv2586806,nssv2586757,nssv2586761,nssv2586743,nssv2586755,nssv2586815,nssv2586725,nssv2586799,nssv2586792,nssv2586742,nssv2586791,nssv2586798,nssv2586779,nssv2586746,nssv2586786,nssv2586754,nssv2586810,nssv2586745,nssv2586782,nssv2586736,nssv2586790,nssv2586756,nssv2586788,nssv2586727,nssv2586787,nssv2586800,nssv2586780,nssv2586744,nssv2586776,nssv2586802,nssv2586772,nssv2586726,nssv2586759,nssv2586753,nssv2586814,nssv2586812,nssv2586767,nssv2586737,nssv2586758,nssv2586728,nssv2586766,nssv2586793,nssv2586775,nssv2586783,nssv2586778 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946797 1 144058439 144059241 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586907,nssv2586883,nssv2586830,nssv2586882,nssv2586824,nssv2586877,nssv2586905,nssv2586891,nssv2586845,nssv2586865,nssv2586842,nssv2586819,nssv2586853,nssv2586870,nssv2586861,nssv2586871,nssv2586841,nssv2586855,nssv2586900,nssv2586895,nssv2586832,nssv2586889,nssv2586821,nssv2586822,nssv2586828,nssv2586826,nssv2586908,nssv2586879,nssv2586858,nssv2586893,nssv2586831,nssv2586887,nssv2586834,nssv2586898,nssv2586899,nssv2586894,nssv2586840,nssv2586866,nssv2586849,nssv2586885,nssv2586854,nssv2586873,nssv2586850,nssv2586823,nssv2586833,nssv2586863,nssv2586837,nssv2586897,nssv2586835,nssv2586829,nssv2586851,nssv2586874,nssv2586847,nssv2586817,nssv2586906,nssv2586892,nssv2586860,nssv2586869,nssv2586902,nssv2586881,nssv2586836,nssv2586886,nssv2586843,nssv2586896,nssv2586839,nssv2586888,nssv2586846,nssv2586852,nssv2586825,nssv2586859,nssv2586820,nssv2586880,nssv2586857,nssv2586867,nssv2586901,nssv2586868,nssv2586903,nssv2586872,nssv2586904,nssv2586864,nssv2586848,nssv2586876,nssv2586838,nssv2586856,nssv2586827,nssv2586878,nssv2586844,nssv2586890,nssv2586862,nssv2586818,nssv2586875,nssv2586884 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946798 1 144059241 144060502 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2586940,nssv2586965,nssv2586932,nssv2586944,nssv2586942,nssv2586956,nssv2586998,nssv2586971,nssv2586945,nssv2586990,nssv2586927,nssv2586910,nssv2586953,nssv2586987,nssv2586934,nssv2586967,nssv2586931,nssv2586988,nssv2586952,nssv2586985,nssv2586923,nssv2586973,nssv2586922,nssv2586921,nssv2586992,nssv2586964,nssv2586949,nssv2586955,nssv2586929,nssv2586914,nssv2586995,nssv2586974,nssv2586941,nssv2586982,nssv2586916,nssv2586980,nssv2586991,nssv2586968,nssv2586919,nssv2586954,nssv2586993,nssv2586979,nssv2586950,nssv2586983,nssv2586925,nssv2586986,nssv2586999,nssv2586917,nssv2586912,nssv2586909,nssv2586946,nssv2586961,nssv2586928,nssv2586959,nssv2586936,nssv2586913,nssv2586926,nssv2586958,nssv2586943,nssv2586951,nssv2586918,nssv2586972,nssv2586939,nssv2586957,nssv2587000,nssv2586975,nssv2586996,nssv2586989,nssv2586933,nssv2586920,nssv2586997,nssv2586969,nssv2586935,nssv2586981,nssv2586930,nssv2586948,nssv2586937,nssv2586976,nssv2586924,nssv2586977,nssv2586938,nssv2586978,nssv2586911,nssv2586947,nssv2586994,nssv2586960,nssv2586915,nssv2586970,nssv2586962,nssv2586963,nssv2586984,nssv2586966 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946799 1 144060502 144061151 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2587010,nssv2588907,nssv2587008,nssv2588918,nssv2588935,nssv2588913,nssv2588938,nssv2588911,nssv2587014,nssv2588897,nssv2588936,nssv2588924,nssv2588889,nssv2588895,nssv2588931,nssv2588908,nssv2588874,nssv2587009,nssv2587015,nssv2588888,nssv2587004,nssv2588919,nssv2588879,nssv2588884,nssv2588882,nssv2588927,nssv2587003,nssv2588905,nssv2588890,nssv2588920,nssv2587011,nssv2588914,nssv2588937,nssv2588915,nssv2588940,nssv2588902,nssv2588877,nssv2588896,nssv2587016,nssv2588925,nssv2588885,nssv2588898,nssv2588933,nssv2587006,nssv2588883,nssv2588923,nssv2588875,nssv2588928,nssv2587018,nssv2588901,nssv2588892,nssv2588922,nssv2587019,nssv2588899,nssv2588939,nssv2588893,nssv2588932,nssv2588910,nssv2588878,nssv2588912,nssv2588886,nssv2587013,nssv2588876,nssv2588903,nssv2588934,nssv2588891,nssv2587017,nssv2588906,nssv2587020,nssv2588909,nssv2587023,nssv2587001,nssv2587021,nssv2588929,nssv2588873,nssv2588887,nssv2588881,nssv2588904,nssv2588880,nssv2588926,nssv2587007,nssv2588900,nssv2588872,nssv2587012,nssv2587022,nssv2587005,nssv2587002,nssv2588930,nssv2588916,nssv2588894,nssv2588917,nssv2588921 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv24 1 144061077 144091155 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv24 M 1 1 0 LOC100288142,LOC101929780,NBPF12 NA15510 nsv2688 1 144061077 144091155 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11025,nssv9591 M 9 2 0 LOC100288142,LOC101929780,NBPF12 NA15510,NA18507 nsv946800 1 144061151 144061651 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588951,nssv2588952,nssv2588943,nssv2588942,nssv2588947,nssv2588945,nssv2588950,nssv2588949,nssv2588948,nssv2588941,nssv2588944,nssv2588946 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946801 1 144061151 144062515 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588971,nssv2588953,nssv2588956,nssv2589015,nssv2588967,nssv2588986,nssv2589024,nssv2589010,nssv2588954,nssv2589003,nssv2589028,nssv2589012,nssv2588963,nssv2589000,nssv2588961,nssv2589002,nssv2588962,nssv2588991,nssv2588959,nssv2588997,nssv2588981,nssv2589011,nssv2589031,nssv2589001,nssv2588973,nssv2588987,nssv2588982,nssv2589009,nssv2588974,nssv2588985,nssv2588958,nssv2589017,nssv2588977,nssv2589021,nssv2589030,nssv2589018,nssv2589027,nssv2589022,nssv2588969,nssv2588994,nssv2588984,nssv2588979,nssv2588964,nssv2589016,nssv2588975,nssv2588976,nssv2588970,nssv2588998,nssv2589032,nssv2588990,nssv2588966,nssv2588995,nssv2588978,nssv2588993,nssv2589029,nssv2588996,nssv2588960,nssv2589020,nssv2588965,nssv2589013,nssv2589026,nssv2589006,nssv2588957,nssv2589014,nssv2588968,nssv2588999,nssv2589025,nssv2588992,nssv2588972,nssv2589008,nssv2589023,nssv2589019,nssv2588955,nssv2588983,nssv2588988,nssv2589004,nssv2589007,nssv2588989,nssv2588980,nssv2589005 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946802 1 144061651 144062515 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589036,nssv2589034,nssv2589040,nssv2589043,nssv2589042,nssv2589037,nssv2589035,nssv2589033,nssv2589039,nssv2589038,nssv2589044,nssv2589041 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946803 1 144062515 144063640 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588120,nssv2588098,nssv2589069,nssv2589089,nssv2589074,nssv2589093,nssv2588104,nssv2589091,nssv2589063,nssv2588086,nssv2589076,nssv2589099,nssv2589052,nssv2588090,nssv2589060,nssv2589071,nssv2588100,nssv2588121,nssv2589050,nssv2588114,nssv2588105,nssv2589092,nssv2589065,nssv2588093,nssv2589055,nssv2588110,nssv2589047,nssv2588099,nssv2588117,nssv2588085,nssv2588119,nssv2589085,nssv2588101,nssv2589095,nssv2589066,nssv2589098,nssv2589053,nssv2589096,nssv2588103,nssv2588118,nssv2589073,nssv2589072,nssv2589057,nssv2588095,nssv2588106,nssv2588111,nssv2589061,nssv2589097,nssv2589048,nssv2589090,nssv2589070,nssv2589079,nssv2588102,nssv2588115,nssv2588112,nssv2589077,nssv2588113,nssv2589075,nssv2589054,nssv2588091,nssv2589062,nssv2588096,nssv2589059,nssv2588094,nssv2589049,nssv2589045,nssv2589051,nssv2589080,nssv2588109,nssv2589088,nssv2589058,nssv2588089,nssv2589067,nssv2589078,nssv2589056,nssv2588088,nssv2588108,nssv2589086,nssv2589064,nssv2588092,nssv2589046,nssv2588097,nssv2588116,nssv2588087,nssv2588107,nssv2589087,nssv2589083,nssv2589082,nssv2589084,nssv2589068,nssv2589081,nssv2589094 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946804 1 144063640 144065725 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588154,nssv2588166,nssv2588212,nssv2588186,nssv2588197,nssv2588157,nssv2588132,nssv2588161,nssv2588143,nssv2588187,nssv2588208,nssv2588160,nssv2588204,nssv2588164,nssv2588196,nssv2588175,nssv2588139,nssv2588122,nssv2588198,nssv2588168,nssv2588199,nssv2588177,nssv2588131,nssv2588152,nssv2588126,nssv2588179,nssv2588150,nssv2588162,nssv2588144,nssv2588172,nssv2588130,nssv2588202,nssv2588127,nssv2588156,nssv2588194,nssv2588173,nssv2588133,nssv2588163,nssv2588153,nssv2588155,nssv2588138,nssv2588158,nssv2588193,nssv2588149,nssv2588195,nssv2588148,nssv2588192,nssv2588185,nssv2588209,nssv2588169,nssv2588201,nssv2588206,nssv2588128,nssv2588167,nssv2588125,nssv2588203,nssv2588129,nssv2588174,nssv2588211,nssv2588181,nssv2588141,nssv2588183,nssv2588134,nssv2588145,nssv2588146,nssv2588190,nssv2588124,nssv2588176,nssv2588142,nssv2588171,nssv2588147,nssv2588213,nssv2588205,nssv2588191,nssv2588123,nssv2588207,nssv2588151,nssv2588188,nssv2588136,nssv2588159,nssv2588137,nssv2588170,nssv2588200,nssv2588178,nssv2588140,nssv2588182,nssv2588135,nssv2588165,nssv2588189,nssv2588184,nssv2588210,nssv2588180 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946805 1 144065725 144066836 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588246,nssv2589205,nssv2589228,nssv2589183,nssv2589215,nssv2589218,nssv2588235,nssv2589200,nssv2588239,nssv2589192,nssv2588221,nssv2589204,nssv2588217,nssv2589201,nssv2588226,nssv2589223,nssv2589210,nssv2589187,nssv2589217,nssv2588253,nssv2589213,nssv2589184,nssv2588215,nssv2589181,nssv2589209,nssv2589188,nssv2589211,nssv2589203,nssv2588231,nssv2588237,nssv2588232,nssv2589197,nssv2588223,nssv2588249,nssv2589220,nssv2588250,nssv2589221,nssv2589196,nssv2588216,nssv2588214,nssv2588230,nssv2589206,nssv2589212,nssv2588241,nssv2588218,nssv2589222,nssv2589208,nssv2589189,nssv2588243,nssv2589180,nssv2589214,nssv2589207,nssv2588227,nssv2588248,nssv2588224,nssv2589182,nssv2588222,nssv2589195,nssv2588242,nssv2588255,nssv2589216,nssv2589198,nssv2588238,nssv2589199,nssv2588233,nssv2589226,nssv2588236,nssv2589194,nssv2588225,nssv2589190,nssv2588229,nssv2589193,nssv2588245,nssv2588251,nssv2588228,nssv2589202,nssv2588220,nssv2589219,nssv2589225,nssv2589185,nssv2588234,nssv2588254,nssv2589227,nssv2588247,nssv2589224,nssv2588244,nssv2588219,nssv2588240,nssv2588252,nssv2589186,nssv2589191 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946807 1 144066836 144068188 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589240,nssv2589291,nssv2589320,nssv2589303,nssv2589242,nssv2589271,nssv2589265,nssv2589293,nssv2589248,nssv2589298,nssv2589237,nssv2589280,nssv2589239,nssv2589238,nssv2589314,nssv2589300,nssv2589261,nssv2589279,nssv2589260,nssv2589273,nssv2589259,nssv2589231,nssv2589263,nssv2589275,nssv2589266,nssv2589283,nssv2589319,nssv2589276,nssv2589313,nssv2589292,nssv2589318,nssv2589267,nssv2589312,nssv2589305,nssv2589251,nssv2589274,nssv2589262,nssv2589306,nssv2589255,nssv2589282,nssv2589233,nssv2589301,nssv2589247,nssv2589241,nssv2589316,nssv2589297,nssv2589317,nssv2589284,nssv2589232,nssv2589295,nssv2589249,nssv2589296,nssv2589243,nssv2589277,nssv2589311,nssv2589230,nssv2589245,nssv2589234,nssv2589257,nssv2589307,nssv2589272,nssv2589281,nssv2589246,nssv2589308,nssv2589236,nssv2589235,nssv2589250,nssv2589309,nssv2589258,nssv2589294,nssv2589315,nssv2589290,nssv2589270,nssv2589287,nssv2589256,nssv2589289,nssv2589269,nssv2589288,nssv2589254,nssv2589278,nssv2589244,nssv2589286,nssv2589252,nssv2589304,nssv2589253,nssv2589302,nssv2589285,nssv2589268,nssv2589299,nssv2589264,nssv2589310 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946808 1 144068188 144068858 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589342,nssv2589367,nssv2589405,nssv2589375,nssv2589341,nssv2589358,nssv2589401,nssv2589365,nssv2589350,nssv2589363,nssv2589399,nssv2589357,nssv2589323,nssv2589362,nssv2589332,nssv2589373,nssv2589351,nssv2589355,nssv2589340,nssv2589364,nssv2589353,nssv2589356,nssv2589336,nssv2589384,nssv2589337,nssv2589348,nssv2589393,nssv2589390,nssv2589395,nssv2589370,nssv2589392,nssv2589391,nssv2589333,nssv2589354,nssv2589334,nssv2589388,nssv2589327,nssv2589402,nssv2589344,nssv2589366,nssv2589398,nssv2589322,nssv2589404,nssv2589379,nssv2589394,nssv2589380,nssv2589400,nssv2589377,nssv2589346,nssv2589389,nssv2589339,nssv2589378,nssv2589411,nssv2589371,nssv2589328,nssv2589385,nssv2589331,nssv2589410,nssv2589329,nssv2589321,nssv2589335,nssv2589369,nssv2589409,nssv2589349,nssv2589343,nssv2589407,nssv2589330,nssv2589382,nssv2589408,nssv2589359,nssv2589338,nssv2589381,nssv2589347,nssv2589387,nssv2589324,nssv2589386,nssv2589326,nssv2589403,nssv2589325,nssv2589372,nssv2589397,nssv2589345,nssv2589396,nssv2589383,nssv2589361,nssv2589412,nssv2589376,nssv2589368,nssv2589352,nssv2589406,nssv2589360,nssv2589374 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946809 1 144068858 144070268 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589487,nssv2589477,nssv2589486,nssv2590426,nssv2589424,nssv2589443,nssv2589428,nssv2589449,nssv2590427,nssv2589476,nssv2589441,nssv2589451,nssv2590416,nssv2589467,nssv2589432,nssv2589482,nssv2589433,nssv2589470,nssv2590412,nssv2590423,nssv2589417,nssv2589478,nssv2589484,nssv2589456,nssv2589425,nssv2589479,nssv2590421,nssv2589468,nssv2589434,nssv2589469,nssv2589414,nssv2589463,nssv2589437,nssv2589436,nssv2589416,nssv2589447,nssv2590420,nssv2589465,nssv2589431,nssv2589459,nssv2589438,nssv2589473,nssv2590415,nssv2589454,nssv2589485,nssv2589460,nssv2589423,nssv2589480,nssv2590424,nssv2589452,nssv2589419,nssv2589461,nssv2590414,nssv2590418,nssv2589420,nssv2589457,nssv2590428,nssv2589445,nssv2589435,nssv2589481,nssv2589418,nssv2590422,nssv2589427,nssv2589466,nssv2589429,nssv2589446,nssv2589422,nssv2590419,nssv2590425,nssv2589471,nssv2589430,nssv2589455,nssv2589426,nssv2589472,nssv2589415,nssv2589474,nssv2589421,nssv2589440,nssv2590413,nssv2589475,nssv2589442,nssv2589453,nssv2589444,nssv2589450,nssv2589483,nssv2589462,nssv2589458,nssv2590417,nssv2589413,nssv2589464,nssv2589448,nssv2589439 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946810 1 144070268 144071471 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588840,nssv2588790,nssv2590460,nssv2588810,nssv2590448,nssv2590468,nssv2588819,nssv2588805,nssv2588836,nssv2588809,nssv2588833,nssv2588814,nssv2588822,nssv2590429,nssv2590430,nssv2588801,nssv2590446,nssv2590466,nssv2588828,nssv2588812,nssv2590450,nssv2588794,nssv2588832,nssv2588804,nssv2590436,nssv2590455,nssv2588820,nssv2588834,nssv2590435,nssv2590464,nssv2590453,nssv2588806,nssv2588827,nssv2590462,nssv2588837,nssv2588793,nssv2590432,nssv2588817,nssv2590441,nssv2588830,nssv2590437,nssv2588796,nssv2590445,nssv2588815,nssv2590449,nssv2588829,nssv2588824,nssv2588798,nssv2590443,nssv2588797,nssv2590451,nssv2588799,nssv2588823,nssv2588795,nssv2590442,nssv2588791,nssv2590444,nssv2588792,nssv2590454,nssv2588811,nssv2590431,nssv2588838,nssv2590458,nssv2588813,nssv2588821,nssv2590465,nssv2588826,nssv2588802,nssv2590461,nssv2590459,nssv2588825,nssv2588818,nssv2590434,nssv2590467,nssv2590433,nssv2590456,nssv2590439,nssv2590452,nssv2590438,nssv2588831,nssv2590440,nssv2588803,nssv2588839,nssv2588807,nssv2590447,nssv2588816,nssv2590457,nssv2590463,nssv2588800,nssv2588835,nssv2588808,nssv2588789 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2248028 1 144071380 144077886 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4947681 M 1 0 1 LOC100288142,LOC101929780,NBPF12 NA18507 nsv946811 1 144071471 144072217 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588862,nssv2589828,nssv2588863,nssv2589814,nssv2588867,nssv2588843,nssv2589796,nssv2589816,nssv2589852,nssv2589818,nssv2589849,nssv2589813,nssv2588861,nssv2589821,nssv2588848,nssv2588852,nssv2588866,nssv2589826,nssv2588858,nssv2588846,nssv2589853,nssv2589839,nssv2589806,nssv2589824,nssv2588871,nssv2588850,nssv2588844,nssv2589846,nssv2588869,nssv2589838,nssv2589851,nssv2589832,nssv2589805,nssv2589822,nssv2589854,nssv2589830,nssv2589798,nssv2588842,nssv2589799,nssv2589833,nssv2589848,nssv2589803,nssv2588849,nssv2589841,nssv2589855,nssv2589843,nssv2588870,nssv2589834,nssv2588864,nssv2589831,nssv2588865,nssv2589809,nssv2589797,nssv2588841,nssv2589802,nssv2589807,nssv2588851,nssv2588853,nssv2589856,nssv2589820,nssv2588868,nssv2589819,nssv2588857,nssv2589829,nssv2588855,nssv2588847,nssv2588845,nssv2589842,nssv2589808,nssv2589823,nssv2588860,nssv2589800,nssv2589801,nssv2589835,nssv2588859,nssv2589845,nssv2588856,nssv2589825,nssv2588854,nssv2589844,nssv2589847,nssv2589810,nssv2589850,nssv2589840,nssv2589811,nssv2589837,nssv2589836,nssv2589812,nssv2589815,nssv2589817,nssv2589827,nssv2589804 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946812 1 144072217 144073020 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589884,nssv2589895,nssv2589888,nssv2589903,nssv2589891,nssv2589912,nssv2589883,nssv2589927,nssv2589897,nssv2589908,nssv2589864,nssv2589905,nssv2589870,nssv2589926,nssv2589946,nssv2589929,nssv2589881,nssv2589907,nssv2589876,nssv2589917,nssv2589945,nssv2589935,nssv2589885,nssv2589920,nssv2589942,nssv2589923,nssv2589877,nssv2589915,nssv2589898,nssv2589911,nssv2589940,nssv2589865,nssv2589900,nssv2589904,nssv2589873,nssv2589918,nssv2589889,nssv2589861,nssv2589944,nssv2589862,nssv2589886,nssv2589919,nssv2589878,nssv2589925,nssv2589893,nssv2589924,nssv2589872,nssv2589938,nssv2589860,nssv2589906,nssv2589871,nssv2589933,nssv2589882,nssv2589916,nssv2589875,nssv2589936,nssv2589866,nssv2589892,nssv2589941,nssv2589930,nssv2589943,nssv2589857,nssv2589939,nssv2589932,nssv2589880,nssv2589913,nssv2589859,nssv2589931,nssv2589879,nssv2589928,nssv2589894,nssv2589869,nssv2589887,nssv2589867,nssv2589948,nssv2589896,nssv2589863,nssv2589910,nssv2589901,nssv2589868,nssv2589890,nssv2589921,nssv2589947,nssv2589914,nssv2589874,nssv2589934,nssv2589937,nssv2589899,nssv2589909,nssv2589858,nssv2589922,nssv2589902 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946813 1 144073020 144073773 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589952,nssv2590030,nssv2589983,nssv2590017,nssv2589979,nssv2590013,nssv2589986,nssv2589994,nssv2589990,nssv2590029,nssv2590039,nssv2589953,nssv2589964,nssv2590002,nssv2589977,nssv2590011,nssv2590040,nssv2590014,nssv2589976,nssv2590028,nssv2589989,nssv2590021,nssv2590033,nssv2589991,nssv2589965,nssv2590012,nssv2589967,nssv2590006,nssv2590037,nssv2589961,nssv2589958,nssv2590027,nssv2589974,nssv2590020,nssv2589959,nssv2590016,nssv2590032,nssv2590008,nssv2589963,nssv2590009,nssv2589970,nssv2590018,nssv2589992,nssv2590007,nssv2589985,nssv2590015,nssv2590036,nssv2590001,nssv2589966,nssv2589987,nssv2589972,nssv2590004,nssv2589969,nssv2589960,nssv2589951,nssv2589998,nssv2589971,nssv2590022,nssv2589975,nssv2589957,nssv2590035,nssv2589954,nssv2589980,nssv2589949,nssv2589968,nssv2590000,nssv2589973,nssv2589995,nssv2589978,nssv2590025,nssv2589956,nssv2590026,nssv2589962,nssv2590003,nssv2589981,nssv2589997,nssv2590038,nssv2590010,nssv2589993,nssv2589999,nssv2590031,nssv2589950,nssv2590034,nssv2590019,nssv2589982,nssv2589996,nssv2589955,nssv2589984,nssv2589988,nssv2590023,nssv2590005,nssv2590024 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv3n6 1 144073244 144077969 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159326,nsv160059,nsv160266 M 24 LOC100288142,LOC101929780,NBPF12 nsv946814 1 144073773 144074273 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590070,nssv2591043,nssv2590077,nssv2591032,nssv2590085,nssv2590053,nssv2590054,nssv2590076,nssv2590044,nssv2590099,nssv2590060,nssv2590045,nssv2590071,nssv2590100,nssv2591049,nssv2591044,nssv2591051,nssv2590096,nssv2590067,nssv2590080,nssv2590050,nssv2590046,nssv2591048,nssv2591030,nssv2590057,nssv2591040,nssv2590075,nssv2591028,nssv2591047,nssv2591034,nssv2591053,nssv2591046,nssv2591052,nssv2590091,nssv2590051,nssv2591035,nssv2590073,nssv2590094,nssv2590069,nssv2590101,nssv2590074,nssv2591033,nssv2590066,nssv2590079,nssv2590063,nssv2591029,nssv2590055,nssv2590042,nssv2590048,nssv2590093,nssv2590062,nssv2590088,nssv2590081,nssv2590087,nssv2590058,nssv2590095,nssv2590065,nssv2591045,nssv2590056,nssv2590049,nssv2590082,nssv2590086,nssv2590064,nssv2590052,nssv2590078,nssv2590103,nssv2591056,nssv2591037,nssv2590047,nssv2590089,nssv2590061,nssv2590041,nssv2590068,nssv2591038,nssv2590084,nssv2590102,nssv2591050,nssv2591042,nssv2591054,nssv2590098,nssv2590072,nssv2590090,nssv2591055,nssv2591031,nssv2590043,nssv2591036,nssv2590059,nssv2590092,nssv2591039,nssv2591041,nssv2590083,nssv2590097 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946815 1 144074273 144075565 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591086,nssv2591105,nssv2591081,nssv2591104,nssv2591066,nssv2591093,nssv2591071,nssv2591119,nssv2591136,nssv2591122,nssv2591143,nssv2591116,nssv2591076,nssv2591121,nssv2591073,nssv2591097,nssv2591059,nssv2591095,nssv2591134,nssv2591120,nssv2591078,nssv2591142,nssv2591088,nssv2591106,nssv2591074,nssv2591083,nssv2591127,nssv2591109,nssv2591070,nssv2591084,nssv2591140,nssv2591118,nssv2591064,nssv2591057,nssv2591129,nssv2591113,nssv2591067,nssv2591094,nssv2591082,nssv2591100,nssv2591128,nssv2591138,nssv2591135,nssv2591098,nssv2591061,nssv2591117,nssv2591068,nssv2591114,nssv2591063,nssv2591126,nssv2591069,nssv2591107,nssv2591072,nssv2591101,nssv2591065,nssv2591087,nssv2591079,nssv2591124,nssv2591132,nssv2591141,nssv2591075,nssv2591123,nssv2591147,nssv2591091,nssv2591089,nssv2591096,nssv2591133,nssv2591103,nssv2591146,nssv2591110,nssv2591130,nssv2591145,nssv2591144,nssv2591099,nssv2591062,nssv2591080,nssv2591085,nssv2591090,nssv2591077,nssv2591108,nssv2591131,nssv2591102,nssv2591060,nssv2591112,nssv2591058,nssv2591115,nssv2591139,nssv2591137,nssv2591111,nssv2591092,nssv2591125 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv160210 1 144074795 144077969 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178788 M 24 LOC100288142,LOC101929780,NBPF12 nsv946817 1 144075565 144079318 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588484,nssv2588498,nssv2591166,nssv2588526,nssv2591162,nssv2588528,nssv2588544,nssv2588502,nssv2591163,nssv2591157,nssv2588497,nssv2588508,nssv2588488,nssv2588532,nssv2588496,nssv2588494,nssv2588483,nssv2588495,nssv2591173,nssv2588530,nssv2588489,nssv2588509,nssv2591169,nssv2588501,nssv2588500,nssv2591149,nssv2591155,nssv2588527,nssv2591167,nssv2588535,nssv2588492,nssv2588511,nssv2588547,nssv2588516,nssv2591152,nssv2588491,nssv2588486,nssv2588522,nssv2588485,nssv2588537,nssv2588543,nssv2588525,nssv2588545,nssv2588519,nssv2591158,nssv2588534,nssv2588539,nssv2588505,nssv2591161,nssv2588524,nssv2588538,nssv2588512,nssv2591172,nssv2591150,nssv2588493,nssv2588531,nssv2591168,nssv2588520,nssv2588499,nssv2588514,nssv2591151,nssv2588517,nssv2588490,nssv2591153,nssv2591170,nssv2588536,nssv2591165,nssv2588515,nssv2591164,nssv2588533,nssv2588482,nssv2588504,nssv2588487,nssv2591154,nssv2591159,nssv2588523,nssv2591171,nssv2588506,nssv2588540,nssv2591160,nssv2588546,nssv2588507,nssv2591156,nssv2588518,nssv2588541,nssv2588521,nssv2588542,nssv2588529,nssv2588510,nssv2588503,nssv2588513 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv160417 1 144076115 144077671 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178995 M 24 LOC100288142,LOC101929780,NBPF12 nsv946818 1 144079318 144079977 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2588561,nssv2589558,nssv2589547,nssv2588549,nssv2589548,nssv2589512,nssv2589504,nssv2589500,nssv2588563,nssv2589529,nssv2589498,nssv2589514,nssv2588550,nssv2589507,nssv2588555,nssv2589517,nssv2589492,nssv2589505,nssv2589552,nssv2589520,nssv2589560,nssv2589527,nssv2589493,nssv2589542,nssv2588556,nssv2589541,nssv2589501,nssv2589563,nssv2588557,nssv2589532,nssv2589549,nssv2589508,nssv2589550,nssv2589522,nssv2589546,nssv2589530,nssv2588558,nssv2589538,nssv2589562,nssv2589518,nssv2589543,nssv2589516,nssv2589555,nssv2589515,nssv2589502,nssv2588548,nssv2589494,nssv2589533,nssv2589491,nssv2589531,nssv2589559,nssv2589561,nssv2588552,nssv2589557,nssv2589488,nssv2589511,nssv2588560,nssv2589535,nssv2589556,nssv2589524,nssv2589544,nssv2589513,nssv2589497,nssv2589528,nssv2588562,nssv2589510,nssv2588551,nssv2589519,nssv2588554,nssv2589536,nssv2589495,nssv2589554,nssv2589545,nssv2589553,nssv2588559,nssv2589526,nssv2589551,nssv2589539,nssv2589490,nssv2589523,nssv2588553,nssv2589506,nssv2589489,nssv2589509,nssv2589534,nssv2589537,nssv2589496,nssv2589499,nssv2589521,nssv2589525,nssv2589540,nssv2589503 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946819 1 144079977 144082730 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589573,nssv2589598,nssv2589577,nssv2589612,nssv2589579,nssv2589597,nssv2589640,nssv2589608,nssv2589569,nssv2589616,nssv2589574,nssv2589564,nssv2589575,nssv2589603,nssv2589641,nssv2589620,nssv2589593,nssv2589617,nssv2589566,nssv2589599,nssv2589576,nssv2589600,nssv2589565,nssv2589623,nssv2589580,nssv2589596,nssv2589643,nssv2589607,nssv2589584,nssv2589622,nssv2589583,nssv2589605,nssv2589635,nssv2589618,nssv2589568,nssv2589633,nssv2589595,nssv2589614,nssv2589588,nssv2589628,nssv2589586,nssv2589615,nssv2589578,nssv2589627,nssv2589567,nssv2589610,nssv2589571,nssv2589591,nssv2589638,nssv2589602,nssv2589639,nssv2589604,nssv2589637,nssv2589606,nssv2589582,nssv2589609,nssv2589592,nssv2589590,nssv2589634,nssv2589624,nssv2589636,nssv2589611,nssv2589642,nssv2589587,nssv2589572,nssv2589632,nssv2589581,nssv2589594,nssv2589585,nssv2589601,nssv2589570,nssv2589626,nssv2589589,nssv2589629,nssv2589625,nssv2589621,nssv2589619,nssv2589613,nssv2589631,nssv2589630 M 97 10 0 LOC100288142,LOC101929780,NBPF12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2699 1 144094032 144128148 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3223 M 9 1 0 HFE2 NA12878 esv5534 1 144145847 144147262 CNV loss Ahn_et_al_2009 19470904 Sequencing essv27975 M 1 0 0 "" nsv8103 1 144182877 144186392 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv20742,nssv24301 M 31 2 0 ANKRD34A NA18502,NA19221 esv33401 1 144183079 144185322 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv100051 M 51 1 0 ANKRD34A 22086 nsv831381 1 144185515 144361868 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449839 M 95 1 0 ANKRD34A,ANKRD35,GNRHR2,ITGA10,LIX1L,MIR6736,NUDT17,PEX11B,PIAS3,POLR3C,RBM8A,RNF115 nsv2710 1 144218975 144251802 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5872 M 9 1 0 GNRHR2,ITGA10,PEX11B,RBM8A NA19129 nsv946264 1 144220495 144222566 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789731,nssv1789730,nssv1789734,nssv1789726,nssv1789727,nssv1789725,nssv1789728,nssv1789733,nssv1789732,nssv1789729,nssv1789735 M 97 10 0 GNRHR2,RBM8A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv32826 1 144272574 144273821 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv94065 M 51 1 0 ANKRD35 21802 nsv946265 1 144277399 144278424 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1789741,nssv1789782,nssv1789742,nssv1791063,nssv1789757,nssv1791030,nssv1791054,nssv1791042,nssv1791049,nssv1791062,nssv1789758,nssv1789784,nssv1789754,nssv1789783,nssv1789740,nssv1789785,nssv1789751,nssv1789788,nssv1789749,nssv1789763,nssv1789765,nssv1791056,nssv1791053,nssv1791040,nssv1789755,nssv1789779,nssv1789746,nssv1789778,nssv1789750,nssv1789769,nssv1789747,nssv1791038,nssv1789761,nssv1789736,nssv1791051,nssv1791055,nssv1789745,nssv1791064,nssv1789748,nssv1791043,nssv1791046,nssv1791034,nssv1789738,nssv1791029,nssv1789744,nssv1789792,nssv1789737,nssv1789771,nssv1789767,nssv1789776,nssv1789760,nssv1791059,nssv1791045,nssv1789759,nssv1789764,nssv1789781,nssv1789739,nssv1791044,nssv1789752,nssv1791036,nssv1789743,nssv1791028,nssv1791050,nssv1791037,nssv1789756,nssv1789766,nssv1791052,nssv1791032,nssv1791047,nssv1789790,nssv1791048,nssv1789794,nssv1789753,nssv1791031,nssv1789795,nssv1789762,nssv1791035,nssv1791033,nssv1789786,nssv1789774,nssv1789777,nssv1789775,nssv1791058,nssv1789780,nssv1791057,nssv1789768,nssv1789793,nssv1791039,nssv1791061,nssv1789789,nssv1789791,nssv1791041,nssv1789772,nssv1789787,nssv1791060,nssv1789773,nssv1789770 M 97 10 0 ANKRD35 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1015025 1 144294506 144503409 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498322 M 29084 1 0 CD160,GPR89A,MIR6736,NUDT17,PDZK1,PIAS3,POLR3C,RNF115 esv2758967 1 144308473 145164166 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756862,esv2757753,esv2757752 M 270 6 1 CD160,FMO5,GPR89A,GPR89C,LOC728989,NBPF11,NBPF13P,NBPF24,PDIA3P1,PDZK1,PDZK1P1,POLR3C,PRKAB2,RNF115 NA18913,NA18960,NA18992,NA19202,NA19203,NA19204,NA19205 dgv331n100 1 144319336 144503409 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000034,nsv1011379,nsv1012276 M 29084 3 0 CD160,GPR89A,PDZK1,POLR3C,RNF115 dgv531n54 1 144321567 144456849 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547660,nsv547664 M 17421 0 5 CD160,PDZK1,POLR3C,RNF115 HGDP00766 dgv33n27 1 144321567 144458820 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463450,nsv463472 M 1557 0 2 CD160,PDZK1,POLR3C,RNF115 HGDP00766,NINDS_110 esv3894089 1 144321567 144474316 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796923,essv25796801,essv25796560 M 3017 0 3 CD160,PDZK1,POLR3C,RNF115 nsv946266 1 144322918 144334186 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791074,nssv1791069,nssv1791071,nssv1791075,nssv1791068,nssv1791070,nssv1791067,nssv1791066,nssv1791072,nssv1791065,nssv1791073 M 97 10 0 RNF115 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv428224 1 144324600 145020542 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv451442,nssv451431,nssv451376,nssv451453,nssv451365,nssv451387 M 62 6 0 CD160,GPR89A,GPR89C,LOC728989,NBPF11,NBPF24,PDZK1,PDZK1P1,RNF115 HGDP00449,HGDP00463,HGDP01089,HGDP01093,HGDP01094,NA18916 dgv532n54 1 144332924 144521852 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547669,nsv547661,nsv547666 M 17421 3 0 CD160,GPR89A,PDZK1,RNF115 nsv831392 1 144333285 144514034 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449851 M 95 1 0 CD160,GPR89A,PDZK1,RNF115 dgv332n100 1 144337051 144503409 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004444,nsv1013024 M 29084 19 6 CD160,GPR89A,PDZK1,RNF115 nsv547662 1 144337336 144392841 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723067 M 17421 0 1 RNF115 dgv533n54 1 144337336 144458820 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547672,nsv547668,nsv547667,nsv547663 M 17421 4 0 CD160,PDZK1,RNF115 HGDP01406 nsv470735 1 144337336 144458820 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547765,nssv547766 M 443 2 0 CD160,PDZK1,RNF115 HGDP00449,HGDP01406 nsv547665 1 144337336 144458820 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173138,nssv723073,nssv1173137,nssv723074,nssv723075 M 17421 2 3 CD160,PDZK1,RNF115 HGDP00993,NINDS_110 nsv818411 1 144337336 144458820 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417650 M 112 0 1 CD160,PDZK1,RNF115 NA18992 nsv998178 1 144353053 144503409 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498745 M 29084 0 1 CD160,GPR89A,PDZK1,RNF115 nsv469752 1 144356396 144506964 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1672632 M 265 0 1 CD160,GPR89A,PDZK1,RNF115 nsv547670 1 144367932 144456849 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723080 M 17421 0 1 CD160,PDZK1,RNF115 nsv463483 1 144369065 144392841 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539503 M 1557 0 1 RNF115 1782681247_A nsv547671 1 144369065 144392841 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173139 M 17421 0 1 RNF115 1782681247_A nsv463494 1 144369065 144458820 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539514 M 1557 1 0 CD160,PDZK1,RNF115 HGDP01406 dgv71n67 1 144431583 144433803 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824464,nsv824476 M 31 0 2 "" NA18947,NA18972 nsv946271 1 144477262 144498183 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788815,nssv1788814,nssv1788806,nssv1788807,nssv1788805,nssv1788811,nssv1788810,nssv1788808,nssv1788813,nssv1788812,nssv1788809 M 97 10 0 GPR89A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946272 1 144527871 144537187 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1788834,nssv1790452,nssv1788818,nssv1788854,nssv1788830,nssv1790445,nssv1790442,nssv1788864,nssv1790433,nssv1788861,nssv1788838,nssv1788849,nssv1788841,nssv1788852,nssv1788820,nssv1788871,nssv1788817,nssv1788868,nssv1790438,nssv1790447,nssv1788829,nssv1790415,nssv1788825,nssv1788855,nssv1788819,nssv1790423,nssv1788835,nssv1788859,nssv1790437,nssv1788846,nssv1788831,nssv1790430,nssv1788826,nssv1790412,nssv1790439,nssv1788853,nssv1788845,nssv1788848,nssv1788828,nssv1788843,nssv1788847,nssv1788850,nssv1790435,nssv1788816,nssv1788832,nssv1790451,nssv1788822,nssv1788870,nssv1788840,nssv1790428,nssv1790434,nssv1788857,nssv1788823,nssv1790414,nssv1788836,nssv1790448,nssv1790441,nssv1790418,nssv1788833,nssv1790450,nssv1790440,nssv1790416,nssv1788821,nssv1788851,nssv1788824,nssv1788869,nssv1788844,nssv1790429,nssv1790436,nssv1788839,nssv1788827,nssv1790426,nssv1788837,nssv1790417,nssv1790444,nssv1788863,nssv1788862,nssv1790446,nssv1790443,nssv1788858,nssv1790449,nssv1788866,nssv1790424,nssv1788842,nssv1790425,nssv1790413,nssv1788856,nssv1788860,nssv1788865,nssv1788867,nssv1790419,nssv1790432,nssv1790427,nssv1790421,nssv1790422,nssv1790431,nssv1790420 M 97 10 0 GPR89A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946273 1 144539553 144542917 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790482,nssv1790505,nssv1790465,nssv1790543,nssv1790534,nssv1790524,nssv1790459,nssv1790496,nssv1790471,nssv1790523,nssv1790474,nssv1790498,nssv1790462,nssv1790544,nssv1790463,nssv1790495,nssv1790457,nssv1790516,nssv1790481,nssv1790502,nssv1790466,nssv1790542,nssv1790535,nssv1790520,nssv1790460,nssv1790549,nssv1790475,nssv1790512,nssv1790458,nssv1790506,nssv1790536,nssv1790503,nssv1790454,nssv1790479,nssv1790467,nssv1790508,nssv1790478,nssv1790483,nssv1790456,nssv1790476,nssv1790533,nssv1790493,nssv1790464,nssv1790515,nssv1790484,nssv1790527,nssv1790472,nssv1790509,nssv1790530,nssv1790491,nssv1790477,nssv1790518,nssv1790532,nssv1790511,nssv1790455,nssv1790486,nssv1790468,nssv1790494,nssv1790469,nssv1790507,nssv1790537,nssv1790545,nssv1790531,nssv1790548,nssv1790539,nssv1790526,nssv1790461,nssv1790488,nssv1790538,nssv1790547,nssv1790473,nssv1790525,nssv1790470,nssv1790504,nssv1790489,nssv1790492,nssv1790480,nssv1790453,nssv1790541,nssv1790490,nssv1790514,nssv1790487,nssv1790485,nssv1790517,nssv1790521,nssv1790513,nssv1790500,nssv1790546,nssv1790540,nssv1790497,nssv1790501,nssv1790522,nssv1790499,nssv1790529,nssv1790519,nssv1790510,nssv1790528 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946274 1 144612001 144630274 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790556,nssv1790551,nssv1790552,nssv1790560,nssv1790557,nssv1790554,nssv1790559,nssv1790558,nssv1790553,nssv1790555,nssv1790550 M 97 10 0 GPR89C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8114 1 144653490 144655438 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22767 M 31 0 1 PDZK1P1 NA19173 nsv946275 1 144656887 144695132 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790647,nssv1790635,nssv1790570,nssv1790618,nssv1790590,nssv1790588,nssv1790567,nssv1790631,nssv1790582,nssv1790625,nssv1790579,nssv1790627,nssv1790565,nssv1790595,nssv1790571,nssv1790591,nssv1790589,nssv1790632,nssv1790573,nssv1790651,nssv1790643,nssv1790652,nssv1790572,nssv1790606,nssv1790583,nssv1790637,nssv1790641,nssv1790605,nssv1790568,nssv1790607,nssv1790644,nssv1790634,nssv1790563,nssv1790650,nssv1790574,nssv1790609,nssv1790638,nssv1790587,nssv1790640,nssv1790603,nssv1790575,nssv1790614,nssv1790564,nssv1790620,nssv1790592,nssv1790654,nssv1790580,nssv1790624,nssv1790566,nssv1790628,nssv1790585,nssv1790608,nssv1790642,nssv1790613,nssv1790639,nssv1790584,nssv1790577,nssv1790616,nssv1790569,nssv1790604,nssv1790645,nssv1790610,nssv1790581,nssv1790619,nssv1790576,nssv1790599,nssv1790646,nssv1790623,nssv1790578,nssv1790617,nssv1790562,nssv1790653,nssv1790586,nssv1790626,nssv1790633,nssv1790656,nssv1790615,nssv1790655,nssv1790596,nssv1790601,nssv1790612,nssv1790594,nssv1790636,nssv1790611,nssv1790649,nssv1790622,nssv1790648,nssv1790621,nssv1790600,nssv1790598,nssv1790657,nssv1790629,nssv1790630,nssv1790597,nssv1790561,nssv1790593,nssv1790602 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8125 1 144691312 144702533 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23085 M 31 0 1 "" NA19173 nsv946276 1 144695132 144700095 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790678,nssv1790718,nssv1791657,nssv1790705,nssv1790663,nssv1790704,nssv1791655,nssv1790685,nssv1790660,nssv1790695,nssv1790664,nssv1790706,nssv1791661,nssv1790658,nssv1791653,nssv1790715,nssv1790676,nssv1790703,nssv1790662,nssv1791645,nssv1790683,nssv1790692,nssv1790661,nssv1791651,nssv1790679,nssv1791646,nssv1790667,nssv1790702,nssv1790665,nssv1791650,nssv1790680,nssv1790700,nssv1791660,nssv1790717,nssv1790671,nssv1790713,nssv1791658,nssv1790707,nssv1790672,nssv1790681,nssv1790689,nssv1790701,nssv1790677,nssv1791647,nssv1790670,nssv1790711,nssv1790669,nssv1790716,nssv1791652,nssv1790688,nssv1790682,nssv1790710,nssv1790659,nssv1790691,nssv1790687,nssv1790684,nssv1790666,nssv1791644,nssv1790674,nssv1790714,nssv1790668,nssv1791648,nssv1791656,nssv1790696,nssv1790686,nssv1790698,nssv1791659,nssv1790709,nssv1790675,nssv1790719,nssv1790673,nssv1791649,nssv1791654,nssv1790693,nssv1790699,nssv1790712,nssv1790690,nssv1790694,nssv1790708,nssv1790697 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946277 1 144700095 144702486 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791742,nssv1791717,nssv1791671,nssv1791695,nssv1791748,nssv1790830,nssv1791665,nssv1791689,nssv1791744,nssv1791720,nssv1791663,nssv1791727,nssv1791678,nssv1791713,nssv1791687,nssv1791723,nssv1791747,nssv1791701,nssv1791668,nssv1791722,nssv1791680,nssv1791702,nssv1791667,nssv1791694,nssv1791669,nssv1791697,nssv1791666,nssv1791718,nssv1791674,nssv1791703,nssv1791677,nssv1791734,nssv1791672,nssv1791719,nssv1791673,nssv1791712,nssv1791690,nssv1791725,nssv1791746,nssv1791731,nssv1791684,nssv1791754,nssv1791675,nssv1791685,nssv1791670,nssv1791736,nssv1791745,nssv1791752,nssv1791664,nssv1791726,nssv1791681,nssv1791707,nssv1791676,nssv1791735,nssv1791686,nssv1791662,nssv1791739,nssv1791730,nssv1791683,nssv1791692,nssv1791693,nssv1791699,nssv1791691,nssv1791750,nssv1791740,nssv1791688,nssv1791679,nssv1791729,nssv1791682,nssv1791749,nssv1791743,nssv1791709,nssv1791741,nssv1790827,nssv1791733,nssv1791728,nssv1791711,nssv1791732,nssv1791706,nssv1791710,nssv1791715,nssv1791698,nssv1791704,nssv1791724,nssv1791696,nssv1791751,nssv1791737,nssv1791708,nssv1791700,nssv1791705,nssv1791714,nssv1791753,nssv1791738,nssv1790829,nssv1791721,nssv1791716,nssv1790828 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946278 1 144706371 144722592 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790838,nssv1790841,nssv1790834,nssv1790836,nssv1790837,nssv1790831,nssv1790840,nssv1790832,nssv1790833,nssv1790839,nssv1790835 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3328180 1 144717752 144720250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691929 M 185 1 0 "" NA12878 nsv946279 1 144722592 144793829 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790849,nssv1790915,nssv1790922,nssv1790914,nssv1790847,nssv1790882,nssv1790851,nssv1790912,nssv1790923,nssv1790896,nssv1790848,nssv1790930,nssv1790853,nssv1790935,nssv1790860,nssv1790898,nssv1790927,nssv1790892,nssv1790863,nssv1790910,nssv1790867,nssv1790929,nssv1790864,nssv1790908,nssv1790843,nssv1790911,nssv1790844,nssv1790917,nssv1790924,nssv1790880,nssv1790852,nssv1790883,nssv1790925,nssv1790903,nssv1790846,nssv1790874,nssv1790861,nssv1790869,nssv1790919,nssv1790906,nssv1790856,nssv1790933,nssv1790855,nssv1790887,nssv1790845,nssv1790936,nssv1790866,nssv1790878,nssv1790920,nssv1790902,nssv1790854,nssv1790888,nssv1790928,nssv1790842,nssv1790870,nssv1790918,nssv1790857,nssv1790889,nssv1790858,nssv1790913,nssv1790921,nssv1790886,nssv1790926,nssv1790909,nssv1790859,nssv1790876,nssv1790862,nssv1790901,nssv1790871,nssv1790890,nssv1790850,nssv1790905,nssv1790873,nssv1790932,nssv1790884,nssv1790879,nssv1790899,nssv1790938,nssv1790885,nssv1790894,nssv1790931,nssv1790877,nssv1790897,nssv1790865,nssv1790891,nssv1790868,nssv1790900,nssv1790872,nssv1790904,nssv1790916,nssv1790934,nssv1790895,nssv1790937,nssv1790893,nssv1790907,nssv1790881,nssv1790875 M 97 10 0 NBPF11,NBPF24 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831403 1 144723061 144938615 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449862 M 95 1 0 NBPF11,NBPF24 esv22721 1 144741655 144772214 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10508,esv12388 M 40 6 0 NBPF11,NBPF24 NA11993,NA15510,NA18502,NA18523,NA18916,NA19225 nsv946820 1 144742879 144745540 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589719,nssv2589690,nssv2589645,nssv2589696,nssv2589663,nssv2589677,nssv2589654,nssv2589684,nssv2589649,nssv2589708,nssv2589716,nssv2589688,nssv2589666,nssv2589710,nssv2589657,nssv2589713,nssv2589721,nssv2589695,nssv2589647,nssv2589667,nssv2589715,nssv2589701,nssv2589717,nssv2589693,nssv2589672,nssv2589676,nssv2589653,nssv2589692,nssv2589675,nssv2589711,nssv2589648,nssv2589709,nssv2589661,nssv2589697,nssv2589673,nssv2589694,nssv2589718,nssv2589679,nssv2589723,nssv2589678,nssv2589658,nssv2589681,nssv2589665,nssv2589698,nssv2589720,nssv2589683,nssv2589664,nssv2589680,nssv2589722,nssv2589686,nssv2589660,nssv2589687,nssv2589646,nssv2589712,nssv2589656,nssv2589707,nssv2589714,nssv2589644,nssv2589650,nssv2589702,nssv2589659,nssv2589682,nssv2589655,nssv2589705,nssv2589652,nssv2589689,nssv2589668,nssv2589670,nssv2589662,nssv2589703,nssv2589669,nssv2589704,nssv2589651,nssv2589691,nssv2589671,nssv2589699,nssv2589674,nssv2589706,nssv2589685,nssv2589700 M 97 10 0 NBPF11,NBPF24 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv820688 1 144744507 144772214 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420613 M 1 1 0 NBPF11,NBPF24 NA10851 nsv8136 1 144745289 144751030 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv17428,nssv21068 M 31 1 1 NBPF11,NBPF24 NA12155,NA19144 dgv9n82 1 144745540 144748856 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946822,nsv946823 M 97 10 0 NBPF11,NBPF24 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946824 1 144748856 144750217 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590813,nssv2590810,nssv2590772,nssv2590827,nssv2590751,nssv2590791,nssv2590769,nssv2590771,nssv2590820,nssv2590790,nssv2590817,nssv2590806,nssv2590747,nssv2590764,nssv2590831,nssv2590775,nssv2590766,nssv2590802,nssv2590744,nssv2590767,nssv2590752,nssv2590774,nssv2590762,nssv2590826,nssv2590745,nssv2590830,nssv2590824,nssv2590780,nssv2590763,nssv2590798,nssv2590761,nssv2590796,nssv2590753,nssv2590783,nssv2590750,nssv2590804,nssv2590814,nssv2590799,nssv2590759,nssv2590788,nssv2590758,nssv2590803,nssv2590825,nssv2590785,nssv2590773,nssv2590781,nssv2590829,nssv2590794,nssv2590746,nssv2590800,nssv2590812,nssv2590793,nssv2590816,nssv2590789,nssv2590755,nssv2590805,nssv2590832,nssv2590787,nssv2590748,nssv2590776,nssv2590818,nssv2590797,nssv2590760,nssv2590786,nssv2590756,nssv2590777,nssv2590749,nssv2590809,nssv2590819,nssv2590778,nssv2590742,nssv2590823,nssv2590828,nssv2590792,nssv2590770,nssv2590822,nssv2590815,nssv2590807,nssv2590754,nssv2590801,nssv2590765,nssv2590782,nssv2590743,nssv2590779,nssv2590811,nssv2590784,nssv2590757,nssv2590768,nssv2590741,nssv2590821,nssv2590808,nssv2590795 M 97 10 0 NBPF11,NBPF24 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946825 1 144750217 144750938 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2589102,nssv2589158,nssv2590846,nssv2589122,nssv2589161,nssv2589166,nssv2590838,nssv2589127,nssv2590853,nssv2589145,nssv2589155,nssv2589142,nssv2590845,nssv2589131,nssv2590840,nssv2589114,nssv2590835,nssv2589112,nssv2590839,nssv2589124,nssv2589108,nssv2589134,nssv2590843,nssv2589133,nssv2590849,nssv2589111,nssv2589152,nssv2589119,nssv2589101,nssv2589157,nssv2589106,nssv2589141,nssv2590837,nssv2589126,nssv2589168,nssv2589100,nssv2589156,nssv2590833,nssv2589151,nssv2589163,nssv2589165,nssv2589118,nssv2590855,nssv2589128,nssv2590848,nssv2589116,nssv2590850,nssv2589132,nssv2590851,nssv2589162,nssv2589148,nssv2589110,nssv2590847,nssv2589103,nssv2590841,nssv2589121,nssv2589105,nssv2589115,nssv2590836,nssv2589113,nssv2589167,nssv2589123,nssv2589147,nssv2589109,nssv2589153,nssv2589143,nssv2589160,nssv2589129,nssv2590852,nssv2589159,nssv2590854,nssv2589104,nssv2589149,nssv2589125,nssv2590834,nssv2589144,nssv2590844,nssv2589139,nssv2590842,nssv2589107,nssv2589164,nssv2589138,nssv2589150,nssv2589146,nssv2589154,nssv2589117,nssv2589135,nssv2589120,nssv2589130,nssv2589136,nssv2589137,nssv2589140 M 97 10 0 NBPF11,NBPF24 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946826 1 144752628 144771172 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590105,nssv2590148,nssv2590118,nssv2590135,nssv2589175,nssv2590145,nssv2589179,nssv2590128,nssv2590167,nssv2590155,nssv2589174,nssv2590136,nssv2590117,nssv2590152,nssv2590165,nssv2590157,nssv2590110,nssv2590123,nssv2590114,nssv2590150,nssv2590170,nssv2590139,nssv2590121,nssv2590119,nssv2589173,nssv2590141,nssv2590125,nssv2590149,nssv2590168,nssv2590161,nssv2590166,nssv2590162,nssv2589171,nssv2590143,nssv2590106,nssv2590127,nssv2589178,nssv2590158,nssv2589172,nssv2590146,nssv2590169,nssv2590140,nssv2590111,nssv2590133,nssv2590171,nssv2590137,nssv2589177,nssv2590116,nssv2590115,nssv2590147,nssv2590113,nssv2590144,nssv2590122,nssv2590154,nssv2590172,nssv2590134,nssv2590109,nssv2590142,nssv2590164,nssv2590160,nssv2590104,nssv2590126,nssv2590108,nssv2590131,nssv2590124,nssv2589169,nssv2590163,nssv2590156,nssv2589176,nssv2590159,nssv2589170,nssv2590153,nssv2590107,nssv2590151,nssv2590112,nssv2590132,nssv2590129,nssv2590138,nssv2590120,nssv2590130 M 97 10 0 NBPF11,NBPF24 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv160132 1 144761130 144767356 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178710 M 24 NBPF11,NBPF24 nsv2721 1 144768599 144822890 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10241 M 9 0 1 NBPF11,NBPF24 NA18956 nsv482114 1 144786833 144791590 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558475 M 1 1 0 NBPF11,NBPF24 KB1 nsv946281 1 144795143 144800715 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790941,nssv1790979,nssv1791019,nssv1791957,nssv1790946,nssv1791000,nssv1791025,nssv1791958,nssv1790968,nssv1790990,nssv1791020,nssv1790978,nssv1791017,nssv1790996,nssv1790945,nssv1791013,nssv1790940,nssv1791005,nssv1790957,nssv1790995,nssv1790943,nssv1790993,nssv1791024,nssv1791009,nssv1790944,nssv1791011,nssv1790960,nssv1791027,nssv1790964,nssv1790989,nssv1790961,nssv1790985,nssv1791022,nssv1790974,nssv1791021,nssv1791026,nssv1790967,nssv1790980,nssv1790954,nssv1791959,nssv1790949,nssv1791014,nssv1791016,nssv1790971,nssv1790952,nssv1791007,nssv1790953,nssv1791008,nssv1790948,nssv1791004,nssv1790958,nssv1791003,nssv1790950,nssv1790999,nssv1790963,nssv1790984,nssv1790955,nssv1790973,nssv1791018,nssv1791015,nssv1790942,nssv1790998,nssv1791023,nssv1791955,nssv1790947,nssv1790975,nssv1790959,nssv1791012,nssv1790970,nssv1790983,nssv1790956,nssv1790969,nssv1790951,nssv1790997,nssv1791006,nssv1791953,nssv1790987,nssv1790966,nssv1790986,nssv1791002,nssv1790981,nssv1791010,nssv1790976,nssv1790994,nssv1790977,nssv1790939,nssv1790988,nssv1790962,nssv1790972,nssv1790982,nssv1791001,nssv1791956,nssv1790992,nssv1791954,nssv1791952,nssv1790965,nssv1790991 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8147 1 144798803 144801061 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23395 M 31 0 1 "" NA19173 nsv946282 1 144804294 144810687 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791991,nssv1792003,nssv1791973,nssv1791986,nssv1792038,nssv1792009,nssv1791965,nssv1791997,nssv1792045,nssv1792054,nssv1792040,nssv1792019,nssv1791964,nssv1791994,nssv1792046,nssv1792022,nssv1791978,nssv1791993,nssv1791966,nssv1791998,nssv1791961,nssv1792027,nssv1791979,nssv1792004,nssv1792041,nssv1792012,nssv1791985,nssv1792013,nssv1791971,nssv1791992,nssv1791969,nssv1792002,nssv1791967,nssv1792020,nssv1791982,nssv1792001,nssv1791989,nssv1791995,nssv1791963,nssv1792032,nssv1792043,nssv1791960,nssv1792042,nssv1792015,nssv1791972,nssv1792055,nssv1791968,nssv1792056,nssv1791984,nssv1791983,nssv1791981,nssv1792018,nssv1792037,nssv1792025,nssv1791976,nssv1791999,nssv1791975,nssv1792052,nssv1791974,nssv1792006,nssv1792039,nssv1791987,nssv1791962,nssv1792014,nssv1791988,nssv1792010,nssv1791970,nssv1792021,nssv1792044,nssv1792017,nssv1791977,nssv1792023,nssv1791980,nssv1792005,nssv1792033,nssv1792000,nssv1792016,nssv1792050,nssv1792024,nssv1792034,nssv1792029,nssv1792028,nssv1792053,nssv1792026,nssv1792047,nssv1792048,nssv1792030,nssv1791990,nssv1792051,nssv1792011,nssv1792049,nssv1792008,nssv1792035,nssv1792007,nssv1792031,nssv1791996,nssv1792036 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946283 1 144810687 144817273 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792064,nssv1792061,nssv1792066,nssv1792079,nssv1792060,nssv1792094,nssv1792059,nssv1792097,nssv1792063,nssv1792084,nssv1792102,nssv1792071,nssv1792068,nssv1792088,nssv1792067,nssv1792072,nssv1792078,nssv1792077,nssv1792087,nssv1792090,nssv1792069,nssv1792093,nssv1792073,nssv1792057,nssv1792095,nssv1792100,nssv1792083,nssv1792058,nssv1792074,nssv1792085,nssv1792081,nssv1792062,nssv1792076,nssv1792070,nssv1792089,nssv1792096,nssv1792103,nssv1792104,nssv1792075,nssv1792091,nssv1792092,nssv1792098,nssv1792080,nssv1792101,nssv1792065,nssv1792099,nssv1792086,nssv1792082 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946284 1 144817273 144818273 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792136,nssv1792148,nssv1792110,nssv1792198,nssv1792185,nssv1792196,nssv1792106,nssv1792181,nssv1792191,nssv1792176,nssv1792183,nssv1792152,nssv1792114,nssv1792153,nssv1792123,nssv1792164,nssv1792109,nssv1792161,nssv1792118,nssv1792154,nssv1792186,nssv1792131,nssv1792111,nssv1792157,nssv1792107,nssv1792158,nssv1792117,nssv1792172,nssv1792134,nssv1792138,nssv1792108,nssv1792141,nssv1792124,nssv1792137,nssv1792113,nssv1792200,nssv1792187,nssv1792147,nssv1792190,nssv1792199,nssv1792127,nssv1792167,nssv1792116,nssv1792142,nssv1792188,nssv1792149,nssv1792130,nssv1792105,nssv1792129,nssv1792160,nssv1792126,nssv1792139,nssv1792182,nssv1792143,nssv1792121,nssv1792163,nssv1792112,nssv1792150,nssv1792119,nssv1792156,nssv1792184,nssv1792197,nssv1792120,nssv1792177,nssv1792115,nssv1792165,nssv1792133,nssv1792170,nssv1792189,nssv1792151,nssv1792122,nssv1792201,nssv1792125,nssv1792178,nssv1792128,nssv1792144,nssv1792159,nssv1792155,nssv1792132,nssv1792179,nssv1792193,nssv1792169,nssv1792140,nssv1792195,nssv1792146,nssv1792192,nssv1792174,nssv1792168,nssv1792135,nssv1792175,nssv1792166,nssv1792194,nssv1792145,nssv1792173,nssv1792162,nssv1792180,nssv1792171 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946285 1 144818273 144819723 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792209,nssv1792228,nssv1792211,nssv1792248,nssv1792205,nssv1792225,nssv1792208,nssv1792244,nssv1792204,nssv1792243,nssv1792246,nssv1792217,nssv1792227,nssv1792212,nssv1792206,nssv1792239,nssv1792229,nssv1792236,nssv1792247,nssv1792231,nssv1792213,nssv1792235,nssv1792218,nssv1792232,nssv1792216,nssv1792233,nssv1792224,nssv1792242,nssv1792215,nssv1792238,nssv1792222,nssv1792221,nssv1792214,nssv1792240,nssv1792202,nssv1792234,nssv1792241,nssv1792245,nssv1792223,nssv1792226,nssv1792237,nssv1792203,nssv1792230,nssv1792219,nssv1792249,nssv1792207,nssv1792220,nssv1792210 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946286 1 144819723 144820815 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792267,nssv1791212,nssv1791145,nssv1791146,nssv1791200,nssv1791185,nssv1792253,nssv1791159,nssv1791206,nssv1791191,nssv1792255,nssv1791196,nssv1792265,nssv1791209,nssv1792268,nssv1791167,nssv1791139,nssv1791176,nssv1791201,nssv1791163,nssv1792256,nssv1791171,nssv1792259,nssv1791182,nssv1792254,nssv1791174,nssv1791202,nssv1791215,nssv1791148,nssv1791153,nssv1791151,nssv1791207,nssv1791205,nssv1791170,nssv1792258,nssv1791208,nssv1791142,nssv1791194,nssv1791204,nssv1791214,nssv1791141,nssv1791190,nssv1792263,nssv1791155,nssv1792251,nssv1791160,nssv1791203,nssv1791186,nssv1792261,nssv1791195,nssv1791197,nssv1791181,nssv1791144,nssv1791192,nssv1792260,nssv1791211,nssv1791149,nssv1791216,nssv1792266,nssv1791161,nssv1791199,nssv1791143,nssv1791198,nssv1791156,nssv1792262,nssv1791187,nssv1791140,nssv1791213,nssv1792257,nssv1791147,nssv1792264,nssv1792250,nssv1792252,nssv1791193,nssv1791166,nssv1791179,nssv1791152,nssv1791189,nssv1791180,nssv1791184,nssv1791168,nssv1791162,nssv1791188,nssv1791165,nssv1791183,nssv1791175,nssv1791177,nssv1791158,nssv1791154,nssv1791178,nssv1791210,nssv1791157,nssv1791172,nssv1791169,nssv1791173,nssv1791150,nssv1791164 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946287 1 144820815 144828407 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791233,nssv1791279,nssv1791224,nssv1791269,nssv1791290,nssv1791247,nssv1791296,nssv1791255,nssv1791288,nssv1791260,nssv1791223,nssv1791268,nssv1791225,nssv1791267,nssv1791234,nssv1791270,nssv1791235,nssv1791256,nssv1791221,nssv1791271,nssv1791245,nssv1791283,nssv1791295,nssv1791243,nssv1791222,nssv1791273,nssv1791239,nssv1791252,nssv1791232,nssv1791282,nssv1791238,nssv1791278,nssv1791219,nssv1791257,nssv1791248,nssv1791250,nssv1791228,nssv1791264,nssv1791226,nssv1791286,nssv1791292,nssv1791276,nssv1791220,nssv1791249,nssv1791293,nssv1791277,nssv1791291,nssv1791274,nssv1791242,nssv1791258,nssv1791246,nssv1791281,nssv1791231,nssv1791272,nssv1791236,nssv1791285,nssv1791241,nssv1791284,nssv1791227,nssv1791275,nssv1791287,nssv1791280,nssv1791230,nssv1791259,nssv1791229,nssv1791244,nssv1791294,nssv1791262,nssv1791289,nssv1791253,nssv1791237,nssv1791240,nssv1791218,nssv1791265,nssv1791263,nssv1791217,nssv1791254,nssv1791251,nssv1791266,nssv1791261 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946288 1 144830359 144839471 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791302,nssv1792616,nssv1791309,nssv1792603,nssv1792614,nssv1792570,nssv1791300,nssv1792583,nssv1792609,nssv1792601,nssv1792615,nssv1792602,nssv1792607,nssv1792625,nssv1791313,nssv1792589,nssv1791304,nssv1792575,nssv1791303,nssv1792599,nssv1791315,nssv1791327,nssv1791301,nssv1792585,nssv1791306,nssv1792579,nssv1791316,nssv1791335,nssv1791325,nssv1792572,nssv1791326,nssv1792605,nssv1791305,nssv1792588,nssv1792611,nssv1792620,nssv1791312,nssv1791323,nssv1791328,nssv1792619,nssv1792608,nssv1792595,nssv1791319,nssv1792590,nssv1791318,nssv1792569,nssv1791298,nssv1792586,nssv1791307,nssv1792604,nssv1791308,nssv1792592,nssv1791322,nssv1792568,nssv1792610,nssv1792598,nssv1792612,nssv1791332,nssv1791321,nssv1791297,nssv1791311,nssv1792571,nssv1792606,nssv1792600,nssv1791314,nssv1792617,nssv1791317,nssv1792597,nssv1791310,nssv1792594,nssv1791299,nssv1792618,nssv1792613,nssv1792593,nssv1792596,nssv1792576,nssv1792580,nssv1792582,nssv1791329,nssv1792578,nssv1792622,nssv1792584,nssv1792623,nssv1792587,nssv1791334,nssv1791330,nssv1792624,nssv1791324,nssv1792581,nssv1792577,nssv1792621,nssv1792574,nssv1791331,nssv1792591,nssv1791320,nssv1791333,nssv1792573 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946289 1 144849007 144856683 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792631,nssv1792714,nssv1792707,nssv1792656,nssv1792654,nssv1792689,nssv1792634,nssv1792683,nssv1792636,nssv1792669,nssv1792651,nssv1792691,nssv1792706,nssv1792653,nssv1792630,nssv1792713,nssv1792712,nssv1792700,nssv1792645,nssv1792671,nssv1792644,nssv1792663,nssv1792647,nssv1792698,nssv1792704,nssv1792699,nssv1792633,nssv1792696,nssv1792711,nssv1792680,nssv1792632,nssv1792660,nssv1792655,nssv1792626,nssv1792708,nssv1792716,nssv1792648,nssv1792702,nssv1792641,nssv1792672,nssv1792627,nssv1792649,nssv1792639,nssv1792717,nssv1792635,nssv1792722,nssv1792628,nssv1792664,nssv1792638,nssv1792676,nssv1792629,nssv1792666,nssv1792643,nssv1792686,nssv1792705,nssv1792692,nssv1792709,nssv1792668,nssv1792650,nssv1792701,nssv1792637,nssv1792687,nssv1792640,nssv1792685,nssv1792657,nssv1792682,nssv1792703,nssv1792721,nssv1792642,nssv1792665,nssv1792646,nssv1792688,nssv1792710,nssv1792652,nssv1792693,nssv1792694,nssv1792695,nssv1792681,nssv1792690,nssv1792667,nssv1792715,nssv1792697,nssv1792679,nssv1792661,nssv1792659,nssv1792677,nssv1792662,nssv1792675,nssv1792718,nssv1792673,nssv1792684,nssv1792720,nssv1792658,nssv1792719,nssv1792670,nssv1792678,nssv1792674 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946290 1 144856683 144858110 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792730,nssv1792738,nssv1792726,nssv1792766,nssv1792729,nssv1792745,nssv1792725,nssv1792746,nssv1792732,nssv1792763,nssv1792737,nssv1792767,nssv1792755,nssv1792724,nssv1792728,nssv1792731,nssv1792744,nssv1792735,nssv1792723,nssv1792739,nssv1792761,nssv1792747,nssv1792760,nssv1792764,nssv1792757,nssv1792727,nssv1792762,nssv1792758,nssv1792741,nssv1792752,nssv1792770,nssv1792768,nssv1792751,nssv1792743,nssv1792759,nssv1792749,nssv1792753,nssv1792734,nssv1792765,nssv1792769,nssv1792750,nssv1792740,nssv1792742,nssv1792756,nssv1792754,nssv1792736,nssv1792733,nssv1792748 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946293 1 144858110 144859235 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792801,nssv1792776,nssv1792819,nssv1792779,nssv1792866,nssv1792851,nssv1792859,nssv1792785,nssv1792845,nssv1792796,nssv1792815,nssv1792857,nssv1792860,nssv1792773,nssv1792816,nssv1792783,nssv1792836,nssv1792789,nssv1792843,nssv1792777,nssv1792858,nssv1792775,nssv1792807,nssv1792792,nssv1792794,nssv1792790,nssv1792844,nssv1792856,nssv1792808,nssv1792852,nssv1792862,nssv1792850,nssv1792841,nssv1792778,nssv1792825,nssv1792799,nssv1792831,nssv1792781,nssv1792846,nssv1792853,nssv1792833,nssv1792786,nssv1792771,nssv1792772,nssv1792809,nssv1792791,nssv1792814,nssv1792782,nssv1792847,nssv1792855,nssv1792798,nssv1792780,nssv1792837,nssv1792774,nssv1792867,nssv1792795,nssv1792823,nssv1792793,nssv1792834,nssv1792800,nssv1792803,nssv1792854,nssv1792838,nssv1792784,nssv1792817,nssv1792848,nssv1792830,nssv1792787,nssv1792805,nssv1792802,nssv1792861,nssv1792849,nssv1792828,nssv1792788,nssv1792864,nssv1792832,nssv1792797,nssv1792840,nssv1792812,nssv1792811,nssv1792810,nssv1792835,nssv1792822,nssv1792813,nssv1792826,nssv1792804,nssv1792820,nssv1792839,nssv1792824,nssv1792829,nssv1792806,nssv1792821,nssv1792863,nssv1792865,nssv1792842,nssv1792818,nssv1792827 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946294 1 144870169 144876107 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790278,nssv1790282,nssv1792873,nssv1792868,nssv1790279,nssv1790223,nssv1790214,nssv1790228,nssv1793492,nssv1790243,nssv1793494,nssv1790236,nssv1790274,nssv1790246,nssv1792875,nssv1790252,nssv1793499,nssv1790255,nssv1792871,nssv1790267,nssv1793497,nssv1790286,nssv1793502,nssv1790232,nssv1790224,nssv1790260,nssv1792872,nssv1790249,nssv1790215,nssv1790287,nssv1793493,nssv1790265,nssv1792870,nssv1790219,nssv1790276,nssv1790231,nssv1790218,nssv1790247,nssv1793495,nssv1790285,nssv1793498,nssv1790251,nssv1792869,nssv1790288,nssv1790271,nssv1790248,nssv1790273,nssv1790244,nssv1790275,nssv1790234,nssv1790270,nssv1790283,nssv1790212,nssv1790262,nssv1790217,nssv1790229,nssv1790272,nssv1790237,nssv1790222,nssv1790254,nssv1792874,nssv1790227,nssv1790221,nssv1790233,nssv1790277,nssv1790239,nssv1790213,nssv1790225,nssv1793500,nssv1790241,nssv1793496,nssv1790261,nssv1793501,nssv1790266,nssv1790253,nssv1790230,nssv1790216,nssv1790268,nssv1790289,nssv1790281,nssv1790240,nssv1790280,nssv1790250,nssv1790269,nssv1790242,nssv1790256,nssv1790257,nssv1790238,nssv1790258,nssv1790259,nssv1790264,nssv1790235,nssv1790263,nssv1790220,nssv1790226,nssv1790245,nssv1790284 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv28550 1 144875115 144875975 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv9978 M 40 2 0 "" NA18511,NA18916 nsv946295 1 144925607 144974207 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1790376,nssv1790313,nssv1790295,nssv1790316,nssv1790296,nssv1790386,nssv1790299,nssv1790335,nssv1790318,nssv1790290,nssv1790372,nssv1790342,nssv1790308,nssv1790349,nssv1790293,nssv1790357,nssv1790294,nssv1790333,nssv1790311,nssv1790343,nssv1790301,nssv1790323,nssv1790321,nssv1790346,nssv1790291,nssv1790385,nssv1790371,nssv1790325,nssv1790312,nssv1790362,nssv1790373,nssv1790360,nssv1790302,nssv1790344,nssv1790303,nssv1790340,nssv1790300,nssv1790364,nssv1790319,nssv1790345,nssv1790297,nssv1790320,nssv1790315,nssv1790363,nssv1790368,nssv1790384,nssv1790292,nssv1790348,nssv1790304,nssv1790332,nssv1790310,nssv1790328,nssv1790314,nssv1790352,nssv1790298,nssv1790382,nssv1790305,nssv1790329,nssv1790375,nssv1790341,nssv1790309,nssv1790347,nssv1790367,nssv1790331,nssv1790369,nssv1790339,nssv1790374,nssv1790327,nssv1790306,nssv1790336,nssv1790307,nssv1790379,nssv1790370,nssv1790326,nssv1790324,nssv1790378,nssv1790351,nssv1790334,nssv1790380,nssv1790358,nssv1790350,nssv1790359,nssv1790377,nssv1790330,nssv1790322,nssv1790383,nssv1790365,nssv1790356,nssv1790338,nssv1790337,nssv1790366,nssv1790353,nssv1790354,nssv1790361,nssv1790381,nssv1790355,nssv1790317 M 97 10 0 LOC728989 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv820542 1 144926034 144932236 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420625 M 1 1 0 "" NA10851 esv24069 1 144926034 144952145 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16911,esv17130 M 40 5 0 "" NA12414,NA15510,NA18511,NA18916,NA19257 dgv203e59 1 144926052 144932450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3392647,esv3383734,esv3429697,esv3414392,esv3446695,esv3374426 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv946827 1 144926107 144927368 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590176,nssv2590223,nssv2590201,nssv2590211,nssv2590257,nssv2590253,nssv2590205,nssv2590251,nssv2590184,nssv2590175,nssv2590194,nssv2590179,nssv2590214,nssv2590220,nssv2590213,nssv2590250,nssv2590186,nssv2590234,nssv2590256,nssv2590245,nssv2590177,nssv2590242,nssv2590197,nssv2590240,nssv2590259,nssv2590244,nssv2590189,nssv2590247,nssv2590216,nssv2590239,nssv2590195,nssv2590208,nssv2590264,nssv2590248,nssv2590260,nssv2590230,nssv2590196,nssv2590233,nssv2590192,nssv2590241,nssv2590187,nssv2590185,nssv2590193,nssv2590221,nssv2590191,nssv2590228,nssv2590199,nssv2590226,nssv2590255,nssv2590219,nssv2590202,nssv2590252,nssv2590210,nssv2590178,nssv2590198,nssv2590237,nssv2590207,nssv2590215,nssv2590188,nssv2590182,nssv2590203,nssv2590174,nssv2590181,nssv2590218,nssv2590209,nssv2590235,nssv2590261,nssv2590212,nssv2590263,nssv2590231,nssv2590204,nssv2590225,nssv2590258,nssv2590254,nssv2590262,nssv2590222,nssv2590206,nssv2590243,nssv2590180,nssv2590249,nssv2590190,nssv2590227,nssv2590200,nssv2590232,nssv2590183,nssv2590265,nssv2590217,nssv2590246,nssv2590229,nssv2590224,nssv2590236,nssv2590238 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946828 1 144927368 144930339 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590288,nssv2590325,nssv2590349,nssv2590329,nssv2590285,nssv2590308,nssv2590291,nssv2590332,nssv2590336,nssv2590327,nssv2590353,nssv2590318,nssv2590297,nssv2590311,nssv2590275,nssv2590317,nssv2590282,nssv2590293,nssv2590283,nssv2590314,nssv2590337,nssv2590289,nssv2590268,nssv2590313,nssv2590279,nssv2590321,nssv2590340,nssv2590334,nssv2590338,nssv2590347,nssv2590277,nssv2590301,nssv2590276,nssv2590335,nssv2590280,nssv2590333,nssv2590356,nssv2590331,nssv2590278,nssv2590312,nssv2590272,nssv2590328,nssv2590295,nssv2590330,nssv2590344,nssv2590351,nssv2590343,nssv2590304,nssv2590352,nssv2590309,nssv2590339,nssv2590307,nssv2590286,nssv2590316,nssv2590269,nssv2590350,nssv2590270,nssv2590305,nssv2590341,nssv2590310,nssv2590348,nssv2590346,nssv2590345,nssv2590302,nssv2590274,nssv2590323,nssv2590284,nssv2590326,nssv2590342,nssv2590315,nssv2590355,nssv2590300,nssv2590273,nssv2590320,nssv2590287,nssv2590322,nssv2590267,nssv2590319,nssv2590294,nssv2590296,nssv2590298,nssv2590357,nssv2590271,nssv2590292,nssv2590281,nssv2590299,nssv2590290,nssv2590306,nssv2590354,nssv2590324,nssv2590303,nssv2590266 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946829 1 144930339 144931524 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590365,nssv2590358,nssv2591365,nssv2591370,nssv2590359,nssv2591339,nssv2590368,nssv2590404,nssv2590386,nssv2591344,nssv2590364,nssv2591366,nssv2590379,nssv2591346,nssv2590376,nssv2590402,nssv2590361,nssv2590401,nssv2590377,nssv2591349,nssv2591368,nssv2591348,nssv2590370,nssv2590411,nssv2591361,nssv2591373,nssv2590363,nssv2590405,nssv2590373,nssv2591337,nssv2591358,nssv2591362,nssv2590380,nssv2590396,nssv2591372,nssv2591345,nssv2590374,nssv2590392,nssv2591355,nssv2590408,nssv2590371,nssv2591363,nssv2591354,nssv2590395,nssv2591357,nssv2591341,nssv2591356,nssv2590388,nssv2590383,nssv2590399,nssv2590366,nssv2590398,nssv2590387,nssv2591367,nssv2591360,nssv2591343,nssv2590375,nssv2590394,nssv2590378,nssv2590403,nssv2590360,nssv2591347,nssv2591371,nssv2590393,nssv2590382,nssv2591342,nssv2590362,nssv2590385,nssv2590390,nssv2590391,nssv2590372,nssv2591351,nssv2591352,nssv2590409,nssv2590367,nssv2590406,nssv2591359,nssv2590397,nssv2591369,nssv2590407,nssv2590369,nssv2591350,nssv2591364,nssv2591336,nssv2591353,nssv2590410,nssv2590389,nssv2590381,nssv2590384,nssv2590400,nssv2591340,nssv2591338 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2732 1 144930540 144945552 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9597,nssv6954 M 9 2 0 "" NA12156,NA18507 nsv946830 1 144931524 144932447 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591394,nssv2591453,nssv2591399,nssv2591415,nssv2591393,nssv2591408,nssv2591405,nssv2591421,nssv2591414,nssv2591451,nssv2591460,nssv2591424,nssv2591456,nssv2591465,nssv2591392,nssv2591443,nssv2591386,nssv2591454,nssv2591383,nssv2591382,nssv2591389,nssv2591374,nssv2591380,nssv2591437,nssv2591406,nssv2591378,nssv2591459,nssv2591432,nssv2591416,nssv2591444,nssv2591376,nssv2591385,nssv2591397,nssv2591412,nssv2591463,nssv2591431,nssv2591410,nssv2591440,nssv2591409,nssv2591430,nssv2591461,nssv2591427,nssv2591413,nssv2591434,nssv2591458,nssv2591426,nssv2591417,nssv2591429,nssv2591390,nssv2591379,nssv2591395,nssv2591450,nssv2591377,nssv2591449,nssv2591457,nssv2591420,nssv2591462,nssv2591422,nssv2591403,nssv2591436,nssv2591407,nssv2591447,nssv2591455,nssv2591423,nssv2591400,nssv2591435,nssv2591396,nssv2591411,nssv2591402,nssv2591442,nssv2591398,nssv2591428,nssv2591388,nssv2591441,nssv2591381,nssv2591448,nssv2591404,nssv2591439,nssv2591384,nssv2591425,nssv2591464,nssv2591433,nssv2591391,nssv2591418,nssv2591387,nssv2591446,nssv2591401,nssv2591419,nssv2591452,nssv2591445,nssv2591438,nssv2591375 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946831 1 144932447 144939674 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591472,nssv2590477,nssv2591480,nssv2590491,nssv2590471,nssv2590484,nssv2590530,nssv2590498,nssv2591468,nssv2590522,nssv2590482,nssv2590511,nssv2590473,nssv2590499,nssv2591470,nssv2590506,nssv2590529,nssv2590500,nssv2591479,nssv2590507,nssv2590527,nssv2590508,nssv2590478,nssv2590523,nssv2590469,nssv2590494,nssv2590470,nssv2590487,nssv2590531,nssv2590515,nssv2590532,nssv2590504,nssv2591467,nssv2590492,nssv2590486,nssv2590493,nssv2591475,nssv2590495,nssv2590533,nssv2590480,nssv2591478,nssv2590489,nssv2590483,nssv2590488,nssv2591476,nssv2590516,nssv2590479,nssv2590519,nssv2590528,nssv2590503,nssv2591474,nssv2590490,nssv2590525,nssv2590496,nssv2591471,nssv2590512,nssv2590475,nssv2590509,nssv2590526,nssv2590513,nssv2590476,nssv2591466,nssv2590474,nssv2590481,nssv2591477,nssv2590501,nssv2590485,nssv2590497,nssv2590472,nssv2590514,nssv2590524,nssv2590502,nssv2591473,nssv2590521,nssv2591469,nssv2590505,nssv2590518,nssv2590520,nssv2590517,nssv2590510 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3447305 1 144933152 144933850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691938 M 185 1 0 "" NA19239 nsv2744 1 144957961 144960749 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5902 M 9 1 0 LOC728989 NA19129 nsv946297 1 144974207 144977056 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791384,nssv1791346,nssv1790396,nssv1791364,nssv1790393,nssv1791345,nssv1791390,nssv1791355,nssv1791382,nssv1791360,nssv1790398,nssv1790410,nssv1790389,nssv1791347,nssv1791339,nssv1791349,nssv1790405,nssv1791348,nssv1790391,nssv1791341,nssv1790408,nssv1791363,nssv1790392,nssv1791367,nssv1790394,nssv1791365,nssv1791342,nssv1791354,nssv1791340,nssv1791373,nssv1790399,nssv1791377,nssv1790409,nssv1791337,nssv1790400,nssv1791362,nssv1790411,nssv1791350,nssv1791389,nssv1790387,nssv1790397,nssv1791353,nssv1790402,nssv1791378,nssv1791386,nssv1791361,nssv1790401,nssv1791376,nssv1791387,nssv1791372,nssv1791336,nssv1791358,nssv1791385,nssv1791370,nssv1790406,nssv1791371,nssv1790388,nssv1791343,nssv1791381,nssv1791351,nssv1790395,nssv1791338,nssv1790403,nssv1791359,nssv1790390,nssv1791374,nssv1791388,nssv1791368,nssv1790407,nssv1791366,nssv1790404,nssv1791380,nssv1791383,nssv1791352,nssv1791379,nssv1791375,nssv1791356,nssv1791369,nssv1791344,nssv1791357 M 97 10 0 LOC728989 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946298 1 144977056 145024163 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791407,nssv1791481,nssv1791400,nssv1791436,nssv1791402,nssv1791464,nssv1791399,nssv1791438,nssv1791398,nssv1791457,nssv1791395,nssv1791414,nssv1791409,nssv1791483,nssv1791392,nssv1791439,nssv1791410,nssv1791435,nssv1791394,nssv1791425,nssv1791471,nssv1791391,nssv1791413,nssv1791444,nssv1791422,nssv1791484,nssv1791474,nssv1791480,nssv1791472,nssv1791440,nssv1791397,nssv1791462,nssv1791473,nssv1791427,nssv1791405,nssv1791478,nssv1791412,nssv1791479,nssv1791477,nssv1791421,nssv1791406,nssv1791465,nssv1791415,nssv1791424,nssv1791403,nssv1791417,nssv1791419,nssv1791461,nssv1791468,nssv1791443,nssv1791416,nssv1791447,nssv1791401,nssv1791428,nssv1791476,nssv1791429,nssv1791420,nssv1791453,nssv1791469,nssv1791445,nssv1791396,nssv1791459,nssv1791475,nssv1791485,nssv1791393,nssv1791442,nssv1791411,nssv1791466,nssv1791408,nssv1791434,nssv1791470,nssv1791456,nssv1791404,nssv1791437,nssv1791450,nssv1791452,nssv1791482,nssv1791430,nssv1791486,nssv1791467,nssv1791441,nssv1791426,nssv1791433,nssv1791446,nssv1791487,nssv1791463,nssv1791451,nssv1791423,nssv1791458,nssv1791448,nssv1791455,nssv1791431,nssv1791460,nssv1791449,nssv1791418,nssv1791432,nssv1791454 M 97 10 0 LOC728989 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946299 1 145039769 145042976 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791568,nssv1791546,nssv1791493,nssv1791532,nssv1791574,nssv1791526,nssv1791565,nssv1791545,nssv1791494,nssv1791551,nssv1791506,nssv1791552,nssv1791504,nssv1791536,nssv1791492,nssv1791515,nssv1791513,nssv1791580,nssv1791491,nssv1791530,nssv1791499,nssv1791578,nssv1791507,nssv1791511,nssv1791495,nssv1791548,nssv1791490,nssv1791533,nssv1791500,nssv1791561,nssv1791503,nssv1791556,nssv1791489,nssv1791488,nssv1791510,nssv1791524,nssv1791516,nssv1791535,nssv1791570,nssv1791521,nssv1791571,nssv1791581,nssv1791509,nssv1791541,nssv1791519,nssv1791522,nssv1791512,nssv1791529,nssv1791502,nssv1791575,nssv1791497,nssv1791576,nssv1791569,nssv1791562,nssv1791566,nssv1791559,nssv1791572,nssv1791537,nssv1791573,nssv1791518,nssv1791517,nssv1791558,nssv1791498,nssv1791540,nssv1791496,nssv1791554,nssv1791505,nssv1791525,nssv1791508,nssv1791577,nssv1791567,nssv1791557,nssv1791501,nssv1791514,nssv1791550,nssv1791560,nssv1791582,nssv1791527,nssv1791542,nssv1791563,nssv1791579,nssv1791564,nssv1791531,nssv1791583,nssv1791544,nssv1791539,nssv1791523,nssv1791538,nssv1791547,nssv1791534,nssv1791555,nssv1791549,nssv1791584,nssv1791520,nssv1791553,nssv1791528,nssv1791543 M 97 10 0 NBPF13P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946301 1 145049720 145050220 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590613,nssv2590599,nssv2590606,nssv2590591,nssv2590553,nssv2590577,nssv2590552,nssv2590574,nssv2590617,nssv2590535,nssv2590540,nssv2590616,nssv2590536,nssv2590580,nssv2590557,nssv2590587,nssv2590605,nssv2590585,nssv2590566,nssv2590534,nssv2590621,nssv2590592,nssv2590538,nssv2590600,nssv2590607,nssv2590598,nssv2590555,nssv2590562,nssv2590608,nssv2590569,nssv2590564,nssv2590620,nssv2590548,nssv2590597,nssv2590622,nssv2590586,nssv2590545,nssv2590578,nssv2590549,nssv2590584,nssv2590611,nssv2590588,nssv2590612,nssv2590576,nssv2590543,nssv2590625,nssv2590610,nssv2590618,nssv2590547,nssv2590560,nssv2590551,nssv2590604,nssv2590544,nssv2590571,nssv2590556,nssv2590595,nssv2590614,nssv2590593,nssv2590559,nssv2590596,nssv2590550,nssv2590573,nssv2590546,nssv2590583,nssv2590609,nssv2590581,nssv2590542,nssv2590619,nssv2590563,nssv2590603,nssv2590539,nssv2590579,nssv2590624,nssv2590565,nssv2590537,nssv2590602,nssv2590541,nssv2590594,nssv2590554,nssv2590572,nssv2590590,nssv2590570,nssv2590575,nssv2590601,nssv2590567,nssv2590623,nssv2590615,nssv2590558,nssv2590568,nssv2590582,nssv2590561,nssv2590589 M 97 10 0 NBPF13P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946300 1 145049720 145071011 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791765,nssv1791756,nssv1791767,nssv1791617,nssv1791590,nssv1791585,nssv1791773,nssv1791634,nssv1791610,nssv1791782,nssv1791586,nssv1792882,nssv1791769,nssv1791620,nssv1791772,nssv1791625,nssv1791603,nssv1791608,nssv1791591,nssv1791630,nssv1791589,nssv1791783,nssv1791587,nssv1791642,nssv1791597,nssv1791759,nssv1791600,nssv1791612,nssv1791592,nssv1791779,nssv1791596,nssv1791633,nssv1791613,nssv1791629,nssv1791601,nssv1791777,nssv1791607,nssv1791627,nssv1791594,nssv1791760,nssv1791770,nssv1791780,nssv1791606,nssv1792883,nssv1791616,nssv1792879,nssv1791604,nssv1791615,nssv1791595,nssv1791755,nssv1791593,nssv1791762,nssv1791609,nssv1791640,nssv1791599,nssv1791643,nssv1791614,nssv1791623,nssv1791764,nssv1791774,nssv1791588,nssv1792877,nssv1791771,nssv1791632,nssv1791602,nssv1792876,nssv1791598,nssv1791631,nssv1791768,nssv1791775,nssv1791605,nssv1791761,nssv1791766,nssv1791619,nssv1791624,nssv1791638,nssv1791621,nssv1791637,nssv1791757,nssv1791611,nssv1791758,nssv1792878,nssv1791622,nssv1792884,nssv1791626,nssv1791763,nssv1791641,nssv1791628,nssv1791776,nssv1791639,nssv1791778,nssv1792881,nssv1792880,nssv1791636,nssv1791635,nssv1791781,nssv1791618 M 97 10 0 NBPF13P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946832 1 145050220 145052406 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590716,nssv2590698,nssv2590636,nssv2590673,nssv2590663,nssv2590706,nssv2590717,nssv2590677,nssv2590660,nssv2590635,nssv2590713,nssv2590668,nssv2590669,nssv2590696,nssv2590630,nssv2590628,nssv2590642,nssv2590685,nssv2590652,nssv2590704,nssv2590715,nssv2590692,nssv2590653,nssv2590694,nssv2590655,nssv2590688,nssv2590643,nssv2590683,nssv2590662,nssv2590703,nssv2590641,nssv2590678,nssv2590649,nssv2590664,nssv2590648,nssv2590693,nssv2590646,nssv2590676,nssv2590714,nssv2590686,nssv2590633,nssv2590638,nssv2590637,nssv2590699,nssv2590657,nssv2590682,nssv2590639,nssv2590697,nssv2590709,nssv2590672,nssv2590634,nssv2590631,nssv2590659,nssv2590707,nssv2590667,nssv2590690,nssv2590708,nssv2590684,nssv2590656,nssv2590691,nssv2590647,nssv2590627,nssv2590711,nssv2590700,nssv2590670,nssv2590705,nssv2590640,nssv2590671,nssv2590666,nssv2590679,nssv2590651,nssv2590674,nssv2590629,nssv2590632,nssv2590644,nssv2590701,nssv2590645,nssv2590626,nssv2590658,nssv2590675,nssv2590654,nssv2590680,nssv2590650,nssv2590687,nssv2590712,nssv2590702,nssv2590710,nssv2590661,nssv2590689,nssv2590681,nssv2590665,nssv2590695 M 97 10 0 NBPF13P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8169 1 145109955 145112619 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv16749 M 31 1 0 PRKAB2 NA12740 nsv437047 1 145110179 145308226 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466928 M 60 0 1 CHD1L,FMO5,PDIA3P1,PRKAB2 NA12752 nsv946302 1 145116477 145117679 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791857,nssv1791827,nssv1791859,nssv1791839,nssv1791785,nssv1791842,nssv1791863,nssv1791822,nssv1791797,nssv1791851,nssv1791789,nssv1791838,nssv1791790,nssv1791830,nssv1791786,nssv1791817,nssv1791791,nssv1791823,nssv1791796,nssv1791816,nssv1791862,nssv1791849,nssv1791788,nssv1791819,nssv1791809,nssv1791824,nssv1791801,nssv1791845,nssv1791792,nssv1791825,nssv1791799,nssv1791784,nssv1791795,nssv1791834,nssv1791813,nssv1791841,nssv1791793,nssv1791811,nssv1791812,nssv1791853,nssv1791787,nssv1791807,nssv1791806,nssv1791829,nssv1791802,nssv1791847,nssv1791860,nssv1791848,nssv1791803,nssv1791852,nssv1791858,nssv1791844,nssv1791808,nssv1791850,nssv1791854,nssv1791814,nssv1791798,nssv1791818,nssv1791805,nssv1791835,nssv1791800,nssv1791826,nssv1791794,nssv1791837,nssv1791815,nssv1791840,nssv1791856,nssv1791828,nssv1791861,nssv1791820,nssv1791855,nssv1791846,nssv1791804,nssv1791832,nssv1791831,nssv1791821,nssv1791833,nssv1791810,nssv1791836,nssv1791843 M 97 10 0 PDIA3P1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv159869 1 145124844 145124844 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178447 M 24 FMO5 nsv547676 1 145152852 145462671 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723084 M 17421 1 0 CHD1L,FMO5,LINC00624 nsv946304 1 145161740 145163298 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1791867,nssv1791896,nssv1791879,nssv1791920,nssv1791875,nssv1791918,nssv1791872,nssv1791927,nssv1791950,nssv1793189,nssv1791944,nssv1791931,nssv1791870,nssv1791898,nssv1791949,nssv1791923,nssv1791882,nssv1791907,nssv1791868,nssv1791916,nssv1791892,nssv1791906,nssv1791889,nssv1791902,nssv1791865,nssv1793186,nssv1791946,nssv1791897,nssv1791877,nssv1791910,nssv1791893,nssv1791917,nssv1791873,nssv1791924,nssv1791869,nssv1791891,nssv1791874,nssv1791922,nssv1791866,nssv1791905,nssv1791895,nssv1791887,nssv1791886,nssv1791921,nssv1791871,nssv1791937,nssv1791947,nssv1791899,nssv1791883,nssv1791903,nssv1791943,nssv1793184,nssv1791888,nssv1791919,nssv1791878,nssv1791929,nssv1791942,nssv1791936,nssv1791941,nssv1791864,nssv1791885,nssv1791933,nssv1791876,nssv1791925,nssv1791880,nssv1791914,nssv1791948,nssv1793190,nssv1791884,nssv1791909,nssv1791945,nssv1791930,nssv1791881,nssv1793191,nssv1791913,nssv1791904,nssv1791928,nssv1791926,nssv1793187,nssv1793188,nssv1793185,nssv1791938,nssv1791894,nssv1791951,nssv1791932,nssv1791934,nssv1791939,nssv1791935,nssv1791915,nssv1791900,nssv1793192,nssv1791940,nssv1791911,nssv1791890,nssv1791912,nssv1791908,nssv1791901 M 97 10 0 FMO5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3894112 1 145191547 145280882 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779150 M 3017 0 1 CHD1L esv2761654 1 145216894 145275780 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6995756 M 1109 0 1 CHD1L SW_1342 nsv998093 1 145246019 145380603 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498646 M 29084 0 1 LINC00624 nsv1009728 1 145288128 145394590 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702115 M 29084 0 1 LINC00624 dgv335n100 1 145300616 145361538 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1015073,nsv1014319 M 29084 0 2 LINC00624 esv33421 1 145312377 145315276 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98899,essv99917 M 51 0 2 "" 21606,22086 nsv831414 1 145351618 145550490 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449895,nssv1449873,nssv1449884 M 95 3 0 BCL9,LINC00624 esv2764179 1 145388803 145394602 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006210,essv7006208,essv7006209 M 1109 0 3 LINC00624 RW_0018,RW_0042,RW_0583 nsv474307 1 145393636 145393636 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018117 M 9 1 0 LINC00624 NA18507 dgv207e59 1 145426965 145427087 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302714,esv3302568 M 185 27 0 LINC00624 NA11881,NA11894,NA11920,NA11931,NA11993,NA12004,NA12044,NA12287,NA12749,NA12878,NA12891,NA12892,NA18511,NA18517,NA18532,NA18858,NA18861,NA18907,NA18949,NA18956,NA18973,NA19108,NA19114,NA19225,NA19238,NA19239,NA19240 nsv159275 1 145426970 145426970 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177853 M 24 LINC00624 esv3343492 1 145426974 145427076 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670838,essv8670844,essv8670842,essv8670840,essv8670839,essv8670843 M 185 6 0 LINC00624 NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv3584596 1 145427411 145437192 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838194 M 34 0 1 LINC00624 OA064 esv991209 1 145428078 145428149 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570948 M 3 0 1 LINC00624 HuRef esv1706389 1 145428141 145428213 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4247274 M 2 0 1 LINC00624 HuRef nsv831426 1 145556554 145731891 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449906 M 95 0 1 ACP6,BCL9,GJA5 esv32902 1 145573997 145574596 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv100674 M 51 1 0 "" 21656 esv3349594 1 145618392 145618411 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596368 M 185 1 0 "" NA12814 nsv997330 1 145652562 145780590 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702117 M 29084 1 0 GJA5 nsv463506 1 145658465 145776067 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539525 M 1557 1 0 GJA5 1780854090_A nsv547677 1 145658465 145776067 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173141 M 17421 1 0 GJA5 1780854090_A nsv463517 1 145658465 145842605 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539536 M 1557 1 0 GJA5,GJA8 1780862040_A nsv547678 1 145658465 145842605 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173142 M 17421 1 0 GJA5,GJA8 1780862040_A nsv831437 1 145701231 145859616 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449917 M 95 0 1 GJA5,GJA8 esv3894123 1 145705110 145842605 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25791318 M 3017 1 0 GJA5,GJA8 esv3415850 1 145755155 145755155 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740937 M 185 1 0 "" NA19240 nsv946309 1 145776795 145781549 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793359,nssv1793333,nssv1793347,nssv1793342,nssv1793355,nssv1793329,nssv1793363,nssv1793326,nssv1793376,nssv1793334,nssv1793321,nssv1793350,nssv1793379,nssv1793336,nssv1793417,nssv1793400,nssv1793354,nssv1793401,nssv1793364,nssv1793335,nssv1793382,nssv1793399,nssv1793372,nssv1793407,nssv1793367,nssv1793331,nssv1793383,nssv1793340,nssv1793390,nssv1793341,nssv1793385,nssv1793323,nssv1793378,nssv1793325,nssv1793351,nssv1793339,nssv1793384,nssv1793322,nssv1793374,nssv1793324,nssv1793411,nssv1793352,nssv1793368,nssv1793346,nssv1793362,nssv1793349,nssv1793360,nssv1793403,nssv1793353,nssv1793330,nssv1793371,nssv1793332,nssv1793414,nssv1793328,nssv1793389,nssv1793405,nssv1793381,nssv1793345,nssv1793409,nssv1793327,nssv1793344,nssv1793402,nssv1793391,nssv1793337,nssv1793395,nssv1793343,nssv1793356,nssv1793404,nssv1793361,nssv1793398,nssv1793408,nssv1793406,nssv1793373,nssv1793338,nssv1793392,nssv1793387,nssv1793369,nssv1793415,nssv1793393,nssv1793370,nssv1793397,nssv1793380,nssv1793386,nssv1793412,nssv1793377,nssv1793348,nssv1793388,nssv1793365,nssv1793416,nssv1793358,nssv1793357,nssv1793396,nssv1793394,nssv1793375,nssv1793366,nssv1793413,nssv1793410 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1000564 1 145806592 146297795 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702118 M 29084 1 0 GJA8,GPR89B,GPR89C,MIR5087,NBPF10,NBPF11,NBPF24,NBPF8,PDZK1P1 esv1965331 1 145856652 145857263 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4748489 M 1 0 1 "" NA18507 esv9211 1 145856737 145857361 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31652 M 1 0 0 "" nsv946310 1 145857222 145865995 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793437,nssv1793472,nssv1793423,nssv1793454,nssv1793439,nssv1793451,nssv1793438,nssv1792276,nssv1794419,nssv1793476,nssv1794425,nssv1793456,nssv1793449,nssv1793463,nssv1794420,nssv1793473,nssv1793426,nssv1792274,nssv1793446,nssv1793418,nssv1792271,nssv1793444,nssv1793431,nssv1793480,nssv1793432,nssv1793455,nssv1793421,nssv1793491,nssv1794422,nssv1793485,nssv1793433,nssv1793452,nssv1793422,nssv1793487,nssv1793436,nssv1793461,nssv1793429,nssv1793448,nssv1793428,nssv1793469,nssv1794423,nssv1793475,nssv1793427,nssv1793481,nssv1793419,nssv1793479,nssv1793424,nssv1793482,nssv1793425,nssv1794416,nssv1793430,nssv1792279,nssv1792270,nssv1793450,nssv1793442,nssv1793464,nssv1794421,nssv1794418,nssv1793443,nssv1793471,nssv1793440,nssv1793465,nssv1794424,nssv1793468,nssv1793434,nssv1793470,nssv1793447,nssv1792280,nssv1792269,nssv1793457,nssv1793435,nssv1793478,nssv1793420,nssv1794417,nssv1793462,nssv1793474,nssv1793484,nssv1793486,nssv1792277,nssv1793488,nssv1793453,nssv1792278,nssv1793459,nssv1793489,nssv1793458,nssv1793490,nssv1793477,nssv1792275,nssv1792281,nssv1793467,nssv1792273,nssv1792272,nssv1793445,nssv1793466,nssv1793441,nssv1793483,nssv1793460 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv160897 1 145859232 145859232 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179475 M 24 "" esv1133506 1 145859255 145859317 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3741765 M 2 0 1 "" HuRef nsv946311 1 145874408 145881749 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792363,nssv1792317,nssv1792300,nssv1792314,nssv1792297,nssv1792375,nssv1792290,nssv1792373,nssv1792283,nssv1792341,nssv1792285,nssv1792322,nssv1792313,nssv1792357,nssv1792360,nssv1792351,nssv1792362,nssv1792343,nssv1792368,nssv1792358,nssv1792361,nssv1792345,nssv1792286,nssv1792312,nssv1792288,nssv1792350,nssv1792291,nssv1792348,nssv1792301,nssv1792339,nssv1792303,nssv1792346,nssv1792293,nssv1792318,nssv1792295,nssv1792353,nssv1792310,nssv1792329,nssv1792367,nssv1792308,nssv1792311,nssv1792330,nssv1792304,nssv1792323,nssv1792365,nssv1792371,nssv1792296,nssv1792327,nssv1792292,nssv1792335,nssv1792306,nssv1792376,nssv1792287,nssv1792315,nssv1792307,nssv1792331,nssv1792359,nssv1792333,nssv1792298,nssv1792349,nssv1792289,nssv1792342,nssv1792284,nssv1792378,nssv1792299,nssv1792337,nssv1792364,nssv1792326,nssv1792366,nssv1792377,nssv1792302,nssv1792344,nssv1792294,nssv1792320,nssv1792374,nssv1792334,nssv1792338,nssv1792324,nssv1792319,nssv1792340,nssv1792321,nssv1792372,nssv1792316,nssv1792352,nssv1792356,nssv1792282,nssv1792336,nssv1792325,nssv1792305,nssv1792369,nssv1792370,nssv1792332,nssv1792347,nssv1792328,nssv1792355,nssv1792354,nssv1792309 M 97 10 0 GPR89B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv511130 1 145908598 146050577 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626476 M 1 0 1 GPR89B,GPR89C,NBPF10,NBPF11,NBPF24,NBPF8,PDZK1P1 1 nsv946312 1 145909947 145931088 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792388,nssv1792387,nssv1792385,nssv1792383,nssv1792382,nssv1792380,nssv1792381,nssv1792389,nssv1792386,nssv1792379,nssv1792384 M 97 10 0 GPR89B,GPR89C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8180 1 145950469 145952416 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23705 M 31 0 1 PDZK1P1 NA19173 nsv946313 1 145953539 145992428 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792402,nssv1792413,nssv1792398,nssv1792466,nssv1792400,nssv1792477,nssv1792391,nssv1792463,nssv1792471,nssv1792433,nssv1792395,nssv1792460,nssv1792399,nssv1792436,nssv1792469,nssv1792425,nssv1792470,nssv1792465,nssv1792403,nssv1792481,nssv1792419,nssv1792429,nssv1792408,nssv1792480,nssv1792472,nssv1792456,nssv1792394,nssv1792451,nssv1792405,nssv1792430,nssv1792392,nssv1792459,nssv1792396,nssv1792453,nssv1792411,nssv1792449,nssv1792393,nssv1792447,nssv1792397,nssv1792437,nssv1792412,nssv1792431,nssv1792409,nssv1792455,nssv1792473,nssv1792461,nssv1792421,nssv1792416,nssv1792418,nssv1792454,nssv1792414,nssv1792458,nssv1792467,nssv1792390,nssv1792401,nssv1792441,nssv1792468,nssv1792439,nssv1792415,nssv1792457,nssv1792475,nssv1792420,nssv1792406,nssv1792432,nssv1792476,nssv1792443,nssv1792407,nssv1792445,nssv1792404,nssv1792426,nssv1792410,nssv1792484,nssv1792474,nssv1792479,nssv1792435,nssv1792438,nssv1792423,nssv1792448,nssv1792485,nssv1792446,nssv1792422,nssv1792482,nssv1792442,nssv1792440,nssv1792486,nssv1792427,nssv1792417,nssv1792434,nssv1792428,nssv1792452,nssv1792464,nssv1792462,nssv1792424,nssv1792450,nssv1792444,nssv1792478,nssv1792483 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946315 1 145992428 145997289 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1792495,nssv1792514,nssv1792489,nssv1792487,nssv1792492,nssv1792521,nssv1792494,nssv1792537,nssv1792560,nssv1792553,nssv1792497,nssv1792510,nssv1792566,nssv1792530,nssv1792558,nssv1792533,nssv1792505,nssv1792525,nssv1792488,nssv1792517,nssv1792491,nssv1792544,nssv1792500,nssv1792548,nssv1792493,nssv1792550,nssv1792490,nssv1792527,nssv1792559,nssv1792546,nssv1792499,nssv1792556,nssv1792502,nssv1792522,nssv1792516,nssv1792526,nssv1792506,nssv1792555,nssv1792496,nssv1792528,nssv1792563,nssv1792541,nssv1792562,nssv1792547,nssv1792509,nssv1792551,nssv1792561,nssv1792540,nssv1792518,nssv1792536,nssv1792511,nssv1792538,nssv1792512,nssv1792513,nssv1792498,nssv1792554,nssv1792557,nssv1792534,nssv1792503,nssv1792532,nssv1792565,nssv1792552,nssv1792515,nssv1792542,nssv1792501,nssv1792535,nssv1792508,nssv1792520,nssv1792504,nssv1792519,nssv1792564,nssv1792545,nssv1792507,nssv1792539,nssv1792549,nssv1792531,nssv1792523,nssv1792529,nssv1792524,nssv1792543 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946316 1 145997289 146000380 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794190,nssv1794197,nssv1794184,nssv1794153,nssv1794126,nssv1794166,nssv1794112,nssv1794169,nssv1794128,nssv1794141,nssv1794124,nssv1794167,nssv1794115,nssv1794173,nssv1794136,nssv1794170,nssv1794187,nssv1794177,nssv1794108,nssv1794145,nssv1794193,nssv1794164,nssv1794189,nssv1794198,nssv1794186,nssv1794133,nssv1794127,nssv1792567,nssv1794111,nssv1794157,nssv1794121,nssv1794158,nssv1794135,nssv1794165,nssv1794125,nssv1794203,nssv1794138,nssv1794199,nssv1794188,nssv1794181,nssv1794122,nssv1794159,nssv1794118,nssv1794174,nssv1794185,nssv1794183,nssv1794191,nssv1794150,nssv1794113,nssv1794160,nssv1794132,nssv1794171,nssv1794116,nssv1794182,nssv1794120,nssv1794201,nssv1794192,nssv1794200,nssv1794131,nssv1794175,nssv1794109,nssv1794156,nssv1794114,nssv1794154,nssv1794129,nssv1794194,nssv1794119,nssv1794144,nssv1794110,nssv1794176,nssv1794123,nssv1794179,nssv1794117,nssv1794146,nssv1794152,nssv1794162,nssv1794134,nssv1794147,nssv1794178,nssv1794140,nssv1794202,nssv1794155,nssv1794142,nssv1794163,nssv1794149,nssv1794130,nssv1794196,nssv1794139,nssv1794148,nssv1794137,nssv1794143,nssv1794172,nssv1794161,nssv1794180,nssv1794195,nssv1794151,nssv1794168 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946317 1 146000380 146003020 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794210,nssv1794247,nssv1794213,nssv1794241,nssv1794211,nssv1794214,nssv1794207,nssv1794212,nssv1794206,nssv1794243,nssv1794227,nssv1794244,nssv1794208,nssv1794216,nssv1794239,nssv1794242,nssv1794249,nssv1794220,nssv1794233,nssv1794245,nssv1794248,nssv1794235,nssv1794246,nssv1794232,nssv1794228,nssv1794225,nssv1794224,nssv1794229,nssv1794236,nssv1794234,nssv1794240,nssv1794218,nssv1794250,nssv1794222,nssv1794231,nssv1794205,nssv1794237,nssv1794221,nssv1794215,nssv1794217,nssv1794230,nssv1794251,nssv1794238,nssv1794219,nssv1794223,nssv1794209,nssv1794226,nssv1794204 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946318 1 146004219 146019699 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794261,nssv1794256,nssv1794259,nssv1794262,nssv1794258,nssv1794260,nssv1794254,nssv1794257,nssv1794255,nssv1794253,nssv1794252 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946319 1 146019699 146117762 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794265,nssv1793511,nssv1794285,nssv1793527,nssv1794282,nssv1794322,nssv1794268,nssv1794290,nssv1794284,nssv1793503,nssv1793523,nssv1794300,nssv1794271,nssv1794299,nssv1794266,nssv1794307,nssv1793518,nssv1793534,nssv1794274,nssv1794308,nssv1793520,nssv1794295,nssv1793516,nssv1793531,nssv1793524,nssv1794289,nssv1794280,nssv1794316,nssv1794270,nssv1794301,nssv1794264,nssv1793507,nssv1794281,nssv1794314,nssv1794267,nssv1794317,nssv1794273,nssv1794320,nssv1794277,nssv1794293,nssv1794291,nssv1794297,nssv1794292,nssv1794323,nssv1794283,nssv1793530,nssv1794272,nssv1794326,nssv1794294,nssv1794313,nssv1793517,nssv1794325,nssv1794269,nssv1793528,nssv1794275,nssv1794324,nssv1794278,nssv1794327,nssv1793522,nssv1793505,nssv1794276,nssv1794306,nssv1794287,nssv1794315,nssv1793515,nssv1794309,nssv1793521,nssv1794263,nssv1793519,nssv1794321,nssv1794288,nssv1794318,nssv1794279,nssv1793526,nssv1794310,nssv1793525,nssv1794302,nssv1793512,nssv1793506,nssv1793504,nssv1793508,nssv1794305,nssv1793532,nssv1794296,nssv1794298,nssv1793509,nssv1793514,nssv1794312,nssv1793529,nssv1793510,nssv1794303,nssv1794304,nssv1794286,nssv1794311,nssv1793533,nssv1794319,nssv1793513 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv511157 1 146021951 146050577 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626077 M 1 0 1 NBPF10,NBPF11,NBPF24,NBPF8 1 nsv946833 1 146039990 146042651 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591972,nssv2591985,nssv2592026,nssv2591995,nssv2591967,nssv2591977,nssv2591981,nssv2591973,nssv2591966,nssv2592008,nssv2591979,nssv2592006,nssv2592029,nssv2591997,nssv2591962,nssv2592012,nssv2591953,nssv2592005,nssv2591955,nssv2592000,nssv2591963,nssv2591988,nssv2591970,nssv2592018,nssv2591974,nssv2592003,nssv2591964,nssv2591993,nssv2591952,nssv2591986,nssv2592022,nssv2591999,nssv2591959,nssv2591976,nssv2592027,nssv2592010,nssv2592024,nssv2592001,nssv2591971,nssv2592004,nssv2591969,nssv2592017,nssv2592023,nssv2592009,nssv2591982,nssv2592019,nssv2591978,nssv2591992,nssv2592025,nssv2590718,nssv2590719,nssv2592014,nssv2591957,nssv2591991,nssv2591968,nssv2592016,nssv2592020,nssv2591983,nssv2591961,nssv2591998,nssv2591965,nssv2592011,nssv2591960,nssv2591994,nssv2591958,nssv2591984,nssv2591975,nssv2592013,nssv2591956,nssv2591990,nssv2592028,nssv2591980,nssv2591954,nssv2592015,nssv2592021,nssv2592007,nssv2591996,nssv2591987,nssv2591989,nssv2592002 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv24256 1 146041182 146069318 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17865,esv15697 M 40 6 0 NBPF10,NBPF11,NBPF24,NBPF8 NA11993,NA15510,NA18502,NA18916,NA19099,NA19225 nsv946834 1 146042651 146043335 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592041,nssv2592069,nssv2592050,nssv2592082,nssv2592054,nssv2592087,nssv2592056,nssv2592094,nssv2592046,nssv2592076,nssv2592059,nssv2592091,nssv2592044,nssv2592089,nssv2592071,nssv2592093,nssv2592112,nssv2592083,nssv2592047,nssv2592090,nssv2592116,nssv2592068,nssv2592058,nssv2592097,nssv2592053,nssv2592105,nssv2592064,nssv2592075,nssv2592033,nssv2592072,nssv2592120,nssv2592042,nssv2592115,nssv2592081,nssv2592062,nssv2592039,nssv2592040,nssv2592108,nssv2592118,nssv2592092,nssv2592043,nssv2592107,nssv2592057,nssv2592080,nssv2592073,nssv2592109,nssv2592052,nssv2592031,nssv2592037,nssv2592077,nssv2592048,nssv2592036,nssv2592074,nssv2592099,nssv2592051,nssv2592103,nssv2592114,nssv2592096,nssv2592061,nssv2592030,nssv2592070,nssv2592088,nssv2592119,nssv2592100,nssv2592049,nssv2592106,nssv2592034,nssv2592078,nssv2592063,nssv2592104,nssv2592045,nssv2592111,nssv2592038,nssv2592102,nssv2592117,nssv2592032,nssv2592060,nssv2592085,nssv2592067,nssv2592065,nssv2592121,nssv2592079,nssv2592113,nssv2592084,nssv2592066,nssv2592035,nssv2592055,nssv2592110,nssv2592098,nssv2592086,nssv2592095,nssv2592101 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946835 1 146043335 146045941 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592165,nssv2592122,nssv2592143,nssv2592170,nssv2592139,nssv2592159,nssv2592151,nssv2592163,nssv2592162,nssv2592199,nssv2592129,nssv2592184,nssv2592207,nssv2592133,nssv2592140,nssv2592175,nssv2592204,nssv2592178,nssv2592147,nssv2592198,nssv2592150,nssv2592183,nssv2592137,nssv2592126,nssv2592210,nssv2592123,nssv2592208,nssv2592186,nssv2592145,nssv2592196,nssv2592211,nssv2592180,nssv2592209,nssv2592156,nssv2592138,nssv2592168,nssv2592157,nssv2592202,nssv2592154,nssv2592190,nssv2592136,nssv2592171,nssv2592206,nssv2592188,nssv2592158,nssv2592187,nssv2592153,nssv2592179,nssv2592146,nssv2592185,nssv2592125,nssv2592189,nssv2592161,nssv2592160,nssv2592152,nssv2592201,nssv2592155,nssv2592172,nssv2592205,nssv2592167,nssv2592124,nssv2592213,nssv2592144,nssv2592200,nssv2592149,nssv2592193,nssv2592132,nssv2592127,nssv2592131,nssv2592194,nssv2592134,nssv2592166,nssv2592135,nssv2592177,nssv2592203,nssv2592130,nssv2592164,nssv2592197,nssv2592128,nssv2592181,nssv2592148,nssv2592173,nssv2592141,nssv2592192,nssv2592142,nssv2592174,nssv2592212,nssv2592191,nssv2592182,nssv2592195,nssv2592176,nssv2592169 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946836 1 146045941 146047302 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591199,nssv2591205,nssv2592228,nssv2592225,nssv2591240,nssv2591201,nssv2591238,nssv2591232,nssv2591243,nssv2591200,nssv2591185,nssv2592215,nssv2591239,nssv2591219,nssv2592226,nssv2591228,nssv2591187,nssv2591211,nssv2592224,nssv2591216,nssv2592223,nssv2591194,nssv2591192,nssv2591212,nssv2591191,nssv2591190,nssv2591198,nssv2591218,nssv2591244,nssv2591202,nssv2591186,nssv2591227,nssv2591196,nssv2591206,nssv2591178,nssv2591210,nssv2591179,nssv2591213,nssv2591180,nssv2591224,nssv2592227,nssv2591223,nssv2592230,nssv2591220,nssv2591188,nssv2592222,nssv2591184,nssv2591225,nssv2592220,nssv2591235,nssv2592221,nssv2591236,nssv2591237,nssv2591247,nssv2591177,nssv2591234,nssv2591246,nssv2591203,nssv2591175,nssv2592219,nssv2592231,nssv2591215,nssv2592217,nssv2591193,nssv2592216,nssv2591222,nssv2591241,nssv2592214,nssv2591174,nssv2591217,nssv2591189,nssv2591197,nssv2591176,nssv2591204,nssv2591182,nssv2591208,nssv2591245,nssv2591209,nssv2591181,nssv2591226,nssv2591183,nssv2591207,nssv2591195,nssv2591233,nssv2592229,nssv2591214,nssv2591242,nssv2591229,nssv2591230,nssv2591231,nssv2592218,nssv2591221 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946837 1 146047302 146048021 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591284,nssv2591297,nssv2591251,nssv2591313,nssv2591263,nssv2591256,nssv2591261,nssv2591312,nssv2591332,nssv2591318,nssv2591270,nssv2591326,nssv2591333,nssv2591327,nssv2591267,nssv2592263,nssv2591264,nssv2591294,nssv2591262,nssv2591315,nssv2591260,nssv2591248,nssv2591329,nssv2591316,nssv2591335,nssv2591308,nssv2591277,nssv2591252,nssv2591254,nssv2591253,nssv2591250,nssv2591303,nssv2592261,nssv2591306,nssv2591283,nssv2591307,nssv2591269,nssv2591325,nssv2592262,nssv2591298,nssv2591331,nssv2591259,nssv2591334,nssv2591296,nssv2591271,nssv2591322,nssv2591278,nssv2591302,nssv2591288,nssv2591310,nssv2591265,nssv2591324,nssv2591273,nssv2591301,nssv2591287,nssv2591319,nssv2591275,nssv2591323,nssv2591279,nssv2591286,nssv2591276,nssv2591311,nssv2591266,nssv2591285,nssv2591268,nssv2591295,nssv2591280,nssv2591289,nssv2591257,nssv2591282,nssv2591281,nssv2591305,nssv2592260,nssv2591300,nssv2591272,nssv2591314,nssv2591290,nssv2591309,nssv2591255,nssv2591292,nssv2591258,nssv2591299,nssv2591291,nssv2591320,nssv2591330,nssv2591304,nssv2591274,nssv2591249,nssv2591293,nssv2591321,nssv2591328,nssv2591317 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946838 1 146048021 146049711 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592285,nssv2592329,nssv2592282,nssv2592301,nssv2592271,nssv2592312,nssv2592339,nssv2592328,nssv2592288,nssv2592315,nssv2592293,nssv2592309,nssv2592334,nssv2592318,nssv2592343,nssv2592305,nssv2592335,nssv2592298,nssv2592270,nssv2592307,nssv2592296,nssv2592333,nssv2592275,nssv2592317,nssv2592281,nssv2592327,nssv2592292,nssv2592304,nssv2592274,nssv2592303,nssv2592286,nssv2592316,nssv2592266,nssv2592302,nssv2592338,nssv2592323,nssv2592268,nssv2592332,nssv2592340,nssv2592290,nssv2592336,nssv2592294,nssv2592269,nssv2592322,nssv2592289,nssv2592297,nssv2592279,nssv2592306,nssv2592295,nssv2592325,nssv2592342,nssv2592314,nssv2592337,nssv2592321,nssv2592265,nssv2592330,nssv2592277,nssv2592287,nssv2592278,nssv2592264,nssv2592284,nssv2592331,nssv2592283,nssv2592311,nssv2592341,nssv2592299,nssv2592280,nssv2592324,nssv2592276,nssv2592326,nssv2592267,nssv2592313,nssv2592273,nssv2592320,nssv2592272,nssv2592308,nssv2592300,nssv2592319,nssv2592291,nssv2592310 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946839 1 146049711 146068320 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592366,nssv2592399,nssv2592373,nssv2592382,nssv2592423,nssv2592344,nssv2592357,nssv2592408,nssv2592350,nssv2592389,nssv2592415,nssv2592379,nssv2592365,nssv2592394,nssv2592376,nssv2592391,nssv2592362,nssv2592392,nssv2592422,nssv2592374,nssv2592356,nssv2592384,nssv2592414,nssv2592385,nssv2592361,nssv2592387,nssv2592363,nssv2592404,nssv2592360,nssv2592400,nssv2592368,nssv2592388,nssv2592418,nssv2592402,nssv2592351,nssv2592381,nssv2592348,nssv2592406,nssv2592420,nssv2592371,nssv2592349,nssv2592377,nssv2592419,nssv2592412,nssv2592345,nssv2592413,nssv2592417,nssv2592397,nssv2592355,nssv2592380,nssv2592369,nssv2592409,nssv2592347,nssv2592393,nssv2592416,nssv2592398,nssv2592359,nssv2592367,nssv2592375,nssv2592395,nssv2592353,nssv2592383,nssv2592352,nssv2592403,nssv2592358,nssv2592370,nssv2592354,nssv2592411,nssv2592364,nssv2592405,nssv2592421,nssv2592410,nssv2592372,nssv2592390,nssv2592346,nssv2592396,nssv2592407,nssv2592378,nssv2592401,nssv2592386 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946840 1 146073902 146082102 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592426,nssv2592425,nssv2592433,nssv2592432,nssv2592434,nssv2592429,nssv2592427,nssv2592424,nssv2592431,nssv2592428,nssv2592430 M 97 10 0 NBPF10,NBPF11,NBPF24,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946320 1 146118367 146125032 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793556,nssv1793599,nssv1793540,nssv1793591,nssv1793543,nssv1793593,nssv1793544,nssv1793572,nssv1793563,nssv1793571,nssv1793555,nssv1793573,nssv1793537,nssv1793535,nssv1793549,nssv1793600,nssv1793608,nssv1793589,nssv1793614,nssv1793590,nssv1793613,nssv1793580,nssv1793548,nssv1793579,nssv1793605,nssv1793568,nssv1793606,nssv1793565,nssv1793553,nssv1793586,nssv1793539,nssv1793598,nssv1793545,nssv1793569,nssv1793564,nssv1793561,nssv1793612,nssv1793596,nssv1793607,nssv1793604,nssv1793541,nssv1793597,nssv1793566,nssv1793592,nssv1793550,nssv1793581,nssv1793536,nssv1793567,nssv1793609,nssv1793578,nssv1793554,nssv1793585,nssv1793546,nssv1793602,nssv1793610,nssv1793562,nssv1793559,nssv1793582,nssv1793542,nssv1793588,nssv1793560,nssv1793601,nssv1793547,nssv1793603,nssv1793538,nssv1793595,nssv1793611,nssv1793575,nssv1793551,nssv1793574,nssv1793557,nssv1793558,nssv1793552,nssv1793576,nssv1793570,nssv1793594,nssv1793584,nssv1793587,nssv1793577,nssv1793583 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946321 1 146127494 146136606 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793620,nssv1793670,nssv1793643,nssv1793672,nssv1793636,nssv1793638,nssv1793635,nssv1793690,nssv1793622,nssv1793688,nssv1793623,nssv1793710,nssv1793629,nssv1793671,nssv1793692,nssv1793667,nssv1793695,nssv1793657,nssv1793628,nssv1793651,nssv1793617,nssv1793673,nssv1793701,nssv1793704,nssv1793700,nssv1793669,nssv1793627,nssv1793642,nssv1793633,nssv1793660,nssv1793619,nssv1793653,nssv1793693,nssv1793659,nssv1793621,nssv1793615,nssv1793634,nssv1793680,nssv1793644,nssv1793648,nssv1793616,nssv1793647,nssv1793630,nssv1793677,nssv1793618,nssv1793652,nssv1793624,nssv1793711,nssv1793625,nssv1793645,nssv1793698,nssv1793676,nssv1793626,nssv1793662,nssv1793697,nssv1793666,nssv1793694,nssv1793678,nssv1793639,nssv1793649,nssv1793646,nssv1793663,nssv1793699,nssv1793650,nssv1793640,nssv1793705,nssv1793637,nssv1793641,nssv1793631,nssv1793684,nssv1793632,nssv1793679,nssv1793696,nssv1793674,nssv1793661,nssv1793707,nssv1793708,nssv1793703,nssv1793685,nssv1793675,nssv1793658,nssv1793665,nssv1793702,nssv1793668,nssv1793681,nssv1793682,nssv1793683,nssv1793687,nssv1793706,nssv1793689,nssv1793655,nssv1793691,nssv1793656,nssv1793709,nssv1793686,nssv1793664,nssv1793654 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946322 1 146147634 146156370 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793717,nssv1793747,nssv1793733,nssv1793783,nssv1793732,nssv1793784,nssv1793723,nssv1793763,nssv1793792,nssv1793760,nssv1793726,nssv1793735,nssv1793724,nssv1793771,nssv1793715,nssv1794725,nssv1793740,nssv1794730,nssv1793798,nssv1794724,nssv1793797,nssv1793768,nssv1793796,nssv1793754,nssv1793716,nssv1793745,nssv1793725,nssv1793767,nssv1793730,nssv1793764,nssv1793719,nssv1793770,nssv1793718,nssv1794731,nssv1793790,nssv1793787,nssv1793789,nssv1793756,nssv1793720,nssv1793742,nssv1793737,nssv1793750,nssv1793731,nssv1793777,nssv1793713,nssv1793749,nssv1793736,nssv1793785,nssv1793743,nssv1793712,nssv1793722,nssv1793766,nssv1793794,nssv1793748,nssv1793791,nssv1793757,nssv1793727,nssv1793739,nssv1793741,nssv1793774,nssv1793793,nssv1793769,nssv1793714,nssv1794727,nssv1793728,nssv1793779,nssv1793734,nssv1793752,nssv1793795,nssv1793761,nssv1793721,nssv1793746,nssv1793729,nssv1793738,nssv1794732,nssv1793744,nssv1793775,nssv1793781,nssv1794728,nssv1793773,nssv1793788,nssv1793755,nssv1793776,nssv1793765,nssv1793758,nssv1794726,nssv1793772,nssv1794729,nssv1793762,nssv1793759,nssv1793753,nssv1793782,nssv1793751,nssv1793780,nssv1793778,nssv1793786,nssv1793799 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2758968 1 146151735 148262603 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756863,esv2757754 M 270 206 61 BOLA1,FCGR1A,FCGR1C,HIST2H2AA3,HIST2H2AA4,HIST2H2AB,HIST2H2AC,HIST2H2BC,HIST2H2BE,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B,LINC00623,LINC00869,LINC01138,LOC100130000,LOC101929780,LOC388692,LOC645166,MIR5087,MIR6077-1,MIR6077-2,MTMR11,NBPF10,NBPF14,NBPF15,NBPF16,NBPF23,NBPF8,NBPF9,OTUD7B,PPIAL4A,PPIAL4C,PPIAL4D,PPIAL4E,PPIAL4F,SF3B4,SV2A NA06985,NA06991,NA06993,NA06994,NA07000,NA07019,NA07022,NA07029,NA07034,NA07048,NA07055,NA07056,NA07345,NA07348,NA07357,NA10830,NA10831,NA10838,NA10839,NA10846,NA10851,NA10854,NA10855,NA10856,NA10857,NA10859,NA10860,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11993,NA11995,NA12003,NA12004,NA12005,NA12044,NA12056,NA12057,NA12144,NA12145,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12707,NA12716,NA12717,NA12740,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12762,NA12763,NA12812,NA12813,NA12814,NA12815,NA12864,NA12865,NA12872,NA12873,NA12874,NA12875,NA12878,NA12891,NA18500,NA18501,NA18502,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18515,NA18516,NA18517,NA18522,NA18523,NA18524,NA18526,NA18529,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18623,NA18624,NA18632,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18870,NA18871,NA18872,NA18912,NA18913,NA18914,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18949,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19092,NA19093,NA19094,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19116,NA19119,NA19120,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19192,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19209,NA19210,NA19211,NA19221,NA19222,NA19223,NA19238,NA19239,NA19240 nsv510984 1 146159250 146456367 OTHER inversion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624363 M 4 0 0 LINC01138,LOC100130000,MIR5087,MIR6077-1,MIR6077-2,NBPF10,NBPF8,PPIAL4A NA18994 nsv831448 1 146164977 146329018 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1449928 M 95 0 1 MIR5087,MIR6077-1,MIR6077-2,NBPF10,NBPF8 nsv946323 1 146167314 146173900 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794814,nssv1794767,nssv1794810,nssv1794782,nssv1794738,nssv1794797,nssv1794740,nssv1794783,nssv1794752,nssv1794776,nssv1794762,nssv1794733,nssv1794746,nssv1794801,nssv1794754,nssv1794827,nssv1794741,nssv1794786,nssv1794748,nssv1794789,nssv1794817,nssv1794821,nssv1794815,nssv1794766,nssv1794750,nssv1794803,nssv1794813,nssv1794822,nssv1794819,nssv1794781,nssv1794811,nssv1794804,nssv1794751,nssv1794802,nssv1794742,nssv1794794,nssv1794737,nssv1794826,nssv1794764,nssv1794820,nssv1794749,nssv1794774,nssv1794734,nssv1794760,nssv1794755,nssv1794828,nssv1794816,nssv1794792,nssv1794747,nssv1794785,nssv1794818,nssv1794772,nssv1794758,nssv1794805,nssv1794745,nssv1794800,nssv1794743,nssv1794770,nssv1794761,nssv1794756,nssv1794753,nssv1794768,nssv1794735,nssv1794775,nssv1794736,nssv1794824,nssv1794812,nssv1794763,nssv1794757,nssv1794779,nssv1794744,nssv1794806,nssv1794739,nssv1794777,nssv1794809,nssv1794808,nssv1794799,nssv1794787,nssv1794784,nssv1794773,nssv1794807,nssv1794829,nssv1794795,nssv1794825,nssv1794798,nssv1794780,nssv1794796,nssv1794791,nssv1794759,nssv1794793,nssv1794769,nssv1794771,nssv1794765,nssv1794823,nssv1794788,nssv1794790,nssv1794778 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547679 1 146173316 146325568 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723085 M 17421 0 1 MIR5087,NBPF10,NBPF8 nsv946841 1 146173900 146176032 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592435,nssv2592438,nssv2592436,nssv2592442,nssv2592440,nssv2592444,nssv2592439,nssv2592437,nssv2592443,nssv2592445,nssv2592441 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2569215 1 146174107 146196263 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5212793 M 1 1 0 NBPF10,NBPF8 NA18507 nsv946324 1 146176032 146248363 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794915,nssv1794882,nssv1794849,nssv1794868,nssv1794859,nssv1794875,nssv1794907,nssv1794920,nssv1794835,nssv1794926,nssv1794843,nssv1794893,nssv1794837,nssv1794894,nssv1794851,nssv1794898,nssv1794912,nssv1794866,nssv1794847,nssv1794895,nssv1794839,nssv1794880,nssv1794845,nssv1794877,nssv1794914,nssv1794917,nssv1794846,nssv1794899,nssv1794910,nssv1794873,nssv1794834,nssv1794863,nssv1794916,nssv1794886,nssv1794840,nssv1794883,nssv1794848,nssv1794918,nssv1794831,nssv1794919,nssv1794908,nssv1794864,nssv1794913,nssv1794830,nssv1794838,nssv1794879,nssv1794833,nssv1794924,nssv1794852,nssv1794891,nssv1794844,nssv1794865,nssv1794858,nssv1794902,nssv1794861,nssv1794878,nssv1794842,nssv1794876,nssv1794855,nssv1794889,nssv1794836,nssv1794872,nssv1794911,nssv1794871,nssv1794850,nssv1794901,nssv1794854,nssv1794897,nssv1794832,nssv1794857,nssv1794841,nssv1794900,nssv1794909,nssv1794921,nssv1794925,nssv1794905,nssv1794903,nssv1794869,nssv1794896,nssv1794884,nssv1794862,nssv1794906,nssv1794890,nssv1794881,nssv1794887,nssv1794904,nssv1794870,nssv1794853,nssv1794860,nssv1794867,nssv1794892,nssv1794885,nssv1794922,nssv1794874,nssv1794856,nssv1794888,nssv1794923 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv336n100 1 146179628 146297795 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013285,nsv999451 M 29084 4 4 MIR5087,NBPF10,NBPF8 dgv337n100 1 146179628 146822076 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003955,nsv1004831 M 29084 0 2 LINC01138,LOC100130000,LOC101929780,MIR5087,MIR6077-1,MIR6077-2,NBPF10,NBPF14,NBPF8,NBPF9,PPIAL4A,PPIAL4D,PPIAL4E,PPIAL4F dgv535n54 1 146180676 146294453 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547680,nsv547681 M 17421 2 0 MIR5087,NBPF10,NBPF8 nsv1009417 1 146191347 146297795 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487174 M 29084 1 0 MIR5087,NBPF10,NBPF8 esv3418878 1 146197154 146826275 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808916 M 185 0 0 LINC01138,LOC100130000,LOC101929780,MIR5087,MIR6077-1,MIR6077-2,NBPF10,NBPF14,NBPF15,NBPF8,NBPF9,PPIAL4A,PPIAL4D,PPIAL4E,PPIAL4F NA12878 nsv547682 1 146202411 146293282 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723088 M 17421 0 1 MIR5087,NBPF10,NBPF8 esv2750803 1 146202411 147495710 CNV gain Pinto_et_al_2007 17911159 SNP array essv6986065,essv6982027 M 771 2 0 LINC01138,LOC100130000,LOC101929780,LOC645166,MIR5087,MIR6077-1,MIR6077-2,NBPF10,NBPF14,NBPF15,NBPF16,NBPF23,NBPF8,NBPF9,PPIAL4A,PPIAL4D,PPIAL4E,PPIAL4F BEC_514 nsv428235 1 146202523 148257137 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv451498,nssv451864,nssv451875,nssv451520,nssv451853,nssv451775,nssv451487,nssv451886,nssv451764,nssv451753,nssv451720,nssv451820,nssv451842,nssv451476,nssv451698,nssv451742,nssv451576,nssv451564,nssv451786,nssv451731,nssv451709,nssv451809,nssv451509,nssv451831,nssv451553,nssv451531,nssv451542,nssv451798,nssv451465 M 62 25 0 BOLA1,FCGR1A,FCGR1C,HIST2H2AA3,HIST2H2AA4,HIST2H2AB,HIST2H2AC,HIST2H2BC,HIST2H2BE,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B,LINC00623,LINC00869,LINC01138,LOC100130000,LOC101929780,LOC388692,LOC645166,MIR5087,MIR6077-1,MIR6077-2,MTMR11,NBPF10,NBPF14,NBPF15,NBPF16,NBPF23,NBPF8,NBPF9,OTUD7B,PPIAL4A,PPIAL4C,PPIAL4D,PPIAL4E,PPIAL4F,SF3B4,SV2A HGDP00449,HGDP00450,HGDP00460,HGDP00462,HGDP00463,HGDP00471,HGDP00472,HGDP00473,HGDP00476,HGDP00478,HGDP00984,HGDP00986,HGDP01086,HGDP01087,HGDP01088,HGDP01089,HGDP01093,HGDP01094,NA18498,NA18916,NA19096,NA19108,NA19113,NA19181,NA19257 esv3894134 1 146209659 146325557 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779165 M 3017 0 1 MIR5087,NBPF10,NBPF8 esv8312 1 146216835 146259198 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30753 M 1 0 0 NBPF10,NBPF8 dgv72n67 1 146218376 146226566 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824498,nsv824487 M 31 0 2 NBPF10,NBPF8 NA18592,NA18942 esv6374 1 146219055 146242375 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv28815 M 1 0 0 NBPF10,NBPF8 nsv8191 1 146219241 146221816 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24906 M 31 1 0 NBPF10,NBPF8 NA19221 nsv8202 1 146239815 146257038 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25186,nssv21072,nssv18066 M 31 3 0 NBPF10,NBPF8 NA10863,NA18502,NA19221 esv2796 1 146242204 146242269 OTHER inversion Wang_et_al_2008 18987735 Sequencing essv25237 M 1 0 0 NBPF10,NBPF8 YH nsv946326 1 146252347 146289424 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794429,nssv1794498,nssv1794487,nssv1794927,nssv1794432,nssv1794481,nssv1794932,nssv1794469,nssv1794431,nssv1794452,nssv1794940,nssv1794445,nssv1794935,nssv1794443,nssv1794937,nssv1794456,nssv1794435,nssv1794497,nssv1794491,nssv1794479,nssv1794427,nssv1794458,nssv1794488,nssv1794437,nssv1794490,nssv1794483,nssv1794496,nssv1794447,nssv1794428,nssv1794505,nssv1794931,nssv1794433,nssv1794493,nssv1794442,nssv1794489,nssv1794454,nssv1794438,nssv1794506,nssv1794430,nssv1794436,nssv1794439,nssv1794464,nssv1794930,nssv1794500,nssv1794942,nssv1794477,nssv1794941,nssv1794440,nssv1794494,nssv1794485,nssv1794934,nssv1794476,nssv1794933,nssv1794501,nssv1794938,nssv1794475,nssv1794426,nssv1794484,nssv1794929,nssv1794486,nssv1794441,nssv1794467,nssv1794928,nssv1794448,nssv1794492,nssv1794455,nssv1794434,nssv1794446,nssv1794495,nssv1794461,nssv1794936,nssv1794444,nssv1794939,nssv1794472,nssv1794470,nssv1794502,nssv1794453,nssv1794468,nssv1794474,nssv1794473,nssv1794460,nssv1794466,nssv1794463,nssv1794503,nssv1794457,nssv1794478,nssv1794465,nssv1794449,nssv1794482,nssv1794480,nssv1794450,nssv1794504,nssv1794499,nssv1794451,nssv1794462,nssv1794459,nssv1794471 M 97 10 0 MIR5087,NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2020060 1 146263155 146263601 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4702156 M 1 0 1 NBPF10,NBPF8 NA18507 nsv441712 1 146273899 146275557 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656750,nssv1656751,nssv1656752 M 270 0 3 NBPF10,NBPF8 NA19101,NA19103,NA19138 dgv7e55 1 146276990 147980523 CNV loss Pinto_et_al_2007 17911159 SNP array esv2750806,esv2750805,esv2750804 M 771 0 6 FCGR1C,LINC00623,LINC00869,LINC01138,LOC100130000,LOC101929780,LOC388692,LOC645166,MIR6077-1,MIR6077-2,NBPF10,NBPF14,NBPF15,NBPF16,NBPF23,NBPF8,NBPF9,PPIAL4A,PPIAL4C,PPIAL4D,PPIAL4E,PPIAL4F BEC_53,BEC_607,BEC_74 esv2750807 1 146288629 148142748 CNV gain Pinto_et_al_2007 17911159 SNP array essv6988890,essv6985104,essv6985102,essv6985103,essv6987154 M 771 5 0 BOLA1,FCGR1A,FCGR1C,HIST2H2AA3,HIST2H2AA4,HIST2H2AB,HIST2H2AC,HIST2H2BC,HIST2H2BE,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B,LINC00623,LINC00869,LINC01138,LOC100130000,LOC101929780,LOC388692,LOC645166,MIR6077-1,MIR6077-2,NBPF10,NBPF14,NBPF15,NBPF16,NBPF23,NBPF8,NBPF9,PPIAL4A,PPIAL4C,PPIAL4D,PPIAL4E,PPIAL4F,SV2A SPC_1 nsv946327 1 146293733 146342638 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794526,nssv1794601,nssv1794509,nssv1794556,nssv1794590,nssv1794583,nssv1794584,nssv1794563,nssv1794514,nssv1794564,nssv1794529,nssv1794546,nssv1794589,nssv1794542,nssv1794523,nssv1794596,nssv1794528,nssv1794579,nssv1794591,nssv1794533,nssv1794515,nssv1794540,nssv1794585,nssv1794537,nssv1794532,nssv1794539,nssv1794588,nssv1794594,nssv1794586,nssv1794568,nssv1794536,nssv1794559,nssv1794587,nssv1794507,nssv1794593,nssv1794595,nssv1794525,nssv1794553,nssv1794518,nssv1794600,nssv1794511,nssv1794547,nssv1794592,nssv1794555,nssv1794521,nssv1794578,nssv1794517,nssv1794602,nssv1794535,nssv1794549,nssv1794513,nssv1794548,nssv1794527,nssv1794576,nssv1794512,nssv1794534,nssv1794522,nssv1794552,nssv1794510,nssv1794544,nssv1794516,nssv1794566,nssv1794524,nssv1794580,nssv1794520,nssv1794551,nssv1794531,nssv1794530,nssv1794519,nssv1794582,nssv1794508,nssv1794561,nssv1794538,nssv1794603,nssv1794598,nssv1794567,nssv1794573,nssv1794543,nssv1794558,nssv1794572,nssv1794574,nssv1794545,nssv1794581,nssv1794541,nssv1794597,nssv1794599,nssv1794569,nssv1794565,nssv1794571,nssv1794570,nssv1794550,nssv1794562,nssv1794557,nssv1794577,nssv1794575,nssv1794560,nssv1794554 M 97 10 0 LOC100130000,MIR6077-1,MIR6077-2,NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv338n100 1 146295838 147513027 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006067,nsv1003201,nsv1010836 M 29084 0 3 LINC01138,LOC100130000,LOC101929780,LOC645166,MIR6077-1,MIR6077-2,NBPF10,NBPF14,NBPF15,NBPF16,NBPF23,NBPF8,NBPF9,PPIAL4A,PPIAL4D,PPIAL4E,PPIAL4F nsv1014163 1 146297795 147513027 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497386 M 29084 1 0 LINC01138,LOC100130000,LOC101929780,LOC645166,MIR6077-1,MIR6077-2,NBPF10,NBPF14,NBPF15,NBPF16,NBPF23,NBPF8,NBPF9,PPIAL4A,PPIAL4D,PPIAL4E,PPIAL4F nsv8214 1 146323154 146327168 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21408 M 31 1 0 MIR6077-1,MIR6077-2,NBPF10,NBPF8 NA18564 esv23584 1 146349000 146492617 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10217,esv19962,esv11963,esv18233 M 40 16 0 LINC01138,LOC100130000,NBPF10,NBPF8,PPIAL4A NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12239,NA12414,NA12749,NA12878,NA15510,NA18505,NA19099,NA19114,NA19225,NA19240 nsv946328 1 146349584 146352095 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794617,nssv1794653,nssv1794612,nssv1794652,nssv1794620,nssv1794647,nssv1794611,nssv1794631,nssv1794674,nssv1794672,nssv1794609,nssv1794665,nssv1794623,nssv1794660,nssv1794625,nssv1794604,nssv1794679,nssv1794643,nssv1794677,nssv1794645,nssv1794606,nssv1794656,nssv1794621,nssv1794637,nssv1794626,nssv1794644,nssv1794683,nssv1794646,nssv1794633,nssv1794650,nssv1794632,nssv1794673,nssv1794675,nssv1794648,nssv1794608,nssv1794663,nssv1794678,nssv1794639,nssv1794618,nssv1794657,nssv1794629,nssv1794655,nssv1794615,nssv1794641,nssv1794616,nssv1794649,nssv1794635,nssv1794627,nssv1794624,nssv1794670,nssv1794682,nssv1794671,nssv1794610,nssv1794636,nssv1794676,nssv1794658,nssv1794605,nssv1794640,nssv1794622,nssv1794666,nssv1794681,nssv1794634,nssv1794613,nssv1794642,nssv1794628,nssv1794664,nssv1794607,nssv1794651,nssv1794619,nssv1794661,nssv1794680,nssv1794638,nssv1794614,nssv1794662,nssv1794669,nssv1794630,nssv1794659,nssv1794654,nssv1794667,nssv1794668 M 97 10 0 LOC100130000,NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946329 1 146352095 146375771 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794689,nssv1795880,nssv1794703,nssv1795862,nssv1795891,nssv1795856,nssv1794705,nssv1795904,nssv1794697,nssv1795876,nssv1795893,nssv1795858,nssv1794692,nssv1794684,nssv1794700,nssv1795881,nssv1794701,nssv1795877,nssv1794693,nssv1795855,nssv1794698,nssv1795871,nssv1794706,nssv1795878,nssv1794709,nssv1795889,nssv1795894,nssv1795890,nssv1794702,nssv1794717,nssv1794712,nssv1795887,nssv1795900,nssv1794711,nssv1794694,nssv1795879,nssv1794686,nssv1795859,nssv1794715,nssv1795854,nssv1794691,nssv1795910,nssv1795895,nssv1795906,nssv1794687,nssv1795861,nssv1795898,nssv1794719,nssv1795896,nssv1795873,nssv1794713,nssv1795905,nssv1794695,nssv1795867,nssv1795899,nssv1795882,nssv1794690,nssv1794707,nssv1795897,nssv1795860,nssv1794688,nssv1795868,nssv1794704,nssv1794723,nssv1795892,nssv1795875,nssv1794699,nssv1795907,nssv1794708,nssv1795865,nssv1794685,nssv1795872,nssv1794696,nssv1795903,nssv1795883,nssv1794721,nssv1795864,nssv1795886,nssv1794714,nssv1795888,nssv1795908,nssv1794716,nssv1795884,nssv1795885,nssv1795869,nssv1794720,nssv1794722,nssv1795857,nssv1795909,nssv1795866,nssv1794710,nssv1794718,nssv1795874,nssv1795870,nssv1795901,nssv1795902,nssv1795863 M 97 10 0 LINC01138,LOC100130000,NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8225 1 146379568 146483371 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19766,nssv20083,nssv21768,nssv23070,nssv21758,nssv19759,nssv22098,nssv18757,nssv17405,nssv22088,nssv22428,nssv18426,nssv19429,nssv26567,nssv20089,nssv17079,nssv17075,nssv21077,nssv19095,nssv18442,nssv20402,nssv18071,nssv19083,nssv20747,nssv19090,nssv24880,nssv20417,nssv17755 M 31 20 0 LINC01138,NBPF10,NBPF8,PPIAL4A NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18504,NA18517,NA18537,NA18563,NA18564,NA18572,NA18942,NA18972,NA18980,NA19007 dgv10n82 1 146379638 146433167 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946842,nsv946330 M 97 10 0 LINC01138,NBPF10,NBPF8,PPIAL4A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3409390 1 146382452 146385850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691940 M 185 1 0 LINC01138,NBPF10,NBPF8 NA12891 esv3343902 1 146384352 146385850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691941 M 185 1 0 LINC01138,NBPF10,NBPF8 NA12878 dgv4e203 1 146395960 148068057 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array esv2763691,esv2764251 M 1109 73 218 FCGR1A,FCGR1C,HIST2H2BF,HIST2H3D,LINC00623,LINC00869,LINC01138,LOC101929780,LOC388692,LOC645166,NBPF10,NBPF14,NBPF15,NBPF16,NBPF23,NBPF8,NBPF9,PPIAL4A,PPIAL4C,PPIAL4D,PPIAL4E,PPIAL4F RW_0003,RW_0006,RW_0007,RW_0010,RW_0011,RW_0024,RW_0034,RW_0080,RW_0085,RW_0092,RW_0095,RW_0100,RW_0104,RW_0106,RW_0107,RW_0108,RW_0112,RW_0117,RW_0120,RW_0121,RW_0122,RW_0125,RW_0129,RW_0131,RW_0144,RW_0145,RW_0155,RW_0158,RW_0164,RW_0171,RW_0173,RW_0175,RW_0178,RW_0201,RW_0204,RW_0205,RW_0209,RW_0218,RW_0230,RW_0233,RW_0237,RW_0248,RW_0250,RW_0252,RW_0253,RW_0260,RW_0263,RW_0268,RW_0275,RW_0276,RW_0277,RW_0278,RW_0285,RW_0286,RW_0299,RW_0300,RW_0304,RW_0305,RW_0309,RW_0323,RW_0324,RW_0325,RW_0331,RW_0334,RW_0356,RW_0359,RW_0505,RW_0508,RW_0509,RW_0515,RW_0522,RW_0531,RW_0532,RW_0533,RW_0536,RW_0538,RW_0543,RW_0546,RW_0548,RW_0553,RW_0568,RW_0574,RW_0579,RW_0590,RW_0594,RW_0604,RW_0606,RW_0609,RW_0610,RW_0623,RW_0624,RW_0627,RW_0637,RW_0640,RW_0648,RW_0653,RW_0665,SW_0005,SW_0006,SW_0008,SW_0016,SW_0018,SW_0021,SW_0031,SW_0045,SW_0046,SW_0049,SW_0060,SW_0063,SW_0077,SW_0085,SW_0090,SW_0099,SW_0101,SW_0119,SW_0143,SW_0145,SW_0146,SW_0147,SW_0155,SW_0169,SW_0170,SW_0172,SW_0186,SW_0189,SW_0190,SW_0191,SW_0199,SW_0211,SW_0215,SW_0242,SW_0257,SW_0286,SW_0313,SW_0323,SW_0341,SW_0354,SW_0370,SW_0379,SW_0507,SW_0509,SW_0570,SW_0577,SW_0594,SW_0604,SW_0605,SW_0606,SW_0618,SW_0619,SW_0620,SW_0623,SW_0624,SW_0628,SW_0631,SW_0632,SW_0635,SW_0638,SW_0660,SW_0702,SW_0771,SW_0775,SW_0804,SW_0805,SW_0818,SW_0829,SW_0833,SW_0836,SW_0843,SW_0846,SW_0847,SW_0859,SW_0861,SW_0869,SW_0887,SW_0889,SW_0891,SW_1003,SW_1004,SW_1009,SW_1013,SW_1020,SW_1023,SW_1026,SW_1027,SW_1028,SW_1039,SW_1044,SW_1051,SW_1054,SW_1055,SW_1062,SW_1066,SW_1067,SW_1068,SW_1072,SW_1074,SW_1093,SW_1101,SW_1105,SW_1106,SW_1108,SW_1114,SW_1118,SW_1130,SW_1132,SW_1139,SW_1144,SW_1148,SW_1153,SW_1157,SW_1175,SW_1188,SW_1198,SW_1199,SW_1205,SW_1208,SW_1211,SW_1212,SW_1220,SW_1221,SW_1232,SW_1236,SW_1240,SW_1250,SW_1254,SW_1259,SW_1263,SW_1264,SW_1270,SW_1272,SW_1275,SW_1276,SW_1278,SW_1281,SW_1283,SW_1286,SW_1290,SW_1292,SW_1293,SW_1294,SW_1304,SW_1309,SW_1313,SW_1315,SW_1322,SW_1323,SW_1332,SW_1334,SW_1335,SW_1346,SW_1354,SW_1358,SW_1361,SW_1365,SW_1366,SW_1372,SW_1378,SW_1392,SW_1397,SW_1404,SW_1409,SW_1415,SW_1417,SW_1424,SW_1425,SW_1427,SW_1433,SW_1436,SW_1437,SW_1440,SW_1443,SW_1447,SW_1455,SW_1456,SW_1459,SW_1460,SW_1469,SW_1472,SW_1475,SW_1482,SW_1501,SW_1505,SW_1508,SW_1509,SW_1511,SW_1523,SW_1527,SW_1539,SW_1551 nsv547683 1 146397003 146413356 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723089 M 17421 0 1 LINC01138,NBPF10,NBPF8 nsv547684 1 146409913 146470277 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723090 M 17421 0 1 NBPF10,NBPF8,PPIAL4A nsv946843 1 146424169 146441371 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592461,nssv2592464,nssv2592458,nssv2592467,nssv2592457,nssv2592466,nssv2592465,nssv2592459,nssv2592462,nssv2592460,nssv2592463 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946331 1 146435017 146492767 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796019,nssv1796072,nssv1796011,nssv1792913,nssv1792904,nssv1796057,nssv1796013,nssv1796041,nssv1792900,nssv1792894,nssv1792906,nssv1792907,nssv1796016,nssv1796062,nssv1796029,nssv1796038,nssv1792899,nssv1792915,nssv1796020,nssv1792909,nssv1796030,nssv1792908,nssv1796024,nssv1796056,nssv1796028,nssv1796067,nssv1792901,nssv1796068,nssv1796023,nssv1792892,nssv1796021,nssv1796071,nssv1796015,nssv1796047,nssv1796012,nssv1796049,nssv1796025,nssv1792885,nssv1792905,nssv1792890,nssv1796037,nssv1796050,nssv1796018,nssv1796046,nssv1796027,nssv1792911,nssv1796039,nssv1792896,nssv1796026,nssv1796054,nssv1796017,nssv1792893,nssv1796014,nssv1792886,nssv1796010,nssv1796070,nssv1792903,nssv1796052,nssv1796009,nssv1792889,nssv1792902,nssv1796065,nssv1792898,nssv1796043,nssv1796032,nssv1796060,nssv1796022,nssv1792895,nssv1792897,nssv1792916,nssv1796033,nssv1796064,nssv1796036,nssv1796035,nssv1796045,nssv1796055,nssv1796042,nssv1796048,nssv1796066,nssv1792910,nssv1796053,nssv1796008,nssv1796044,nssv1796031,nssv1796051,nssv1796063,nssv1796061,nssv1792887,nssv1796069,nssv1796034,nssv1796058,nssv1796040,nssv1792914,nssv1792891,nssv1796059,nssv1792888,nssv1792912 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2755 1 146443453 146478956 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11043,nssv2461,nssv7576,nssv3286 M 9 4 0 NBPF10,NBPF8 NA12156,NA12878,NA15510,NA18555 nsv946844 1 146451983 146456244 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592513,nssv2592500,nssv2592531,nssv2592540,nssv2592510,nssv2592492,nssv2592528,nssv2592545,nssv2592515,nssv2592543,nssv2592506,nssv2592484,nssv2592530,nssv2592486,nssv2592498,nssv2592485,nssv2592533,nssv2592471,nssv2592491,nssv2592496,nssv2592524,nssv2592497,nssv2592523,nssv2592490,nssv2592501,nssv2592478,nssv2592537,nssv2592546,nssv2592529,nssv2592499,nssv2592495,nssv2592481,nssv2592494,nssv2592480,nssv2592526,nssv2592538,nssv2592468,nssv2592472,nssv2592516,nssv2592493,nssv2592520,nssv2592469,nssv2592519,nssv2592539,nssv2592505,nssv2592473,nssv2592522,nssv2592470,nssv2592525,nssv2592547,nssv2592511,nssv2592541,nssv2592518,nssv2592489,nssv2592521,nssv2592476,nssv2592512,nssv2592482,nssv2592532,nssv2592542,nssv2592527,nssv2592483,nssv2592502,nssv2592475,nssv2592535,nssv2592477,nssv2592504,nssv2592544,nssv2592514,nssv2592479,nssv2592536,nssv2592474,nssv2592534,nssv2592487,nssv2592517,nssv2592488,nssv2592509,nssv2592503,nssv2592507,nssv2592508 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946845 1 146460617 146470711 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592564,nssv2593536,nssv2593549,nssv2593508,nssv2592563,nssv2593504,nssv2593543,nssv2593528,nssv2593501,nssv2593530,nssv2593551,nssv2593510,nssv2592561,nssv2593533,nssv2593496,nssv2593540,nssv2593493,nssv2593517,nssv2592565,nssv2593518,nssv2593548,nssv2593522,nssv2593492,nssv2593495,nssv2593550,nssv2593509,nssv2592560,nssv2593521,nssv2592551,nssv2593502,nssv2592554,nssv2593513,nssv2593546,nssv2593519,nssv2593503,nssv2593532,nssv2593545,nssv2593516,nssv2592562,nssv2593526,nssv2592557,nssv2593523,nssv2592553,nssv2593535,nssv2592566,nssv2593512,nssv2593547,nssv2593525,nssv2593494,nssv2593531,nssv2593542,nssv2593511,nssv2593544,nssv2593514,nssv2592550,nssv2592548,nssv2592552,nssv2593527,nssv2592558,nssv2593537,nssv2592567,nssv2593507,nssv2593497,nssv2593505,nssv2592559,nssv2593499,nssv2592549,nssv2593538,nssv2592556,nssv2593539,nssv2592555,nssv2593506,nssv2593500,nssv2593524,nssv2593498,nssv2593541,nssv2593534,nssv2593515,nssv2593520,nssv2593529 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv208e59 1 146469752 146483050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3356390,esv3436568,esv3424850,esv3342944,esv3346649,esv3362902 M 185 6 0 NBPF10,NBPF8 NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv946846 1 146470711 146471836 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2590870,nssv2590906,nssv2590869,nssv2590910,nssv2590868,nssv2590922,nssv2590927,nssv2590896,nssv2590865,nssv2590900,nssv2590930,nssv2590921,nssv2590866,nssv2590895,nssv2590861,nssv2590894,nssv2590871,nssv2590901,nssv2590858,nssv2590904,nssv2590932,nssv2590889,nssv2590928,nssv2590912,nssv2590887,nssv2590909,nssv2590884,nssv2590908,nssv2590935,nssv2590924,nssv2590860,nssv2590893,nssv2590881,nssv2590913,nssv2590878,nssv2590882,nssv2590888,nssv2590907,nssv2590931,nssv2590856,nssv2590874,nssv2590914,nssv2590929,nssv2590897,nssv2590867,nssv2590915,nssv2590872,nssv2590903,nssv2590926,nssv2590892,nssv2590873,nssv2590918,nssv2590863,nssv2590902,nssv2590862,nssv2590917,nssv2590885,nssv2590916,nssv2590859,nssv2590883,nssv2590876,nssv2590891,nssv2590875,nssv2590923,nssv2590864,nssv2590919,nssv2590877,nssv2593552,nssv2590880,nssv2590890,nssv2590934,nssv2590898,nssv2590933,nssv2590920,nssv2590857,nssv2590899,nssv2590879,nssv2590886,nssv2590925,nssv2590911,nssv2590905 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv11n82 1 146471836 146473970 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946847,nsv946848 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946850 1 146473353 146474470 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591651,nssv2591653,nssv2591654,nssv2591645,nssv2591648,nssv2591650,nssv2591655,nssv2591646,nssv2591647,nssv2591649,nssv2591652 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946851 1 146473970 146474470 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591707,nssv2591669,nssv2591722,nssv2591677,nssv2591695,nssv2591681,nssv2591656,nssv2591731,nssv2591686,nssv2591663,nssv2591698,nssv2591668,nssv2591716,nssv2591735,nssv2591718,nssv2591728,nssv2591701,nssv2591664,nssv2591713,nssv2591671,nssv2591704,nssv2591675,nssv2591714,nssv2591733,nssv2591697,nssv2591732,nssv2591693,nssv2591667,nssv2591691,nssv2591726,nssv2591710,nssv2591657,nssv2591723,nssv2591688,nssv2591702,nssv2591660,nssv2591690,nssv2591730,nssv2591696,nssv2591672,nssv2591717,nssv2591727,nssv2591689,nssv2591687,nssv2591736,nssv2591665,nssv2591700,nssv2591678,nssv2591683,nssv2591680,nssv2591720,nssv2591658,nssv2591724,nssv2591734,nssv2591703,nssv2591662,nssv2591711,nssv2591685,nssv2591708,nssv2591684,nssv2591705,nssv2591666,nssv2591721,nssv2591670,nssv2591694,nssv2591673,nssv2591699,nssv2591674,nssv2591679,nssv2591659,nssv2591682,nssv2591729,nssv2591709,nssv2591676,nssv2591712,nssv2591661,nssv2591725,nssv2591719,nssv2591715,nssv2591692,nssv2591706 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946852 1 146474470 146476634 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591809,nssv2591781,nssv2591766,nssv2591792,nssv2591765,nssv2591782,nssv2591759,nssv2591798,nssv2591810,nssv2591818,nssv2591742,nssv2591787,nssv2591755,nssv2591828,nssv2591816,nssv2591786,nssv2591812,nssv2591822,nssv2591757,nssv2591780,nssv2591746,nssv2591773,nssv2591743,nssv2591785,nssv2591823,nssv2591794,nssv2591815,nssv2591789,nssv2591814,nssv2591783,nssv2591758,nssv2591764,nssv2591739,nssv2591800,nssv2591752,nssv2591784,nssv2591747,nssv2591774,nssv2591745,nssv2591806,nssv2591751,nssv2591776,nssv2591750,nssv2591817,nssv2591756,nssv2591763,nssv2591754,nssv2591797,nssv2591748,nssv2591771,nssv2591769,nssv2591799,nssv2591768,nssv2591796,nssv2591811,nssv2591772,nssv2591813,nssv2591803,nssv2591820,nssv2591788,nssv2591744,nssv2591778,nssv2591740,nssv2591770,nssv2591753,nssv2591805,nssv2591741,nssv2591825,nssv2591762,nssv2591791,nssv2591808,nssv2591821,nssv2591738,nssv2591767,nssv2591824,nssv2591790,nssv2591761,nssv2591779,nssv2591826,nssv2591777,nssv2591807,nssv2591793,nssv2591749,nssv2591801,nssv2591819,nssv2591760,nssv2591827,nssv2591804,nssv2591775,nssv2591795,nssv2591802,nssv2591737 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv35 1 146476038 146477425 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv35 M 1 1 0 NBPF10,NBPF8 NA15510 nsv946853 1 146476634 146477343 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591854,nssv2591894,nssv2591840,nssv2591883,nssv2591846,nssv2591889,nssv2591841,nssv2591918,nssv2591905,nssv2591897,nssv2591843,nssv2591881,nssv2591834,nssv2591892,nssv2591850,nssv2591893,nssv2591902,nssv2591915,nssv2591858,nssv2591873,nssv2591842,nssv2591852,nssv2591830,nssv2591896,nssv2591845,nssv2591862,nssv2591831,nssv2591865,nssv2591861,nssv2591898,nssv2591903,nssv2591869,nssv2591919,nssv2591888,nssv2591857,nssv2591882,nssv2591904,nssv2591880,nssv2591847,nssv2591887,nssv2591836,nssv2591895,nssv2591907,nssv2591867,nssv2591848,nssv2591909,nssv2591833,nssv2591875,nssv2591844,nssv2591910,nssv2591913,nssv2591877,nssv2591839,nssv2591868,nssv2591912,nssv2591914,nssv2591916,nssv2591876,nssv2591920,nssv2591856,nssv2591908,nssv2591885,nssv2591901,nssv2591874,nssv2591835,nssv2591863,nssv2591837,nssv2591859,nssv2591899,nssv2591879,nssv2591917,nssv2591890,nssv2591860,nssv2591884,nssv2591906,nssv2591891,nssv2591832,nssv2591886,nssv2591900,nssv2591871,nssv2591849,nssv2591872,nssv2591838,nssv2591911,nssv2591853,nssv2591829,nssv2591851,nssv2591878,nssv2591855,nssv2591866,nssv2591870,nssv2591864 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946854 1 146477343 146478014 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592922,nssv2592902,nssv2591923,nssv2592897,nssv2591924,nssv2592900,nssv2591938,nssv2592877,nssv2591932,nssv2592913,nssv2592923,nssv2592887,nssv2591941,nssv2592912,nssv2592876,nssv2592899,nssv2591949,nssv2591951,nssv2591926,nssv2591944,nssv2592917,nssv2591481,nssv2592921,nssv2592880,nssv2591928,nssv2592896,nssv2591930,nssv2592898,nssv2591945,nssv2592891,nssv2591927,nssv2592895,nssv2591942,nssv2592901,nssv2591943,nssv2592908,nssv2591937,nssv2592881,nssv2592919,nssv2592910,nssv2591931,nssv2592882,nssv2591934,nssv2592894,nssv2591940,nssv2592905,nssv2591933,nssv2592886,nssv2591922,nssv2592878,nssv2592915,nssv2592904,nssv2592920,nssv2592907,nssv2591939,nssv2592888,nssv2592924,nssv2591948,nssv2591929,nssv2592879,nssv2592916,nssv2592906,nssv2591936,nssv2592884,nssv2591946,nssv2592909,nssv2591950,nssv2592883,nssv2591925,nssv2592911,nssv2591935,nssv2592903,nssv2592918,nssv2592892,nssv2592893,nssv2591921,nssv2592889,nssv2591947,nssv2592914,nssv2592885,nssv2592890 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946855 1 146477343 146479262 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591484,nssv2591490,nssv2591488,nssv2591482,nssv2591492,nssv2591483,nssv2591485,nssv2591486,nssv2591491,nssv2591487,nssv2591489 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946857 1 146478014 146480042 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591501,nssv2591528,nssv2591504,nssv2591527,nssv2591526,nssv2591554,nssv2591500,nssv2591544,nssv2591505,nssv2591539,nssv2591497,nssv2591548,nssv2591513,nssv2591537,nssv2591523,nssv2591557,nssv2591508,nssv2591543,nssv2591572,nssv2591553,nssv2591509,nssv2591551,nssv2591519,nssv2591517,nssv2591498,nssv2591536,nssv2591506,nssv2591552,nssv2591516,nssv2591541,nssv2591565,nssv2591534,nssv2591511,nssv2591538,nssv2591495,nssv2591559,nssv2591573,nssv2591542,nssv2591514,nssv2591521,nssv2591569,nssv2591549,nssv2591522,nssv2591524,nssv2591567,nssv2591532,nssv2591507,nssv2591547,nssv2591564,nssv2591556,nssv2591571,nssv2591560,nssv2591570,nssv2591540,nssv2591518,nssv2591546,nssv2591510,nssv2591520,nssv2591568,nssv2591535,nssv2591499,nssv2591561,nssv2591503,nssv2591550,nssv2591515,nssv2591533,nssv2591525,nssv2591529,nssv2591512,nssv2591555,nssv2591502,nssv2591558,nssv2591566,nssv2591563,nssv2591496,nssv2591530,nssv2591562,nssv2591545,nssv2591494,nssv2591531 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946858 1 146479262 146480042 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2591585,nssv2591574,nssv2591578,nssv2591575,nssv2591577,nssv2591579,nssv2591581,nssv2591580,nssv2591584,nssv2591576,nssv2591582,nssv2591583 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946859 1 146480042 146480542 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592600,nssv2591629,nssv2591604,nssv2591619,nssv2591618,nssv2591642,nssv2591594,nssv2591634,nssv2591587,nssv2592579,nssv2592597,nssv2591631,nssv2592592,nssv2591630,nssv2591597,nssv2591586,nssv2591605,nssv2591640,nssv2592587,nssv2591613,nssv2591617,nssv2592571,nssv2592581,nssv2592575,nssv2592583,nssv2591635,nssv2591593,nssv2591612,nssv2591608,nssv2592594,nssv2591590,nssv2592590,nssv2592586,nssv2591626,nssv2591611,nssv2591633,nssv2592589,nssv2592591,nssv2591589,nssv2592573,nssv2592588,nssv2591621,nssv2592599,nssv2592576,nssv2591595,nssv2592598,nssv2591592,nssv2591637,nssv2592582,nssv2591639,nssv2591607,nssv2592572,nssv2591601,nssv2592578,nssv2592580,nssv2592577,nssv2591598,nssv2591641,nssv2591599,nssv2592595,nssv2591600,nssv2592601,nssv2592584,nssv2592568,nssv2591610,nssv2591616,nssv2591606,nssv2591622,nssv2591614,nssv2591609,nssv2591596,nssv2591623,nssv2591588,nssv2591628,nssv2592593,nssv2592569,nssv2591603,nssv2591636,nssv2591602,nssv2591638,nssv2592585,nssv2591643,nssv2592596,nssv2591625,nssv2591591,nssv2592570,nssv2591615,nssv2592574,nssv2591632,nssv2591620,nssv2591624,nssv2591627 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946860 1 146480542 146481274 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592692,nssv2592645,nssv2592618,nssv2592656,nssv2592684,nssv2592636,nssv2592689,nssv2592659,nssv2592623,nssv2592632,nssv2592617,nssv2592649,nssv2592612,nssv2592658,nssv2592603,nssv2592646,nssv2592630,nssv2592602,nssv2592631,nssv2592654,nssv2592611,nssv2592663,nssv2592678,nssv2592625,nssv2592626,nssv2592647,nssv2592614,nssv2592671,nssv2592622,nssv2592657,nssv2592680,nssv2592664,nssv2592624,nssv2592660,nssv2592627,nssv2592651,nssv2592607,nssv2592667,nssv2592615,nssv2592655,nssv2592619,nssv2592665,nssv2592604,nssv2592648,nssv2592608,nssv2592629,nssv2592609,nssv2592639,nssv2592610,nssv2592643,nssv2592677,nssv2592666,nssv2592679,nssv2592683,nssv2592633,nssv2592690,nssv2592620,nssv2592669,nssv2592681,nssv2592637,nssv2592634,nssv2592640,nssv2592674,nssv2592693,nssv2592621,nssv2592653,nssv2592675,nssv2592661,nssv2592606,nssv2592638,nssv2592676,nssv2592635,nssv2592691,nssv2592652,nssv2592613,nssv2592686,nssv2592673,nssv2592642,nssv2592688,nssv2592682,nssv2592685,nssv2592644,nssv2592672,nssv2592668,nssv2592605,nssv2592687,nssv2592616,nssv2592670,nssv2592628,nssv2592650,nssv2592641,nssv2592662 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946861 1 146481274 146482483 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592726,nssv2592751,nssv2592784,nssv2592749,nssv2592715,nssv2592775,nssv2592696,nssv2592748,nssv2592710,nssv2592750,nssv2592723,nssv2592739,nssv2592716,nssv2592694,nssv2592766,nssv2592743,nssv2592718,nssv2592742,nssv2592706,nssv2592747,nssv2592700,nssv2592763,nssv2592781,nssv2592717,nssv2592711,nssv2592738,nssv2592783,nssv2592740,nssv2592777,nssv2592754,nssv2592769,nssv2592741,nssv2592705,nssv2592736,nssv2592773,nssv2592762,nssv2592697,nssv2592734,nssv2592725,nssv2592730,nssv2592704,nssv2592721,nssv2592764,nssv2592724,nssv2592701,nssv2592760,nssv2592709,nssv2592782,nssv2592770,nssv2592735,nssv2592772,nssv2592720,nssv2592695,nssv2592728,nssv2592719,nssv2592774,nssv2592776,nssv2592733,nssv2592780,nssv2592755,nssv2592712,nssv2592729,nssv2592713,nssv2592785,nssv2592699,nssv2592732,nssv2592714,nssv2592778,nssv2592708,nssv2592758,nssv2592722,nssv2592757,nssv2592707,nssv2592756,nssv2592703,nssv2592761,nssv2592698,nssv2592779,nssv2592702,nssv2592731,nssv2592771,nssv2592752,nssv2592765,nssv2592759,nssv2592768,nssv2592727,nssv2592767,nssv2592737,nssv2592753,nssv2592744,nssv2592746,nssv2592745 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv209e59 1 146483452 146490850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3443554,esv3350659 M 185 2 0 NBPF10,NBPF8 NA12878,NA19239 nsv946862 1 146484545 146492767 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592819,nssv2592852,nssv2592801,nssv2592817,nssv2592863,nssv2592849,nssv2592860,nssv2592842,nssv2592789,nssv2592787,nssv2592802,nssv2592828,nssv2592790,nssv2592853,nssv2592865,nssv2592838,nssv2592804,nssv2592833,nssv2592803,nssv2592851,nssv2592812,nssv2592844,nssv2592866,nssv2592827,nssv2592815,nssv2592855,nssv2592797,nssv2592841,nssv2592864,nssv2592850,nssv2592862,nssv2592854,nssv2592800,nssv2592822,nssv2592791,nssv2592856,nssv2592859,nssv2592814,nssv2592816,nssv2592824,nssv2592857,nssv2592839,nssv2592798,nssv2592848,nssv2592809,nssv2592836,nssv2592861,nssv2592845,nssv2592788,nssv2592846,nssv2592795,nssv2592834,nssv2592805,nssv2592825,nssv2592811,nssv2592840,nssv2592799,nssv2592835,nssv2592807,nssv2592830,nssv2592806,nssv2592810,nssv2592796,nssv2592837,nssv2592808,nssv2592820,nssv2592792,nssv2592823,nssv2592794,nssv2592813,nssv2592818,nssv2592832,nssv2592793,nssv2592847,nssv2592858,nssv2592843,nssv2592826,nssv2592821,nssv2592829,nssv2592831 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv29002 1 146542717 146716792 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv9895,esv20292,esv13562,esv10895,esv19440 M 40 12 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9,PPIAL4D,PPIAL4E,PPIAL4F NA11894,NA11993,NA11995,NA12004,NA12006,NA12239,NA12414,NA12749,NA15510,NA18523,NA18916,NA19099 dgv12n82 1 146543859 146560501 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946333,nsv946332 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv824509 1 146559993 146603274 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1428049 M 31 1 0 NBPF10,NBPF8,PPIAL4D,PPIAL4E,PPIAL4F AK10 nsv946334 1 146560501 146563009 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793023,nssv1793015,nssv1793021,nssv1793024,nssv1793020,nssv1793019,nssv1793017,nssv1793014,nssv1793016,nssv1793018,nssv1793022 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946337 1 146563009 146567052 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593808,nssv2593802,nssv2593811,nssv2593806,nssv2593804,nssv2593805,nssv2593809,nssv2593803,nssv2593810,nssv2593807,nssv2593812 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946335 1 146563009 146728138 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793030,nssv1793058,nssv1793040,nssv1793075,nssv1793033,nssv1793057,nssv1793026,nssv1793052,nssv1793038,nssv1793067,nssv1793045,nssv1793077,nssv1793039,nssv1793117,nssv1793105,nssv1793072,nssv1793056,nssv1793078,nssv1793111,nssv1793065,nssv1793037,nssv1793076,nssv1793103,nssv1793093,nssv1793053,nssv1793064,nssv1793043,nssv1793081,nssv1793029,nssv1793096,nssv1793028,nssv1793085,nssv1793050,nssv1793060,nssv1793034,nssv1793066,nssv1793035,nssv1793074,nssv1793031,nssv1793113,nssv1793107,nssv1793119,nssv1793044,nssv1793112,nssv1793109,nssv1793099,nssv1793110,nssv1793097,nssv1793032,nssv1793095,nssv1793027,nssv1793073,nssv1793106,nssv1793090,nssv1793049,nssv1793048,nssv1793046,nssv1793116,nssv1793054,nssv1793088,nssv1793036,nssv1793063,nssv1793047,nssv1793120,nssv1793108,nssv1793115,nssv1793041,nssv1793091,nssv1793042,nssv1793069,nssv1793104,nssv1793114,nssv1793102,nssv1793101,nssv1793098,nssv1793070,nssv1793100,nssv1793079,nssv1793025,nssv1793084,nssv1793061,nssv1793062,nssv1793121,nssv1793118,nssv1793092,nssv1793059,nssv1793089,nssv1793086,nssv1793087,nssv1793055,nssv1793082,nssv1793080,nssv1793083,nssv1793094,nssv1793051,nssv1793068,nssv1793071 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9,PPIAL4D,PPIAL4E,PPIAL4F HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946865 1 146571779 146588048 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593820,nssv2593819,nssv2593817,nssv2593814,nssv2593823,nssv2593818,nssv2593816,nssv2593822,nssv2593821,nssv2593815,nssv2593824 M 97 10 0 NBPF10,NBPF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv989001 1 146589696 146609796 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586700 M 3 0 1 NBPF10,NBPF8 HuRef esv3344945 1 146609852 146615050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691951 M 185 1 0 NBPF10,NBPF8 NA12878 nsv946866 1 146617100 146618861 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592239,nssv2593853,nssv2593871,nssv2593838,nssv2592251,nssv2593844,nssv2592236,nssv2593846,nssv2592244,nssv2593827,nssv2592247,nssv2593184,nssv2592242,nssv2592259,nssv2593859,nssv2593188,nssv2592253,nssv2593839,nssv2593855,nssv2593826,nssv2592252,nssv2593847,nssv2593857,nssv2593187,nssv2592234,nssv2593837,nssv2593861,nssv2593843,nssv2592241,nssv2593832,nssv2593851,nssv2593842,nssv2592237,nssv2593840,nssv2592233,nssv2593834,nssv2593852,nssv2592255,nssv2592232,nssv2593186,nssv2593860,nssv2592258,nssv2593825,nssv2593850,nssv2592238,nssv2593185,nssv2593868,nssv2593856,nssv2593866,nssv2593831,nssv2592249,nssv2593854,nssv2593863,nssv2593845,nssv2593867,nssv2593849,nssv2592240,nssv2592257,nssv2592246,nssv2593830,nssv2592250,nssv2593835,nssv2593869,nssv2592256,nssv2593870,nssv2593841,nssv2592245,nssv2593828,nssv2593858,nssv2593833,nssv2593862,nssv2593829,nssv2592235,nssv2593836,nssv2592248,nssv2592254,nssv2593864,nssv2593865,nssv2592243,nssv2593848 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv210e59 1 146617152 146645950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3369371,esv3351222 M 185 2 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19239,NA19240 dgv211e59 1 146617852 146695150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3393588,esv3350978,esv3428723,esv3449155 M 185 4 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA12878,NA12891,NA12892,NA19238 esv3336272 1 146618852 146621550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691955 M 185 1 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19239 nsv946867 1 146618861 146619646 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593280,nssv2593194,nssv2593208,nssv2593227,nssv2593276,nssv2593265,nssv2593274,nssv2593252,nssv2593278,nssv2593248,nssv2593222,nssv2593251,nssv2593196,nssv2593263,nssv2593223,nssv2593258,nssv2593192,nssv2593198,nssv2593205,nssv2593257,nssv2593219,nssv2593240,nssv2593273,nssv2593242,nssv2593272,nssv2593267,nssv2593199,nssv2593238,nssv2593197,nssv2593234,nssv2593214,nssv2593261,nssv2593232,nssv2593237,nssv2593202,nssv2593268,nssv2593225,nssv2593243,nssv2593209,nssv2593270,nssv2593211,nssv2593231,nssv2593275,nssv2593262,nssv2593212,nssv2593201,nssv2593200,nssv2593249,nssv2593217,nssv2593228,nssv2593229,nssv2593264,nssv2593226,nssv2593224,nssv2593221,nssv2593250,nssv2593279,nssv2593236,nssv2593277,nssv2593259,nssv2593206,nssv2593241,nssv2593215,nssv2593266,nssv2593218,nssv2593191,nssv2593230,nssv2593254,nssv2593204,nssv2593256,nssv2593216,nssv2593255,nssv2593271,nssv2593190,nssv2593213,nssv2593253,nssv2593207,nssv2593246,nssv2593193,nssv2593239,nssv2593210,nssv2593245,nssv2593203,nssv2593233,nssv2593220,nssv2593247,nssv2593244,nssv2593235,nssv2593269,nssv2593260,nssv2593189,nssv2593195 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946868 1 146619646 146620811 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593371,nssv2593340,nssv2593288,nssv2593344,nssv2593316,nssv2593337,nssv2593302,nssv2593315,nssv2593294,nssv2593360,nssv2593312,nssv2593335,nssv2593283,nssv2593357,nssv2593295,nssv2593325,nssv2593301,nssv2593281,nssv2593321,nssv2593343,nssv2593298,nssv2593289,nssv2593314,nssv2593359,nssv2593306,nssv2593331,nssv2593369,nssv2593346,nssv2593310,nssv2593352,nssv2593368,nssv2593356,nssv2593309,nssv2593329,nssv2593364,nssv2593334,nssv2593323,nssv2593351,nssv2593367,nssv2593361,nssv2593287,nssv2593354,nssv2593362,nssv2593332,nssv2593290,nssv2593322,nssv2593300,nssv2593358,nssv2593303,nssv2593350,nssv2593296,nssv2593339,nssv2593299,nssv2593285,nssv2593313,nssv2593336,nssv2593308,nssv2593328,nssv2593370,nssv2593341,nssv2593366,nssv2593333,nssv2593317,nssv2593291,nssv2593320,nssv2593326,nssv2593297,nssv2593345,nssv2593307,nssv2593327,nssv2593284,nssv2593282,nssv2593311,nssv2593319,nssv2593363,nssv2593349,nssv2593305,nssv2593292,nssv2593304,nssv2593355,nssv2593365,nssv2593330,nssv2593293,nssv2593347,nssv2593286,nssv2593353,nssv2593338,nssv2593324,nssv2593348,nssv2593342,nssv2593318 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946870 1 146620811 146622034 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593403,nssv2593410,nssv2593454,nssv2593429,nssv2593405,nssv2593438,nssv2593413,nssv2593426,nssv2593382,nssv2593407,nssv2593390,nssv2593432,nssv2593395,nssv2593437,nssv2593379,nssv2593420,nssv2593394,nssv2593378,nssv2593389,nssv2593444,nssv2593455,nssv2593423,nssv2593388,nssv2593373,nssv2593398,nssv2593453,nssv2593399,nssv2593431,nssv2593375,nssv2593428,nssv2593396,nssv2593381,nssv2593463,nssv2593446,nssv2593406,nssv2593433,nssv2593393,nssv2593384,nssv2593391,nssv2593441,nssv2593462,nssv2593448,nssv2593404,nssv2593374,nssv2593457,nssv2593435,nssv2593397,nssv2593417,nssv2593383,nssv2593411,nssv2593380,nssv2593447,nssv2593456,nssv2593449,nssv2593385,nssv2593421,nssv2593386,nssv2593451,nssv2593376,nssv2593450,nssv2593461,nssv2593442,nssv2593392,nssv2593418,nssv2593400,nssv2593452,nssv2593401,nssv2593440,nssv2593408,nssv2593425,nssv2593387,nssv2593434,nssv2593415,nssv2593436,nssv2593409,nssv2593424,nssv2593402,nssv2593427,nssv2593412,nssv2593445,nssv2593458,nssv2593419,nssv2593460,nssv2593430,nssv2593459,nssv2593422,nssv2593377,nssv2593414,nssv2593443,nssv2593416,nssv2593439 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946871 1 146622034 146622777 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593480,nssv2594432,nssv2594430,nssv2594465,nssv2594477,nssv2594426,nssv2594418,nssv2594429,nssv2594421,nssv2594460,nssv2593476,nssv2594462,nssv2594417,nssv2594456,nssv2594478,nssv2594461,nssv2594423,nssv2594458,nssv2594476,nssv2594434,nssv2593478,nssv2593465,nssv2593484,nssv2594425,nssv2594470,nssv2594451,nssv2594420,nssv2593472,nssv2594416,nssv2594444,nssv2593471,nssv2594454,nssv2593473,nssv2594447,nssv2593485,nssv2594422,nssv2594469,nssv2594433,nssv2594431,nssv2594440,nssv2594428,nssv2594468,nssv2594473,nssv2594463,nssv2594427,nssv2594455,nssv2593470,nssv2594457,nssv2593467,nssv2594464,nssv2594472,nssv2593475,nssv2593479,nssv2594442,nssv2593489,nssv2594441,nssv2593487,nssv2594466,nssv2594419,nssv2594450,nssv2593486,nssv2594459,nssv2593466,nssv2593468,nssv2594471,nssv2593474,nssv2593477,nssv2594435,nssv2593488,nssv2594453,nssv2594424,nssv2594445,nssv2594475,nssv2594443,nssv2593490,nssv2594448,nssv2593481,nssv2594467,nssv2594474,nssv2594437,nssv2593491,nssv2594439,nssv2593483,nssv2594438,nssv2593482,nssv2594449,nssv2593469,nssv2594452,nssv2594446,nssv2594436,nssv2593464 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946873 1 146622777 146623371 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594487,nssv2594484,nssv2594483,nssv2594481,nssv2594482,nssv2594480,nssv2594489,nssv2594488,nssv2594490,nssv2594485,nssv2594486 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946874 1 146622777 146624045 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594530,nssv2594492,nssv2594549,nssv2594515,nssv2594543,nssv2594508,nssv2594554,nssv2594562,nssv2594551,nssv2594516,nssv2594524,nssv2594498,nssv2594521,nssv2594568,nssv2594559,nssv2594505,nssv2594552,nssv2594497,nssv2594560,nssv2594512,nssv2594528,nssv2594493,nssv2594491,nssv2594570,nssv2594535,nssv2594511,nssv2594550,nssv2594503,nssv2594517,nssv2594510,nssv2594525,nssv2594564,nssv2594546,nssv2594507,nssv2594553,nssv2594522,nssv2594532,nssv2594496,nssv2594542,nssv2594499,nssv2594540,nssv2594513,nssv2594557,nssv2594565,nssv2594537,nssv2594502,nssv2594526,nssv2594500,nssv2594545,nssv2594519,nssv2594547,nssv2594520,nssv2594529,nssv2594569,nssv2594539,nssv2594523,nssv2594558,nssv2594504,nssv2594556,nssv2594495,nssv2594514,nssv2594566,nssv2594538,nssv2594501,nssv2594536,nssv2594506,nssv2594548,nssv2594509,nssv2594544,nssv2594494,nssv2594541,nssv2594561,nssv2594531,nssv2594563,nssv2594555,nssv2594567,nssv2594518,nssv2594534,nssv2594533,nssv2594527 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946875 1 146623371 146624045 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594579,nssv2594573,nssv2594578,nssv2594572,nssv2594575,nssv2594571,nssv2594581,nssv2594577,nssv2594582,nssv2594580,nssv2594574,nssv2594576 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946876 1 146624045 146625458 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594597,nssv2593584,nssv2593596,nssv2593579,nssv2593609,nssv2593571,nssv2594584,nssv2593606,nssv2593594,nssv2593586,nssv2594602,nssv2594613,nssv2594594,nssv2593574,nssv2594600,nssv2593581,nssv2593599,nssv2593580,nssv2593600,nssv2593567,nssv2594604,nssv2593565,nssv2593608,nssv2593582,nssv2593598,nssv2594609,nssv2594585,nssv2593601,nssv2594612,nssv2593569,nssv2593597,nssv2593554,nssv2594586,nssv2593576,nssv2594588,nssv2593575,nssv2593592,nssv2593557,nssv2593605,nssv2593568,nssv2593595,nssv2593573,nssv2594593,nssv2593583,nssv2594598,nssv2593607,nssv2593611,nssv2593561,nssv2594591,nssv2593610,nssv2594589,nssv2593563,nssv2594590,nssv2593562,nssv2593612,nssv2594610,nssv2594596,nssv2593555,nssv2594611,nssv2593556,nssv2594595,nssv2593566,nssv2593591,nssv2594583,nssv2594599,nssv2593577,nssv2594607,nssv2593558,nssv2594605,nssv2593603,nssv2593604,nssv2593589,nssv2594603,nssv2593602,nssv2594614,nssv2593588,nssv2594587,nssv2593578,nssv2594608,nssv2593572,nssv2594592,nssv2593564,nssv2593593,nssv2593570,nssv2594601,nssv2593585,nssv2593587,nssv2593553,nssv2593559,nssv2593590,nssv2594606,nssv2593560 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946877 1 146625458 146626583 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593615,nssv2593682,nssv2593622,nssv2593697,nssv2593642,nssv2593678,nssv2593687,nssv2593660,nssv2593637,nssv2593680,nssv2593617,nssv2593693,nssv2593619,nssv2593667,nssv2593623,nssv2593649,nssv2593614,nssv2593681,nssv2593638,nssv2593675,nssv2593620,nssv2593613,nssv2593691,nssv2593650,nssv2593700,nssv2593654,nssv2593631,nssv2593668,nssv2593629,nssv2593664,nssv2593618,nssv2593669,nssv2593699,nssv2593655,nssv2593684,nssv2593645,nssv2593685,nssv2593701,nssv2593627,nssv2593653,nssv2593633,nssv2593657,nssv2593692,nssv2593676,nssv2593702,nssv2593652,nssv2593696,nssv2593636,nssv2593625,nssv2593698,nssv2593641,nssv2593646,nssv2593683,nssv2593648,nssv2593688,nssv2593674,nssv2593686,nssv2593671,nssv2593628,nssv2593694,nssv2593644,nssv2593673,nssv2593616,nssv2593661,nssv2593703,nssv2593679,nssv2593626,nssv2593658,nssv2593632,nssv2593647,nssv2593621,nssv2593665,nssv2593689,nssv2593643,nssv2593695,nssv2593672,nssv2593690,nssv2593670,nssv2593634,nssv2593640,nssv2593630,nssv2593656,nssv2593624,nssv2593662,nssv2593635,nssv2593677,nssv2593639,nssv2593659,nssv2593663,nssv2593651,nssv2593666 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946879 1 146626583 146627424 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593729,nssv2593743,nssv2593710,nssv2593765,nssv2593780,nssv2593764,nssv2593778,nssv2593744,nssv2593736,nssv2593705,nssv2593727,nssv2593789,nssv2593733,nssv2593773,nssv2593788,nssv2593774,nssv2593782,nssv2593735,nssv2593783,nssv2593759,nssv2593716,nssv2593793,nssv2593730,nssv2593771,nssv2593706,nssv2593761,nssv2593776,nssv2593785,nssv2593718,nssv2593772,nssv2593726,nssv2593749,nssv2593707,nssv2593742,nssv2593714,nssv2593750,nssv2593791,nssv2593741,nssv2593734,nssv2593763,nssv2593708,nssv2593755,nssv2593792,nssv2593790,nssv2593713,nssv2593747,nssv2593784,nssv2593770,nssv2593725,nssv2593766,nssv2593777,nssv2593740,nssv2593721,nssv2593737,nssv2593779,nssv2593769,nssv2593720,nssv2593748,nssv2593711,nssv2593753,nssv2593717,nssv2593752,nssv2593781,nssv2593739,nssv2593715,nssv2593767,nssv2593724,nssv2593768,nssv2593722,nssv2593760,nssv2593719,nssv2593751,nssv2593712,nssv2593758,nssv2593795,nssv2593746,nssv2593723,nssv2593762,nssv2593787,nssv2593756,nssv2593709,nssv2593728,nssv2593794,nssv2593754,nssv2593775,nssv2593786,nssv2593732,nssv2593757,nssv2593731,nssv2593745,nssv2593738 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946880 1 146627424 146628018 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594732,nssv2594775,nssv2594735,nssv2594757,nssv2594745,nssv2594760,nssv2594743,nssv2594764,nssv2594811,nssv2594758,nssv2594749,nssv2594784,nssv2594791,nssv2594770,nssv2594794,nssv2594769,nssv2594725,nssv2594766,nssv2594727,nssv2594790,nssv2594798,nssv2594773,nssv2594731,nssv2594748,nssv2594741,nssv2594781,nssv2594752,nssv2594744,nssv2594738,nssv2594806,nssv2594739,nssv2594756,nssv2594792,nssv2594774,nssv2594730,nssv2594778,nssv2594746,nssv2594789,nssv2594729,nssv2594777,nssv2594724,nssv2594801,nssv2594742,nssv2594767,nssv2594740,nssv2594768,nssv2594733,nssv2594785,nssv2594803,nssv2594802,nssv2594728,nssv2594765,nssv2594807,nssv2594761,nssv2594726,nssv2594751,nssv2593798,nssv2594805,nssv2594734,nssv2594780,nssv2594808,nssv2594787,nssv2594810,nssv2593797,nssv2594750,nssv2594762,nssv2594796,nssv2594759,nssv2594799,nssv2594786,nssv2594793,nssv2594772,nssv2594753,nssv2594755,nssv2594737,nssv2594779,nssv2594736,nssv2594788,nssv2594797,nssv2594783,nssv2594800,nssv2594771,nssv2593799,nssv2594809,nssv2594804,nssv2594747,nssv2594795,nssv2594776,nssv2594782,nssv2594754,nssv2593796,nssv2594763 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946881 1 146628018 146628692 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594903,nssv2594874,nssv2594837,nssv2594881,nssv2594892,nssv2594901,nssv2594884,nssv2594850,nssv2594815,nssv2594847,nssv2594887,nssv2594862,nssv2594845,nssv2594848,nssv2594817,nssv2594836,nssv2594835,nssv2594849,nssv2594844,nssv2594869,nssv2594886,nssv2594873,nssv2594831,nssv2594867,nssv2594821,nssv2594876,nssv2594830,nssv2594894,nssv2594896,nssv2594893,nssv2594824,nssv2594880,nssv2594816,nssv2594855,nssv2594826,nssv2594812,nssv2594890,nssv2594840,nssv2594825,nssv2594858,nssv2594888,nssv2594871,nssv2594889,nssv2594843,nssv2594900,nssv2594861,nssv2594828,nssv2594878,nssv2594899,nssv2594859,nssv2594833,nssv2594851,nssv2594902,nssv2594860,nssv2594885,nssv2594866,nssv2594841,nssv2594852,nssv2594819,nssv2594897,nssv2594823,nssv2594864,nssv2594832,nssv2594879,nssv2594891,nssv2594875,nssv2594814,nssv2594853,nssv2594820,nssv2594868,nssv2594883,nssv2594863,nssv2594895,nssv2594882,nssv2594829,nssv2594854,nssv2594834,nssv2594870,nssv2594842,nssv2594857,nssv2594838,nssv2594898,nssv2594818,nssv2594813,nssv2594827,nssv2594877,nssv2594822,nssv2594865,nssv2594839,nssv2594856,nssv2594872,nssv2594846 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946882 1 146628692 146629445 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594914,nssv2594981,nssv2594936,nssv2594971,nssv2594987,nssv2594939,nssv2594940,nssv2594973,nssv2594991,nssv2594956,nssv2594930,nssv2594968,nssv2594921,nssv2594972,nssv2594947,nssv2594905,nssv2594992,nssv2594959,nssv2594918,nssv2594974,nssv2594908,nssv2594910,nssv2594937,nssv2594985,nssv2594926,nssv2594904,nssv2594934,nssv2594942,nssv2594938,nssv2594913,nssv2594933,nssv2594957,nssv2594911,nssv2594958,nssv2594922,nssv2594909,nssv2594948,nssv2594946,nssv2594989,nssv2594976,nssv2594912,nssv2594978,nssv2594924,nssv2594951,nssv2594995,nssv2594977,nssv2594986,nssv2594966,nssv2594932,nssv2594916,nssv2594941,nssv2594980,nssv2594907,nssv2594969,nssv2594935,nssv2594970,nssv2594945,nssv2594963,nssv2594990,nssv2594984,nssv2594931,nssv2594975,nssv2594919,nssv2594950,nssv2594993,nssv2594952,nssv2594928,nssv2594967,nssv2594929,nssv2594949,nssv2594927,nssv2594979,nssv2594915,nssv2594954,nssv2594988,nssv2594983,nssv2594920,nssv2594961,nssv2594923,nssv2594982,nssv2594917,nssv2594962,nssv2594925,nssv2594965,nssv2594944,nssv2594964,nssv2594994,nssv2594955,nssv2594960,nssv2594906,nssv2594953,nssv2594943 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946883 1 146629445 146629945 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2592950,nssv2595001,nssv2595005,nssv2592952,nssv2592926,nssv2592967,nssv2592927,nssv2592958,nssv2594998,nssv2592976,nssv2592946,nssv2592961,nssv2595010,nssv2592972,nssv2592997,nssv2592966,nssv2592988,nssv2592986,nssv2594999,nssv2592987,nssv2592947,nssv2592965,nssv2592929,nssv2592957,nssv2592934,nssv2592963,nssv2592940,nssv2595007,nssv2592990,nssv2592982,nssv2595009,nssv2592984,nssv2592995,nssv2592974,nssv2592994,nssv2592959,nssv2592930,nssv2592975,nssv2592939,nssv2592964,nssv2592925,nssv2592969,nssv2592991,nssv2592953,nssv2595002,nssv2592956,nssv2595006,nssv2594997,nssv2595012,nssv2592970,nssv2595011,nssv2592951,nssv2592935,nssv2592962,nssv2595013,nssv2592948,nssv2592993,nssv2592945,nssv2592989,nssv2592983,nssv2592933,nssv2592978,nssv2592943,nssv2592973,nssv2592949,nssv2592979,nssv2592996,nssv2592971,nssv2592938,nssv2592941,nssv2595003,nssv2594996,nssv2592992,nssv2592980,nssv2592942,nssv2592977,nssv2592932,nssv2592968,nssv2592936,nssv2592998,nssv2595008,nssv2595004,nssv2592928,nssv2595000,nssv2592937,nssv2592981,nssv2592931,nssv2592954,nssv2592944,nssv2592985,nssv2592960,nssv2592955 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946884 1 146629945 146631233 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593031,nssv2593058,nssv2593017,nssv2593065,nssv2593010,nssv2593040,nssv2593073,nssv2593043,nssv2593028,nssv2593034,nssv2593023,nssv2593052,nssv2593006,nssv2593050,nssv2593008,nssv2593060,nssv2593007,nssv2593046,nssv2593019,nssv2593053,nssv2593074,nssv2593033,nssv2593027,nssv2593045,nssv2593069,nssv2593025,nssv2593070,nssv2593068,nssv2593011,nssv2593029,nssv2593087,nssv2593057,nssv2593005,nssv2593032,nssv2593015,nssv2593051,nssv2593012,nssv2593037,nssv2593021,nssv2593026,nssv2593020,nssv2593056,nssv2593083,nssv2593080,nssv2593000,nssv2593081,nssv2593071,nssv2593062,nssv2593078,nssv2593066,nssv2593090,nssv2593047,nssv2593016,nssv2593048,nssv2593075,nssv2593038,nssv2593002,nssv2593049,nssv2593082,nssv2593063,nssv2593089,nssv2593088,nssv2593072,nssv2593079,nssv2593024,nssv2593061,nssv2593004,nssv2593055,nssv2593013,nssv2593059,nssv2593003,nssv2593022,nssv2593014,nssv2593036,nssv2593077,nssv2593035,nssv2593030,nssv2593085,nssv2593001,nssv2593064,nssv2593009,nssv2593041,nssv2593018,nssv2593067,nssv2593076,nssv2593054,nssv2593086,nssv2593044,nssv2592999,nssv2593039,nssv2593084,nssv2593042 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946885 1 146631233 146631959 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593124,nssv2593135,nssv2593107,nssv2593150,nssv2593110,nssv2593139,nssv2593093,nssv2593119,nssv2593095,nssv2593134,nssv2593169,nssv2593155,nssv2593103,nssv2593149,nssv2593167,nssv2593142,nssv2593164,nssv2593128,nssv2593102,nssv2593147,nssv2593101,nssv2593141,nssv2593098,nssv2593177,nssv2593113,nssv2593138,nssv2593121,nssv2593148,nssv2593099,nssv2593143,nssv2593162,nssv2593126,nssv2593100,nssv2593092,nssv2593179,nssv2593157,nssv2593165,nssv2593172,nssv2593096,nssv2593151,nssv2593120,nssv2593161,nssv2593175,nssv2593130,nssv2593174,nssv2593091,nssv2593168,nssv2593127,nssv2593105,nssv2593156,nssv2593097,nssv2593136,nssv2593178,nssv2593144,nssv2593108,nssv2593131,nssv2593116,nssv2593133,nssv2593117,nssv2593160,nssv2593181,nssv2593173,nssv2593112,nssv2593122,nssv2593182,nssv2593145,nssv2593106,nssv2593146,nssv2593104,nssv2593140,nssv2593109,nssv2593125,nssv2593170,nssv2593132,nssv2593123,nssv2593137,nssv2593163,nssv2593159,nssv2593114,nssv2593115,nssv2593166,nssv2593154,nssv2593171,nssv2593158,nssv2593111,nssv2593152,nssv2593094,nssv2593180,nssv2593153,nssv2593176,nssv2593129,nssv2593118 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946886 1 146631959 146632668 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594115,nssv2594173,nssv2594128,nssv2594160,nssv2594136,nssv2594171,nssv2594126,nssv2594131,nssv2594119,nssv2594158,nssv2594111,nssv2593183,nssv2594190,nssv2594175,nssv2594186,nssv2594162,nssv2594130,nssv2594189,nssv2594187,nssv2594153,nssv2594113,nssv2594135,nssv2594120,nssv2594166,nssv2594112,nssv2594157,nssv2594116,nssv2594164,nssv2594123,nssv2594192,nssv2594179,nssv2594176,nssv2594124,nssv2594146,nssv2594191,nssv2594156,nssv2594197,nssv2594152,nssv2594110,nssv2594168,nssv2594184,nssv2594143,nssv2594185,nssv2594161,nssv2594198,nssv2594172,nssv2594127,nssv2594174,nssv2594194,nssv2594188,nssv2594129,nssv2594163,nssv2594182,nssv2594154,nssv2594183,nssv2594145,nssv2594121,nssv2594169,nssv2594140,nssv2594177,nssv2594114,nssv2594141,nssv2594118,nssv2594167,nssv2594181,nssv2594108,nssv2594117,nssv2594149,nssv2594122,nssv2594150,nssv2594195,nssv2594134,nssv2594137,nssv2594196,nssv2594180,nssv2594155,nssv2594132,nssv2594159,nssv2594178,nssv2594193,nssv2594125,nssv2594165,nssv2594133,nssv2594138,nssv2594109,nssv2594147,nssv2594139,nssv2594148,nssv2594151,nssv2594170,nssv2594144,nssv2594142 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946887 1 146632668 146633342 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594274,nssv2594284,nssv2594224,nssv2594240,nssv2594220,nssv2594248,nssv2594273,nssv2594255,nssv2594270,nssv2594235,nssv2594217,nssv2594249,nssv2594212,nssv2594250,nssv2594282,nssv2594287,nssv2594211,nssv2594225,nssv2594216,nssv2594242,nssv2594210,nssv2594267,nssv2594223,nssv2594254,nssv2594288,nssv2594259,nssv2594230,nssv2594245,nssv2594278,nssv2594265,nssv2594207,nssv2594263,nssv2594272,nssv2594233,nssv2594289,nssv2594243,nssv2594203,nssv2594280,nssv2594206,nssv2594246,nssv2594228,nssv2594247,nssv2594286,nssv2594262,nssv2594205,nssv2594236,nssv2594201,nssv2594229,nssv2594275,nssv2594261,nssv2594277,nssv2594239,nssv2594227,nssv2594251,nssv2594285,nssv2594266,nssv2594269,nssv2594257,nssv2594221,nssv2594237,nssv2594219,nssv2594268,nssv2594209,nssv2594244,nssv2594202,nssv2594241,nssv2594204,nssv2594238,nssv2594208,nssv2594283,nssv2594215,nssv2594264,nssv2594200,nssv2594234,nssv2594271,nssv2594222,nssv2594276,nssv2594226,nssv2594214,nssv2594232,nssv2594218,nssv2594279,nssv2594281,nssv2594260,nssv2594231,nssv2594199,nssv2594213,nssv2594258,nssv2594256,nssv2594252,nssv2594253 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946889 1 146633342 146634090 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594323,nssv2594331,nssv2594302,nssv2594347,nssv2594319,nssv2594327,nssv2594378,nssv2594342,nssv2594304,nssv2594351,nssv2594298,nssv2594357,nssv2594366,nssv2594344,nssv2594370,nssv2594326,nssv2594294,nssv2594343,nssv2594374,nssv2594372,nssv2594365,nssv2594371,nssv2594297,nssv2594360,nssv2594320,nssv2594348,nssv2594322,nssv2594334,nssv2594303,nssv2594321,nssv2594373,nssv2594353,nssv2594301,nssv2594339,nssv2594305,nssv2594338,nssv2594295,nssv2594317,nssv2594308,nssv2594333,nssv2594292,nssv2593872,nssv2594293,nssv2594314,nssv2594299,nssv2594330,nssv2594300,nssv2594346,nssv2594310,nssv2594328,nssv2594309,nssv2594345,nssv2594367,nssv2594375,nssv2594315,nssv2594336,nssv2594364,nssv2594356,nssv2594363,nssv2594324,nssv2594362,nssv2594349,nssv2594361,nssv2594340,nssv2594368,nssv2594379,nssv2594296,nssv2594318,nssv2594380,nssv2594325,nssv2594307,nssv2594337,nssv2594369,nssv2594332,nssv2594377,nssv2594335,nssv2594313,nssv2594329,nssv2594306,nssv2594376,nssv2594312,nssv2594358,nssv2594311,nssv2594341,nssv2594316,nssv2594352,nssv2594359,nssv2594350,nssv2594355,nssv2594354,nssv2594291 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946890 1 146634090 146634590 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593886,nssv2593910,nssv2593893,nssv2593921,nssv2593949,nssv2593915,nssv2593884,nssv2593913,nssv2593880,nssv2593873,nssv2593887,nssv2593897,nssv2593876,nssv2593936,nssv2593950,nssv2593926,nssv2593896,nssv2593925,nssv2593879,nssv2593906,nssv2593878,nssv2593935,nssv2593875,nssv2593943,nssv2593881,nssv2593927,nssv2593902,nssv2593931,nssv2593951,nssv2593920,nssv2593891,nssv2593939,nssv2593946,nssv2593938,nssv2593945,nssv2593941,nssv2593903,nssv2593916,nssv2593895,nssv2593922,nssv2593883,nssv2593930,nssv2593877,nssv2593904,nssv2593882,nssv2593907,nssv2593885,nssv2593934,nssv2593888,nssv2593937,nssv2593899,nssv2593908,nssv2593948,nssv2593942,nssv2593953,nssv2593932,nssv2593892,nssv2593940,nssv2593898,nssv2593901,nssv2593894,nssv2593928,nssv2593889,nssv2593924,nssv2593952,nssv2593923,nssv2593947,nssv2593929,nssv2593890,nssv2593900,nssv2593905,nssv2593919,nssv2593944,nssv2593912,nssv2593918,nssv2593917,nssv2593914,nssv2593909,nssv2593911,nssv2593874,nssv2593933 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946891 1 146634090 146635390 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2593957,nssv2593955,nssv2593963,nssv2593959,nssv2593960,nssv2593964,nssv2593961,nssv2593954,nssv2593956,nssv2593958,nssv2593962 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946892 1 146634590 146635390 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594036,nssv2594004,nssv2594043,nssv2594000,nssv2594042,nssv2594013,nssv2593984,nssv2593991,nssv2593971,nssv2594009,nssv2594044,nssv2594045,nssv2593976,nssv2594030,nssv2593994,nssv2594008,nssv2594041,nssv2594025,nssv2593997,nssv2594023,nssv2593993,nssv2594007,nssv2593969,nssv2594001,nssv2593983,nssv2593988,nssv2593974,nssv2593998,nssv2593979,nssv2594003,nssv2593981,nssv2594002,nssv2593967,nssv2594016,nssv2593987,nssv2594017,nssv2594039,nssv2594020,nssv2593966,nssv2594015,nssv2593982,nssv2594021,nssv2593977,nssv2594005,nssv2593973,nssv2594024,nssv2593980,nssv2594019,nssv2594040,nssv2594032,nssv2593990,nssv2593992,nssv2593978,nssv2594031,nssv2593975,nssv2593999,nssv2593996,nssv2594022,nssv2594037,nssv2594026,nssv2594038,nssv2594034,nssv2594035,nssv2593965,nssv2593972,nssv2594006,nssv2593985,nssv2594010,nssv2593986,nssv2594029,nssv2593989,nssv2594012,nssv2593968,nssv2593995,nssv2593970,nssv2594018,nssv2594033,nssv2594011,nssv2594028,nssv2594027,nssv2594014 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946893 1 146635390 146635890 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595498,nssv2594105,nssv2594064,nssv2594093,nssv2595495,nssv2594101,nssv2594078,nssv2594086,nssv2594061,nssv2595496,nssv2595486,nssv2594104,nssv2595497,nssv2595488,nssv2595479,nssv2594096,nssv2594059,nssv2594069,nssv2595481,nssv2594072,nssv2594054,nssv2594095,nssv2594049,nssv2595492,nssv2594048,nssv2594102,nssv2595487,nssv2595474,nssv2594057,nssv2594092,nssv2594052,nssv2594090,nssv2594050,nssv2594046,nssv2594075,nssv2595472,nssv2595484,nssv2594085,nssv2595494,nssv2594107,nssv2595491,nssv2594099,nssv2594056,nssv2595493,nssv2594070,nssv2595475,nssv2594055,nssv2595470,nssv2595480,nssv2594098,nssv2594051,nssv2594087,nssv2594077,nssv2594083,nssv2594053,nssv2594081,nssv2595482,nssv2594084,nssv2594065,nssv2594082,nssv2595490,nssv2595489,nssv2594066,nssv2594106,nssv2594063,nssv2594097,nssv2594062,nssv2594073,nssv2594067,nssv2594076,nssv2594047,nssv2595473,nssv2595483,nssv2595476,nssv2595485,nssv2594080,nssv2594074,nssv2594088,nssv2594068,nssv2594094,nssv2595478,nssv2594091,nssv2594071,nssv2594079,nssv2594058,nssv2594100,nssv2594060,nssv2594089,nssv2594103,nssv2595471,nssv2595477 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946895 1 146635890 146636616 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595503,nssv2595564,nssv2595525,nssv2595580,nssv2595581,nssv2595571,nssv2595519,nssv2595551,nssv2595532,nssv2595555,nssv2595515,nssv2595549,nssv2595522,nssv2595575,nssv2595585,nssv2595561,nssv2595502,nssv2595537,nssv2595533,nssv2595566,nssv2595524,nssv2595511,nssv2595506,nssv2595534,nssv2595589,nssv2595508,nssv2595539,nssv2595576,nssv2595523,nssv2595579,nssv2595542,nssv2595577,nssv2595509,nssv2595544,nssv2595582,nssv2595557,nssv2595513,nssv2595505,nssv2595510,nssv2595550,nssv2595587,nssv2595538,nssv2595521,nssv2595548,nssv2595543,nssv2595552,nssv2595535,nssv2595572,nssv2595518,nssv2595573,nssv2595516,nssv2595578,nssv2595584,nssv2595546,nssv2595588,nssv2595553,nssv2595514,nssv2595562,nssv2595530,nssv2595559,nssv2595583,nssv2595547,nssv2595520,nssv2595574,nssv2595512,nssv2595565,nssv2595529,nssv2595569,nssv2595528,nssv2595504,nssv2595586,nssv2595545,nssv2595526,nssv2595556,nssv2595536,nssv2595554,nssv2595507,nssv2595567,nssv2595531,nssv2595500,nssv2595527,nssv2595501,nssv2595517,nssv2595563,nssv2595590,nssv2595541,nssv2595540,nssv2595570,nssv2595558,nssv2595560,nssv2595568 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv13n82 1 146636616 146639230 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946896,nsv946897 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946898 1 146638730 146639230 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595692,nssv2595687,nssv2595689,nssv2595691,nssv2595690,nssv2595688,nssv2595686,nssv2595684,nssv2595693,nssv2595683,nssv2595685,nssv2595694 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946899 1 146639230 146639901 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594632,nssv2595763,nssv2595716,nssv2595722,nssv2594615,nssv2595764,nssv2595696,nssv2595759,nssv2594618,nssv2595746,nssv2595715,nssv2595734,nssv2594626,nssv2595760,nssv2594619,nssv2595751,nssv2595714,nssv2595736,nssv2594616,nssv2595718,nssv2595717,nssv2595695,nssv2595707,nssv2595731,nssv2595706,nssv2594628,nssv2595704,nssv2595745,nssv2595699,nssv2595721,nssv2594617,nssv2595738,nssv2595766,nssv2595737,nssv2595705,nssv2595754,nssv2594622,nssv2595755,nssv2595698,nssv2594627,nssv2595765,nssv2594624,nssv2595697,nssv2595740,nssv2594630,nssv2595752,nssv2595727,nssv2595749,nssv2595720,nssv2595757,nssv2595702,nssv2595744,nssv2595703,nssv2595762,nssv2595710,nssv2595742,nssv2595723,nssv2595729,nssv2595719,nssv2595728,nssv2595711,nssv2595758,nssv2595709,nssv2595741,nssv2595712,nssv2595743,nssv2595724,nssv2595739,nssv2594621,nssv2595730,nssv2594629,nssv2595733,nssv2594633,nssv2595748,nssv2595700,nssv2595747,nssv2595701,nssv2594623,nssv2595726,nssv2595725,nssv2595708,nssv2595732,nssv2594625,nssv2595756,nssv2595713,nssv2595753,nssv2594620,nssv2595750,nssv2595761,nssv2595735,nssv2594631 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946901 1 146639901 146641124 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2594637,nssv2594692,nssv2594661,nssv2594702,nssv2594638,nssv2594681,nssv2594675,nssv2594710,nssv2594645,nssv2594689,nssv2594648,nssv2594709,nssv2594666,nssv2594691,nssv2594667,nssv2594672,nssv2594649,nssv2594690,nssv2594651,nssv2594682,nssv2594664,nssv2594697,nssv2594663,nssv2594669,nssv2594665,nssv2594698,nssv2594654,nssv2594706,nssv2594647,nssv2594701,nssv2594717,nssv2594713,nssv2594722,nssv2594688,nssv2595767,nssv2594704,nssv2594718,nssv2594684,nssv2594656,nssv2594712,nssv2594670,nssv2594676,nssv2594644,nssv2594714,nssv2594668,nssv2594705,nssv2594657,nssv2594635,nssv2594641,nssv2594646,nssv2594642,nssv2594640,nssv2594721,nssv2594708,nssv2594662,nssv2594703,nssv2594719,nssv2594693,nssv2594671,nssv2594694,nssv2594716,nssv2594636,nssv2594720,nssv2594639,nssv2594660,nssv2594683,nssv2594674,nssv2594707,nssv2594678,nssv2594680,nssv2594652,nssv2594699,nssv2594653,nssv2594679,nssv2594659,nssv2594685,nssv2594677,nssv2594687,nssv2594658,nssv2594686,nssv2594655,nssv2594715,nssv2594723,nssv2594673,nssv2595768,nssv2594695,nssv2594650,nssv2594711,nssv2594643,nssv2594700,nssv2594696 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946902 1 146641124 146641873 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595777,nssv2595771,nssv2595780,nssv2595778,nssv2595773,nssv2595775,nssv2595776,nssv2595769,nssv2595779,nssv2595774,nssv2595772,nssv2595770 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946903 1 146641124 146642467 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595792,nssv2595831,nssv2595813,nssv2595825,nssv2595784,nssv2595781,nssv2595860,nssv2595846,nssv2595783,nssv2595832,nssv2595854,nssv2595833,nssv2595802,nssv2595817,nssv2595855,nssv2595822,nssv2595789,nssv2595844,nssv2595791,nssv2595838,nssv2595800,nssv2595848,nssv2595794,nssv2595804,nssv2595796,nssv2595815,nssv2595853,nssv2595811,nssv2595795,nssv2595843,nssv2595793,nssv2595841,nssv2595782,nssv2595847,nssv2595785,nssv2595814,nssv2595790,nssv2595842,nssv2595799,nssv2595839,nssv2595852,nssv2595827,nssv2595806,nssv2595816,nssv2595788,nssv2595829,nssv2595797,nssv2595826,nssv2595803,nssv2595823,nssv2595805,nssv2595818,nssv2595856,nssv2595845,nssv2595787,nssv2595850,nssv2595851,nssv2595820,nssv2595801,nssv2595808,nssv2595859,nssv2595840,nssv2595810,nssv2595834,nssv2595858,nssv2595837,nssv2595809,nssv2595836,nssv2595812,nssv2595849,nssv2595857,nssv2595835,nssv2595798,nssv2595830,nssv2595786,nssv2595821,nssv2595807,nssv2595819,nssv2595824,nssv2595828 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946904 1 146641873 146642467 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595868,nssv2595866,nssv2595871,nssv2595869,nssv2595864,nssv2595862,nssv2595870,nssv2595861,nssv2595867,nssv2595865,nssv2595863,nssv2595872 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946905 1 146642467 146643124 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595950,nssv2595935,nssv2595879,nssv2595932,nssv2595963,nssv2595917,nssv2595891,nssv2595915,nssv2595901,nssv2595964,nssv2595946,nssv2595926,nssv2595875,nssv2595929,nssv2595902,nssv2595914,nssv2595878,nssv2595941,nssv2595876,nssv2595913,nssv2595895,nssv2595903,nssv2595898,nssv2595900,nssv2595945,nssv2595911,nssv2595955,nssv2595934,nssv2595956,nssv2595931,nssv2595894,nssv2595933,nssv2595959,nssv2595912,nssv2595952,nssv2595923,nssv2595892,nssv2595906,nssv2595890,nssv2595896,nssv2595905,nssv2595938,nssv2595881,nssv2595907,nssv2595962,nssv2595953,nssv2595874,nssv2595939,nssv2595883,nssv2595954,nssv2595960,nssv2595873,nssv2595884,nssv2595916,nssv2595882,nssv2595958,nssv2595893,nssv2595928,nssv2595949,nssv2595961,nssv2595880,nssv2595899,nssv2595885,nssv2595942,nssv2595951,nssv2595921,nssv2595889,nssv2595927,nssv2595904,nssv2595908,nssv2595887,nssv2595940,nssv2595877,nssv2595922,nssv2595888,nssv2595909,nssv2595944,nssv2595910,nssv2595948,nssv2595930,nssv2595886,nssv2595919,nssv2595947,nssv2595924,nssv2595897,nssv2595925,nssv2595943,nssv2595957,nssv2595920,nssv2595937,nssv2595936,nssv2595918 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946906 1 146643124 146643872 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595974,nssv2595969,nssv2595972,nssv2595965,nssv2595968,nssv2595973,nssv2595975,nssv2595976,nssv2595971,nssv2595970,nssv2595967,nssv2595966 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946907 1 146643124 146644541 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595999,nssv2596033,nssv2595997,nssv2596019,nssv2595994,nssv2596043,nssv2595987,nssv2596018,nssv2596001,nssv2596020,nssv2595983,nssv2596028,nssv2596056,nssv2596021,nssv2595998,nssv2596003,nssv2595979,nssv2596040,nssv2595982,nssv2595977,nssv2595978,nssv2596029,nssv2596054,nssv2596045,nssv2596006,nssv2596042,nssv2596050,nssv2596015,nssv2595991,nssv2596046,nssv2595990,nssv2596039,nssv2595989,nssv2596022,nssv2596053,nssv2596026,nssv2596005,nssv2596000,nssv2596055,nssv2596016,nssv2596052,nssv2596027,nssv2595986,nssv2596032,nssv2595995,nssv2596010,nssv2596008,nssv2596035,nssv2595993,nssv2596041,nssv2595996,nssv2596023,nssv2596009,nssv2596017,nssv2595985,nssv2596007,nssv2596002,nssv2596030,nssv2596047,nssv2596004,nssv2595980,nssv2596011,nssv2595988,nssv2596037,nssv2595992,nssv2596014,nssv2595981,nssv2596013,nssv2596048,nssv2596012,nssv2596051,nssv2596031,nssv2595984,nssv2596024,nssv2596049,nssv2596034,nssv2596036,nssv2596044,nssv2596038,nssv2596025 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946908 1 146643872 146644541 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596066,nssv2596057,nssv2596060,nssv2596065,nssv2596064,nssv2596062,nssv2596059,nssv2596061,nssv2596067,nssv2596068,nssv2596063,nssv2596058 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946909 1 146644541 146645666 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596447,nssv2596404,nssv2596459,nssv2596442,nssv2596463,nssv2596423,nssv2596071,nssv2596432,nssv2596393,nssv2596424,nssv2596387,nssv2596422,nssv2596452,nssv2596443,nssv2596454,nssv2596414,nssv2596398,nssv2596416,nssv2596456,nssv2596425,nssv2596394,nssv2596444,nssv2596405,nssv2596462,nssv2596391,nssv2596426,nssv2596072,nssv2596445,nssv2596451,nssv2596468,nssv2596453,nssv2596440,nssv2596386,nssv2596436,nssv2596464,nssv2596421,nssv2596383,nssv2596457,nssv2596385,nssv2596428,nssv2596466,nssv2596429,nssv2596409,nssv2596418,nssv2596073,nssv2596458,nssv2596399,nssv2596427,nssv2596074,nssv2596433,nssv2596401,nssv2596431,nssv2596448,nssv2596420,nssv2596450,nssv2596403,nssv2596460,nssv2596412,nssv2596396,nssv2596435,nssv2596070,nssv2596446,nssv2596395,nssv2596415,nssv2596389,nssv2596430,nssv2596467,nssv2596441,nssv2596397,nssv2596437,nssv2596406,nssv2596413,nssv2596402,nssv2596410,nssv2596408,nssv2596400,nssv2596392,nssv2596419,nssv2596449,nssv2596465,nssv2596390,nssv2596439,nssv2596455,nssv2596461,nssv2596388,nssv2596411,nssv2596384,nssv2596069,nssv2596407,nssv2596434,nssv2596417,nssv2596438 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946910 1 146645666 146647819 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596106,nssv2596079,nssv2596491,nssv2595018,nssv2596487,nssv2596507,nssv2596490,nssv2596469,nssv2596090,nssv2596100,nssv2596482,nssv2596496,nssv2596475,nssv2596085,nssv2596494,nssv2596492,nssv2596481,nssv2596082,nssv2596095,nssv2596084,nssv2596091,nssv2596077,nssv2596486,nssv2596502,nssv2596485,nssv2595023,nssv2596471,nssv2596087,nssv2596476,nssv2595014,nssv2596500,nssv2596078,nssv2596478,nssv2595028,nssv2596097,nssv2595015,nssv2596093,nssv2595029,nssv2596473,nssv2595031,nssv2596480,nssv2596103,nssv2596470,nssv2595027,nssv2596477,nssv2595022,nssv2596472,nssv2595019,nssv2596102,nssv2595021,nssv2596094,nssv2596107,nssv2596501,nssv2596505,nssv2596088,nssv2596099,nssv2596488,nssv2595024,nssv2596105,nssv2596504,nssv2596493,nssv2596083,nssv2596092,nssv2595017,nssv2596497,nssv2596495,nssv2596484,nssv2595026,nssv2596498,nssv2595030,nssv2596108,nssv2596104,nssv2596479,nssv2596080,nssv2596101,nssv2596076,nssv2596089,nssv2596081,nssv2596483,nssv2596075,nssv2596096,nssv2596098,nssv2596489,nssv2595016,nssv2596474,nssv2596086,nssv2596109,nssv2595020,nssv2596499,nssv2595025,nssv2596503,nssv2596506 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv212e59 1 146646552 146649150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3361222,esv3440724 M 185 2 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19239,NA19240 nsv946911 1 146647819 146649042 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596113,nssv2596156,nssv2596123,nssv2596137,nssv2596121,nssv2596169,nssv2596199,nssv2596110,nssv2596184,nssv2596177,nssv2596132,nssv2596179,nssv2596131,nssv2596140,nssv2596193,nssv2596201,nssv2596188,nssv2596190,nssv2596127,nssv2596151,nssv2596116,nssv2596170,nssv2596192,nssv2596155,nssv2596115,nssv2596171,nssv2596130,nssv2596149,nssv2596187,nssv2596165,nssv2596183,nssv2596152,nssv2596189,nssv2596145,nssv2596200,nssv2596175,nssv2596119,nssv2596154,nssv2596129,nssv2596144,nssv2596120,nssv2596166,nssv2596135,nssv2596136,nssv2596126,nssv2596172,nssv2596138,nssv2596162,nssv2596142,nssv2596176,nssv2596186,nssv2596159,nssv2596141,nssv2596158,nssv2596112,nssv2596195,nssv2596122,nssv2596153,nssv2596197,nssv2596133,nssv2596180,nssv2596173,nssv2596124,nssv2596191,nssv2596139,nssv2596163,nssv2596128,nssv2596150,nssv2596185,nssv2596148,nssv2596111,nssv2596168,nssv2596118,nssv2596198,nssv2596182,nssv2596178,nssv2596134,nssv2596194,nssv2596114,nssv2596157,nssv2596125,nssv2596167,nssv2596181,nssv2596147,nssv2596196,nssv2596146,nssv2596117,nssv2596164,nssv2596160,nssv2596143,nssv2596174,nssv2596161 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946912 1 146649042 146650428 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596210,nssv2596202,nssv2596213,nssv2596244,nssv2596204,nssv2596232,nssv2596276,nssv2596291,nssv2596290,nssv2596248,nssv2596285,nssv2596238,nssv2596206,nssv2596283,nssv2596219,nssv2596269,nssv2596217,nssv2596229,nssv2596209,nssv2596245,nssv2596231,nssv2596246,nssv2596214,nssv2596282,nssv2596207,nssv2596250,nssv2596212,nssv2596237,nssv2596275,nssv2596251,nssv2596205,nssv2596249,nssv2596216,nssv2596262,nssv2596203,nssv2596270,nssv2596227,nssv2596228,nssv2596293,nssv2596253,nssv2596222,nssv2596235,nssv2596272,nssv2596254,nssv2596292,nssv2596242,nssv2596218,nssv2596236,nssv2596273,nssv2596241,nssv2596286,nssv2596288,nssv2596223,nssv2596243,nssv2596280,nssv2596255,nssv2596221,nssv2596260,nssv2596289,nssv2596240,nssv2596233,nssv2596263,nssv2596208,nssv2596261,nssv2596215,nssv2596271,nssv2596211,nssv2596258,nssv2596230,nssv2596284,nssv2596279,nssv2596266,nssv2596234,nssv2596252,nssv2596281,nssv2596247,nssv2596220,nssv2596264,nssv2596274,nssv2596265,nssv2596277,nssv2596225,nssv2596278,nssv2596287,nssv2596226,nssv2596268,nssv2596224,nssv2596256,nssv2596239,nssv2596267,nssv2596257,nssv2596259 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv213e59 1 146649752 146652350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3366352,esv3345068 M 185 2 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19239,NA19240 nsv946913 1 146650428 146651097 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596305,nssv2596342,nssv2596326,nssv2596375,nssv2596300,nssv2596358,nssv2596301,nssv2596327,nssv2596370,nssv2596363,nssv2596323,nssv2596353,nssv2596319,nssv2596355,nssv2596302,nssv2596374,nssv2596368,nssv2596335,nssv2596373,nssv2596330,nssv2596311,nssv2596352,nssv2596364,nssv2596378,nssv2596309,nssv2596331,nssv2596312,nssv2596362,nssv2596325,nssv2596357,nssv2596298,nssv2596334,nssv2596304,nssv2596343,nssv2596308,nssv2596329,nssv2596376,nssv2596510,nssv2596303,nssv2596340,nssv2596299,nssv2596328,nssv2596306,nssv2596339,nssv2596316,nssv2596344,nssv2596367,nssv2596347,nssv2596377,nssv2596351,nssv2596365,nssv2596333,nssv2596318,nssv2596324,nssv2596314,nssv2596332,nssv2596381,nssv2596294,nssv2596369,nssv2596337,nssv2596380,nssv2596317,nssv2596313,nssv2596379,nssv2596508,nssv2596336,nssv2596296,nssv2596321,nssv2596307,nssv2596361,nssv2596371,nssv2596345,nssv2596310,nssv2596346,nssv2596322,nssv2596350,nssv2596366,nssv2596341,nssv2596372,nssv2596359,nssv2596297,nssv2596356,nssv2596509,nssv2596320,nssv2596315,nssv2596360,nssv2596295,nssv2596354,nssv2596348,nssv2596338,nssv2596382,nssv2596349 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946914 1 146651097 146651722 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596546,nssv2596564,nssv2596531,nssv2596516,nssv2596599,nssv2596588,nssv2596535,nssv2596512,nssv2596540,nssv2596577,nssv2596544,nssv2596556,nssv2596547,nssv2596522,nssv2596543,nssv2596572,nssv2596551,nssv2596587,nssv2596592,nssv2596591,nssv2596533,nssv2596548,nssv2596601,nssv2596560,nssv2596524,nssv2596561,nssv2596539,nssv2596511,nssv2596534,nssv2596563,nssv2596525,nssv2596578,nssv2596528,nssv2596581,nssv2596518,nssv2596584,nssv2596553,nssv2596570,nssv2596596,nssv2596569,nssv2596538,nssv2596602,nssv2596600,nssv2596585,nssv2596514,nssv2596557,nssv2596594,nssv2596566,nssv2596526,nssv2596589,nssv2596527,nssv2596562,nssv2596532,nssv2596574,nssv2596598,nssv2596567,nssv2596517,nssv2596558,nssv2596529,nssv2596583,nssv2596595,nssv2596519,nssv2596530,nssv2596555,nssv2596593,nssv2596549,nssv2596523,nssv2596573,nssv2596550,nssv2596590,nssv2596541,nssv2596565,nssv2596537,nssv2596582,nssv2596513,nssv2596575,nssv2596554,nssv2596568,nssv2596521,nssv2596552,nssv2596536,nssv2596579,nssv2596597,nssv2596586,nssv2596542,nssv2596559,nssv2596520,nssv2596571,nssv2596576,nssv2596515,nssv2596545,nssv2596580 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946915 1 146651722 146652458 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596613,nssv2596675,nssv2596646,nssv2596673,nssv2596643,nssv2596653,nssv2596633,nssv2596681,nssv2596621,nssv2596651,nssv2596623,nssv2596660,nssv2596629,nssv2596664,nssv2596642,nssv2596669,nssv2596692,nssv2596649,nssv2596693,nssv2596659,nssv2596625,nssv2596694,nssv2596618,nssv2596648,nssv2596689,nssv2596637,nssv2596609,nssv2596611,nssv2596631,nssv2596680,nssv2596635,nssv2596677,nssv2596624,nssv2596678,nssv2596686,nssv2596603,nssv2596632,nssv2596666,nssv2596685,nssv2596604,nssv2596684,nssv2596670,nssv2596691,nssv2596641,nssv2596634,nssv2596665,nssv2596619,nssv2596614,nssv2596688,nssv2596662,nssv2596620,nssv2596644,nssv2596626,nssv2596658,nssv2596638,nssv2596655,nssv2596605,nssv2596656,nssv2596610,nssv2596674,nssv2596636,nssv2596679,nssv2596622,nssv2596607,nssv2596630,nssv2596608,nssv2596645,nssv2596667,nssv2596687,nssv2596676,nssv2596606,nssv2596682,nssv2596627,nssv2596671,nssv2596639,nssv2596640,nssv2596617,nssv2596647,nssv2596615,nssv2596683,nssv2596616,nssv2596652,nssv2596628,nssv2596661,nssv2596612,nssv2596672,nssv2596690,nssv2596654,nssv2596663,nssv2596657,nssv2596650,nssv2596668 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946916 1 146652458 146653706 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596711,nssv2594401,nssv2594389,nssv2595061,nssv2596703,nssv2595036,nssv2594391,nssv2594406,nssv2596710,nssv2595064,nssv2595058,nssv2595042,nssv2595047,nssv2594402,nssv2594382,nssv2595033,nssv2596701,nssv2594405,nssv2595063,nssv2595034,nssv2595050,nssv2594396,nssv2595066,nssv2594410,nssv2596696,nssv2594407,nssv2595055,nssv2595044,nssv2594392,nssv2595032,nssv2594385,nssv2594390,nssv2595052,nssv2594400,nssv2595048,nssv2594398,nssv2595062,nssv2594397,nssv2596712,nssv2594412,nssv2595046,nssv2595067,nssv2596715,nssv2595060,nssv2596708,nssv2596695,nssv2596698,nssv2595041,nssv2596706,nssv2595057,nssv2595059,nssv2594415,nssv2596697,nssv2595035,nssv2596702,nssv2595056,nssv2596713,nssv2595038,nssv2595049,nssv2594408,nssv2595051,nssv2594395,nssv2596705,nssv2594413,nssv2596700,nssv2595039,nssv2594381,nssv2594411,nssv2596704,nssv2594403,nssv2596699,nssv2594409,nssv2596714,nssv2594386,nssv2595065,nssv2594383,nssv2596707,nssv2595043,nssv2594384,nssv2595045,nssv2595054,nssv2594414,nssv2595053,nssv2594393,nssv2596709,nssv2595040,nssv2594388,nssv2594404,nssv2594387,nssv2595037,nssv2594394,nssv2594399 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3339988 1 146653352 146671950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691965 M 185 1 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19239 nsv946917 1 146653706 146654375 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595154,nssv2595117,nssv2595096,nssv2595076,nssv2595093,nssv2595129,nssv2595086,nssv2595140,nssv2595081,nssv2595130,nssv2595088,nssv2595136,nssv2595075,nssv2595148,nssv2595104,nssv2595142,nssv2595150,nssv2595146,nssv2595078,nssv2595106,nssv2595152,nssv2595073,nssv2595112,nssv2595110,nssv2595151,nssv2595125,nssv2595158,nssv2595126,nssv2595101,nssv2595121,nssv2595077,nssv2595127,nssv2595156,nssv2595144,nssv2595074,nssv2595131,nssv2595092,nssv2595080,nssv2595071,nssv2595072,nssv2595159,nssv2595124,nssv2595155,nssv2595128,nssv2595082,nssv2595141,nssv2595084,nssv2595103,nssv2595091,nssv2595137,nssv2595085,nssv2595116,nssv2595157,nssv2595120,nssv2595089,nssv2595068,nssv2595111,nssv2595122,nssv2595098,nssv2595107,nssv2595102,nssv2595134,nssv2595108,nssv2595138,nssv2595105,nssv2595079,nssv2595109,nssv2595132,nssv2595099,nssv2595123,nssv2595083,nssv2595115,nssv2595095,nssv2595118,nssv2595100,nssv2595149,nssv2595153,nssv2595119,nssv2595097,nssv2595143,nssv2595090,nssv2595145,nssv2595087,nssv2595135,nssv2595070,nssv2595139,nssv2595094,nssv2595113,nssv2595069,nssv2595114,nssv2595147,nssv2595133 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3362784 1 146653952 146694850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691966 M 185 1 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19240 nsv946918 1 146654375 146655726 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595247,nssv2595230,nssv2595181,nssv2595201,nssv2595172,nssv2595249,nssv2595185,nssv2595205,nssv2595192,nssv2595222,nssv2595177,nssv2595219,nssv2595180,nssv2595195,nssv2595182,nssv2595206,nssv2595232,nssv2595227,nssv2595233,nssv2595200,nssv2595175,nssv2595187,nssv2595167,nssv2595217,nssv2595178,nssv2595202,nssv2595176,nssv2595226,nssv2595239,nssv2595220,nssv2595168,nssv2595211,nssv2595186,nssv2595212,nssv2595173,nssv2595221,nssv2595170,nssv2595188,nssv2595238,nssv2595161,nssv2595248,nssv2595246,nssv2595165,nssv2595210,nssv2595251,nssv2595160,nssv2595169,nssv2595214,nssv2595166,nssv2595213,nssv2595234,nssv2595229,nssv2595162,nssv2595204,nssv2595174,nssv2595197,nssv2595244,nssv2595245,nssv2595179,nssv2595184,nssv2595237,nssv2595223,nssv2595236,nssv2595241,nssv2595250,nssv2595242,nssv2595183,nssv2595191,nssv2595171,nssv2595208,nssv2595193,nssv2595225,nssv2595235,nssv2595216,nssv2595243,nssv2595196,nssv2595240,nssv2595215,nssv2595231,nssv2595198,nssv2595190,nssv2595207,nssv2595163,nssv2595203,nssv2595164,nssv2595228,nssv2595189,nssv2595218,nssv2595209,nssv2595194,nssv2595224,nssv2595199 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946919 1 146655726 146656341 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595342,nssv2595290,nssv2595266,nssv2595283,nssv2595327,nssv2595298,nssv2595329,nssv2595318,nssv2595271,nssv2595321,nssv2595262,nssv2595315,nssv2595325,nssv2595286,nssv2595259,nssv2595307,nssv2595255,nssv2595312,nssv2595264,nssv2595333,nssv2595277,nssv2595253,nssv2595265,nssv2595311,nssv2595272,nssv2595276,nssv2595256,nssv2595289,nssv2595335,nssv2595279,nssv2595278,nssv2595337,nssv2595343,nssv2595280,nssv2595261,nssv2595316,nssv2595323,nssv2595300,nssv2595336,nssv2595303,nssv2595254,nssv2595313,nssv2595339,nssv2595319,nssv2595263,nssv2595338,nssv2595270,nssv2595293,nssv2595281,nssv2595304,nssv2595274,nssv2595291,nssv2595331,nssv2595295,nssv2595326,nssv2595252,nssv2595269,nssv2595308,nssv2595267,nssv2595334,nssv2595258,nssv2595297,nssv2595330,nssv2595305,nssv2595328,nssv2595288,nssv2595260,nssv2595306,nssv2595285,nssv2595309,nssv2595268,nssv2595301,nssv2595332,nssv2595317,nssv2595324,nssv2595314,nssv2595257,nssv2595310,nssv2595284,nssv2595299,nssv2595273,nssv2595294,nssv2595282,nssv2595292,nssv2595340,nssv2595341,nssv2595275,nssv2595322,nssv2595296,nssv2595320,nssv2595287,nssv2595302 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946920 1 146656341 146656935 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2595348,nssv2595396,nssv2595422,nssv2595371,nssv2595358,nssv2595407,nssv2595351,nssv2595399,nssv2595372,nssv2595394,nssv2595349,nssv2595377,nssv2595420,nssv2595393,nssv2595362,nssv2595374,nssv2595355,nssv2595403,nssv2595366,nssv2595406,nssv2595375,nssv2595424,nssv2595368,nssv2595381,nssv2595416,nssv2595408,nssv2595430,nssv2595405,nssv2595418,nssv2595398,nssv2595360,nssv2595391,nssv2595363,nssv2595370,nssv2595373,nssv2595378,nssv2595369,nssv2595367,nssv2595421,nssv2595390,nssv2595356,nssv2595383,nssv2595419,nssv2595404,nssv2595423,nssv2595411,nssv2595433,nssv2595384,nssv2595357,nssv2595382,nssv2595427,nssv2595429,nssv2595364,nssv2595385,nssv2595431,nssv2595410,nssv2595361,nssv2595344,nssv2595434,nssv2595388,nssv2595353,nssv2595425,nssv2595347,nssv2595379,nssv2595365,nssv2595428,nssv2595376,nssv2595401,nssv2595417,nssv2595387,nssv2595352,nssv2595400,nssv2595426,nssv2595432,nssv2595359,nssv2595395,nssv2595415,nssv2595435,nssv2595345,nssv2595380,nssv2595354,nssv2595409,nssv2595414,nssv2595397,nssv2595346,nssv2595392,nssv2595350,nssv2595412,nssv2595386,nssv2595389,nssv2595402,nssv2595413 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946921 1 146656935 146657857 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597389,nssv2597348,nssv2595465,nssv2597359,nssv2595468,nssv2597383,nssv2595439,nssv2595469,nssv2597371,nssv2597351,nssv2595464,nssv2597387,nssv2595440,nssv2595459,nssv2595448,nssv2597361,nssv2597369,nssv2597333,nssv2597388,nssv2597336,nssv2595438,nssv2597356,nssv2595451,nssv2597367,nssv2595447,nssv2597365,nssv2597385,nssv2595466,nssv2595458,nssv2597362,nssv2597375,nssv2597354,nssv2595437,nssv2597341,nssv2595457,nssv2595463,nssv2595441,nssv2597378,nssv2595460,nssv2597366,nssv2595467,nssv2597360,nssv2595446,nssv2597346,nssv2597372,nssv2597340,nssv2595456,nssv2597357,nssv2595461,nssv2597379,nssv2597376,nssv2597355,nssv2595453,nssv2597380,nssv2595454,nssv2597347,nssv2595455,nssv2597337,nssv2595442,nssv2597332,nssv2595444,nssv2597352,nssv2595449,nssv2595436,nssv2597368,nssv2597350,nssv2597374,nssv2597358,nssv2595452,nssv2597344,nssv2597382,nssv2597338,nssv2595443,nssv2597343,nssv2595450,nssv2597335,nssv2597373,nssv2597342,nssv2595445,nssv2597384,nssv2597377,nssv2597339,nssv2597386,nssv2597349,nssv2597370,nssv2597334,nssv2597381,nssv2595462,nssv2597364,nssv2597353,nssv2597363,nssv2597345 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946922 1 146657857 146659026 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597422,nssv2597428,nssv2597481,nssv2597453,nssv2597394,nssv2597425,nssv2597466,nssv2597427,nssv2597412,nssv2597426,nssv2597400,nssv2597437,nssv2597392,nssv2597439,nssv2597414,nssv2597431,nssv2597408,nssv2597456,nssv2597477,nssv2597429,nssv2597401,nssv2597458,nssv2597465,nssv2597435,nssv2597395,nssv2597450,nssv2597399,nssv2597447,nssv2597473,nssv2597440,nssv2597469,nssv2597452,nssv2597480,nssv2597454,nssv2597421,nssv2597413,nssv2597410,nssv2597457,nssv2597391,nssv2597436,nssv2597463,nssv2597446,nssv2597393,nssv2597445,nssv2597468,nssv2597417,nssv2597415,nssv2597459,nssv2597402,nssv2597470,nssv2597462,nssv2597479,nssv2597398,nssv2597471,nssv2597478,nssv2597432,nssv2597460,nssv2597420,nssv2597464,nssv2597455,nssv2597461,nssv2597434,nssv2597406,nssv2597433,nssv2597474,nssv2597390,nssv2597405,nssv2597444,nssv2597403,nssv2597416,nssv2597418,nssv2597472,nssv2597404,nssv2597441,nssv2597407,nssv2597438,nssv2597467,nssv2597476,nssv2597411,nssv2597448,nssv2597409,nssv2597449,nssv2597397,nssv2597423,nssv2597419,nssv2597451,nssv2597396,nssv2597442,nssv2597443,nssv2597475,nssv2597430,nssv2597424 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946923 1 146659026 146660249 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597514,nssv2597531,nssv2597566,nssv2597533,nssv2597569,nssv2597509,nssv2597553,nssv2597520,nssv2597513,nssv2597548,nssv2597486,nssv2597562,nssv2597552,nssv2597482,nssv2597511,nssv2597543,nssv2597489,nssv2597522,nssv2597573,nssv2597546,nssv2597565,nssv2597518,nssv2597495,nssv2597505,nssv2597484,nssv2597523,nssv2597494,nssv2597544,nssv2597502,nssv2597547,nssv2597572,nssv2597521,nssv2597504,nssv2597517,nssv2597507,nssv2597524,nssv2597501,nssv2597550,nssv2597493,nssv2597549,nssv2597492,nssv2597571,nssv2597488,nssv2597535,nssv2597554,nssv2597563,nssv2597490,nssv2597530,nssv2597555,nssv2597516,nssv2597483,nssv2597567,nssv2597559,nssv2597512,nssv2597561,nssv2597519,nssv2597570,nssv2597536,nssv2597491,nssv2597539,nssv2597500,nssv2597538,nssv2597560,nssv2597551,nssv2597496,nssv2597568,nssv2597498,nssv2597541,nssv2597499,nssv2597537,nssv2597556,nssv2597545,nssv2597485,nssv2597564,nssv2597557,nssv2597528,nssv2597503,nssv2597515,nssv2597558,nssv2597508,nssv2597510,nssv2597527,nssv2597487,nssv2597542,nssv2597497,nssv2597540,nssv2597506,nssv2597525,nssv2597526,nssv2597532,nssv2597529,nssv2597534 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946924 1 146660249 146660992 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597606,nssv2598564,nssv2597580,nssv2597636,nssv2597593,nssv2597574,nssv2597599,nssv2598578,nssv2598569,nssv2597623,nssv2597587,nssv2598566,nssv2597582,nssv2597601,nssv2597576,nssv2597635,nssv2597578,nssv2597616,nssv2598575,nssv2597633,nssv2597589,nssv2597619,nssv2598568,nssv2597621,nssv2597577,nssv2597627,nssv2597594,nssv2597604,nssv2597595,nssv2597610,nssv2597602,nssv2597626,nssv2597603,nssv2597609,nssv2598572,nssv2597612,nssv2597586,nssv2597622,nssv2598574,nssv2597614,nssv2598576,nssv2597625,nssv2597583,nssv2597608,nssv2597592,nssv2597617,nssv2597585,nssv2597632,nssv2597605,nssv2597630,nssv2598570,nssv2597607,nssv2598573,nssv2597597,nssv2597596,nssv2597613,nssv2598577,nssv2597634,nssv2597588,nssv2598565,nssv2597575,nssv2597624,nssv2597579,nssv2597639,nssv2598571,nssv2597631,nssv2597591,nssv2597620,nssv2597590,nssv2597618,nssv2597581,nssv2597615,nssv2597598,nssv2597600,nssv2597584,nssv2597629,nssv2597638,nssv2598567,nssv2597628,nssv2597637,nssv2597611 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946925 1 146660249 146661586 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598589,nssv2598584,nssv2598582,nssv2598583,nssv2598586,nssv2598580,nssv2598581,nssv2598587,nssv2598588,nssv2598579,nssv2598585 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946926 1 146660992 146661586 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598654,nssv2598591,nssv2598670,nssv2598597,nssv2598623,nssv2598605,nssv2598649,nssv2598601,nssv2598636,nssv2598661,nssv2598653,nssv2598592,nssv2598646,nssv2598611,nssv2598616,nssv2598621,nssv2598655,nssv2598663,nssv2598625,nssv2598669,nssv2598627,nssv2598595,nssv2598629,nssv2598618,nssv2598633,nssv2598609,nssv2598648,nssv2598612,nssv2598647,nssv2598606,nssv2598624,nssv2598667,nssv2598650,nssv2598662,nssv2598645,nssv2598603,nssv2598628,nssv2598664,nssv2598641,nssv2598607,nssv2598638,nssv2598619,nssv2598651,nssv2598622,nssv2598631,nssv2598614,nssv2598639,nssv2598593,nssv2598644,nssv2598596,nssv2598652,nssv2598660,nssv2598620,nssv2598665,nssv2598590,nssv2598594,nssv2598659,nssv2598604,nssv2598657,nssv2598615,nssv2598634,nssv2598602,nssv2598635,nssv2598598,nssv2598626,nssv2598600,nssv2598613,nssv2598608,nssv2598630,nssv2598599,nssv2598617,nssv2598668,nssv2598658,nssv2598666,nssv2598642,nssv2598610,nssv2598643,nssv2598637,nssv2598656,nssv2598640,nssv2598632 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946927 1 146661586 146662260 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598681,nssv2598751,nssv2598703,nssv2598694,nssv2598690,nssv2598739,nssv2598743,nssv2598740,nssv2598673,nssv2598711,nssv2598700,nssv2598714,nssv2598749,nssv2598734,nssv2598672,nssv2598756,nssv2598742,nssv2598706,nssv2598747,nssv2598723,nssv2598680,nssv2598732,nssv2598695,nssv2598671,nssv2598686,nssv2598716,nssv2598762,nssv2598721,nssv2598746,nssv2598730,nssv2598755,nssv2598710,nssv2598674,nssv2598757,nssv2598679,nssv2598709,nssv2598688,nssv2598753,nssv2598692,nssv2598729,nssv2598754,nssv2598727,nssv2598696,nssv2598712,nssv2598677,nssv2598733,nssv2598687,nssv2598697,nssv2598750,nssv2598720,nssv2598678,nssv2598725,nssv2598759,nssv2598707,nssv2598702,nssv2598760,nssv2598745,nssv2598698,nssv2598693,nssv2598738,nssv2598691,nssv2598731,nssv2598699,nssv2598719,nssv2598675,nssv2598726,nssv2598748,nssv2598722,nssv2598685,nssv2598701,nssv2598744,nssv2598717,nssv2598758,nssv2598704,nssv2598682,nssv2598715,nssv2598684,nssv2598736,nssv2598683,nssv2598724,nssv2598741,nssv2598713,nssv2598676,nssv2598737,nssv2598761,nssv2598705,nssv2598689,nssv2598718,nssv2598708,nssv2598752,nssv2598735,nssv2598728 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946928 1 146662260 146663677 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597647,nssv2598786,nssv2597706,nssv2597675,nssv2597698,nssv2598763,nssv2598784,nssv2597653,nssv2597699,nssv2597661,nssv2597692,nssv2597641,nssv2598783,nssv2597656,nssv2598787,nssv2597678,nssv2598780,nssv2597677,nssv2598765,nssv2597648,nssv2598781,nssv2597672,nssv2597694,nssv2597684,nssv2598768,nssv2597704,nssv2597686,nssv2597683,nssv2598777,nssv2597663,nssv2598782,nssv2597655,nssv2597690,nssv2597657,nssv2598764,nssv2597642,nssv2598774,nssv2597650,nssv2597646,nssv2597667,nssv2598771,nssv2597665,nssv2597691,nssv2597674,nssv2597703,nssv2597651,nssv2597705,nssv2597652,nssv2597702,nssv2597701,nssv2597688,nssv2597673,nssv2597693,nssv2597670,nssv2598779,nssv2597681,nssv2597644,nssv2597645,nssv2598766,nssv2597654,nssv2598775,nssv2597679,nssv2597685,nssv2597671,nssv2598778,nssv2597669,nssv2598776,nssv2597695,nssv2597687,nssv2597696,nssv2597643,nssv2597658,nssv2598769,nssv2597682,nssv2598770,nssv2597697,nssv2598785,nssv2597662,nssv2597640,nssv2597659,nssv2598773,nssv2597680,nssv2598772,nssv2597660,nssv2598767,nssv2597676,nssv2597689,nssv2597666,nssv2597649,nssv2597700,nssv2597668,nssv2597664 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946929 1 146663677 146664802 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597739,nssv2597734,nssv2597798,nssv2597776,nssv2597782,nssv2597788,nssv2597797,nssv2597753,nssv2597722,nssv2597742,nssv2597723,nssv2597774,nssv2597721,nssv2597763,nssv2597783,nssv2597752,nssv2597727,nssv2597793,nssv2597795,nssv2597757,nssv2597732,nssv2597740,nssv2597726,nssv2597787,nssv2597735,nssv2597768,nssv2597719,nssv2597772,nssv2597712,nssv2597747,nssv2597781,nssv2597771,nssv2597718,nssv2597758,nssv2597780,nssv2597789,nssv2597791,nssv2597756,nssv2597785,nssv2597761,nssv2597709,nssv2597730,nssv2597731,nssv2597754,nssv2597715,nssv2597760,nssv2597790,nssv2597745,nssv2597794,nssv2597770,nssv2597784,nssv2597767,nssv2597725,nssv2597766,nssv2597710,nssv2597796,nssv2597738,nssv2597775,nssv2597779,nssv2597749,nssv2597786,nssv2597751,nssv2597728,nssv2597769,nssv2597711,nssv2597750,nssv2597736,nssv2597762,nssv2597777,nssv2597748,nssv2597729,nssv2597755,nssv2597714,nssv2597741,nssv2597720,nssv2597743,nssv2597716,nssv2597764,nssv2597713,nssv2597765,nssv2597724,nssv2597737,nssv2597778,nssv2597746,nssv2597708,nssv2597707,nssv2597717,nssv2597773,nssv2597759,nssv2597733,nssv2597744,nssv2597792 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946930 1 146664802 146665643 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597831,nssv2597859,nssv2597890,nssv2597884,nssv2597818,nssv2597863,nssv2597875,nssv2597833,nssv2597821,nssv2597879,nssv2597883,nssv2597838,nssv2597871,nssv2597866,nssv2597803,nssv2597860,nssv2597870,nssv2597826,nssv2597805,nssv2597832,nssv2597823,nssv2597835,nssv2597807,nssv2597881,nssv2597876,nssv2597849,nssv2597801,nssv2597851,nssv2597813,nssv2597844,nssv2597814,nssv2597856,nssv2597806,nssv2597847,nssv2597810,nssv2597850,nssv2597828,nssv2597829,nssv2597802,nssv2597867,nssv2597889,nssv2597848,nssv2597815,nssv2597888,nssv2597878,nssv2597845,nssv2597811,nssv2597857,nssv2597816,nssv2597880,nssv2597882,nssv2597836,nssv2597819,nssv2597842,nssv2597804,nssv2597846,nssv2597824,nssv2597841,nssv2597830,nssv2597822,nssv2597877,nssv2597839,nssv2597809,nssv2597864,nssv2597869,nssv2597834,nssv2597874,nssv2597862,nssv2597886,nssv2597837,nssv2597887,nssv2597852,nssv2597827,nssv2597854,nssv2597808,nssv2597799,nssv2597817,nssv2597825,nssv2597873,nssv2597885,nssv2597820,nssv2597853,nssv2597872,nssv2597855,nssv2597800,nssv2597858,nssv2597812,nssv2597840,nssv2597865,nssv2597868,nssv2597843,nssv2597861 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946931 1 146665643 146666911 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597923,nssv2597918,nssv2597910,nssv2597947,nssv2598276,nssv2597927,nssv2597913,nssv2597917,nssv2597903,nssv2597891,nssv2597922,nssv2597937,nssv2597904,nssv2597936,nssv2597915,nssv2598264,nssv2598270,nssv2598262,nssv2597908,nssv2597940,nssv2597896,nssv2597932,nssv2598275,nssv2597933,nssv2597893,nssv2597914,nssv2597912,nssv2598263,nssv2597902,nssv2597924,nssv2597906,nssv2597929,nssv2598274,nssv2598266,nssv2597894,nssv2597925,nssv2597916,nssv2598258,nssv2597897,nssv2598279,nssv2597901,nssv2597934,nssv2597911,nssv2598257,nssv2598271,nssv2597935,nssv2597898,nssv2597946,nssv2597907,nssv2598259,nssv2598269,nssv2597938,nssv2598277,nssv2598256,nssv2597905,nssv2598260,nssv2597899,nssv2597943,nssv2598272,nssv2598265,nssv2597920,nssv2598267,nssv2598273,nssv2597939,nssv2597892,nssv2597931,nssv2598278,nssv2597944,nssv2597895,nssv2597930,nssv2597900,nssv2597945,nssv2597919,nssv2597928,nssv2597909,nssv2598261,nssv2597926,nssv2597941,nssv2597921,nssv2597942,nssv2598268 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946932 1 146665643 146667659 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598290,nssv2598285,nssv2598283,nssv2598284,nssv2598287,nssv2598281,nssv2598282,nssv2598280,nssv2598289,nssv2598288,nssv2598286 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946933 1 146666911 146667659 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598348,nssv2598307,nssv2598330,nssv2598295,nssv2598334,nssv2598370,nssv2598353,nssv2598323,nssv2598341,nssv2598321,nssv2598326,nssv2598320,nssv2598355,nssv2598304,nssv2598357,nssv2598309,nssv2598354,nssv2598316,nssv2598328,nssv2598313,nssv2598352,nssv2598299,nssv2598349,nssv2598301,nssv2598331,nssv2598317,nssv2598322,nssv2598298,nssv2598347,nssv2598296,nssv2598329,nssv2598303,nssv2598325,nssv2598368,nssv2598337,nssv2598366,nssv2598336,nssv2598362,nssv2598327,nssv2598369,nssv2598350,nssv2598294,nssv2598292,nssv2598314,nssv2598335,nssv2598305,nssv2598351,nssv2598302,nssv2598318,nssv2598300,nssv2598358,nssv2598363,nssv2598315,nssv2598308,nssv2598339,nssv2598293,nssv2598333,nssv2598297,nssv2598346,nssv2598367,nssv2598342,nssv2598364,nssv2598345,nssv2598324,nssv2598361,nssv2598371,nssv2598360,nssv2598306,nssv2598340,nssv2598365,nssv2598332,nssv2598312,nssv2598356,nssv2598311,nssv2598319,nssv2598310,nssv2598338,nssv2598343,nssv2598359,nssv2598344,nssv2598291 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946934 1 146667659 146668159 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598385,nssv2598442,nssv2598462,nssv2598438,nssv2598398,nssv2598430,nssv2598397,nssv2598427,nssv2598393,nssv2598451,nssv2598458,nssv2598439,nssv2598403,nssv2598376,nssv2598375,nssv2598432,nssv2598387,nssv2598418,nssv2598409,nssv2598380,nssv2598399,nssv2598414,nssv2598394,nssv2598448,nssv2598390,nssv2598446,nssv2598396,nssv2598431,nssv2598459,nssv2598373,nssv2598395,nssv2598445,nssv2598388,nssv2598452,nssv2598379,nssv2598450,nssv2598457,nssv2598428,nssv2598382,nssv2598433,nssv2598381,nssv2598417,nssv2598378,nssv2598425,nssv2598454,nssv2598429,nssv2598461,nssv2598447,nssv2598408,nssv2598384,nssv2598402,nssv2598411,nssv2598460,nssv2598410,nssv2598374,nssv2598424,nssv2598401,nssv2598423,nssv2598404,nssv2598436,nssv2598455,nssv2598440,nssv2598456,nssv2598441,nssv2598405,nssv2598453,nssv2598386,nssv2598426,nssv2598389,nssv2598420,nssv2598416,nssv2598419,nssv2598412,nssv2598422,nssv2598415,nssv2598443,nssv2598406,nssv2598434,nssv2598463,nssv2598377,nssv2598413,nssv2598437,nssv2598392,nssv2598449,nssv2598391,nssv2598444,nssv2598400,nssv2598383,nssv2598407,nssv2598372,nssv2598435,nssv2598421 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946935 1 146668159 146669447 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597048,nssv2598465,nssv2597024,nssv2597074,nssv2597044,nssv2597083,nssv2597086,nssv2597085,nssv2597095,nssv2597061,nssv2597091,nssv2597053,nssv2597031,nssv2597075,nssv2597025,nssv2597070,nssv2597047,nssv2598468,nssv2597030,nssv2597060,nssv2598467,nssv2597059,nssv2597033,nssv2597058,nssv2597094,nssv2597052,nssv2598482,nssv2597049,nssv2597027,nssv2597068,nssv2598478,nssv2597076,nssv2597045,nssv2597050,nssv2597032,nssv2597057,nssv2598483,nssv2597064,nssv2597037,nssv2597069,nssv2597089,nssv2597065,nssv2597028,nssv2597055,nssv2597088,nssv2597056,nssv2598479,nssv2598469,nssv2597040,nssv2598476,nssv2597036,nssv2597082,nssv2598471,nssv2597063,nssv2598474,nssv2597077,nssv2597090,nssv2597039,nssv2598481,nssv2597071,nssv2598480,nssv2598472,nssv2597093,nssv2597043,nssv2597034,nssv2597062,nssv2598473,nssv2597042,nssv2597041,nssv2597078,nssv2597092,nssv2597072,nssv2598477,nssv2597079,nssv2597087,nssv2597081,nssv2597029,nssv2597066,nssv2597038,nssv2597051,nssv2597035,nssv2598475,nssv2598466,nssv2597067,nssv2597026,nssv2597084,nssv2598470,nssv2597080,nssv2598464,nssv2597054,nssv2597073,nssv2597046 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946936 1 146669447 146670882 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597129,nssv2597159,nssv2597187,nssv2597160,nssv2597171,nssv2597138,nssv2597108,nssv2597162,nssv2597100,nssv2597146,nssv2597105,nssv2597148,nssv2597115,nssv2597144,nssv2597119,nssv2597161,nssv2597125,nssv2597139,nssv2597169,nssv2597151,nssv2597128,nssv2597185,nssv2597110,nssv2597166,nssv2597102,nssv2597133,nssv2597174,nssv2597155,nssv2597126,nssv2597156,nssv2597183,nssv2597130,nssv2597172,nssv2597140,nssv2597106,nssv2597147,nssv2597167,nssv2597177,nssv2597107,nssv2597178,nssv2597179,nssv2597123,nssv2597113,nssv2597145,nssv2597098,nssv2597149,nssv2597104,nssv2597165,nssv2597111,nssv2597143,nssv2597114,nssv2597181,nssv2597101,nssv2597152,nssv2597103,nssv2597135,nssv2597121,nssv2597153,nssv2597099,nssv2597142,nssv2597112,nssv2597154,nssv2597168,nssv2597137,nssv2597109,nssv2597163,nssv2597176,nssv2597150,nssv2597175,nssv2597134,nssv2597117,nssv2597136,nssv2597173,nssv2597131,nssv2597122,nssv2597158,nssv2597118,nssv2597182,nssv2597170,nssv2597097,nssv2597116,nssv2597124,nssv2597180,nssv2597141,nssv2597184,nssv2597096,nssv2597186,nssv2597157,nssv2597127,nssv2597120,nssv2597132,nssv2597164 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946937 1 146670882 146671556 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597210,nssv2597257,nssv2597206,nssv2597249,nssv2597209,nssv2597231,nssv2597219,nssv2597251,nssv2597266,nssv2597240,nssv2597194,nssv2597227,nssv2597220,nssv2597255,nssv2597277,nssv2597222,nssv2597274,nssv2597242,nssv2597213,nssv2597232,nssv2597262,nssv2597256,nssv2597193,nssv2597236,nssv2597196,nssv2597235,nssv2597264,nssv2597228,nssv2597216,nssv2597254,nssv2597260,nssv2597237,nssv2597217,nssv2597218,nssv2597199,nssv2597247,nssv2597212,nssv2597253,nssv2597208,nssv2597246,nssv2597204,nssv2597215,nssv2597200,nssv2597243,nssv2597190,nssv2597229,nssv2597202,nssv2597224,nssv2597270,nssv2597230,nssv2597201,nssv2597214,nssv2597207,nssv2597248,nssv2597271,nssv2597279,nssv2597263,nssv2597268,nssv2597203,nssv2597250,nssv2597205,nssv2597241,nssv2597261,nssv2597273,nssv2597189,nssv2597188,nssv2597265,nssv2597269,nssv2597198,nssv2597234,nssv2597258,nssv2597238,nssv2597267,nssv2597223,nssv2597259,nssv2597233,nssv2597192,nssv2597221,nssv2597195,nssv2597211,nssv2597197,nssv2597276,nssv2597191,nssv2597239,nssv2597278,nssv2597225,nssv2597275,nssv2597226,nssv2597252,nssv2597272,nssv2597245,nssv2597244 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946938 1 146671556 146672304 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597305,nssv2597319,nssv2597983,nssv2597949,nssv2597294,nssv2597284,nssv2597310,nssv2597327,nssv2597306,nssv2597952,nssv2597984,nssv2597959,nssv2597314,nssv2597971,nssv2597296,nssv2597958,nssv2597297,nssv2597955,nssv2597302,nssv2597948,nssv2597986,nssv2597330,nssv2597289,nssv2597951,nssv2597985,nssv2597964,nssv2597282,nssv2597967,nssv2597979,nssv2597326,nssv2597307,nssv2597969,nssv2597286,nssv2597966,nssv2597321,nssv2597960,nssv2597978,nssv2597953,nssv2597324,nssv2597977,nssv2597304,nssv2597974,nssv2597303,nssv2597968,nssv2597300,nssv2597954,nssv2597317,nssv2597331,nssv2597293,nssv2597280,nssv2597301,nssv2597961,nssv2597308,nssv2597315,nssv2597981,nssv2597976,nssv2597320,nssv2597325,nssv2597299,nssv2597972,nssv2597316,nssv2597975,nssv2597980,nssv2597957,nssv2597295,nssv2597950,nssv2597987,nssv2597281,nssv2597309,nssv2597322,nssv2597298,nssv2597973,nssv2597323,nssv2597288,nssv2597982,nssv2597956,nssv2597313,nssv2597285,nssv2597287,nssv2597318,nssv2597312,nssv2597328,nssv2597283,nssv2597329,nssv2597311,nssv2597965,nssv2597290,nssv2597970,nssv2597963,nssv2597292,nssv2597962,nssv2597291 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946939 1 146672304 146672804 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2597998,nssv2597993,nssv2597991,nssv2597996,nssv2597994,nssv2597999,nssv2597995,nssv2597992,nssv2597997,nssv2597988,nssv2597990,nssv2597989 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv14n82 1 146672304 146674098 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946940,nsv946941 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3393763 1 146673052 146676750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691967 M 185 1 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19239 nsv946943 1 146674098 146674828 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598170,nssv2598128,nssv2598103,nssv2598126,nssv2598094,nssv2598125,nssv2598117,nssv2598146,nssv2598100,nssv2598127,nssv2598120,nssv2598115,nssv2598106,nssv2598137,nssv2598165,nssv2598130,nssv2598098,nssv2598131,nssv2598168,nssv2598145,nssv2598121,nssv2598129,nssv2598163,nssv2598147,nssv2598123,nssv2598138,nssv2598110,nssv2598133,nssv2598114,nssv2598139,nssv2598097,nssv2598158,nssv2598095,nssv2598160,nssv2598096,nssv2598118,nssv2598169,nssv2598156,nssv2598101,nssv2598159,nssv2598112,nssv2598144,nssv2598105,nssv2598149,nssv2598124,nssv2598092,nssv2598093,nssv2598143,nssv2598099,nssv2598161,nssv2598102,nssv2598140,nssv2598111,nssv2598153,nssv2598166,nssv2598155,nssv2598113,nssv2598141,nssv2598164,nssv2598154,nssv2598162,nssv2598151,nssv2598167,nssv2598148,nssv2598104,nssv2598122,nssv2598107,nssv2598142,nssv2598108,nssv2598136,nssv2598109,nssv2598132,nssv2598171,nssv2598152,nssv2598116,nssv2598135,nssv2598150,nssv2598134,nssv2598119,nssv2598157 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946944 1 146674098 146676037 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596726,nssv2596716,nssv2596722,nssv2596721,nssv2596725,nssv2596720,nssv2596719,nssv2596717,nssv2596723,nssv2596724,nssv2596718 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946945 1 146674828 146676037 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596772,nssv2596737,nssv2596763,nssv2596743,nssv2596787,nssv2596731,nssv2596750,nssv2596756,nssv2596788,nssv2596739,nssv2596796,nssv2596803,nssv2596754,nssv2596802,nssv2596777,nssv2596738,nssv2596774,nssv2596751,nssv2596762,nssv2596744,nssv2596768,nssv2596758,nssv2596790,nssv2596735,nssv2596792,nssv2596755,nssv2596764,nssv2596734,nssv2596760,nssv2596745,nssv2596727,nssv2596740,nssv2596766,nssv2596804,nssv2596807,nssv2596736,nssv2596776,nssv2596805,nssv2596783,nssv2596741,nssv2596791,nssv2596747,nssv2596775,nssv2596732,nssv2596785,nssv2596733,nssv2596795,nssv2596759,nssv2596789,nssv2596728,nssv2596780,nssv2596746,nssv2596757,nssv2596798,nssv2596779,nssv2596806,nssv2596769,nssv2596742,nssv2596767,nssv2596799,nssv2596770,nssv2596800,nssv2596753,nssv2596797,nssv2596771,nssv2596729,nssv2596773,nssv2596748,nssv2596778,nssv2596730,nssv2596784,nssv2596749,nssv2596793,nssv2596801,nssv2596765,nssv2596752,nssv2596794,nssv2596781,nssv2596786,nssv2596761,nssv2596782 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946946 1 146676037 146677459 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596893,nssv2596856,nssv2596822,nssv2596872,nssv2596899,nssv2596858,nssv2596828,nssv2596859,nssv2596815,nssv2596876,nssv2596842,nssv2596857,nssv2596836,nssv2596808,nssv2596824,nssv2596812,nssv2596896,nssv2596880,nssv2596810,nssv2596846,nssv2596832,nssv2596847,nssv2596851,nssv2596874,nssv2596835,nssv2596885,nssv2596831,nssv2596820,nssv2596897,nssv2596862,nssv2596825,nssv2596877,nssv2596837,nssv2596863,nssv2596826,nssv2596855,nssv2596841,nssv2596809,nssv2596890,nssv2596843,nssv2596844,nssv2596867,nssv2596892,nssv2596889,nssv2596830,nssv2596853,nssv2596894,nssv2596888,nssv2596834,nssv2596873,nssv2596895,nssv2596813,nssv2596811,nssv2596854,nssv2596891,nssv2596875,nssv2596827,nssv2596860,nssv2596814,nssv2596879,nssv2596845,nssv2596819,nssv2596838,nssv2596869,nssv2596849,nssv2596887,nssv2596839,nssv2596864,nssv2596817,nssv2596871,nssv2596848,nssv2596850,nssv2596852,nssv2596886,nssv2596823,nssv2596884,nssv2596829,nssv2596883,nssv2596833,nssv2596868,nssv2596898,nssv2596861,nssv2596821,nssv2596882,nssv2596840,nssv2596816,nssv2596818,nssv2596865,nssv2596866,nssv2596878,nssv2596870,nssv2596881 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3365253 1 146677252 146694850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691968 M 185 1 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19239 nsv946947 1 146677459 146678120 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596991,nssv2596963,nssv2596937,nssv2596953,nssv2596984,nssv2596977,nssv2596927,nssv2596978,nssv2596928,nssv2596964,nssv2596924,nssv2596952,nssv2596914,nssv2596912,nssv2596903,nssv2596935,nssv2596987,nssv2596938,nssv2596990,nssv2596901,nssv2596926,nssv2596947,nssv2596925,nssv2596980,nssv2596923,nssv2596911,nssv2596922,nssv2596939,nssv2596934,nssv2596965,nssv2596982,nssv2596970,nssv2596986,nssv2596976,nssv2596985,nssv2596955,nssv2596913,nssv2596979,nssv2596906,nssv2596972,nssv2596929,nssv2596975,nssv2596988,nssv2596900,nssv2596940,nssv2596958,nssv2596915,nssv2596974,nssv2596944,nssv2596981,nssv2596918,nssv2596971,nssv2596920,nssv2596966,nssv2596916,nssv2596969,nssv2596932,nssv2596968,nssv2596943,nssv2596959,nssv2596909,nssv2596949,nssv2596921,nssv2596950,nssv2596983,nssv2596960,nssv2596931,nssv2596905,nssv2596989,nssv2596957,nssv2596930,nssv2596951,nssv2596902,nssv2596973,nssv2596933,nssv2596962,nssv2596917,nssv2596948,nssv2596919,nssv2596961,nssv2596910,nssv2596967,nssv2596907,nssv2596904,nssv2596941,nssv2596946,nssv2596936,nssv2596942,nssv2596956,nssv2596945,nssv2596954,nssv2596908 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946948 1 146678120 146679471 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2596994,nssv2596993,nssv2596998,nssv2596992,nssv2597001,nssv2597000,nssv2597002,nssv2596997,nssv2596999,nssv2597003,nssv2596995,nssv2596996 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946949 1 146678120 146680086 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598930,nssv2598913,nssv2598874,nssv2598889,nssv2597012,nssv2598892,nssv2597014,nssv2598885,nssv2598925,nssv2598914,nssv2597007,nssv2598907,nssv2598929,nssv2598908,nssv2597020,nssv2598919,nssv2598923,nssv2598899,nssv2597010,nssv2598896,nssv2597016,nssv2598902,nssv2598881,nssv2598897,nssv2598927,nssv2598890,nssv2598873,nssv2598916,nssv2597018,nssv2598878,nssv2597019,nssv2598875,nssv2597013,nssv2598912,nssv2597022,nssv2598888,nssv2598877,nssv2598894,nssv2598880,nssv2598903,nssv2597021,nssv2598882,nssv2597008,nssv2598900,nssv2597015,nssv2597004,nssv2598876,nssv2598895,nssv2598883,nssv2598898,nssv2598872,nssv2598915,nssv2598931,nssv2598911,nssv2598922,nssv2598906,nssv2597017,nssv2598901,nssv2597006,nssv2598910,nssv2598924,nssv2598893,nssv2598884,nssv2598918,nssv2597023,nssv2598921,nssv2597005,nssv2598887,nssv2597011,nssv2598891,nssv2598928,nssv2598905,nssv2597009,nssv2598909,nssv2598926,nssv2598879,nssv2598920,nssv2598917,nssv2598904,nssv2598886 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946950 1 146679471 146680086 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598935,nssv2598943,nssv2598938,nssv2598936,nssv2598942,nssv2598933,nssv2598941,nssv2598932,nssv2598939,nssv2598937,nssv2598934,nssv2598940 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946951 1 146680086 146680680 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598954,nssv2599022,nssv2598968,nssv2598999,nssv2598964,nssv2598955,nssv2599027,nssv2598981,nssv2598969,nssv2599023,nssv2598975,nssv2599002,nssv2598987,nssv2598996,nssv2598973,nssv2598993,nssv2598972,nssv2598944,nssv2599033,nssv2598991,nssv2598959,nssv2599006,nssv2598970,nssv2599010,nssv2598977,nssv2599009,nssv2599031,nssv2599024,nssv2599029,nssv2599014,nssv2598966,nssv2599003,nssv2599028,nssv2598948,nssv2598950,nssv2599012,nssv2598957,nssv2599017,nssv2599025,nssv2599019,nssv2598984,nssv2598998,nssv2598953,nssv2599005,nssv2598986,nssv2598978,nssv2598951,nssv2598952,nssv2598983,nssv2598997,nssv2598946,nssv2599007,nssv2599032,nssv2599004,nssv2598963,nssv2599008,nssv2598967,nssv2599018,nssv2598979,nssv2599020,nssv2598974,nssv2599000,nssv2598956,nssv2598995,nssv2599030,nssv2598982,nssv2598960,nssv2599013,nssv2599026,nssv2599016,nssv2598962,nssv2598990,nssv2599034,nssv2598949,nssv2598958,nssv2598989,nssv2598971,nssv2598988,nssv2598980,nssv2599011,nssv2598961,nssv2598992,nssv2598976,nssv2599001,nssv2598947,nssv2598985,nssv2598965,nssv2599035,nssv2598994,nssv2599021,nssv2598945,nssv2599015 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946952 1 146680680 146681509 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599057,nssv2599099,nssv2599043,nssv2599101,nssv2599060,nssv2599073,nssv2599059,nssv2598799,nssv2599052,nssv2599095,nssv2599039,nssv2598798,nssv2599079,nssv2599037,nssv2599061,nssv2599082,nssv2599068,nssv2599094,nssv2598802,nssv2599096,nssv2599075,nssv2599081,nssv2599049,nssv2598812,nssv2599071,nssv2599097,nssv2598804,nssv2598797,nssv2599051,nssv2599036,nssv2598808,nssv2599093,nssv2599069,nssv2598789,nssv2599053,nssv2598794,nssv2599078,nssv2598791,nssv2598805,nssv2598801,nssv2599067,nssv2598790,nssv2599046,nssv2599074,nssv2599065,nssv2599077,nssv2599058,nssv2599086,nssv2598803,nssv2598795,nssv2599063,nssv2599089,nssv2599064,nssv2599080,nssv2599062,nssv2599085,nssv2599054,nssv2599040,nssv2599056,nssv2598792,nssv2599055,nssv2599090,nssv2598811,nssv2598788,nssv2599038,nssv2599084,nssv2598809,nssv2598800,nssv2599076,nssv2598793,nssv2598807,nssv2599070,nssv2599045,nssv2599087,nssv2599042,nssv2599100,nssv2599066,nssv2599098,nssv2598806,nssv2599041,nssv2598810,nssv2599092,nssv2599048,nssv2599088,nssv2599050,nssv2599102,nssv2599072,nssv2599044,nssv2599091,nssv2599083,nssv2599047,nssv2598796 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946953 1 146681509 146682102 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599811,nssv2598870,nssv2599816,nssv2598849,nssv2598828,nssv2598868,nssv2598835,nssv2598863,nssv2598816,nssv2599805,nssv2598827,nssv2599796,nssv2598820,nssv2598847,nssv2598838,nssv2598857,nssv2598817,nssv2598836,nssv2598824,nssv2598859,nssv2598830,nssv2598867,nssv2598831,nssv2598840,nssv2598834,nssv2599799,nssv2598826,nssv2598843,nssv2599820,nssv2598850,nssv2599807,nssv2598855,nssv2598845,nssv2598860,nssv2599808,nssv2599822,nssv2599814,nssv2599798,nssv2598832,nssv2599802,nssv2598821,nssv2598854,nssv2599828,nssv2598871,nssv2598833,nssv2598839,nssv2598818,nssv2598869,nssv2598814,nssv2598858,nssv2598842,nssv2598813,nssv2598841,nssv2598848,nssv2598837,nssv2598866,nssv2598822,nssv2599800,nssv2599827,nssv2598851,nssv2598844,nssv2598846,nssv2599825,nssv2599817,nssv2599821,nssv2598861,nssv2599812,nssv2599803,nssv2598819,nssv2599818,nssv2599813,nssv2599797,nssv2599815,nssv2598864,nssv2598815,nssv2599823,nssv2598829,nssv2599806,nssv2599824,nssv2599819,nssv2598825,nssv2599801,nssv2598823,nssv2598856,nssv2599810,nssv2598852,nssv2599809,nssv2599804,nssv2598853,nssv2598862,nssv2599826,nssv2598865 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946954 1 146682102 146682771 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599831,nssv2599873,nssv2599837,nssv2599910,nssv2599916,nssv2599876,nssv2599901,nssv2599874,nssv2599830,nssv2599852,nssv2599848,nssv2599864,nssv2599843,nssv2599892,nssv2599904,nssv2599878,nssv2599861,nssv2599875,nssv2599899,nssv2599891,nssv2599845,nssv2599896,nssv2599919,nssv2599888,nssv2599851,nssv2599897,nssv2599833,nssv2599890,nssv2599836,nssv2599883,nssv2599900,nssv2599895,nssv2599903,nssv2599867,nssv2599832,nssv2599893,nssv2599835,nssv2599829,nssv2599902,nssv2599866,nssv2599913,nssv2599869,nssv2599840,nssv2599859,nssv2599850,nssv2599885,nssv2599853,nssv2599884,nssv2599920,nssv2599887,nssv2599854,nssv2599918,nssv2599841,nssv2599863,nssv2599857,nssv2599865,nssv2599839,nssv2599915,nssv2599849,nssv2599886,nssv2599912,nssv2599856,nssv2599838,nssv2599881,nssv2599860,nssv2599880,nssv2599917,nssv2599914,nssv2599905,nssv2599909,nssv2599846,nssv2599882,nssv2599842,nssv2599862,nssv2599908,nssv2599889,nssv2599907,nssv2599872,nssv2599834,nssv2599855,nssv2599858,nssv2599868,nssv2599844,nssv2599879,nssv2599906,nssv2599871,nssv2599847,nssv2599898,nssv2599877,nssv2599894,nssv2599870,nssv2599911 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946955 1 146682771 146683896 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599926,nssv2599970,nssv2599994,nssv2599978,nssv2599935,nssv2600012,nssv2599946,nssv2599989,nssv2599934,nssv2599962,nssv2600000,nssv2599944,nssv2599929,nssv2599974,nssv2599999,nssv2599971,nssv2599942,nssv2599976,nssv2599940,nssv2599988,nssv2599924,nssv2600005,nssv2600003,nssv2599951,nssv2599953,nssv2599956,nssv2599931,nssv2600006,nssv2599932,nssv2599955,nssv2599922,nssv2599964,nssv2600004,nssv2599986,nssv2599939,nssv2599957,nssv2600011,nssv2599987,nssv2599925,nssv2599960,nssv2599996,nssv2599975,nssv2599936,nssv2599979,nssv2600010,nssv2599954,nssv2599937,nssv2599981,nssv2599992,nssv2599963,nssv2599993,nssv2599966,nssv2599928,nssv2599969,nssv2599933,nssv2600009,nssv2599941,nssv2600001,nssv2599923,nssv2599982,nssv2599952,nssv2599977,nssv2599930,nssv2599973,nssv2599945,nssv2599968,nssv2599943,nssv2599921,nssv2599998,nssv2600002,nssv2599950,nssv2599967,nssv2599997,nssv2599985,nssv2600007,nssv2599965,nssv2599927,nssv2599959,nssv2600008,nssv2599947,nssv2599991,nssv2599984,nssv2599995,nssv2599958,nssv2599938,nssv2599990,nssv2599949,nssv2599972,nssv2599983,nssv2599980,nssv2599961,nssv2599948 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946956 1 146683896 146684741 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600028,nssv2600070,nssv2600100,nssv2600082,nssv2600083,nssv2600051,nssv2600086,nssv2600078,nssv2600030,nssv2600036,nssv2600041,nssv2600063,nssv2600088,nssv2600050,nssv2600018,nssv2600046,nssv2600087,nssv2600049,nssv2600019,nssv2600068,nssv2600089,nssv2600059,nssv2600085,nssv2600073,nssv2600031,nssv2600077,nssv2600015,nssv2600094,nssv2600029,nssv2600066,nssv2600092,nssv2600061,nssv2600035,nssv2600054,nssv2600034,nssv2600080,nssv2600026,nssv2600055,nssv2600021,nssv2600072,nssv2600032,nssv2600079,nssv2600020,nssv2600064,nssv2600024,nssv2600098,nssv2600099,nssv2600069,nssv2600014,nssv2600043,nssv2600096,nssv2600081,nssv2600023,nssv2600097,nssv2600091,nssv2600058,nssv2600044,nssv2600047,nssv2600095,nssv2600040,nssv2600102,nssv2600060,nssv2600025,nssv2600013,nssv2600016,nssv2600093,nssv2600033,nssv2600048,nssv2600090,nssv2600065,nssv2600017,nssv2600076,nssv2600084,nssv2600101,nssv2600042,nssv2600074,nssv2600038,nssv2601028,nssv2600103,nssv2600057,nssv2600027,nssv2600067,nssv2600045,nssv2600039,nssv2600037,nssv2600056,nssv2600022,nssv2600075,nssv2600071,nssv2600062,nssv2600053,nssv2600052 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946957 1 146684741 146686009 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601058,nssv2601109,nssv2601044,nssv2601096,nssv2601053,nssv2601093,nssv2601115,nssv2601074,nssv2601116,nssv2601095,nssv2601049,nssv2601110,nssv2601054,nssv2601069,nssv2601057,nssv2601073,nssv2601105,nssv2601120,nssv2601118,nssv2601063,nssv2601045,nssv2601065,nssv2601100,nssv2601071,nssv2601119,nssv2601089,nssv2601030,nssv2601081,nssv2601111,nssv2601091,nssv2601106,nssv2601090,nssv2601104,nssv2601098,nssv2601043,nssv2601075,nssv2601103,nssv2601084,nssv2601033,nssv2601076,nssv2601061,nssv2601094,nssv2601047,nssv2601114,nssv2601042,nssv2601117,nssv2601046,nssv2601077,nssv2601041,nssv2601052,nssv2601050,nssv2601097,nssv2601032,nssv2601062,nssv2601051,nssv2601079,nssv2601039,nssv2601067,nssv2601060,nssv2601086,nssv2601038,nssv2601078,nssv2601035,nssv2601080,nssv2601037,nssv2601070,nssv2601031,nssv2601087,nssv2601108,nssv2601085,nssv2601099,nssv2601113,nssv2601040,nssv2601092,nssv2601102,nssv2601056,nssv2601101,nssv2601068,nssv2601112,nssv2601083,nssv2601107,nssv2601082,nssv2601048,nssv2601055,nssv2601034,nssv2601088,nssv2601036,nssv2601029,nssv2601072,nssv2601059,nssv2601066,nssv2601064 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946958 1 146686009 146686757 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601150,nssv2601164,nssv2601129,nssv2601159,nssv2601128,nssv2601157,nssv2601130,nssv2598486,nssv2601131,nssv2598499,nssv2601123,nssv2598502,nssv2598507,nssv2598498,nssv2598520,nssv2601165,nssv2601124,nssv2601148,nssv2598519,nssv2601158,nssv2601137,nssv2598491,nssv2598527,nssv2598487,nssv2601142,nssv2601154,nssv2601141,nssv2598495,nssv2601122,nssv2598490,nssv2601143,nssv2598496,nssv2598515,nssv2601162,nssv2601136,nssv2598488,nssv2598526,nssv2598525,nssv2601152,nssv2598505,nssv2601138,nssv2598500,nssv2601146,nssv2598522,nssv2598510,nssv2598518,nssv2601125,nssv2601163,nssv2598511,nssv2601155,nssv2598508,nssv2601168,nssv2601139,nssv2598521,nssv2598514,nssv2598501,nssv2598512,nssv2598494,nssv2601135,nssv2598503,nssv2601153,nssv2598516,nssv2601134,nssv2601147,nssv2598506,nssv2598497,nssv2601132,nssv2601166,nssv2601133,nssv2598492,nssv2598523,nssv2601160,nssv2601140,nssv2601151,nssv2601149,nssv2598517,nssv2598524,nssv2598489,nssv2601127,nssv2598484,nssv2598513,nssv2601167,nssv2601126,nssv2601144,nssv2601145,nssv2601161,nssv2598509,nssv2598485,nssv2598504,nssv2601121,nssv2601156,nssv2598493 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946959 1 146686757 146687257 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2598545,nssv2599490,nssv2598542,nssv2599512,nssv2598560,nssv2599516,nssv2598547,nssv2599496,nssv2599528,nssv2599492,nssv2598556,nssv2599518,nssv2599522,nssv2599519,nssv2598538,nssv2599509,nssv2598544,nssv2599498,nssv2598533,nssv2598554,nssv2598553,nssv2599497,nssv2599530,nssv2599488,nssv2599524,nssv2599508,nssv2598534,nssv2599513,nssv2598530,nssv2599532,nssv2598539,nssv2599504,nssv2599529,nssv2599510,nssv2598552,nssv2599506,nssv2599531,nssv2599517,nssv2598531,nssv2599507,nssv2598540,nssv2598562,nssv2598550,nssv2599521,nssv2598549,nssv2599495,nssv2599526,nssv2599501,nssv2598559,nssv2599520,nssv2598543,nssv2598558,nssv2599525,nssv2599502,nssv2598557,nssv2599500,nssv2598541,nssv2598561,nssv2598548,nssv2599511,nssv2598532,nssv2599489,nssv2598536,nssv2599514,nssv2598535,nssv2599494,nssv2598546,nssv2599503,nssv2598537,nssv2598528,nssv2599523,nssv2599499,nssv2598529,nssv2598551,nssv2599527,nssv2599491,nssv2599505,nssv2598555,nssv2599493,nssv2599515,nssv2598563 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv15n82 1 146686757 146688529 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946961,nsv946960 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946962 1 146688529 146689255 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599667,nssv2599670,nssv2599649,nssv2599697,nssv2599707,nssv2599682,nssv2599640,nssv2599685,nssv2599635,nssv2599701,nssv2599644,nssv2599687,nssv2599650,nssv2599691,nssv2599638,nssv2599695,nssv2599628,nssv2599636,nssv2599657,nssv2599666,nssv2599651,nssv2599663,nssv2599664,nssv2599674,nssv2599712,nssv2599681,nssv2599714,nssv2599686,nssv2599627,nssv2599676,nssv2599660,nssv2599677,nssv2599711,nssv2599671,nssv2599632,nssv2599625,nssv2599641,nssv2599689,nssv2599668,nssv2599696,nssv2599706,nssv2599690,nssv2599655,nssv2599629,nssv2599709,nssv2599683,nssv2599639,nssv2599699,nssv2599708,nssv2599633,nssv2599710,nssv2599694,nssv2599658,nssv2599675,nssv2599642,nssv2599704,nssv2599648,nssv2599630,nssv2599656,nssv2599716,nssv2599654,nssv2599698,nssv2599643,nssv2599705,nssv2599653,nssv2599702,nssv2599631,nssv2599684,nssv2599661,nssv2599673,nssv2599715,nssv2599693,nssv2599713,nssv2599678,nssv2599647,nssv2599672,nssv2599645,nssv2599669,nssv2599646,nssv2599679,nssv2599637,nssv2599700,nssv2599652,nssv2599692,nssv2599634,nssv2599688,nssv2599665,nssv2599626,nssv2599703,nssv2599659,nssv2599680,nssv2599662 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946963 1 146689255 146690638 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599753,nssv2600720,nssv2600729,nssv2599774,nssv2599720,nssv2599778,nssv2599727,nssv2599771,nssv2599760,nssv2599762,nssv2599757,nssv2599758,nssv2599740,nssv2599785,nssv2599747,nssv2599775,nssv2599745,nssv2599788,nssv2600722,nssv2599776,nssv2600724,nssv2599772,nssv2599734,nssv2599769,nssv2599726,nssv2599794,nssv2599742,nssv2599793,nssv2599735,nssv2599787,nssv2600728,nssv2599782,nssv2599724,nssv2599768,nssv2599732,nssv2599725,nssv2600731,nssv2599755,nssv2600726,nssv2599766,nssv2599756,nssv2599721,nssv2599719,nssv2599790,nssv2599731,nssv2599777,nssv2599744,nssv2599773,nssv2599723,nssv2599779,nssv2599752,nssv2599783,nssv2599741,nssv2599795,nssv2600727,nssv2599754,nssv2599738,nssv2599728,nssv2599739,nssv2599763,nssv2599730,nssv2599792,nssv2599743,nssv2599722,nssv2600725,nssv2599789,nssv2599749,nssv2599781,nssv2599737,nssv2599784,nssv2599750,nssv2599764,nssv2599759,nssv2599718,nssv2599733,nssv2599751,nssv2600723,nssv2599765,nssv2599746,nssv2599786,nssv2599736,nssv2599767,nssv2599729,nssv2599770,nssv2599748,nssv2600721,nssv2600730,nssv2600732,nssv2599761,nssv2599791,nssv2599780,nssv2599717 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946964 1 146690638 146691386 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600764,nssv2600774,nssv2600746,nssv2600802,nssv2600809,nssv2600781,nssv2600735,nssv2600798,nssv2600762,nssv2600795,nssv2600812,nssv2600797,nssv2600747,nssv2600784,nssv2600740,nssv2600796,nssv2600742,nssv2600767,nssv2600750,nssv2600778,nssv2600803,nssv2600813,nssv2600805,nssv2600733,nssv2600761,nssv2600763,nssv2600741,nssv2600766,nssv2600736,nssv2600771,nssv2600810,nssv2600801,nssv2600751,nssv2600799,nssv2600757,nssv2600783,nssv2600737,nssv2600776,nssv2600748,nssv2600789,nssv2600738,nssv2600768,nssv2600739,nssv2600785,nssv2600758,nssv2600788,nssv2600754,nssv2600791,nssv2600765,nssv2600775,nssv2600752,nssv2600800,nssv2600734,nssv2600780,nssv2600804,nssv2600760,nssv2600749,nssv2600779,nssv2600745,nssv2600790,nssv2600744,nssv2600794,nssv2600743,nssv2600792,nssv2600806,nssv2600782,nssv2600811,nssv2600756,nssv2600807,nssv2600777,nssv2600753,nssv2600772,nssv2600808,nssv2600786,nssv2600755,nssv2600793,nssv2600773,nssv2600787,nssv2600770,nssv2600759,nssv2600769 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv16n82 1 146690638 146693914 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946965,nsv946966 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946967 1 146693914 146695029 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599223,nssv2598254,nssv2598230,nssv2599190,nssv2598225,nssv2599192,nssv2598218,nssv2598243,nssv2598226,nssv2599193,nssv2599220,nssv2599187,nssv2598222,nssv2599181,nssv2598245,nssv2599184,nssv2599214,nssv2599199,nssv2598227,nssv2598253,nssv2598231,nssv2599197,nssv2599213,nssv2599185,nssv2598220,nssv2598239,nssv2598224,nssv2599205,nssv2598235,nssv2598247,nssv2599208,nssv2598252,nssv2598217,nssv2598255,nssv2599215,nssv2599203,nssv2599227,nssv2599180,nssv2598229,nssv2599200,nssv2599209,nssv2599206,nssv2599207,nssv2598248,nssv2599216,nssv2599204,nssv2598234,nssv2599228,nssv2599211,nssv2599196,nssv2598219,nssv2599202,nssv2598238,nssv2599182,nssv2598228,nssv2599186,nssv2598223,nssv2598249,nssv2599210,nssv2598236,nssv2598241,nssv2598240,nssv2598215,nssv2599222,nssv2598216,nssv2599191,nssv2599212,nssv2599201,nssv2599226,nssv2598213,nssv2598244,nssv2599198,nssv2598232,nssv2599218,nssv2599219,nssv2599188,nssv2598242,nssv2599189,nssv2598237,nssv2599217,nssv2598233,nssv2599221,nssv2598221,nssv2599195,nssv2599224,nssv2599183,nssv2598214,nssv2599225,nssv2598250,nssv2599194,nssv2598246,nssv2598251 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946968 1 146695029 146695744 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599311,nssv2599300,nssv2599272,nssv2599271,nssv2599256,nssv2599290,nssv2599273,nssv2599264,nssv2599260,nssv2599277,nssv2599246,nssv2599229,nssv2599247,nssv2599308,nssv2599262,nssv2599279,nssv2599250,nssv2599287,nssv2599265,nssv2599309,nssv2599249,nssv2599238,nssv2599248,nssv2599241,nssv2599233,nssv2599307,nssv2599232,nssv2599280,nssv2599266,nssv2599286,nssv2599243,nssv2599234,nssv2599253,nssv2599289,nssv2599261,nssv2599291,nssv2599316,nssv2599282,nssv2599318,nssv2599295,nssv2599312,nssv2599275,nssv2599245,nssv2599305,nssv2599242,nssv2599283,nssv2599257,nssv2599276,nssv2599315,nssv2599292,nssv2599269,nssv2599235,nssv2599270,nssv2599298,nssv2599240,nssv2599274,nssv2599236,nssv2599296,nssv2599314,nssv2599297,nssv2599251,nssv2599278,nssv2599320,nssv2599294,nssv2599259,nssv2599267,nssv2599239,nssv2599288,nssv2599255,nssv2599304,nssv2599317,nssv2599231,nssv2599263,nssv2599299,nssv2599319,nssv2599284,nssv2599244,nssv2599302,nssv2599313,nssv2599285,nssv2599254,nssv2599310,nssv2599252,nssv2599306,nssv2599237,nssv2599301,nssv2599258,nssv2599293,nssv2599230,nssv2599303,nssv2599268,nssv2599281 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946969 1 146697044 146713743 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599323,nssv2599365,nssv2599335,nssv2599389,nssv2599391,nssv2599386,nssv2599400,nssv2599382,nssv2599395,nssv2599373,nssv2599328,nssv2599377,nssv2599352,nssv2599356,nssv2599341,nssv2599344,nssv2599349,nssv2599357,nssv2599345,nssv2599374,nssv2599336,nssv2599321,nssv2599340,nssv2599379,nssv2599324,nssv2599364,nssv2599399,nssv2599348,nssv2599334,nssv2599369,nssv2599396,nssv2599378,nssv2599322,nssv2599372,nssv2599393,nssv2599375,nssv2599337,nssv2599366,nssv2599353,nssv2599371,nssv2599342,nssv2599355,nssv2599338,nssv2599367,nssv2599346,nssv2599354,nssv2599394,nssv2599347,nssv2599326,nssv2599390,nssv2599332,nssv2599363,nssv2599330,nssv2599388,nssv2599398,nssv2599361,nssv2599333,nssv2599387,nssv2599350,nssv2599359,nssv2599392,nssv2599362,nssv2599325,nssv2599370,nssv2599339,nssv2599351,nssv2599327,nssv2599360,nssv2599343,nssv2599368,nssv2599329,nssv2599385,nssv2599331,nssv2599381,nssv2599397,nssv2599380,nssv2599383,nssv2599384,nssv2599376,nssv2599358 M 97 10 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3415664 1 146708052 146714050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691969 M 185 1 0 LOC101929780,NBPF10,NBPF14,NBPF8,NBPF9 NA19239 nsv946970 1 146713743 146728138 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599408,nssv2599409,nssv2599407,nssv2599401,nssv2599403,nssv2599406,nssv2599404,nssv2599402,nssv2599411,nssv2599405,nssv2599410 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946338 1 146778138 146793241 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793123,nssv1793168,nssv1793127,nssv1793805,nssv1793816,nssv1793155,nssv1793150,nssv1793165,nssv1793811,nssv1793172,nssv1793817,nssv1793154,nssv1793130,nssv1793169,nssv1793136,nssv1793162,nssv1793124,nssv1793175,nssv1793137,nssv1793182,nssv1793140,nssv1793170,nssv1793126,nssv1793803,nssv1793815,nssv1793157,nssv1793125,nssv1793164,nssv1793153,nssv1793161,nssv1793134,nssv1793178,nssv1793151,nssv1793163,nssv1793128,nssv1793174,nssv1793809,nssv1793171,nssv1793141,nssv1793173,nssv1793808,nssv1793152,nssv1793147,nssv1793149,nssv1793129,nssv1793166,nssv1793133,nssv1793801,nssv1793132,nssv1793145,nssv1793812,nssv1793159,nssv1793143,nssv1793800,nssv1793810,nssv1793181,nssv1793146,nssv1793158,nssv1793813,nssv1793807,nssv1793144,nssv1793167,nssv1793135,nssv1793176,nssv1793131,nssv1793179,nssv1793138,nssv1793183,nssv1793142,nssv1793148,nssv1793139,nssv1793802,nssv1793814,nssv1793122,nssv1793160,nssv1793806,nssv1793804,nssv1793156,nssv1793177,nssv1793180 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv441713 1 146780429 147056085 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1656757,nssv1656755,nssv1656753,nssv1656759,nssv1656754,nssv1656756,nssv1656758 M 270 2 5 LOC101929780,NBPF15,NBPF16 NA07034,NA12801,NA18594,NA18621,NA18635,NA18976,NA18997 nsv508604 1 146789479 147719342 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622776 M 4 0 1 FCGR1C,LOC101929780,LOC388692,LOC645166,NBPF15,NBPF16,NBPF23 NA18994 dgv17n82 1 146793241 146805399 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946971,nsv946339 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3351503 1 146795752 146796350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691970 M 185 1 0 LOC101929780 NA12891 nsv1011311 1 146797048 147017157 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488701,nssv3495938,nssv3500691,nssv3702120 M 29084 3 1 LOC101929780,NBPF15,NBPF16 nsv1007964 1 146797048 147182801 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498522,nssv3702121 M 29084 0 2 LOC101929780,NBPF15,NBPF16 nsv1004217 1 146797048 147215814 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702122 M 29084 1 0 LOC101929780,LOC645166,NBPF15,NBPF16 nsv1013451 1 146797048 147220608 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702123,nssv3702125,nssv3702124,nssv3702126,nssv3501150,nssv3498288,nssv3496343,nssv3488521,nssv3496474,nssv3502736,nssv3488999,nssv3485606 M 29084 7 5 LOC101929780,LOC645166,NBPF15,NBPF16 dgv339n100 1 146797048 147385799 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014856,nsv1002486,nsv1006658,nsv1011228,nsv1003644,nsv1006535,nsv1009497,nsv1012263,nsv1000996,nsv999811,nsv1008325,nsv1007088,nsv1010607,nsv1012015,nsv1014461 M 29084 16 0 LOC101929780,LOC645166,NBPF15,NBPF16 dgv340n100 1 146797048 147545083 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002106,nsv1004935,nsv1003391,nsv1012363,nsv997540,nsv1005343,nsv1004568,nsv1003468,nsv1009234,nsv1009894,nsv1006337,nsv998506,nsv1009156,nsv997883 M 29084 0 18 LOC101929780,LOC645166,NBPF15,NBPF16,NBPF23 dgv341n100 1 146797048 147572680 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997773,nsv997367,nsv1004413,nsv1012413,nsv1011083,nsv1007216 M 29084 6 13 LOC101929780,LOC388692,LOC645166,NBPF15,NBPF16,NBPF23 dgv342n100 1 146797048 147689071 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013165,nsv1001275,nsv999690,nsv1009632,nsv1013381,nsv1010136,nsv1008467,nsv1000528 M 29084 9 0 FCGR1C,LOC101929780,LOC388692,LOC645166,NBPF15,NBPF16,NBPF23 dgv343n100 1 146797048 147788452 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014262,nsv1008262,nsv998911,nsv1014632,nsv1012288 M 29084 7 0 FCGR1C,LOC101929780,LOC388692,LOC645166,NBPF15,NBPF16,NBPF23 dgv344n100 1 146797048 147969147 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009142,nsv1010522,nsv1002416,nsv1002012,nsv1010689 M 29084 17 7 FCGR1C,LINC00623,LINC00869,LOC101929780,LOC388692,LOC645166,NBPF15,NBPF16,NBPF23,PPIAL4A,PPIAL4C dgv345n100 1 146797048 148045353 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999009,nsv998732,nsv1006150,nsv1000026,nsv998048,nsv1000461,nsv1007602,nsv1005866,nsv1015067,nsv1003663,nsv1002660 M 29084 20 0 FCGR1A,FCGR1C,HIST2H2BF,LINC00623,LINC00869,LOC101929780,LOC388692,LOC645166,NBPF15,NBPF16,NBPF23,PPIAL4A,PPIAL4C nsv946972 1 146805399 146815000 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599424,nssv2599433,nssv2599427,nssv2599425,nssv2599428,nssv2599426,nssv2599423,nssv2599429,nssv2599431,nssv2599430,nssv2599432 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv436735 1 146808685 146810525 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465809 M 2 1 0 LOC101929780 NA18505 dgv346n100 1 146814404 147788452 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998194,nsv1008329,nsv1007870 M 29084 0 3 FCGR1C,LOC101929780,LOC388692,LOC645166,NBPF15,NBPF16,NBPF23 nsv946340 1 146815000 146946971 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1793999,nssv1793958,nssv1793917,nssv1794008,nssv1793928,nssv1793989,nssv1793934,nssv1793968,nssv1793920,nssv1793984,nssv1793936,nssv1794006,nssv1793996,nssv1793981,nssv1793937,nssv1793965,nssv1793923,nssv1793982,nssv1793994,nssv1793966,nssv1793992,nssv1793962,nssv1793995,nssv1793964,nssv1793924,nssv1793991,nssv1794001,nssv1793979,nssv1793926,nssv1793990,nssv1793930,nssv1794007,nssv1793935,nssv1793954,nssv1793943,nssv1793956,nssv1793944,nssv1793948,nssv1793929,nssv1793983,nssv1793933,nssv1793987,nssv1793940,nssv1794009,nssv1793919,nssv1793963,nssv1793918,nssv1793955,nssv1794000,nssv1793950,nssv1793946,nssv1793967,nssv1793921,nssv1793973,nssv1793993,nssv1793986,nssv1793925,nssv1793971,nssv1793998,nssv1793970,nssv1793932,nssv1793985,nssv1793997,nssv1793960,nssv1793922,nssv1794004,nssv1793939,nssv1793949,nssv1793916,nssv1793938,nssv1793927,nssv1793915,nssv1793931,nssv1793957,nssv1793969,nssv1793988,nssv1794010,nssv1793959,nssv1793942,nssv1793952,nssv1793945,nssv1793951,nssv1793980,nssv1793975,nssv1793974,nssv1793947,nssv1793977,nssv1793976,nssv1793972,nssv1794003,nssv1794011,nssv1793961,nssv1793978,nssv1794002,nssv1793953,nssv1793941,nssv1794005 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv33539 1 146825987 147982309 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101256,essv98280,essv94654,essv98568,essv100936,essv92827,essv95366,essv96764,essv99370,essv99660,essv96191,essv97263 M 51 4 8 FCGR1C,LINC00623,LINC00869,LOC101929780,LOC388692,LOC645166,NBPF15,NBPF16,NBPF23,PPIAL4A,PPIAL4C 21618,21659,21693,21772,21791,21872,21944,22007,22075,22085,22217,22335 nsv946974 1 146832041 146844044 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2599437,nssv2599443,nssv2599438,nssv2599435,nssv2599442,nssv2599439,nssv2599441,nssv2599436,nssv2599445,nssv2599440,nssv2599444 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv469683 1 146838731 147063499 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1674901,nssv1676571,nssv1675139,nssv1672960,nssv1675339,nssv1675907,nssv1675754,nssv1676680,nssv1672063,nssv1675016,nssv1673303,nssv1674024 M 265 0 12 LOC101929780,NBPF15,NBPF16 esv27789 1 146840958 146927363 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17232,esv13862,esv15839,esv19717,esv20433 M 40 10 0 LOC101929780,NBPF15,NBPF16 NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12414,NA12878,NA15510,NA18502 nsv946975 1 146844044 146854556 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600437,nssv2599450,nssv2600415,nssv2599475,nssv2600433,nssv2599451,nssv2600420,nssv2600446,nssv2599482,nssv2599466,nssv2600426,nssv2599464,nssv2600430,nssv2599456,nssv2600416,nssv2599453,nssv2600432,nssv2599474,nssv2600418,nssv2600441,nssv2599480,nssv2599457,nssv2600438,nssv2599478,nssv2600413,nssv2599458,nssv2600425,nssv2599465,nssv2599481,nssv2599452,nssv2600428,nssv2599448,nssv2600412,nssv2599470,nssv2600417,nssv2599477,nssv2600414,nssv2599454,nssv2600419,nssv2600448,nssv2599484,nssv2600443,nssv2599472,nssv2599462,nssv2600431,nssv2600442,nssv2599476,nssv2599467,nssv2600421,nssv2599463,nssv2600434,nssv2600444,nssv2599483,nssv2599459,nssv2600435,nssv2600440,nssv2599485,nssv2599447,nssv2600424,nssv2600449,nssv2600422,nssv2599468,nssv2600439,nssv2600445,nssv2599473,nssv2599460,nssv2599479,nssv2599471,nssv2599487,nssv2599455,nssv2600423,nssv2600447,nssv2599469,nssv2599461,nssv2599446,nssv2599449,nssv2600429,nssv2599486,nssv2600427,nssv2600436 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8236 1 146855328 146861015 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv22418,nssv18084 M 31 1 1 LOC101929780,NBPF15,NBPF16 NA12155,NA18975 nsv946976 1 146855661 146856371 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600462,nssv2600493,nssv2600526,nssv2600484,nssv2600533,nssv2600477,nssv2600521,nssv2600481,nssv2600460,nssv2600515,nssv2600522,nssv2600486,nssv2600529,nssv2600500,nssv2600469,nssv2600506,nssv2600467,nssv2600474,nssv2600468,nssv2600516,nssv2600525,nssv2600450,nssv2600475,nssv2600536,nssv2600453,nssv2600504,nssv2600537,nssv2600485,nssv2600455,nssv2600487,nssv2600472,nssv2600497,nssv2600461,nssv2600495,nssv2600473,nssv2600478,nssv2600482,nssv2600498,nssv2600527,nssv2600520,nssv2600459,nssv2600514,nssv2600528,nssv2600532,nssv2600483,nssv2600488,nssv2600456,nssv2600491,nssv2600524,nssv2600496,nssv2600463,nssv2600519,nssv2600476,nssv2600510,nssv2600470,nssv2600512,nssv2600540,nssv2600508,nssv2600458,nssv2600535,nssv2600471,nssv2600490,nssv2600530,nssv2600501,nssv2600454,nssv2600505,nssv2600538,nssv2600489,nssv2600523,nssv2600502,nssv2600480,nssv2600517,nssv2600464,nssv2600494,nssv2600479,nssv2600499,nssv2600534,nssv2600503,nssv2600466,nssv2600531,nssv2600457,nssv2600511,nssv2600541,nssv2600539,nssv2600452,nssv2600492,nssv2600465,nssv2600513,nssv2600509,nssv2600518,nssv2600507,nssv2600451 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946977 1 146856371 146857722 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600552,nssv2599149,nssv2599173,nssv2599126,nssv2599161,nssv2599151,nssv2600544,nssv2599125,nssv2599115,nssv2599146,nssv2599118,nssv2599113,nssv2599164,nssv2599137,nssv2599111,nssv2599135,nssv2599179,nssv2599159,nssv2599110,nssv2599133,nssv2600553,nssv2600542,nssv2599168,nssv2599117,nssv2600546,nssv2599155,nssv2599169,nssv2599156,nssv2600104,nssv2599138,nssv2600550,nssv2599134,nssv2599162,nssv2599143,nssv2600545,nssv2599174,nssv2600555,nssv2599144,nssv2600547,nssv2599145,nssv2599112,nssv2599170,nssv2599108,nssv2599171,nssv2599122,nssv2599116,nssv2599105,nssv2599120,nssv2600551,nssv2599139,nssv2599165,nssv2600543,nssv2599163,nssv2599158,nssv2599106,nssv2599175,nssv2599104,nssv2599142,nssv2599107,nssv2599140,nssv2599119,nssv2599148,nssv2599121,nssv2599141,nssv2599172,nssv2599152,nssv2599177,nssv2599130,nssv2599167,nssv2599123,nssv2599114,nssv2599153,nssv2599109,nssv2599128,nssv2600549,nssv2599127,nssv2600554,nssv2599131,nssv2599103,nssv2599150,nssv2599160,nssv2599124,nssv2599166,nssv2599132,nssv2600548,nssv2599154,nssv2599176,nssv2599178,nssv2599129,nssv2599157,nssv2599136,nssv2599147 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946978 1 146857722 146859929 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600131,nssv2600176,nssv2600109,nssv2600184,nssv2600134,nssv2600181,nssv2600137,nssv2600153,nssv2600127,nssv2600180,nssv2600130,nssv2600157,nssv2600146,nssv2600165,nssv2600122,nssv2600156,nssv2600194,nssv2600152,nssv2600190,nssv2600160,nssv2600133,nssv2600175,nssv2600139,nssv2600163,nssv2600128,nssv2600166,nssv2600119,nssv2600158,nssv2600141,nssv2600164,nssv2600193,nssv2600144,nssv2600142,nssv2600151,nssv2600145,nssv2600173,nssv2600118,nssv2600179,nssv2600192,nssv2600186,nssv2600196,nssv2600155,nssv2600148,nssv2600117,nssv2600195,nssv2600178,nssv2600112,nssv2600106,nssv2600135,nssv2600174,nssv2600136,nssv2600110,nssv2600126,nssv2600143,nssv2600115,nssv2600140,nssv2600108,nssv2600171,nssv2600113,nssv2600154,nssv2600129,nssv2600150,nssv2600116,nssv2600168,nssv2600138,nssv2600169,nssv2600149,nssv2600147,nssv2600132,nssv2600114,nssv2600187,nssv2600167,nssv2600189,nssv2600162,nssv2600125,nssv2600111,nssv2600121,nssv2600183,nssv2600120,nssv2600177,nssv2600124,nssv2600161,nssv2600191,nssv2600107,nssv2600188,nssv2600172,nssv2600123,nssv2600185,nssv2600105,nssv2600159,nssv2600170,nssv2600182 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946979 1 146859929 146860687 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600207,nssv2600198,nssv2600206,nssv2600197,nssv2600203,nssv2600205,nssv2600200,nssv2600201,nssv2600199,nssv2600202,nssv2600204,nssv2600208 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946980 1 146859929 146861340 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600212,nssv2600263,nssv2600220,nssv2600242,nssv2600219,nssv2600261,nssv2600226,nssv2600266,nssv2600288,nssv2600277,nssv2600229,nssv2600274,nssv2600223,nssv2600278,nssv2600282,nssv2600264,nssv2600214,nssv2600265,nssv2600224,nssv2600239,nssv2600221,nssv2600247,nssv2600225,nssv2600249,nssv2600283,nssv2600276,nssv2600234,nssv2600271,nssv2600228,nssv2600245,nssv2600287,nssv2600267,nssv2600237,nssv2600246,nssv2600233,nssv2600252,nssv2600231,nssv2600257,nssv2600241,nssv2600235,nssv2600284,nssv2600254,nssv2600215,nssv2600232,nssv2600238,nssv2600262,nssv2600227,nssv2600236,nssv2600210,nssv2600244,nssv2600216,nssv2600260,nssv2600218,nssv2600275,nssv2600286,nssv2600243,nssv2600240,nssv2600269,nssv2600217,nssv2600209,nssv2600211,nssv2600253,nssv2600222,nssv2600268,nssv2600285,nssv2600251,nssv2600230,nssv2600255,nssv2600281,nssv2600273,nssv2600280,nssv2600250,nssv2600279,nssv2600259,nssv2600213,nssv2600256,nssv2600270,nssv2600258,nssv2600272,nssv2600248 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946982 1 146861340 146864534 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600297,nssv2600352,nssv2600361,nssv2600354,nssv2600294,nssv2600342,nssv2600306,nssv2600359,nssv2600307,nssv2600313,nssv2600362,nssv2600324,nssv2600368,nssv2600340,nssv2600319,nssv2600356,nssv2600292,nssv2600339,nssv2600298,nssv2600290,nssv2600304,nssv2600327,nssv2600295,nssv2600328,nssv2600367,nssv2600357,nssv2600291,nssv2600333,nssv2600364,nssv2600350,nssv2600363,nssv2600325,nssv2600305,nssv2600351,nssv2600300,nssv2600323,nssv2600310,nssv2600353,nssv2600301,nssv2600347,nssv2600299,nssv2600326,nssv2600296,nssv2600346,nssv2600312,nssv2600348,nssv2600321,nssv2600336,nssv2600311,nssv2600329,nssv2600309,nssv2600317,nssv2600360,nssv2600332,nssv2600322,nssv2600316,nssv2600318,nssv2600337,nssv2600365,nssv2600338,nssv2600369,nssv2600320,nssv2600293,nssv2600335,nssv2600308,nssv2600330,nssv2600303,nssv2600343,nssv2600314,nssv2600334,nssv2600315,nssv2600344,nssv2600366,nssv2600341,nssv2600302,nssv2600331,nssv2600349,nssv2600355,nssv2600345,nssv2600358 M 97 10 0 LOC101929780,NBPF15,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8247 1 146862713 146905456 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25160,nssv19413,nssv18085,nssv17735,nssv19087,nssv18431,nssv21407,nssv22756,nssv22746,nssv26726,nssv19437,nssv20096,nssv18772,nssv20732 M 31 14 0 LOC101929780,NBPF15,NBPF16 NA07029,NA07048,NA10839,NA10847,NA11830,NA12155,NA12872,NA18563,NA18564,NA18942,NA18972,NA18980,NA19007,NA19132 nsv946983 1 146875260 146881223 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600384,nssv2600404,nssv2601366,nssv2601362,nssv2600377,nssv2601354,nssv2600381,nssv2600400,nssv2600402,nssv2600396,nssv2600399,nssv2600408,nssv2600382,nssv2600403,nssv2600378,nssv2601339,nssv2600387,nssv2600393,nssv2600374,nssv2601343,nssv2601368,nssv2601336,nssv2601370,nssv2601347,nssv2600372,nssv2600409,nssv2600394,nssv2600411,nssv2600373,nssv2601363,nssv2600376,nssv2601353,nssv2600380,nssv2601352,nssv2600371,nssv2601358,nssv2600383,nssv2601344,nssv2601372,nssv2601359,nssv2600391,nssv2601360,nssv2600390,nssv2600397,nssv2600379,nssv2600406,nssv2600395,nssv2601345,nssv2601367,nssv2601349,nssv2601365,nssv2600407,nssv2600375,nssv2601351,nssv2600389,nssv2600410,nssv2601373,nssv2601337,nssv2600392,nssv2601340,nssv2601369,nssv2601356,nssv2601364,nssv2601348,nssv2600386,nssv2601357,nssv2600385,nssv2601350,nssv2600401,nssv2601342,nssv2600388,nssv2600370,nssv2601371,nssv2601338,nssv2600398,nssv2601346,nssv2601341,nssv2600405,nssv2601355,nssv2601361 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946984 1 146891772 146910717 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601381,nssv2601374,nssv2601380,nssv2601382,nssv2601383,nssv2601375,nssv2601384,nssv2601378,nssv2601376,nssv2601379,nssv2601377 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1009605 1 146894181 147338762 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487385 M 29084 0 1 LOC101929780,LOC645166,NBPF16 dgv347n100 1 146894181 147572680 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008218,nsv999718,nsv1007064,nsv1006652,nsv1014642,nsv1006627,nsv1009481,nsv998559,nsv1013551,nsv1000638,nsv1006827,nsv1001941,nsv1004461 M 29084 0 15 LOC101929780,LOC388692,LOC645166,NBPF16,NBPF23 esv3331663 1 146899852 146903350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691971 M 185 1 0 LOC101929780 NA12878 nsv946985 1 146911217 146925459 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601390,nssv2601391,nssv2601393,nssv2601395,nssv2601385,nssv2601394,nssv2601386,nssv2601392,nssv2601389,nssv2601387,nssv2601388 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946986 1 146925459 146928282 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601465,nssv2601414,nssv2601473,nssv2601428,nssv2601468,nssv2601432,nssv2601441,nssv2601411,nssv2601461,nssv2601412,nssv2601470,nssv2601429,nssv2601443,nssv2601409,nssv2601431,nssv2601403,nssv2601397,nssv2601419,nssv2601408,nssv2601481,nssv2601458,nssv2601426,nssv2601477,nssv2601433,nssv2601402,nssv2601430,nssv2601463,nssv2601483,nssv2601446,nssv2601406,nssv2601438,nssv2601417,nssv2601462,nssv2601422,nssv2601435,nssv2601404,nssv2601471,nssv2601485,nssv2601464,nssv2601418,nssv2601466,nssv2601437,nssv2601405,nssv2601413,nssv2601450,nssv2601482,nssv2601447,nssv2601416,nssv2601459,nssv2601415,nssv2601474,nssv2601423,nssv2601457,nssv2601436,nssv2601467,nssv2601439,nssv2601434,nssv2601424,nssv2601472,nssv2601421,nssv2601451,nssv2601425,nssv2601442,nssv2601407,nssv2601453,nssv2601479,nssv2601455,nssv2601400,nssv2601452,nssv2601478,nssv2601398,nssv2601169,nssv2601460,nssv2601440,nssv2601445,nssv2601486,nssv2601449,nssv2601420,nssv2601475,nssv2601484,nssv2601401,nssv2601480,nssv2601444,nssv2601399,nssv2601476,nssv2601410,nssv2601454,nssv2601427,nssv2601396,nssv2601448,nssv2601456,nssv2601469 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946987 1 146928282 146935979 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601257,nssv2601224,nssv2601259,nssv2601216,nssv2601212,nssv2601235,nssv2601194,nssv2601249,nssv2601209,nssv2601229,nssv2601185,nssv2601230,nssv2601189,nssv2601222,nssv2601184,nssv2601220,nssv2601252,nssv2601240,nssv2601213,nssv2601243,nssv2601192,nssv2601226,nssv2601199,nssv2601234,nssv2601260,nssv2601246,nssv2601195,nssv2601225,nssv2601180,nssv2601228,nssv2601198,nssv2601236,nssv2601191,nssv2601227,nssv2601186,nssv2601211,nssv2601201,nssv2601248,nssv2601197,nssv2601242,nssv2601203,nssv2601232,nssv2601210,nssv2601231,nssv2601258,nssv2601233,nssv2601176,nssv2601221,nssv2601206,nssv2601214,nssv2601187,nssv2601171,nssv2601253,nssv2601223,nssv2601190,nssv2601261,nssv2601196,nssv2601207,nssv2601254,nssv2601237,nssv2601205,nssv2601245,nssv2601188,nssv2601244,nssv2601179,nssv2601208,nssv2601173,nssv2601238,nssv2601193,nssv2601174,nssv2601177,nssv2601217,nssv2601251,nssv2601204,nssv2601200,nssv2601178,nssv2601256,nssv2601170,nssv2601182,nssv2601175,nssv2601202,nssv2601239,nssv2601172,nssv2601250,nssv2601183,nssv2601218,nssv2601255,nssv2601241,nssv2601247,nssv2601219,nssv2601181,nssv2601215 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946988 1 146935979 146936479 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602269,nssv2602271,nssv2601280,nssv2601330,nssv2601272,nssv2601289,nssv2601263,nssv2601297,nssv2601286,nssv2602277,nssv2601294,nssv2601308,nssv2601291,nssv2601307,nssv2602265,nssv2602267,nssv2601264,nssv2601309,nssv2601293,nssv2601306,nssv2602260,nssv2601262,nssv2601267,nssv2602270,nssv2602262,nssv2601312,nssv2601270,nssv2601317,nssv2601290,nssv2601321,nssv2601335,nssv2601320,nssv2601282,nssv2601326,nssv2602276,nssv2601318,nssv2601333,nssv2601319,nssv2602273,nssv2601315,nssv2601273,nssv2601288,nssv2601287,nssv2601310,nssv2601274,nssv2601331,nssv2601278,nssv2601316,nssv2601268,nssv2601324,nssv2601265,nssv2601295,nssv2602264,nssv2601302,nssv2601332,nssv2601285,nssv2602268,nssv2601298,nssv2601275,nssv2602274,nssv2601269,nssv2601303,nssv2602261,nssv2601299,nssv2601334,nssv2601304,nssv2601279,nssv2601301,nssv2602275,nssv2601292,nssv2602272,nssv2601305,nssv2602263,nssv2601327,nssv2601276,nssv2601322,nssv2601284,nssv2601323,nssv2601271,nssv2601311,nssv2601266,nssv2601296,nssv2601277,nssv2601313,nssv2601281,nssv2601300,nssv2601283,nssv2601314,nssv2602266,nssv2601328,nssv2601325,nssv2601329 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946989 1 146936479 146941821 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602353,nssv2602340,nssv2602285,nssv2602346,nssv2602292,nssv2602317,nssv2602281,nssv2602305,nssv2602282,nssv2602339,nssv2602303,nssv2602329,nssv2602350,nssv2602315,nssv2602295,nssv2602321,nssv2602296,nssv2602343,nssv2602288,nssv2602330,nssv2602365,nssv2602314,nssv2602354,nssv2602324,nssv2602355,nssv2602278,nssv2602289,nssv2602319,nssv2602356,nssv2602363,nssv2602286,nssv2602359,nssv2602302,nssv2602336,nssv2602309,nssv2602301,nssv2602351,nssv2602342,nssv2602368,nssv2602338,nssv2602364,nssv2602308,nssv2602283,nssv2602316,nssv2602291,nssv2602332,nssv2602287,nssv2602327,nssv2602293,nssv2602304,nssv2602284,nssv2602362,nssv2602349,nssv2602325,nssv2602357,nssv2602323,nssv2602297,nssv2602369,nssv2602307,nssv2602344,nssv2602310,nssv2602333,nssv2602306,nssv2602347,nssv2602367,nssv2602328,nssv2602361,nssv2602311,nssv2602298,nssv2602313,nssv2602279,nssv2602335,nssv2602294,nssv2602345,nssv2602360,nssv2602366,nssv2602299,nssv2602334,nssv2602300,nssv2602318,nssv2602290,nssv2602320,nssv2602348,nssv2602312,nssv2602352,nssv2602337,nssv2602280,nssv2602326,nssv2602341,nssv2602331,nssv2602322,nssv2602358 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946990 1 146941821 146943492 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602457,nssv2602438,nssv2602388,nssv2602404,nssv2602383,nssv2602454,nssv2602452,nssv2602410,nssv2602379,nssv2602397,nssv2602440,nssv2602426,nssv2602447,nssv2602403,nssv2602399,nssv2602407,nssv2602453,nssv2602432,nssv2602390,nssv2602393,nssv2602445,nssv2602420,nssv2602460,nssv2602417,nssv2602441,nssv2602406,nssv2602443,nssv2602412,nssv2602392,nssv2602409,nssv2602374,nssv2602421,nssv2602386,nssv2602434,nssv2602444,nssv2602416,nssv2602449,nssv2602423,nssv2602389,nssv2602455,nssv2602381,nssv2602431,nssv2602385,nssv2602405,nssv2602459,nssv2602436,nssv2602446,nssv2602451,nssv2602401,nssv2602396,nssv2602378,nssv2602425,nssv2602377,nssv2602414,nssv2602375,nssv2602424,nssv2602391,nssv2602430,nssv2602395,nssv2602418,nssv2602448,nssv2602428,nssv2602380,nssv2602415,nssv2602442,nssv2602422,nssv2602384,nssv2602450,nssv2602373,nssv2602458,nssv2602387,nssv2602419,nssv2602456,nssv2602413,nssv2602382,nssv2602370,nssv2602376,nssv2602408,nssv2602398,nssv2602433,nssv2602394,nssv2602435,nssv2602372,nssv2602400,nssv2602371,nssv2602439,nssv2602402,nssv2602437,nssv2602411,nssv2602429,nssv2602427 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946991 1 146943492 146944680 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602474,nssv2602523,nssv2602548,nssv2602487,nssv2602489,nssv2602545,nssv2602535,nssv2602484,nssv2602464,nssv2602498,nssv2602534,nssv2602527,nssv2602492,nssv2602499,nssv2602478,nssv2602496,nssv2602485,nssv2602505,nssv2602531,nssv2602497,nssv2602539,nssv2602500,nssv2602462,nssv2602501,nssv2602486,nssv2602528,nssv2602544,nssv2602552,nssv2602482,nssv2602461,nssv2602465,nssv2602503,nssv2602551,nssv2602521,nssv2602493,nssv2602524,nssv2602472,nssv2602522,nssv2602470,nssv2602509,nssv2602468,nssv2602508,nssv2602466,nssv2602506,nssv2602532,nssv2602546,nssv2602469,nssv2602511,nssv2602537,nssv2602494,nssv2602481,nssv2602526,nssv2602479,nssv2602491,nssv2602463,nssv2602514,nssv2602483,nssv2602515,nssv2602540,nssv2602518,nssv2602533,nssv2602502,nssv2602538,nssv2602541,nssv2602476,nssv2602517,nssv2602477,nssv2602542,nssv2602550,nssv2602530,nssv2602471,nssv2602520,nssv2602547,nssv2602549,nssv2602467,nssv2602516,nssv2602536,nssv2602504,nssv2602473,nssv2602495,nssv2602490,nssv2602512,nssv2602543,nssv2602488,nssv2602475,nssv2602529,nssv2602480,nssv2602513,nssv2602525,nssv2602510,nssv2602519,nssv2602507 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946992 1 146944680 146946971 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603506,nssv2603537,nssv2603501,nssv2602557,nssv2600877,nssv2600865,nssv2603499,nssv2603518,nssv2603494,nssv2603540,nssv2603496,nssv2603532,nssv2603498,nssv2603536,nssv2603507,nssv2603523,nssv2603516,nssv2603533,nssv2603512,nssv2603538,nssv2602555,nssv2603547,nssv2603509,nssv2603541,nssv2603497,nssv2603515,nssv2600871,nssv2603551,nssv2600880,nssv2602554,nssv2603519,nssv2603548,nssv2600878,nssv2603511,nssv2603505,nssv2602558,nssv2603508,nssv2603528,nssv2602566,nssv2600870,nssv2602565,nssv2603546,nssv2603502,nssv2603526,nssv2602560,nssv2603527,nssv2603495,nssv2603544,nssv2603504,nssv2600866,nssv2603493,nssv2602564,nssv2603492,nssv2603525,nssv2600872,nssv2603522,nssv2603500,nssv2603530,nssv2602556,nssv2603529,nssv2602559,nssv2603535,nssv2603517,nssv2603524,nssv2600873,nssv2603514,nssv2602563,nssv2603545,nssv2603520,nssv2600867,nssv2602567,nssv2600869,nssv2602562,nssv2603543,nssv2600876,nssv2602561,nssv2603513,nssv2603521,nssv2600874,nssv2602553,nssv2600875,nssv2603531,nssv2600879,nssv2603549,nssv2603503,nssv2603539,nssv2603510,nssv2603534,nssv2600868,nssv2603550,nssv2600881,nssv2603542 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946341 1 146946971 146951113 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794017,nssv1794391,nssv1794341,nssv1794349,nssv1794393,nssv1794359,nssv1794343,nssv1794381,nssv2600891,nssv1794376,nssv2600888,nssv1794366,nssv1794330,nssv1794354,nssv1794339,nssv1794387,nssv1794392,nssv1794385,nssv1794395,nssv1794352,nssv1794401,nssv1794367,nssv1794399,nssv1794358,nssv2600889,nssv1794379,nssv1794331,nssv2600883,nssv1794016,nssv1794382,nssv1794340,nssv1794356,nssv1794015,nssv1794348,nssv1794332,nssv1794389,nssv1794336,nssv1794373,nssv1794334,nssv1794360,nssv1794350,nssv1794388,nssv1794342,nssv1794384,nssv2600884,nssv1794372,nssv1794353,nssv1794375,nssv1794347,nssv1794374,nssv1794351,nssv1794345,nssv1794013,nssv1794365,nssv1794333,nssv1794380,nssv1794337,nssv1794386,nssv1794014,nssv1794368,nssv1794400,nssv1794383,nssv1794344,nssv1794012,nssv1794396,nssv1794378,nssv1794346,nssv1794390,nssv1794335,nssv2600885,nssv1794328,nssv1794369,nssv1794397,nssv2600890,nssv1794394,nssv1794377,nssv1794338,nssv2600893,nssv1794329,nssv1794361,nssv1794398,nssv2600892,nssv2600887,nssv2600882,nssv2600886,nssv1794362,nssv1794364,nssv1794363,nssv1794371,nssv1794357,nssv1794355,nssv1794370 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946342 1 147000613 147060169 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794407,nssv1795465,nssv1794404,nssv1795474,nssv1795436,nssv1795440,nssv1795499,nssv1795444,nssv1795491,nssv1795483,nssv1795443,nssv1795437,nssv1795435,nssv1795490,nssv1795433,nssv1795460,nssv1795494,nssv1795464,nssv1794414,nssv1794402,nssv1795497,nssv1795487,nssv1795495,nssv1795505,nssv1795500,nssv1795441,nssv1794406,nssv1795466,nssv1795430,nssv1795457,nssv1795432,nssv1795503,nssv1795431,nssv1795472,nssv1794405,nssv1795488,nssv1794412,nssv1795485,nssv1794410,nssv1795463,nssv1794409,nssv1795508,nssv1795496,nssv1795461,nssv1794403,nssv1795509,nssv1795428,nssv1795453,nssv1795434,nssv1795469,nssv1794408,nssv1795462,nssv1795493,nssv1795455,nssv1794413,nssv1795486,nssv1795442,nssv1795456,nssv1795439,nssv1795446,nssv1795429,nssv1795468,nssv1795438,nssv1795454,nssv1794415,nssv1795476,nssv1795445,nssv1795507,nssv1794411,nssv1795458,nssv1795492,nssv1795510,nssv1795498,nssv1795451,nssv1795471,nssv1795447,nssv1795477,nssv1795506,nssv1795478,nssv1795484,nssv1795501,nssv1795489,nssv1795473,nssv1795502,nssv1795452,nssv1795504,nssv1795479,nssv1795480,nssv1795470,nssv1795481,nssv1795459,nssv1795449,nssv1795467,nssv1795482,nssv1795448,nssv1795450,nssv1795475 M 97 10 0 LOC101929780,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv22150 1 147004580 147090322 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15570,esv10593,esv12320,esv19062 M 40 9 0 LOC101929780,NBPF16 NA11894,NA11931,NA11995,NA12004,NA12006,NA12414,NA12878,NA18502,NA18907 nsv946993 1 147006190 147016407 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600972,nssv2600963,nssv2600923,nssv2600937,nssv2600908,nssv2600956,nssv2600895,nssv2600959,nssv2600926,nssv2600955,nssv2600900,nssv2600944,nssv2600909,nssv2600947,nssv2600925,nssv2600930,nssv2600973,nssv2600933,nssv2600901,nssv2600931,nssv2600899,nssv2600940,nssv2600896,nssv2600928,nssv2600903,nssv2600941,nssv2600915,nssv2600929,nssv2600902,nssv2600943,nssv2600911,nssv2600949,nssv2600966,nssv2600942,nssv2600970,nssv2600894,nssv2600907,nssv2600952,nssv2600965,nssv2600948,nssv2600968,nssv2600936,nssv2600918,nssv2600946,nssv2600912,nssv2600958,nssv2600910,nssv2600954,nssv2600916,nssv2600935,nssv2600905,nssv2600927,nssv2600914,nssv2600957,nssv2600922,nssv2600962,nssv2600913,nssv2600945,nssv2600971,nssv2600953,nssv2600904,nssv2600961,nssv2600969,nssv2600960,nssv2600897,nssv2600934,nssv2600898,nssv2600939,nssv2600919,nssv2600938,nssv2600964,nssv2600951,nssv2600967,nssv2600917,nssv2600906,nssv2600920,nssv2600932,nssv2600924,nssv2600921,nssv2600950 M 97 10 0 LOC101929780,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv348n100 1 147014265 147362464 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007297,nsv997537,nsv997728 M 29084 3 0 LOC101929780,LOC645166,NBPF16 dgv349n100 1 147014265 147419014 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002374,nsv1001828,nsv999094 M 29084 0 3 LOC101929780,LOC645166,NBPF16,NBPF23 dgv350n100 1 147014265 147475191 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004320,nsv1011453 M 29084 2 0 LOC101929780,LOC645166,NBPF16,NBPF23 dgv351n100 1 147014265 147572680 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014639,nsv998072,nsv1006147,nsv1012968,nsv999730 M 29084 16 23 LOC101929780,LOC388692,LOC645166,NBPF16,NBPF23 dgv352n100 1 147014265 147603439 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009787,nsv1012233,nsv1010929,nsv1001274,nsv1009929,nsv998560,nsv1007009,nsv1002725,nsv1001368,nsv997645,nsv1007999,nsv1002688 M 29084 0 23 LOC101929780,LOC388692,LOC645166,NBPF16,NBPF23 dgv353n100 1 147014265 147788452 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014908,nsv1011166 M 29084 0 2 FCGR1C,LOC101929780,LOC388692,LOC645166,NBPF16,NBPF23 nsv433349 1 147017157 147217833 CNV gain Cooper_et_al_2008 18776910 SNP array nssv463230 M 9 1 0 LOC101929780,LOC645166,NBPF16 NA19240 nsv8258 1 147017372 147023497 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv18444,nssv23064 M 31 1 1 LOC101929780,NBPF16 NA12155,NA18975 nsv946994 1 147017607 147018321 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600980,nssv2600975,nssv2600984,nssv2600979,nssv2600977,nssv2600982,nssv2600983,nssv2600974,nssv2600976,nssv2600978,nssv2600981,nssv2600985 M 97 10 0 LOC101929780,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv18n82 1 147017607 147020270 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv946995,nsv946996 M 97 10 0 LOC101929780,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946997 1 147020270 147021784 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601713,nssv2601761,nssv2601706,nssv2601756,nssv2601705,nssv2601730,nssv2601771,nssv2601749,nssv2601714,nssv2601759,nssv2601777,nssv2601727,nssv2601695,nssv2601750,nssv2601722,nssv2601724,nssv2601726,nssv2601755,nssv2601778,nssv2601752,nssv2601723,nssv2601731,nssv2601708,nssv2601775,nssv2601773,nssv2601774,nssv2601772,nssv2601762,nssv2601781,nssv2601748,nssv2601770,nssv2601783,nssv2601725,nssv2601763,nssv2601785,nssv2601744,nssv2601707,nssv2601745,nssv2601715,nssv2601743,nssv2601765,nssv2601758,nssv2601699,nssv2601733,nssv2601704,nssv2601746,nssv2601768,nssv2601740,nssv2601712,nssv2601735,nssv2601782,nssv2601760,nssv2601697,nssv2601736,nssv2601718,nssv2601729,nssv2601700,nssv2601738,nssv2601784,nssv2601739,nssv2601701,nssv2601757,nssv2601766,nssv2601754,nssv2601698,nssv2601721,nssv2601716,nssv2601694,nssv2601703,nssv2601734,nssv2601767,nssv2601747,nssv2601696,nssv2601780,nssv2601719,nssv2601776,nssv2601709,nssv2601717,nssv2601711,nssv2601741,nssv2601710,nssv2601728,nssv2601769,nssv2601753,nssv2601702,nssv2601742,nssv2601764,nssv2601732,nssv2601737,nssv2601720,nssv2601779,nssv2601751 M 97 10 0 LOC101929780,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946998 1 147021784 147023195 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601797,nssv2601786,nssv2601794,nssv2601792,nssv2601793,nssv2601787,nssv2601796,nssv2601795,nssv2601789,nssv2601791,nssv2601790,nssv2601788 M 97 10 0 LOC101929780,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946999 1 147021784 147028068 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601806,nssv2601859,nssv2601823,nssv2601840,nssv2601808,nssv2601860,nssv2601874,nssv2601847,nssv2601801,nssv2601838,nssv2601868,nssv2601836,nssv2601811,nssv2601848,nssv2601830,nssv2601846,nssv2601873,nssv2601835,nssv2601800,nssv2601821,nssv2601829,nssv2601837,nssv2601818,nssv2601858,nssv2601870,nssv2601857,nssv2601877,nssv2601862,nssv2601813,nssv2601839,nssv2601799,nssv2601853,nssv2601817,nssv2601849,nssv2601826,nssv2601844,nssv2601875,nssv2601798,nssv2601827,nssv2601841,nssv2601805,nssv2601864,nssv2601803,nssv2601842,nssv2601871,nssv2601833,nssv2601872,nssv2601867,nssv2601822,nssv2601834,nssv2601804,nssv2601828,nssv2601876,nssv2601863,nssv2601819,nssv2601856,nssv2601816,nssv2601832,nssv2601814,nssv2601850,nssv2601802,nssv2601825,nssv2601869,nssv2601866,nssv2601820,nssv2601865,nssv2601809,nssv2601855,nssv2601810,nssv2601845,nssv2601812,nssv2601824,nssv2601815,nssv2601854,nssv2601807,nssv2601852,nssv2601843,nssv2601831,nssv2601861,nssv2601851 M 97 10 0 LOC101929780,NBPF16 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8269 1 147024757 147067849 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21767,nssv18761,nssv21062,nssv19417,nssv25440,nssv19743,nssv23074,nssv19767,nssv19102,nssv18065,nssv18445,nssv26866,nssv23374,nssv20426 M 31 14 0 LOC101929780,NBPF16 NA07029,NA07048,NA10839,NA10847,NA11830,NA12155,NA12872,NA18563,NA18564,NA18942,NA18972,NA18980,NA19007,NA19132 nsv947000 1 147049971 147072104 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601885,nssv2601883,nssv2601888,nssv2601886,nssv2601884,nssv2601878,nssv2601880,nssv2601879,nssv2601887,nssv2601882,nssv2601881 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946343 1 147062008 147125836 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795533,nssv1795572,nssv1795516,nssv1795547,nssv1795588,nssv1795567,nssv1795542,nssv1795587,nssv1795519,nssv1795556,nssv1795524,nssv1795586,nssv1795532,nssv1795584,nssv1795596,nssv1795549,nssv1795591,nssv1795580,nssv1795592,nssv1795511,nssv1795527,nssv1795561,nssv1795514,nssv1795564,nssv1795597,nssv1795576,nssv1795515,nssv1795546,nssv1795528,nssv1795602,nssv1795536,nssv1795538,nssv1795594,nssv1795562,nssv1795540,nssv1795583,nssv1795512,nssv1795600,nssv1795593,nssv1795569,nssv1795590,nssv1795534,nssv1795520,nssv1795537,nssv1795521,nssv1795605,nssv1795589,nssv1795566,nssv1795517,nssv1795563,nssv1795518,nssv1795606,nssv1795525,nssv1795554,nssv1795539,nssv1795582,nssv1795513,nssv1795560,nssv1795523,nssv1795543,nssv1795526,nssv1795565,nssv1795535,nssv1795541,nssv1795530,nssv1795550,nssv1795522,nssv1795598,nssv1795531,nssv1795568,nssv1795595,nssv1795555,nssv1795529,nssv1795585,nssv1795552,nssv1795553,nssv1795557,nssv1795559,nssv1795573,nssv1795603,nssv1795571,nssv1795599,nssv1795581,nssv1795545,nssv1795551,nssv1795575,nssv1795607,nssv1795604,nssv1795548,nssv1795544,nssv1795570,nssv1795574,nssv1795558,nssv1795577,nssv1795579,nssv1795601,nssv1795578 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831459 1 147066269 147215140 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1449939 M 95 1 0 LOC101929780,LOC645166 nsv947001 1 147075580 147090174 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601897,nssv2601892,nssv2601890,nssv2601896,nssv2601894,nssv2601899,nssv2601893,nssv2601891,nssv2601889,nssv2601898,nssv2601895 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947002 1 147090174 147095680 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601951,nssv2601932,nssv2601934,nssv2601928,nssv2601900,nssv2602896,nssv2601950,nssv2602907,nssv2601949,nssv2601907,nssv2601937,nssv2602911,nssv2601935,nssv2601915,nssv2602891,nssv2601912,nssv2601943,nssv2601903,nssv2602886,nssv2602900,nssv2601930,nssv2601929,nssv2602889,nssv2601911,nssv2602893,nssv2601919,nssv2602892,nssv2602899,nssv2601933,nssv2601906,nssv2601940,nssv2601922,nssv2601941,nssv2601921,nssv2602879,nssv2601916,nssv2602890,nssv2601920,nssv2602909,nssv2601904,nssv2602876,nssv2602914,nssv2602888,nssv2601902,nssv2601923,nssv2602903,nssv2602884,nssv2602913,nssv2602881,nssv2601908,nssv2602880,nssv2602902,nssv2602877,nssv2601925,nssv2601942,nssv2602894,nssv2601938,nssv2601910,nssv2602885,nssv2601913,nssv2602908,nssv2602901,nssv2602905,nssv2601905,nssv2602883,nssv2601931,nssv2602887,nssv2602910,nssv2601945,nssv2602895,nssv2601926,nssv2602898,nssv2601948,nssv2601924,nssv2601944,nssv2601901,nssv2602882,nssv2601918,nssv2602912,nssv2602897,nssv2602878,nssv2601917,nssv2601939,nssv2601909,nssv2602904,nssv2601914,nssv2601946,nssv2602906,nssv2601927,nssv2601947,nssv2601936 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547685 1 147090417 147331145 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723091 M 17421 1 0 LOC101929780,LOC645166 nsv947004 1 147095680 147097930 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602918,nssv2600585,nssv2600602,nssv2600570,nssv2602937,nssv2600578,nssv2602920,nssv2600583,nssv2600615,nssv2600558,nssv2602930,nssv2600612,nssv2600614,nssv2600572,nssv2602922,nssv2600579,nssv2602933,nssv2600577,nssv2600611,nssv2600562,nssv2602934,nssv2600575,nssv2600564,nssv2600582,nssv2602936,nssv2602916,nssv2602921,nssv2600580,nssv2602929,nssv2600598,nssv2602923,nssv2600565,nssv2600603,nssv2600573,nssv2602935,nssv2600613,nssv2602931,nssv2600588,nssv2602917,nssv2600576,nssv2600606,nssv2600599,nssv2600622,nssv2600594,nssv2602938,nssv2600592,nssv2600609,nssv2600569,nssv2602932,nssv2600587,nssv2600605,nssv2600586,nssv2600618,nssv2600568,nssv2600608,nssv2600571,nssv2600621,nssv2600581,nssv2600610,nssv2600590,nssv2602927,nssv2600601,nssv2600556,nssv2600597,nssv2600563,nssv2600600,nssv2602925,nssv2600566,nssv2600604,nssv2600620,nssv2602919,nssv2600617,nssv2600557,nssv2602939,nssv2602926,nssv2600616,nssv2600561,nssv2600559,nssv2600607,nssv2600584,nssv2602924,nssv2600596,nssv2600560,nssv2600593,nssv2600619,nssv2600567,nssv2602928,nssv2600591,nssv2600574,nssv2600595,nssv2600589 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947005 1 147097930 147098430 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600627,nssv2600665,nssv2600696,nssv2600689,nssv2600655,nssv2600663,nssv2600646,nssv2600647,nssv2600645,nssv2600666,nssv2600642,nssv2600654,nssv2600637,nssv2600685,nssv2600656,nssv2600661,nssv2600633,nssv2600688,nssv2600638,nssv2600673,nssv2600641,nssv2600658,nssv2600648,nssv2600674,nssv2600699,nssv2600657,nssv2600652,nssv2600679,nssv2600695,nssv2600671,nssv2600694,nssv2600662,nssv2600639,nssv2600680,nssv2600698,nssv2600683,nssv2600640,nssv2600692,nssv2600636,nssv2600672,nssv2600630,nssv2600659,nssv2600701,nssv2600690,nssv2600649,nssv2600664,nssv2600628,nssv2600668,nssv2600629,nssv2600675,nssv2600700,nssv2600669,nssv2600697,nssv2600676,nssv2600632,nssv2600677,nssv2600634,nssv2600667,nssv2600631,nssv2600682,nssv2600643,nssv2600650,nssv2600626,nssv2600624,nssv2600653,nssv2600623,nssv2600702,nssv2600678,nssv2600635,nssv2600684,nssv2600625,nssv2600681,nssv2600703,nssv2600691,nssv2600644,nssv2600651,nssv2600693,nssv2600687,nssv2600670,nssv2600660,nssv2600686 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947006 1 147097930 147098930 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2600711,nssv2600705,nssv2600706,nssv2600704,nssv2600707,nssv2600709,nssv2600710,nssv2600708,nssv2600714,nssv2600712,nssv2600713 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947007 1 147098430 147098930 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601992,nssv2601980,nssv2600716,nssv2601967,nssv2602003,nssv2601954,nssv2602015,nssv2601961,nssv2602004,nssv2601972,nssv2601991,nssv2601970,nssv2601993,nssv2602025,nssv2602002,nssv2602019,nssv2601989,nssv2601979,nssv2602009,nssv2601969,nssv2601974,nssv2602020,nssv2602011,nssv2601965,nssv2601985,nssv2601968,nssv2602013,nssv2600719,nssv2602012,nssv2601956,nssv2602007,nssv2601952,nssv2601995,nssv2601977,nssv2600715,nssv2602024,nssv2601984,nssv2601958,nssv2601988,nssv2600718,nssv2601996,nssv2602027,nssv2602000,nssv2601957,nssv2601994,nssv2601964,nssv2601999,nssv2601960,nssv2601982,nssv2600717,nssv2601978,nssv2602026,nssv2601998,nssv2601959,nssv2602014,nssv2601953,nssv2602006,nssv2601963,nssv2602010,nssv2602022,nssv2602008,nssv2602018,nssv2601990,nssv2601966,nssv2602001,nssv2601976,nssv2601981,nssv2601973,nssv2601983,nssv2601962,nssv2601986,nssv2601955,nssv2601997,nssv2602021,nssv2602016,nssv2602023,nssv2602017,nssv2601987,nssv2601975,nssv2602005,nssv2601971 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947008 1 147098930 147103773 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602071,nssv2602092,nssv2602113,nssv2602039,nssv2602041,nssv2602101,nssv2602118,nssv2602103,nssv2602064,nssv2602106,nssv2602058,nssv2602066,nssv2602067,nssv2602095,nssv2602049,nssv2602096,nssv2602034,nssv2602108,nssv2602115,nssv2602085,nssv2602057,nssv2602074,nssv2602109,nssv2602033,nssv2602047,nssv2602079,nssv2602042,nssv2602088,nssv2602114,nssv2602091,nssv2602060,nssv2602083,nssv2602116,nssv2602100,nssv2602061,nssv2602105,nssv2602054,nssv2602089,nssv2602068,nssv2602084,nssv2602048,nssv2602107,nssv2602112,nssv2602082,nssv2602110,nssv2602036,nssv2602056,nssv2602104,nssv2602044,nssv2602099,nssv2602038,nssv2602087,nssv2602117,nssv2602086,nssv2602050,nssv2602029,nssv2602045,nssv2602065,nssv2602070,nssv2602075,nssv2602031,nssv2602081,nssv2602111,nssv2602080,nssv2602030,nssv2602062,nssv2602059,nssv2602069,nssv2602051,nssv2602097,nssv2602040,nssv2602032,nssv2602046,nssv2602073,nssv2602063,nssv2602077,nssv2602035,nssv2602072,nssv2602055,nssv2602102,nssv2602043,nssv2602078,nssv2602037,nssv2602094,nssv2602052,nssv2602028,nssv2602053,nssv2602076,nssv2602090,nssv2602093,nssv2602119,nssv2602098 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947009 1 147103773 147104615 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602130,nssv2602164,nssv2602163,nssv2602197,nssv2602155,nssv2602167,nssv2602201,nssv2602180,nssv2602150,nssv2602198,nssv2602206,nssv2602175,nssv2602133,nssv2602185,nssv2602138,nssv2602177,nssv2602137,nssv2602181,nssv2602156,nssv2602191,nssv2602144,nssv2602186,nssv2602132,nssv2602125,nssv2602209,nssv2602124,nssv2602149,nssv2602161,nssv2602140,nssv2602195,nssv2602148,nssv2602174,nssv2602207,nssv2602183,nssv2602129,nssv2602178,nssv2602159,nssv2602121,nssv2602160,nssv2602120,nssv2602126,nssv2602168,nssv2602134,nssv2602190,nssv2602136,nssv2602193,nssv2602127,nssv2602192,nssv2602142,nssv2602182,nssv2602153,nssv2602200,nssv2602122,nssv2602188,nssv2602139,nssv2602128,nssv2602162,nssv2602187,nssv2602202,nssv2602131,nssv2602135,nssv2602176,nssv2602210,nssv2602172,nssv2602152,nssv2602184,nssv2602123,nssv2602157,nssv2602145,nssv2602179,nssv2602203,nssv2602154,nssv2602151,nssv2602158,nssv2602208,nssv2602189,nssv2602143,nssv2602171,nssv2602141,nssv2602166,nssv2602147,nssv2602194,nssv2602204,nssv2602173,nssv2602205,nssv2602170,nssv2602146,nssv2602165,nssv2602196,nssv2602199,nssv2602169 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947010 1 147104615 147105456 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602221,nssv2602211,nssv2602220,nssv2602212,nssv2602218,nssv2602216,nssv2602214,nssv2602215,nssv2602217,nssv2602219,nssv2602213 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947011 1 147104615 147106784 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603205,nssv2602238,nssv2603206,nssv2602246,nssv2603184,nssv2602234,nssv2603200,nssv2602237,nssv2603203,nssv2603224,nssv2603193,nssv2603221,nssv2603210,nssv2603222,nssv2603214,nssv2602228,nssv2603196,nssv2602247,nssv2603191,nssv2602223,nssv2602222,nssv2602230,nssv2603197,nssv2602253,nssv2603211,nssv2603219,nssv2603212,nssv2602233,nssv2602248,nssv2602244,nssv2603185,nssv2602240,nssv2603198,nssv2602251,nssv2603192,nssv2603223,nssv2602249,nssv2602254,nssv2603189,nssv2602235,nssv2603199,nssv2602242,nssv2603207,nssv2602229,nssv2603194,nssv2603225,nssv2602257,nssv2602241,nssv2603209,nssv2602227,nssv2602252,nssv2602225,nssv2602259,nssv2603217,nssv2602245,nssv2602239,nssv2603195,nssv2603218,nssv2603204,nssv2602250,nssv2603202,nssv2602232,nssv2602258,nssv2602226,nssv2602255,nssv2602224,nssv2603208,nssv2602243,nssv2603190,nssv2603216,nssv2603187,nssv2603220,nssv2603213,nssv2602236,nssv2603188,nssv2602231,nssv2603186,nssv2602256,nssv2603201,nssv2603215 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947012 1 147105456 147106784 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603235,nssv2603230,nssv2603228,nssv2603231,nssv2603229,nssv2603227,nssv2603233,nssv2603234,nssv2603232,nssv2603237,nssv2603236,nssv2603226 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947013 1 147106784 147113047 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2601555,nssv2601547,nssv2601501,nssv2601539,nssv2601487,nssv2601559,nssv2601488,nssv2601543,nssv2601490,nssv2601529,nssv2603241,nssv2601506,nssv2601566,nssv2601514,nssv2601565,nssv2601527,nssv2601497,nssv2601520,nssv2601504,nssv2601535,nssv2601493,nssv2601564,nssv2601554,nssv2603238,nssv2603239,nssv2601570,nssv2601561,nssv2601509,nssv2601557,nssv2601567,nssv2601503,nssv2601502,nssv2601558,nssv2601521,nssv2601500,nssv2601536,nssv2601510,nssv2601513,nssv2603243,nssv2601517,nssv2603242,nssv2601525,nssv2601549,nssv2601531,nssv2601511,nssv2601542,nssv2601551,nssv2601544,nssv2601494,nssv2601519,nssv2601568,nssv2601534,nssv2601492,nssv2601505,nssv2601495,nssv2601560,nssv2601553,nssv2601530,nssv2601556,nssv2601540,nssv2601569,nssv2601541,nssv2601507,nssv2601515,nssv2601496,nssv2601538,nssv2601562,nssv2601516,nssv2601552,nssv2601524,nssv2601489,nssv2601548,nssv2601491,nssv2601512,nssv2603240,nssv2601518,nssv2601498,nssv2601522,nssv2601508,nssv2601523,nssv2603245,nssv2601537,nssv2601550,nssv2601563,nssv2603244,nssv2601532,nssv2601499,nssv2601545,nssv2601526,nssv2601533,nssv2601528,nssv2601546 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947014 1 147113047 147118006 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602578,nssv2601607,nssv2601603,nssv2601639,nssv2601582,nssv2602583,nssv2602577,nssv2601598,nssv2601596,nssv2601594,nssv2602585,nssv2601620,nssv2601578,nssv2601611,nssv2602569,nssv2601638,nssv2601590,nssv2601626,nssv2601584,nssv2601613,nssv2601585,nssv2601624,nssv2602573,nssv2601608,nssv2601643,nssv2601630,nssv2601576,nssv2601616,nssv2601573,nssv2602580,nssv2601595,nssv2601635,nssv2601593,nssv2601625,nssv2601580,nssv2601640,nssv2601574,nssv2601571,nssv2602571,nssv2602576,nssv2602574,nssv2601633,nssv2601572,nssv2601619,nssv2601592,nssv2602579,nssv2602572,nssv2601636,nssv2601600,nssv2601622,nssv2601642,nssv2601614,nssv2602568,nssv2601623,nssv2602584,nssv2601606,nssv2601581,nssv2601621,nssv2602582,nssv2601618,nssv2602581,nssv2601627,nssv2601591,nssv2601610,nssv2601641,nssv2601601,nssv2601579,nssv2602575,nssv2601583,nssv2601615,nssv2601587,nssv2601629,nssv2601589,nssv2601634,nssv2601588,nssv2601631,nssv2601577,nssv2601628,nssv2601602,nssv2601617,nssv2601575,nssv2601612,nssv2601599,nssv2601632,nssv2602570,nssv2601604,nssv2601586,nssv2601597,nssv2601609,nssv2601637,nssv2601605 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3426106 1 147115184 147115238 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7862086,essv7862088 M 185 2 0 LOC101929780 NA18520,NA19172 esv9583 1 147115262 147116762 CNV loss Ahn_et_al_2009 19470904 Sequencing essv32024 M 1 0 0 LOC101929780 nsv947015 1 147118006 147118506 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602609,nssv2602632,nssv2602604,nssv2602650,nssv2602603,nssv2602640,nssv2602597,nssv2602644,nssv2602662,nssv2602642,nssv2602600,nssv2602624,nssv2602661,nssv2602649,nssv2602606,nssv2602652,nssv2602607,nssv2602655,nssv2602601,nssv2602645,nssv2602612,nssv2602628,nssv2602598,nssv2602586,nssv2602619,nssv2602613,nssv2602664,nssv2602647,nssv2602658,nssv2602610,nssv2602615,nssv2602639,nssv2602590,nssv2602617,nssv2602659,nssv2602656,nssv2602595,nssv2602629,nssv2602594,nssv2602643,nssv2602596,nssv2602635,nssv2602591,nssv2602648,nssv2602608,nssv2602627,nssv2602665,nssv2602633,nssv2602660,nssv2602638,nssv2602605,nssv2602630,nssv2602616,nssv2602621,nssv2602602,nssv2602614,nssv2602663,nssv2602636,nssv2602593,nssv2602587,nssv2602588,nssv2602620,nssv2602589,nssv2602646,nssv2602657,nssv2602651,nssv2602618,nssv2602654,nssv2602611,nssv2602623,nssv2602666,nssv2602625,nssv2602592,nssv2602631,nssv2602599,nssv2602626,nssv2602634,nssv2602653,nssv2602637,nssv2602641,nssv2602622 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947017 1 147118506 147124218 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602696,nssv2602712,nssv2602693,nssv2602668,nssv2602700,nssv2602695,nssv2602745,nssv2602694,nssv2602687,nssv2602731,nssv2602673,nssv2602722,nssv2602690,nssv2602709,nssv2602683,nssv2602726,nssv2602747,nssv2602717,nssv2602685,nssv2602728,nssv2602684,nssv2602721,nssv2602677,nssv2602705,nssv2602682,nssv2602724,nssv2602675,nssv2602714,nssv2602679,nssv2602720,nssv2602678,nssv2602715,nssv2602742,nssv2602708,nssv2602740,nssv2602719,nssv2602697,nssv2602734,nssv2602738,nssv2602698,nssv2602670,nssv2602732,nssv2602739,nssv2602707,nssv2602669,nssv2602704,nssv2602671,nssv2602737,nssv2602699,nssv2602725,nssv2602674,nssv2602711,nssv2602672,nssv2602718,nssv2602743,nssv2602716,nssv2602688,nssv2602735,nssv2602744,nssv2602691,nssv2602741,nssv2602723,nssv2602676,nssv2602703,nssv2602692,nssv2602733,nssv2602689,nssv2602710,nssv2602686,nssv2602706,nssv2602681,nssv2602729,nssv2602680,nssv2602730,nssv2602746,nssv2602713,nssv2602702,nssv2602727,nssv2602701,nssv2602736 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947018 1 147122809 147124218 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602754,nssv2602752,nssv2602751,nssv2602749,nssv2602758,nssv2602759,nssv2602750,nssv2602753,nssv2602755,nssv2602748,nssv2602757,nssv2602756 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947019 1 147124218 147125836 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602792,nssv2602802,nssv2602762,nssv2602814,nssv2602846,nssv2602812,nssv2602780,nssv2602794,nssv2602761,nssv2602844,nssv2602777,nssv2602823,nssv2602835,nssv2602829,nssv2602781,nssv2602807,nssv2602843,nssv2602820,nssv2602768,nssv2602805,nssv2602836,nssv2602786,nssv2602773,nssv2602827,nssv2602767,nssv2602815,nssv2602763,nssv2602813,nssv2602839,nssv2602845,nssv2602791,nssv2602821,nssv2602838,nssv2602800,nssv2602782,nssv2602817,nssv2602779,nssv2602818,nssv2602776,nssv2602811,nssv2602766,nssv2602841,nssv2602785,nssv2602801,nssv2602770,nssv2602828,nssv2602842,nssv2602798,nssv2602832,nssv2602824,nssv2602774,nssv2602796,nssv2602830,nssv2602809,nssv2602775,nssv2602808,nssv2602833,nssv2602787,nssv2602850,nssv2602848,nssv2602771,nssv2602795,nssv2602834,nssv2602797,nssv2602847,nssv2602804,nssv2602765,nssv2602819,nssv2602789,nssv2602816,nssv2602837,nssv2602851,nssv2602788,nssv2602783,nssv2602764,nssv2602825,nssv2602849,nssv2602826,nssv2602784,nssv2602799,nssv2602769,nssv2602840,nssv2602778,nssv2602793,nssv2602831,nssv2602760,nssv2602772,nssv2602803,nssv2602790,nssv2602806,nssv2602810,nssv2602822 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946344 1 147125836 147129898 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795686,nssv1795642,nssv1795613,nssv1795672,nssv2603805,nssv1795643,nssv1795678,nssv1795671,nssv1795639,nssv1795673,nssv1795620,nssv1795676,nssv1795621,nssv1795669,nssv1795630,nssv1795655,nssv2602870,nssv1795653,nssv2602868,nssv1795674,nssv2602864,nssv1795664,nssv2602853,nssv1795644,nssv1795616,nssv1795635,nssv1795629,nssv1795646,nssv1795627,nssv1795608,nssv1795609,nssv1795631,nssv1795682,nssv1795666,nssv2602852,nssv1795661,nssv2603803,nssv1795677,nssv1795681,nssv1795659,nssv1795680,nssv1795634,nssv1795618,nssv1795658,nssv2603806,nssv1795657,nssv1795624,nssv1795651,nssv1795687,nssv1795649,nssv1795626,nssv1795660,nssv2602862,nssv1795663,nssv1795612,nssv1795640,nssv1795625,nssv1795647,nssv2602872,nssv1795662,nssv1795633,nssv1795638,nssv1795684,nssv1795650,nssv2603804,nssv1795668,nssv2602875,nssv1795670,nssv2602858,nssv1795654,nssv2602869,nssv1795648,nssv1795619,nssv1795656,nssv1795615,nssv1795665,nssv1795683,nssv1795641,nssv1795611,nssv1795675,nssv2602867,nssv1795667,nssv2602856,nssv1795645,nssv2603801,nssv1795652,nssv2602865,nssv2603800,nssv2602854,nssv1795614,nssv2602866,nssv2602857,nssv2602871,nssv1795679,nssv2602859,nssv2603802,nssv2602861,nssv1795623,nssv1795622,nssv1795636,nssv2602874,nssv1795632,nssv1795610,nssv1795628,nssv2603807,nssv1795617,nssv2602860,nssv2602855,nssv1795637,nssv1795685,nssv2602873,nssv2602863 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946345 1 147133312 147134000 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796165,nssv1795697,nssv1796183,nssv1795701,nssv1796164,nssv1795699,nssv1795726,nssv1795710,nssv1795733,nssv1796184,nssv1796180,nssv1795695,nssv1796166,nssv1796186,nssv1796173,nssv1795696,nssv1795735,nssv1796191,nssv1796181,nssv1795709,nssv1796162,nssv1795707,nssv1795715,nssv1795708,nssv1796163,nssv1795689,nssv1796174,nssv1795719,nssv1795724,nssv1796187,nssv1795722,nssv1795706,nssv1796168,nssv1795698,nssv1795723,nssv1796193,nssv1796177,nssv1795705,nssv1795711,nssv1795692,nssv1795688,nssv1795713,nssv1795725,nssv1795704,nssv1795714,nssv1795693,nssv1796178,nssv1795694,nssv1796171,nssv1796189,nssv1796176,nssv1795702,nssv1795731,nssv1796192,nssv1796179,nssv1795690,nssv1796172,nssv1795717,nssv1795727,nssv1795712,nssv1795720,nssv1795716,nssv1795718,nssv1796188,nssv1795734,nssv1796185,nssv1796182,nssv1796190,nssv1796170,nssv1795703,nssv1795730,nssv1795700,nssv1796169,nssv1795691,nssv1795721,nssv1796167,nssv1795729,nssv1795728,nssv1795732,nssv1796175 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946348 1 147139275 147163115 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796211,nssv1794943,nssv1796206,nssv1796266,nssv1796278,nssv1796221,nssv1796195,nssv1796227,nssv1796199,nssv1796247,nssv1796205,nssv1796245,nssv1796214,nssv1796229,nssv1796271,nssv1796244,nssv1796277,nssv1794946,nssv1796202,nssv1796237,nssv1796219,nssv1794952,nssv1796215,nssv1796226,nssv1796216,nssv1796263,nssv1796213,nssv1796220,nssv1796203,nssv1796255,nssv1796274,nssv1796268,nssv1796223,nssv1796235,nssv1796212,nssv1796234,nssv1796198,nssv1796260,nssv1796207,nssv1794950,nssv1796280,nssv1796246,nssv1796273,nssv1796261,nssv1796209,nssv1796254,nssv1796210,nssv1796232,nssv1796222,nssv1796265,nssv1796201,nssv1796264,nssv1796204,nssv1796257,nssv1796225,nssv1796248,nssv1796276,nssv1796243,nssv1796208,nssv1796236,nssv1796275,nssv1794944,nssv1796218,nssv1796269,nssv1796200,nssv1796242,nssv1796279,nssv1794945,nssv1796196,nssv1796267,nssv1796197,nssv1796224,nssv1796272,nssv1796240,nssv1796270,nssv1796251,nssv1794949,nssv1796256,nssv1796253,nssv1796217,nssv1796233,nssv1796231,nssv1796238,nssv1794947,nssv1794951,nssv1796252,nssv1796241,nssv1796258,nssv1796239,nssv1796194,nssv1796259,nssv1796250,nssv1796228,nssv1796262,nssv1794948,nssv1796230,nssv1796249 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8280 1 147162107 147170569 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25466 M 31 1 0 LOC101929780 NA19221 nsv946350 1 147163115 147188220 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795008,nssv1794969,nssv1795013,nssv1794966,nssv1795016,nssv1795023,nssv1794998,nssv1794974,nssv1794985,nssv1794975,nssv1795017,nssv1794961,nssv1795010,nssv1794972,nssv1794990,nssv1795025,nssv1794986,nssv1795028,nssv1794991,nssv1795026,nssv1795021,nssv1795029,nssv1795009,nssv1794970,nssv1795018,nssv1795120,nssv1794989,nssv1794962,nssv1795014,nssv1794971,nssv1794987,nssv1794957,nssv1795003,nssv1795024,nssv1794996,nssv1794964,nssv1794983,nssv1795031,nssv1794953,nssv1794968,nssv1795015,nssv1795030,nssv1795011,nssv1795027,nssv1794997,nssv1794956,nssv1795022,nssv1794967,nssv1795012,nssv1794978,nssv1795006,nssv1794960,nssv1795000,nssv1794984,nssv1795005,nssv1794954,nssv1795002,nssv1794958,nssv1794995,nssv1794981,nssv1795020,nssv1794959,nssv1794994,nssv1794973,nssv1794980,nssv1794977,nssv1795019,nssv1794965,nssv1794992,nssv1794955,nssv1794976,nssv1794963,nssv1795001,nssv1794982,nssv1794979,nssv1795007,nssv1794988,nssv1794999,nssv1794993,nssv1795004 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947029 1 147171170 147180278 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604429,nssv2604438,nssv2604428,nssv2604437,nssv2604432,nssv2604434,nssv2604433,nssv2604435,nssv2604436,nssv2604431,nssv2604430 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv354n100 1 147182801 147333761 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010536,nsv1003523,nsv1013054 M 29084 3 0 LOC101929780,LOC645166 dgv355n100 1 147182801 147338762 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999495,nsv1013332,nsv1009242 M 29084 0 13 LOC101929780,LOC645166 dgv356n100 1 147182801 147438362 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997582,nsv1007422,nsv1003131,nsv998603,nsv1008442,nsv1007675 M 29084 0 10 LOC101929780,LOC645166,NBPF23 dgv357n100 1 147182801 147545083 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012347,nsv1014478,nsv1002484,nsv1006175,nsv1011528,nsv1013243,nsv1014254,nsv999916,nsv1007120,nsv1011424,nsv1006204,nsv1000937,nsv1003051,nsv1012471,nsv998264,nsv1006074,nsv1013209,nsv1006114,nsv1002869,nsv1011699,nsv1012426,nsv1004079,nsv1004793,nsv1009883,nsv1009933,nsv1014110,nsv1003218,nsv1008880,nsv1007780,nsv999567,nsv1008922,nsv998356,nsv999265,nsv999857,nsv1010842,nsv998716,nsv1008692 M 29084 0 86 LOC101929780,LOC645166,NBPF23 dgv358n100 1 147182801 147558211 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999592,nsv1003557 M 29084 3 0 LOC101929780,LOC388692,LOC645166,NBPF23 dgv359n100 1 147182801 147606197 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006915,nsv1012999,nsv1014051,nsv1008023,nsv1000801,nsv1012422,nsv1007308,nsv998642,nsv1004064,nsv1000318 M 29084 35 100 LOC101929780,LOC388692,LOC645166,NBPF23 dgv360n100 1 147182801 147703454 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005283,nsv1014725,nsv1003065,nsv1009029 M 29084 0 8 FCGR1C,LOC101929780,LOC388692,LOC645166,NBPF23 dgv361n100 1 147182801 147788452 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004242,nsv1001573,nsv1013356,nsv1003984,nsv1000689 M 29084 7 0 FCGR1C,LOC101929780,LOC388692,LOC645166,NBPF23 dgv362n100 1 147182801 147788452 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001882,nsv1009443,nsv1004031,nsv1013769 M 29084 32 20 FCGR1C,LOC101929780,LOC388692,LOC645166,NBPF23 dgv363n100 1 147182801 147999237 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998336,nsv1001297,nsv1009784,nsv1011012,nsv1009724,nsv1012460,nsv1013333,nsv998334 M 29084 22 32 FCGR1C,LINC00623,LINC00869,LOC101929780,LOC388692,LOC645166,NBPF23,PPIAL4A,PPIAL4C dgv364n100 1 147182801 148045353 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002704,nsv997575,nsv1005198,nsv1002340,nsv1009806,nsv997294,nsv1001844,nsv1007636,nsv1004577,nsv1000267 M 29084 12 0 FCGR1A,FCGR1C,HIST2H2BF,LINC00623,LINC00869,LOC101929780,LOC388692,LOC645166,NBPF23,PPIAL4A,PPIAL4C nsv946352 1 147188220 147198582 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604441,nssv2604439,nssv2604446,nssv2604440,nssv2604445,nssv2604449,nssv2604448,nssv2604443,nssv2604444,nssv2604447,nssv2604442 M 97 10 0 LOC101929780,LOC645166 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946351 1 147188220 147208608 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795137,nssv1795213,nssv1795143,nssv1795161,nssv1795198,nssv1795167,nssv1795126,nssv1795217,nssv1795206,nssv1795160,nssv1795123,nssv1795191,nssv1795129,nssv1795147,nssv1795142,nssv1795181,nssv1795134,nssv1795153,nssv1795140,nssv1795175,nssv1795125,nssv1795179,nssv1795201,nssv1795183,nssv1795207,nssv1795196,nssv1795139,nssv1795176,nssv1795138,nssv1795151,nssv1795203,nssv1795165,nssv1795122,nssv1795177,nssv1795200,nssv1795166,nssv1795136,nssv1795189,nssv1795199,nssv1795178,nssv1795205,nssv1795158,nssv1795133,nssv1795208,nssv1795135,nssv1795186,nssv1795127,nssv1795184,nssv1795152,nssv1795156,nssv1795131,nssv1795185,nssv1795149,nssv1795157,nssv1795128,nssv1795193,nssv1795204,nssv1795169,nssv1795124,nssv1795154,nssv1795150,nssv1795182,nssv1795146,nssv1795211,nssv1795132,nssv1795209,nssv1795202,nssv1795216,nssv1795145,nssv1795159,nssv1795130,nssv1795155,nssv1795141,nssv1795180,nssv1795172,nssv1795171,nssv1795168,nssv1795187,nssv1795174,nssv1795173,nssv1795188,nssv1795170,nssv1795190,nssv1795210,nssv1795164,nssv1795148,nssv1795192,nssv1795194,nssv1795162,nssv1795214,nssv1795195,nssv1795197,nssv1795121,nssv1795215,nssv1795163,nssv1795144,nssv1795212 M 97 10 0 LOC101929780,LOC645166 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8291 1 147189000 147200711 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25725 M 31 1 0 LOC101929780,LOC645166 NA19221 dgv365n100 1 147214322 147526028 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999550,nsv1011501,nsv1012086 M 29084 4 13 LOC101929780,LOC645166,NBPF23 dgv2e213 1 147216799 147526040 CNV loss Mokhtar_et_al_2014 24956385 SNP array esv3584598,esv3584597 M 34 0 2 LOC101929780,LOC645166,NBPF23 1WS,KSF024 nsv946353 1 147270729 147272178 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795290,nssv1795244,nssv1795247,nssv1795269,nssv2604453,nssv1795255,nssv1795240,nssv1795259,nssv1795223,nssv1795264,nssv1795294,nssv1795257,nssv1795288,nssv1795266,nssv1795230,nssv1795283,nssv1795219,nssv1795258,nssv1795231,nssv1795260,nssv1795226,nssv1795250,nssv1795239,nssv1795276,nssv1795292,nssv1795278,nssv1795221,nssv1795280,nssv1795237,nssv1795281,nssv1795220,nssv1795273,nssv1795233,nssv2604450,nssv1795291,nssv2604452,nssv1795234,nssv1795272,nssv1795293,nssv2604459,nssv1795227,nssv2604461,nssv1795228,nssv1795262,nssv1795236,nssv1795248,nssv1795235,nssv1795275,nssv1795222,nssv2604454,nssv1795289,nssv1795263,nssv1795225,nssv1795282,nssv1795249,nssv1795277,nssv1795232,nssv2604456,nssv1795224,nssv1795251,nssv1795246,nssv1795274,nssv1795295,nssv1795245,nssv1795296,nssv1795279,nssv2604460,nssv1795256,nssv1795243,nssv1795286,nssv2604457,nssv1795252,nssv1795242,nssv1795253,nssv2604458,nssv1795268,nssv1795238,nssv1795285,nssv1795297,nssv1795265,nssv1795229,nssv1795287,nssv1795254,nssv1795284,nssv2604451,nssv1795261,nssv1795271,nssv1795270,nssv1795218,nssv1795267,nssv1795241,nssv2604455 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3339521 1 147271052 147278550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691972 M 185 1 0 LOC101929780 NA19240 esv3446179 1 147271052 147289650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691973 M 185 1 0 LOC101929780 NA19238 nsv946355 1 147272178 147276398 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604542,nssv2604506,nssv2604494,nssv2604513,nssv2604539,nssv2604497,nssv2604471,nssv2604517,nssv2604537,nssv2604527,nssv2604475,nssv2604463,nssv2604552,nssv2604493,nssv2604466,nssv2604514,nssv2604468,nssv2604462,nssv2604484,nssv2604495,nssv2604487,nssv2604520,nssv2604476,nssv2604510,nssv2604534,nssv2604516,nssv2604477,nssv2604528,nssv2604535,nssv2604505,nssv2604536,nssv2604508,nssv2604467,nssv2604504,nssv2604483,nssv2604499,nssv2604485,nssv2604496,nssv2604492,nssv2604529,nssv2604541,nssv2604509,nssv2604478,nssv2604501,nssv2604545,nssv2604511,nssv2604540,nssv2604532,nssv2604479,nssv2604515,nssv2604474,nssv2604519,nssv2604470,nssv2604490,nssv2604482,nssv2604518,nssv2604549,nssv2604543,nssv2604550,nssv2604521,nssv2604473,nssv2604553,nssv2604480,nssv2604502,nssv2604491,nssv2604498,nssv2604533,nssv2604523,nssv2604472,nssv2604486,nssv2604464,nssv2604547,nssv2604538,nssv2604507,nssv2604465,nssv2604548,nssv2604481,nssv2604531,nssv2604469,nssv2604546,nssv2604530,nssv2604489,nssv2604551,nssv2604500,nssv2604488,nssv2604524,nssv2604522,nssv2604503,nssv2604525,nssv2604512,nssv2604544,nssv2604526 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946354 1 147272178 147298540 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795313,nssv1795341,nssv1795320,nssv1795340,nssv1795305,nssv1795355,nssv1795375,nssv1795387,nssv1795303,nssv1795374,nssv1795301,nssv1795373,nssv1795379,nssv1795350,nssv1795381,nssv1795389,nssv1795306,nssv1795325,nssv1795327,nssv1795363,nssv1795319,nssv1795393,nssv1795311,nssv1795392,nssv1795323,nssv1795369,nssv1795378,nssv1795391,nssv1795314,nssv1795344,nssv1795384,nssv1795324,nssv1795315,nssv1795356,nssv1795316,nssv1795339,nssv1795317,nssv1795330,nssv1795302,nssv1795346,nssv1795380,nssv1795368,nssv1795300,nssv1795352,nssv1795382,nssv1795337,nssv1795377,nssv1795328,nssv1795308,nssv1795370,nssv1795299,nssv1795353,nssv1795310,nssv1795342,nssv1795376,nssv1795394,nssv1795326,nssv1795358,nssv1795312,nssv1795338,nssv1795304,nssv1795390,nssv1795383,nssv1795360,nssv1795329,nssv1795385,nssv1795322,nssv1795366,nssv1795318,nssv1795335,nssv1795307,nssv1795372,nssv1795309,nssv1795361,nssv1795347,nssv1795331,nssv1795357,nssv1795333,nssv1795362,nssv1795386,nssv1795336,nssv1795332,nssv1795371,nssv1795367,nssv1795348,nssv1795365,nssv1795321,nssv1795359,nssv1795364,nssv1795343,nssv1795354,nssv1795334,nssv1795388,nssv1795298,nssv1795351,nssv1795349,nssv1795345 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547686 1 147272181 147331145 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723092,nssv723093,nssv723094 M 17421 1 2 LOC101929780 dgv536n54 1 147272181 147710728 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547700,nsv547698,nsv547720,nsv547687 M 17421 6 0 FCGR1C,LOC101929780,LOC388692,NBPF23 nsv947030 1 147276398 147277851 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604563,nssv2604565,nssv2604555,nssv2604557,nssv2604556,nssv2604558,nssv2604560,nssv2604561,nssv2604559,nssv2604564,nssv2604554,nssv2604562 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv19n82 1 147276398 147282646 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv947032,nsv947031 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv20n82 1 147282646 147285450 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv947034,nsv947033 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947035 1 147284950 147285450 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602965,nssv2602967,nssv2602966,nssv2602968,nssv2602973,nssv2602964,nssv2602970,nssv2602971,nssv2602972,nssv2602962,nssv2602969,nssv2602963 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947036 1 147285450 147290403 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2602982,nssv2603040,nssv2603005,nssv2603017,nssv2602996,nssv2603030,nssv2602985,nssv2603016,nssv2603006,nssv2603043,nssv2603047,nssv2603033,nssv2602978,nssv2603059,nssv2602980,nssv2603022,nssv2602989,nssv2602974,nssv2603051,nssv2603007,nssv2602991,nssv2603027,nssv2603064,nssv2603025,nssv2602992,nssv2603000,nssv2602999,nssv2603060,nssv2602987,nssv2603028,nssv2603058,nssv2603020,nssv2602983,nssv2603004,nssv2602977,nssv2603055,nssv2603002,nssv2603032,nssv2603053,nssv2603010,nssv2602993,nssv2603056,nssv2602995,nssv2603018,nssv2602981,nssv2603013,nssv2602975,nssv2603035,nssv2602988,nssv2603026,nssv2603062,nssv2603014,nssv2603044,nssv2603038,nssv2602979,nssv2603029,nssv2602994,nssv2603042,nssv2602984,nssv2603011,nssv2602998,nssv2603031,nssv2603057,nssv2603001,nssv2603061,nssv2603037,nssv2603065,nssv2603015,nssv2603049,nssv2603023,nssv2602990,nssv2603008,nssv2603046,nssv2603021,nssv2603045,nssv2603054,nssv2603003,nssv2603019,nssv2603048,nssv2603034,nssv2603050,nssv2603039,nssv2603052,nssv2603024,nssv2602986,nssv2603009,nssv2602976,nssv2603041,nssv2602997,nssv2603063,nssv2603012,nssv2603036 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947037 1 147290403 147298540 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604123,nssv2603101,nssv2603088,nssv2603164,nssv2603085,nssv2603112,nssv2603136,nssv2603072,nssv2603142,nssv2604114,nssv2603146,nssv2603176,nssv2603157,nssv2603092,nssv2604129,nssv2604108,nssv2603158,nssv2603178,nssv2603084,nssv2603174,nssv2603129,nssv2603110,nssv2603130,nssv2603075,nssv2603151,nssv2603079,nssv2603139,nssv2603152,nssv2603074,nssv2603097,nssv2603087,nssv2603071,nssv2603150,nssv2603166,nssv2603076,nssv2603170,nssv2603148,nssv2604112,nssv2603137,nssv2603103,nssv2603144,nssv2603100,nssv2603143,nssv2604113,nssv2603155,nssv2603094,nssv2603070,nssv2603096,nssv2603132,nssv2603115,nssv2603081,nssv2603167,nssv2604128,nssv2603119,nssv2603073,nssv2604115,nssv2603131,nssv2603090,nssv2604120,nssv2604118,nssv2603154,nssv2603089,nssv2603069,nssv2603159,nssv2603145,nssv2603179,nssv2603141,nssv2603091,nssv2603133,nssv2603125,nssv2603077,nssv2603104,nssv2604121,nssv2603173,nssv2603140,nssv2603182,nssv2604125,nssv2604119,nssv2604127,nssv2603114,nssv2603127,nssv2604110,nssv2603128,nssv2603171,nssv2604122,nssv2603109,nssv2603135,nssv2603165,nssv2603138,nssv2603086,nssv2603080,nssv2603106,nssv2603134,nssv2603102,nssv2603147,nssv2603181,nssv2604126,nssv2603160,nssv2604124,nssv2603083,nssv2603107,nssv2603172,nssv2603111,nssv2604117,nssv2603121,nssv2603118,nssv2603078,nssv2603099,nssv2603108,nssv2603149,nssv2603153,nssv2603105,nssv2603168,nssv2603161,nssv2603169,nssv2603180,nssv2603116,nssv2603183,nssv2603175,nssv2604109,nssv2603162,nssv2603066,nssv2603067,nssv2603122,nssv2603093,nssv2603177,nssv2603126,nssv2603120,nssv2604116,nssv2603068,nssv2603124,nssv2603082,nssv2603095,nssv2603098,nssv2603156,nssv2603117,nssv2603163,nssv2603123,nssv2603113,nssv2604111 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv3e213 1 147291426 147512352 CNV loss Mokhtar_et_al_2014 24956385 SNP array esv3584600,esv3584602,esv3584601 M 34 0 3 LOC101929780,NBPF23 2RB,KSM006,KSM008 esv3894189 1 147292384 147856593 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25792902,essv25779316,essv25788953,essv25790783 M 3017 3 1 FCGR1C,LINC00623,LINC00869,LOC101929780,LOC388692,NBPF23,PPIAL4A,PPIAL4C esv2609067 1 147293668 147302162 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5272086 M 1 1 0 LOC101929780 NA18507 dgv537n54 1 147296071 147355702 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547733,nsv547688,nsv547703,nsv547737,nsv547702,nsv547721 M 17421 0 7 LOC101929780 dgv538n54 1 147296071 147468611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547709,nsv547754,nsv547742,nsv547741,nsv547744,nsv547772,nsv547724,nsv547707,nsv547689,nsv547725,nsv547730,nsv547771,nsv547769,nsv547768,nsv547710,nsv547711,nsv547743,nsv547731,nsv547770,nsv547745,nsv547740,nsv547755,nsv547723,nsv547776,nsv547762,nsv547722,nsv547759,nsv547735 M 17421 0 54 LOC101929780,NBPF23 HGDP00007,HGDP00033,HGDP00458,HGDP00530,HGDP00612,HGDP00615,HGDP00718,HGDP00768,HGDP00983,HGDP01375 dgv539n54 1 147296071 147485725 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547690,nsv547691,nsv547693,nsv547712,nsv547694,nsv547692,nsv547746,nsv547757,nsv547756,nsv547760 M 17421 0 24 LOC101929780,NBPF23 HGDP00045,HGDP00607,HGDP00720,HGDP00772,HGDP00881,HGDP01096,HGDP01242 dgv540n54 1 147296071 147512738 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547764,nsv547748,nsv547695,nsv547727,nsv547726,nsv547777,nsv547783,nsv547749,nsv547774,nsv547747,nsv547763,nsv547773,nsv547758,nsv547793 M 17421 0 69 LOC101929780,NBPF23 dgv541n54 1 147296071 147512738 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547714,nsv547713,nsv547696 M 17421 3 50 LOC101929780,NBPF23 dgv542n54 1 147296071 147548553 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547765,nsv547750,nsv547715,nsv547697 M 17421 0 9 LOC101929780,LOC388692,NBPF23 dgv543n54 1 147296071 147666876 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547699,nsv547718,nsv547719 M 17421 3 4 FCGR1C,LOC101929780,LOC388692,NBPF23 nsv946356 1 147298540 147299198 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795424,nssv1795760,nssv2604132,nssv1795427,nssv1795405,nssv1795422,nssv2604137,nssv2604140,nssv1795400,nssv1795761,nssv1795417,nssv1795741,nssv1795773,nssv2604131,nssv1795775,nssv1795740,nssv1795403,nssv1795770,nssv1795416,nssv1795767,nssv1795414,nssv1795766,nssv1795420,nssv1795750,nssv1795408,nssv1795395,nssv1795776,nssv1795771,nssv1795411,nssv1795421,nssv1795413,nssv1795418,nssv1795412,nssv2604130,nssv1795779,nssv2604135,nssv1795404,nssv1795748,nssv1795399,nssv1795764,nssv1795781,nssv1795739,nssv1795410,nssv2604141,nssv1795778,nssv1795768,nssv1795402,nssv1795756,nssv1795409,nssv2604134,nssv1795415,nssv1795737,nssv2604139,nssv1795754,nssv1795774,nssv1795769,nssv1795397,nssv1795759,nssv1795401,nssv1795425,nssv1795423,nssv1795738,nssv1795777,nssv1795772,nssv1795419,nssv2604138,nssv1795406,nssv1795762,nssv1795398,nssv1795753,nssv2604136,nssv1795746,nssv1795396,nssv1795742,nssv1795780,nssv1795758,nssv1795407,nssv1795755,nssv1795426,nssv1795744,nssv1795782,nssv1795747,nssv1795752,nssv1795745,nssv1795763,nssv1795751,nssv1795757,nssv1795749,nssv1795765,nssv2604133,nssv1795736,nssv1795743 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946357 1 147299198 147563357 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795796,nssv1795844,nssv1795788,nssv1796097,nssv1796086,nssv1795824,nssv1796079,nssv1795823,nssv1795795,nssv1796073,nssv1795790,nssv1795845,nssv1795805,nssv1796090,nssv1796081,nssv1795853,nssv1795804,nssv1796076,nssv1795802,nssv1795840,nssv1796082,nssv1795846,nssv1795814,nssv1795821,nssv1795801,nssv1795850,nssv1795787,nssv1795827,nssv1795800,nssv1795820,nssv1795812,nssv1795847,nssv1795794,nssv1795849,nssv1795793,nssv1795818,nssv1795799,nssv1795842,nssv1795786,nssv1795830,nssv1795792,nssv1795848,nssv1795791,nssv1795828,nssv1795803,nssv1796077,nssv1795784,nssv1795836,nssv1795808,nssv1795819,nssv1796083,nssv1795817,nssv1795789,nssv1795851,nssv1795797,nssv1796078,nssv1796080,nssv1796075,nssv1795811,nssv1795810,nssv1796087,nssv1796092,nssv1795807,nssv1796095,nssv1796084,nssv1795825,nssv1795785,nssv1796089,nssv1795798,nssv1795841,nssv1796085,nssv1795852,nssv1796088,nssv1795783,nssv1795809,nssv1795806,nssv1795834,nssv1795815,nssv1796093,nssv1795839,nssv1795838,nssv1795833,nssv1795826,nssv1796098,nssv1795831,nssv1795835,nssv1795832,nssv1795843,nssv1796096,nssv1796094,nssv1795822,nssv1795816,nssv1795813,nssv1795837,nssv1795829,nssv1796074,nssv1796091 M 97 10 0 LOC101929780,LOC388692,NBPF23 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8302 1 147299779 147859063 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19085,nssv20751,nssv24300,nssv20077,nssv19762,nssv23690,nssv18088,nssv21752,nssv24590,nssv19747,nssv24884,nssv17758,nssv24285,nssv19434,nssv20073,nssv23991,nssv21402,nssv19764,nssv18429,nssv18774,nssv19421,nssv18770,nssv20743,nssv19416,nssv21079,nssv20413,nssv21409,nssv25970,nssv21392,nssv17409,nssv18759,nssv20419,nssv21063,nssv24569,nssv19086,nssv25699,nssv24575,nssv18451,nssv21081,nssv19432,nssv22427,nssv18781,nssv20094,nssv20749,nssv22740,nssv23995,nssv23694,nssv22097,nssv18069,nssv23073,nssv20097,nssv20403,nssv23384,nssv19415,nssv18755,nssv19091,nssv21086,nssv19425,nssv20421,nssv21763,nssv22412,nssv20756,nssv21073,nssv20427,nssv27030,nssv20752,nssv18756,nssv20085,nssv19096,nssv23985,nssv19104,nssv24890,nssv20422,nssv18080,nssv19755,nssv24279,nssv20091,nssv20415,nssv19426,nssv22093,nssv20092,nssv19420,nssv24006,nssv23684,nssv20733,nssv19750,nssv18425,nssv20080,nssv19111,nssv23380,nssv22755,nssv25164,nssv19100,nssv19089,nssv19746,nssv18775,nssv17739,nssv20407,nssv22082,nssv18440,nssv21403 M 31 30 0 FCGR1C,LINC00623,LINC00869,LOC101929780,LOC388692,NBPF23,PPIAL4A,PPIAL4C NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv513730 1 147299978 147302394 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626982 M 1 1 0 LOC101929780 1 esv21838 1 147300034 147726239 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19434,esv19910,esv16745,esv16514,esv11794 M 40 29 5 FCGR1C,LOC101929780,LOC388692,NBPF23 NA06985,NA07037,NA07045,NA11931,NA12006,NA12287,NA12414,NA12489,NA12749,NA12776,NA12878,NA15510,NA18502,NA18505,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv1000384 1 147303136 147318527 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3702248,nssv3702266,nssv3702256,nssv3702240,nssv3490100,nssv3493850,nssv3702250,nssv3702249,nssv3488622,nssv3702253,nssv3702255,nssv3702252,nssv3702251,nssv3702254,nssv3502347,nssv3499921,nssv3702265,nssv3702239,nssv3494571,nssv3702258,nssv3485186,nssv3702257,nssv3498583,nssv3502477,nssv3484774,nssv3702238,nssv3491513,nssv3702262,nssv3488113,nssv3702264,nssv3498059,nssv3490577,nssv3702261,nssv3502723,nssv3702260,nssv3702259,nssv3702263,nssv3500907,nssv3494691,nssv3702241,nssv3702247,nssv3483534,nssv3483156,nssv3486237,nssv3502614,nssv3483736,nssv3492252,nssv3497739,nssv3702243,nssv3702246,nssv3702242,nssv3486025,nssv3494451,nssv3495964,nssv3494676,nssv3488612,nssv3486092,nssv3702245,nssv3501781,nssv3501459,nssv3498557,nssv3702244,nssv3487303,nssv3493148 M 29084 0 64 LOC101929780 dgv366n100 1 147303136 147328592 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001385,nsv1005226 M 29084 6 0 LOC101929780 nsv998909 1 147303136 147329439 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498722,nssv3488267 M 29084 1 1 LOC101929780 dgv367n100 1 147303136 147338762 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999156,nsv1013023 M 29084 2 0 LOC101929780 nsv1004853 1 147303136 147349249 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489220 M 29084 1 0 LOC101929780 dgv368n100 1 147303136 147353175 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998611,nsv1014100 M 29084 0 4 LOC101929780 dgv369n100 1 147303136 147390822 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007729,nsv1005133,nsv1007113,nsv1006316,nsv1007211,nsv1005705,nsv997574,nsv1002198,nsv1008453 M 29084 0 13 LOC101929780 dgv370n100 1 147303136 147426057 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999520,nsv1011585,nsv1013482,nsv1003500,nsv1012411 M 29084 0 18 LOC101929780,NBPF23 dgv371n100 1 147303136 147475972 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997530,nsv1013921,nsv1002199 M 29084 8 84 LOC101929780,NBPF23 dgv372n100 1 147303136 147475972 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008854,nsv1006499,nsv997437,nsv1003947,nsv999175,nsv1009810,nsv1013665,nsv1011661,nsv1012845,nsv1010295,nsv1001218,nsv1013075,nsv1014052,nsv998020,nsv1007451,nsv998879,nsv1011393,nsv999853,nsv1007174,nsv1001405,nsv1007195,nsv1009576,nsv1008046,nsv1011801,nsv999008,nsv1004349,nsv998198,nsv1001117,nsv1008802,nsv1008904,nsv1014931,nsv1012857,nsv1008701,nsv998411,nsv1014751,nsv998823,nsv1006963,nsv1000856,nsv1006429,nsv1005883,nsv1002689,nsv1015010,nsv1014513,nsv1010326,nsv1009235,nsv1006510,nsv1004816,nsv1010631,nsv1005768,nsv998592,nsv1006467,nsv1006205,nsv1004023,nsv1005515,nsv997675,nsv1010248,nsv1003282,nsv998402,nsv1013481,nsv1003288,nsv1004979,nsv1001222,nsv1006999,nsv1008747,nsv1000335 M 29084 0 249 LOC101929780,NBPF23 nsv514006 1 147303136 147511088 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2850846,nssv2850744,nssv2850813,nssv2849440,nssv2850720,nssv2849406,nssv2849557,nssv2849441,nssv2850767,nssv2849465,nssv2849548,nssv2850810,nssv2849600,nssv2850768,nssv2850869,nssv2850862,nssv2849459,nssv2850855,nssv2850843,nssv2850713,nssv2849382,nssv2849574,nssv2849526,nssv2849560,nssv2850731,nssv2849543,nssv2850772,nssv2849395,nssv2850773,nssv2849474,nssv2849384,nssv2849409,nssv2850865,nssv2849482,nssv2849426,nssv2850845,nssv2849550,nssv2850814,nssv2850835,nssv2850750,nssv2849387,nssv2850839,nssv2849376,nssv2850825,nssv2850830,nssv2850803,nssv2850787,nssv2849408,nssv2850736,nssv2850740,nssv2849572,nssv2850776,nssv2850864,nssv2849422,nssv2850789,nssv2850856,nssv2850797,nssv2849415,nssv2850765,nssv2850838,nssv2850805,nssv2849434,nssv2850822,nssv2850727,nssv2850811,nssv2849419,nssv2849475,nssv2849503,nssv2849525,nssv2850712,nssv2849566,nssv2849568,nssv2849591,nssv2849571,nssv2849446,nssv2849397,nssv2850717,nssv2850722,nssv2850728,nssv2850780,nssv2849498,nssv2850849,nssv2849377,nssv2849433,nssv2849509,nssv2850751,nssv2849439,nssv2850808,nssv2849461,nssv2850833,nssv2849520,nssv2849374,nssv2850752,nssv2849375,nssv2850733,nssv2849394,nssv2849547,nssv2849562,nssv2850802,nssv2849479,nssv2850746,nssv2849383,nssv2849508,nssv2849442,nssv2849551,nssv2849579,nssv2849452,nssv2850857,nssv2850760,nssv2850757,nssv2850766,nssv2849599,nssv2850859,nssv2850872,nssv2849444,nssv2850853,nssv2850758,nssv2849470,nssv2850732,nssv2850791,nssv2849540,nssv2850863,nssv2850800,nssv2849417,nssv2849522,nssv2850844,nssv2849398,nssv2849541,nssv2850873,nssv2850841,nssv2850851,nssv2849405,nssv2849518,nssv2849516,nssv2850799,nssv2850711,nssv2850807,nssv2850726,nssv2850782,nssv2849598,nssv2850709,nssv2849447,nssv2849438,nssv2849388,nssv2849392,nssv2849555,nssv2849404,nssv2850819,nssv2849491,nssv2849484,nssv2850778,nssv2849436,nssv2849538,nssv2849400,nssv2849592,nssv2850742,nssv2850812,nssv2849483,nssv2849559,nssv2849467,nssv2849386,nssv2849563,nssv2849390,nssv2850820,nssv2850723,nssv2850860,nssv2850829,nssv2849427,nssv2850793,nssv2850725,nssv2850734,nssv2849588,nssv2850826,nssv2849577,nssv2849428,nssv2849506,nssv2850828,nssv2849590,nssv2849539,nssv2849536,nssv2850817,nssv2849449,nssv2850866,nssv2849435,nssv2849499,nssv2850804,nssv2849421,nssv2849385,nssv2849587,nssv2849413,nssv2849523,nssv2849497,nssv2850718,nssv2849576,nssv2849478,nssv2850755,nssv2849380,nssv2849558,nssv2849401,nssv2849535,nssv2850739,nssv2850837,nssv2850823,nssv2849393,nssv2849396,nssv2850834,nssv2849454,nssv2850795,nssv2849473,nssv2849373,nssv2849564,nssv2849567,nssv2850779,nssv2849402,nssv2850806,nssv2849480,nssv2850783,nssv2850850,nssv2849412,nssv2849485,nssv2850759,nssv2850781,nssv2850769,nssv2849416,nssv2849466,nssv2849545,nssv2850847,nssv2849381,nssv2849597,nssv2849534,nssv2849443,nssv2850719,nssv2850867,nssv2849424,nssv2849453,nssv2849502,nssv2849565,nssv2849553,nssv2849464,nssv2850762,nssv2849399,nssv2849500,nssv2850848,nssv2850858,nssv2849389,nssv2850809,nssv2849495,nssv2849494,nssv2849496,nssv2850801,nssv2849487,nssv2850716,nssv2850824,nssv2850724,nssv2849537,nssv2849554,nssv2850785,nssv2849507,nssv2849472,nssv2850827,nssv2849432,nssv2850771,nssv2849445,nssv2850749,nssv2849462,nssv2849437,nssv2849582,nssv2849451,nssv2849514,nssv2849524,nssv2849411,nssv2849556,nssv2850721,nssv2850842,nssv2849532,nssv2850798,nssv2849546,nssv2850871,nssv2849585,nssv2850737,nssv2849414,nssv2849457,nssv2849486,nssv2849481,nssv2849581,nssv2850790,nssv2850821,nssv2850786,nssv2850729,nssv2849510,nssv2850770,nssv2849583,nssv2850730,nssv2850831,nssv2849476,nssv2849531,nssv2850754,nssv2849544,nssv2849552,nssv2849378,nssv2849501,nssv2849530,nssv2849403,nssv2850741,nssv2849489,nssv2849456,nssv2849593,nssv2850764,nssv2849570,nssv2849505,nssv2850784,nssv2849477,nssv2850743,nssv2850756,nssv2849458,nssv2849463,nssv2849512,nssv2849490,nssv2849410,nssv2849542,nssv2849425,nssv2850788,nssv2849492,nssv2849493,nssv2849418,nssv2850753,nssv2849584,nssv2849455,nssv2850815,nssv2849596,nssv2850840,nssv2850854,nssv2849549,nssv2849575,nssv2849429,nssv2849448,nssv2850763,nssv2849504,nssv2849601,nssv2849515,nssv2850794,nssv2849468,nssv2849391,nssv2850818,nssv2849519,nssv2850796,nssv2849471,nssv2849423,nssv2849561,nssv2849379,nssv2849586,nssv2850715,nssv2849517,nssv2850745,nssv2849529,nssv2849569,nssv2849469,nssv2849407,nssv2850868,nssv2850832,nssv2850777,nssv2849420,nssv2850735,nssv2850747,nssv2850761,nssv2849595,nssv2850748,nssv2849513,nssv2849521,nssv2849580,nssv2849533,nssv2850714,nssv2850852,nssv2849594,nssv2850875,nssv2849431,nssv2850874,nssv2849430,nssv2849589,nssv2850738,nssv2850816,nssv2850861,nssv2849573,nssv2850774,nssv2849528,nssv2849527,nssv2849578,nssv2850792,nssv2850836,nssv2849488,nssv2850710,nssv2850870,nssv2849460,nssv2850775,nssv2849511,nssv2849450 M 2366 390 6 LOC101929780,NBPF23 NA06984,NA06985,NA06986,NA06989,NA06993,NA06995,NA07000,NA07031,NA07034,NA07037,NA07048,NA07346,NA07347,NA07349,NA07435,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10845,NA10846,NA10847,NA10850,NA10852,NA10855,NA10856,NA10859,NA10863,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11882,NA11892,NA11917,NA11918,NA11919,NA11930,NA11992,NA11994,NA12005,NA12043,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12155,NA12156,NA12234,NA12236,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12718,NA12740,NA12748,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12827,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12891,NA12892,NA18485,NA18486,NA18487,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18507,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18547,NA18550,NA18552,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18577,NA18579,NA18582,NA18603,NA18605,NA18609,NA18611,NA18612,NA18620,NA18622,NA18624,NA18632,NA18633,NA18636,NA18852,NA18853,NA18854,NA18855,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18942,NA18945,NA18947,NA18948,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18998,NA18999,NA19003,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19175,NA19177,NA19178,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21423,NA21425,NA21438,NA21439,NA21440,NA21447,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21488,NA21489,NA21490,NA21512,NA21513,NA21514,NA21522,NA21524,NA21525,NA21580,NA21581,NA21583,NA21600,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 dgv373n100 1 147303136 147526028 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009088,nsv1011755,nsv1010098,nsv1006129,nsv1010422,nsv1000069,nsv1002156 M 29084 7 0 LOC101929780,NBPF23 dgv374n100 1 147303136 147526028 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998030,nsv998880,nsv1000349,nsv1014674,nsv1001417,nsv1000744,nsv1011708,nsv1006498,nsv1010500,nsv1000684,nsv998869,nsv1008731,nsv1009163,nsv998457,nsv998528,nsv1001519,nsv1010847,nsv1004583,nsv1011875,nsv1001875,nsv998785,nsv1011201,nsv1010837,nsv1014009,nsv1007483,nsv1014898,nsv998202,nsv1009895,nsv1008674,nsv1004120,nsv1009042,nsv1003913,nsv997555,nsv1010990,nsv1013145,nsv999573,nsv1006331,nsv1004376,nsv1013477,nsv1011426,nsv1007932,nsv1007331,nsv1014699,nsv1006993,nsv1014884,nsv1013592,nsv1002509,nsv1008301,nsv1011327,nsv1011629,nsv1005252,nsv1011018,nsv1008509,nsv1005532,nsv1006176,nsv1010827,nsv1011419,nsv1012414,nsv1004822 M 29084 0 537 LOC101929780,NBPF23 dgv375n100 1 147303136 147545083 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004525,nsv1012786,nsv1005181,nsv1005023,nsv1005042,nsv1009397,nsv1008283,nsv1008326,nsv1013237,nsv1004147,nsv1004425,nsv997617,nsv1001916 M 29084 78 1030 LOC101929780,NBPF23 dgv376n100 1 147303136 147572680 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012927,nsv1005034,nsv1007876,nsv999519,nsv1006589,nsv1006889,nsv1001787,nsv1011731,nsv1001329,nsv1004230 M 29084 0 18 LOC101929780,LOC388692,NBPF23 dgv377n100 1 147303136 147606197 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003299,nsv1005633,nsv1012815,nsv1012364 M 29084 30 94 LOC101929780,LOC388692,NBPF23 dgv378n100 1 147303136 147689071 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003509,nsv998284,nsv1011772 M 29084 3 0 FCGR1C,LOC101929780,LOC388692,NBPF23 dgv379n100 1 147303136 147703454 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007333,nsv1003007,nsv1011597,nsv1002473,nsv1002575,nsv1007735,nsv1003187,nsv1002529,nsv1003120,nsv1003628 M 29084 0 42 FCGR1C,LOC101929780,LOC388692,NBPF23 dgv380n100 1 147303136 147788452 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014445,nsv1001373,nsv1011362,nsv1011891,nsv1010894 M 29084 90 122 FCGR1C,LOC101929780,LOC388692,NBPF23 dgv381n100 1 147303136 147884100 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007460,nsv1006301 M 29084 2 0 FCGR1C,LINC00623,LINC00869,LOC101929780,LOC388692,NBPF23,PPIAL4A,PPIAL4C dgv382n100 1 147303136 147999237 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999002,nsv1001332,nsv1008187,nsv1011028,nsv1009867,nsv1000474,nsv1001444 M 29084 0 15 FCGR1C,LINC00623,LINC00869,LOC101929780,LOC388692,NBPF23,PPIAL4A,PPIAL4C esv2422083 1 147303148 147523315 OTHER complex Altshuler_et_al_2010 20811451 SNP array essv5025940,essv5036295,essv5091676,essv5039205,essv5101471,essv5072302,essv5076408,essv5078001,essv5031892,essv5088781,essv5032841,essv5099696,essv5112173,essv5120049,essv5150410,essv5087323,essv5146252,essv5133548,essv5127389,essv5110090,essv5009384,essv5131254,essv5120417,essv5149639,essv5152796,essv5140190,essv5089238,essv5079398,essv5013900,essv5105372,essv5001910,essv5080492,essv5133939,essv5137033,essv5045722,essv5110478,essv5060076,essv5050382,essv5068119,essv5086809,essv5072951,essv5110178,essv5034315,essv5150888,essv5029549,essv5013750,essv5008575,essv5003691,essv5096333,essv5151881,essv5106130,essv5157686,essv5078605,essv5087889,essv5029066,essv5041415,essv5059300,essv5134330,essv5030381,essv5077604,essv5031368,essv5102758,essv5087864,essv5059764,essv5045579,essv5041284,essv5075990,essv5152942,essv5062777,essv5018657,essv5028895,essv5029940,essv5154947,essv5098032,essv5154124,essv5130747,essv5105593,essv5011585,essv5010659,essv5111462,essv5105106,essv5058345,essv5157603,essv5070645,essv5090977,essv5112717,essv5112071,essv5061222,essv5063440,essv5093532,essv5159653,essv5152513,essv5053384,essv5010517,essv5090982,essv5112117,essv5095491,essv5086434,essv5050711,essv5034837,essv5073213,essv5020631,essv5063216,essv5026661,essv5028658,essv5048150,essv5007098,essv5096661,essv5015860,essv5080815,essv5159265,essv5070713,essv5061591,essv5095926,essv5116069,essv5065443,essv5043715,essv5002173,essv5082395,essv5093110,essv5068584,essv5140030,essv5090861,essv5151812,essv5028421,essv5002539,essv5069149,essv5064286,essv5020259,essv5126657,essv5030801,essv5064597,essv5152850,essv5129748,essv5018956,essv5109816,essv5065213,essv5160355,essv5047714,essv5046207,essv5128084,essv5156532,essv5024303,essv5142646,essv5016518,essv5028643,essv5115615,essv5035623,essv5010498,essv5108306,essv5097130,essv5086646,essv5105815,essv5057822,essv5138744,essv5055465,essv5054999,essv5082303,essv5024101,essv5094402,essv5024845,essv5032814,essv5056149,essv5040113,essv5049156,essv5073364,essv5029680,essv5047971,essv5071274,essv5076786,essv5003976,essv5073656,essv5072152,essv5032079,essv5088297,essv5100778,essv5103497,essv5006455,essv5024660,essv5062265,essv5039986,essv5116065,essv5029043,essv5070529,essv5126519,essv5063413,essv5145338,essv5025110,essv5053713,essv5014506,essv5034092,essv5155104,essv5038149,essv5037417,essv5076450,essv5110726,essv5134892,essv5008054,essv5081322,essv5123772,essv5043216,essv5061510,essv5105505,essv5025613,essv5124471,essv5049007,essv5054822,essv5051012,essv5024236,essv5109769,essv5140882,essv5120001,essv5140644,essv5157463,essv5093873,essv5082232,essv5115817,essv5103725,essv5156651,essv5155753,essv5023171,essv5090829,essv5030136,essv5029474,essv5048420,essv5039981,essv5006298,essv5128695,essv5063283,essv5063992,essv5053239,essv5137160,essv5071310,essv5112553,essv5087266,essv5113519,essv5104142,essv5151684,essv5073634,essv5159475,essv5023156,essv5066115,essv5089163,essv5030072,essv5015843 M 1184 20 225 LOC101929780,NBPF23 NA06985,NA06991,NA06994,NA07014,NA07022,NA07051,NA07055,NA07056,NA07348,NA07357,NA10830,NA10843,NA10854,NA10859,NA10864,NA10865,NA11839,NA11840,NA11881,NA11882,NA11891,NA11893,NA11894,NA11920,NA11993,NA11995,NA12044,NA12057,NA12154,NA12239,NA12264,NA12344,NA12347,NA12708,NA12716,NA12749,NA12766,NA12775,NA12817,NA12818,NA12828,NA12829,NA12890,NA17965,NA17970,NA17981,NA17990,NA18112,NA18117,NA18129,NA18143,NA18146,NA18152,NA18155,NA18161,NA18166,NA18484,NA18488,NA18506,NA18508,NA18526,NA18545,NA18548,NA18555,NA18558,NA18576,NA18592,NA18593,NA18594,NA18597,NA18608,NA18610,NA18611,NA18614,NA18616,NA18617,NA18621,NA18626,NA18631,NA18635,NA18637,NA18641,NA18645,NA18647,NA18670,NA18685,NA18696,NA18740,NA18747,NA18857,NA18913,NA18914,NA18917,NA18940,NA18946,NA18949,NA18968,NA18976,NA18977,NA18978,NA18980,NA18997,NA19000,NA19001,NA19005,NA19007,NA19009,NA19056,NA19060,NA19068,NA19072,NA19076,NA19080,NA19081,NA19099,NA19101,NA19102,NA19103,NA19118,NA19142,NA19150,NA19174,NA19179,NA19200,NA19209,NA19327,NA19373,NA19379,NA19382,NA19390,NA19394,NA19434,NA19444,NA19658,NA19661,NA19662,NA19664,NA19665,NA19682,NA19685,NA19686,NA19708,NA19722,NA19723,NA19749,NA19750,NA19751,NA19762,NA19909,NA19921,NA20279,NA20282,NA20284,NA20295,NA20301,NA20302,NA20345,NA20506,NA20508,NA20509,NA20510,NA20521,NA20522,NA20528,NA20531,NA20538,NA20542,NA20543,NA20759,NA20761,NA20765,NA20770,NA20775,NA20778,NA20797,NA20802,NA20805,NA20811,NA20826,NA20846,NA20849,NA20852,NA20859,NA20862,NA20871,NA20875,NA20882,NA20891,NA20892,NA20895,NA20899,NA20900,NA20904,NA20906,NA20909,NA20911,NA21097,NA21098,NA21109,NA21113,NA21115,NA21123,NA21125,NA21142,NA21143,NA21144,NA21297,NA21300,NA21303,NA21308,NA21309,NA21356,NA21357,NA21365,NA21378,NA21385,NA21403,NA21404,NA21418,NA21441,NA21442,NA21453,NA21486,NA21487,NA21491,NA21493,NA21494,NA21509,NA21517,NA21520,NA21523,NA21526,NA21527,NA21528,NA21599,NA21601,NA21613,NA21617,NA21631,NA21632,NA21650,NA21685,NA21689,NA21733,NA21768 nsv441790 1 147303148 147526040 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1618309,nssv1618291,nssv1618316,nssv1618298,nssv1618317,nssv1618340,nssv1618336,nssv1618308,nssv1618341,nssv1618280,nssv1618338,nssv1618305,nssv1618339,nssv1618304,nssv1618300,nssv1618287,nssv1618306,nssv1618320,nssv1618323,nssv1618295,nssv1618324,nssv1618315,nssv1618299,nssv1618292,nssv1618330,nssv1617353,nssv1618332,nssv1618301,nssv1618281,nssv1618283,nssv1618302,nssv1618303,nssv1618294,nssv1618331,nssv1618342,nssv1618288,nssv1618282,nssv1618335,nssv1618322,nssv1618297,nssv1617352,nssv1618310,nssv1618286,nssv1618334,nssv1618311,nssv1618326,nssv1618328,nssv1618329,nssv1618325,nssv1618279,nssv1617354,nssv1618313,nssv1618337,nssv1618319,nssv1618321,nssv1618314,nssv1618293,nssv1618285,nssv1618289,nssv1618318,nssv1618333,nssv1618307,nssv1618284,nssv1618296,nssv1618312,nssv1618290,nssv1618327 M 270 6 61 LOC101929780,NBPF23 NA06985,NA06991,NA06994,NA07019,NA07022,NA07034,NA07055,NA07056,NA07348,NA07357,NA10830,NA10851,NA10854,NA10857,NA10859,NA10860,NA11839,NA11840,NA11881,NA11882,NA11993,NA11995,NA12004,NA12044,NA12057,NA12154,NA12239,NA12264,NA12716,NA12717,NA18506,NA18508,NA18526,NA18545,NA18555,NA18558,NA18576,NA18592,NA18593,NA18594,NA18608,NA18611,NA18621,NA18635,NA18637,NA18856,NA18857,NA18913,NA18914,NA18940,NA18949,NA18968,NA18976,NA18978,NA18980,NA18997,NA19000,NA19005,NA19007,NA19099,NA19100,NA19101,NA19102,NA19103,NA19142,NA19200,NA19209 esv3584603 1 147303148 147703466 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9837908 M 34 0 1 FCGR1C,LOC101929780,LOC388692,NBPF23 8S dgv10n17 1 147303994 147313602 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437240,nsv437241 M 60 0 2 LOC101929780 NA18506,NA19103 nsv824520 1 147304417 147479240 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434888 M 31 0 1 LOC101929780,NBPF23 NA18942 nsv470736 1 147305743 148039974 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547768 M 443 1 0 FCGR1A,FCGR1C,HIST2H2BF,LINC00623,LINC00869,LOC101929780,LOC388692,NBPF23,PPIAL4A,PPIAL4C HGDP00919 nsv818422 1 147305744 147311729 CNV gain+loss Wang_et_al_2007 17921354 SNP array nssv1417592,nssv1415880,nssv1417221,nssv1416296,nssv1417992,nssv1418414,nssv1416295 M 112 1 6 LOC101929780 NA06991,NA11995,NA18576,NA18855,NA18857,NA18978,NA19142 dgv34n27 1 147305744 147331145 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463528,nsv463550,nsv463572,nsv463561,nsv463583,nsv463539 M 1557 0 6 LOC101929780 1780854095_A,1780854455_A,1780862246_A,1780862261_A,1780862384_A,NINDS_38 esv3894178 1 147305744 147331145 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779587,essv25782165,essv25800240,essv25800469,essv25782149,essv25784451 M 3017 0 6 LOC101929780 nsv547701 1 147305744 147331145 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173150,nssv723144,nssv1173146,nssv723135,nssv1173147,nssv723143,nssv1173148,nssv723134,nssv1173152,nssv723133,nssv1173144,nssv723132,nssv1173145,nssv723142,nssv1173149,nssv723136,nssv1173151,nssv723138,nssv1173143,nssv723137,nssv723141,nssv723140,nssv723139,nssv723159,nssv723170,nssv723146,nssv723145,nssv723147,nssv723150,nssv723148,nssv723149,nssv723151,nssv723152,nssv723153,nssv723157,nssv723154,nssv723155,nssv723156,nssv723158,nssv723166,nssv723161,nssv723160,nssv723165,nssv723162,nssv723164,nssv723163,nssv723168,nssv723167,nssv723169,nssv723179,nssv723173,nssv723186,nssv723171,nssv723172,nssv723178,nssv723176,nssv723174,nssv723175,nssv723177,nssv723181,nssv723180,nssv723185,nssv723182,nssv723184,nssv723183 M 17421 0 65 LOC101929780 1780854095_A,1780854326_A,1780854328_A,1780854455_A,1780862246_A,1780862261_A,1780862384_A,1782681112_A,1798860192_A,NINDS_38 nsv818433 1 147305744 147331145 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417386,nssv1416483,nssv1416494,nssv1418340 M 112 0 4 LOC101929780 NA10857,NA12044,NA12239,NA18949 dgv544n54 1 147305744 147378916 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547706,nsv547728,nsv547729,nsv547705,nsv547734,nsv547704,nsv547738 M 17421 0 8 LOC101929780 nsv818445 1 147305744 147427061 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417264,nssv1416215,nssv1416217,nssv1418039,nssv1417965,nssv1416293,nssv1417881,nssv1417966 M 112 0 8 LOC101929780,NBPF23 NA06985,NA07348,NA07357,NA10851,NA11881,NA12057,NA18593,NA18856 nsv547708 1 147305744 147448972 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723193,nssv723194 M 17421 1 1 LOC101929780,NBPF23 dgv35n27 1 147305744 147478120 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463705,nsv463728,nsv463605,nsv463661,nsv463739,nsv463594,nsv463617,nsv463672,nsv463639,nsv463628,nsv463750,nsv463716,nsv463694,nsv463650,nsv463683 M 1557 0 15 LOC101929780,NBPF23 HGDP00007,HGDP00033,HGDP00045,HGDP00458,HGDP00530,HGDP00607,HGDP00612,HGDP00615,HGDP00720,HGDP00768,HGDP00772,HGDP00881,HGDP01096,HGDP01242,HGDP01375 esv3894145 1 147305744 147478120 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25790825,essv25793914,essv25795523,essv25795392,essv25778758,essv25793865,essv25794733,essv25795372,essv25786169,essv25801137,essv25785879,essv25795118,essv25779780,essv25797192,essv25792380,essv25778338,essv25799170,essv25786868,essv25782306,essv25794669,essv25794439,essv25792347,essv25795054,essv25795357,essv25779559,essv25795281,essv25788413,essv25793378,essv25794290,essv25795105,essv25793586,essv25795910,essv25794469,essv25793694,essv25794399,essv25785114,essv25782377,essv25794006,essv25793825,essv25788983,essv25795183,essv25795163,essv25795341,essv25786527,essv25794253,essv25795519,essv25793978,essv25794830,essv25794531,essv25794341,essv25785713,essv25793939,essv25789323,essv25785269,essv25793574,essv25794060,essv25801636,essv25781714,essv25795419,essv25780136,essv25781636,essv25795797,essv25795441,essv25789235,essv25795834,essv25794492,essv25793631,essv25798108 M 3017 1 67 LOC101929780,NBPF23 nsv433189 1 147305744 147478120 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463070 M 9 0 1 LOC101929780,NBPF23 NA18555 nsv818456 1 147305744 147478120 CNV gain+loss Wang_et_al_2007 17921354 SNP array nssv1415807,nssv1417200,nssv1418527,nssv1417311,nssv1418041,nssv1415808,nssv1417517,nssv1418040,nssv1418528,nssv1416998,nssv1417117 M 112 3 8 LOC101929780,NBPF23 NA06994,NA10830,NA10859,NA10860,NA11882,NA11993,NA12154,NA12264,NA18558,NA18608,NA18968 dgv545n54 1 147305744 147666876 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547798,nsv547753,nsv547752,nsv547732,nsv547751,nsv547717,nsv547716 M 17421 0 14 FCGR1C,LOC101929780,LOC388692,NBPF23 dgv11n17 1 147306554 147431908 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437091,nsv437069 M 60 0 2 LOC101929780,NBPF23 NA10830,NA12752 dgv4e213 1 147306690 147377368 CNV gain Mokhtar_et_al_2014 24956385 SNP array esv3584961,esv3584488 M 34 2 0 LOC101929780 KSF005,KSF008 esv2750808 1 147306690 147522032 CNV gain Pinto_et_al_2007 17911159 SNP array essv6988412,essv6981512 M 771 2 0 LOC101929780,NBPF23 BEC_289 esv2750809 1 147306690 147980523 CNV gain Pinto_et_al_2007 17911159 SNP array essv6985822,essv6985823 M 771 2 0 FCGR1C,LINC00623,LINC00869,LOC101929780,LOC388692,NBPF23,PPIAL4A,PPIAL4C SPC_61 dgv546n54 1 147307527 147512738 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547784,nsv547736 M 17421 2 0 LOC101929780,NBPF23 esv3584477 1 147307826 147434536 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838854 M 34 1 0 LOC101929780,NBPF23 OA062 dgv383n100 1 147308334 147788452 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008073,nsv999610,nsv1012531 M 29084 0 4 FCGR1C,LOC101929780,LOC388692,NBPF23 nsv437993 1 147308446 147309299 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468086,nssv468097 M 269 0 2 LOC101929780 NA10857,NA12044 nsv437058 1 147308446 147356586 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466939 M 60 0 1 LOC101929780 NA10857 dgv12n17 1 147308446 147390776 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437080,nsv437102 M 60 0 2 LOC101929780 NA07348,NA12753 nsv547739 1 147311729 147389264 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723279,nssv723278 M 17421 0 2 LOC101929780 dgv547n54 1 147319633 147367339 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547766,nsv547775,nsv547761 M 17421 0 4 LOC101929780 dgv384n100 1 147326266 147471022 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007656,nsv1012920,nsv1003567,nsv998783,nsv1008119,nsv1004864,nsv1010465 M 29084 0 9 LOC101929780,NBPF23 nsv547767 1 147327306 147378916 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723368,nssv723367,nssv723369 M 17421 0 3 LOC101929780 dgv385n100 1 147328592 147390503 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006729,nsv1012427 M 29084 0 8 LOC101929780 dgv386n100 1 147328592 147447335 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012205,nsv998776,nsv1004670,nsv1008855 M 29084 0 37 LOC101929780,NBPF23 dgv387n100 1 147328592 147475972 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003507,nsv1004272,nsv1004593,nsv1001208,nsv1010516 M 29084 5 0 LOC101929780,NBPF23 dgv548n54 1 147345324 147478120 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547799,nsv547779,nsv547778,nsv547796,nsv547795,nsv547794,nsv547789,nsv547788,nsv547800,nsv547790,nsv547791 M 17421 0 21 LOC101929780,NBPF23 dgv549n54 1 147345324 147496429 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547780,nsv547797 M 17421 0 3 LOC101929780,NBPF23 dgv550n54 1 147345324 147496429 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547781,nsv547792 M 17421 2 4 LOC101929780,NBPF23 nsv547782 1 147345471 147389264 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723394 M 17421 0 1 LOC101929780 nsv1013056 1 147348033 147456930 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488276,nssv3488799 M 29084 1 1 LOC101929780,NBPF23 dgv388n100 1 147349249 147390822 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010399,nsv1007749 M 29084 0 3 LOC101929780 dgv389n100 1 147349249 147521544 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006322,nsv1005650,nsv1000989,nsv1008341 M 29084 0 6 LOC101929780,NBPF23 dgv551n54 1 147352701 147441370 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547786,nsv547785,nsv547787 M 17421 0 3 LOC101929780,NBPF23 nsv947038 1 147356377 147357019 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604155,nssv2604176,nssv2604160,nssv2604193,nssv2604157,nssv2604184,nssv2604172,nssv2604187,nssv2604175,nssv2604200,nssv2604152,nssv2604191,nssv2604148,nssv2604205,nssv2604216,nssv2604177,nssv2604171,nssv2604142,nssv2604218,nssv2604181,nssv2604217,nssv2604183,nssv2604156,nssv2604202,nssv2604144,nssv2604201,nssv2604161,nssv2604186,nssv2604162,nssv2604179,nssv2604151,nssv2604197,nssv2604150,nssv2604206,nssv2604219,nssv2604209,nssv2604213,nssv2604178,nssv2604174,nssv2604169,nssv2604215,nssv2604190,nssv2604165,nssv2604189,nssv2604222,nssv2604196,nssv2604168,nssv2604203,nssv2604154,nssv2604199,nssv2604221,nssv2604170,nssv2604145,nssv2604207,nssv2604164,nssv2604212,nssv2604163,nssv2604208,nssv2604153,nssv2604188,nssv2604158,nssv2604180,nssv2604147,nssv2604182,nssv2604159,nssv2604195,nssv2604149,nssv2604166,nssv2604214,nssv2604185,nssv2604146,nssv2604204,nssv2604167,nssv2604192,nssv2604220,nssv2604198,nssv2604143,nssv2604194,nssv2604210,nssv2604173,nssv2604211 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv437113 1 147356586 147390776 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466994 M 60 0 1 LOC101929780 NA07048 nsv947039 1 147357019 147357612 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604237,nssv2604279,nssv2604308,nssv2604228,nssv2604250,nssv2604288,nssv2604267,nssv2604301,nssv2604255,nssv2604276,nssv2604233,nssv2604265,nssv2604314,nssv2604271,nssv2604252,nssv2604285,nssv2604256,nssv2604275,nssv2604248,nssv2604270,nssv2604230,nssv2604261,nssv2604240,nssv2604298,nssv2604309,nssv2604289,nssv2604264,nssv2604258,nssv2604260,nssv2604277,nssv2604259,nssv2604231,nssv2604226,nssv2604274,nssv2604236,nssv2604283,nssv2604307,nssv2604227,nssv2604312,nssv2604280,nssv2604263,nssv2604281,nssv2604313,nssv2604299,nssv2604246,nssv2604297,nssv2604251,nssv2604296,nssv2604254,nssv2604223,nssv2604311,nssv2604286,nssv2604253,nssv2604300,nssv2604244,nssv2604273,nssv2604238,nssv2604291,nssv2604305,nssv2604284,nssv2604243,nssv2604302,nssv2604225,nssv2604235,nssv2604257,nssv2604262,nssv2604229,nssv2604293,nssv2604249,nssv2604234,nssv2604247,nssv2604292,nssv2604245,nssv2604295,nssv2604310,nssv2604278,nssv2604306,nssv2604272,nssv2604232,nssv2604282,nssv2604239,nssv2604269,nssv2604242,nssv2604294,nssv2604266,nssv2604290,nssv2604241,nssv2604303,nssv2604268,nssv2604287,nssv2604304,nssv2604224 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947040 1 147357612 147358844 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604342,nssv2604372,nssv2604399,nssv2604380,nssv2604357,nssv2604359,nssv2604341,nssv2604352,nssv2604343,nssv2604315,nssv2603247,nssv2604383,nssv2604335,nssv2604393,nssv2603248,nssv2604364,nssv2604346,nssv2604316,nssv2604331,nssv2604391,nssv2604355,nssv2604390,nssv2604396,nssv2604353,nssv2604339,nssv2604389,nssv2603246,nssv2604367,nssv2604317,nssv2604368,nssv2604336,nssv2604369,nssv2604318,nssv2604392,nssv2604351,nssv2604319,nssv2603250,nssv2604370,nssv2604340,nssv2604363,nssv2604333,nssv2604374,nssv2604321,nssv2604384,nssv2604345,nssv2604382,nssv2603251,nssv2604366,nssv2604325,nssv2604375,nssv2604354,nssv2604385,nssv2604337,nssv2604323,nssv2604338,nssv2604356,nssv2604324,nssv2603252,nssv2604344,nssv2604326,nssv2603249,nssv2604365,nssv2604332,nssv2604373,nssv2604358,nssv2604349,nssv2604334,nssv2604386,nssv2604327,nssv2604320,nssv2604350,nssv2604362,nssv2604329,nssv2604378,nssv2604328,nssv2604360,nssv2604330,nssv2604379,nssv2604322,nssv2604381,nssv2604397,nssv2604395,nssv2604398,nssv2604394,nssv2604347,nssv2604387,nssv2604348,nssv2604361,nssv2604371,nssv2604376,nssv2604388,nssv2604377 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947041 1 147358844 147360171 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603272,nssv2603320,nssv2603277,nssv2603313,nssv2603295,nssv2603330,nssv2603266,nssv2603257,nssv2603274,nssv2603287,nssv2603273,nssv2603333,nssv2603263,nssv2603308,nssv2603335,nssv2603301,nssv2603278,nssv2603331,nssv2603255,nssv2603261,nssv2603342,nssv2603323,nssv2603275,nssv2603329,nssv2603269,nssv2603311,nssv2603267,nssv2603324,nssv2603343,nssv2603315,nssv2603336,nssv2603297,nssv2603289,nssv2603309,nssv2603296,nssv2603327,nssv2603285,nssv2603303,nssv2603268,nssv2603332,nssv2603284,nssv2603326,nssv2603259,nssv2603290,nssv2603276,nssv2603318,nssv2603286,nssv2603258,nssv2603282,nssv2603316,nssv2603288,nssv2603328,nssv2603260,nssv2603304,nssv2603337,nssv2603325,nssv2603265,nssv2603299,nssv2603338,nssv2603305,nssv2603262,nssv2603254,nssv2603271,nssv2603302,nssv2603280,nssv2603317,nssv2603341,nssv2603314,nssv2603281,nssv2603322,nssv2603293,nssv2603300,nssv2603339,nssv2603310,nssv2603292,nssv2603312,nssv2603334,nssv2603321,nssv2603256,nssv2603306,nssv2603283,nssv2603264,nssv2603270,nssv2603291,nssv2603340,nssv2603294,nssv2603279,nssv2603253,nssv2603319,nssv2603307,nssv2603298 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947043 1 147360171 147361462 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603351,nssv2603379,nssv2603354,nssv2603406,nssv2603364,nssv2603410,nssv2603355,nssv2603345,nssv2603346,nssv2603409,nssv2603366,nssv2603403,nssv2603358,nssv2603426,nssv2603373,nssv2603371,nssv2603434,nssv2603399,nssv2603424,nssv2603397,nssv2603362,nssv2603391,nssv2603427,nssv2603411,nssv2603348,nssv2603429,nssv2603360,nssv2603430,nssv2603420,nssv2603405,nssv2603416,nssv2603398,nssv2603428,nssv2603382,nssv2603356,nssv2603372,nssv2603361,nssv2603389,nssv2603350,nssv2603412,nssv2603353,nssv2603378,nssv2603435,nssv2603380,nssv2603357,nssv2603396,nssv2603417,nssv2603395,nssv2603349,nssv2603385,nssv2603421,nssv2603387,nssv2603432,nssv2603400,nssv2603365,nssv2603384,nssv2603374,nssv2603381,nssv2603370,nssv2603408,nssv2603423,nssv2603414,nssv2603422,nssv2603368,nssv2603377,nssv2603402,nssv2603376,nssv2603392,nssv2603431,nssv2603407,nssv2603363,nssv2603413,nssv2603367,nssv2603394,nssv2603415,nssv2603386,nssv2603419,nssv2603401,nssv2603352,nssv2603433,nssv2603418,nssv2603425,nssv2603369,nssv2603390,nssv2603347,nssv2603375,nssv2603359,nssv2603404,nssv2603388,nssv2603383,nssv2603393 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv390n100 1 147364161 147471022 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007873,nsv1002200 M 29084 0 2 LOC101929780,NBPF23 nsv947044 1 147367504 147371018 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603438,nssv2603488,nssv2603460,nssv2603475,nssv2605047,nssv2603473,nssv2603452,nssv2603485,nssv2603455,nssv2603489,nssv2603437,nssv2605045,nssv2603442,nssv2603479,nssv2603448,nssv2605040,nssv2605055,nssv2603486,nssv2603456,nssv2603436,nssv2603453,nssv2605039,nssv2605052,nssv2605034,nssv2603457,nssv2605035,nssv2605051,nssv2603474,nssv2603441,nssv2605041,nssv2605046,nssv2603491,nssv2603450,nssv2603478,nssv2603443,nssv2603476,nssv2603447,nssv2603469,nssv2603439,nssv2605036,nssv2603445,nssv2605033,nssv2605053,nssv2603480,nssv2603451,nssv2605044,nssv2603467,nssv2605043,nssv2603465,nssv2603462,nssv2603446,nssv2605032,nssv2603440,nssv2603472,nssv2603449,nssv2603463,nssv2603461,nssv2603483,nssv2603454,nssv2603477,nssv2605054,nssv2603481,nssv2603444,nssv2603459,nssv2605048,nssv2603490,nssv2603464,nssv2603482,nssv2603458,nssv2603471,nssv2603468,nssv2603484,nssv2605049,nssv2605038,nssv2605050,nssv2603466,nssv2605037,nssv2603487,nssv2603470,nssv2605042 M 97 10 0 LOC101929780 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv437242 1 147373047 147395259 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467123 M 60 0 1 LOC101929780,NBPF23 NA18506 dgv552n54 1 147378916 147453640 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547802,nsv547801 M 17421 0 2 NBPF23 dgv553n54 1 147378916 147478120 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547806,nsv547805,nsv547803 M 17421 0 3 NBPF23 nsv1014796 1 147381141 147703454 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498102 M 29084 0 1 FCGR1C,LOC388692,NBPF23 nsv1008776 1 147381253 147456930 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502231 M 29084 1 0 NBPF23 nsv831481 1 147381554 147607012 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450206,nssv1450139,nssv1449973,nssv1450195,nssv1450150,nssv1450117,nssv1450084,nssv1450184,nssv1450006,nssv1450095,nssv1450017,nssv1450172,nssv1450039,nssv1449984,nssv1449962,nssv1450050,nssv1450061,nssv1450028,nssv1450073,nssv1450161,nssv1450217,nssv1450228,nssv1449995,nssv1450128,nssv1450106 M 95 25 0 LOC388692,NBPF23 nsv1000674 1 147383157 147496455 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704179 M 29084 1 0 NBPF23 esv3584604 1 147383169 147614151 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9837839 M 34 0 1 LOC388692,NBPF23 OA092 dgv391n100 1 147385704 147447335 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998115,nsv1008861 M 29084 0 3 NBPF23 dgv392n100 1 147385704 147606197 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005437,nsv1011593,nsv1003289 M 29084 3 0 LOC388692,NBPF23 esv3584605 1 147385716 147469422 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838753 M 34 0 1 NBPF23 OA018b dgv554n54 1 147387670 147549001 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547815,nsv547804 M 17421 0 2 LOC388692,NBPF23 nsv819198 1 147404137 147421972 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418670 M 2 1 0 NBPF23 AK1 dgv555n54 1 147407083 147453640 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547808,nsv547809,nsv547807,nsv547816,nsv547817 M 17421 0 7 NBPF23 dgv556n54 1 147407083 147468611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547821,nsv547810,nsv547811,nsv547820,nsv547819,nsv547818 M 17421 0 8 NBPF23 nsv547812 1 147407083 147478120 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723445 M 17421 0 1 NBPF23 dgv557n54 1 147407083 147512738 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547822,nsv547814,nsv547825,nsv547813,nsv547823 M 17421 0 10 NBPF23 dgv393n100 1 147418132 147521544 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997900,nsv1004070,nsv1008443 M 29084 3 0 NBPF23 dgv558n54 1 147422717 147468611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547828,nsv547826,nsv547824 M 17421 0 4 "" dgv394n100 1 147424057 148039121 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010687,nsv1007049,nsv998443,nsv1000291,nsv1009189,nsv1006368,nsv1003760,nsv998104,nsv1008350,nsv1010983,nsv1006771,nsv1000941 M 29084 16 0 FCGR1A,FCGR1C,HIST2H2BF,LINC00623,LINC00869,LOC388692,PPIAL4A,PPIAL4C dgv395n100 1 147425953 147521544 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007431,nsv1007521,nsv1006442,nsv1003337 M 29084 0 14 "" nsv1005442 1 147425953 147572680 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704188 M 29084 0 1 LOC388692 dgv396n100 1 147425953 147703454 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003132,nsv1003842,nsv1002220,nsv999562,nsv997870,nsv999424 M 29084 0 43 FCGR1C,LOC388692 dgv397n100 1 147425953 147788452 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010943,nsv1006677,nsv1011058,nsv1012846 M 29084 0 12 FCGR1C,LOC388692 dgv559n54 1 147430593 147468611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547827,nsv547829,nsv547832 M 17421 0 3 "" nsv2766 1 147431865 147465228 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3325 M 9 1 0 "" NA12878 dgv560n54 1 147434266 147496429 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547837,nsv547830,nsv547833 M 17421 0 6 "" dgv561n54 1 147434266 147512738 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547838,nsv547839,nsv547834,nsv547831 M 17421 0 8 "" nsv1011871 1 147434524 147496455 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704206 M 29084 1 0 "" esv3894156 1 147435422 147779233 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25781470,essv25782629,essv25784723,essv25782249,essv25779372,essv25784110,essv25779110,essv25779973,essv25785694,essv25800722,essv25782745,essv25781951,essv25783985,essv25779767,essv25783862 M 3017 0 15 FCGR1C,LOC388692 dgv562n54 1 147439738 147485725 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547835,nsv547836 M 17421 0 2 "" dgv398n100 1 147447335 147521544 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005614,nsv1010908,nsv998159,nsv1014495,nsv1001574 M 29084 0 6 "" nsv1012720 1 147454151 147572680 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496624 M 29084 1 0 LOC388692 nsv438004 1 147467750 147484617 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468163,nssv468186,nssv468141,nssv468130,nssv468152,nssv468119,nssv468108,nssv468174 M 269 0 8 "" NA07048,NA07055,NA10857,NA12044,NA18506,NA18508,NA18856,NA18857 dgv399n100 1 147469167 147526028 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1015077,nsv998241,nsv1012770,nsv998544,nsv1006918,nsv1011741,nsv1013929,nsv1000152,nsv1010297 M 29084 16 0 "" nsv1008864 1 147469167 147545083 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486116,nssv3704213 M 29084 2 0 "" nsv1004435 1 147469943 147496455 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704220 M 29084 1 0 "" dgv400n100 1 147469943 147606197 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000869,nsv1014903,nsv1008848 M 29084 5 0 LOC388692 dgv401n100 1 147470375 147515339 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007338,nsv1002443,nsv1004144,nsv998468,nsv1008820 M 29084 0 5 "" dgv402n100 1 147470869 147526028 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008418,nsv1013697,nsv1000041,nsv1014094,nsv997417,nsv1006680,nsv1002183 M 29084 0 8 "" nsv1006302 1 147471022 147545083 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501333,nssv3491454 M 29084 0 2 "" esv3584606 1 147471673 147526040 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838690 M 34 0 1 "" OA017 dgv403n100 1 147475004 147521544 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002125,nsv1003520 M 29084 4 4 "" dgv404n100 1 147475004 147703454 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005628,nsv1002742 M 29084 2 0 FCGR1C,LOC388692 nsv1000319 1 147475768 147545083 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501604,nssv3493529 M 29084 1 1 "" nsv998643 1 147475768 147640153 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499275 M 29084 1 0 FCGR1C,LOC388692 dgv13n17 1 147481804 147509945 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437124,nsv437135 M 60 0 2 "" NA06991,NA07048 nsv438015 1 147495710 147509945 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468208,nssv468197 M 269 0 2 "" NA19099,NA19100 dgv405n100 1 147495710 147515339 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002755,nsv1015004 M 29084 0 2 "" dgv406n100 1 147495710 147521544 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010966,nsv1009284 M 29084 3 0 "" dgv407n100 1 147495710 147526028 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010852,nsv1006370 M 29084 11 15 "" esv3584607 1 147495710 147526040 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838540 M 34 0 1 "" OA072 nsv1010362 1 147495710 147541611 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493206 M 29084 0 1 "" dgv408n100 1 147495710 147558211 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006982,nsv997676 M 29084 5 0 LOC388692 dgv409n100 1 147495710 147572680 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007756,nsv1010917 M 29084 7 3 LOC388692 nsv1014181 1 147495710 147884100 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497413 M 29084 1 0 FCGR1C,LINC00623,LINC00869,LOC388692,PPIAL4A,PPIAL4C dgv19n16 1 147500084 147950526 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436810,nsv436019,nsv436022 M 2 2 0 FCGR1C,LINC00623,LINC00869,LOC388692,PPIAL4A,PPIAL4C NA15510,NA18505 nsv437243 1 147505129 147515551 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467124 M 60 0 1 "" NA19100 dgv410n100 1 147509275 147526028 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000364,nsv1013280 M 29084 83 21 "" dgv411n100 1 147509275 147545083 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002884,nsv1010165 M 29084 3 0 "" nsv1012466 1 147509275 147545083 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705020,nssv3705019,nssv3486338,nssv3493834,nssv3486591,nssv3491008 M 29084 5 1 "" dgv412n100 1 147509337 147526028 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998866,nsv1002346 M 29084 5 0 "" dgv413n100 1 147512642 147703454 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009504,nsv1011843,nsv1007332,nsv1011047 M 29084 0 21 FCGR1C,LOC388692 esv3584608 1 147523315 147703466 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838924 M 34 0 1 FCGR1C,LOC388692 1WS esv2421626 1 147523315 147710728 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5042347,essv5126850,essv5084415,essv5087029,essv5119211,essv5045941,essv5109064,essv5102155,essv5069989,essv5061438,essv5070523,essv5085349,essv5146732,essv5131411,essv5026867 M 1184 0 15 FCGR1C,LOC388692 NA06985,NA11839,NA11840,NA12775,NA18978,NA19099,NA19434,NA19750,NA20506,NA20543,NA20805,NA20875,NA20882,NA20892,NA20899 nsv159959 1 147561530 147561530 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178537 M 24 "" nsv946359 1 147563357 147610108 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796106,nssv1796107,nssv1796102,nssv1796099,nssv1796108,nssv1796104,nssv1796101,nssv1796100,nssv1796105,nssv1796109,nssv1796103 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv436776 1 147579769 147580285 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465842 M 2 1 0 "" NA18505 esv3434769 1 147590452 147591650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691974 M 185 1 0 "" NA12878 nsv436282 1 147593087 147700280 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465843 M 2 0 1 FCGR1C NA18505 esv2001343 1 147603945 147604475 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4857576 M 1 0 1 "" NA18507 nsv160403 1 147604130 147604449 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178981 M 24 "" nsv946360 1 147610108 147611327 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796130,nssv1796325,nssv1796135,nssv1796282,nssv1796117,nssv1796153,nssv1796111,nssv1796136,nssv1796121,nssv1796316,nssv1796312,nssv1796301,nssv1796306,nssv1796143,nssv1796129,nssv1796324,nssv1796131,nssv1796298,nssv1796125,nssv1796303,nssv1796132,nssv1796318,nssv1796126,nssv1796317,nssv1796309,nssv1796323,nssv1796139,nssv1796295,nssv1796112,nssv1796159,nssv1796313,nssv1796322,nssv1796128,nssv1796304,nssv1796308,nssv1796158,nssv1796123,nssv1796140,nssv1796114,nssv1796290,nssv1796315,nssv1796152,nssv1796113,nssv1796148,nssv1796127,nssv1796292,nssv1796122,nssv1796149,nssv1796310,nssv1796289,nssv1796118,nssv1796160,nssv1796138,nssv1796296,nssv1796141,nssv1796281,nssv1796120,nssv1796151,nssv1796116,nssv1796302,nssv1796115,nssv1796300,nssv1796124,nssv1796283,nssv1796134,nssv1796154,nssv1796119,nssv1796305,nssv1796314,nssv1796299,nssv1796311,nssv1796144,nssv1796307,nssv1796147,nssv1796291,nssv1796288,nssv1796146,nssv1796319,nssv1796157,nssv1796321,nssv1796142,nssv1796161,nssv1796156,nssv1796320,nssv1796155,nssv1796110,nssv1796133,nssv1796293,nssv1796145,nssv1796287,nssv1796150,nssv1796286,nssv1796137,nssv1796285,nssv1796284,nssv1796297,nssv1796294 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946361 1 147611327 147665322 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796332,nssv1796330,nssv1796333,nssv1796336,nssv1796335,nssv1796334,nssv1796329,nssv1796327,nssv1796328,nssv1796326,nssv1796331 M 97 10 0 FCGR1C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv20n16 1 147616382 147995101 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436360,nsv436451 M 2 0 1 FCGR1C,LINC00623,LINC00869,PPIAL4A,PPIAL4C NA18505 nsv946362 1 147665322 147665972 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796354,nssv1796398,nssv1796418,nssv1796367,nssv1796342,nssv1796391,nssv1796414,nssv1796393,nssv1796358,nssv1796364,nssv1796345,nssv1796383,nssv1796362,nssv1796388,nssv1796338,nssv1796373,nssv1796420,nssv1796390,nssv1796356,nssv1796405,nssv1796366,nssv1796387,nssv1796421,nssv1796411,nssv1796346,nssv1796430,nssv1796349,nssv1796433,nssv1796417,nssv1796372,nssv1796359,nssv1796409,nssv1796355,nssv1796424,nssv1796423,nssv1796429,nssv1796341,nssv1796369,nssv1796350,nssv1796360,nssv1796357,nssv1796425,nssv1796422,nssv1796370,nssv1796339,nssv1796406,nssv1796353,nssv1796403,nssv1796365,nssv1796386,nssv1796352,nssv1796363,nssv1796416,nssv1796431,nssv1796348,nssv1796397,nssv1796347,nssv1796404,nssv1796344,nssv1796432,nssv1796343,nssv1796400,nssv1796361,nssv1796413,nssv1796368,nssv1796410,nssv1796340,nssv1796412,nssv1796351,nssv1796385,nssv1796419,nssv1796377,nssv1796415,nssv1796389,nssv1796381,nssv1796408,nssv1796371,nssv1796380,nssv1796379,nssv1796375,nssv1796376,nssv1796399,nssv1796402,nssv1796396,nssv1796407,nssv1796378,nssv1796374,nssv1796426,nssv1796428,nssv1796382,nssv1796392,nssv1796427,nssv1796337,nssv1796394,nssv1796395,nssv1796401,nssv1796384 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946363 1 147665972 147674956 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796437,nssv1796435,nssv1796443,nssv1796439,nssv1796441,nssv1796444,nssv1796436,nssv1796438,nssv1796440,nssv1796434,nssv1796442 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946364 1 147674956 147686526 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796462,nssv1796498,nssv1796456,nssv1796496,nssv1796526,nssv1796472,nssv1796476,nssv1796502,nssv1796450,nssv1796479,nssv1796452,nssv1796500,nssv1796530,nssv1796514,nssv1796522,nssv1796532,nssv1796474,nssv1796445,nssv1796453,nssv1796492,nssv1796466,nssv1796477,nssv1796465,nssv1796490,nssv1796464,nssv1796480,nssv1796447,nssv1796471,nssv1796525,nssv1796519,nssv1796467,nssv1796538,nssv1796463,nssv1796537,nssv1796527,nssv1796478,nssv1796449,nssv1796533,nssv1796531,nssv1796491,nssv1796458,nssv1796501,nssv1796470,nssv1796481,nssv1796461,nssv1796513,nssv1796528,nssv1796541,nssv1796473,nssv1796511,nssv1796460,nssv1796468,nssv1796446,nssv1796508,nssv1796457,nssv1796517,nssv1796454,nssv1796495,nssv1796529,nssv1796539,nssv1796523,nssv1796540,nssv1796451,nssv1796512,nssv1796469,nssv1796485,nssv1796524,nssv1796475,nssv1796459,nssv1796506,nssv1796448,nssv1796521,nssv1796455,nssv1796520,nssv1796535,nssv1796518,nssv1796494,nssv1796505,nssv1796499,nssv1796516,nssv1796515,nssv1796497,nssv1796488,nssv1796486,nssv1796484,nssv1796509,nssv1796483,nssv1796507,nssv1796487,nssv1796504,nssv1796493,nssv1796536,nssv1796534,nssv1796510,nssv1796482,nssv1796489,nssv1796503 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946365 1 147686526 147691015 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796545,nssv1796550,nssv1796548,nssv1796552,nssv1796551,nssv1796542,nssv1796544,nssv1796547,nssv1796549,nssv1796546,nssv1796543 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946366 1 147691015 147695403 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796570,nssv1796608,nssv1796634,nssv1796593,nssv1796631,nssv1796645,nssv1796637,nssv1796591,nssv1796635,nssv1796590,nssv2605063,nssv1796617,nssv1796560,nssv1796587,nssv1796558,nssv1796643,nssv1796556,nssv1796600,nssv2605058,nssv1796610,nssv1796554,nssv1796553,nssv1796630,nssv1796580,nssv1796562,nssv1796604,nssv1796584,nssv1796588,nssv1796638,nssv1796618,nssv1796561,nssv1796619,nssv1796564,nssv1796606,nssv2605062,nssv1796599,nssv1796574,nssv1796640,nssv1796572,nssv1796598,nssv1796555,nssv1796646,nssv2605065,nssv1796641,nssv1796633,nssv1796627,nssv1796571,nssv1796589,nssv1796639,nssv1796649,nssv1796581,nssv1796621,nssv1796557,nssv1796576,nssv1796566,nssv1796586,nssv1796575,nssv1796585,nssv1796578,nssv1796609,nssv1796582,nssv1796611,nssv1796569,nssv2605066,nssv1796636,nssv1796625,nssv1796565,nssv1796642,nssv1796573,nssv1796603,nssv1796559,nssv1796648,nssv1796568,nssv1796616,nssv1796577,nssv2605057,nssv1796563,nssv1796579,nssv1796567,nssv1796612,nssv1796632,nssv1796622,nssv1796628,nssv1796647,nssv1796620,nssv1796583,nssv1796596,nssv2605059,nssv1796613,nssv1796602,nssv1796626,nssv1796629,nssv1796623,nssv2605061,nssv2605060,nssv2605056,nssv1796605,nssv1796624,nssv1796607,nssv1796615,nssv1796595,nssv1796644,nssv1796614,nssv1796597,nssv1796601,nssv1796594,nssv1796592,nssv2605064 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946367 1 147695403 147726050 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796657,nssv1796650,nssv1796656,nssv1796660,nssv1796653,nssv1796655,nssv1796659,nssv1796651,nssv1796652,nssv1796654,nssv1796658 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946368 1 147776050 147872452 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796678,nssv1794027,nssv1794049,nssv1794023,nssv1794040,nssv1794030,nssv1796692,nssv1794026,nssv1796686,nssv1794029,nssv1796666,nssv1794033,nssv1796671,nssv1794054,nssv1794042,nssv1796715,nssv1796668,nssv1796709,nssv1796690,nssv1796703,nssv1794043,nssv1794037,nssv1796669,nssv1794056,nssv1796681,nssv1794038,nssv1794048,nssv1796702,nssv1796682,nssv1796705,nssv1796680,nssv1794039,nssv1796664,nssv1796700,nssv1796672,nssv1794055,nssv1796689,nssv1796701,nssv1796679,nssv1796714,nssv1796663,nssv1796684,nssv1794044,nssv1796698,nssv1796670,nssv1796699,nssv1796674,nssv1794018,nssv1796683,nssv1796695,nssv1794045,nssv1794035,nssv1796673,nssv1794057,nssv1796677,nssv1794021,nssv1794047,nssv1796712,nssv1794041,nssv1794032,nssv1796665,nssv1794031,nssv1796676,nssv1796708,nssv1796662,nssv1794019,nssv1794046,nssv1796694,nssv1796685,nssv1796706,nssv1796667,nssv1796688,nssv1796675,nssv1794034,nssv1794022,nssv1796687,nssv1796697,nssv1796710,nssv1794050,nssv1796707,nssv1796693,nssv1796696,nssv1796661,nssv1794052,nssv1796711,nssv1794058,nssv1794036,nssv1794053,nssv1794028,nssv1796704,nssv1796691,nssv1794024,nssv1794020,nssv1796713,nssv1794051,nssv1794025,nssv1794059 M 97 10 0 LINC00623,LINC00869,PPIAL4A,PPIAL4C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv21909 1 147776324 148068446 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18420,esv18080,esv19635,esv18658,esv17065 M 40 35 0 FCGR1A,HIST2H2BF,HIST2H3D,LINC00623,LINC00869,PPIAL4A,PPIAL4C NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12878,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv3894167 1 147779233 147856593 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25792183,essv25792251,essv25790278,essv25790472,essv25792392,essv25791055,essv25790729 M 3017 7 0 LINC00623,LINC00869,PPIAL4A,PPIAL4C nsv547840 1 147779233 147872275 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723487 M 17421 1 0 LINC00623,LINC00869,PPIAL4A,PPIAL4C esv999046 1 147780847 147858954 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586719 M 3 0 1 LINC00623,LINC00869,PPIAL4A,PPIAL4C HuRef nsv947045 1 147802644 147816981 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605073,nssv2605068,nssv2605074,nssv2605071,nssv2605076,nssv2605075,nssv2605077,nssv2605072,nssv2605070,nssv2605067,nssv2605069 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547841 1 147804338 147849072 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723488 M 17421 0 1 LINC00623,LINC00869,PPIAL4A,PPIAL4C nsv547842 1 147815318 147834581 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723491,nssv723490,nssv723489,nssv723492,nssv723494,nssv723493 M 17421 0 6 PPIAL4A,PPIAL4C nsv947046 1 147821950 147862690 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605078,nssv2605088,nssv2605082,nssv2605080,nssv2605083,nssv2605085,nssv2605079,nssv2605087,nssv2605086,nssv2605084,nssv2605081 M 97 10 0 LINC00623,LINC00869 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831492 1 147840444 148001850 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450239,nssv1450250 M 95 2 0 LINC00623,LINC00869 nsv508035 1 147843005 147849005 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618506 M 4 0 0 LINC00623,LINC00869 CHM dgv73n67 1 147847659 148049427 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824542,nsv824531,nsv824553 M 31 3 0 FCGR1A,HIST2H2BF,LINC00623,LINC00869 AK18,NA18564,NA18582 nsv824564 1 147847659 148081740 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426414 M 31 1 0 FCGR1A,HIST2H2AA3,HIST2H2AA4,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B,LINC00623,LINC00869 AK6 nsv946370 1 147875425 147889783 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1794089,nssv1794086,nssv1794079,nssv1795044,nssv1794065,nssv1795045,nssv1794081,nssv1795042,nssv1794068,nssv1795046,nssv1794085,nssv1795047,nssv1794062,nssv1794098,nssv1794077,nssv1795039,nssv1795061,nssv1795041,nssv1794091,nssv1794103,nssv1794061,nssv1795049,nssv1795069,nssv1795048,nssv1795068,nssv1795052,nssv1794075,nssv1794106,nssv1794082,nssv1795071,nssv1795064,nssv1794097,nssv1795065,nssv1795074,nssv1794080,nssv1794107,nssv1795066,nssv1794099,nssv1794071,nssv1795040,nssv1794088,nssv1795056,nssv1794078,nssv1795072,nssv1794064,nssv1795034,nssv1795070,nssv1795037,nssv1794074,nssv1794093,nssv1795063,nssv1794100,nssv1795062,nssv1794083,nssv1794066,nssv1795035,nssv1794063,nssv1795043,nssv1794072,nssv1794101,nssv1795067,nssv1795080,nssv1794073,nssv1795073,nssv1794069,nssv1794087,nssv1794084,nssv1794095,nssv1794067,nssv1795078,nssv1794070,nssv1795053,nssv1794076,nssv1795036,nssv1795033,nssv1794102,nssv1795051,nssv1795050,nssv1794094,nssv1794090,nssv1795076,nssv1795057,nssv1795054,nssv1794060,nssv1795055,nssv1795060,nssv1795079,nssv1795075,nssv1794104,nssv1795032,nssv1794105,nssv1794096,nssv1795058,nssv1795038,nssv1795077,nssv1795059,nssv1794092 M 97 10 0 LINC00623,LINC00869 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8313 1 147883281 147884600 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv26195,nssv21411,nssv21416 M 31 0 3 LINC00623,LINC00869 NA18860,NA19007,NA19221 nsv946371 1 147889783 147893286 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1795103,nssv1795107,nssv1797059,nssv1795113,nssv1795097,nssv1797028,nssv1795086,nssv1797043,nssv1795093,nssv1797035,nssv1795084,nssv1795111,nssv1795090,nssv1797050,nssv1795094,nssv1795119,nssv1795089,nssv1795116,nssv1795102,nssv1795118,nssv1797055,nssv1797027,nssv1797062,nssv1797045,nssv1795100,nssv1797037,nssv1797058,nssv1797047,nssv1795098,nssv1797039,nssv1795085,nssv1797040,nssv1797056,nssv1797024,nssv1795096,nssv1797033,nssv1797064,nssv1797026,nssv1797061,nssv1797031,nssv1795083,nssv1795114,nssv1795106,nssv1797046,nssv1797060,nssv1797042,nssv1795095,nssv1797051,nssv1795082,nssv1797029,nssv1795112,nssv1795115,nssv1795092,nssv1797044,nssv1797057,nssv1795117,nssv1795087,nssv1795108,nssv1795109,nssv1797049,nssv1795088,nssv1797036,nssv1795091,nssv1797054,nssv1795105,nssv1797041,nssv1795099,nssv1795081,nssv1795110,nssv1797038,nssv1795101,nssv1797034,nssv1797063,nssv1797052,nssv1797048,nssv1797025,nssv1797032,nssv1795104,nssv1797030,nssv1797053 M 97 10 0 LINC00869 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508036 1 147890771 147896771 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621478,nssv622295,nssv618507 M 4 0 0 LINC00869 CHM,NA10860,NA15510 nsv946372 1 147893286 147917959 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797090,nssv1797114,nssv1797082,nssv1797088,nssv1797075,nssv1797134,nssv1797076,nssv1797118,nssv1797146,nssv1797133,nssv1797147,nssv1797141,nssv1797079,nssv1797136,nssv1797078,nssv1797138,nssv1797094,nssv1797101,nssv1797081,nssv1797105,nssv1797067,nssv1797121,nssv1797077,nssv1797100,nssv1797142,nssv1797097,nssv1797072,nssv1797160,nssv1797148,nssv1797108,nssv1797073,nssv1797123,nssv1797086,nssv1797115,nssv1797084,nssv1797159,nssv1797068,nssv1797111,nssv1797145,nssv1797137,nssv1797069,nssv1797125,nssv1797066,nssv1797130,nssv1797083,nssv1797095,nssv1797151,nssv1797117,nssv1797080,nssv1797127,nssv1797149,nssv1797120,nssv1797144,nssv1797131,nssv1797143,nssv1797135,nssv1797087,nssv1797140,nssv1797093,nssv1797107,nssv1797096,nssv1797156,nssv1797074,nssv1797154,nssv1797085,nssv1797119,nssv1797071,nssv1797152,nssv1797089,nssv1797106,nssv1797070,nssv1797126,nssv1797150,nssv1797109,nssv1797103,nssv1797122,nssv1797104,nssv1797113,nssv1797153,nssv1797129,nssv1797092,nssv1797091,nssv1797157,nssv1797116,nssv1797098,nssv1797155,nssv1797139,nssv1797102,nssv1797128,nssv1797124,nssv1797112,nssv1797099,nssv1797161,nssv1797110,nssv1797158,nssv1797132,nssv1797065 M 97 10 0 LINC00869 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8325 1 147897271 147898555 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv24905 M 31 0 1 LINC00869 NA19173 nsv831503 1 147907267 148087465 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450484,nssv1450407,nssv1450429,nssv1450394,nssv1450383,nssv1450418,nssv1450350,nssv1450295,nssv1450361,nssv1450261,nssv1450306,nssv1450339,nssv1450462,nssv1450317,nssv1450440,nssv1450451,nssv1450473,nssv1450272,nssv1450372,nssv1450495,nssv1450328,nssv1450283 M 95 22 0 FCGR1A,HIST2H2AA3,HIST2H2AA4,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B,LINC00869 nsv8336 1 147911430 147931350 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv22423,nssv20076,nssv23058,nssv21393,nssv19756,nssv23383,nssv25170 M 31 7 0 LINC00869 NA07029,NA07048,NA10863,NA18504,NA18517,NA18552,NA18563 nsv436741 1 147916417 147923330 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465846 M 2 1 0 LINC00869 NA18505 nsv831514 1 147920576 147979384 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450506,nssv1450529,nssv1450518,nssv1450540 M 95 4 0 LINC00869 nsv946373 1 147936465 147948193 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797179,nssv1797185,nssv1797181,nssv1797237,nssv1797176,nssv1797188,nssv1797169,nssv1797198,nssv1797178,nssv1797230,nssv1797243,nssv1797258,nssv1797177,nssv1797238,nssv1797167,nssv1797235,nssv1797245,nssv1797218,nssv1797174,nssv1797197,nssv1797239,nssv1797205,nssv1797246,nssv1797211,nssv1797191,nssv1797231,nssv1797170,nssv1797215,nssv1797183,nssv1797220,nssv1797187,nssv1797194,nssv1797175,nssv1797256,nssv1797164,nssv1797233,nssv1797242,nssv1797257,nssv1797163,nssv1797234,nssv1797166,nssv1797192,nssv1797180,nssv1797212,nssv1797248,nssv1797208,nssv1797184,nssv1797255,nssv1797173,nssv1797209,nssv1797165,nssv1797214,nssv1797244,nssv1797221,nssv1797190,nssv1797224,nssv1797240,nssv1797217,nssv1797182,nssv1797222,nssv1797171,nssv1797253,nssv1797186,nssv1797227,nssv1797172,nssv1797228,nssv1797168,nssv1797249,nssv1797247,nssv1797204,nssv1797193,nssv1797251,nssv1797241,nssv1797203,nssv1797250,nssv1797206,nssv1797210,nssv1797254,nssv1797196,nssv1797202,nssv1797207,nssv1797216,nssv1797229,nssv1797219,nssv1797201,nssv1797200,nssv1797195,nssv1797189,nssv1797213,nssv1797252,nssv1797162,nssv1797236,nssv1797199,nssv1797223,nssv1797226,nssv1797232,nssv1797225 M 97 10 0 LINC00869 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946374 1 147948193 147995307 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797262,nssv1797260,nssv1797268,nssv1797259,nssv1797266,nssv1797263,nssv1797265,nssv1797269,nssv1797261,nssv1797267,nssv1797264 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2777 1 147949001 148007267 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2514,nssv3361 M 9 0 2 "" NA12878,NA18555 nsv469694 1 147955476 148102904 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1675404,nssv1675279,nssv1675737 M 265 0 3 FCGR1A,HIST2H2AA3,HIST2H2AA4,HIST2H2BC,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B nsv831525 1 147968161 148144657 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450562,nssv1450551 M 95 2 0 BOLA1,FCGR1A,HIST2H2AA3,HIST2H2AA4,HIST2H2AB,HIST2H2AC,HIST2H2BC,HIST2H2BE,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B,SV2A nsv436629 1 147980066 147986333 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465847 M 2 0 1 "" NA18505 nsv160066 1 147981074 147984910 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178644 M 24 "" nsv946375 1 147995307 147996480 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797287,nssv1798265,nssv1797284,nssv1797296,nssv1797301,nssv1797270,nssv1798274,nssv1797329,nssv1797275,nssv1798282,nssv1797282,nssv1797307,nssv1798271,nssv1797319,nssv1797291,nssv1798258,nssv1797278,nssv1797315,nssv1797289,nssv1798284,nssv1797271,nssv1797310,nssv1798279,nssv1798257,nssv1798272,nssv1797293,nssv1797288,nssv1797317,nssv1797290,nssv1797304,nssv1797277,nssv1797326,nssv1797286,nssv1798259,nssv1797285,nssv1797323,nssv1797272,nssv1798281,nssv1797295,nssv1797302,nssv1797281,nssv1797306,nssv1797298,nssv1797300,nssv1797274,nssv1797305,nssv1797299,nssv1798262,nssv1798277,nssv1798260,nssv1797283,nssv1797320,nssv1797280,nssv1797313,nssv1797292,nssv1797297,nssv1798273,nssv1798269,nssv1798278,nssv1798288,nssv1798280,nssv1798268,nssv1797279,nssv1798285,nssv1798275,nssv1798283,nssv1797294,nssv1798263,nssv1797273,nssv1797328,nssv1797276,nssv1797330,nssv1798276,nssv1797325,nssv1798264,nssv1798261,nssv1797322,nssv1798287,nssv1798267,nssv1797316,nssv1798290,nssv1798289,nssv1797327,nssv1797314,nssv1798256,nssv1798286,nssv1797312,nssv1798266,nssv1797318,nssv1798270,nssv1797324,nssv1797303,nssv1797308,nssv1797309,nssv1797311,nssv1797331,nssv1797321 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946376 1 147996480 148049730 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798294,nssv1798301,nssv1798297,nssv1798299,nssv1798298,nssv1798292,nssv1798293,nssv1798291,nssv1798300,nssv1798296,nssv1798295 M 97 10 0 FCGR1A,HIST2H2BF HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8347 1 148017262 148020194 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19745,nssv20086 M 31 2 0 "" NA10847,NA18552 esv1007634 1 148038750 148120218 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564759 M 3 0 0 HIST2H2AA3,HIST2H2AA4,HIST2H2BC,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B HuRef nsv7182 1 148039862 148133136 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1527,nssv7042,nssv7036,nssv2522,nssv11074 M 9 0 0 HIST2H2AA3,HIST2H2AA4,HIST2H2AB,HIST2H2AC,HIST2H2BC,HIST2H2BE,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H4A,HIST2H4B NA12156,NA15510,NA18555,NA19240 nsv946377 1 148049730 148051026 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798330,nssv1798394,nssv1798319,nssv1798347,nssv1798316,nssv1798336,nssv1798306,nssv1798356,nssv1798322,nssv1798338,nssv1798383,nssv1798340,nssv1798307,nssv1798325,nssv1798313,nssv1798373,nssv1798303,nssv1798390,nssv1798379,nssv1798359,nssv1798310,nssv1798357,nssv1798380,nssv1798363,nssv1798321,nssv1798342,nssv1798323,nssv1798361,nssv1798327,nssv1798351,nssv1798382,nssv1798367,nssv1798320,nssv1798334,nssv1798388,nssv1798392,nssv1798331,nssv1798344,nssv1798317,nssv1798365,nssv1798308,nssv1798360,nssv1798312,nssv1798343,nssv1798304,nssv1798389,nssv1798305,nssv1798366,nssv1798386,nssv1798346,nssv1798384,nssv1798349,nssv1798315,nssv1798341,nssv1798314,nssv1798368,nssv1798385,nssv1798345,nssv1798387,nssv1798376,nssv1798381,nssv1798370,nssv1798309,nssv1798332,nssv1798333,nssv1798391,nssv1798326,nssv1798372,nssv1798318,nssv1798393,nssv1798311,nssv1798352,nssv1798324,nssv1798355,nssv1798377,nssv1798348,nssv1798358,nssv1798395,nssv1798369,nssv1798378,nssv1798302,nssv1798375,nssv1798353,nssv1798374,nssv1798328,nssv1798371,nssv1798335,nssv1798337,nssv1798398,nssv1798396,nssv1798354,nssv1798350,nssv1798397,nssv1798339,nssv1798329,nssv1798364,nssv1798362 M 97 10 0 HIST2H2BF HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946378 1 148052219 148059601 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798408,nssv1798403,nssv1798402,nssv1798400,nssv1798406,nssv1798409,nssv1798405,nssv1798404,nssv1798401,nssv1798407,nssv1798399 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946379 1 148059601 148082040 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797355,nssv1797362,nssv1798427,nssv1797342,nssv1797353,nssv1798433,nssv1798411,nssv1797340,nssv1798415,nssv1797339,nssv1797356,nssv1797335,nssv1798438,nssv1798462,nssv1797349,nssv1798458,nssv1798441,nssv1798448,nssv1798421,nssv1797347,nssv1798422,nssv1798436,nssv1798412,nssv1798437,nssv1798418,nssv1798464,nssv1798424,nssv1798465,nssv1797352,nssv1797345,nssv1798429,nssv1798446,nssv1798416,nssv1798453,nssv1798431,nssv1798444,nssv1797354,nssv1797348,nssv1797358,nssv1798450,nssv1798414,nssv1798467,nssv1798428,nssv1797367,nssv1798425,nssv1798442,nssv1798420,nssv1798459,nssv1798435,nssv1797343,nssv1797350,nssv1798468,nssv1798413,nssv1797341,nssv1798419,nssv1798456,nssv1798439,nssv1797346,nssv1798423,nssv1798454,nssv1798434,nssv1798445,nssv1798426,nssv1798469,nssv1797357,nssv1798455,nssv1798432,nssv1798463,nssv1798430,nssv1798440,nssv1797351,nssv1797366,nssv1798417,nssv1798449,nssv1797344,nssv1797368,nssv1798457,nssv1797332,nssv1798451,nssv1797337,nssv1797359,nssv1797334,nssv1798452,nssv1797364,nssv1797336,nssv1797338,nssv1798460,nssv1797363,nssv1798461,nssv1798466,nssv1798410,nssv1798443,nssv1797361,nssv1797365,nssv1797360,nssv1797333,nssv1798447 M 97 10 0 HIST2H2AA3,HIST2H2AA4,HIST2H3A,HIST2H3C,HIST2H4A,HIST2H4B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547843 1 148065230 148085090 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723495 M 17421 0 1 HIST2H2AA3,HIST2H2AA4,HIST2H3A,HIST2H3C,HIST2H4A,HIST2H4B nsv499132 1 148081703 148109486 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585489 M 9 0 0 HIST2H2AA3,HIST2H2AA4,HIST2H2BC,HIST2H3A,HIST2H3C,HIST2H4A,HIST2H4B nsv946381 1 148088173 148108730 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797453,nssv1797459,nssv1797454,nssv1797443,nssv1797450,nssv1797392,nssv1797383,nssv1797461,nssv1797374,nssv1797413,nssv1797381,nssv1797409,nssv1797446,nssv1797432,nssv1797400,nssv1797426,nssv1797389,nssv1797433,nssv1797378,nssv1797407,nssv1797377,nssv1797406,nssv1797384,nssv1797436,nssv1797388,nssv1797369,nssv1797452,nssv1797414,nssv1797390,nssv1797444,nssv1797449,nssv1797430,nssv1797398,nssv1797410,nssv1797376,nssv1797395,nssv1797385,nssv1797401,nssv1797387,nssv1797437,nssv1797451,nssv1797416,nssv1797455,nssv1797403,nssv1797373,nssv1797442,nssv1797397,nssv1797418,nssv1797394,nssv1797465,nssv1797382,nssv1797425,nssv1797386,nssv1797445,nssv1797380,nssv1797422,nssv1797370,nssv1797405,nssv1797391,nssv1797439,nssv1797447,nssv1797404,nssv1797371,nssv1797419,nssv1797372,nssv1797424,nssv1797393,nssv1797464,nssv1797448,nssv1797427,nssv1797375,nssv1797399,nssv1797379,nssv1797428,nssv1797438,nssv1797441,nssv1797421,nssv1797440,nssv1797463,nssv1797412,nssv1797434,nssv1797429,nssv1797396,nssv1797420,nssv1797456,nssv1797435,nssv1797402,nssv1797431,nssv1797415,nssv1797408,nssv1797458,nssv1797417,nssv1797462,nssv1797457,nssv1797460,nssv1797423,nssv1797411 M 97 10 0 HIST2H2AA3,HIST2H2AA4,HIST2H2BC,HIST2H3A,HIST2H3C,HIST2H4A,HIST2H4B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv46 1 148088263 148119731 OTHER inversion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv46 M 1 0 0 HIST2H2AA3,HIST2H2AA4,HIST2H2BC,HIST2H3A,HIST2H3C,HIST2H4A,HIST2H4B NA15510 nsv831537 1 148099981 148331279 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450573 M 95 0 1 BOLA1,HIST2H2AB,HIST2H2AC,HIST2H2BE,MTMR11,OTUD7B,SF3B4,SV2A,VPS45 nsv946382 1 148123928 148125900 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797483,nssv1797520,nssv1797491,nssv1797493,nssv1797547,nssv1797501,nssv1797497,nssv1797555,nssv1797477,nssv1797540,nssv1797480,nssv1797530,nssv1797478,nssv1797466,nssv1797471,nssv1797500,nssv1797495,nssv1797557,nssv1797545,nssv1797499,nssv1797543,nssv1797533,nssv1797474,nssv1797517,nssv1797550,nssv1797505,nssv1797487,nssv1797514,nssv1797485,nssv1797508,nssv1797549,nssv1797523,nssv1797546,nssv1797558,nssv1797473,nssv1797527,nssv1797486,nssv1797492,nssv1797494,nssv1797541,nssv1797482,nssv1797511,nssv1797484,nssv1797506,nssv1797470,nssv1797512,nssv1797552,nssv1797556,nssv1797479,nssv1797510,nssv1797469,nssv1797489,nssv1797551,nssv1797539,nssv1797488,nssv1797513,nssv1797481,nssv1797534,nssv1797467,nssv1797498,nssv1797472,nssv1797529,nssv1797468,nssv1797515,nssv1797475,nssv1797542,nssv1797548,nssv1797503,nssv1797490,nssv1797496,nssv1797476,nssv1797516,nssv1797544,nssv1797519,nssv1797525,nssv1797502,nssv1797559,nssv1797524,nssv1797536,nssv1797521,nssv1797522,nssv1797535,nssv1797537,nssv1797561,nssv1797507,nssv1797526,nssv1797560,nssv1797518,nssv1797538,nssv1797562,nssv1797553,nssv1797531,nssv1797504,nssv1797532,nssv1797554,nssv1797509,nssv1797528 M 97 10 0 HIST2H2AB,HIST2H2AC,HIST2H2BE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508037 1 148155374 148161374 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618508 M 4 0 0 SV2A CHM nsv472725 1 148215360 148215360 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019229 M 9 1 0 OTUD7B NA18555 nsv8358 1 148242418 148243695 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25444 M 31 1 0 OTUD7B NA12155 nsv8369 1 148261641 148263312 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv19105,nssv25450,nssv21753,nssv21762,nssv23368,nssv20757,nssv20737,nssv25185,nssv19419 M 31 0 9 "" NA07029,NA07048,NA11830,NA12740,NA18502,NA18517,NA18980,NA19132,NA19173 nsv946383 1 148292618 148293599 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797580,nssv1797625,nssv1798880,nssv1797615,nssv1797577,nssv1797604,nssv1797575,nssv1797612,nssv1797568,nssv1798884,nssv1797572,nssv1797595,nssv1798876,nssv1797637,nssv1798872,nssv1797630,nssv1798873,nssv1797596,nssv1797564,nssv1797617,nssv1797566,nssv1797590,nssv1797591,nssv1797614,nssv1797583,nssv1798891,nssv1797582,nssv1797626,nssv1797584,nssv1797563,nssv1797574,nssv1797607,nssv1798874,nssv1797624,nssv1798877,nssv1797603,nssv1797581,nssv1797638,nssv1797567,nssv1797601,nssv1797594,nssv1798883,nssv1798875,nssv1797620,nssv1797570,nssv1798889,nssv1797569,nssv1797627,nssv1797571,nssv1797589,nssv1798881,nssv1797622,nssv1798879,nssv1797611,nssv1797588,nssv1797586,nssv1797576,nssv1797605,nssv1797578,nssv1797602,nssv1797579,nssv1798890,nssv1798878,nssv1797636,nssv1797565,nssv1797600,nssv1797585,nssv1797606,nssv1797587,nssv1798887,nssv1797573,nssv1797610,nssv1797592,nssv1797639,nssv1797608,nssv1798882,nssv1797619,nssv1797613,nssv1797616,nssv1797631,nssv1798888,nssv1797593,nssv1797598,nssv1797618,nssv1797609,nssv1797633,nssv1798886,nssv1797628,nssv1797634,nssv1797621,nssv1798885,nssv1797635,nssv1797629,nssv1797599,nssv1797632,nssv1797597,nssv1797623 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2021360 1 148304282 148304733 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4967437 M 1 0 1 "" NA18507 esv993878 1 148304472 148304527 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571411 M 3 0 1 "" HuRef esv1213532 1 148304476 148304532 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3675460 M 2 0 1 "" HuRef nsv160821 1 148304477 148304532 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179399 M 24 "" esv2605621 1 148312730 148314268 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5310051 M 1 0 1 VPS45 NA18507 esv2061124 1 148313433 148314047 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4928106 M 1 0 1 VPS45 NA18507 esv3395116 1 148466745 148466764 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596379,essv9596401,essv9596390 M 185 3 0 ANP32E NA07347,NA11894,NA12287 esv3389799 1 148470534 148470534 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823037 M 185 1 0 ANP32E NA12878 esv3377218 1 148470582 148470582 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863770 M 185 1 0 ANP32E NA11992 nsv1009508 1 148477736 148537454 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487265 M 29084 0 1 APH1A,C1orf51,C1orf54,CA14,MRPS21 nsv1011223 1 148495829 148546004 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490981 M 29084 1 0 APH1A,C1orf51,C1orf54,CA14,MRPS21 nsv831548 1 148535332 148702340 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450584,nssv1450595 M 95 0 2 MRPS21,PRPF3,RPRD2 nsv479267 1 148566716 148566716 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018242 M 9 0 0 PRPF3 dgv414n100 1 148595100 148716449 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004099,nsv999536,nsv1004385,nsv998186 M 29084 4 0 RPRD2 esv2540817 1 148649905 148651451 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5361304 M 1 0 1 RPRD2 NA18507 esv989789 1 148650194 148650888 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563716 M 3 0 1 RPRD2 HuRef esv274946 1 148654494 148656678 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585625 M 1250 0 1 RPRD2 esv999047 1 148672931 148672931 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573145 M 3 1 0 RPRD2 HuRef nsv1006838 1 148692565 148989407 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491726 M 29084 1 0 ADAMTSL4,ADAMTSL4-AS1,CTSS,ECM1,ENSA,GOLPH3L,HORMAD1,LINC00568,MCL1,MIR4257,MIR6878,RPRD2,TARS2 nsv474173 1 148720076 148720076 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015479 M 9 1 0 "" NA18507 nsv527379 1 148793978 148808752 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703811 M 2026 0 1 ADAMTSL4,ADAMTSL4-AS1 nsv946384 1 148833970 148845711 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798909,nssv1798968,nssv1798908,nssv1798925,nssv1798911,nssv1798963,nssv1798971,nssv1798948,nssv1798976,nssv1798965,nssv1798975,nssv1798939,nssv1798899,nssv1798960,nssv1798897,nssv1798981,nssv1798921,nssv1798934,nssv1798973,nssv1798936,nssv1798912,nssv1798922,nssv1798920,nssv1798945,nssv1798894,nssv1798892,nssv1798904,nssv1798962,nssv1798969,nssv1798961,nssv1798907,nssv1798986,nssv1798902,nssv1798988,nssv1798900,nssv1798931,nssv1798901,nssv1798954,nssv1798906,nssv1798938,nssv1798913,nssv1798919,nssv1798903,nssv1798943,nssv1798895,nssv1798980,nssv1798972,nssv1798964,nssv1798910,nssv1798942,nssv1798977,nssv1798933,nssv1798917,nssv1798984,nssv1798896,nssv1798947,nssv1798978,nssv1798941,nssv1798893,nssv1798940,nssv1798923,nssv1798951,nssv1798914,nssv1798950,nssv1798898,nssv1798932,nssv1798974,nssv1798952,nssv1798916,nssv1798918,nssv1798970,nssv1798937,nssv1798905,nssv1798987,nssv1798929,nssv1798930,nssv1798957,nssv1798982,nssv1798915,nssv1798944,nssv1798924,nssv1798953,nssv1798928,nssv1798946,nssv1798958,nssv1798979,nssv1798926,nssv1798966,nssv1798956,nssv1798935,nssv1798955,nssv1798985,nssv1798927,nssv1798983,nssv1798959,nssv1798967,nssv1798949 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv24209 1 148867816 148868930 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16022 M 40 0 1 ENSA NA12239 esv2427260 1 148885258 148886772 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5264499 M 1 0 1 GOLPH3L NA18507 nsv1014638 1 148914611 148945657 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497886 M 29084 1 0 GOLPH3L,HORMAD1 nsv437158 1 148918826 148950136 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467039 M 60 0 1 GOLPH3L,HORMAD1 NA12753 nsv520425 1 148936576 148940308 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv671343,nssv678859 M 2026 0 2 HORMAD1 esv2761795 1 148939988 148941071 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6998111 M 1109 0 1 HORMAD1 SW_1192 nsv528859 1 148940308 148942107 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705538 M 2026 0 1 HORMAD1 esv2570262 1 148948199 148949704 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5166946 M 1 0 1 HORMAD1 NA18507 esv2609983 1 148957357 148958940 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5338574 M 1 0 1 HORMAD1 NA18507 esv2238986 1 148957867 148958589 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4877414 M 1 0 1 HORMAD1 NA18507 esv9188 1 148957876 148958645 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31629 M 1 0 0 HORMAD1 esv3600 1 148958026 148958489 CNV loss Wang_et_al_2008 18987735 Sequencing essv26041 M 1 0 1 HORMAD1 YH esv992009 1 148958060 148958393 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568671 M 3 0 1 HORMAD1 HuRef esv2482983 1 148958064 148958397 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5379373 M 1 0 1 HORMAD1 NA18507 esv1594619 1 148958075 148958409 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3650548 M 2 0 1 HORMAD1 HuRef esv3306752 1 148963269 148963270 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7753040,essv7742711,essv7761118,essv7749762,essv7742927,essv7742305,essv7752854,essv7757551,essv7743868 M 185 9 0 "" NA07346,NA07347,NA12287,NA12749,NA18505,NA18511,NA18519,NA18964,NA19093 esv3377716 1 148963274 148963326 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901366,essv8901364,essv8901362,essv8901365,essv8901360,essv8901358,essv8901367,essv8901361,essv8901363 M 185 9 0 "" NA07346,NA07347,NA12287,NA12749,NA18505,NA18511,NA18519,NA18964,NA19093 esv1299298 1 148982717 148983258 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4241887 M 2 0 1 CTSS HuRef esv1542672 1 148983446 148983553 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4157126 M 2 0 1 CTSS HuRef nsv1008381 1 148987878 149012182 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495939 M 29084 1 0 CTSS nsv437169 1 149004821 149083510 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467050 M 60 0 1 ARNT,CTSK,CTSS NA12753 nsv2788 1 149021958 149067409 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7052 M 9 0 1 ARNT,CTSK NA12156 nsv2799 1 149030823 149045059 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3372 M 9 1 0 CTSK NA12878 nsv160180 1 149031900 149039294 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178758 M 24 CTSK nsv1010875 1 149063440 149112451 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493333 M 29084 1 0 ARNT esv5926 1 149084381 149084583 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28367 M 1 0 0 ARNT nsv2810 1 149101797 149146493 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7643 M 9 0 1 ARNT NA12156 esv3353935 1 149105825 149105825 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653220,essv8653222,essv8653221 M 185 3 0 ARNT NA19238,NA19239,NA19240 nsv1008496 1 149112451 149237280 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705031 M 29084 1 0 ANXA9,ARNT,CERS2,FAM63A,SETDB1 nsv547844 1 149124179 149129391 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723496 M 17421 0 1 "" esv26053 1 149126912 149129465 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11698 M 40 0 1 "" NA12776 nsv547845 1 149127095 149129391 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723500,nssv723497,nssv723498,nssv723499,nssv723502,nssv723501,nssv723503 M 17421 0 7 "" dgv563n54 1 149128177 149129391 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547847,nsv547846 M 17421 0 3 "" nsv547848 1 149128584 149129391 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723507,nssv723512,nssv723508,nssv723511,nssv723513,nssv723509,nssv723510,nssv723514 M 17421 0 8 "" nsv946385 1 149142128 149144739 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799014,nssv1799032,nssv1799008,nssv1799060,nssv1799006,nssv1799051,nssv1799066,nssv1799040,nssv1799011,nssv1796716,nssv1798991,nssv1799038,nssv1798994,nssv1799064,nssv1799070,nssv1799079,nssv1798999,nssv1799053,nssv1799000,nssv1799078,nssv1798996,nssv1799052,nssv1799017,nssv1799054,nssv1798997,nssv1799056,nssv1799004,nssv1799019,nssv1799010,nssv1799033,nssv1799018,nssv1799022,nssv1799069,nssv1799016,nssv1799071,nssv1799062,nssv1799007,nssv1799031,nssv1799003,nssv1799045,nssv1798993,nssv1799035,nssv1799020,nssv1799048,nssv1799005,nssv1799058,nssv1799001,nssv1799030,nssv1799075,nssv1799036,nssv1799073,nssv1799042,nssv1798990,nssv1799059,nssv1799067,nssv1798989,nssv1799068,nssv1799077,nssv1798992,nssv1796720,nssv1798995,nssv1799028,nssv1799002,nssv1799021,nssv1799074,nssv1799080,nssv1799072,nssv1799029,nssv1799013,nssv1799061,nssv1799009,nssv1796717,nssv1798998,nssv1799049,nssv1799044,nssv1799023,nssv1799015,nssv1799039,nssv1799034,nssv1796719,nssv1799065,nssv1799047,nssv1796718,nssv1799037,nssv1799057,nssv1799046,nssv1799041,nssv1799055,nssv1799027,nssv1799050,nssv1799026,nssv1799012,nssv1799025,nssv1799076,nssv1799043,nssv1799024,nssv1799063 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv477720 1 149162616 149162616 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015754 M 9 1 0 "" NA18517 nsv522317 1 149200347 149240786 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695097 M 2026 0 1 ANXA9,CERS2,FAM63A,SETDB1 nsv522840 1 149200347 149614370 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698492 M 2026 1 0 ANXA9,BNIPL,C1orf56,CDC42SE1,CERS2,FAM63A,GABPB2,LYSMD1,MLLT11,PI4KB,PIP5K1A,PRUNE,PSMD4,RFX5,SCNM1,SELENBP1,SEMA6C,SETDB1,TMOD4,TNFAIP8L2,TNFAIP8L2-SCNM1,VPS72,ZNF687 esv1745722 1 149279705 149279705 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3884163 M 2 1 0 BNIPL HuRef nsv472328 1 149337102 149337102 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018180 M 9 1 0 GABPB2 NA18555 dgv2n68 1 149376083 149548402 CNV loss Wong_et_al_2007 17160897 BAC aCGH nsv831559,nsv831570 M 95 0 3 LYSMD1,PI4KB,PIP5K1A,PSMD4,SCNM1,SEMA6C,TMOD4,TNFAIP8L2,TNFAIP8L2-SCNM1,VPS72,ZNF687 esv34461 1 149507166 149678259 CNV gain Pinto_et_al_2007 17911159 SNP array essv6979360,essv6990355 M 771 2 0 PI4KB,POGZ,PSMB4,RFX5,SELENBP1,ZNF687 NA18537 nsv2821 1 149537748 149568583 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7059 M 9 1 0 PI4KB NA12156 nsv831581 1 149555775 149745229 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450640 M 95 0 1 PI4KB,POGZ,PSMB4,RFX5,SELENBP1 esv25158 1 149557942 149560422 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16335 M 40 1 0 PI4KB NA18505 nsv438026 1 149585357 149611327 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468230,nssv468219 M 269 0 2 RFX5,SELENBP1 NA18853,NA18854 esv2758969 1 149595418 149678259 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756864 M 270 5 0 POGZ,PSMB4,SELENBP1 NA18537,NA18561,NA18959,NA18998,NA19007 nsv8380 1 149596511 149676970 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv20745,nssv21776 M 31 2 0 POGZ,PSMB4,SELENBP1 NA18537,NA19007 nsv824575 1 149598157 149674720 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1439481 M 31 1 0 POGZ,PSMB4,SELENBP1 NA18537 nsv470737 1 149599791 149671472 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547771,nssv547769,nssv547770 M 443 3 0 POGZ,PSMB4,SELENBP1 HGDP00714,HGDP01185,HGDP01305 nsv818467 1 149599791 149671472 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417131,nssv1417433 M 112 2 0 POGZ,PSMB4,SELENBP1 NA18537,NA18952 esv3894200 1 149599791 149674317 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25787949,essv25792917,essv25789267,essv25789586,essv25789352,essv25787856,essv25789271,essv25789199,essv25788884,essv25789512,essv25788138,essv25789609 M 3017 12 0 POGZ,PSMB4,SELENBP1 dgv36n27 1 149599791 149679804 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463839,nsv463783,nsv463794,nsv463827,nsv463805,nsv463761,nsv463816,nsv463772 M 1557 8 0 POGZ,PSMB4,SELENBP1 HGDP00127,HGDP00714,HGDP00782,HGDP00964,HGDP01185,HGDP01305,HGDP01308,HGDP01311 dgv564n54 1 149599791 149679804 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547850,nsv547849,nsv547851 M 17421 8 0 POGZ,PSMB4,SELENBP1 HGDP00127,HGDP00714,HGDP00782,HGDP00964,HGDP01185,HGDP01305,HGDP01308,HGDP01311 nsv441714 1 149603323 149664502 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656762,nssv1656764,nssv1656760,nssv1656763,nssv1656761,nssv1656765 M 270 6 0 POGZ,PSMB4,SELENBP1 NA18537,NA18561,NA18952,NA18959,NA18998,NA19007 esv3890638 1 149637929 149674316 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788267,essv25787794 M 3017 2 0 POGZ,PSMB4 nsv478069 1 149671581 149671581 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018049 M 9 1 0 POGZ NA18517 nsv2832 1 149684882 149718464 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1545 M 9 1 0 POGZ NA19240 nsv824587 1 149690655 149692635 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1424767 M 31 0 1 POGZ AK2 nsv997511 1 149758389 149862526 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705032 M 29084 1 0 CGN,MIR554,SNX27,TUFT1 nsv522757 1 149787355 149788557 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698396 M 2026 0 1 TUFT1 nsv946387 1 149788500 149796885 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796779,nssv1796741,nssv1796813,nssv1796802,nssv1796773,nssv1796807,nssv1796765,nssv1796805,nssv1796754,nssv1796729,nssv1796771,nssv1796801,nssv1796782,nssv1796732,nssv1796816,nssv1796745,nssv1796815,nssv1796725,nssv1796786,nssv1796743,nssv1796778,nssv1796731,nssv1796794,nssv1796804,nssv1796783,nssv1796727,nssv1796766,nssv1796744,nssv1796785,nssv1796728,nssv1796763,nssv1796742,nssv1796772,nssv1796810,nssv1796762,nssv1796737,nssv1796758,nssv1796746,nssv1796761,nssv1796734,nssv1796814,nssv1796753,nssv1796781,nssv1796808,nssv1796757,nssv1796809,nssv1796788,nssv1796755,nssv1796790,nssv1796733,nssv1796811,nssv1796740,nssv1796768,nssv1796749,nssv1796812,nssv1796726,nssv1796724,nssv1796739,nssv1796777,nssv1796803,nssv1796793,nssv1796806,nssv1796776,nssv1796730,nssv1796769,nssv1796736,nssv1796775,nssv1796748,nssv1796764,nssv1796752,nssv1796791,nssv1796735,nssv1796747,nssv1796738,nssv1796796,nssv1796820,nssv1796792,nssv1796770,nssv1796751,nssv1796759,nssv1796756,nssv1796798,nssv1796787,nssv1796780,nssv1796760,nssv1796789,nssv1796750,nssv1796800,nssv1796799,nssv1796797,nssv1796774,nssv1796818,nssv1796819,nssv1796767,nssv1796795,nssv1796784,nssv1796817 M 97 10 0 TUFT1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1185841 1 149839907 149839957 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4121194 M 2 0 1 "" HuRef esv1721931 1 149839970 149840092 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4160875 M 2 0 1 "" HuRef nsv2843 1 149866693 149911333 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7656 M 9 0 1 SNX27 NA12156 esv2371131 1 150019172 150019613 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4766823 M 1 0 1 TDRKH NA18507 nsv1010398 1 150028273 150057564 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493239 M 29084 1 0 LINGO4,RORC,TDRKH nsv516369 1 150046801 150086948 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv667816,nssv672480,nssv694803 M 2026 3 0 C2CD4D,LOC100132111,RORC,THEM5 nsv476116 1 150053581 150053581 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014429 M 9 1 0 RORC NA12878 nsv160848 1 150056233 150063393 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179426 M 24 RORC nsv1007097 1 150099420 150494601 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705033 M 29084 1 0 HRNR,NBPF18P,RPTN,S100A10,S100A11,TCHH,TCHHL1,THEM4 nsv547852 1 150109668 150221854 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723515 M 17421 0 1 THEM4 nsv946388 1 150189276 150189776 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796838,nssv1796882,nssv1796905,nssv1796854,nssv1796828,nssv1796912,nssv1796902,nssv1796886,nssv1796836,nssv1796881,nssv1796841,nssv1796851,nssv1796901,nssv1796883,nssv1796824,nssv1796875,nssv1796826,nssv1796873,nssv1796830,nssv1796910,nssv1796832,nssv1796863,nssv1796898,nssv1796885,nssv1796829,nssv1796891,nssv1796831,nssv1796860,nssv1796822,nssv1796869,nssv1796899,nssv1796862,nssv1796900,nssv1796878,nssv1796842,nssv1796913,nssv1796840,nssv1796876,nssv1796850,nssv1796865,nssv1796903,nssv1796870,nssv1796825,nssv1796855,nssv1796907,nssv1796861,nssv1796839,nssv1796887,nssv1796843,nssv1796908,nssv1796834,nssv1796880,nssv1796833,nssv1796859,nssv1796852,nssv1796909,nssv1796906,nssv1796911,nssv1796837,nssv1796858,nssv1796849,nssv1796866,nssv1796904,nssv1796872,nssv1796823,nssv1796892,nssv1796846,nssv1796868,nssv1796845,nssv1796874,nssv1796827,nssv1796889,nssv1796835,nssv1796895,nssv1796844,nssv1796884,nssv1796914,nssv1796848,nssv1796821,nssv1796856,nssv1796867,nssv1796888,nssv1796879,nssv1796877,nssv1796893,nssv1796853,nssv1796864,nssv1796857,nssv1796917,nssv1796915,nssv1796894,nssv1796871,nssv1796896,nssv1796897,nssv1796847,nssv1796890,nssv1796916 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2855 1 150203094 150233005 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7664 M 9 0 1 S100A10 NA12156 nsv946389 1 150254355 150262466 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1796921,nssv1796962,nssv1796935,nssv1796961,nssv1796924,nssv1796989,nssv1796928,nssv1796991,nssv1797001,nssv1796990,nssv1796923,nssv1796976,nssv1796938,nssv1796968,nssv1797002,nssv1796983,nssv1796995,nssv1796987,nssv1796933,nssv1796978,nssv1796927,nssv1796988,nssv1796920,nssv1796948,nssv1796926,nssv1797007,nssv1796937,nssv1796970,nssv1796939,nssv1796972,nssv1796919,nssv1796959,nssv1796997,nssv1796980,nssv1796998,nssv1796957,nssv1796931,nssv1796960,nssv1796996,nssv1796973,nssv1796922,nssv1796979,nssv1796936,nssv1796966,nssv1797000,nssv1797011,nssv1796943,nssv1797009,nssv1796940,nssv1797006,nssv1796934,nssv1796945,nssv1796925,nssv1796984,nssv1796946,nssv1796956,nssv1796930,nssv1797005,nssv1796949,nssv1796963,nssv1797003,nssv1797010,nssv1796999,nssv1796975,nssv1796947,nssv1796951,nssv1796942,nssv1796958,nssv1797004,nssv1796982,nssv1796929,nssv1796965,nssv1796932,nssv1797008,nssv1796977,nssv1796955,nssv1796952,nssv1796967,nssv1796969,nssv1796992,nssv1796964,nssv1796918,nssv1796986,nssv1796981,nssv1796941,nssv1796985,nssv1796971,nssv1797012,nssv1797013,nssv1796953,nssv1796954,nssv1796994,nssv1796950,nssv1797014,nssv1796944,nssv1796993,nssv1796974 M 97 10 0 NBPF18P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547853 1 150275295 150503384 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723516 M 17421 1 0 HRNR,RPTN,S100A11,TCHH,TCHHL1 nsv946390 1 150316941 150321730 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797967,nssv1798002,nssv1797956,nssv1798031,nssv1797018,nssv1797966,nssv1797954,nssv1798010,nssv1798020,nssv1797986,nssv1797020,nssv1798007,nssv1797953,nssv1797984,nssv1797022,nssv1798005,nssv1797017,nssv1797995,nssv1797951,nssv1797980,nssv1798016,nssv1797997,nssv1797948,nssv1797983,nssv1797023,nssv1798009,nssv1798024,nssv1798026,nssv1797016,nssv1797985,nssv1798017,nssv1797998,nssv1797958,nssv1797976,nssv1797960,nssv1797992,nssv1798019,nssv1797979,nssv1797968,nssv1798008,nssv1797949,nssv1798030,nssv1797019,nssv1798033,nssv1797959,nssv1797990,nssv1797957,nssv1797969,nssv1798018,nssv1798035,nssv1798025,nssv1798028,nssv1797950,nssv1797974,nssv1798022,nssv1798013,nssv1798023,nssv1798000,nssv1797952,nssv1797989,nssv1797970,nssv1798006,nssv1797955,nssv1798034,nssv1797964,nssv1798014,nssv1797961,nssv1798011,nssv1798021,nssv1797975,nssv1797963,nssv1797972,nssv1797021,nssv1798001,nssv1798012,nssv1798027,nssv1797999,nssv1798004,nssv1798032,nssv1797973,nssv1797982,nssv1797987,nssv1798015,nssv1797977,nssv1797991,nssv1797965,nssv1797993,nssv1797962,nssv1798029,nssv1797996,nssv1798003,nssv1797994,nssv1797015,nssv1797971,nssv1797988,nssv1797978,nssv1797981 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2866 1 150327470 150360018 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10264 M 9 1 0 TCHH,TCHHL1 NA18956 nsv438037 1 150346613 150350663 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468241,nssv468252 M 269 0 2 TCHH NA12707,NA12716 esv1225012 1 150347037 150347816 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3990659 M 2 0 1 TCHH HuRef esv2815 1 150347423 150347955 CNV loss Wang_et_al_2008 18987735 Sequencing essv25256 M 1 0 1 TCHH YH nsv1014095 1 150371110 150721215 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497307 M 29084 1 0 CRNN,FLG,FLG2,FLG-AS1,HRNR,RPTN nsv482125 1 150392695 150398328 CNV loss Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558486 M 1 0 1 RPTN KB1 esv2221423 1 150395511 150395931 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4709283 M 1 0 1 RPTN NA18507 nsv547854 1 150412285 150432502 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723517 M 17421 0 1 "" nsv509468 1 150426756 150538497 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619814,nssv623794,nssv621103 M 4 3 0 HRNR NA10860,NA15510,NA18994 nsv528426 1 150428359 150428730 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705019 M 2026 0 1 "" nsv2877 1 150430147 150472214 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11080,nssv3381,nssv7067,nssv2531 M 9 4 0 HRNR NA12156,NA12878,NA15510,NA18555 esv3391258 1 150447612 150447644 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863771 M 185 1 0 "" NA12005 nsv57 1 150449799 150453775 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv57 M 1 1 0 HRNR NA15510 nsv471347 1 150451182 150463293 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548040,nssv548038,nssv548039 M 3 3 0 HRNR JDW,NA18507,YH nsv8391 1 150451952 150460707 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv19749,nssv20424,nssv22751,nssv21769,nssv21075,nssv23693,nssv22106,nssv24289,nssv20075,nssv27160,nssv25703,nssv22083,nssv21067,nssv21082,nssv20416,nssv20406 M 31 15 1 HRNR NA07048,NA10847,NA10863,NA11830,NA12155,NA12740,NA18504,NA18537,NA18552,NA18563,NA18564,NA18572,NA18942,NA18972,NA18975,NA19007 nsv514913 1 150451984 150453776 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2849880,nssv2849868,nssv2849878,nssv2850945,nssv2849912,nssv2850890,nssv2849888,nssv2849869,nssv2849919,nssv2849870,nssv2849914,nssv2849666,nssv2849906,nssv2850993,nssv2849889,nssv2850971,nssv2849899,nssv2849674,nssv2849885,nssv2849718,nssv2849887,nssv2849812,nssv2849907,nssv2849770,nssv2849904,nssv2849631,nssv2849873,nssv2849801,nssv2849897,nssv2849721,nssv2849913,nssv2849670,nssv2849903,nssv2849849,nssv2849882,nssv2849648,nssv2849877,nssv2850958,nssv2849916,nssv2850966,nssv2849921,nssv2849711,nssv2849898,nssv2849761,nssv2849893,nssv2850929,nssv2849911,nssv2851002,nssv2849918,nssv2849608,nssv2849886,nssv2849735,nssv2849883,nssv2851013,nssv2849891,nssv2849858,nssv2849915,nssv2849611,nssv2849901,nssv2850990,nssv2849917,nssv2849779,nssv2849881,nssv2849844,nssv2849895,nssv2849678,nssv2849900,nssv2849756,nssv2849874,nssv2850978,nssv2849896,nssv2849673,nssv2849875,nssv2850887,nssv2849879,nssv2850889,nssv2849910,nssv2849836,nssv2849905,nssv2849871,nssv2849894,nssv2849728,nssv2849920,nssv2851026,nssv2849908,nssv2849693,nssv2849884,nssv2849610,nssv2849876,nssv2849837,nssv2849890,nssv2851017,nssv2849892,nssv2849723,nssv2849902,nssv2849738,nssv2849909,nssv2849697,nssv2849679,nssv2850985,nssv2850879,nssv2849799,nssv2849789,nssv2850896,nssv2850974,nssv2850986,nssv2850995,nssv2849705,nssv2850878,nssv2851039,nssv2849842,nssv2849769,nssv2849860,nssv2849759,nssv2849786,nssv2849654,nssv2849664,nssv2849725,nssv2849606,nssv2850883,nssv2849690,nssv2849617,nssv2849832,nssv2849659,nssv2849790,nssv2850885,nssv2850976,nssv2849640,nssv2849734,nssv2849793,nssv2849831,nssv2850933,nssv2850911,nssv2849749,nssv2849682,nssv2849724,nssv2849753,nssv2850980,nssv2849688,nssv2849853,nssv2849791,nssv2849845,nssv2851029,nssv2850928,nssv2849695,nssv2849781,nssv2849776,nssv2849634,nssv2850930,nssv2849809,nssv2851038,nssv2849807,nssv2849745,nssv2849731,nssv2850944,nssv2849618,nssv2850918,nssv2849834,nssv2849815,nssv2850898,nssv2850904,nssv2849803,nssv2849778,nssv2849603,nssv2849615,nssv2849765,nssv2850952,nssv2849685,nssv2849771,nssv2849647,nssv2849747,nssv2850938,nssv2850899,nssv2849667,nssv2849839,nssv2849763,nssv2850908,nssv2851009,nssv2850969,nssv2850895,nssv2849748,nssv2851033,nssv2849698,nssv2849785,nssv2849733,nssv2849782,nssv2850892,nssv2850901,nssv2849642,nssv2850906,nssv2849816,nssv2849709,nssv2849813,nssv2849627,nssv2850909,nssv2851022,nssv2850937,nssv2849861,nssv2850927,nssv2851014,nssv2850936,nssv2849847,nssv2850996,nssv2851019,nssv2850924,nssv2849715,nssv2849767,nssv2849604,nssv2849719,nssv2850893,nssv2849637,nssv2849741,nssv2849810,nssv2850946,nssv2849645,nssv2850981,nssv2849675,nssv2849796,nssv2850935,nssv2849706,nssv2850953,nssv2851000,nssv2850960,nssv2849784,nssv2850950,nssv2850970,nssv2849712,nssv2849635,nssv2849866,nssv2849768,nssv2850989,nssv2849805,nssv2849649,nssv2849830,nssv2849732,nssv2851036,nssv2849819,nssv2849650,nssv2850956,nssv2851024,nssv2851030,nssv2849865,nssv2849787,nssv2849864,nssv2851031,nssv2849737,nssv2849800,nssv2850903,nssv2850907,nssv2851012,nssv2849754,nssv2850877,nssv2850951,nssv2851035,nssv2849612,nssv2849696,nssv2849755,nssv2849783,nssv2850886,nssv2849780,nssv2849652,nssv2849707,nssv2850961,nssv2849843,nssv2850876,nssv2851001,nssv2849811,nssv2851041,nssv2851037,nssv2850926,nssv2850972,nssv2849620,nssv2851016,nssv2849700,nssv2849609,nssv2849823,nssv2851023,nssv2849621,nssv2849750,nssv2850905,nssv2849838,nssv2849806,nssv2849605,nssv2849626,nssv2849846,nssv2850982,nssv2851011,nssv2849857,nssv2849773,nssv2851027,nssv2849683,nssv2850965,nssv2849740,nssv2849764,nssv2851008,nssv2849792,nssv2850975,nssv2850991,nssv2851043,nssv2849821,nssv2849867,nssv2849717,nssv2850999,nssv2851010,nssv2849663,nssv2849689,nssv2849856,nssv2850931,nssv2849863,nssv2849824,nssv2849802,nssv2850940,nssv2849633,nssv2849743,nssv2849746,nssv2849619,nssv2849848,nssv2851007,nssv2849814,nssv2849665,nssv2851028,nssv2849722,nssv2851015,nssv2849829,nssv2849672,nssv2849662,nssv2850914,nssv2849862,nssv2849752,nssv2851006,nssv2850921,nssv2851034,nssv2849766,nssv2849602,nssv2851021,nssv2849636,nssv2850949,nssv2849729,nssv2849687,nssv2850912,nssv2850963,nssv2850900,nssv2849661,nssv2850992,nssv2850939,nssv2849713,nssv2849701,nssv2849702,nssv2850920,nssv2851032,nssv2849625,nssv2849795,nssv2850979,nssv2849835,nssv2849655,nssv2849828,nssv2849774,nssv2849680,nssv2849628,nssv2849623,nssv2849818,nssv2849686,nssv2850880,nssv2849757,nssv2850916,nssv2849855,nssv2849794,nssv2849607,nssv2849639,nssv2851018,nssv2849676,nssv2850910,nssv2850922,nssv2850968,nssv2849758,nssv2850955,nssv2849624,nssv2849833,nssv2849788,nssv2849736,nssv2849852,nssv2849681,nssv2849808,nssv2849613,nssv2849656,nssv2849657,nssv2850997,nssv2849616,nssv2850983,nssv2850902,nssv2849660,nssv2849777,nssv2851042,nssv2849744,nssv2849775,nssv2849817,nssv2850962,nssv2850977,nssv2849691,nssv2850884,nssv2849641,nssv2849704,nssv2849760,nssv2849827,nssv2849716,nssv2849643,nssv2850881,nssv2849751,nssv2850915,nssv2850967,nssv2850984,nssv2850932,nssv2850998,nssv2850897,nssv2850957,nssv2850913,nssv2849703,nssv2851040,nssv2849644,nssv2850891,nssv2849726,nssv2849614,nssv2849841,nssv2849658,nssv2849677,nssv2850964,nssv2849825,nssv2850994,nssv2849762,nssv2850925,nssv2850943,nssv2849727,nssv2849730,nssv2851003,nssv2849804,nssv2849622,nssv2849840,nssv2849797,nssv2849651,nssv2850888,nssv2849684,nssv2849742,nssv2850947,nssv2850959,nssv2849851,nssv2850919,nssv2849822,nssv2849630,nssv2849669,nssv2849629,nssv2850954,nssv2850973,nssv2851025,nssv2850948,nssv2851020,nssv2849694,nssv2849820,nssv2851004,nssv2850987,nssv2850941,nssv2849671,nssv2849850,nssv2849710,nssv2849646,nssv2849714,nssv2850923,nssv2849638,nssv2849739,nssv2850894,nssv2849653,nssv2849720,nssv2849859,nssv2849798,nssv2849699,nssv2849872,nssv2849708,nssv2849854,nssv2851005,nssv2850988,nssv2849632,nssv2850917,nssv2850942,nssv2849772,nssv2849668,nssv2850934,nssv2849692,nssv2849826,nssv2850882 M 2366 488 0 HRNR NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 esv2159882 1 150452173 150453901 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4567129 M 1 0 1 HRNR NA18507 dgv74n67 1 150452278 150460144 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824620,nsv824598,nsv824609 M 31 4 0 HRNR NA18552,NA18582,NA18949,NA18999 dgv214e59 1 150452452 150457950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3393466,esv3351698,esv3423709,esv3391709 M 185 4 0 HRNR NA12878,NA12891,NA12892,NA19238 esv29399 1 150452493 150463348 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20602,esv19713 M 40 22 1 HRNR NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12239,NA12287,NA12414,NA12776,NA12828,NA12878,NA15510,NA18511,NA18858,NA18861,NA18916,NA19099,NA19225 esv3397333 1 150452852 150455650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691980 M 185 1 0 HRNR NA19240 esv1763423 1 150454544 150457364 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3606906 M 2 0 1 HRNR HuRef dgv75n67 1 150458010 150460144 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824631,nsv824642 M 31 4 0 HRNR AK10,AK20,AK4,NA18942 nsv159214 1 150480555 150490330 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177792 M 24 "" esv1003613 1 150500702 150543456 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563823 M 3 0 0 FLG HuRef nsv547855 1 150501668 150507128 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723519,nssv723518 M 17421 2 0 "" nsv547856 1 150501668 150518338 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723520,nssv723521 M 17421 2 0 "" nsv547857 1 150502188 150507128 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723523,nssv723522 M 17421 1 1 "" esv3890649 1 150513395 150531734 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785876 M 3017 0 1 "" nsv7183 1 150529970 150550238 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2542 M 9 0 0 FLG NA18555 esv25681 1 150540839 150554163 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18892,esv20418 M 40 0 9 FLG,FLG-AS1 NA06985,NA12044,NA18505,NA18511,NA18858,NA18907,NA19108,NA19240,NA19257 nsv471348 1 150541275 150564303 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548043,nssv548041,nssv548042 M 3 3 0 FLG,FLG-AS1 JDW,NA18507,YH nsv821364 1 150544324 150546204 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420636 M 1 1 0 FLG NA10851 esv1330223 1 150545285 150546257 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3639326 M 2 0 1 FLG HuRef nsv824653 1 150547164 150549783 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423730 M 31 0 1 FLG NA18968 nsv159623 1 150547363 150551253 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178201 M 24 FLG esv3394198 1 150547552 150548150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691981 M 185 1 0 FLG NA19239 nsv998298 1 150555309 150586501 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498912 M 29084 0 1 FLG,FLG-AS1 esv2593579 1 150589771 150591298 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5179622 M 1 0 1 FLG2,FLG-AS1 NA18507 esv2043587 1 150590634 150591133 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4863264 M 1 0 1 FLG2,FLG-AS1 NA18507 nsv516541 1 150643334 150657076 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv672545,nssv669003 M 2026 0 2 CRNN nsv824664 1 150675648 150701067 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431103 M 31 0 1 "" AK18 nsv463850 1 150677714 150700633 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539866 M 1557 0 1 "" HGDP01193 nsv547858 1 150677714 150700633 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173178 M 17421 0 1 "" HGDP01193 esv3444140 1 150710502 150710521 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596412 M 185 1 0 "" NA11881 esv24965 1 150718850 150719885 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17631 M 40 0 1 "" NA18909 esv2750810 1 150720293 150927551 CNV gain Pinto_et_al_2007 17911159 SNP array essv6988316,essv6980785,essv6980784,essv6985409,essv6980783 M 771 5 0 CRCT1,LCE2B,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3D,LCE3E,LCE5A BEC_158 esv3329415 1 150724044 150724044 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740938 M 185 1 0 "" NA19240 dgv415n100 1 150731468 150785821 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005553,nsv1012908 M 29084 0 2 CRCT1,LCE5A nsv547859 1 150733506 150749211 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723524 M 17421 0 1 "" esv2758970 1 150739463 151164777 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756865,esv2757755 M 270 58 80 C1orf68,CRCT1,IVL,KPRP,LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE2A,LCE2B,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3D,LCE3E,LCE4A,LCE5A,LCE6A,SMCP NA06991,NA06994,NA07048,NA07055,NA07056,NA07348,NA10839,NA10846,NA10847,NA10856,NA10860,NA11829,NA11882,NA11992,NA11993,NA12005,NA12006,NA12043,NA12057,NA12144,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12717,NA12740,NA12751,NA12752,NA12763,NA12801,NA12802,NA12812,NA12814,NA12815,NA12864,NA12872,NA12873,NA12874,NA12891,NA12892,NA18504,NA18505,NA18506,NA18523,NA18524,NA18529,NA18540,NA18558,NA18561,NA18563,NA18564,NA18571,NA18577,NA18579,NA18592,NA18593,NA18594,NA18611,NA18612,NA18620,NA18621,NA18624,NA18632,NA18635,NA18636,NA18637,NA18852,NA18854,NA18855,NA18856,NA18857,NA18872,NA18912,NA18940,NA18942,NA18944,NA18949,NA18951,NA18952,NA18953,NA18960,NA18964,NA18966,NA18968,NA18969,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18991,NA18994,NA18995,NA18997,NA18998,NA18999,NA19003,NA19098,NA19099,NA19100,NA19101,NA19102,NA19119,NA19120,NA19127,NA19129,NA19130,NA19131,NA19132,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19152,NA19153,NA19154,NA19160,NA19171,NA19172,NA19173,NA19193,NA19194,NA19200,NA19203,NA19205,NA19206,NA19207,NA19210,NA19211,NA19239 nsv524241 1 150750753 150755052 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700131 M 2026 0 1 CRCT1,LCE5A nsv518413 1 150755052 150764309 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695848 M 2026 0 1 CRCT1 nsv526150 1 150763838 150764309 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702409 M 2026 0 1 "" dgv565n54 1 150764309 150819989 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547864,nsv547863,nsv547861,nsv547860 M 17421 0 14 LCE3D,LCE3E HGDP00841,HGDP00999,HGDP01019 nsv547862 1 150775186 150857766 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv723537,nssv723538,nssv723536 M 17421 0 3 LCE3B,LCE3C,LCE3D,LCE3E dgv37n27 1 150776972 150819989 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463861,nsv463872 M 1557 0 2 LCE3D,LCE3E HGDP00999,HGDP01019 dgv416n100 1 150784469 150823026 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000403,nsv1003895,nsv1008009,nsv999353 M 29084 0 7 LCE3D,LCE3E nsv1002425 1 150793267 150853206 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501229,nssv3482983,nssv3499680 M 29084 0 3 LCE3B,LCE3C,LCE3D,LCE3E esv2762965 1 150793267 150853218 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6998523,essv6998789,essv6999989,essv6999344,essv6999621,essv6999466,essv6998767,essv6998611,essv6998567,essv6999155,essv7000377,essv6999878,essv7000388,essv7000277,essv6998300,essv6999745,essv7000399,essv6999577,essv6998233,essv6998122,essv6999711,essv7000055,essv6999044,essv6998844,essv6998589,essv6999756,essv6999678,essv6999499,essv6998645,essv6999255,essv6999200,essv6998822,essv6999244,essv6998933,essv6999366,essv6999333,essv6998388,essv7000066,essv7000166,essv6998333,essv6998678,essv7000411,essv6998978,essv6999089,essv6998733,essv6999789,essv6998667,essv6999800,essv6998800,essv6998377,essv7000422,essv6999833,essv7000433,essv6999066,essv6998878,essv7000444,essv7000078,essv6999944,essv6998955,essv7000455,essv6998266,essv7000288,essv6999288,essv6999555,essv6999778,essv6998366,essv6998756,essv7000466,essv6998967,essv6998778,essv6998600,essv7000477,essv6998277,essv6999656,essv6999566,essv6999233,essv7000488,essv6998499,essv6999377,essv6998745,essv6998534,essv7000499,essv6999477,essv7000177,essv7000089,essv6998510,essv6999355,essv6998867,essv7000366,essv6998455,essv7000300,essv6999388,essv6999033,essv6998900,essv7000510,essv7000522,essv6998288,essv6999166,essv7000189,essv6998545,essv6999022,essv6999667,essv6998200,essv7000100,essv6999599,essv6999533,essv6999444,essv6998833,essv6999588,essv6998689,essv7000000,essv6999922,essv6998355,essv7000533,essv7000033,essv6999911,essv6999133,essv6999867,essv6999411,essv6999422,essv6998911,essv7000155,essv7000133,essv7000544,essv6999634,essv7000555,essv6998722,essv6999700,essv6999433,essv6998144,essv7000111,essv7000566,essv6998811,essv7000200,essv6999078,essv7000044,essv6999955,essv6999211,essv7000577,essv6999844,essv6999311,essv7000588,essv6998700,essv6999144,essv7000211,essv6999856,essv6999455,essv7000599,essv6998578,essv7000011,essv6998211,essv6999822,essv7000311,essv6998311,essv6998466,essv6999055,essv7000222,essv6999767,essv7000122,essv6999733,essv6998711,essv7000022,essv6999100,essv6999399,essv6998634,essv6999322,essv6998166,essv6999689,essv7000322,essv6999645,essv7000233,essv6998444,essv6999488,essv6998622,essv6999933,essv6999277,essv6999522,essv6998133,essv6998322,essv6999967,essv6999722,essv7000333,essv6998488,essv6999122,essv6999266,essv7000355,essv6999111,essv6998944,essv6999811,essv6999222,essv6998177,essv6999510,essv6999889,essv6999000,essv6999900,essv6998255,essv7000244,essv6999300,essv6998433,essv6998477,essv6998922,essv6999610,essv6998411,essv6998556,essv6998422,essv6998244,essv6998889,essv6998399,essv6998222,essv6998989,essv6998656,essv6998856,essv6998155,essv7000344,essv7000255,essv7000266,essv6999011,essv7000144,essv6999544,essv6999978,essv6998344,essv6999189,essv6999177,essv6998189 M 1109 0 224 LCE3B,LCE3C,LCE3D,LCE3E SW_0002,SW_0005,SW_0008,SW_0009,SW_0017,SW_0032,SW_0033,SW_0043,SW_0045,SW_0060,SW_0071,SW_0076,SW_0086,SW_0099,SW_0100,SW_0101,SW_0103,SW_0121,SW_0141,SW_0144,SW_0145,SW_0149,SW_0155,SW_0165,SW_0169,SW_0175,SW_0183,SW_0184,SW_0187,SW_0202,SW_0578,SW_0592,SW_0593,SW_0604,SW_0605,SW_0619,SW_0620,SW_0621,SW_0623,SW_0628,SW_0641,SW_0646,SW_0647,SW_0663,SW_0675,SW_0677,SW_0701,SW_0702,SW_0703,SW_0773,SW_0775,SW_0802,SW_0803,SW_0804,SW_0805,SW_0818,SW_0830,SW_0832,SW_0833,SW_0834,SW_0843,SW_0846,SW_0855,SW_0859,SW_0869,SW_0872,SW_0883,SW_0884,SW_0885,SW_0888,SW_0890,SW_0892,SW_1003,SW_1006,SW_1009,SW_1012,SW_1013,SW_1017,SW_1026,SW_1028,SW_1029,SW_1030,SW_1033,SW_1034,SW_1038,SW_1044,SW_1046,SW_1054,SW_1056,SW_1058,SW_1059,SW_1064,SW_1065,SW_1067,SW_1068,SW_1071,SW_1077,SW_1081,SW_1089,SW_1095,SW_1097,SW_1100,SW_1104,SW_1105,SW_1106,SW_1107,SW_1108,SW_1109,SW_1110,SW_1112,SW_1124,SW_1125,SW_1127,SW_1132,SW_1143,SW_1149,SW_1152,SW_1153,SW_1157,SW_1167,SW_1168,SW_1171,SW_1174,SW_1176,SW_1182,SW_1184,SW_1189,SW_1193,SW_1195,SW_1199,SW_1203,SW_1208,SW_1209,SW_1216,SW_1220,SW_1222,SW_1223,SW_1224,SW_1229,SW_1230,SW_1234,SW_1244,SW_1249,SW_1254,SW_1263,SW_1264,SW_1268,SW_1272,SW_1274,SW_1281,SW_1282,SW_1283,SW_1285,SW_1292,SW_1298,SW_1303,SW_1304,SW_1308,SW_1318,SW_1323,SW_1325,SW_1326,SW_1327,SW_1332,SW_1333,SW_1335,SW_1337,SW_1341,SW_1342,SW_1348,SW_1351,SW_1355,SW_1357,SW_1361,SW_1365,SW_1368,SW_1371,SW_1375,SW_1380,SW_1381,SW_1386,SW_1387,SW_1389,SW_1391,SW_1392,SW_1393,SW_1397,SW_1400,SW_1404,SW_1408,SW_1409,SW_1412,SW_1416,SW_1417,SW_1419,SW_1425,SW_1433,SW_1435,SW_1438,SW_1439,SW_1441,SW_1450,SW_1451,SW_1456,SW_1466,SW_1468,SW_1469,SW_1470,SW_1472,SW_1476,SW_1477,SW_1480,SW_1482,SW_1483,SW_1504,SW_1505,SW_1517,SW_1523,SW_1527,SW_1539,SW_1543,SW_1551,SW_1569,SW_1571 dgv566n54 1 150793436 150828032 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547866,nsv547865,nsv547867 M 17421 0 6 LCE3D,LCE3E dgv38n27 1 150796456 150819989 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463883,nsv463973,nsv463894,nsv463916,nsv463951,nsv463927,nsv463938,nsv463905,nsv463962 M 1557 0 9 LCE3D,LCE3E HGDP00703,HGDP00706,HGDP00708,HGDP00837,HGDP00852,HGDP00865,HGDP00995,HGDP01058,HGDP01059 dgv567n54 1 150796456 150819989 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547869,nsv547874,nsv547868,nsv547873,nsv547872,nsv547875 M 17421 0 85 LCE3D,LCE3E HGDP00703,HGDP00706,HGDP00708,HGDP00837,HGDP00839,HGDP00848,HGDP00852,HGDP00865,HGDP00995,HGDP00997,HGDP01000,HGDP01005,HGDP01049,HGDP01052,HGDP01058,HGDP01059 dgv39n27 1 150796456 150857766 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463984,nsv464006,nsv463995 M 1557 0 3 LCE3B,LCE3C,LCE3D,LCE3E HGDP00846,HGDP00868,HGDP00998 dgv568n54 1 150796456 150864572 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547870,nsv547871,nsv547881,nsv547883,nsv547876,nsv547877,nsv547878 M 17421 0 16 LCE3A,LCE3B,LCE3C,LCE3D,LCE3E HGDP00846,HGDP00868,HGDP00998,HGDP01008,HGDP01048 nsv470739 1 150797134 150819989 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547772,nssv547773,nssv547774,nssv547775,nssv547776,nssv547777,nssv547779 M 443 0 7 LCE3D,LCE3E HGDP00703,HGDP00706,HGDP00708,HGDP00865,HGDP01038,HGDP01039,HGDP01049 nsv516961 1 150797134 150819989 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv657450,nssv667208,nssv679487,nssv653515,nssv693224,nssv686060,nssv692439,nssv659830,nssv688607,nssv680007 M 2026 0 10 LCE3D,LCE3E nsv2888 1 150798761 150887068 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9359,nssv2551,nssv10268,nssv9615,nssv1552,nssv3390,nssv5985,nssv11087 M 9 0 8 LCE3A,LCE3B,LCE3C,LCE3D,LCE3E NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 dgv569n54 1 150803384 150819989 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547882,nsv547880,nsv547879 M 17421 0 8 LCE3D,LCE3E nsv437244 1 150803779 150850302 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467125 M 60 0 1 LCE3C,LCE3D,LCE3E NA18515 dgv417n100 1 150806699 150853206 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001393,nsv1012532,nsv998840,nsv1003143,nsv1006844,nsv1004638 M 29084 14 0 LCE3B,LCE3C,LCE3D nsv997268 1 150815036 150826896 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483876 M 29084 0 1 LCE3D dgv418n100 1 150815036 150858038 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005976,nsv1000948,nsv1014251,nsv1004569,nsv1006062,nsv1010730,nsv1014408,nsv1012636,nsv1003552,nsv1002896,nsv1013452,nsv998463,nsv1006239,nsv1015121,nsv1007326,nsv1000234,nsv1000610,nsv1000826,nsv1012969,nsv1006123,nsv1012721,nsv1000014,nsv1013967,nsv997341,nsv1013686,nsv1010309,nsv1003455,nsv1006943,nsv1005044,nsv1013594,nsv1007933,nsv1000690,nsv1001945,nsv1002920,nsv1004883,nsv1004016,nsv998924,nsv1001523,nsv998695,nsv998522,nsv1010214,nsv997612,nsv1011852,nsv1004137,nsv1003053,nsv999769,nsv1014426,nsv1002576,nsv1004865,nsv1014808,nsv1004259,nsv1014554 M 29084 0 407 LCE3B,LCE3C,LCE3D nsv68 1 150816580 150875096 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv68 M 1 0 1 LCE3A,LCE3B,LCE3C,LCE3D NA15510 esv33483 1 150816893 151042150 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98300,essv97887,essv97493,essv97429,essv92668,essv93498,essv92919,essv95814,essv92811,essv93692,essv96211,essv96585,essv98042,essv96071,essv98754,essv96298,essv95359,essv101042,essv93406,essv94920,essv100196,essv96856,essv100423,essv99645,essv100764,essv97723,essv94316,essv98246,essv100588,essv98704,essv96046,essv99032,essv98542,essv97006,essv96473,essv93410,essv93477,essv95538,essv93180,essv98386,essv92884,essv96230,essv93265,essv95694,essv95790,essv97157,essv93005,essv97052,essv94039,essv94334,essv94137,essv96541,essv95029,essv94795,essv95183,essv95019,essv93828,essv100138,essv93786,essv100466,essv93810,essv98110,essv96115,essv99409,essv95697,essv99761,essv97146,essv94796 M 51 39 4 C1orf68,KPRP,LCE1D,LCE1E,LCE1F,LCE2A,LCE2B,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3D,LCE4A 21606,21616,21634,21656,21659,21693,21721,21772,21791,21802,21808,21817,21837,21841,21847,21863,21872,21879,21911,21938,21939,21944,21972,22007,22011,22075,22085,22086,22127,22128,22170,22217,22231,22259,22261,22278,22286,22298,22300,22335,22352,22371 dgv419n100 1 150817873 150842073 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002458,nsv999272,nsv1010452,nsv1010037,nsv999458,nsv1013879,nsv1011259,nsv1003437,nsv1007871,nsv1007676,nsv1002056,nsv1007985,nsv1004552,nsv1010972,nsv1012035,nsv1007178,nsv1005679,nsv1000006,nsv1011059,nsv1012027,nsv1005651,nsv998412,nsv1002807 M 29084 0 776 LCE3C,LCE3D dgv420n100 1 150817873 150857837 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013483,nsv1003265,nsv1001095,nsv1007918,nsv1014121,nsv1011035,nsv1005712,nsv1002461,nsv998607,nsv1004673,nsv998274,nsv1009559,nsv1008926,nsv998604,nsv1000442,nsv1011427,nsv1014407,nsv1007163,nsv1004748,nsv1001962,nsv1000701,nsv1001375,nsv999226,nsv1009665,nsv1013478,nsv999129,nsv998031,nsv1008327,nsv1006856 M 29084 1867 2836 LCE3B,LCE3C,LCE3D dgv5e213 1 150817949 150857189 CNV gain Mokhtar_et_al_2014 24956385 SNP array esv3584499,esv3584510,esv3584521 M 34 5 0 LCE3B,LCE3C,LCE3D 8S,KSM008,OA016,OA017,OA062 dgv421n100 1 150819085 150846061 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012745,nsv1014367,nsv1012587,nsv998708 M 29084 0 24 LCE3C,LCE3D dgv422n100 1 150819085 150846437 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009666,nsv1011431,nsv1013443,nsv1003987,nsv1001199 M 29084 7 49 LCE3C,LCE3D dgv423n100 1 150819366 150860993 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014761,nsv1007452,nsv1006766,nsv1014432,nsv1007388,nsv1003165 M 29084 7 0 LCE3B,LCE3C,LCE3D dgv6e213 1 150819378 150853218 CNV loss Mokhtar_et_al_2014 24956385 SNP array esv3584609,esv3584611 M 34 0 6 LCE3B,LCE3C,LCE3D OA005,OA013,OA018,OA020,OA053,OA092 dgv2n31 1 150819552 150856898 CNV loss Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nsv471494,nsv471493 M 3 0 3 LCE3B,LCE3C,LCE3D JDW,NA18507,YH nsv437245 1 150819989 150830408 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467126 M 60 0 1 "" NA19129 nsv437247 1 150819989 150850302 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467128 M 60 0 1 LCE3C NA19240 dgv570n54 1 150819989 150853560 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547889,nsv547884 M 17421 42 828 LCE3B,LCE3C esv2615503 1 150821098 150857078 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5222962 M 1 0 1 LCE3B,LCE3C NA18507 nsv472453 1 150821312 150821312 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017784 M 9 1 0 "" NA18555 esv998954 1 150821543 150856341 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564089 M 3 0 1 LCE3B,LCE3C HuRef dgv21n16 1 150821592 150855544 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436496,nsv435659 M 2 0 2 LCE3B,LCE3C NA15510,NA18505 dgv571n54 1 150821629 150857189 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547890,nsv547885 M 17421 0 5 LCE3B,LCE3C nsv8402 1 150821656 150857098 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv18448,nssv20746,nssv21076,nssv22741,nssv19435,nssv24579,nssv26169,nssv20079,nssv23994,nssv19751,nssv25944,nssv20735,nssv21087,nssv25948,nssv24288,nssv27290,nssv22413,nssv25465,nssv21084,nssv23069,nssv26173,nssv20410,nssv20740,nssv21412,nssv20405,nssv24894,nssv20754,nssv21772 M 31 8 10 LCE3B,LCE3C NA07048,NA10839,NA10847,NA12155,NA12740,NA12802,NA12872,NA18504,NA18552,NA18563,NA18564,NA18942,NA18972,NA18975,NA18980,NA19132,NA19144,NA19173 nsv510990 1 150821664 150871827 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624364,nssv622426,nssv618600,nssv621656 M 4 0 0 LCE3A,LCE3B,LCE3C CHM,NA10860,NA15510,NA18994 nsv1006152 1 150821800 150839272 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705145 M 29084 1 0 "" dgv424n100 1 150821800 150846437 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997318,nsv1014176,nsv1001239,nsv1006628 M 29084 6 0 LCE3C nsv438048 1 150821800 150850302 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469097,nssv469008,nssv468930,nssv468352,nssv468919,nssv468952,nssv468552,nssv468707,nssv468641,nssv469052,nssv468840,nssv469086,nssv468875,nssv468263,nssv468530,nssv468607,nssv468774,nssv468663,nssv468430,nssv468563,nssv468541,nssv468285,nssv468752,nssv468408,nssv468986,nssv468853,nssv468452,nssv468330,nssv468886,nssv468574,nssv469108,nssv468308,nssv468729,nssv468652,nssv468864,nssv469075,nssv469119,nssv468630,nssv468485,nssv468696,nssv469041,nssv468419,nssv468741,nssv468474,nssv468274,nssv468785,nssv469019,nssv468674,nssv468829,nssv468374,nssv468507,nssv468975,nssv468585,nssv468796,nssv468818,nssv468363,nssv468897,nssv468997,nssv468441,nssv468908,nssv468685,nssv468596,nssv468807,nssv468964,nssv468463,nssv468319,nssv468496,nssv468297,nssv468941,nssv468618,nssv468385,nssv468519,nssv468341,nssv468718,nssv468396,nssv469063,nssv469030,nssv468763 M 269 0 49 LCE3C NA06985,NA06991,NA06993,NA07019,NA07034,NA07048,NA07055,NA07056,NA10831,NA10846,NA10851,NA10856,NA10859,NA11829,NA11882,NA12057,NA12145,NA12155,NA12707,NA12717,NA12752,NA12753,NA12760,NA12761,NA12763,NA12878,NA12891,NA18500,NA18502,NA18503,NA18505,NA18515,NA18517,NA18912,NA18914,NA19119,NA19120,NA19128,NA19129,NA19143,NA19145,NA19160,NA19161,NA19200,NA19202,NA19207,NA19208,NA19238,NA19240 esv2421966 1 150821800 150853218 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5031153,essv5074018,essv5084958,essv5128714,essv5146543,essv5154576,essv5128265,essv5140227,essv5031212,essv5005283,essv5007748,essv5131121,essv5024518,essv5038019,essv5138835,essv5047672,essv5059602,essv5092210,essv5071860,essv5093479,essv5121691,essv5108647,essv5137983,essv5066862,essv5003526,essv5083239,essv5005639,essv5002443,essv5051382,essv5138130,essv5056209,essv5094996,essv5030261,essv5048572,essv5114928,essv5118549,essv5035342,essv5022055,essv5018446,essv5150334,essv5025503,essv5129951,essv5123050,essv5030481,essv5127178,essv5002663,essv5055926,essv5067244,essv5150540,essv5143508,essv5131549,essv5065189,essv5047670,essv5150165,essv5158084,essv5040382,essv5091119,essv5019119,essv5055384,essv5032942,essv5126238,essv5147482,essv5035103,essv5026040,essv5155799,essv5031867,essv5081800,essv5076800,essv5107577,essv5153552,essv5091141,essv5042774,essv5026024,essv5006352,essv5110532,essv5036821,essv5147304,essv5065951,essv5151918,essv5026895,essv5021215,essv5132267,essv5052538,essv5110253,essv5140627,essv5122776,essv5133269,essv5038037,essv5031216,essv5116536,essv5053708,essv5132244,essv5048337,essv5121033,essv5142777,essv5014798,essv5015391,essv5087020,essv5081470,essv5042537,essv5021322,essv5153422,essv5018162,essv5016785,essv5137989,essv5116717,essv5150069,essv5020981,essv5023462,essv5014634,essv5052640,essv5088618,essv5059236,essv5116475,essv5128401,essv5048810,essv5112152,essv5085413,essv5079124,essv5093551,essv5100700,essv5096174,essv5089822,essv5036381,essv5009309,essv5006076,essv5114588,essv5118350,essv5037353,essv5111575,essv5126825,essv5051866,essv5011880,essv5129269,essv5058321,essv5046530,essv5026882,essv5069142,essv5085072,essv5141947,essv5092608,essv5091745,essv5036881,essv5003650,essv5010288,essv5072800,essv5017290,essv5154063,essv5031367,essv5008919,essv5084897,essv5145314,essv5105399,essv5077725,essv5078405,essv5028788,essv5004169,essv5089225,essv5016134,essv5134959,essv5057893,essv5005854,essv5032557,essv5120598,essv5132445,essv5122995,essv5140073,essv5045903,essv5072726,essv5036426,essv5070961,essv5031229,essv5106504,essv5082659,essv5088836,essv5114294,essv5153992,essv5116500,essv5033131,essv5077341,essv5039490,essv5062822,essv5145343,essv5158007,essv5121814,essv5063877,essv5013548,essv5057459,essv5032716,essv5033463,essv5085296,essv5083078,essv5136660,essv5144757,essv5071824,essv5007164,essv5142300,essv5048654,essv5050294,essv5031022,essv5043179,essv5152798,essv5097656,essv5071369,essv5043958,essv5022087,essv5159879,essv5014742,essv5115083,essv5007253,essv5040168,essv5123051,essv5003645,essv5079822,essv5015990,essv5020111,essv5048442,essv5095771,essv5056289,essv5094696,essv5053704,essv5114363,essv5143196,essv5085239,essv5059419,essv5044498,essv5047740,essv5022713,essv5057488,essv5144870,essv5033459,essv5121523,essv5092329,essv5069611,essv5132221,essv5099329,essv5028808,essv5064467,essv5111823,essv5018356,essv5130253,essv5042701,essv5016955,essv5119561,essv5019237,essv5130115,essv5036490,essv5054926,essv5053342,essv5078259,essv5127465,essv5018348,essv5065310,essv5135544,essv5066498,essv5110375,essv5006000,essv5104123,essv5021780,essv5055852,essv5006947,essv5017238,essv5056306,essv5024594,essv5079345,essv5026189,essv5112620,essv5078482,essv5047616,essv5117243,essv5026124,essv5141893,essv5101707,essv5021405,essv5038553,essv5082176,essv5134089,essv5058763,essv5028262,essv5059021,essv5006789,essv5019510,essv5103505,essv5012359,essv5132235,essv5006587,essv5021448,essv5160670,essv5084927,essv5041567,essv5103343,essv5110071,essv5110154,essv5029072,essv5059474,essv5067505,essv5123939,essv5095099,essv5136694,essv5093114,essv5030470,essv5109722,essv5121066,essv5031134,essv5018828,essv5052423,essv5010344,essv5004058,essv5062843,essv5108474,essv5044100,essv5155493,essv5116531,essv5047224,essv5011128,essv5152647,essv5082818,essv5039346,essv5137939,essv5016426,essv5016457,essv5048931,essv5047913,essv5115555,essv5142136,essv5077612,essv5147742,essv5049227,essv5154404,essv5023061,essv5096744,essv5119024,essv5110222,essv5085399,essv5082091,essv5006444,essv5099555,essv5096831,essv5126385,essv5030492,essv5013968,essv5143334,essv5086774,essv5059399,essv5102386,essv5059330,essv5024556,essv5013473,essv5039191,essv5078887,essv5149645,essv5119749,essv5050813,essv5060729,essv5101578,essv5131243,essv5084385,essv5148396,essv5065446,essv5054917,essv5156994,essv5112223,essv5133039,essv5062248,essv5022613,essv5054767,essv5030823,essv5108064,essv5134568,essv5092764,essv5100129,essv5010879,essv5030258,essv5068331,essv5146144,essv5065092,essv5097675,essv5065142,essv5049002,essv5096591,essv5004197,essv5137467,essv5019625,essv5083847,essv5094847,essv5147876,essv5078833,essv5155091,essv5050740,essv5069876,essv5058817,essv5031957,essv5111011,essv5009289,essv5044366,essv5136533,essv5155632,essv5002031,essv5075886,essv5065117,essv5130686,essv5049852,essv5113980,essv5028639,essv5042690,essv5117636,essv5004353,essv5025430,essv5089799,essv5089208,essv5103970,essv5011909,essv5062739,essv5028700,essv5134402,essv5076823,essv5154442,essv5102821,essv5042656,essv5135162,essv5006822,essv5024701,essv5030354,essv5074783,essv5041476,essv5077472,essv5086175,essv5123135,essv5039938,essv5094615,essv5066582,essv5077137,essv5081615,essv5089201,essv5072602,essv5148390,essv5031668,essv5099984,essv5022221,essv5031065,essv5160637,essv5056093,essv5049916,essv5007057,essv5108102,essv5044573,essv5098171,essv5019114,essv5160684,essv5136995,essv5087883,essv5014469,essv5045111,essv5018574,essv5065840,essv5007313,essv5158560,essv5153570,essv5088449,essv5123214,essv5122098,essv5138029,essv5137295,essv5159223,essv5137014,essv5144949,essv5141897,essv5107081,essv5103311,essv5131523,essv5032484,essv5116821,essv5142378,essv5150642,essv5067838,essv5020601,essv5058644,essv5115240,essv5100603,essv5115534,essv5105813,essv5152645,essv5074711,essv5010293,essv5024383,essv5092264,essv5095012,essv5072917,essv5085328,essv5079423,essv5083659,essv5061140,essv5155006,essv5109030,essv5015166,essv5074404,essv5160768,essv5152143,essv5141836,essv5156978,essv5006751,essv5098911,essv5009966,essv5104813,essv5157277,essv5140411,essv5114844,essv5023161,essv5066947,essv5021699,essv5125225,essv5039035,essv5030457,essv5146180,essv5062684,essv5005144,essv5065026,essv5122511,essv5145438,essv5141730,essv5144223,essv5057854,essv5094639,essv5025538,essv5104882,essv5041148,essv5013813,essv5075340,essv5013985,essv5113151,essv5008708,essv5143736,essv5132903,essv5002679,essv5080901,essv5019588,essv5103324,essv5032905,essv5062720,essv5012509,essv5050374,essv5114750,essv5023859,essv5110874,essv5119503,essv5074398,essv5017224,essv5028123,essv5040313,essv5044609,essv5059320,essv5141853,essv5038167,essv5018183,essv5041812,essv5050840,essv5019759,essv5075851,essv5136870,essv5003098,essv5046353,essv5008998,essv5083827,essv5103400,essv5058956,essv5093347,essv5132647,essv5081133,essv5094373,essv5111801,essv5012042,essv5029045,essv5126316,essv5115674,essv5036024,essv5025022,essv5037516,essv5147641,essv5143583,essv5118528,essv5051780,essv5134035,essv5132732,essv5074132,essv5115599,essv5012792,essv5076872,essv5094995,essv5059564,essv5029815,essv5111962,essv5041794,essv5068255,essv5020877,essv5072136,essv5138614,essv5034682,essv5065986,essv5025381,essv5075572,essv5046201,essv5115984,essv5096655,essv5017738,essv5089526,essv5038022,essv5024754,essv5110941,essv5116579,essv5108289,essv5031521,essv5113598,essv5010448,essv5127033,essv5134271,essv5114312,essv5112909,essv5043711,essv5103225,essv5052767,essv5109044,essv5030370,essv5061342,essv5058484,essv5097047,essv5107008,essv5096601,essv5088737,essv5110536,essv5096102,essv5069478,essv5123258,essv5150161,essv5040688,essv5103631,essv5064790,essv5094641,essv5090411,essv5124029,essv5135153,essv5081767,essv5017283,essv5125019,essv5052415,essv5074823,essv5130745,essv5088401,essv5113530,essv5109180,essv5012981,essv5152045,essv5087205,essv5043994,essv5049222,essv5152940,essv5136903,essv5118835,essv5055003,essv5112098,essv5054630,essv5049904,essv5056203,essv5091366,essv5025285,essv5033763,essv5161031,essv5133261,essv5044944,essv5127916,essv5036409,essv5047388,essv5012540,essv5019838,essv5098399,essv5076037,essv5063291,essv5058412,essv5084251,essv5146969,essv5017199,essv5015808,essv5006014,essv5149247,essv5058351,essv5059187,essv5058680,essv5117392,essv5033003,essv5047515,essv5137639,essv5022132,essv5048492,essv5068964,essv5131454,essv5115364,essv5079902,essv5106959,essv5104342,essv5103617,essv5134534,essv5129579,essv5096570,essv5036324,essv5116959,essv5133856,essv5134557,essv5033138,essv5116942,essv5104077,essv5131514,essv5142618,essv5123701,essv5148307,essv5141023,essv5080888,essv5139501,essv5042806,essv5131674,essv5079486,essv5058986,essv5092918,essv5045208,essv5087757,essv5118416,essv5017156,essv5143142,essv5002592,essv5055780,essv5159749,essv5058452,essv5033102,essv5063113,essv5091796,essv5077740,essv5158750,essv5106226,essv5015224,essv5025730,essv5034253,essv5083585,essv5039049,essv5123741,essv5117035,essv5051458,essv5140327,essv5074065,essv5030718,essv5143949,essv5104084,essv5097452,essv5064880,essv5043223,essv5105339,essv5147156,essv5007557,essv5014603,essv5056213,essv5113834,essv5126258,essv5038740,essv5021570,essv5114248,essv5130402,essv5138520,essv5034944,essv5117090,essv5087800,essv5158498,essv5035636,essv5024153,essv5027188,essv5070558,essv5143210,essv5012153,essv5131722,essv5144715,essv5040404,essv5074746,essv5012773,essv5013633,essv5141323,essv5137180,essv5007363,essv5146484,essv5066200,essv5146502,essv5087620,essv5043890,essv5034162,essv5085567,essv5002211,essv5095176,essv5139535,essv5038065,essv5122258,essv5060243,essv5161180,essv5017532,essv5158685,essv5031684,essv5145066,essv5044917,essv5028746,essv5110682,essv5117278,essv5068393,essv5034364,essv5095403,essv5081755,essv5146783,essv5137604,essv5047425,essv5106791,essv5070791,essv5128098,essv5039078,essv5148108,essv5074213,essv5049892,essv5083297,essv5004558,essv5070683,essv5130062,essv5001966,essv5101397,essv5134987,essv5013717,essv5031995,essv5124308,essv5032228,essv5062985,essv5116043,essv5130367,essv5093362,essv5041656,essv5049251,essv5042359,essv5069237,essv5013449,essv5053355,essv5009294,essv5024147,essv5111515,essv5057335,essv5078032,essv5109980,essv5105579,essv5156958,essv5150954,essv5129487,essv5062809,essv5071077,essv5025265,essv5054641,essv5022606,essv5101828,essv5025507,essv5021002,essv5048235,essv5059837,essv5095051,essv5037672,essv5091615,essv5142426,essv5144170,essv5032782,essv5070605,essv5049314,essv5095781,essv5117097,essv5082777,essv5063647,essv5054680,essv5007675,essv5135155,essv5030242,essv5126260,essv5146587,essv5015817,essv5106928,essv5054927,essv5148292,essv5153467,essv5139734,essv5019340,essv5066088,essv5148702,essv5054916,essv5089141,essv5086675,essv5138935,essv5121433,essv5044816,essv5092553 M 1184 0 894 LCE3B,LCE3C NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06995,NA06997,NA07000,NA07014,NA07029,NA07031,NA07037,NA07045,NA07055,NA07056,NA07345,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10846,NA10847,NA10852,NA10853,NA10854,NA10855,NA10856,NA10859,NA10861,NA10863,NA10865,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11891,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11931,NA11992,NA11993,NA11994,NA12003,NA12005,NA12006,NA12044,NA12056,NA12057,NA12144,NA12145,NA12146,NA12155,NA12234,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12275,NA12282,NA12283,NA12286,NA12287,NA12335,NA12336,NA12340,NA12341,NA12342,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12413,NA12489,NA12707,NA12708,NA12716,NA12718,NA12748,NA12749,NA12750,NA12752,NA12753,NA12760,NA12761,NA12762,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12843,NA12865,NA12875,NA12878,NA12891,NA17962,NA17965,NA17967,NA17968,NA17970,NA17972,NA17974,NA17975,NA17976,NA17977,NA17979,NA17980,NA17981,NA17982,NA17983,NA17986,NA17987,NA17988,NA17989,NA17990,NA17993,NA17995,NA17996,NA17997,NA17998,NA17999,NA18101,NA18102,NA18105,NA18106,NA18107,NA18108,NA18109,NA18112,NA18114,NA18117,NA18118,NA18122,NA18124,NA18125,NA18127,NA18128,NA18131,NA18132,NA18133,NA18134,NA18135,NA18138,NA18140,NA18141,NA18146,NA18147,NA18148,NA18149,NA18150,NA18151,NA18153,NA18154,NA18155,NA18156,NA18157,NA18158,NA18159,NA18160,NA18161,NA18162,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18499,NA18500,NA18501,NA18503,NA18505,NA18507,NA18508,NA18510,NA18515,NA18516,NA18517,NA18519,NA18526,NA18529,NA18532,NA18534,NA18536,NA18537,NA18543,NA18544,NA18545,NA18546,NA18550,NA18552,NA18555,NA18557,NA18558,NA18559,NA18561,NA18562,NA18563,NA18564,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18605,NA18608,NA18609,NA18610,NA18611,NA18612,NA18613,NA18614,NA18615,NA18616,NA18618,NA18619,NA18620,NA18621,NA18622,NA18624,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18640,NA18641,NA18642,NA18643,NA18645,NA18647,NA18670,NA18674,NA18682,NA18685,NA18689,NA18694,NA18696,NA18702,NA18704,NA18740,NA18745,NA18749,NA18853,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18868,NA18869,NA18871,NA18913,NA18914,NA18916,NA18917,NA18930,NA18934,NA18935,NA18939,NA18940,NA18942,NA18943,NA18944,NA18945,NA18946,NA18947,NA18948,NA18949,NA18951,NA18952,NA18954,NA18955,NA18956,NA18957,NA18959,NA18960,NA18962,NA18963,NA18964,NA18966,NA18967,NA18969,NA18970,NA18971,NA18973,NA18974,NA18975,NA18976,NA18977,NA18978,NA18979,NA18981,NA18987,NA18990,NA18991,NA18994,NA18995,NA18998,NA18999,NA19000,NA19001,NA19002,NA19005,NA19007,NA19009,NA19010,NA19027,NA19028,NA19031,NA19036,NA19041,NA19044,NA19046,NA19054,NA19056,NA19060,NA19062,NA19063,NA19064,NA19067,NA19068,NA19070,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19085,NA19086,NA19087,NA19088,NA19093,NA19094,NA19095,NA19096,NA19097,NA19107,NA19108,NA19109,NA19114,NA19116,NA19117,NA19121,NA19123,NA19127,NA19128,NA19129,NA19143,NA19146,NA19149,NA19151,NA19159,NA19160,NA19161,NA19175,NA19176,NA19179,NA19182,NA19183,NA19184,NA19185,NA19189,NA19190,NA19191,NA19192,NA19200,NA19201,NA19202,NA19204,NA19207,NA19208,NA19213,NA19221,NA19222,NA19223,NA19235,NA19236,NA19238,NA19240,NA19307,NA19308,NA19310,NA19311,NA19313,NA19314,NA19315,NA19316,NA19317,NA19319,NA19321,NA19327,NA19328,NA19334,NA19347,NA19350,NA19352,NA19371,NA19372,NA19373,NA19374,NA19375,NA19377,NA19379,NA19380,NA19382,NA19383,NA19384,NA19385,NA19390,NA19391,NA19393,NA19394,NA19396,NA19398,NA19399,NA19403,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19437,NA19439,NA19443,NA19444,NA19445,NA19448,NA19449,NA19452,NA19455,NA19457,NA19462,NA19463,NA19466,NA19467,NA19469,NA19470,NA19471,NA19474,NA19650,NA19651,NA19654,NA19657,NA19660,NA19662,NA19663,NA19664,NA19665,NA19669,NA19670,NA19671,NA19676,NA19678,NA19679,NA19680,NA19681,NA19682,NA19683,NA19684,NA19685,NA19700,NA19701,NA19702,NA19703,NA19704,NA19705,NA19711,NA19714,NA19716,NA19718,NA19719,NA19720,NA19721,NA19722,NA19723,NA19724,NA19725,NA19726,NA19727,NA19746,NA19748,NA19750,NA19755,NA19756,NA19757,NA19760,NA19762,NA19770,NA19771,NA19772,NA19774,NA19775,NA19776,NA19777,NA19778,NA19779,NA19780,NA19781,NA19782,NA19783,NA19784,NA19789,NA19790,NA19794,NA19795,NA19796,NA19834,NA19836,NA19901,NA19902,NA19904,NA19908,NA19909,NA19914,NA19915,NA19916,NA19918,NA19919,NA19921,NA19982,NA19983,NA19985,NA20126,NA20129,NA20281,NA20291,NA20292,NA20295,NA20297,NA20300,NA20319,NA20332,NA20334,NA20336,NA20337,NA20340,NA20342,NA20343,NA20346,NA20349,NA20350,NA20357,NA20358,NA20364,NA20504,NA20505,NA20506,NA20508,NA20509,NA20510,NA20512,NA20515,NA20516,NA20517,NA20519,NA20520,NA20521,NA20522,NA20524,NA20525,NA20527,NA20528,NA20529,NA20530,NA20531,NA20534,NA20538,NA20540,NA20541,NA20542,NA20543,NA20581,NA20582,NA20586,NA20588,NA20589,NA20752,NA20753,NA20754,NA20755,NA20756,NA20758,NA20759,NA20760,NA20761,NA20765,NA20766,NA20768,NA20769,NA20770,NA20771,NA20772,NA20773,NA20774,NA20778,NA20783,NA20785,NA20786,NA20787,NA20792,NA20795,NA20796,NA20797,NA20799,NA20800,NA20801,NA20802,NA20803,NA20804,NA20805,NA20806,NA20807,NA20809,NA20811,NA20812,NA20813,NA20815,NA20816,NA20818,NA20819,NA20826,NA20828,NA20845,NA20847,NA20849,NA20850,NA20851,NA20852,NA20853,NA20854,NA20858,NA20859,NA20861,NA20866,NA20870,NA20871,NA20873,NA20874,NA20875,NA20876,NA20879,NA20881,NA20883,NA20884,NA20885,NA20887,NA20888,NA20889,NA20890,NA20891,NA20892,NA20894,NA20895,NA20896,NA20897,NA20898,NA20899,NA20900,NA20901,NA20902,NA20903,NA20904,NA20906,NA20907,NA20908,NA20909,NA20911,NA21086,NA21088,NA21089,NA21090,NA21091,NA21092,NA21094,NA21097,NA21098,NA21100,NA21103,NA21104,NA21105,NA21106,NA21107,NA21108,NA21109,NA21111,NA21112,NA21113,NA21116,NA21117,NA21119,NA21125,NA21137,NA21141,NA21142,NA21143,NA21144,NA21295,NA21297,NA21300,NA21301,NA21302,NA21303,NA21307,NA21308,NA21309,NA21311,NA21312,NA21314,NA21316,NA21317,NA21318,NA21333,NA21336,NA21339,NA21344,NA21352,NA21353,NA21355,NA21357,NA21359,NA21360,NA21362,NA21365,NA21368,NA21370,NA21371,NA21378,NA21379,NA21381,NA21382,NA21383,NA21385,NA21390,NA21402,NA21405,NA21408,NA21414,NA21418,NA21420,NA21421,NA21423,NA21424,NA21425,NA21435,NA21436,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21448,NA21457,NA21473,NA21475,NA21476,NA21477,NA21479,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21491,NA21494,NA21509,NA21510,NA21512,NA21513,NA21514,NA21517,NA21519,NA21520,NA21521,NA21522,NA21523,NA21526,NA21527,NA21528,NA21529,NA21573,NA21575,NA21576,NA21577,NA21578,NA21580,NA21587,NA21596,NA21597,NA21599,NA21600,NA21601,NA21608,NA21611,NA21613,NA21614,NA21615,NA21616,NA21617,NA21619,NA21631,NA21634,NA21635,NA21636,NA21647,NA21648,NA21678,NA21682,NA21683,NA21685,NA21686,NA21689,NA21693,NA21716,NA21717,NA21718,NA21719,NA21722,NA21733,NA21738,NA21740,NA21741,NA21784,NA21825,NA21826 dgv4n50 1 150821800 150856676 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nsv511153,nsv511714 M 1 0 1 LCE3B,LCE3C 1 dgv76n67 1 150822121 150856810 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824698,nsv824686,nsv824675,nsv824709 M 31 0 26 LCE3B,LCE3C AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18969,NA18972,NA18973,NA18999 nsv821155 1 150822121 150856810 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420647 M 1 0 1 LCE3B,LCE3C NA10851 esv2764248 1 150822151 150863995 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006350,essv7006357,essv7006403,essv7006375,essv7006344,essv7006352,essv7006368,essv7006341,essv7006332,essv7006331,essv7006327,essv7006335,essv7006362,essv7006404,essv7006359,essv7006366,essv7006399,essv7006401,essv7006340,essv7006395,essv7006371,essv7006333,essv7006405,essv7006392,essv7006376,essv7006381,essv7006397,essv7006372,essv7006353,essv7006342,essv7006374,essv7006339,essv7006364,essv7006365,essv7006325,essv7006409,essv7006369,essv7006324,essv7006413,essv7006407,essv7006330,essv7006393,essv7006360,essv7006394,essv7006363,essv7006385,essv7006355,essv7006329,essv7006380,essv7006346,essv7006370,essv7006328,essv7006388,essv7006386,essv7006402,essv7006408,essv7006373,essv7006361,essv7006349,essv7006410,essv7006347,essv7006391,essv7006406,essv7006336,essv7006351,essv7006390,essv7006326,essv7006358,essv7006343,essv7006396,essv7006348,essv7006398,essv7006354,essv7006384,essv7006387,essv7006337,essv7006338,essv7006379,essv7006383,essv7006322,essv7006377,essv7006382 M 1109 1 81 LCE3A,LCE3B,LCE3C RW_0013,RW_0014,RW_0020,RW_0022,RW_0030,RW_0032,RW_0039,RW_0049,RW_0057,RW_0058,RW_0062,RW_0063,RW_0075,RW_0084,RW_0091,RW_0098,RW_0106,RW_0110,RW_0111,RW_0114,RW_0116,RW_0126,RW_0128,RW_0167,RW_0171,RW_0174,RW_0175,RW_0180,RW_0188,RW_0207,RW_0210,RW_0211,RW_0213,RW_0221,RW_0230,RW_0232,RW_0239,RW_0246,RW_0255,RW_0279,RW_0283,RW_0297,RW_0299,RW_0302,RW_0310,RW_0312,RW_0322,RW_0326,RW_0330,RW_0331,RW_0345,RW_0354,RW_0503,RW_0506,RW_0510,RW_0511,RW_0525,RW_0530,RW_0531,RW_0538,RW_0543,RW_0546,RW_0550,RW_0560,RW_0566,RW_0573,RW_0581,RW_0584,RW_0587,RW_0591,RW_0595,RW_0596,RW_0602,RW_0604,RW_0615,RW_0626,RW_0634,RW_0635,RW_0646,RW_0650,RW_0652,RW_0669 nsv498689 1 150822166 150854365 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585402 M 9 0 1 LCE3B,LCE3C esv25112 1 150822234 150856715 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11748 M 40 8 10 LCE3B,LCE3C NA11993,NA11995,NA12006,NA12239,NA12287,NA12776,NA12828,NA15510,NA18505,NA18511,NA18523,NA18909,NA18916,NA19099,NA19129,NA19147,NA19225,NA19257 nsv441941 1 150822330 150853218 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1618499,nssv1618429,nssv1618489,nssv1618478,nssv1618375,nssv1618363,nssv1618462,nssv1618460,nssv1618345,nssv1618483,nssv1618403,nssv1618406,nssv1618531,nssv1618446,nssv1618405,nssv1618392,nssv1618505,nssv1618509,nssv1618527,nssv1618510,nssv1618417,nssv1618442,nssv1618520,nssv1618518,nssv1618435,nssv1618440,nssv1618534,nssv1618426,nssv1618517,nssv1618395,nssv1618387,nssv1618471,nssv1618469,nssv1618476,nssv1618444,nssv1618362,nssv1618512,nssv1618373,nssv1618349,nssv1618404,nssv1618416,nssv1618467,nssv1618528,nssv1618455,nssv1618529,nssv1618452,nssv1618514,nssv1618358,nssv1618412,nssv1618465,nssv1618385,nssv1618431,nssv1618538,nssv1618357,nssv1618430,nssv1618391,nssv1618422,nssv1618485,nssv1618438,nssv1618477,nssv1618491,nssv1618415,nssv1618350,nssv1618377,nssv1618367,nssv1618449,nssv1618441,nssv1618386,nssv1618372,nssv1618382,nssv1618344,nssv1618423,nssv1618533,nssv1618526,nssv1618355,nssv1618432,nssv1618451,nssv1618498,nssv1618457,nssv1618359,nssv1618459,nssv1618378,nssv1618434,nssv1618411,nssv1618401,nssv1618468,nssv1618480,nssv1618503,nssv1618371,nssv1618447,nssv1618524,nssv1618473,nssv1618497,nssv1618410,nssv1618413,nssv1618474,nssv1618425,nssv1618511,nssv1618427,nssv1618436,nssv1618453,nssv1618351,nssv1618394,nssv1618495,nssv1618388,nssv1618346,nssv1618500,nssv1618347,nssv1618464,nssv1618408,nssv1618393,nssv1618537,nssv1618380,nssv1618384,nssv1618383,nssv1618496,nssv1618521,nssv1618472,nssv1618352,nssv1618515,nssv1618437,nssv1618539,nssv1618530,nssv1618348,nssv1618398,nssv1618490,nssv1618484,nssv1618481,nssv1618433,nssv1618402,nssv1618370,nssv1618369,nssv1618519,nssv1618418,nssv1618504,nssv1618475,nssv1618525,nssv1618513,nssv1618379,nssv1618421,nssv1618488,nssv1618420,nssv1618443,nssv1618463,nssv1618389,nssv1618454,nssv1618535,nssv1618399,nssv1618450,nssv1618407,nssv1618532,nssv1618343,nssv1618365,nssv1618501,nssv1618479,nssv1618482,nssv1618396,nssv1618502,nssv1618486,nssv1618353,nssv1618376,nssv1618522,nssv1618390,nssv1618493,nssv1618448,nssv1618424,nssv1618409,nssv1618366,nssv1618487,nssv1618361,nssv1618381,nssv1618494,nssv1618439,nssv1618516,nssv1618360,nssv1618364,nssv1618536,nssv1618400,nssv1618470,nssv1618507,nssv1618356,nssv1618368,nssv1618354,nssv1618508,nssv1618445,nssv1618397,nssv1618523,nssv1618456,nssv1618466,nssv1618461,nssv1618414,nssv1618458,nssv1618374,nssv1618492,nssv1618428,nssv1618506,nssv1618419 M 270 0 197 LCE3B,LCE3C NA06985,NA06991,NA06993,NA07000,NA07019,NA07029,NA07034,NA07048,NA07055,NA07056,NA07345,NA07348,NA07357,NA10830,NA10831,NA10838,NA10839,NA10846,NA10847,NA10851,NA10854,NA10855,NA10856,NA10857,NA10859,NA10860,NA10861,NA10863,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11992,NA11993,NA11994,NA12003,NA12004,NA12005,NA12006,NA12044,NA12056,NA12057,NA12144,NA12145,NA12146,NA12155,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12707,NA12716,NA12717,NA12750,NA12752,NA12753,NA12760,NA12761,NA12762,NA12763,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12865,NA12875,NA12878,NA12891,NA18500,NA18501,NA18502,NA18503,NA18505,NA18507,NA18508,NA18515,NA18516,NA18517,NA18522,NA18526,NA18529,NA18532,NA18537,NA18540,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18562,NA18563,NA18564,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18871,NA18913,NA18914,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18956,NA18959,NA18960,NA18964,NA18966,NA18967,NA18969,NA18970,NA18971,NA18973,NA18974,NA18975,NA18976,NA18978,NA18981,NA18987,NA18990,NA18991,NA18994,NA18995,NA18998,NA18999,NA19000,NA19005,NA19007,NA19012,NA19093,NA19094,NA19116,NA19127,NA19128,NA19129,NA19143,NA19145,NA19159,NA19160,NA19161,NA19192,NA19200,NA19201,NA19202,NA19204,NA19207,NA19208,NA19221,NA19222,NA19223,NA19238,NA19240 dgv425n100 1 150822407 150853206 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002417,nsv1006509,nsv998825,nsv1011391,nsv1002188,nsv1015016 M 29084 30 0 LCE3B,LCE3C dgv572n54 1 150822709 150840883 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547886,nsv547893 M 17421 2 0 LCE3C dgv573n54 1 150822709 150853560 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547888,nsv547887,nsv547892,nsv547894,nsv547896,nsv547895 M 17421 21 0 LCE3B,LCE3C nsv547891 1 150822709 151037070 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724513,nssv724512 M 17421 0 2 C1orf68,KPRP,LCE1D,LCE1E,LCE1F,LCE2A,LCE2B,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE4A esv29957 1 150823073 150852905 CNV loss Wheeler_et_al_2008 18421352 Oligo aCGH,Sequencing essv84196 M 3 0 1 LCE3C WATSON dgv426n100 1 150827480 150853206 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012330,nsv1004336,nsv1008223,nsv1000811,nsv1013645 M 29084 0 117 LCE3B,LCE3C dgv4n14 1 150828032 150850302 CNV loss Cooper_et_al_2008 18776910 SNP array nsv433467,nsv433478 M 9 0 2 LCE3C NA15510,NA19129 nsv469873 1 150829884 150980240 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1672283 M 265 0 1 C1orf68,LCE2A,LCE2B,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE4A dgv574n54 1 150834854 150853560 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547898,nsv547897 M 17421 2 0 LCE3B,LCE3C dgv427n100 1 150837972 150853206 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998212,nsv1002039,nsv1011089,nsv1010944 M 29084 32 0 LCE3B,LCE3C dgv428n100 1 150837972 150860993 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012970,nsv1004087,nsv1008349,nsv999537 M 29084 4 0 LCE3B,LCE3C nsv1000122 1 150838793 150853206 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487996,nssv3497334 M 29084 1 1 LCE3B,LCE3C nsv514007 1 150838880 150850880 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2850506,nssv2850422,nssv2850509,nssv2850498,nssv2850545,nssv2850478,nssv2850588,nssv2850390,nssv2849968,nssv2850624,nssv2850580,nssv2850535,nssv2850610,nssv2849962,nssv2850514,nssv2850459,nssv2850551,nssv2849928,nssv2850401,nssv2850575,nssv2850376,nssv2850557,nssv2850502,nssv2849934,nssv2850517,nssv2849960,nssv2850416,nssv2850536,nssv2850559,nssv2849925,nssv2850508,nssv2850407,nssv2849942,nssv2850521,nssv2850558,nssv2850378,nssv2850380,nssv2849930,nssv2850589,nssv2850612,nssv2849951,nssv2850436,nssv2850537,nssv2850593,nssv2850405,nssv2850501,nssv2850454,nssv2850452,nssv2850512,nssv2850415,nssv2850621,nssv2849937,nssv2849949,nssv2850462,nssv2850518,nssv2849965,nssv2850566,nssv2850552,nssv2850539,nssv2850622,nssv2850629,nssv2850340,nssv2850395,nssv2850560,nssv2850503,nssv2850607,nssv2850373,nssv2850412,nssv2850432,nssv2850353,nssv2850408,nssv2850384,nssv2850393,nssv2850523,nssv2850592,nssv2849958,nssv2850399,nssv2850458,nssv2850387,nssv2850404,nssv2850398,nssv2850603,nssv2850400,nssv2850573,nssv2849959,nssv2850530,nssv2850392,nssv2850601,nssv2850527,nssv2850448,nssv2850357,nssv2850429,nssv2850615,nssv2850389,nssv2850550,nssv2849950,nssv2850481,nssv2849944,nssv2850435,nssv2850364,nssv2850524,nssv2850582,nssv2849966,nssv2849924,nssv2850486,nssv2850345,nssv2850584,nssv2850467,nssv2849929,nssv2849957,nssv2850347,nssv2850420,nssv2850439,nssv2850449,nssv2850555,nssv2850548,nssv2850470,nssv2850428,nssv2850534,nssv2850576,nssv2850466,nssv2850468,nssv2850516,nssv2850563,nssv2850500,nssv2850626,nssv2849941,nssv2849943,nssv2850377,nssv2850351,nssv2850631,nssv2850578,nssv2849945,nssv2850379,nssv2850417,nssv2850440,nssv2850358,nssv2850510,nssv2850430,nssv2850542,nssv2850496,nssv2849955,nssv2850360,nssv2850469,nssv2850574,nssv2850487,nssv2850362,nssv2850490,nssv2850611,nssv2850419,nssv2850494,nssv2850367,nssv2849953,nssv2850617,nssv2850445,nssv2850411,nssv2850409,nssv2850507,nssv2850350,nssv2850495,nssv2850596,nssv2850410,nssv2850473,nssv2850421,nssv2849952,nssv2849922,nssv2849963,nssv2850489,nssv2850461,nssv2850493,nssv2850370,nssv2850590,nssv2850491,nssv2849940,nssv2850385,nssv2850618,nssv2850480,nssv2850513,nssv2849946,nssv2850572,nssv2850425,nssv2850374,nssv2849935,nssv2850569,nssv2850355,nssv2850348,nssv2850554,nssv2850371,nssv2850533,nssv2850538,nssv2850585,nssv2850605,nssv2850443,nssv2850463,nssv2850386,nssv2849947,nssv2849954,nssv2850526,nssv2850424,nssv2850342,nssv2850482,nssv2850475,nssv2850549,nssv2850450,nssv2850587,nssv2850570,nssv2850346,nssv2850447,nssv2850562,nssv2849967,nssv2850352,nssv2849961,nssv2850567,nssv2850406,nssv2850471,nssv2850525,nssv2850614,nssv2850497,nssv2850363,nssv2850460,nssv2850492,nssv2850499,nssv2850522,nssv2850484,nssv2850528,nssv2849933,nssv2849969,nssv2850564,nssv2850597,nssv2849948,nssv2850383,nssv2850418,nssv2850544,nssv2850613,nssv2850485,nssv2850627,nssv2850359,nssv2850356,nssv2850532,nssv2850366,nssv2850441,nssv2850464,nssv2850520,nssv2850504,nssv2849932,nssv2850381,nssv2850531,nssv2850579,nssv2850431,nssv2850598,nssv2849970,nssv2850609,nssv2850437,nssv2850365,nssv2850465,nssv2850375,nssv2850472,nssv2850388,nssv2850571,nssv2850423,nssv2850474,nssv2850623,nssv2850444,nssv2850620,nssv2850556,nssv2850599,nssv2849926,nssv2850427,nssv2850561,nssv2850438,nssv2850547,nssv2850403,nssv2850479,nssv2850483,nssv2849939,nssv2850515,nssv2850476,nssv2849938,nssv2850628,nssv2850594,nssv2849964,nssv2850546,nssv2850368,nssv2850581,nssv2850433,nssv2850586,nssv2850540,nssv2850616,nssv2850453,nssv2849956,nssv2850354,nssv2850344,nssv2850477,nssv2850446,nssv2850396,nssv2850543,nssv2850402,nssv2850630,nssv2850565,nssv2850343,nssv2850488,nssv2850434,nssv2850577,nssv2849931,nssv2850455,nssv2849936,nssv2850369,nssv2850505,nssv2850583,nssv2850361,nssv2850553,nssv2850529,nssv2850391,nssv2850382,nssv2850456,nssv2850349,nssv2850625,nssv2850442,nssv2850591,nssv2850397,nssv2850426,nssv2850457,nssv2850451,nssv2849923,nssv2850541,nssv2850519,nssv2850511,nssv2850604,nssv2850606,nssv2850595,nssv2850413,nssv2850608,nssv2849927,nssv2850602,nssv2850372,nssv2850394,nssv2850619,nssv2850600,nssv2850568,nssv2850414,nssv2850341 M 2366 0 341 LCE3C NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06995,NA07000,NA07014,NA07019,NA07031,NA07034,NA07037,NA07048,NA07055,NA07056,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10846,NA10847,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA12004,NA12005,NA12044,NA12056,NA12058,NA12144,NA12145,NA12146,NA12155,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12708,NA12716,NA12717,NA12718,NA12748,NA12749,NA12750,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12843,NA12875,NA12878,NA12891,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18499,NA18500,NA18501,NA18503,NA18507,NA18508,NA18510,NA18516,NA18517,NA18519,NA18522,NA18532,NA18537,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18859,NA18860,NA18861,NA18862,NA18863,NA18868,NA18869,NA18871,NA18907,NA18908,NA18916,NA18917,NA18930,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18956,NA18959,NA18960,NA18964,NA18966,NA18967,NA18969,NA18970,NA18971,NA18973,NA18974,NA18975,NA18978,NA18981,NA18987,NA18990,NA18991,NA18994,NA18995,NA18998,NA18999,NA19000,NA19005,NA19007,NA19012,NA19093,NA19094,NA19095,NA19096,NA19097,NA19107,NA19108,NA19109,NA19114,NA19116,NA19117,NA19121,NA19123,NA19127,NA19128,NA19129,NA19143,NA19145,NA19146,NA19149,NA19151,NA19159,NA19160,NA19161,NA19175,NA19177,NA19179,NA19182,NA19183,NA19184,NA19185,NA19189,NA19190,NA19191,NA19192,NA19200,NA19201,NA19202,NA19204,NA19207,NA19208,NA19221,NA19222,NA19223,NA19235,NA19236,NA19240,NA21301,NA21302,NA21303,NA21307,NA21309,NA21312,NA21316,NA21317,NA21344,NA21359,NA21360,NA21362,NA21365,NA21381,NA21382,NA21383,NA21390,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21475,NA21476,NA21477,NA21479,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21526,NA21580,NA21581,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv947446 1 150839621 150853593 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2766661,nssv2758974,nssv2763751,nssv2765263,nssv2762223,nssv2762980,nssv2759084,nssv2765737,nssv2758616 M 97 0 8 LCE3B,LCE3C HGDP00456,HGDP00521,HGDP00665,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv471350 1 150839832 150840115 CNV loss Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548044,nssv548046,nssv548047 M 3 0 3 LCE3C JDW,NA18507,YH esv3890660 1 150858808 150901825 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788238 M 3017 1 0 LCE3A nsv1005047 1 150902940 150923214 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489854 M 29084 0 1 LCE2C,LCE2D nsv8413 1 150909951 150913606 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22436 M 31 0 1 "" NA19007 nsv509480 1 150911068 150990779 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621104 M 4 1 0 C1orf68,LCE2A,LCE2B,LCE2C,LCE4A NA15510 nsv946392 1 150913707 150915066 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798111,nssv1798061,nssv1798072,nssv1798053,nssv1798091,nssv1798121,nssv1798099,nssv1798117,nssv1798074,nssv1798043,nssv1798123,nssv1798037,nssv1798083,nssv1798041,nssv1798095,nssv1798039,nssv1798106,nssv1798045,nssv1798081,nssv1798113,nssv1798075,nssv1798050,nssv1798094,nssv1798038,nssv1798080,nssv1798044,nssv1798077,nssv1798064,nssv1798102,nssv1798042,nssv1798107,nssv1798055,nssv1798131,nssv1798051,nssv1798092,nssv1798057,nssv1798073,nssv1798116,nssv1798104,nssv1798115,nssv1798082,nssv1798054,nssv1798036,nssv1798040,nssv1798086,nssv1798056,nssv1798125,nssv1798122,nssv1798130,nssv1798119,nssv1798127,nssv1798118,nssv1798105,nssv1798046,nssv1798089,nssv1798120,nssv1798066,nssv1798048,nssv1798132,nssv1798047,nssv1798129,nssv1798065,nssv1798110,nssv1798049,nssv1798100,nssv1798052,nssv1798069,nssv1798067,nssv1798108,nssv1798114,nssv1798103,nssv1798060,nssv1798085,nssv1798058,nssv1798076,nssv1798087,nssv1798071,nssv1798109,nssv1798059,nssv1798101,nssv1798088,nssv1798062,nssv1798063,nssv1798098,nssv1798097,nssv1798096,nssv1798084,nssv1798128,nssv1798112,nssv1798079,nssv1798078,nssv1798090,nssv1798124,nssv1798070,nssv1798068,nssv1798126,nssv1798093 M 97 10 0 LCE2C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2764247 1 150914536 150928004 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006415,essv7006414 M 1109 2 0 LCE2B,LCE2C RW_0101,RW_0664 nsv8424 1 150914861 150925581 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv19441 M 31 1 0 LCE2B,LCE2C NA19240 dgv215e59 1 150915252 150926150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3448512,esv3352073 M 185 2 0 LCE2B,LCE2C NA19238,NA19240 nsv2899 1 150915469 150924163 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1562 M 9 1 0 LCE2C NA19240 esv23526 1 150915491 150927049 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20569 M 40 1 0 LCE2B,LCE2C NA19240 nsv441715 1 150915736 150923166 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656770,nssv1656766,nssv1656767,nssv1656769,nssv1656768 M 270 5 0 "" NA18501,NA19143,NA19145,NA19238,NA19240 nsv514008 1 150916512 150922368 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2850638,nssv2850640,nssv2850646,nssv2850633,nssv2850641,nssv2850639,nssv2850632,nssv2850644,nssv2850651,nssv2850650,nssv2850648,nssv2850637,nssv2850645,nssv2850635,nssv2850643,nssv2850652,nssv2850642,nssv2850647,nssv2850636,nssv2850649,nssv2850634 M 2366 21 0 "" NA18485,NA18489,NA18501,NA18934,NA19143,NA19145,NA19185,NA19240,NA21307,NA21438,NA21439,NA21440,NA21441,NA21442,NA21476,NA21486,NA21487,NA21512,NA21514,NA21526,NA21615 nsv946393 1 150924523 150925876 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798150,nssv1797689,nssv1798138,nssv1797682,nssv1798147,nssv1797642,nssv1798153,nssv1797649,nssv1798134,nssv1797656,nssv1797694,nssv1797704,nssv1797643,nssv1797677,nssv1797692,nssv1797675,nssv1798141,nssv1797703,nssv1798139,nssv1797708,nssv1798152,nssv1797706,nssv1797698,nssv1797658,nssv1798136,nssv1797648,nssv1798148,nssv1797667,nssv1797695,nssv1797707,nssv1797699,nssv1797657,nssv1798154,nssv1797690,nssv1798142,nssv1797669,nssv1798151,nssv1797666,nssv1797701,nssv1797680,nssv1798137,nssv1797679,nssv1797646,nssv1797641,nssv1798144,nssv1797663,nssv1798143,nssv1797672,nssv1797640,nssv1797688,nssv1798140,nssv1797705,nssv1798146,nssv1797687,nssv1798135,nssv1797654,nssv1797696,nssv1797645,nssv1797700,nssv1798156,nssv1797697,nssv1797664,nssv1798149,nssv1797691,nssv1798157,nssv1797651,nssv1798155,nssv1797711,nssv1797693,nssv1797647,nssv1797644,nssv1797678,nssv1798145,nssv1797676,nssv1797655,nssv1798133,nssv1797662,nssv1797659,nssv1797652,nssv1797674,nssv1797681,nssv1797670,nssv1797650,nssv1797660,nssv1797686,nssv1797665,nssv1797683,nssv1797685,nssv1797668,nssv1797671,nssv1797709,nssv1797710,nssv1797673,nssv1797653,nssv1797684,nssv1797661,nssv1797702 M 97 10 0 LCE2B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv34854 1 150938537 151023430 CNV gain Pinto_et_al_2007 17911159 SNP array essv6980446,essv6980447 M 771 2 0 C1orf68,KPRP,LCE1F,LCE2A,LCE4A NA19193 nsv818478 1 150938629 151001420 CNV gain Wang_et_al_2007 17921354 SNP array nssv1418427 M 112 1 0 C1orf68,KPRP,LCE4A NA19193 nsv547899 1 150938629 151511706 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724535 M 17421 1 0 C1orf68,IVL,KPRP,LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE4A,LCE6A,LELP1,LOR,PRR9,SMCP,SPRR1A,SPRR1B,SPRR2A,SPRR2B,SPRR2C,SPRR2D,SPRR2E,SPRR2F,SPRR2G,SPRR3,SPRR4 esv2763813 1 150953682 151047146 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7001155,essv7001488,essv7001144,essv7001055,essv7001333,essv7000933,essv7000922,essv7001411,essv7001100,essv7001399,essv7000811,essv7000833,essv7001000,essv7000767,essv7000878,essv7001422,essv7000900,essv7001433,essv7001133,essv7001366,essv7001200,essv7000621,essv7000610,essv7000800,essv7000844,essv7000644,essv7000666,essv7000655,essv7000633,essv7001266,essv7000856,essv7001222,essv7001233,essv7001444,essv7001066,essv7000688,essv7000822,essv7000732,essv7000789,essv7001455,essv7000911,essv7001288,essv7001466,essv7001211,essv7001477,essv7001377,essv7001166,essv7001344,essv7001111,essv7001277,essv7000867,essv7001244,essv7000756,essv7001022,essv7001033,essv7001300,essv7000978,essv7001177,essv7000677,essv7001255,essv7001388,essv7000710,essv7000967,essv7000944,essv7000778,essv7001189,essv7001122,essv7001355,essv7001011,essv7001078,essv7000989,essv7001311,essv7000889,essv7000745,essv7000699,essv7001044,essv7000955,essv7001322,essv7000721,essv7001089 M 1109 0 80 C1orf68,KPRP,LCE1C,LCE1D,LCE1E,LCE1F SW_0048,SW_0060,SW_0072,SW_0099,SW_0121,SW_0145,SW_0165,SW_0170,SW_0172,SW_0243,SW_0268,SW_0339,SW_0353,SW_0379,SW_0618,SW_0628,SW_0636,SW_0646,SW_0775,SW_0789,SW_0803,SW_0817,SW_0830,SW_0832,SW_0833,SW_0846,SW_0869,SW_0872,SW_0885,SW_1009,SW_1012,SW_1013,SW_1029,SW_1034,SW_1045,SW_1053,SW_1058,SW_1067,SW_1072,SW_1096,SW_1097,SW_1102,SW_1116,SW_1132,SW_1167,SW_1168,SW_1171,SW_1176,SW_1184,SW_1188,SW_1224,SW_1274,SW_1278,SW_1279,SW_1281,SW_1285,SW_1293,SW_1298,SW_1304,SW_1308,SW_1323,SW_1332,SW_1333,SW_1358,SW_1366,SW_1368,SW_1372,SW_1387,SW_1396,SW_1407,SW_1415,SW_1419,SW_1431,SW_1459,SW_1468,SW_1469,SW_1501,SW_1517,SW_1523,SW_1535 nsv1000648 1 150985942 151013750 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502045,nssv3484204 M 29084 2 0 KPRP nsv508615 1 150990779 151054127 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618989,nssv622777 M 4 0 2 KPRP,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F NA10860,NA18994 nsv1004884 1 150991138 151047146 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489253 M 29084 1 0 KPRP,LCE1C,LCE1D,LCE1E,LCE1F nsv1005867 1 151011573 151035312 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501505,nssv3488232 M 29084 0 2 LCE1E,LCE1F dgv429n100 1 151011573 151045485 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014190,nsv1009988,nsv1001837,nsv1010924,nsv1011430,nsv997705,nsv1010895,nsv998888 M 29084 26 0 LCE1C,LCE1D,LCE1E,LCE1F nsv79 1 151013059 151040222 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv79 M 1 0 1 LCE1D,LCE1E,LCE1F NA15510 nsv2910 1 151013059 151041038 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3399,nssv11089 M 9 0 2 LCE1D,LCE1E,LCE1F NA12878,NA15510 dgv430n100 1 151016357 151029681 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001012,nsv1002796 M 29084 3 0 LCE1E dgv431n100 1 151016357 151035312 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001721,nsv1003849,nsv1004508,nsv1009915,nsv1000650 M 29084 9 0 LCE1E dgv432n100 1 151016357 151128490 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009885,nsv999918 M 29084 2 0 LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE6A,SMCP nsv1009758 1 151017849 151040529 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502036,nssv3488252,nssv3499187,nssv3495983 M 29084 3 1 LCE1D,LCE1E dgv433n100 1 151021254 151034971 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001998,nsv1011877,nsv1009870,nsv1001922,nsv998434,nsv1013364 M 29084 19 0 LCE1E dgv434n100 1 151021254 151035312 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004337,nsv1003430,nsv999851 M 29084 88 76 LCE1E dgv435n100 1 151021254 151045485 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007168,nsv1001695,nsv1015026 M 29084 30 0 LCE1C,LCE1D,LCE1E nsv1011806 1 151024314 151034871 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3703837,nssv3500590,nssv3492575 M 29084 0 3 LCE1E dgv436n100 1 151024314 151040529 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003487,nsv1004075,nsv1001456,nsv1013454 M 29084 358 33 LCE1D,LCE1E esv2764262 1 151024314 151040529 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006419,essv7006427,essv7006440,essv7006474,essv7006432,essv7006421,essv7006455,essv7006420,essv7006464,essv7006466,essv7006475,essv7006443,essv7006422,essv7006442,essv7006473,essv7006463,essv7006462,essv7006451,essv7006472,essv7006448,essv7006417,essv7006418,essv7006484,essv7006428,essv7006485,essv7006471,essv7006481,essv7006416,essv7006457,essv7006450,essv7006446,essv7006424,essv7006447,essv7006477,essv7006429,essv7006470,essv7006437,essv7006482,essv7006430,essv7006479,essv7006488,essv7006449,essv7006433,essv7006487,essv7006490,essv7006439,essv7006426,essv7006441,essv7006461,essv7006459,essv7006486,essv7006465,essv7006460,essv7006469,essv7006454,essv7006438,essv7006453,essv7006468,essv7006435,essv7006480,essv7006431,essv7006452,essv7006491,essv7006492,essv7006425,essv7006483,essv7006436,essv7006476,essv7006444,essv7006458 M 1109 1 69 LCE1D,LCE1E RW_0002,RW_0003,RW_0005,RW_0006,RW_0007,RW_0012,RW_0017,RW_0018,RW_0023,RW_0025,RW_0028,RW_0030,RW_0032,RW_0073,RW_0099,RW_0125,RW_0154,RW_0166,RW_0167,RW_0169,RW_0190,RW_0192,RW_0193,RW_0197,RW_0202,RW_0209,RW_0212,RW_0217,RW_0233,RW_0239,RW_0243,RW_0246,RW_0248,RW_0252,RW_0255,RW_0258,RW_0262,RW_0277,RW_0284,RW_0292,RW_0300,RW_0304,RW_0307,RW_0308,RW_0310,RW_0324,RW_0334,RW_0341,RW_0349,RW_0358,RW_0361,RW_0508,RW_0520,RW_0521,RW_0527,RW_0539,RW_0562,RW_0573,RW_0593,RW_0601,RW_0604,RW_0613,RW_0614,RW_0618,RW_0631,RW_0635,RW_0637,RW_0650,RW_0652,RW_0666 dgv437n100 1 151024314 151045485 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009311,nsv1010711,nsv999218,nsv1012524,nsv1011312,nsv1012369,nsv1003149,nsv999543 M 29084 133 24 LCE1C,LCE1D,LCE1E nsv435711 1 151025966 151039071 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465850 M 2 0 1 LCE1D,LCE1E NA15510 esv992673 1 151025995 151038732 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565180 M 3 0 1 LCE1D,LCE1E HuRef nsv8436 1 151026172 151037502 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv21406,nssv19771,nssv22764,nssv21065,nssv21405,nssv21414,nssv22099,nssv25724,nssv19765,nssv21771,nssv20081,nssv26401,nssv20736,nssv22102,nssv25174,nssv21397,nssv21417,nssv27410,nssv25709,nssv18778,nssv21070 M 31 20 1 LCE1D,LCE1E NA10847,NA10863,NA11830,NA12802,NA12872,NA18517,NA18537,NA18552,NA18564,NA18572,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 esv2535964 1 151026210 151038065 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5216224 M 1 0 1 LCE1D,LCE1E NA18507 dgv14n17 1 151026302 151040529 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437191,nsv437180 M 60 0 2 LCE1D,LCE1E NA10851,NA10855 esv2444007 1 151026489 151038611 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5253712 M 1 0 1 LCE1D,LCE1E NA18507 esv24425 1 151026713 151037738 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12772 M 40 21 2 LCE1D,LCE1E NA06985,NA11931,NA11993,NA11995,NA12044,NA12239,NA12287,NA12489,NA12878,NA18505,NA18517,NA18523,NA18858,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 dgv77n67 1 151026713 151038291 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824731,nsv824720,nsv824742 M 31 0 4 LCE1D,LCE1E AK16,AK20,AK8,NA18999 nsv820665 1 151026713 151038291 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420658 M 1 0 1 LCE1D,LCE1E NA10851 dgv575n54 1 151026969 151033864 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547901,nsv547900 M 17421 3 0 LCE1E dgv576n54 1 151026969 151037070 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547903,nsv547902,nsv547907 M 17421 13 0 LCE1D,LCE1E nsv498690 1 151026969 151037500 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585403 M 9 0 1 LCE1D,LCE1E dgv577n54 1 151027024 151037070 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547918,nsv547917,nsv547916,nsv547910,nsv547904,nsv547909,nsv547915,nsv547911,nsv547914,nsv547913 M 17421 0 23 LCE1D,LCE1E dgv5n50 1 151027143 151037934 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nsv511154,nsv511715 M 1 0 1 LCE1D,LCE1E 1 nsv547905 1 151027252 151034336 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724551 M 17421 0 1 LCE1E dgv578n54 1 151027252 151036431 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547906,nsv547912 M 17421 3 246 LCE1D,LCE1E nsv947447 1 151027252 151036756 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2766145,nssv2761210 M 97 0 2 LCE1D,LCE1E HGDP00665,HGDP01284 nsv514009 1 151027712 151036800 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2848946,nssv2848930,nssv2849003,nssv2848949,nssv2850653,nssv2848894,nssv2848906,nssv2848985,nssv2848915,nssv2848916,nssv2849008,nssv2850662,nssv2850663,nssv2848923,nssv2848887,nssv2848954,nssv2849019,nssv2850659,nssv2850656,nssv2848947,nssv2848945,nssv2850655,nssv2848960,nssv2848998,nssv2848878,nssv2848959,nssv2848896,nssv2848974,nssv2848884,nssv2848970,nssv2848897,nssv2848976,nssv2848986,nssv2849018,nssv2848864,nssv2848882,nssv2848953,nssv2848941,nssv2849009,nssv2848966,nssv2848955,nssv2848876,nssv2848972,nssv2848867,nssv2848995,nssv2848936,nssv2849022,nssv2848903,nssv2848883,nssv2848962,nssv2848888,nssv2848956,nssv2848926,nssv2848944,nssv2848919,nssv2848890,nssv2848981,nssv2849029,nssv2848865,nssv2848984,nssv2848934,nssv2848886,nssv2848922,nssv2848979,nssv2848951,nssv2849007,nssv2850674,nssv2848920,nssv2850668,nssv2848881,nssv2848935,nssv2848942,nssv2848939,nssv2848958,nssv2848871,nssv2849004,nssv2848913,nssv2850657,nssv2848975,nssv2848874,nssv2848950,nssv2848963,nssv2850665,nssv2848911,nssv2848908,nssv2849014,nssv2850672,nssv2848924,nssv2850671,nssv2848967,nssv2848907,nssv2848988,nssv2848993,nssv2848989,nssv2848968,nssv2849016,nssv2848869,nssv2848980,nssv2848948,nssv2848895,nssv2848943,nssv2848898,nssv2848900,nssv2849001,nssv2849030,nssv2849017,nssv2849010,nssv2848899,nssv2848873,nssv2848933,nssv2850673,nssv2848957,nssv2850666,nssv2850669,nssv2849023,nssv2850667,nssv2848929,nssv2848917,nssv2848866,nssv2848870,nssv2850658,nssv2848914,nssv2848918,nssv2848880,nssv2848978,nssv2848971,nssv2850654,nssv2848931,nssv2848877,nssv2850664,nssv2849012,nssv2848990,nssv2849000,nssv2848901,nssv2850670,nssv2848928,nssv2849002,nssv2848921,nssv2849005,nssv2848889,nssv2848997,nssv2849020,nssv2848961,nssv2848893,nssv2848937,nssv2848969,nssv2848910,nssv2848964,nssv2848952,nssv2848987,nssv2848902,nssv2848973,nssv2848983,nssv2848909,nssv2848965,nssv2850661,nssv2848977,nssv2849026,nssv2849011,nssv2848904,nssv2848932,nssv2848875,nssv2848872,nssv2849006,nssv2848879,nssv2848891,nssv2848927,nssv2848982,nssv2849027,nssv2849025,nssv2848999,nssv2848938,nssv2849024,nssv2849031,nssv2848994,nssv2848940,nssv2849028,nssv2849015,nssv2848996,nssv2848925,nssv2848885,nssv2849021,nssv2848905,nssv2848892,nssv2849013,nssv2848992,nssv2848991,nssv2848868,nssv2850660,nssv2848912 M 2366 0 190 LCE1D NA06984,NA06986,NA06989,NA06995,NA07000,NA07034,NA07037,NA07048,NA07051,NA07056,NA07347,NA07348,NA07349,NA07357,NA10831,NA10836,NA10837,NA10839,NA10840,NA10851,NA10855,NA10856,NA10860,NA11829,NA11831,NA11832,NA11843,NA11892,NA11894,NA11918,NA11919,NA11930,NA11993,NA11994,NA12004,NA12056,NA12058,NA12144,NA12155,NA12234,NA12236,NA12248,NA12249,NA12264,NA12273,NA12274,NA12275,NA12282,NA12286,NA12329,NA12341,NA12343,NA12344,NA12348,NA12375,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12708,NA12716,NA12718,NA12740,NA12749,NA12750,NA12752,NA12761,NA12766,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12830,NA12832,NA12843,NA12878,NA12891,NA12892,NA18486,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18518,NA18519,NA18563,NA18605,NA18620,NA18621,NA18853,NA18861,NA18862,NA18863,NA18868,NA18869,NA18871,NA18872,NA18874,NA18875,NA18908,NA18910,NA18911,NA18916,NA18924,NA18930,NA18933,NA18935,NA18945,NA18966,NA18974,NA18991,NA18994,NA18998,NA19095,NA19097,NA19102,NA19103,NA19107,NA19109,NA19118,NA19130,NA19140,NA19149,NA19153,NA19160,NA19161,NA19174,NA19175,NA19177,NA19184,NA19185,NA19186,NA19190,NA19191,NA19200,NA19202,NA19204,NA19205,NA19210,NA19211,NA19235,NA19236,NA19237,NA21303,NA21309,NA21317,NA21360,NA21361,NA21365,NA21366,NA21384,NA21386,NA21387,NA21388,NA21389,NA21391,NA21400,NA21401,NA21441,NA21453,NA21455,NA21478,NA21480,NA21485,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21523,NA21524,NA21525,NA21580,NA21581,NA21599 nsv547908 1 151027995 151034336 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724558,nssv724559,nssv724560,nssv724561,nssv724562,nssv724563 M 17421 1 5 "" nsv438059 1 151027995 151036431 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469141,nssv469152,nssv469208,nssv469230,nssv469186,nssv469174,nssv469130,nssv469241,nssv469219,nssv469163,nssv469197 M 269 0 10 LCE1D NA07034,NA07048,NA10851,NA10855,NA10856,NA11829,NA11832,NA12057,NA19210,NA19211 dgv438n100 1 151028535 151047146 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009101,nsv1007453,nsv1001106,nsv1004936,nsv1008259,nsv1007478,nsv1014459,nsv1001003,nsv997985,nsv1013589,nsv1005539,nsv997907,nsv1013577,nsv1000111,nsv1008862 M 29084 41 0 LCE1C,LCE1D dgv439n100 1 151028535 151054331 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012943,nsv1010346 M 29084 2 0 LCE1B,LCE1C,LCE1D esv2421553 1 151028547 151035324 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5090429,essv5080874,essv5024680,essv5011272,essv5102824,essv5091282,essv5076398,essv5030788,essv5008569,essv5157803,essv5117983,essv5042557,essv5111553,essv5019324,essv5092451,essv5016638,essv5023200,essv5031111,essv5150658,essv5028137,essv5104265,essv5011049,essv5021641,essv5095629,essv5079616,essv5120368,essv5128506,essv5013141,essv5104694,essv5156484,essv5100531,essv5093354,essv5126384,essv5043592,essv5046705,essv5138170,essv5103307,essv5089394,essv5121599,essv5029721,essv5006843,essv5085422,essv5016910,essv5144842,essv5128197,essv5048919,essv5040026,essv5053102,essv5011709,essv5077109,essv5125808,essv5126425,essv5122064,essv5022560,essv5065633,essv5086625,essv5052031,essv5149948,essv5053839,essv5142907,essv5137364,essv5047834,essv5087228,essv5036664,essv5085832,essv5114311,essv5067884,essv5114847,essv5045782,essv5003804,essv5038962,essv5043090,essv5143556,essv5035724,essv5094493,essv5067606,essv5052531,essv5070562,essv5148438,essv5053954,essv5100323,essv5151136,essv5029125,essv5130878,essv5021414,essv5129979,essv5103297,essv5143369,essv5076535,essv5130648,essv5123404,essv5102684,essv5070435,essv5043903,essv5058390,essv5115952,essv5089381,essv5061389,essv5126917,essv5161195,essv5093598,essv5041885,essv5037271,essv5057051,essv5131754,essv5137920,essv5096932,essv5140815,essv5108488,essv5034823,essv5060364,essv5047267,essv5014142,essv5110493,essv5121722,essv5139180,essv5013066,essv5088605,essv5023238,essv5068323,essv5034219,essv5137502,essv5136600,essv5021266,essv5087856,essv5160409,essv5027348,essv5060239,essv5038943,essv5051907,essv5134887,essv5098734,essv5076457,essv5084955,essv5025018,essv5063046,essv5112234,essv5054500,essv5084305,essv5036748,essv5143028,essv5140211,essv5004620,essv5003993,essv5088317,essv5008720,essv5038922,essv5122831,essv5076197,essv5067530,essv5045087,essv5073126,essv5054254,essv5051753,essv5108732,essv5067524,essv5014419,essv5104226,essv5044598,essv5089933,essv5088615,essv5058158,essv5044629,essv5123716,essv5151606,essv5129069,essv5001935,essv5003850,essv5014007,essv5095074,essv5112192,essv5017403,essv5024965,essv5144675,essv5091896,essv5040644,essv5080912,essv5092743,essv5122095,essv5060630,essv5009147,essv5082063,essv5122148,essv5043474,essv5161055,essv5002690,essv5085694,essv5012982,essv5118410,essv5136918,essv5102681,essv5099490,essv5054720,essv5044180,essv5028930,essv5062678,essv5142685,essv5103788,essv5071669,essv5147967,essv5072398,essv5097372,essv5044387,essv5066698,essv5035449,essv5030277,essv5067358,essv5043800,essv5007910,essv5050232,essv5086812,essv5106064,essv5030889,essv5024058,essv5119667,essv5125316,essv5061264,essv5035411,essv5138186,essv5056374,essv5136491,essv5134565,essv5045857,essv5054543,essv5127140,essv5034745,essv5080565,essv5064333,essv5059670,essv5088387,essv5059179,essv5066404,essv5160824,essv5022353,essv5106731,essv5003398,essv5135117,essv5129107,essv5134650,essv5002336,essv5049213,essv5084116,essv5151283,essv5038758,essv5066829,essv5144222,essv5136492,essv5020945,essv5155397,essv5106559,essv5143714,essv5064023,essv5060002,essv5026406,essv5062713,essv5131711,essv5016324,essv5106347,essv5103585,essv5072685,essv5151097,essv5123125,essv5063264,essv5043675,essv5099770,essv5044797,essv5063276,essv5039549,essv5039218,essv5131270,essv5143739,essv5050891,essv5155951,essv5105224,essv5026106,essv5117143,essv5060080,essv5074492,essv5005204,essv5134025,essv5090888,essv5019248,essv5151629,essv5041950,essv5124494,essv5099657,essv5051191,essv5080147,essv5112975,essv5108858,essv5052655,essv5016414,essv5132625,essv5117533,essv5097375,essv5092070,essv5033336,essv5126261,essv5061415,essv5034764,essv5118984,essv5007090,essv5080414,essv5081914,essv5104058,essv5104513,essv5125841,essv5033890,essv5116910,essv5036814,essv5013623,essv5147777,essv5002357,essv5083992,essv5159451,essv5159424,essv5123225,essv5035157,essv5062522,essv5097272,essv5010452,essv5020265,essv5109016,essv5153480,essv5101381,essv5084979,essv5152274,essv5104557,essv5050838,essv5046183,essv5092365,essv5076971,essv5050085,essv5106234,essv5084174,essv5118115,essv5037585,essv5142621,essv5025625,essv5014467,essv5136018,essv5113845,essv5111404,essv5096146,essv5154112,essv5058870,essv5048167,essv5152929,essv5074381,essv5088888,essv5060361,essv5098616,essv5143770,essv5120587,essv5003408,essv5065565,essv5062267,essv5123700,essv5006222,essv5134061,essv5111825,essv5084346,essv5047439,essv5022016,essv5006175,essv5018688,essv5081826,essv5046173,essv5009395,essv5003047,essv5149785,essv5123742,essv5099694,essv5032516,essv5152193,essv5010665,essv5154328,essv5014657,essv5078767,essv5041348,essv5100194,essv5016999,essv5047679,essv5134380,essv5143095,essv5083913,essv5108962,essv5155875,essv5011160,essv5017486,essv5068447,essv5006249,essv5149328,essv5017832,essv5043246,essv5069257,essv5104260,essv5041451,essv5135453,essv5041473,essv5003117,essv5107663,essv5139806,essv5053658,essv5139375,essv5062083,essv5085782,essv5089461,essv5093241,essv5142519,essv5017105,essv5126603,essv5030010,essv5074359,essv5105618,essv5068931,essv5154695,essv5150646,essv5160484,essv5039605,essv5082182,essv5159946,essv5124792,essv5124525,essv5104516 M 1184 0 425 "" NA06984,NA06986,NA06989,NA06995,NA06997,NA07000,NA07029,NA07037,NA07045,NA07051,NA07056,NA07345,NA07347,NA07348,NA07349,NA07357,NA10831,NA10836,NA10837,NA10839,NA10840,NA10853,NA10855,NA10856,NA10861,NA10865,NA11829,NA11831,NA11832,NA11843,NA11891,NA11892,NA11894,NA11918,NA11919,NA11930,NA11993,NA11994,NA12003,NA12006,NA12056,NA12057,NA12144,NA12155,NA12234,NA12248,NA12249,NA12264,NA12273,NA12275,NA12282,NA12286,NA12341,NA12343,NA12344,NA12348,NA12375,NA12383,NA12386,NA12399,NA12400,NA12708,NA12716,NA12718,NA12740,NA12749,NA12750,NA12752,NA12761,NA12762,NA12766,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12830,NA12832,NA12843,NA12878,NA12891,NA12892,NA18109,NA18138,NA18486,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18518,NA18519,NA18563,NA18605,NA18620,NA18621,NA18638,NA18853,NA18861,NA18862,NA18863,NA18868,NA18869,NA18871,NA18874,NA18875,NA18910,NA18911,NA18912,NA18916,NA18924,NA18930,NA18933,NA18935,NA18945,NA18954,NA18966,NA18974,NA18991,NA18994,NA18998,NA19035,NA19046,NA19078,NA19095,NA19097,NA19102,NA19103,NA19107,NA19109,NA19118,NA19130,NA19140,NA19149,NA19153,NA19160,NA19161,NA19174,NA19175,NA19176,NA19184,NA19185,NA19186,NA19190,NA19191,NA19200,NA19202,NA19204,NA19210,NA19211,NA19235,NA19236,NA19237,NA19317,NA19318,NA19319,NA19321,NA19347,NA19352,NA19360,NA19372,NA19374,NA19376,NA19377,NA19379,NA19380,NA19381,NA19384,NA19385,NA19390,NA19396,NA19397,NA19398,NA19399,NA19403,NA19404,NA19430,NA19435,NA19437,NA19440,NA19445,NA19446,NA19451,NA19457,NA19462,NA19469,NA19472,NA19473,NA19651,NA19653,NA19664,NA19665,NA19675,NA19678,NA19681,NA19682,NA19683,NA19684,NA19708,NA19713,NA19714,NA19719,NA19720,NA19721,NA19722,NA19723,NA19724,NA19749,NA19750,NA19759,NA19760,NA19761,NA19770,NA19772,NA19773,NA19776,NA19778,NA19779,NA19780,NA19789,NA19790,NA19819,NA19828,NA19834,NA19836,NA19901,NA19902,NA19904,NA19909,NA19914,NA19915,NA19917,NA19918,NA19919,NA19982,NA19983,NA19985,NA20126,NA20128,NA20129,NA20277,NA20279,NA20288,NA20295,NA20297,NA20317,NA20332,NA20333,NA20334,NA20342,NA20344,NA20345,NA20346,NA20357,NA20360,NA20364,NA20504,NA20505,NA20508,NA20509,NA20510,NA20512,NA20515,NA20516,NA20517,NA20519,NA20520,NA20521,NA20522,NA20524,NA20525,NA20527,NA20529,NA20530,NA20531,NA20534,NA20543,NA20544,NA20581,NA20582,NA20586,NA20588,NA20752,NA20753,NA20755,NA20756,NA20758,NA20759,NA20761,NA20769,NA20771,NA20773,NA20774,NA20783,NA20785,NA20787,NA20792,NA20795,NA20797,NA20799,NA20800,NA20804,NA20805,NA20808,NA20810,NA20811,NA20812,NA20813,NA20818,NA20826,NA20828,NA20845,NA20853,NA20854,NA20858,NA20859,NA20875,NA20881,NA20884,NA20885,NA20888,NA20889,NA20890,NA20891,NA20899,NA20900,NA20901,NA20902,NA20904,NA20906,NA20907,NA20911,NA21089,NA21090,NA21092,NA21094,NA21097,NA21098,NA21099,NA21104,NA21105,NA21107,NA21108,NA21112,NA21116,NA21117,NA21119,NA21123,NA21125,NA21137,NA21143,NA21303,NA21307,NA21308,NA21309,NA21317,NA21318,NA21333,NA21339,NA21355,NA21356,NA21360,NA21361,NA21365,NA21366,NA21371,NA21378,NA21379,NA21384,NA21386,NA21387,NA21388,NA21389,NA21391,NA21400,NA21401,NA21421,NA21424,NA21435,NA21436,NA21441,NA21453,NA21455,NA21457,NA21473,NA21478,NA21480,NA21485,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21519,NA21523,NA21524,NA21525,NA21528,NA21580,NA21596,NA21599,NA21613,NA21620,NA21631,NA21632,NA21650,NA21683,NA21722,NA21739,NA21741,NA21768,NA21776,NA21784,NA21825 esv3584612 1 151028547 151035324 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838099,essv9838100 M 34 0 2 "" KSM003,KSM008 nsv441973 1 151028547 151035324 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1618540,nssv1618566,nssv1618583,nssv1618601,nssv1618614,nssv1618592,nssv1618580,nssv1618561,nssv1618593,nssv1618610,nssv1618568,nssv1618573,nssv1618608,nssv1618594,nssv1618569,nssv1618607,nssv1618571,nssv1618543,nssv1618585,nssv1618547,nssv1618600,nssv1618613,nssv1618617,nssv1618546,nssv1618589,nssv1618611,nssv1618555,nssv1618619,nssv1618586,nssv1618605,nssv1618554,nssv1618588,nssv1618598,nssv1618567,nssv1618549,nssv1618584,nssv1618596,nssv1618552,nssv1618615,nssv1618612,nssv1618556,nssv1618590,nssv1618616,nssv1618565,nssv1618550,nssv1618563,nssv1618551,nssv1618581,nssv1618557,nssv1618560,nssv1618582,nssv1618570,nssv1618564,nssv1618606,nssv1618595,nssv1618545,nssv1618597,nssv1618587,nssv1618558,nssv1618574,nssv1618548,nssv1618542,nssv1618553,nssv1618578,nssv1618602,nssv1618575,nssv1618541,nssv1618559,nssv1618618,nssv1618544,nssv1618576,nssv1618579,nssv1618609,nssv1618604,nssv1618572,nssv1618603,nssv1618577,nssv1618599,nssv1618562,nssv1618591 M 270 0 80 "" NA07000,NA07029,NA07034,NA07048,NA07056,NA07345,NA07348,NA07357,NA10831,NA10839,NA10851,NA10855,NA10856,NA10860,NA10861,NA11829,NA11831,NA11832,NA11993,NA11994,NA12003,NA12004,NA12006,NA12056,NA12057,NA12144,NA12155,NA12234,NA12236,NA12248,NA12249,NA12264,NA12716,NA12740,NA12750,NA12752,NA12761,NA12762,NA12801,NA12802,NA12813,NA12814,NA12815,NA12878,NA12891,NA12892,NA18502,NA18504,NA18506,NA18507,NA18508,NA18563,NA18605,NA18620,NA18621,NA18853,NA18861,NA18862,NA18863,NA18871,NA18912,NA18945,NA18966,NA18974,NA18991,NA18994,NA18998,NA19102,NA19103,NA19130,NA19140,NA19153,NA19160,NA19161,NA19200,NA19202,NA19204,NA19205,NA19210,NA19211 dgv440n100 1 151028551 151040529 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000963,nsv1006333,nsv997353,nsv1013576,nsv1000859,nsv1013491,nsv1002735,nsv1008714,nsv1006286,nsv1010066,nsv998338 M 29084 60 0 LCE1D nsv1012573 1 151029006 151045485 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496453 M 29084 0 1 LCE1C,LCE1D nsv433489 1 151030580 151033105 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463370 M 9 0 1 "" NA12878 nsv547919 1 151030580 151036431 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724831,nssv724832 M 17421 0 2 LCE1D dgv78n67 1 151032740 151033260 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824753,nsv824764 M 31 2 0 "" NA18969,NA18997 nsv471351 1 151035851 151037281 CNV loss Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548048,nssv548049 M 3 0 2 LCE1D JDW,NA18507 nsv1010576 1 151058340 151094276 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490290 M 29084 0 1 LCE1A,LCE6A nsv1008447 1 151077795 151120372 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496014 M 29084 1 0 LCE6A,SMCP esv2761937 1 151077807 151120384 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7001499 M 1109 1 0 LCE6A,SMCP SW_0008 nsv831592 1 151081678 151263786 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450651 M 95 1 0 IVL,LCE6A,SMCP,SPRR1A,SPRR3,SPRR4 esv3305444 1 151089672 151089673 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7763810,essv7768741,essv7769304 M 185 3 0 "" NA19143,NA19239,NA19240 esv3308326 1 151089677 151089678 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843206,essv7841977 M 185 2 0 "" NA19239,NA19240 esv3394934 1 151089683 151089687 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673772,essv8673771 M 185 2 0 "" NA19239,NA19240 esv7910 1 151119922 151120129 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30351 M 1 0 0 SMCP nsv998873 1 151135751 151241882 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499545 M 29084 1 0 IVL,SPRR1A,SPRR3,SPRR4 esv29281 1 151150299 151151192 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20251 M 40 0 1 IVL NA18523 dgv217e59 1 151202952 151203250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3381824,esv3326531,esv3392662,esv3365746 M 185 4 0 "" NA12878,NA12891,NA19238,NA19239 nsv508038 1 151223112 151229112 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621479,nssv622296,nssv618509 M 4 0 0 SPRR1A CHM,NA10860,NA15510 nsv946394 1 151284329 151296014 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797726,nssv1797764,nssv1797713,nssv1797785,nssv1797796,nssv1797769,nssv1797793,nssv1797778,nssv1797715,nssv1797770,nssv1797717,nssv1797748,nssv1797729,nssv1797746,nssv1797741,nssv1797774,nssv1797718,nssv1797801,nssv1797789,nssv1797735,nssv1797794,nssv1797786,nssv1797721,nssv1797803,nssv1797720,nssv1797784,nssv1797731,nssv1797712,nssv1797791,nssv1797739,nssv1797733,nssv1797776,nssv1797722,nssv1797763,nssv1797743,nssv1797745,nssv1797724,nssv1797755,nssv1797792,nssv1797804,nssv1797714,nssv1797805,nssv1797719,nssv1797787,nssv1797795,nssv1797772,nssv1797730,nssv1797779,nssv1797716,nssv1797766,nssv1797798,nssv1797777,nssv1797737,nssv1797800,nssv1797725,nssv1797738,nssv1797728,nssv1797760,nssv1797740,nssv1797753,nssv1797732,nssv1797807,nssv1797734,nssv1797749,nssv1797790,nssv1797802,nssv1797797,nssv1797788,nssv1797736,nssv1797750,nssv1797723,nssv1797761,nssv1797727,nssv1797751,nssv1797754,nssv1797744,nssv1797775,nssv1797747,nssv1797808,nssv1797756,nssv1797781,nssv1797752,nssv1797759,nssv1797767,nssv1797742,nssv1797771,nssv1797768,nssv1797783,nssv1797806,nssv1797773,nssv1797758,nssv1797762,nssv1797780,nssv1797765,nssv1797782,nssv1797799,nssv1797757 M 97 10 0 SPRR2A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv464017 1 151300030 151365969 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540020 M 1557 0 1 SPRR2B,SPRR2E,SPRR2F 1780854279_A nsv547920 1 151300030 151365969 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173203 M 17421 0 1 SPRR2B,SPRR2E,SPRR2F 1780854279_A esv2523588 1 151302842 151304385 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5327283 M 1 0 1 "" NA18507 nsv946395 1 151309054 151336582 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797816,nssv1797870,nssv1797826,nssv1797839,nssv1797890,nssv1797905,nssv1797812,nssv1797879,nssv1797814,nssv1797857,nssv1797823,nssv1797867,nssv1797891,nssv1797854,nssv1797811,nssv1797855,nssv1797886,nssv1797904,nssv1797815,nssv1797850,nssv1797888,nssv1797896,nssv1797817,nssv1797874,nssv1797821,nssv1797862,nssv1797820,nssv1797875,nssv1797828,nssv1797859,nssv1797830,nssv1797880,nssv1797819,nssv1797878,nssv1797889,nssv1797900,nssv1797827,nssv1797898,nssv1797813,nssv1797903,nssv1797895,nssv1797847,nssv1797892,nssv1797844,nssv1797893,nssv1797845,nssv1797838,nssv1797842,nssv1797818,nssv1797883,nssv1797822,nssv1797881,nssv1797840,nssv1797843,nssv1797894,nssv1797869,nssv1797829,nssv1797861,nssv1797825,nssv1797860,nssv1797824,nssv1797809,nssv1797831,nssv1797884,nssv1797810,nssv1797871,nssv1797834,nssv1797901,nssv1797833,nssv1797836,nssv1797837,nssv1797876,nssv1797887,nssv1797897,nssv1797863,nssv1797877,nssv1797868,nssv1797852,nssv1797835,nssv1797882,nssv1797885,nssv1797841,nssv1797832,nssv1797866,nssv1797899,nssv1797873,nssv1797848,nssv1797865,nssv1797846,nssv1797858,nssv1797872,nssv1797853,nssv1797851,nssv1797864,nssv1797902,nssv1797849,nssv1797856 M 97 10 0 SPRR2B,SPRR2E HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv22397 1 151335819 151354587 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18497 M 40 1 0 SPRR2F NA19190 nsv946396 1 151338443 151354962 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1797935,nssv1798615,nssv1797923,nssv1798614,nssv1797911,nssv1797943,nssv1797909,nssv1798594,nssv1797920,nssv1798616,nssv1798600,nssv1798570,nssv1798599,nssv1798574,nssv1798607,nssv1797947,nssv1797908,nssv1798582,nssv1797927,nssv1798617,nssv1797914,nssv1798579,nssv1797915,nssv1798583,nssv1797925,nssv1798610,nssv1797917,nssv1798565,nssv1798605,nssv1797939,nssv1798602,nssv1798576,nssv1797916,nssv1797942,nssv1797910,nssv1797946,nssv1797924,nssv1797936,nssv1797934,nssv1798593,nssv1798608,nssv1797941,nssv1797918,nssv1798609,nssv1797907,nssv1797944,nssv1797937,nssv1798577,nssv1797921,nssv1797906,nssv1797913,nssv1797940,nssv1798604,nssv1798580,nssv1797919,nssv1797933,nssv1797926,nssv1798585,nssv1797922,nssv1798586,nssv1798603,nssv1798596,nssv1798606,nssv1798571,nssv1797928,nssv1798588,nssv1797930,nssv1797932,nssv1798601,nssv1798612,nssv1797931,nssv1798584,nssv1797912,nssv1798569,nssv1797929,nssv1798566,nssv1798613,nssv1798590,nssv1798597,nssv1798592,nssv1798564,nssv1798589,nssv1798587,nssv1797938,nssv1798581,nssv1798575,nssv1798618,nssv1798591,nssv1798567,nssv1798578,nssv1798572,nssv1798611,nssv1797945,nssv1798595,nssv1798568,nssv1798573,nssv1798598 M 97 10 0 SPRR2F HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1004168 1 151354833 151492657 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487712 M 29084 0 1 LELP1,PRR9,SPRR2C,SPRR2G nsv946397 1 151371841 151379790 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798650,nssv1798681,nssv1798636,nssv1798646,nssv1798624,nssv1798662,nssv1798700,nssv1798672,nssv1798648,nssv1798715,nssv1798641,nssv1798652,nssv1798696,nssv1798688,nssv1798704,nssv1798664,nssv1798639,nssv1798651,nssv1798631,nssv1798670,nssv1798627,nssv1798665,nssv1798633,nssv1798619,nssv1798638,nssv1798691,nssv1798697,nssv1798671,nssv1798640,nssv1798684,nssv1798621,nssv1798713,nssv1798637,nssv1798679,nssv1798620,nssv1798667,nssv1798699,nssv1798711,nssv1798623,nssv1798657,nssv1798705,nssv1798707,nssv1798626,nssv1798712,nssv1798634,nssv1798656,nssv1798702,nssv1798714,nssv1798698,nssv1798655,nssv1798644,nssv1798677,nssv1798630,nssv1798642,nssv1798625,nssv1798674,nssv1798701,nssv1798690,nssv1798629,nssv1798645,nssv1798628,nssv1798673,nssv1798635,nssv1798680,nssv1798647,nssv1798654,nssv1798632,nssv1798653,nssv1798643,nssv1798710,nssv1798703,nssv1798692,nssv1798622,nssv1798658,nssv1798706,nssv1798683,nssv1798682,nssv1798685,nssv1798709,nssv1798668,nssv1798666,nssv1798676,nssv1798659,nssv1798694,nssv1798687,nssv1798695,nssv1798678,nssv1798693,nssv1798686,nssv1798663,nssv1798649,nssv1798689,nssv1798661,nssv1798669,nssv1798660,nssv1798675,nssv1798708 M 97 10 0 SPRR2C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv2921 1 151377548 151402958 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4685 M 9 1 0 SPRR2C,SPRR2G NA19129 esv1301777 1 151400332 151400589 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4062924 M 2 0 1 "" HuRef esv27045 1 151401490 151402724 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10507 M 40 0 2 "" NA12287,NA19147 nsv2932 1 151412065 151445637 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3410 M 9 1 0 LELP1 NA12878 nsv998032 1 151477394 151530755 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498601 M 29084 1 0 LOR esv2620109 1 151481990 151483818 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5205911 M 1 0 1 "" NA18507 esv23954 1 151482194 151484329 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12935,esv14097 M 40 3 0 "" NA06985,NA12044,NA19108 dgv579n54 1 151482285 151484204 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547921,nsv547924,nsv547925 M 17421 3 0 "" dgv580n54 1 151482490 151483629 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547923,nsv547922 M 17421 4 0 "" dgv581n54 1 151482603 151484055 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547927,nsv547926 M 17421 0 2 "" esv1759689 1 151482682 151483058 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3666004 M 2 0 1 "" HuRef esv3302853 1 151484014 151485011 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7739066,essv7735351,essv7734892,essv7735455 M 185 4 0 "" NA18502,NA18956,NA19099,NA19225 esv3450708 1 151489552 151490250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691989 M 185 1 0 "" NA19240 esv1530810 1 151495867 151495867 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3749303 M 2 1 0 "" HuRef nsv999024 1 151521629 151592309 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499770 M 29084 0 1 PGLYRP3,PGLYRP4 esv6733 1 151551932 151588145 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29174 M 1 0 0 PGLYRP4 nsv525937 1 151565998 151573391 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702143 M 2026 1 0 PGLYRP4 nsv7184 1 151569690 151607803 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10269 M 9 0 0 PGLYRP4,S100A9 NA18956 nsv1002705 1 151574476 151792213 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484737 M 29084 1 0 PGLYRP4,S100A12,S100A3,S100A4,S100A5,S100A6,S100A7,S100A7A,S100A7L2,S100A8,S100A9 nsv946398 1 151644318 151656974 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798728,nssv1798751,nssv1798733,nssv1799113,nssv1798735,nssv1798755,nssv1798725,nssv1799114,nssv1798721,nssv1799098,nssv1798736,nssv1798772,nssv1799104,nssv1798769,nssv1799107,nssv1798761,nssv1798731,nssv1799086,nssv1799102,nssv1798716,nssv1799101,nssv1798766,nssv1798738,nssv1799094,nssv1799100,nssv1798762,nssv1798724,nssv1798749,nssv1799108,nssv1799087,nssv1798737,nssv1798767,nssv1798730,nssv1799090,nssv1798718,nssv1798743,nssv1798717,nssv1799112,nssv1798734,nssv1799096,nssv1798727,nssv1799119,nssv1798720,nssv1799116,nssv1799109,nssv1798764,nssv1798719,nssv1799092,nssv1798732,nssv1799091,nssv1798741,nssv1798753,nssv1798747,nssv1799093,nssv1798722,nssv1798770,nssv1799103,nssv1798771,nssv1799106,nssv1799088,nssv1798723,nssv1799111,nssv1798745,nssv1799082,nssv1799105,nssv1798768,nssv1798726,nssv1799085,nssv1798744,nssv1798756,nssv1798740,nssv1798746,nssv1798729,nssv1798742,nssv1798739,nssv1798757,nssv1798748,nssv1799095,nssv1799083,nssv1798759,nssv1798754,nssv1799081,nssv1798752,nssv1799099,nssv1799117,nssv1798750,nssv1798765,nssv1798760,nssv1798773,nssv1799118,nssv1798763,nssv1799115,nssv1799110,nssv1799089,nssv1799084,nssv1799097,nssv1798758 M 97 10 0 S100A7A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831603 1 151672466 151842767 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450662 M 95 1 0 S100A2,S100A3,S100A4,S100A5,S100A6,S100A7,S100A7L2 esv33204 1 151677134 151685619 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99764 M 51 1 0 S100A7L2 22086 nsv946399 1 151698462 151704967 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799814,nssv1799174,nssv1799137,nssv1799824,nssv1799135,nssv1799812,nssv1799821,nssv1799826,nssv1799131,nssv1799160,nssv1799139,nssv1799155,nssv1799133,nssv1799807,nssv1799145,nssv1799806,nssv1799142,nssv1799154,nssv1799148,nssv1799800,nssv1799129,nssv1799804,nssv1799813,nssv1799799,nssv1799128,nssv1799825,nssv1799820,nssv1799798,nssv1799134,nssv1799823,nssv1799819,nssv1799802,nssv1799141,nssv1799805,nssv1799149,nssv1799158,nssv1799138,nssv1799169,nssv1799822,nssv1799163,nssv1799816,nssv1799153,nssv1799132,nssv1799150,nssv1799124,nssv1799120,nssv1799121,nssv1799810,nssv1799815,nssv1799147,nssv1799122,nssv1799164,nssv1799151,nssv1799166,nssv1799127,nssv1799176,nssv1799126,nssv1799801,nssv1799140,nssv1799177,nssv1799817,nssv1799796,nssv1799130,nssv1799167,nssv1799136,nssv1799146,nssv1799123,nssv1799828,nssv1799125,nssv1799829,nssv1799818,nssv1799156,nssv1799144,nssv1799173,nssv1799811,nssv1799179,nssv1799162,nssv1799175,nssv1799159,nssv1799830,nssv1799171,nssv1799803,nssv1799165,nssv1799161,nssv1799827,nssv1799831,nssv1799797,nssv1799832,nssv1799168,nssv1799152,nssv1799809,nssv1799178,nssv1799170,nssv1799157,nssv1799172,nssv1799143,nssv1799808 M 97 10 0 S100A7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv582n54 1 151878757 151989661 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547929,nsv547928 M 17421 2 0 CHTOP,ILF2,INTS3,MIR8083,NPR1,SNAPIN 1780862424_A nsv464028 1 151888844 151989661 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540027 M 1557 1 0 ILF2,INTS3,MIR8083,NPR1,SNAPIN 1780862424_A nsv476355 1 151905771 151905771 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013410 M 9 1 0 ILF2 NA12878 nsv474391 1 151937344 151937344 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014548 M 9 1 0 "" NA18956 esv23717 1 151938268 151961933 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16517 M 40 6 0 "" NA06985,NA11995,NA18517,NA18861,NA18916,NA19129 nsv1002328 1 151938655 151985370 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501322 M 29084 1 0 INTS3 dgv583n54 1 151938871 151959956 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547930,nsv547932,nsv547933,nsv547931,nsv547935,nsv547934,nsv547936,nsv547937 M 17421 16 0 "" esv3303066 1 151939841 151960489 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7738053,essv7737923,essv7734348,essv7736299 M 185 4 0 "" NA07000,NA11894,NA12156,NA18861 esv2762193 1 151940298 151959872 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006493 M 1109 1 0 "" RW_0139 nsv441716 1 151940298 151959872 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656773,nssv1656788,nssv1656786,nssv1656774,nssv1656775,nssv1656781,nssv1656783,nssv1656789,nssv1656782,nssv1656785,nssv1656780,nssv1656772,nssv1656777,nssv1656778,nssv1656771,nssv1656787,nssv1656776,nssv1656779,nssv1656784 M 270 19 0 "" NA07022,NA07048,NA11994,NA11995,NA12156,NA12248,NA12802,NA12814,NA18516,NA18517,NA19127,NA19128,NA19129,NA19137,NA19171,NA19203,NA19207,NA19208,NA19209 nsv514010 1 151941264 151957328 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2849050,nssv2849049,nssv2849065,nssv2849061,nssv2849085,nssv2849081,nssv2849092,nssv2849032,nssv2849053,nssv2849056,nssv2849078,nssv2849042,nssv2849075,nssv2849097,nssv2849102,nssv2849040,nssv2849074,nssv2849066,nssv2849087,nssv2849062,nssv2849058,nssv2849068,nssv2849072,nssv2849104,nssv2849064,nssv2849047,nssv2849051,nssv2849080,nssv2849096,nssv2849063,nssv2849082,nssv2849069,nssv2849070,nssv2849048,nssv2849094,nssv2849034,nssv2849093,nssv2849035,nssv2849044,nssv2849045,nssv2849073,nssv2849088,nssv2849052,nssv2849100,nssv2849041,nssv2849046,nssv2849055,nssv2849084,nssv2849038,nssv2849079,nssv2849090,nssv2849071,nssv2849054,nssv2849060,nssv2849083,nssv2849103,nssv2849105,nssv2849033,nssv2849037,nssv2849043,nssv2849059,nssv2849067,nssv2849101,nssv2849098,nssv2849095,nssv2849099,nssv2849039,nssv2849086,nssv2849077,nssv2849089,nssv2849091,nssv2849057,nssv2849036,nssv2849076 M 2366 74 0 "" NA06985,NA07000,NA07022,NA07031,NA07034,NA07037,NA07048,NA07347,NA10864,NA11892,NA11894,NA11994,NA11995,NA12056,NA12156,NA12248,NA12717,NA12802,NA12817,NA12827,NA12889,NA12890,NA18516,NA18517,NA18562,NA18856,NA18861,NA18863,NA18874,NA18875,NA18916,NA18930,NA18933,NA19121,NA19123,NA19127,NA19128,NA19129,NA19137,NA19171,NA19182,NA19183,NA19197,NA19199,NA19207,NA19208,NA19209,NA19236,NA21303,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21387,NA21389,NA21391,NA21400,NA21440,NA21453,NA21454,NA21455,NA21479,NA21480,NA21485,NA21486,NA21524,NA21600,NA21601,NA21608,NA21615,NA21716,NA21717 nsv547938 1 151952685 151958997 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724859 M 17421 1 0 "" nsv2943 1 151954284 151960688 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4696 M 9 1 0 "" NA19129 nsv547939 1 151956637 151963289 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724860 M 17421 1 0 "" nsv547940 1 151956880 151959956 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724861 M 17421 1 0 "" nsv547941 1 151975530 152067722 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724862 M 17421 0 1 GATAD2B,INTS3,SLC27A3 nsv515962 1 152018763 152040053 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv665486,nssv670770,nssv690230,nssv654683,nssv661377,nssv655021,nssv661817,nssv692910,nssv689445,nssv661360,nssv700310,nssv686798,nssv660164 M 2026 0 13 SLC27A3 nsv476590 1 152093675 152093675 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015993 M 9 1 0 GATAD2B NA12878 nsv946401 1 152230461 152232053 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799862,nssv1799891,nssv1799867,nssv1799903,nssv1799857,nssv1799886,nssv1799932,nssv1799914,nssv1799869,nssv1799921,nssv1799866,nssv1799908,nssv1799855,nssv1799897,nssv1799931,nssv1799919,nssv1799879,nssv1799918,nssv1799928,nssv1799940,nssv1799872,nssv1799938,nssv1799927,nssv1799901,nssv1799853,nssv1799922,nssv1799856,nssv1799920,nssv1799870,nssv1799905,nssv1799858,nssv1799926,nssv1799934,nssv1799913,nssv1799881,nssv1799894,nssv1799861,nssv1799885,nssv1799863,nssv1799880,nssv1799929,nssv1799850,nssv1799935,nssv1799906,nssv1799868,nssv1799939,nssv1799878,nssv1799910,nssv1799930,nssv1799907,nssv1799865,nssv1799892,nssv1799871,nssv1799884,nssv1799854,nssv1799916,nssv1799933,nssv1799900,nssv1799864,nssv1799889,nssv1799936,nssv1799895,nssv1799860,nssv1799877,nssv1799859,nssv1799912,nssv1799874,nssv1799876,nssv1799875,nssv1799909,nssv1799851,nssv1799888,nssv1799852,nssv1799937,nssv1799882,nssv1799941,nssv1799873,nssv1799893,nssv1799942,nssv1799902,nssv1799887,nssv1799925,nssv1799924,nssv1799944,nssv1799917,nssv1799898,nssv1799915,nssv1799946,nssv1799943,nssv1799896,nssv1799923,nssv1799890,nssv1799945,nssv1799883,nssv1799904,nssv1799899,nssv1799911 M 97 10 0 NUP210L,RPS27 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv520398 1 152334820 152408532 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv663691,nssv706092,nssv676401 M 2026 2 1 NUP210L,TPM3 nsv1000153 1 152340873 152419041 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482998 M 29084 1 0 NUP210L,TPM3 esv2586978 1 152347103 152352171 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5305380 M 1 0 1 NUP210L NA18507 esv2063006 1 152347385 152351482 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4690201 M 1 0 1 NUP210L NA18507 esv2648729 1 152348653 152353542 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5336500 M 1 0 1 NUP210L NA18507 esv3383476 1 152390373 152390392 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596434 M 185 1 0 NUP210L NA19143 esv3310079 1 152390382 152390383 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837306,essv7837120 M 185 2 0 NUP210L NA19239,NA19240 esv3417021 1 152390383 152390394 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673773,essv8673774 M 185 2 0 NUP210L NA19238,NA19240 nsv946404 1 152394747 152396936 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799980,nssv1799964,nssv1800006,nssv1799953,nssv1799989,nssv1800032,nssv1800009,nssv1799954,nssv1799993,nssv1799966,nssv1799996,nssv1799963,nssv1800001,nssv1800028,nssv1799983,nssv1799952,nssv1800002,nssv1799949,nssv1799994,nssv1799978,nssv1800040,nssv1800024,nssv1800035,nssv1799957,nssv1799947,nssv1799967,nssv1800017,nssv1799959,nssv1799990,nssv1799969,nssv1800005,nssv1799955,nssv1800036,nssv1799962,nssv1799982,nssv1799975,nssv1799977,nssv1800031,nssv1800019,nssv1799960,nssv1800023,nssv1799965,nssv1799991,nssv1800027,nssv1800013,nssv1799968,nssv1799998,nssv1799951,nssv1800037,nssv1799956,nssv1800000,nssv1799950,nssv1800011,nssv1800030,nssv1799974,nssv1800033,nssv1800010,nssv1800029,nssv1800034,nssv1799961,nssv1800015,nssv1799972,nssv1799997,nssv1800025,nssv1799973,nssv1799976,nssv1799992,nssv1799971,nssv1799988,nssv1800026,nssv1799987,nssv1799958,nssv1800018,nssv1799948,nssv1800012,nssv1800003,nssv1799979,nssv1800016,nssv1799999,nssv1800014,nssv1800004,nssv1800039,nssv1799985,nssv1800007,nssv1799981,nssv1799986,nssv1800021,nssv1800041,nssv1800022,nssv1800008,nssv1799970,nssv1800038,nssv1799995,nssv1800043,nssv1800020,nssv1799984,nssv1800042 M 97 10 0 TPM3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv29020 1 152424866 152427926 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12863 M 40 0 4 TPM3 NA18502,NA18523,NA18907,NA19099 nsv2954 1 152434336 152469445 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1572 M 9 1 0 C1orf189,C1orf43,UBAP2L NA19240 nsv521887 1 152503194 152950730 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694658 M 2026 1 0 ADAR,AQP10,ATP8B2,CHRNB2,HAX1,IL6R,KCNN3,SHE,TDRD10,UBAP2L,UBE2Q1 nsv946406 1 152550861 152561362 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1801061,nssv1801031,nssv1800070,nssv1801056,nssv1800083,nssv1801069,nssv1800075,nssv1801043,nssv1800068,nssv1800085,nssv1801065,nssv1800088,nssv1800077,nssv1801071,nssv1800087,nssv1800096,nssv1800065,nssv1801078,nssv1800063,nssv1800098,nssv1800074,nssv1800091,nssv1800060,nssv1800095,nssv1801063,nssv1801074,nssv1801067,nssv1801075,nssv1801059,nssv1800058,nssv1800066,nssv1801049,nssv1800086,nssv1801077,nssv1800080,nssv1800101,nssv1800073,nssv1801076,nssv1800071,nssv1800094,nssv1801064,nssv1801036,nssv1800076,nssv1801033,nssv1800079,nssv1801047,nssv1800078,nssv1801044,nssv1801062,nssv1801045,nssv1800062,nssv1801073,nssv1801066,nssv1801057,nssv1800064,nssv1800093,nssv1801068,nssv1800102,nssv1800072,nssv1800084,nssv1800089,nssv1801054,nssv1800067,nssv1800099,nssv1800059,nssv1801028,nssv1801060,nssv1801035,nssv1800069,nssv1800097,nssv1800082,nssv1801032,nssv1800061,nssv1800092,nssv1801046,nssv1800100,nssv1801040,nssv1800103,nssv1801055,nssv1801029,nssv1801050,nssv1801072,nssv1801037,nssv1800090,nssv1801034,nssv1801053,nssv1801070,nssv1800081,nssv1801051,nssv1801038,nssv1801052,nssv1801041,nssv1801042,nssv1801048,nssv1801058,nssv1801039,nssv1801030 M 97 10 0 AQP10 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv523934 1 152562700 152574254 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699780 M 2026 0 1 AQP10,ATP8B2 nsv946407 1 152602257 152618336 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798490,nssv1801127,nssv1801091,nssv1798503,nssv1801096,nssv1801131,nssv1801107,nssv1801136,nssv1801080,nssv1798504,nssv1801085,nssv1798475,nssv1801094,nssv1798501,nssv1798486,nssv1801105,nssv1801090,nssv1798480,nssv1801084,nssv1801139,nssv1801098,nssv1801109,nssv1801110,nssv1798497,nssv1801089,nssv1801106,nssv1798491,nssv1801128,nssv1798489,nssv1801111,nssv1801095,nssv1798470,nssv1801087,nssv1801133,nssv1801083,nssv1798472,nssv1798495,nssv1801118,nssv1801097,nssv1798496,nssv1801088,nssv1798473,nssv1801099,nssv1801116,nssv1798494,nssv1801123,nssv1798488,nssv1801137,nssv1798492,nssv1798499,nssv1801100,nssv1801119,nssv1798487,nssv1801122,nssv1801082,nssv1801130,nssv1801086,nssv1801114,nssv1801101,nssv1801115,nssv1798493,nssv1798476,nssv1801104,nssv1801102,nssv1801081,nssv1798477,nssv1801108,nssv1801112,nssv1801092,nssv1801132,nssv1801103,nssv1798484,nssv1801093,nssv1798479,nssv1798500,nssv1798483,nssv1801125,nssv1798502,nssv1801079,nssv1801138,nssv1798498,nssv1798481,nssv1798471,nssv1798474,nssv1801134,nssv1801113,nssv1801117,nssv1801120,nssv1801124,nssv1801121,nssv1798482,nssv1801129,nssv1801135,nssv1798478,nssv1798485,nssv1801126,nssv1798505 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1713770 1 152619054 152619133 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3717441 M 2 0 1 "" HuRef nsv547942 1 152740755 152741408 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724865,nssv724864,nssv724863 M 17421 1 2 SHE,TDRD10 dgv584n54 1 152740755 152741661 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547951,nsv547956,nsv547948,nsv547947,nsv547949,nsv547955,nsv547952,nsv547946,nsv547945,nsv547943,nsv547944 M 17421 34 0 SHE,TDRD10 esv23279 1 152740772 152741717 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19920 M 40 0 1 SHE,TDRD10 NA12489 dgv585n54 1 152740857 152747109 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547950,nsv547953 M 17421 2 0 SHE,TDRD10 nsv547954 1 152740909 152741601 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724899,nssv724898 M 17421 0 2 SHE,TDRD10 nsv547957 1 152741154 152741661 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724904 M 17421 0 1 TDRD10 nsv506960 1 152770007 152776007 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617541 M 4 0 0 TDRD10 CHM nsv160554 1 152777660 152779607 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179132 M 24 TDRD10 nsv472265 1 152834515 152834515 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016246 M 9 1 0 ADAR NA18555 nsv470740 1 152835307 153063519 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547780 M 443 1 0 ADAR,KCNN3 HGDP01370 nsv464050 1 152835307 153067871 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540042 M 1557 1 0 ADAR,KCNN3 HGDP01370 nsv547958 1 152835307 153067871 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173205 M 17421 1 0 ADAR,KCNN3 HGDP01370 esv32568 1 152855287 152857235 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv99140,essv99372 M 51 0 2 ADAR 22275,22335 esv33703 1 152859979 152860554 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv99928 M 51 0 1 ADAR 22086 esv33112 1 152862476 152863431 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv98223,essv100710 M 51 2 0 ADAR 21656,21772 nsv464062 1 152897122 152935918 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540051 M 1557 1 0 "" HGDP00637 nsv547959 1 152897122 152935918 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173206 M 17421 1 0 "" HGDP00637 nsv522177 1 152928827 152935918 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694950 M 2026 0 1 "" nsv509491 1 152931739 152958409 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623795 M 4 1 0 KCNN3 NA18994 esv3435288 1 152953061 152953864 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652044 M 185 1 0 KCNN3 NA19240 esv3354801 1 152953288 152953356 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740925 M 185 1 0 KCNN3 NA12878 esv2574257 1 152968190 152968198 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5305246 M 1 1 0 KCNN3 NA18507 esv1554680 1 152994603 152994603 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3820773 M 2 1 0 KCNN3 HuRef esv3362664 1 153012752 153014050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691990 M 185 1 0 KCNN3 NA19239 nsv472399 1 153023041 153023041 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017454 M 9 1 0 KCNN3 NA18555 esv275470 1 153027219 153027733 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585581,essv2585231 M 1250 1 1 KCNN3 esv29982 1 153084977 153149168 CNV gain Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv84221 M 2 1 0 KCNN3 HuRef nsv2966 1 153099220 153132221 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7076 M 9 1 0 KCNN3 NA12156 nsv464073 1 153104420 153171464 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540061 M 1557 0 1 KCNN3,PMVK HGDP00857 nsv547960 1 153104420 153171464 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173207 M 17421 0 1 KCNN3,PMVK HGDP00857 nsv509502 1 153143507 153381391 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619815,nssv623798,nssv623796 M 4 2 0 ADAM15,CKS1B,DCST1,DCST2,DPM3,EFNA1,EFNA3,EFNA4,FLAD1,LENEP,LOC100505666,MIR4258,PBXIP1,PMVK,PYGO2,SHC1,SLC50A1,ZBTB7B NA10860,NA18994 nsv2977 1 153147677 153174237 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7688 M 9 0 1 PMVK NA12156 nsv946408 1 153202521 153203123 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798518,nssv1799492,nssv1798523,nssv1799517,nssv1798511,nssv1798558,nssv1798528,nssv1799523,nssv1799511,nssv1799499,nssv1799512,nssv1799496,nssv1798525,nssv1798554,nssv1799507,nssv1799502,nssv1798515,nssv1799524,nssv1799513,nssv1799490,nssv1798517,nssv1799491,nssv1798520,nssv1799522,nssv1799514,nssv1798533,nssv1799509,nssv1798561,nssv1798535,nssv1799504,nssv1798507,nssv1799506,nssv1798527,nssv1798560,nssv1798510,nssv1798540,nssv1799508,nssv1798541,nssv1798516,nssv1799497,nssv1798524,nssv1798555,nssv1798537,nssv1798542,nssv1799510,nssv1798549,nssv1798514,nssv1799525,nssv1798512,nssv1798532,nssv1799516,nssv1798538,nssv1798531,nssv1799505,nssv1799515,nssv1798563,nssv1798519,nssv1799521,nssv1798526,nssv1798529,nssv1798534,nssv1798546,nssv1798509,nssv1799488,nssv1798521,nssv1798506,nssv1798530,nssv1799495,nssv1798522,nssv1799519,nssv1798513,nssv1798543,nssv1798508,nssv1798544,nssv1799526,nssv1799503,nssv1799501,nssv1798545,nssv1799520,nssv1799494,nssv1798553,nssv1798550,nssv1799493,nssv1798547,nssv1798548,nssv1799518,nssv1799498,nssv1798551,nssv1798559,nssv1798562,nssv1798556,nssv1799500,nssv1799489,nssv1798552,nssv1798539,nssv1798557,nssv1798536 M 97 10 0 SHC1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946409 1 153217766 153218357 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799540,nssv1799580,nssv1799545,nssv1799584,nssv1799542,nssv1799566,nssv1799544,nssv1799572,nssv1799534,nssv1799589,nssv1799558,nssv1799596,nssv1799543,nssv1799559,nssv1799533,nssv1799620,nssv1799546,nssv1799593,nssv1799532,nssv1799553,nssv1799556,nssv1799554,nssv1799539,nssv1799587,nssv1799555,nssv1799579,nssv1799608,nssv1799619,nssv1799612,nssv1799621,nssv1799530,nssv1799601,nssv1799605,nssv1799597,nssv1799609,nssv1799575,nssv1799549,nssv1799622,nssv1799604,nssv1799585,nssv1799611,nssv1799564,nssv1799535,nssv1799618,nssv1799537,nssv1799602,nssv1799610,nssv1799567,nssv1799607,nssv1799588,nssv1799548,nssv1799550,nssv1799547,nssv1799581,nssv1799552,nssv1799562,nssv1799531,nssv1799577,nssv1799606,nssv1799614,nssv1799541,nssv1799594,nssv1799613,nssv1799623,nssv1799528,nssv1799565,nssv1799536,nssv1799570,nssv1799529,nssv1799600,nssv1799538,nssv1799576,nssv1799551,nssv1799560,nssv1799563,nssv1799573,nssv1799568,nssv1799617,nssv1799557,nssv1799592,nssv1799598,nssv1799591,nssv1799590,nssv1799615,nssv1799603,nssv1799574,nssv1799599,nssv1799578,nssv1799571,nssv1799595,nssv1799561,nssv1799616,nssv1799586,nssv1799582,nssv1799583,nssv1799527,nssv1799569 M 97 10 0 CKS1B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv824775 1 153256498 153256958 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431844 M 31 0 1 ZBTB7B AK20 nsv524157 1 153293566 153297181 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700036 M 2026 0 1 ADAM15,LOC100505666 esv2762194 1 153329769 153333907 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006494 M 1109 0 1 "" RW_0195 nsv998756 1 153346714 153403169 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499393 M 29084 1 0 DPM3,EFNA1,SLC50A1 nsv464084 1 153348922 153461604 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540072 M 1557 0 1 DPM3,EFNA1,GBAP1,KRTCAP2,MIR92B,MTX1,MUC1,SLC50A1,THBS3,TRIM46 1798860443_A nsv547961 1 153348922 153461604 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173208 M 17421 0 1 DPM3,EFNA1,GBAP1,KRTCAP2,MIR92B,MTX1,MUC1,SLC50A1,THBS3,TRIM46 1798860443_A dgv3n68 1 153361602 153580033 CNV loss Wong_et_al_2007 17160897 BAC aCGH nsv831625,nsv831614 M 95 0 8 ASH1L,CLK2,DPM3,EFNA1,FAM189B,FDPS,GBA,GBAP1,HCN3,KRTCAP2,MIR92B,MTX1,MUC1,PKLR,RUSC1,RUSC1-AS1,SCAMP3,SLC50A1,THBS3,TRIM46 esv2758971 1 153361602 153581431 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757756 M 270 5 0 ASH1L,CLK2,DPM3,EFNA1,FAM189B,FDPS,GBA,GBAP1,HCN3,KRTCAP2,MIR92B,MTX1,MUC1,PKLR,RUSC1,RUSC1-AS1,SCAMP3,SLC50A1,THBS3,TRIM46 NA19128,NA19129,NA19130,NA19171,NA19173 nsv470741 1 153381884 153496755 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547781 M 443 0 1 FAM189B,GBA,GBAP1,KRTCAP2,MIR92B,MTX1,MUC1,SCAMP3,THBS3,TRIM46 HGDP01412 nsv946410 1 153385663 153401942 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799709,nssv1799668,nssv1799640,nssv1799666,nssv1799643,nssv1799662,nssv1799629,nssv1799677,nssv1799639,nssv1799651,nssv1799627,nssv1799689,nssv1799705,nssv1799711,nssv1799626,nssv1799665,nssv1799630,nssv1799675,nssv1799641,nssv1799686,nssv1799636,nssv1799681,nssv1799646,nssv1799674,nssv1799655,nssv1799658,nssv1799701,nssv1799663,nssv1799637,nssv1799693,nssv1799708,nssv1799680,nssv1799706,nssv1799690,nssv1799707,nssv1799650,nssv1799634,nssv1799717,nssv1799653,nssv1799669,nssv1799642,nssv1799661,nssv1799644,nssv1799684,nssv1799703,nssv1799656,nssv1799638,nssv1799672,nssv1799704,nssv1799698,nssv1799652,nssv1799716,nssv1799645,nssv1799676,nssv1799632,nssv1799699,nssv1799631,nssv1799647,nssv1799628,nssv1799660,nssv1799710,nssv1799664,nssv1799635,nssv1799682,nssv1799633,nssv1799685,nssv1799649,nssv1799700,nssv1799648,nssv1799713,nssv1799625,nssv1799715,nssv1799702,nssv1799691,nssv1799718,nssv1799719,nssv1799667,nssv1799720,nssv1799670,nssv1799678,nssv1799696,nssv1799697,nssv1799673,nssv1799657,nssv1799683,nssv1799659,nssv1799692,nssv1799695,nssv1799694,nssv1799671,nssv1799624,nssv1799688,nssv1799654,nssv1799712,nssv1799714,nssv1799687,nssv1799679 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1010146 1 153385720 153467688 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491862 M 29084 1 0 GBAP1,KRTCAP2,MIR92B,MTX1,MUC1,THBS3,TRIM46 nsv8447 1 153411253 153423561 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26574 M 31 1 0 KRTCAP2,TRIM46 NA19221 nsv527682 1 153416342 153464086 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704158 M 2026 1 0 GBAP1,MIR92B,MTX1,MUC1,THBS3,TRIM46 nsv2988 1 153421230 153456116 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4704,nssv1582 M 9 2 0 GBAP1,MIR92B,MTX1,MUC1,THBS3,TRIM46 NA19129,NA19240 nsv547962 1 153425038 153427565 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724905 M 17421 0 1 MUC1 esv1005636 1 153426611 153430007 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563924 M 3 1 0 MUC1 HuRef esv23811 1 153427195 153428306 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13162,esv20591 M 40 5 2 MUC1 NA12044,NA12414,NA12776,NA12878,NA15510,NA18505,NA18909 esv3331596 1 153427607 153428378 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652045 M 185 1 0 MUC1 NA19240 esv3381155 1 153427752 153428250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691991 M 185 1 0 MUC1 NA12878 esv2764209 1 153442281 153467688 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006537,essv7006526,essv7006508,essv7006527,essv7006517,essv7006497,essv7006505,essv7006512,essv7006507,essv7006513,essv7006519,essv7006518,essv7006503,essv7006540,essv7006516,essv7006495,essv7006509,essv7006528,essv7006532,essv7006535,essv7006498,essv7006506,essv7006539,essv7006515,essv7006536,essv7006530,essv7006541,essv7006501,essv7006538,essv7006525,essv7006531,essv7006510,essv7006499,essv7006521,essv7006520,essv7006514,essv7006504,essv7006496,essv7006502,essv7006529,essv7006524,essv7006533 M 1109 41 1 GBAP1,MTX1,THBS3 RW_0006,RW_0022,RW_0023,RW_0061,RW_0087,RW_0094,RW_0099,RW_0101,RW_0111,RW_0117,RW_0118,RW_0123,RW_0149,RW_0168,RW_0185,RW_0186,RW_0190,RW_0208,RW_0212,RW_0217,RW_0221,RW_0223,RW_0224,RW_0230,RW_0238,RW_0246,RW_0257,RW_0258,RW_0359,RW_0509,RW_0513,RW_0515,RW_0536,RW_0545,RW_0566,RW_0591,RW_0593,RW_0600,RW_0614,RW_0646,RW_0656,RW_0658 nsv547963 1 153445370 153472791 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724906 M 17421 0 1 GBA,GBAP1,MTX1 nsv8458 1 153446755 153451033 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25969 M 31 1 0 GBAP1,MTX1 NA19173 nsv946411 1 153446771 153455592 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799727,nssv1799762,nssv1799741,nssv1800739,nssv1799738,nssv1800737,nssv1799736,nssv1800738,nssv1799737,nssv1799747,nssv1800727,nssv1799765,nssv1799732,nssv1799785,nssv1800723,nssv1799780,nssv1799731,nssv1799786,nssv1800726,nssv1799772,nssv1799724,nssv1799791,nssv1799734,nssv1799721,nssv1800722,nssv1799760,nssv1799743,nssv1799763,nssv1799750,nssv1799789,nssv1799752,nssv1799783,nssv1799729,nssv1799787,nssv1800730,nssv1799766,nssv1799733,nssv1799771,nssv1799726,nssv1800736,nssv1799723,nssv1799774,nssv1799739,nssv1799759,nssv1799728,nssv1799773,nssv1799742,nssv1799755,nssv1800725,nssv1799778,nssv1799725,nssv1800741,nssv1799749,nssv1799777,nssv1800731,nssv1799748,nssv1799735,nssv1799790,nssv1799740,nssv1799753,nssv1800729,nssv1800734,nssv1800724,nssv1800720,nssv1800728,nssv1799781,nssv1799745,nssv1799795,nssv1799730,nssv1799779,nssv1799722,nssv1799784,nssv1799746,nssv1799758,nssv1799769,nssv1799768,nssv1799776,nssv1800735,nssv1800733,nssv1799744,nssv1799788,nssv1800721,nssv1799782,nssv1799761,nssv1799756,nssv1799751,nssv1799794,nssv1800732,nssv1799764,nssv1800740,nssv1799775,nssv1799767,nssv1799754,nssv1799770,nssv1799757,nssv1799792,nssv1799793 M 97 10 0 GBAP1,MTX1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv28935 1 153447113 153487867 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13606 M 40 2 0 FAM189B,GBA,GBAP1,MTX1 NA19129,NA19190 nsv8469 1 153450569 153471196 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26194 M 31 1 0 GBA,GBAP1 NA19173 nsv547964 1 153452575 153470634 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724907,nssv724908 M 17421 1 1 GBAP1 esv2421617 1 153452575 153472791 CNV duplication Altshuler_et_al_2010 20811451 SNP array essv5114581,essv5156016,essv5062905,essv5034857,essv5092327,essv5090643,essv5072179,essv5084444,essv5044586,essv5128072,essv5078186,essv5059193,essv5101165,essv5111214,essv5100941,essv5110237,essv5146336,essv5063267,essv5016282,essv5100134,essv5122155,essv5147657,essv5070801,essv5109448,essv5147282,essv5079338,essv5052990,essv5041397,essv5135407,essv5022166,essv5152699,essv5139809,essv5009170,essv5131995,essv5012914,essv5005883,essv5006204,essv5038333,essv5115026,essv5061169,essv5124849,essv5090880,essv5114495,essv5011822,essv5154422,essv5074777,essv5152306 M 1184 47 0 GBA,GBAP1 NA18510,NA18917,NA19031,NA19102,NA19103,NA19107,NA19109,NA19128,NA19129,NA19130,NA19171,NA19172,NA19173,NA19176,NA19190,NA19191,NA19215,NA19235,NA19313,NA19317,NA19318,NA19332,NA19334,NA19393,NA19428,NA19436,NA19679,NA19711,NA19714,NA19834,NA19909,NA19917,NA20348,NA20756,NA21295,NA21317,NA21333,NA21371,NA21475,NA21479,NA21489,NA21513,NA21517,NA21608,NA21615,NA21685,NA21768 nsv436038 1 153453996 153471173 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465852 M 2 1 0 GBA,GBAP1 NA15510 nsv514011 1 153455760 153463744 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2849114,nssv2849120,nssv2849116,nssv2849125,nssv2849111,nssv2849109,nssv2849112,nssv2849107,nssv2849123,nssv2849113,nssv2849118,nssv2849117,nssv2849106,nssv2849126,nssv2849124,nssv2849108,nssv2849115,nssv2849110,nssv2849119,nssv2849121,nssv2849122 M 2366 21 0 GBAP1 NA18510,NA18917,NA19102,NA19103,NA19107,NA19109,NA19128,NA19129,NA19130,NA19171,NA19172,NA19173,NA19191,NA19235,NA21316,NA21475,NA21479,NA21489,NA21513,NA21608,NA21615 nsv1008748 1 153455772 153497234 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502200 M 29084 0 1 FAM189B,GBA,GBAP1,SCAMP3 nsv1011773 1 153455772 153501445 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495363 M 29084 1 0 CLK2,FAM189B,GBA,GBAP1,SCAMP3 nsv441717 1 153455784 153467684 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656793,nssv1656796,nssv1656790,nssv1656792,nssv1656794,nssv1656795,nssv1656791,nssv1656798,nssv1656797 M 270 9 0 GBAP1 NA19102,NA19103,NA19129,NA19130,NA19159,NA19161,NA19171,NA19172,NA19173 esv2763713 1 153455784 153467688 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7001510,essv7001522 M 1109 1 1 GBAP1 SW_0031,SW_0062 nsv516159 1 153461604 153464086 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv671763,nssv666542 M 2026 2 0 GBAP1 nsv2999 1 153468579 153471710 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4714 M 9 1 0 GBA NA19129 nsv946412 1 153470920 153474585 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800759,nssv1798158,nssv1800770,nssv1798161,nssv1800827,nssv1800784,nssv1800743,nssv1800807,nssv1800744,nssv1800834,nssv1800824,nssv1800793,nssv1800749,nssv1800796,nssv1800747,nssv1800781,nssv1800761,nssv1800809,nssv1800751,nssv1800832,nssv1800823,nssv1800779,nssv1800767,nssv1800805,nssv1800773,nssv1800804,nssv1800820,nssv1800831,nssv1800819,nssv1800814,nssv1800753,nssv1800785,nssv1800758,nssv1800806,nssv1800750,nssv1800782,nssv1800752,nssv1800833,nssv1800760,nssv1800778,nssv1800748,nssv1800813,nssv1800822,nssv1800817,nssv1800763,nssv1800810,nssv1800746,nssv1800774,nssv1800828,nssv1800765,nssv1800762,nssv1800788,nssv1800755,nssv1800795,nssv1800764,nssv1800811,nssv1800826,nssv1800786,nssv1800757,nssv1800815,nssv1800754,nssv1800777,nssv1800745,nssv1800775,nssv1800825,nssv1798159,nssv1800756,nssv1798160,nssv1800771,nssv1800800,nssv1800766,nssv1800798,nssv1800821,nssv1800772,nssv1800792,nssv1800776,nssv1800783,nssv1800816,nssv1800802,nssv1800742,nssv1800812,nssv1800808,nssv1800830,nssv1800790,nssv1800794,nssv1800787,nssv1800818,nssv1800801,nssv1800797,nssv1800768,nssv1800799,nssv1800829,nssv1800769,nssv1800780,nssv1800791,nssv1800789,nssv1800803 M 97 10 0 GBA HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8480 1 153472959 153481160 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26400 M 31 1 0 GBA NA19173 nsv831636 1 153485847 153711488 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450762,nssv1450773 M 95 0 2 ASH1L,CLK2,FAM189B,FDPS,HCN3,MIR555,PKLR,POU5F1P4,RUSC1,RUSC1-AS1,SCAMP3 esv33869 1 153489907 154184585 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94598,essv101285,essv96490,essv96651,essv95989,essv94986,essv97197,essv94841,essv92675,essv98848,essv97832,essv94044,essv99966,essv95181,essv98404,essv95416,essv97450,essv99061,essv93009,essv98227,essv92843,essv93442,essv93312,essv97768,essv101627,essv100639,essv92508,essv100260,essv99159,essv95304,essv95733,essv96139,essv101189,essv98314,essv97456,essv100553,essv101068,essv95865,essv93940 M 51 0 38 ARHGEF2,ASH1L,ASH1L-AS1,CLK2,DAP3,FAM189B,FDPS,GON4L,HCN3,KIAA0907,MIR555,MSTO1,MSTO2P,PKLR,POU5F1P4,RIT1,RUSC1,RUSC1-AS1,RXFP4,SCAMP3,SCARNA4,SNORA42,SYT11,YY1AP1 21606,21616,21618,21634,21656,21693,21721,21772,21791,21802,21805,21837,21841,21847,21863,21872,21879,21909,21911,21932,21938,21939,21944,22007,22011,22075,22086,22127,22128,22170,22231,22233,22261,22275,22278,22286,22298,22352 esv23319 1 153493683 153529298 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17013 M 40 1 0 CLK2,HCN3,PKLR,SCAMP3 NA15510 nsv436027 1 153497176 153527947 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465853 M 2 1 0 CLK2,HCN3,PKLR,SCAMP3 NA15510 nsv3010 1 153502429 153508303 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11108 M 9 1 0 CLK2 NA15510 nsv90 1 153502429 153508303 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv90 M 1 1 0 CLK2 NA15510 esv3384525 1 153502452 153505050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691992 M 185 1 0 CLK2 NA19239 nsv101 1 153511518 153514946 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv101 M 1 1 0 HCN3 NA15510 nsv3021 1 153511518 153514946 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11114 M 9 1 0 HCN3 NA15510 nsv3032 1 153522034 153554600 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2561 M 9 1 0 FDPS,HCN3,PKLR NA18555 nsv946413 1 153553573 153563284 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798179,nssv1798231,nssv1798191,nssv1798194,nssv1798187,nssv1798211,nssv1798243,nssv1798215,nssv1798172,nssv1798200,nssv1798164,nssv1798250,nssv1798167,nssv1798219,nssv1798163,nssv1798217,nssv1798173,nssv1798223,nssv1798239,nssv1798185,nssv1798247,nssv1798252,nssv1798171,nssv1798226,nssv1798176,nssv1798202,nssv1798181,nssv1798204,nssv1798170,nssv1798227,nssv1798168,nssv1798225,nssv1798177,nssv1798220,nssv1798182,nssv1798218,nssv1798183,nssv1798206,nssv1798165,nssv1798209,nssv1798242,nssv1799182,nssv1798190,nssv1798249,nssv1798180,nssv1798221,nssv1798166,nssv1798201,nssv1798240,nssv1798203,nssv1798248,nssv1798228,nssv1798241,nssv1798230,nssv1798246,nssv1798192,nssv1798175,nssv1798207,nssv1798169,nssv1798212,nssv1798245,nssv1798208,nssv1798193,nssv1798229,nssv1798178,nssv1798188,nssv1798186,nssv1798236,nssv1798174,nssv1798251,nssv1798184,nssv1798237,nssv1798244,nssv1798232,nssv1798253,nssv1798213,nssv1798195,nssv1798162,nssv1798235,nssv1798234,nssv1798199,nssv1798189,nssv1798224,nssv1798196,nssv1798197,nssv1799180,nssv1798214,nssv1798238,nssv1798222,nssv1799181,nssv1798216,nssv1798210,nssv1798233,nssv1798254,nssv1798198,nssv1798205,nssv1798255 M 97 10 0 FDPS,RUSC1,RUSC1-AS1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946415 1 153670260 153670760 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799227,nssv1799195,nssv1799183,nssv1799266,nssv1799235,nssv1799200,nssv1799218,nssv1799196,nssv1799275,nssv1799202,nssv1799257,nssv1799205,nssv1799206,nssv1799188,nssv1799237,nssv1799264,nssv1799231,nssv1799262,nssv1799223,nssv1799267,nssv1799219,nssv1799208,nssv1799244,nssv1799260,nssv1799274,nssv1799212,nssv1799254,nssv1799191,nssv1799258,nssv1799197,nssv1799217,nssv1799265,nssv1799221,nssv1799204,nssv1799230,nssv1799263,nssv1799247,nssv1799201,nssv1799273,nssv1799211,nssv1799232,nssv1799198,nssv1799246,nssv1799187,nssv1799213,nssv1799269,nssv1799250,nssv1799194,nssv1799256,nssv1799268,nssv1799226,nssv1799184,nssv1799279,nssv1799199,nssv1799216,nssv1799193,nssv1799272,nssv1799189,nssv1799239,nssv1799190,nssv1799225,nssv1799186,nssv1799238,nssv1799203,nssv1799271,nssv1799192,nssv1799210,nssv1799261,nssv1799229,nssv1799207,nssv1799242,nssv1799214,nssv1799222,nssv1799185,nssv1799251,nssv1799236,nssv1799243,nssv1799209,nssv1799228,nssv1799224,nssv1799248,nssv1799278,nssv1799253,nssv1799234,nssv1799233,nssv1799255,nssv1799240,nssv1799241,nssv1799252,nssv1799270,nssv1799277,nssv1799245,nssv1799259,nssv1799220,nssv1799215,nssv1799249,nssv1799276 M 97 10 0 ASH1L,POU5F1P4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946416 1 153670760 153672102 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799296,nssv1799334,nssv1799351,nssv1799316,nssv1799297,nssv1799328,nssv1799282,nssv1799320,nssv1799358,nssv1799345,nssv1799299,nssv1799332,nssv1799293,nssv1799315,nssv1799354,nssv1799341,nssv1799285,nssv1799303,nssv1799302,nssv1799314,nssv1799356,nssv1799313,nssv1799350,nssv1799344,nssv1799357,nssv1799347,nssv1799300,nssv1799323,nssv1799287,nssv1799329,nssv1799288,nssv1799343,nssv1799353,nssv1799346,nssv1799305,nssv1799327,nssv1799298,nssv1799310,nssv1799301,nssv1799280,nssv1799294,nssv1799319,nssv1799284,nssv1799326,nssv1799352,nssv1799306,nssv1799295,nssv1799339,nssv1799359,nssv1799324,nssv1799309,nssv1799322,nssv1799291,nssv1799348,nssv1799283,nssv1799338,nssv1799281,nssv1799337,nssv1799290,nssv1799336,nssv1799311,nssv1799312,nssv1799289,nssv1799325,nssv1799292,nssv1799321,nssv1799304,nssv1799307,nssv1799308,nssv1799331,nssv1799355,nssv1799335,nssv1799286,nssv1799330,nssv1799340,nssv1799342,nssv1799333,nssv1799349,nssv1799317,nssv1799318 M 97 10 0 ASH1L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2476624 1 153704665 153706183 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5372813 M 1 0 1 ASH1L NA18507 esv3890671 1 153745521 153855744 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788909 M 3017 1 0 ASH1L,ASH1L-AS1,MSTO1,MSTO2P nsv946417 1 153796565 153799767 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1799377,nssv1799422,nssv1799379,nssv1799420,nssv1799376,nssv1799454,nssv1799438,nssv1799432,nssv1799391,nssv1799417,nssv1799365,nssv1799436,nssv1799441,nssv1799394,nssv1799373,nssv1799392,nssv1799382,nssv1799451,nssv1799380,nssv1799453,nssv1799437,nssv1799396,nssv1799443,nssv1799452,nssv1799369,nssv1799455,nssv1799362,nssv1799414,nssv1799363,nssv1799400,nssv1799444,nssv1799412,nssv1799439,nssv1799397,nssv1799378,nssv1799434,nssv1799368,nssv1799426,nssv1799370,nssv1799395,nssv1799381,nssv1799408,nssv1799440,nssv1799435,nssv1799385,nssv1799409,nssv1799366,nssv1799421,nssv1799364,nssv1799456,nssv1799374,nssv1799427,nssv1799442,nssv1799383,nssv1799388,nssv1799431,nssv1799446,nssv1799403,nssv1799367,nssv1799423,nssv1799371,nssv1799398,nssv1799361,nssv1799393,nssv1799445,nssv1799425,nssv1799375,nssv1799450,nssv1799389,nssv1799386,nssv1799384,nssv1799433,nssv1799372,nssv1799424,nssv1799390,nssv1799449,nssv1799406,nssv1799407,nssv1799448,nssv1799428,nssv1799402,nssv1799360,nssv1799419,nssv1799429,nssv1799415,nssv1799416,nssv1799399,nssv1799404,nssv1799418,nssv1799411,nssv1799430,nssv1799401,nssv1799405,nssv1799413,nssv1799387,nssv1799447,nssv1799410 M 97 10 0 ASH1L,ASH1L-AS1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946418 1 153820021 153824231 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800157,nssv1800161,nssv1799479,nssv1800106,nssv1799485,nssv1800110,nssv1799477,nssv1800127,nssv1799474,nssv1800146,nssv1799476,nssv1800168,nssv1799463,nssv1800111,nssv1799470,nssv1800134,nssv1800154,nssv1800113,nssv1799475,nssv1800144,nssv1800150,nssv1799483,nssv1799478,nssv1800145,nssv1800152,nssv1800122,nssv1799460,nssv1800116,nssv1799465,nssv1800131,nssv1800158,nssv1800124,nssv1799469,nssv1800128,nssv1800151,nssv1799480,nssv1800155,nssv1800119,nssv1799466,nssv1800149,nssv1799464,nssv1800143,nssv1799482,nssv1800108,nssv1799471,nssv1800136,nssv1799461,nssv1800139,nssv1799486,nssv1800160,nssv1799472,nssv1800166,nssv1800159,nssv1800120,nssv1800104,nssv1800163,nssv1800156,nssv1800117,nssv1800153,nssv1800126,nssv1799459,nssv1800109,nssv1799458,nssv1800114,nssv1799462,nssv1800162,nssv1799467,nssv1800123,nssv1799481,nssv1800137,nssv1799468,nssv1800135,nssv1799473,nssv1800129,nssv1800147,nssv1799487,nssv1800141,nssv1800115,nssv1800165,nssv1799484,nssv1800107,nssv1800167,nssv1800142,nssv1800132,nssv1800118,nssv1800130,nssv1800112,nssv1800105,nssv1800140,nssv1800164,nssv1800148,nssv1800133,nssv1800138,nssv1800125,nssv1800121,nssv1800169,nssv1799457 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv428246 1 153824821 154052455 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv451920 M 62 1 0 DAP3,GON4L,MSTO1,MSTO2P,YY1AP1 HGDP00474 nsv436522 1 153826137 153940873 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465854 M 2 0 1 DAP3,MSTO1,MSTO2P,YY1AP1 NA18505 nsv946419 1 153827772 153897368 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798815,nssv1798794,nssv1800172,nssv1798802,nssv1800198,nssv1798798,nssv1800187,nssv1798785,nssv1800183,nssv1798825,nssv1800177,nssv1798799,nssv1800189,nssv1798782,nssv1800181,nssv1798779,nssv1798810,nssv1798818,nssv1800179,nssv1798797,nssv1800175,nssv1798801,nssv1800195,nssv1798780,nssv1798806,nssv1798775,nssv1800186,nssv1798805,nssv1800171,nssv1800203,nssv1798808,nssv1798791,nssv1800178,nssv1800207,nssv1798814,nssv1800210,nssv1798809,nssv1798789,nssv1800192,nssv1798823,nssv1800188,nssv1798783,nssv1800185,nssv1798817,nssv1800199,nssv1800170,nssv1800191,nssv1798774,nssv1800173,nssv1800208,nssv1800174,nssv1798824,nssv1800176,nssv1798781,nssv1800182,nssv1800213,nssv1798807,nssv1798821,nssv1798813,nssv1800196,nssv1800184,nssv1798777,nssv1798812,nssv1798784,nssv1800190,nssv1798822,nssv1800201,nssv1798793,nssv1798811,nssv1798787,nssv1800180,nssv1800200,nssv1800194,nssv1800214,nssv1798800,nssv1798790,nssv1800205,nssv1800197,nssv1800206,nssv1800211,nssv1798816,nssv1800209,nssv1800212,nssv1798795,nssv1798820,nssv1798819,nssv1798792,nssv1798778,nssv1798803,nssv1798786,nssv1800204,nssv1798804,nssv1798776,nssv1798788,nssv1800193,nssv1798796,nssv1800202 M 97 10 0 MSTO1,MSTO2P,YY1AP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547965 1 153829776 153955224 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724909 M 17421 1 0 DAP3,MSTO1,MSTO2P,YY1AP1 nsv3043 1 153840678 153875198 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1591 M 9 0 1 MSTO1,MSTO2P NA19240 nsv482134 1 153846631 153851381 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558495 M 1 1 0 MSTO1,MSTO2P KB1 nsv946420 1 153914846 153916000 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1798841,nssv1800457,nssv1798843,nssv1798856,nssv1798842,nssv1800439,nssv1798845,nssv1798868,nssv1798838,nssv1800421,nssv1800448,nssv1800435,nssv1798831,nssv1798870,nssv1798836,nssv1800425,nssv1798829,nssv1798859,nssv1800444,nssv1798867,nssv1798835,nssv1798826,nssv1798846,nssv1798864,nssv1800447,nssv1800424,nssv1800443,nssv1800426,nssv1798840,nssv1800423,nssv1798847,nssv1800414,nssv1800449,nssv1800441,nssv1800445,nssv1800418,nssv1798844,nssv1800431,nssv1798834,nssv1798853,nssv1798830,nssv1800422,nssv1798827,nssv1798865,nssv1800446,nssv1800436,nssv1800450,nssv1800442,nssv1798855,nssv1798871,nssv1800452,nssv1800461,nssv1798854,nssv1800454,nssv1798832,nssv1800427,nssv1798857,nssv1798849,nssv1800451,nssv1800415,nssv1798851,nssv1800462,nssv1798837,nssv1798869,nssv1798848,nssv1800432,nssv1798850,nssv1798861,nssv1798833,nssv1800429,nssv1798839,nssv1798852,nssv1798828,nssv1800453,nssv1798858,nssv1800459,nssv1800420,nssv1800417,nssv1798863,nssv1800412,nssv1800437,nssv1798862,nssv1800456,nssv1800458,nssv1800430,nssv1798860,nssv1800438,nssv1800455,nssv1800428,nssv1800460,nssv1800434,nssv1800440,nssv1800419,nssv1800433,nssv1800416,nssv1798866,nssv1800413 M 97 10 0 YY1AP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3054 1 153920459 153940133 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1601,nssv4721 M 9 0 2 DAP3,YY1AP1 NA19129,NA19240 nsv946421 1 153922854 153925700 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800546,nssv1800524,nssv1800491,nssv1800537,nssv1800494,nssv1800516,nssv1800480,nssv1800532,nssv1800545,nssv1800498,nssv1800548,nssv1800513,nssv1800468,nssv1800556,nssv1800482,nssv1800554,nssv1800544,nssv1800538,nssv1800478,nssv1800552,nssv1800540,nssv1800507,nssv1800483,nssv1800486,nssv1800465,nssv1800495,nssv1800479,nssv1800508,nssv1800492,nssv1800505,nssv1800488,nssv1800551,nssv1800471,nssv1800497,nssv1800470,nssv1800523,nssv1800466,nssv1800536,nssv1800481,nssv1800504,nssv1800485,nssv1800522,nssv1800543,nssv1800520,nssv1800484,nssv1800519,nssv1800472,nssv1800496,nssv1800467,nssv1800463,nssv1800547,nssv1800528,nssv1800476,nssv1800515,nssv1800549,nssv1800511,nssv1800542,nssv1800521,nssv1800473,nssv1800510,nssv1800469,nssv1800490,nssv1800475,nssv1800526,nssv1800477,nssv1800559,nssv1800541,nssv1800539,nssv1800464,nssv1800509,nssv1800487,nssv1800534,nssv1800474,nssv1800533,nssv1800518,nssv1800558,nssv1800529,nssv1800502,nssv1800501,nssv1800550,nssv1800503,nssv1800517,nssv1800512,nssv1800500,nssv1800489,nssv1800535,nssv1800527,nssv1800493,nssv1800525,nssv1800506,nssv1800499,nssv1800531,nssv1800514,nssv1800530,nssv1800557,nssv1800555,nssv1800553 M 97 10 0 DAP3,YY1AP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv28903 1 153926378 153931106 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15603 M 40 0 15 DAP3 NA18502,NA18505,NA18517,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19240,NA19257 nsv514012 1 153926400 153930832 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2851127,nssv2851092,nssv2849162,nssv2851112,nssv2851094,nssv2851078,nssv2851117,nssv2851111,nssv2849177,nssv2849163,nssv2851107,nssv2849178,nssv2849158,nssv2851082,nssv2849128,nssv2851141,nssv2849179,nssv2851086,nssv2851109,nssv2849215,nssv2849225,nssv2849143,nssv2851106,nssv2849129,nssv2851144,nssv2849185,nssv2851104,nssv2849142,nssv2849205,nssv2851101,nssv2849132,nssv2849213,nssv2851115,nssv2849167,nssv2849166,nssv2849221,nssv2849192,nssv2849161,nssv2849152,nssv2849219,nssv2851095,nssv2849202,nssv2849220,nssv2849201,nssv2849196,nssv2851097,nssv2851124,nssv2849156,nssv2849230,nssv2849164,nssv2851079,nssv2849189,nssv2851119,nssv2849172,nssv2849190,nssv2851130,nssv2851143,nssv2849200,nssv2849214,nssv2851108,nssv2851110,nssv2849146,nssv2849198,nssv2851080,nssv2851103,nssv2849127,nssv2851139,nssv2849175,nssv2849212,nssv2851133,nssv2849160,nssv2849226,nssv2849208,nssv2849148,nssv2851081,nssv2851088,nssv2851150,nssv2851126,nssv2849182,nssv2849232,nssv2849193,nssv2849169,nssv2851134,nssv2851114,nssv2849228,nssv2849151,nssv2851090,nssv2851149,nssv2849184,nssv2849231,nssv2851128,nssv2849186,nssv2849150,nssv2849197,nssv2849195,nssv2849165,nssv2851120,nssv2851123,nssv2849147,nssv2849218,nssv2849145,nssv2849227,nssv2851121,nssv2849204,nssv2849222,nssv2849210,nssv2851089,nssv2851129,nssv2851085,nssv2849171,nssv2849180,nssv2851099,nssv2849141,nssv2849159,nssv2849133,nssv2849187,nssv2851137,nssv2849216,nssv2849209,nssv2851084,nssv2849138,nssv2851113,nssv2849131,nssv2851096,nssv2851131,nssv2849203,nssv2849155,nssv2851138,nssv2849173,nssv2851136,nssv2849217,nssv2851102,nssv2849211,nssv2851140,nssv2851105,nssv2849206,nssv2851100,nssv2849157,nssv2849137,nssv2851132,nssv2849154,nssv2851142,nssv2849191,nssv2849130,nssv2849207,nssv2851148,nssv2851087,nssv2849174,nssv2849136,nssv2851146,nssv2849181,nssv2849229,nssv2849168,nssv2849224,nssv2849139,nssv2849134,nssv2849194,nssv2849176,nssv2849153,nssv2849135,nssv2849183,nssv2851125,nssv2849199,nssv2851147,nssv2849149,nssv2851083,nssv2851145,nssv2851152,nssv2849188,nssv2851093,nssv2851118,nssv2851116,nssv2849144,nssv2851122,nssv2851135,nssv2849223,nssv2851091,nssv2849140,nssv2851151,nssv2851098,nssv2849170 M 2366 0 181 DAP3 NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18509,NA18516,NA18517,NA18518,NA18519,NA18522,NA18852,NA18855,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA19092,NA19093,NA19094,NA19096,NA19098,NA19099,NA19101,NA19102,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19129,NA19130,NA19131,NA19132,NA19137,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19214,NA19222,NA19223,NA19224,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19257,NA21307,NA21310,NA21312,NA21313,NA21316,NA21317,NA21359,NA21361,NA21384,NA21387,NA21389,NA21391,NA21423,NA21425,NA21441,NA21442,NA21454,NA21475,NA21477,NA21478,NA21480,NA21485,NA21487,NA21488,NA21490,NA21494,NA21522,NA21524,NA21525,NA21580,NA21581,NA21583,NA21600,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 esv2421343 1 153927851 153929981 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5102495,essv5015160,essv5057601,essv5004800,essv5122935,essv5152390,essv5138258,essv5142766,essv5104218,essv5096164,essv5143287,essv5042233,essv5014964,essv5007241,essv5058802,essv5106271,essv5103905,essv5134992,essv5099283,essv5111481,essv5048207,essv5070870,essv5048620,essv5107818,essv5086494,essv5013747,essv5036905,essv5126431,essv5044724,essv5107767,essv5160422,essv5128268,essv5010550,essv5097753,essv5110190,essv5056589,essv5120323,essv5004797,essv5125861,essv5088537,essv5018288,essv5134323,essv5118668,essv5138331,essv5041981,essv5042179,essv5080178,essv5119784,essv5050509,essv5124507,essv5072161,essv5142925,essv5097012,essv5049065,essv5030416,essv5116477,essv5076304,essv5025377,essv5075791,essv5005968,essv5113159,essv5046503,essv5156969,essv5135169,essv5092814,essv5089693,essv5093527,essv5158490,essv5136117,essv5100614,essv5143374,essv5135409,essv5077919,essv5153386,essv5055664,essv5099567,essv5031185,essv5078611,essv5047393,essv5116954,essv5114962,essv5148636,essv5054798,essv5082617,essv5049505,essv5017745,essv5082359,essv5039636,essv5047016,essv5150677,essv5055875,essv5027627,essv5027784,essv5023075,essv5062015,essv5141720,essv5083199,essv5154168,essv5056251,essv5136124,essv5134912,essv5091145,essv5023471,essv5131505,essv5127173,essv5085644,essv5011252,essv5095383,essv5086750,essv5025478,essv5019850,essv5033033,essv5124567,essv5024587,essv5049051,essv5143029,essv5117018,essv5085340,essv5105118,essv5063867,essv5107446,essv5065081,essv5128353,essv5026670,essv5007917,essv5060818,essv5048311,essv5007355,essv5154711,essv5061844,essv5104683,essv5066499,essv5150703,essv5011327,essv5037022,essv5083089,essv5150822,essv5055515,essv5155105,essv5075366,essv5116939,essv5024662,essv5136557,essv5083923,essv5114660,essv5088082,essv5038257,essv5137543,essv5085742,essv5102965,essv5090489,essv5113213,essv5059642,essv5083104,essv5046750,essv5008550,essv5122396,essv5072654,essv5007823,essv5054383,essv5051973,essv5097846,essv5152149,essv5102754,essv5027712,essv5133700,essv5010259,essv5045049,essv5135663,essv5110917,essv5049473,essv5084914,essv5077794,essv5093269,essv5029778,essv5073759,essv5131936,essv5122103,essv5133468,essv5110164,essv5035325,essv5141616,essv5091706,essv5004280,essv5074918,essv5142449,essv5024710,essv5065503,essv5048478,essv5032140,essv5108216,essv5046152,essv5063803,essv5126366,essv5100345,essv5012389,essv5036802,essv5079567,essv5002645,essv5059751,essv5156617,essv5017329,essv5050767,essv5016549,essv5147126,essv5054894,essv5101322,essv5066818,essv5013617,essv5024735,essv5103532,essv5073563,essv5076680,essv5014072,essv5143190,essv5018518,essv5149617,essv5017798,essv5067529,essv5034896,essv5095500,essv5091260,essv5099539,essv5158985,essv5144270,essv5138128,essv5018280,essv5081132,essv5070156,essv5148459,essv5071511,essv5114550,essv5106220,essv5093226,essv5131337,essv5071212,essv5116376,essv5079525,essv5043403,essv5146509,essv5127740,essv5137651,essv5097650,essv5102763,essv5013868,essv5140907,essv5023768,essv5050307,essv5007777,essv5129035,essv5022809,essv5045809,essv5065054,essv5027102,essv5072794,essv5078579,essv5046959,essv5005348,essv5147931,essv5001942,essv5144518,essv5087272,essv5082415,essv5027057,essv5027006,essv5073038,essv5101500,essv5121457,essv5042828,essv5034135,essv5007232,essv5054541,essv5130135,essv5103556,essv5158139,essv5033080,essv5006897,essv5150799,essv5157524,essv5083082,essv5023861,essv5033745,essv5052738,essv5094777,essv5042931,essv5119892,essv5126242,essv5006255,essv5103607,essv5080675,essv5121557,essv5070401,essv5067065,essv5043029,essv5046946,essv5134072,essv5105091,essv5145623,essv5004683,essv5132713,essv5021450 M 1184 0 301 DAP3 NA12873,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18505,NA18509,NA18516,NA18517,NA18518,NA18519,NA18520,NA18613,NA18855,NA18857,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18909,NA18910,NA18911,NA18914,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA19031,NA19035,NA19036,NA19038,NA19041,NA19046,NA19096,NA19098,NA19099,NA19102,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19129,NA19130,NA19131,NA19132,NA19137,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19174,NA19175,NA19178,NA19179,NA19180,NA19181,NA19182,NA19184,NA19186,NA19190,NA19191,NA19192,NA19193,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19203,NA19204,NA19206,NA19207,NA19208,NA19209,NA19214,NA19215,NA19223,NA19226,NA19236,NA19237,NA19238,NA19239,NA19240,NA19247,NA19248,NA19249,NA19257,NA19307,NA19308,NA19313,NA19314,NA19315,NA19316,NA19317,NA19318,NA19321,NA19324,NA19334,NA19346,NA19347,NA19352,NA19360,NA19373,NA19374,NA19376,NA19382,NA19383,NA19390,NA19393,NA19394,NA19396,NA19397,NA19398,NA19399,NA19403,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19440,NA19444,NA19446,NA19448,NA19449,NA19452,NA19456,NA19457,NA19462,NA19466,NA19471,NA19472,NA19473,NA19474,NA19625,NA19700,NA19703,NA19705,NA19712,NA19756,NA19759,NA19760,NA19835,NA19900,NA19904,NA19916,NA19917,NA19918,NA19921,NA19982,NA19983,NA19985,NA20126,NA20128,NA20276,NA20279,NA20281,NA20282,NA20284,NA20287,NA20288,NA20289,NA20291,NA20292,NA20294,NA20295,NA20297,NA20300,NA20317,NA20319,NA20322,NA20334,NA20335,NA20336,NA20337,NA20340,NA20341,NA20342,NA20343,NA20344,NA20345,NA20348,NA20349,NA20350,NA20356,NA20357,NA20358,NA20359,NA20360,NA21297,NA21311,NA21312,NA21313,NA21314,NA21316,NA21317,NA21320,NA21352,NA21353,NA21359,NA21361,NA21368,NA21370,NA21379,NA21387,NA21389,NA21423,NA21424,NA21425,NA21436,NA21448,NA21451,NA21454,NA21473,NA21475,NA21477,NA21478,NA21488,NA21491,NA21494,NA21509,NA21525,NA21529,NA21574,NA21577,NA21578,NA21580,NA21583,NA21587,NA21596,NA21600,NA21616,NA21617,NA21620,NA21634,NA21635,NA21636,NA21647,NA21648,NA21678,NA21682,NA21689,NA21716,NA21717,NA21718,NA21740,NA21825 nsv442072 1 153927851 153929981 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1618622,nssv1618677,nssv1618684,nssv1618688,nssv1618623,nssv1618675,nssv1618687,nssv1618666,nssv1618620,nssv1618680,nssv1618630,nssv1618658,nssv1618678,nssv1618639,nssv1618667,nssv1618674,nssv1618652,nssv1618651,nssv1618638,nssv1618660,nssv1618627,nssv1618628,nssv1618655,nssv1618624,nssv1618686,nssv1618661,nssv1618679,nssv1618670,nssv1618631,nssv1618644,nssv1618685,nssv1618621,nssv1618635,nssv1618681,nssv1618637,nssv1618653,nssv1618682,nssv1618659,nssv1618633,nssv1618690,nssv1618632,nssv1618672,nssv1618668,nssv1618636,nssv1618647,nssv1618654,nssv1618683,nssv1618665,nssv1618671,nssv1618691,nssv1618673,nssv1618641,nssv1618663,nssv1618689,nssv1618649,nssv1618648,nssv1618625,nssv1618650,nssv1618642,nssv1618664,nssv1618643,nssv1618657,nssv1618656,nssv1618634,nssv1618669,nssv1618646,nssv1618626,nssv1618645,nssv1618662,nssv1618676,nssv1618629,nssv1618640 M 270 0 72 DAP3 NA18500,NA18501,NA18502,NA18503,NA18504,NA18505,NA18515,NA18516,NA18522,NA18855,NA18857,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18870,NA18871,NA18872,NA18912,NA18913,NA18914,NA19092,NA19093,NA19094,NA19098,NA19099,NA19101,NA19102,NA19116,NA19119,NA19120,NA19127,NA19129,NA19130,NA19131,NA19132,NA19137,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19192,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19222,NA19223,NA19238,NA19239,NA19240 nsv547966 1 153928541 153929950 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724910 M 17421 0 1 DAP3 nsv472921 1 153930035 153930035 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014812 M 9 1 0 DAP3 NA19129 nsv3065 1 153949392 153994148 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7695 M 9 0 1 DAP3,GON4L,MSTO2P NA12156 nsv946422 1 153982844 153988860 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800566,nssv1800654,nssv1800588,nssv1800649,nssv1800577,nssv1800596,nssv1800645,nssv1800628,nssv1800575,nssv1800613,nssv1800642,nssv1800651,nssv1800591,nssv1800606,nssv1800638,nssv1800595,nssv1800565,nssv1800592,nssv1800579,nssv1800603,nssv1800637,nssv1800583,nssv1800580,nssv1800604,nssv1800567,nssv1800629,nssv1800585,nssv1800635,nssv1800568,nssv1800656,nssv1800576,nssv1800610,nssv1800578,nssv1800612,nssv1800640,nssv1800594,nssv1800581,nssv1800602,nssv1800564,nssv1800633,nssv1800582,nssv1800560,nssv1800639,nssv1800620,nssv1800646,nssv1800619,nssv1800573,nssv1800618,nssv1800563,nssv1800593,nssv1800643,nssv1800650,nssv1800561,nssv1800616,nssv1800571,nssv1800605,nssv1800574,nssv1800601,nssv1800569,nssv1800617,nssv1800641,nssv1800630,nssv1800644,nssv1800652,nssv1800572,nssv1800648,nssv1800570,nssv1800615,nssv1800589,nssv1800626,nssv1800562,nssv1800634,nssv1800584,nssv1800621,nssv1800608,nssv1800625,nssv1800598,nssv1800636,nssv1800655,nssv1800647,nssv1800653,nssv1800614,nssv1800587,nssv1800624,nssv1800599,nssv1800597,nssv1800609,nssv1800623,nssv1800600,nssv1800586,nssv1800631,nssv1800632,nssv1800590,nssv1800607,nssv1800622,nssv1800611,nssv1800627 M 97 10 0 GON4L,MSTO2P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946423 1 153998867 154003952 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800674,nssv1800713,nssv1800685,nssv1800694,nssv1800658,nssv1800696,nssv1801660,nssv1801644,nssv1800662,nssv1800719,nssv1800663,nssv1800710,nssv1800676,nssv1800690,nssv1800664,nssv1800693,nssv1800666,nssv1800708,nssv1801662,nssv1800703,nssv1800688,nssv1801670,nssv1800673,nssv1801645,nssv1801658,nssv1801669,nssv1801663,nssv1800680,nssv1800682,nssv1800692,nssv1800677,nssv1801647,nssv1800665,nssv1801657,nssv1800686,nssv1800707,nssv1800675,nssv1800701,nssv1800668,nssv1800700,nssv1801665,nssv1801668,nssv1800678,nssv1800689,nssv1800661,nssv1801651,nssv1801661,nssv1801649,nssv1800660,nssv1801650,nssv1800659,nssv1801653,nssv1801667,nssv1800704,nssv1800670,nssv1800699,nssv1800679,nssv1801655,nssv1801659,nssv1800702,nssv1800667,nssv1800717,nssv1801666,nssv1800714,nssv1800669,nssv1800691,nssv1800671,nssv1800715,nssv1801664,nssv1800657,nssv1800681,nssv1801648,nssv1800672,nssv1801646,nssv1801671,nssv1800698,nssv1800697,nssv1800716,nssv1800709,nssv1800705,nssv1801675,nssv1801652,nssv1800718,nssv1800712,nssv1801672,nssv1801673,nssv1801656,nssv1801676,nssv1800706,nssv1800695,nssv1800687,nssv1801674,nssv1800683,nssv1801677,nssv1801654,nssv1800684,nssv1800711 M 97 10 0 GON4L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1003170 1 154028828 154103188 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488152 M 29084 1 0 GON4L,SYT11 nsv521958 1 154084412 154086281 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694727 M 2026 0 1 GON4L nsv509513 1 154168737 154415205 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623800,nssv623799 M 4 1 0 ARHGEF2,KIAA0907,LAMTOR2,LMNA,MEX3A,MIR6738,RAB25,RXFP4,SEMA4A,SSR2,UBQLN4 NA18994 esv1724383 1 154241035 154241035 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4088708 M 2 1 0 "" HuRef dgv79n67 1 154309887 154310949 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824809,nsv824786,nsv824797,nsv824820 M 31 4 0 MEX3A NA18564,NA18969,NA18997,NA18999 nsv824831 1 154317117 154320498 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432363 M 31 1 0 LMNA,MEX3A NA18972 esv3428000 1 154333552 154336050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691993 M 185 1 0 LMNA NA19239 esv6098 1 154453125 154453280 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28539 M 1 0 0 PMF1,PMF1-BGLAP nsv509524 1 154474689 154544852 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623801 M 4 1 0 BGLAP,C1orf85,PAQR6,PMF1,PMF1-BGLAP,SMG5,TMEM79,VHLL NA18994 nsv547967 1 154478100 154484479 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724911 M 17421 1 0 BGLAP,PAQR6,PMF1-BGLAP nsv547968 1 154518761 154531272 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724912 M 17421 0 1 C1orf85,SMG5,TMEM79 esv1449360 1 154564461 154564461 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3823298 M 2 1 0 CCT3 HuRef nsv470742 1 154601735 154620991 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547782 M 443 0 1 RHBG HGDP00697 esv3426894 1 154607660 154607660 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740939 M 185 1 0 RHBG NA19240 nsv824842 1 154672305 154673322 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440838 M 31 1 0 "" NA18969 nsv3077 1 154777358 154796655 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7086,nssv4730 M 9 0 2 IQGAP3 NA12156,NA19129 nsv436331 1 154792346 154795797 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465855 M 2 0 1 IQGAP3 NA18505 esv2506598 1 154792518 154795980 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5289905 M 1 0 1 IQGAP3 NA18507 esv994163 1 154792952 154796564 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564856 M 3 0 1 IQGAP3 HuRef nsv511716 1 154793044 154795559 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626358 M 1 0 1 IQGAP3 1 esv8068 1 154793094 154795835 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30509 M 1 0 0 IQGAP3 esv2384844 1 154793140 154795767 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4968609 M 1 0 1 IQGAP3 NA18507 esv2824 1 154793297 154795636 CNV loss Wang_et_al_2008 18987735 Sequencing essv25265 M 1 0 1 IQGAP3 YH esv1007783 1 154793341 154795571 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568604 M 3 0 1 IQGAP3 HuRef esv1268515 1 154793347 154795578 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4340554 M 2 0 1 IQGAP3 HuRef nsv523181 1 154816878 154943177 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698894 M 2026 0 1 APOA1BP,BCAN,CRABP2,GPATCH4,HAPLN2,NES,TTC24 esv3307944 1 154822878 154822879 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836663 M 185 1 0 TTC24 NA19239 esv3444518 1 154822879 154822885 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673775,essv8673777 M 185 2 0 TTC24 NA19239,NA19240 nsv824853 1 154861219 154861705 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1428053 M 31 1 0 HAPLN2 AK10 nsv521401 1 154861280 154881818 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694442 M 2026 0 1 BCAN,HAPLN2 nsv824864 1 154861406 154862285 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1425528 M 31 1 0 HAPLN2 AK4 nsv521552 1 154880141 154881818 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698167 M 2026 0 1 BCAN nsv831648 1 154930501 155148542 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450795,nssv1450784 M 95 0 2 CRABP2,HDGF,INSRR,ISG20L2,MRPL24,NTRK1,PEAR1,PRCC,RRNAD1,SH2D2A nsv3088 1 154947248 154957676 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7706 M 9 1 0 "" NA12156 esv2495964 1 154971378 154972285 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5208474 M 1 1 0 RRNAD1 NA18507 esv3326332 1 154971810 154972075 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652046 M 185 1 0 RRNAD1 NA19240 esv1475923 1 154971972 154971972 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4210198 M 2 1 0 RRNAD1 HuRef nsv819403 1 154978334 154978701 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418920 M 2 0 1 HDGF AK1 nsv819859 1 154996956 155003668 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419789 M 2 0 1 "" AK1 nsv831659 1 155007575 155216620 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450806 M 95 0 1 ARHGEF11,INSRR,LRRC71,MIR765,NTRK1,PEAR1,PRCC,SH2D2A esv1010343 1 155058693 155061523 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563618 M 3 0 1 NTRK1 HuRef nsv998265 1 155070745 155140087 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498879 M 29084 1 0 INSRR,NTRK1,PEAR1 esv1001917 1 155073157 155073208 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573233 M 3 0 1 NTRK1 HuRef esv1637866 1 155073173 155073225 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4046734 M 2 0 1 NTRK1 HuRef nsv1006558 1 155113741 155143704 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488828 M 29084 1 0 NTRK1,PEAR1 esv3890682 1 155136338 155187844 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797707 M 3017 0 1 ARHGEF11,LRRC71,MIR765,PEAR1 nsv3099 1 155178084 155198495 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1611 M 9 1 0 ARHGEF11 NA19240 nsv3110 1 155213743 155257846 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3146,nssv3417 M 9 2 0 ARHGEF11 NA12878,NA18555 esv275359 1 155222838 155250663 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585141,essv2585495 M 1250 1 1 ARHGEF11 nsv946424 1 155295367 155296958 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1801687,nssv1801711,nssv1801695,nssv1801154,nssv1801685,nssv1801713,nssv1801692,nssv1801150,nssv1801690,nssv1801153,nssv1801706,nssv1801715,nssv1801147,nssv1801738,nssv1801680,nssv1801721,nssv1801144,nssv1801155,nssv1801689,nssv1801725,nssv1801683,nssv1801157,nssv1801140,nssv1801716,nssv1801697,nssv1801754,nssv1801145,nssv1801732,nssv1801679,nssv1801744,nssv1801142,nssv1801737,nssv1801148,nssv1801158,nssv1801703,nssv1801731,nssv1801141,nssv1801724,nssv1801688,nssv1801736,nssv1801686,nssv1801733,nssv1801696,nssv1801742,nssv1801709,nssv1801741,nssv1801143,nssv1801748,nssv1801684,nssv1801678,nssv1801700,nssv1801746,nssv1801682,nssv1801701,nssv1801699,nssv1801717,nssv1801149,nssv1801156,nssv1801693,nssv1801727,nssv1801691,nssv1801708,nssv1801707,nssv1801740,nssv1801146,nssv1801734,nssv1801698,nssv1801750,nssv1801694,nssv1801752,nssv1801681,nssv1801722,nssv1801702,nssv1801728,nssv1801723,nssv1801745,nssv1801730,nssv1801739,nssv1801159,nssv1801714,nssv1801720,nssv1801747,nssv1801152,nssv1801704,nssv1801729,nssv1801705,nssv1801726,nssv1801735,nssv1801718,nssv1801712,nssv1801719,nssv1801743,nssv1801751,nssv1801749,nssv1801151,nssv1801710,nssv1801753 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946426 1 155308583 155313240 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1801231,nssv1801171,nssv1801199,nssv1801172,nssv1801226,nssv1801162,nssv1801216,nssv1801244,nssv1801198,nssv1801166,nssv1801229,nssv1801188,nssv1801200,nssv1801161,nssv1801236,nssv1801176,nssv1801212,nssv1801165,nssv1801230,nssv1801241,nssv1801247,nssv1801179,nssv1801234,nssv1801237,nssv1801217,nssv1801175,nssv1801208,nssv1801243,nssv1801250,nssv1801177,nssv1801187,nssv1801239,nssv1801219,nssv1801169,nssv1801227,nssv1801238,nssv1801190,nssv1801168,nssv1801186,nssv1801178,nssv1801207,nssv1801170,nssv1801252,nssv1801180,nssv1801253,nssv1801242,nssv1801209,nssv1801240,nssv1801220,nssv1801164,nssv1801255,nssv1801181,nssv1801197,nssv1801167,nssv1801254,nssv1801189,nssv1801223,nssv1801191,nssv1801225,nssv1801246,nssv1801251,nssv1801182,nssv1801214,nssv1801163,nssv1801222,nssv1801185,nssv1801235,nssv1801245,nssv1801211,nssv1801173,nssv1801206,nssv1801174,nssv1801213,nssv1801184,nssv1801203,nssv1801224,nssv1801193,nssv1801256,nssv1801192,nssv1801196,nssv1801204,nssv1801218,nssv1801233,nssv1801228,nssv1801221,nssv1801160,nssv1801249,nssv1801201,nssv1801195,nssv1801210,nssv1801183,nssv1801205,nssv1801194,nssv1801202,nssv1801248,nssv1801232,nssv1801215 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3121 1 155353348 155365458 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7715 M 9 0 1 CYCSP52,ETV3 NA12156 nsv946427 1 155364682 155365682 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802882,nssv1801327,nssv1802879,nssv1801307,nssv1802876,nssv1801309,nssv1801274,nssv1801306,nssv1801258,nssv1801292,nssv1801269,nssv1801284,nssv1801285,nssv1801299,nssv1801286,nssv1801304,nssv1801277,nssv1801333,nssv1801262,nssv1801302,nssv1801276,nssv1801291,nssv1801260,nssv1801323,nssv1801272,nssv1802887,nssv1801267,nssv1801326,nssv1801334,nssv1801298,nssv1802880,nssv1801331,nssv1801263,nssv1801297,nssv1802878,nssv1801313,nssv1801265,nssv1801295,nssv1802883,nssv1802890,nssv1801282,nssv1802884,nssv1801275,nssv1801283,nssv1801273,nssv1801294,nssv1801259,nssv1801287,nssv1801335,nssv1801305,nssv1801261,nssv1801314,nssv1802881,nssv1802891,nssv1801278,nssv1801328,nssv1802877,nssv1801324,nssv1801266,nssv1801316,nssv1801268,nssv1801310,nssv1801288,nssv1802886,nssv1801264,nssv1802888,nssv1801271,nssv1801289,nssv1801279,nssv1802892,nssv1801281,nssv1802889,nssv1801270,nssv1801296,nssv1801320,nssv1801317,nssv1801332,nssv1801308,nssv1801311,nssv1801319,nssv1801321,nssv1801322,nssv1802893,nssv1801300,nssv1801293,nssv1801290,nssv1801312,nssv1801330,nssv1801303,nssv1801257,nssv1801318,nssv1802885,nssv1801301,nssv1801280,nssv1801329,nssv1801325,nssv1801315 M 97 10 0 CYCSP52,ETV3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv5440 1 155440245 155442221 CNV loss Ahn_et_al_2009 19470904 Sequencing essv27881 M 1 0 0 "" esv22461 1 155440279 155443057 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11153 M 40 0 3 "" NA11931,NA12776,NA15510 dgv586n54 1 155440378 155441863 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547969,nsv547976,nsv547972,nsv547971,nsv547970,nsv547975,nsv547973 M 17421 0 82 "" nsv547974 1 155440486 155442132 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv724951 M 17421 0 1 "" dgv80n67 1 155440509 155442036 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824908,nsv824897,nsv824875,nsv824886 M 31 0 17 "" AK10,AK16,AK18,AK2,AK20,AK4,AK6,NA18526,NA18547,NA18564,NA18566,NA18582,NA18592,NA18969,NA18973,NA18997,NA18999 dgv587n54 1 155440816 155442132 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547978,nsv547979,nsv547977 M 17421 0 11 "" dgv441n100 1 155470646 155644202 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011943,nsv1003039,nsv997549,nsv999712 M 29084 5 0 "" nsv1015087 1 155483433 155510713 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498397 M 29084 0 1 "" esv2761947 1 155495901 155509772 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7001533 M 1109 0 1 "" SW_1332 dgv588n54 1 155496893 155627376 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547980,nsv547981 M 17421 2 0 "" 1780854341_A nsv464095 1 155496893 155627376 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540081 M 1557 1 0 "" 1780854341_A esv3370771 1 155502363 155502374 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901378,essv8901368,essv8901369,essv8901376,essv8901373,essv8901375,essv8901377,essv8901371,essv8901374,essv8901372 M 185 10 0 "" NA12043,NA18489,NA18498,NA18542,NA18552,NA18566,NA18609,NA18861,NA19093,NA19147 esv3303920 1 155502366 155502367 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7762656,essv7762064,essv7754628,essv7744470,essv7745501,essv7755286,essv7749512,essv7762298,essv7751903,essv7745061 M 185 10 0 "" NA12043,NA18489,NA18498,NA18542,NA18552,NA18566,NA18609,NA18861,NA19093,NA19147 esv1361545 1 155536862 155536862 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3747519 M 2 1 0 "" HuRef nsv831670 1 155539223 155733368 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450817 M 95 0 1 "" esv2644164 1 155545449 155545650 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5227594 M 1 0 1 "" NA18507 nsv3132 1 155602593 155615810 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7724 M 9 0 1 "" NA12156 nsv946428 1 155613830 155616925 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802919,nssv1802941,nssv1802910,nssv1802894,nssv1802972,nssv1802968,nssv1802913,nssv1802946,nssv1802909,nssv1802963,nssv1802907,nssv1802982,nssv1802911,nssv1802960,nssv1802914,nssv1802936,nssv1802973,nssv1802965,nssv1802916,nssv1802921,nssv1802906,nssv1802953,nssv1802899,nssv1802955,nssv1802923,nssv1802944,nssv1802908,nssv1802948,nssv1802925,nssv1802981,nssv1802975,nssv1802926,nssv1802922,nssv1802938,nssv1802897,nssv1802930,nssv1802971,nssv1802964,nssv1802900,nssv1802951,nssv1802903,nssv1802988,nssv1802977,nssv1802917,nssv1802979,nssv1802969,nssv1802912,nssv1802954,nssv1802902,nssv1802984,nssv1802905,nssv1802929,nssv1802976,nssv1802959,nssv1802978,nssv1802945,nssv1802898,nssv1802932,nssv1802974,nssv1802961,nssv1802901,nssv1802939,nssv1802896,nssv1802956,nssv1802895,nssv1802990,nssv1802915,nssv1802940,nssv1802980,nssv1802986,nssv1802904,nssv1802942,nssv1802918,nssv1802989,nssv1802957,nssv1802928,nssv1802958,nssv1802943,nssv1802967,nssv1802985,nssv1802927,nssv1802935,nssv1802987,nssv1802970,nssv1802952,nssv1802933,nssv1802920,nssv1802983,nssv1802931,nssv1802947,nssv1802937,nssv1802966,nssv1802934,nssv1802924,nssv1802950,nssv1802949,nssv1802962 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3380538 1 155630103 155630122 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596457,essv9596446 M 185 2 0 "" NA11931,NA18970 esv3304738 1 155630111 155630112 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7830717,essv7826010,essv7788123,essv7814914,essv7786600,essv7774603,essv7822891,essv7772980,essv7811333,essv7771263,essv7797227,essv7820522,essv7777083,essv7803320,essv7834472,essv7821011,essv7832298,essv7807236,essv7785777,essv7815454,essv7810456,essv7835781,essv7829158,essv7796316,essv7823262,essv7784518,essv7808861,essv7822474,essv7827187,essv7775905,essv7803252,essv7791064,essv7790763,essv7770025,essv7773879,essv7771510,essv7785474,essv7794519,essv7795092,essv7819835,essv7818755,essv7782857,essv7793653 M 185 43 0 "" NA07000,NA07037,NA07051,NA11931,NA12044,NA12287,NA12716,NA12751,NA12761,NA12776,NA18498,NA18502,NA18505,NA18508,NA18532,NA18537,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18592,NA18603,NA18608,NA18609,NA18853,NA18870,NA18871,NA18944,NA18945,NA18948,NA18959,NA18964,NA18970,NA18980,NA19102 esv3358314 1 155630113 155630127 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901393,essv8901411,essv8901405,essv8901418,essv8901390,essv8901407,essv8901413,essv8901395,essv8901399,essv8901385,essv8901406,essv8901382,essv8901400,essv8901412,essv8901422,essv8901394,essv8901383,essv8901404,essv8901388,essv8901396,essv8901409,essv8901387,essv8901421,essv8901391,essv8901397,essv8901408,essv8901417,essv8901410,essv8901380,essv8901379,essv8901384,essv8901419,essv8901401,essv8901402,essv8901386,essv8901398,essv8901415,essv8901416,essv8901420,essv8901389 M 185 40 0 "" NA07000,NA07037,NA07051,NA12044,NA12716,NA12751,NA12761,NA12776,NA18498,NA18502,NA18505,NA18508,NA18532,NA18537,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18592,NA18603,NA18608,NA18609,NA18853,NA18870,NA18871,NA18944,NA18945,NA18948,NA18959,NA18964,NA18980,NA19102 nsv524895 1 155633803 155636057 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700901 M 2026 0 1 "" nsv528914 1 155633803 155653560 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705600 M 2026 0 1 "" nsv520860 1 155635826 155636057 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697654 M 2026 0 1 "" nsv831681 1 155661462 155764136 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1450828,nssv1450839 M 95 1 1 FCRL5 nsv946429 1 155720899 155728350 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802995,nssv1803067,nssv1803007,nssv1803030,nssv1803076,nssv1803038,nssv1803008,nssv1803041,nssv1803020,nssv1803052,nssv1803070,nssv1803063,nssv1802996,nssv1803059,nssv1802993,nssv1803021,nssv1803005,nssv1803050,nssv1803011,nssv1803079,nssv1802997,nssv1803057,nssv1803006,nssv1803031,nssv1803003,nssv1803047,nssv1802994,nssv1803062,nssv1803072,nssv1803028,nssv1803019,nssv1803018,nssv1803068,nssv1803060,nssv1803010,nssv1803034,nssv1803022,nssv1803065,nssv1803075,nssv1803035,nssv1803009,nssv1803023,nssv1802999,nssv1803014,nssv1803074,nssv1803058,nssv1803001,nssv1803078,nssv1802992,nssv1803045,nssv1802998,nssv1803084,nssv1803013,nssv1803061,nssv1803002,nssv1803066,nssv1803015,nssv1803056,nssv1803069,nssv1803085,nssv1803071,nssv1803081,nssv1803073,nssv1803043,nssv1803016,nssv1803053,nssv1803004,nssv1803026,nssv1803012,nssv1803048,nssv1803077,nssv1803033,nssv1803000,nssv1803046,nssv1803039,nssv1803027,nssv1803064,nssv1803029,nssv1803037,nssv1803042,nssv1803054,nssv1803036,nssv1803025,nssv1803083,nssv1803082,nssv1803024,nssv1803086,nssv1802991,nssv1803051,nssv1803040,nssv1803032,nssv1803055,nssv1803087,nssv1803017,nssv1803080,nssv1803044,nssv1803049 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv275399 1 155745150 155749897 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585862 M 1250 0 1 FCRL5 nsv946430 1 155763795 155764295 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803103,nssv1803162,nssv1803104,nssv1803176,nssv1803093,nssv1803153,nssv1803170,nssv1803114,nssv1803105,nssv1803154,nssv1803167,nssv1803160,nssv1803117,nssv1803111,nssv1803112,nssv1803141,nssv1803108,nssv1803156,nssv1803166,nssv1803143,nssv1803101,nssv1803164,nssv1803100,nssv1803147,nssv1803172,nssv1803149,nssv1803169,nssv1803125,nssv1803102,nssv1803131,nssv1803116,nssv1803115,nssv1803107,nssv1803159,nssv1803165,nssv1803181,nssv1803094,nssv1803118,nssv1803090,nssv1803128,nssv1803106,nssv1803175,nssv1803096,nssv1803144,nssv1803099,nssv1803148,nssv1803119,nssv1803127,nssv1803092,nssv1803088,nssv1803168,nssv1803157,nssv1803098,nssv1803138,nssv1803110,nssv1804108,nssv1803109,nssv1803163,nssv1803089,nssv1803178,nssv1803095,nssv1803120,nssv1803091,nssv1803130,nssv1803097,nssv1803124,nssv1803174,nssv1803132,nssv1803173,nssv1803123,nssv1803171,nssv1803150,nssv1803113,nssv1803182,nssv1803142,nssv1803155,nssv1803158,nssv1803126,nssv1803140,nssv1803133,nssv1803121,nssv1803145,nssv1803146,nssv1803151,nssv1803183,nssv1803180,nssv1803179,nssv1803129,nssv1803161,nssv1803139,nssv1803122,nssv1803136,nssv1803134,nssv1803177,nssv1803152,nssv1803135,nssv1803137 M 97 10 0 FCRL5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946431 1 155770873 155777505 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800908,nssv1804109,nssv1800840,nssv1800912,nssv1800851,nssv1800861,nssv1800838,nssv1800846,nssv1804115,nssv1800918,nssv1800839,nssv1800853,nssv1800842,nssv1800849,nssv1804110,nssv1800885,nssv1804112,nssv1800872,nssv1800905,nssv1800915,nssv1800904,nssv1800890,nssv1800900,nssv1800917,nssv1800901,nssv1800888,nssv1800854,nssv1800860,nssv1800852,nssv1800877,nssv1804111,nssv1800896,nssv1804114,nssv1800892,nssv1800844,nssv1800862,nssv1800841,nssv1800863,nssv1800906,nssv1800874,nssv1800835,nssv1800886,nssv1800843,nssv1800887,nssv1800903,nssv1800914,nssv1800848,nssv1800898,nssv1800836,nssv1800895,nssv1804117,nssv1800913,nssv1800909,nssv1800859,nssv1804119,nssv1800869,nssv1800845,nssv1800867,nssv1804118,nssv1800876,nssv1804113,nssv1800858,nssv1800902,nssv1800891,nssv1800907,nssv1800919,nssv1804116,nssv1800894,nssv1800837,nssv1800855,nssv1804120,nssv1800897,nssv1800847,nssv1800866,nssv1800850,nssv1800911,nssv1800870,nssv1800881,nssv1800856,nssv1800864,nssv1800865,nssv1800873,nssv1800857,nssv1800868,nssv1800893,nssv1800879,nssv1800875,nssv1800889,nssv1800878,nssv1800871,nssv1800883,nssv1800899,nssv1800882,nssv1800880,nssv1800916,nssv1800884,nssv1800910 M 97 10 0 FCRL5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3143 1 155783483 155788840 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1618 M 9 1 0 FCRL5 NA19240 nsv3154 1 155798460 155833166 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3426 M 9 1 0 FCRL4 NA12878 nsv508039 1 155856730 155862730 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621480,nssv622297,nssv624219,nssv618510 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 esv2761949 1 155862710 155933268 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7001544 M 1109 0 1 FCRL3 SW_0648 nsv527949 1 155878058 155886767 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704458 M 2026 0 1 "" nsv1003791 1 155887382 155914779 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485814 M 29084 0 1 FCRL3 esv5765 1 155891340 155891531 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28206 M 1 0 0 "" esv2579180 1 155893926 155895587 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5309977 M 1 0 1 "" NA18507 nsv520011 1 155914722 155940252 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697176 M 2026 0 1 FCRL3 nsv946432 1 155931387 155931978 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800932,nssv1800969,nssv1800939,nssv1800985,nssv1800924,nssv1800992,nssv1800937,nssv1800991,nssv1800935,nssv1800981,nssv1800948,nssv1801012,nssv1800999,nssv1800987,nssv1801006,nssv1801015,nssv1800949,nssv1800946,nssv1800921,nssv1800947,nssv1801003,nssv1800950,nssv1801001,nssv1800982,nssv1800930,nssv1800966,nssv1800925,nssv1800984,nssv1801002,nssv1800958,nssv1800926,nssv1800974,nssv1800998,nssv1800956,nssv1800997,nssv1800957,nssv1800922,nssv1801014,nssv1801005,nssv1800995,nssv1800951,nssv1800971,nssv1800936,nssv1800952,nssv1800928,nssv1800959,nssv1800938,nssv1801011,nssv1800929,nssv1800983,nssv1800945,nssv1800973,nssv1801000,nssv1801009,nssv1800923,nssv1801016,nssv1800942,nssv1800978,nssv1800927,nssv1800967,nssv1800941,nssv1801010,nssv1800931,nssv1800964,nssv1800933,nssv1800993,nssv1800940,nssv1800963,nssv1801004,nssv1800960,nssv1800934,nssv1800994,nssv1800944,nssv1800955,nssv1800943,nssv1800953,nssv1800988,nssv1800961,nssv1800920,nssv1800989,nssv1800970,nssv1800954,nssv1800962,nssv1800972,nssv1801008,nssv1800979,nssv1800976,nssv1800996,nssv1800990,nssv1800965,nssv1800975,nssv1800977,nssv1801013,nssv1800980,nssv1801007,nssv1800968,nssv1800986 M 97 10 0 FCRL3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946433 1 155945802 155947599 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1801026,nssv1802034,nssv1802023,nssv1802016,nssv1801027,nssv1801968,nssv1801958,nssv1802029,nssv1801023,nssv1802036,nssv1801954,nssv1801975,nssv1801020,nssv1802033,nssv1801955,nssv1801989,nssv1801018,nssv1802032,nssv1801953,nssv1802004,nssv1801956,nssv1801995,nssv1801952,nssv1802037,nssv1801022,nssv1801976,nssv1801969,nssv1801974,nssv1802022,nssv1802014,nssv1802018,nssv1801992,nssv1801960,nssv1801971,nssv1801025,nssv1802001,nssv1801959,nssv1801981,nssv1801021,nssv1802012,nssv1801970,nssv1801990,nssv1801961,nssv1802003,nssv1802021,nssv1802002,nssv1801972,nssv1801999,nssv1801962,nssv1801978,nssv1802024,nssv1801984,nssv1802020,nssv1801964,nssv1801024,nssv1802006,nssv1802025,nssv1801996,nssv1802027,nssv1801998,nssv1802026,nssv1802007,nssv1802019,nssv1802017,nssv1801957,nssv1801987,nssv1801966,nssv1801994,nssv1801019,nssv1802028,nssv1801963,nssv1802011,nssv1801965,nssv1802005,nssv1801988,nssv1801985,nssv1801986,nssv1802030,nssv1801979,nssv1802015,nssv1802031,nssv1801991,nssv1801017,nssv1801973,nssv1802010,nssv1801983,nssv1801980,nssv1802000,nssv1801997,nssv1802008,nssv1802009,nssv1801977,nssv1801967,nssv1802035,nssv1801982,nssv1801993,nssv1802013 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3370068 1 155952082 155952082 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824977 M 185 1 0 "" NA19240 esv7754 1 155978387 155980396 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30195 M 1 0 0 "" nsv946434 1 156003728 156004516 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802047,nssv1802090,nssv1802055,nssv1802101,nssv1802052,nssv1802129,nssv1802067,nssv1802098,nssv1802058,nssv1802079,nssv1802050,nssv1802064,nssv1802066,nssv1802134,nssv1802043,nssv1802095,nssv1802119,nssv1802130,nssv1802049,nssv1802133,nssv1802116,nssv1802065,nssv1802115,nssv1802077,nssv1802057,nssv1802092,nssv1802039,nssv1802110,nssv1802041,nssv1802086,nssv1802117,nssv1802073,nssv1802046,nssv1802111,nssv1802056,nssv1802093,nssv1802040,nssv1802100,nssv1802060,nssv1802089,nssv1802118,nssv1802068,nssv1802042,nssv1802131,nssv1802059,nssv1802096,nssv1802120,nssv1802087,nssv1802069,nssv1802072,nssv1802124,nssv1802109,nssv1802048,nssv1802083,nssv1802044,nssv1802099,nssv1802121,nssv1802125,nssv1802054,nssv1802126,nssv1802063,nssv1802061,nssv1802051,nssv1802103,nssv1802122,nssv1802104,nssv1802123,nssv1802081,nssv1802045,nssv1802114,nssv1802053,nssv1802071,nssv1802062,nssv1802075,nssv1802108,nssv1802085,nssv1802102,nssv1802091,nssv1802113,nssv1802084,nssv1802128,nssv1802107,nssv1802112,nssv1802127,nssv1802082,nssv1802097,nssv1802088,nssv1802105,nssv1802078,nssv1802080,nssv1802070,nssv1802038,nssv1802074,nssv1802076,nssv1802106,nssv1802094,nssv1802132 M 97 10 0 FCRL2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3371841 1 156048052 156049250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691994 M 185 1 0 FCRL1 NA19239 nsv508040 1 156152851 156158851 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624220 M 4 0 0 "" NA18994 esv2643866 1 156153154 156155041 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5310174 M 1 0 0 "" NA18507 nsv3165 1 156169198 156203278 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2569,nssv7729 M 9 2 0 "" NA12156,NA18555 esv2581143 1 156182736 156184082 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5297251 M 1 0 1 "" NA18507 esv2288722 1 156183023 156183729 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4639759 M 1 0 1 "" NA18507 esv2543006 1 156183218 156183534 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5300982 M 1 0 1 "" NA18507 esv2150735 1 156203978 156204417 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4593362 M 1 0 1 "" NA18507 nsv473341 1 156265163 156265163 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018014 M 9 1 0 KIRREL NA19129 nsv999542 1 156282339 156634756 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500337 M 29084 0 1 CD1A,CD1B,CD1C,CD1D,CD1E,KIRREL,LOC646268 dgv442n100 1 156282620 156332146 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005196,nsv1003592 M 29084 2 0 KIRREL esv3364099 1 156286775 156286775 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701357 M 185 1 0 KIRREL NA12878 nsv523208 1 156288841 156355311 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698928 M 2026 1 0 KIRREL nsv526592 1 156291123 156293163 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702911 M 2026 0 1 KIRREL esv5651 1 156308318 156309570 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv28092 M 1 0 0 KIRREL esv2956 1 156317236 156317892 CNV loss Wang_et_al_2008 18987735 Sequencing essv25397 M 1 0 1 KIRREL YH nsv476918 1 156365997 156365997 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011422 M 9 1 0 "" NA12878 nsv946435 1 156410786 156412257 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802155,nssv1802227,nssv1802141,nssv1802177,nssv1802142,nssv1802203,nssv1802140,nssv1802175,nssv1802157,nssv1802174,nssv1802218,nssv1802192,nssv1802149,nssv1802195,nssv1802137,nssv1802179,nssv1802147,nssv1802180,nssv1802215,nssv1802185,nssv1802163,nssv1802231,nssv1802216,nssv1802191,nssv1802146,nssv1802196,nssv1802213,nssv1802204,nssv1802212,nssv1802187,nssv1802154,nssv1802226,nssv1802136,nssv1802161,nssv1802164,nssv1802171,nssv1802160,nssv1802207,nssv1802143,nssv1802230,nssv1802144,nssv1802189,nssv1802153,nssv1802162,nssv1802152,nssv1802176,nssv1802139,nssv1802170,nssv1802156,nssv1802165,nssv1802150,nssv1802198,nssv1802138,nssv1802208,nssv1802148,nssv1802169,nssv1802166,nssv1802186,nssv1802221,nssv1802167,nssv1802214,nssv1802183,nssv1802145,nssv1802193,nssv1802151,nssv1802201,nssv1802217,nssv1802197,nssv1802219,nssv1802206,nssv1802220,nssv1802190,nssv1802159,nssv1802184,nssv1802228,nssv1802223,nssv1802158,nssv1802182,nssv1802211,nssv1802222,nssv1802178,nssv1802200,nssv1802194,nssv1802173,nssv1802205,nssv1802229,nssv1802199,nssv1802188,nssv1802172,nssv1802202,nssv1802225,nssv1802168,nssv1802209,nssv1802210,nssv1802181,nssv1802224,nssv1802135 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv25945 1 156425846 156480784 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13585 M 40 2 0 "" NA18505,NA18907 nsv508626 1 156428556 156508782 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622778 M 4 0 1 CD1A NA18994 nsv946437 1 156431309 156433155 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800253,nssv1800233,nssv1802238,nssv1802584,nssv1802239,nssv1802574,nssv1802245,nssv1800243,nssv1802241,nssv1802258,nssv1800249,nssv1802575,nssv1802249,nssv1800231,nssv1800248,nssv1800218,nssv1802242,nssv1800265,nssv1802243,nssv1800236,nssv1802257,nssv1800228,nssv1802234,nssv1802572,nssv1800255,nssv1802259,nssv1802247,nssv1800216,nssv1802244,nssv1800225,nssv1802246,nssv1800219,nssv1800251,nssv1800246,nssv1802250,nssv1800224,nssv1802237,nssv1800241,nssv1800247,nssv1800240,nssv1802254,nssv1802573,nssv1802568,nssv1800258,nssv1800252,nssv1802583,nssv1802251,nssv1800257,nssv1802252,nssv1800242,nssv1802240,nssv1800223,nssv1802233,nssv1802579,nssv1800254,nssv1800217,nssv1800250,nssv1802577,nssv1802235,nssv1800221,nssv1802236,nssv1800234,nssv1800256,nssv1802570,nssv1802253,nssv1802578,nssv1802569,nssv1800260,nssv1802571,nssv1800232,nssv1802248,nssv1800262,nssv1802256,nssv1800259,nssv1800220,nssv1802255,nssv1802582,nssv1800227,nssv1800235,nssv1800263,nssv1802576,nssv1800226,nssv1800264,nssv1800238,nssv1802580,nssv1800244,nssv1800215,nssv1800237,nssv1800229,nssv1800245,nssv1800230,nssv1800222,nssv1802581,nssv1800266,nssv1800239,nssv1800261,nssv1802232 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv527619 1 156435187 156437170 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704085 M 2026 0 1 "" nsv831692 1 156490083 156658640 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450862,nssv1450851 M 95 2 0 CD1A,CD1B,CD1C,CD1E,OR10K2,OR10T2 nsv515666 1 156491449 156503686 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv659323,nssv660921,nssv665215,nssv664298 M 2026 0 4 CD1A nsv946438 1 156502350 156502850 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800277,nssv1800363,nssv1800296,nssv1800327,nssv1800284,nssv1800290,nssv1800348,nssv1800315,nssv1800269,nssv1800332,nssv1800345,nssv1800319,nssv1800276,nssv1800340,nssv1800292,nssv1800324,nssv1800286,nssv1800300,nssv1800272,nssv1800306,nssv1800346,nssv1800328,nssv1800283,nssv1800322,nssv1800344,nssv1800325,nssv1800274,nssv1800267,nssv1800273,nssv1800321,nssv1800268,nssv1800304,nssv1800289,nssv1800362,nssv1800275,nssv1800355,nssv1800349,nssv1800333,nssv1800285,nssv1800305,nssv1800295,nssv1800316,nssv1800270,nssv1800343,nssv1800347,nssv1800337,nssv1800288,nssv1800360,nssv1800287,nssv1800354,nssv1800271,nssv1800338,nssv1800280,nssv1800310,nssv1800351,nssv1800301,nssv1800353,nssv1800293,nssv1800279,nssv1800330,nssv1800278,nssv1800307,nssv1800281,nssv1800303,nssv1800298,nssv1800294,nssv1800350,nssv1800314,nssv1800352,nssv1800356,nssv1800291,nssv1800339,nssv1800282,nssv1800313,nssv1800318,nssv1800311,nssv1800357,nssv1800329,nssv1800297,nssv1800299,nssv1800331,nssv1800302,nssv1800358,nssv1800359,nssv1800361,nssv1800323,nssv1800320,nssv1800326,nssv1800308,nssv1800317,nssv1800335,nssv1800341,nssv1800336,nssv1800312,nssv1800342,nssv1800334,nssv1800309 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv523252 1 156561633 156562253 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698981 M 2026 0 1 "" nsv946439 1 156565771 156566271 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1800375,nssv1801375,nssv1800392,nssv1800406,nssv1800381,nssv1801376,nssv1801373,nssv1801360,nssv1800393,nssv1800397,nssv1800379,nssv1801347,nssv1800369,nssv1800409,nssv1800383,nssv1800396,nssv1800366,nssv1801343,nssv1801369,nssv1800398,nssv1800380,nssv1800387,nssv1801372,nssv1801354,nssv1801365,nssv1801364,nssv1800371,nssv1801338,nssv1800373,nssv1800405,nssv1800374,nssv1801357,nssv1800389,nssv1801362,nssv1800372,nssv1801358,nssv1801366,nssv1801344,nssv1800384,nssv1801340,nssv1800382,nssv1801382,nssv1801367,nssv1800401,nssv1800395,nssv1800364,nssv1800386,nssv1801355,nssv1800385,nssv1801378,nssv1801371,nssv1801359,nssv1800368,nssv1801336,nssv1800367,nssv1801380,nssv1801368,nssv1801345,nssv1800377,nssv1800403,nssv1801370,nssv1801356,nssv1801374,nssv1800407,nssv1800370,nssv1800399,nssv1800365,nssv1801379,nssv1800376,nssv1801383,nssv1800378,nssv1800402,nssv1800388,nssv1801337,nssv1801381,nssv1801351,nssv1800404,nssv1801342,nssv1801339,nssv1800390,nssv1801363,nssv1800410,nssv1800391,nssv1801350,nssv1801384,nssv1801341,nssv1801352,nssv1801353,nssv1800394,nssv1800408,nssv1801361,nssv1800400,nssv1801349,nssv1801346,nssv1800411,nssv1801377,nssv1801348 M 97 10 0 CD1B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1010608 1 156589439 156620089 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490330 M 29084 0 1 CD1E nsv946440 1 156690747 156696252 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1801399,nssv1801444,nssv1801402,nssv1801472,nssv1801464,nssv1801442,nssv1801397,nssv1801445,nssv1801413,nssv1801426,nssv1801410,nssv1801431,nssv1801404,nssv1801474,nssv1801388,nssv1801461,nssv1801390,nssv1801473,nssv1801386,nssv1801457,nssv1801462,nssv1801446,nssv1801395,nssv1801440,nssv1801391,nssv1801453,nssv1801393,nssv1801459,nssv1801469,nssv1801451,nssv1801401,nssv1801455,nssv1801400,nssv1801454,nssv1801403,nssv1801430,nssv1801465,nssv1801432,nssv1801414,nssv1801456,nssv1801389,nssv1801415,nssv1801406,nssv1801437,nssv1801405,nssv1801441,nssv1801463,nssv1801419,nssv1801394,nssv1801427,nssv1801387,nssv1801435,nssv1801471,nssv1801433,nssv1801467,nssv1801411,nssv1801416,nssv1801425,nssv1801392,nssv1801477,nssv1801470,nssv1801452,nssv1801396,nssv1801475,nssv1801468,nssv1801443,nssv1801466,nssv1801429,nssv1801407,nssv1801479,nssv1801398,nssv1801420,nssv1801409,nssv1801408,nssv1801412,nssv1801434,nssv1801424,nssv1801476,nssv1801480,nssv1801460,nssv1801481,nssv1801428,nssv1801447,nssv1801423,nssv1801478,nssv1801422,nssv1801439,nssv1801417,nssv1801436,nssv1801418,nssv1801385,nssv1801448,nssv1801449,nssv1801458,nssv1801421,nssv1801450,nssv1801438 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1173677 1 156710197 156710197 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4261673 M 2 1 0 "" HuRef esv3379742 1 156722914 156722933 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596468 M 185 1 0 "" NA12815 esv3304360 1 156722926 156722927 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7775940,essv7801213,essv7773628,essv7821692,essv7797449,essv7770818,essv7774371,essv7802744,essv7804988,essv7799109 M 185 10 0 "" NA07037,NA07357,NA11931,NA11992,NA12003,NA12004,NA12155,NA12717,NA12812,NA12815 esv3441168 1 156722932 156722948 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901424,essv8901429,essv8901427,essv8901426,essv8901430,essv8901423,essv8901431,essv8901428 M 185 8 0 "" NA07037,NA07357,NA11931,NA11992,NA12003,NA12004,NA12155,NA12717 nsv1001046 1 156728187 156769962 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486121 M 29084 0 1 "" nsv470743 1 156750909 156788016 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547783 M 443 0 1 OR6Y1 HGDP00984 nsv437202 1 156751002 156759778 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467083 M 60 0 1 "" NA10835 esv2438576 1 156754484 156755995 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5259738 M 1 0 1 "" NA18507 nsv438070 1 156756569 156757075 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469252,nssv469263 M 269 0 2 "" NA10835,NA12249 nsv515658 1 156756569 156757075 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv657910,nssv666360,nssv670626,nssv671739,nssv690975,nssv672124,nssv664271,nssv676710 M 2026 0 8 "" nsv547982 1 156756569 156778069 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv725008 M 17421 0 1 "" nsv946441 1 156760268 156772133 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1801494,nssv1801552,nssv1801511,nssv1801540,nssv1801496,nssv1801534,nssv1801499,nssv1801546,nssv1801561,nssv1801525,nssv1801510,nssv1801520,nssv1801507,nssv1801570,nssv1801563,nssv1801535,nssv1801490,nssv1801558,nssv1801485,nssv1801541,nssv1801559,nssv1801571,nssv1801487,nssv1801528,nssv1801483,nssv1801515,nssv1801501,nssv1801518,nssv1801566,nssv1801505,nssv1801491,nssv1801542,nssv1801497,nssv1801537,nssv1801500,nssv1801548,nssv1801493,nssv1801554,nssv1801562,nssv1801543,nssv1801486,nssv1801527,nssv1801560,nssv1801517,nssv1801488,nssv1801569,nssv1801503,nssv1801550,nssv1801495,nssv1801575,nssv1801498,nssv1801556,nssv1801568,nssv1801551,nssv1801492,nssv1801526,nssv1801564,nssv1801538,nssv1801502,nssv1801524,nssv1801484,nssv1801572,nssv1801489,nssv1801523,nssv1801513,nssv1801508,nssv1801567,nssv1801532,nssv1801565,nssv1801482,nssv1801506,nssv1801573,nssv1801504,nssv1801549,nssv1801522,nssv1801516,nssv1801576,nssv1801553,nssv1801557,nssv1801529,nssv1801509,nssv1801512,nssv1801544,nssv1801530,nssv1801539,nssv1801521,nssv1801547,nssv1801574,nssv1801577,nssv1801531,nssv1801514,nssv1801533,nssv1801519,nssv1801578,nssv1801536,nssv1801555,nssv1801545 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv547983 1 156762088 156790295 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173210 M 17421 0 1 OR6Y1 HGDP01088 dgv15n17 1 156778069 156791060 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437248,nsv437249,nsv437250 M 60 0 3 OR6Y1 NA19103,NA19202,NA19208 esv2764188 1 156779672 156794148 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006592,essv7006563,essv7006553,essv7006573,essv7006590,essv7006566,essv7006588,essv7006555,essv7006587,essv7006554,essv7006564,essv7006579,essv7006559,essv7006548,essv7006597,essv7006585,essv7006580,essv7006551,essv7006549,essv7006552,essv7006569,essv7006576,essv7006591,essv7006543,essv7006561,essv7006560,essv7006596,essv7006584,essv7006557,essv7006582,essv7006581,essv7006574,essv7006544,essv7006550,essv7006595,essv7006558,essv7006565,essv7006593,essv7006547,essv7006594,essv7006571,essv7006583,essv7006572,essv7006586,essv7006575,essv7006577,essv7006562,essv7006542,essv7006568,essv7006570,essv7006546 M 1109 0 51 OR6Y1 RW_0002,RW_0004,RW_0014,RW_0017,RW_0033,RW_0038,RW_0039,RW_0056,RW_0061,RW_0074,RW_0092,RW_0101,RW_0107,RW_0116,RW_0122,RW_0124,RW_0175,RW_0193,RW_0196,RW_0204,RW_0220,RW_0226,RW_0228,RW_0243,RW_0252,RW_0275,RW_0289,RW_0296,RW_0297,RW_0302,RW_0304,RW_0310,RW_0316,RW_0330,RW_0333,RW_0335,RW_0349,RW_0508,RW_0536,RW_0548,RW_0551,RW_0560,RW_0564,RW_0566,RW_0568,RW_0577,RW_0602,RW_0614,RW_0618,RW_0667,RW_0669 dgv443n100 1 156781505 156793196 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005658,nsv998666 M 29084 0 2 OR6Y1 esv2422163 1 156783460 156788016 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5018855,essv5086950,essv5040528,essv5095377,essv5117946,essv5058576,essv5058259,essv5097070,essv5159882,essv5143700,essv5070805,essv5133813,essv5114303,essv5158882,essv5075946,essv5125285,essv5008463,essv5077180,essv5005794,essv5049654,essv5062201,essv5158063,essv5032694,essv5128956,essv5040632,essv5085056,essv5072203,essv5008493,essv5051342,essv5041622,essv5143434,essv5065861,essv5080721,essv5160461 M 1184 0 34 OR6Y1 NA18870,NA19035,NA19036,NA19095,NA19097,NA19098,NA19102,NA19103,NA19201,NA19202,NA19207,NA19208,NA19317,NA19324,NA19350,NA19360,NA19374,NA19385,NA19393,NA19397,NA19399,NA19429,NA19443,NA19469,NA19470,NA19473,NA21339,NA21370,NA21402,NA21405,NA21522,NA21719,NA21738,NA21739 dgv444n100 1 156783608 156812047 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1015106,nsv1013656 M 29084 6 0 OR6P1,OR6Y1 nsv442095 1 156783620 156787041 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1618694,nssv1618696,nssv1618699,nssv1618700,nssv1618695,nssv1618693,nssv1618698,nssv1618697,nssv1618692 M 270 0 9 OR6Y1 NA18870,NA19098,NA19100,NA19102,NA19103,NA19201,NA19202,NA19207,NA19208 dgv40n27 1 156783977 156788016 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv464128,nsv464117 M 1557 0 2 OR6Y1 HGDP00467,HGDP00479 nsv515774 1 156783977 156788016 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv665816,nssv653320,nssv687858,nssv688513,nssv693812,nssv677418,nssv666508,nssv665854,nssv662523,nssv667134,nssv661057,nssv658814,nssv673767,nssv658359,nssv689056,nssv669489,nssv675221,nssv681388,nssv691244,nssv690060,nssv673173,nssv682898,nssv668037,nssv686592,nssv686215,nssv670410,nssv665984,nssv653201,nssv688038,nssv673661,nssv652086,nssv658243,nssv657291,nssv656382,nssv685281,nssv684385,nssv668164,nssv662802,nssv657961,nssv690472,nssv657768 M 2026 0 41 OR6Y1 nsv547984 1 156783977 156788016 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173211,nssv1173212 M 17421 0 2 OR6Y1 HGDP00467,HGDP00479 nsv464139 1 156786829 156787658 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540112 M 1557 0 1 "" HGDP00914 nsv547985 1 156786829 156787658 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173213 M 17421 0 1 "" HGDP00914 nsv547986 1 156786829 156823463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv725009 M 17421 0 1 OR10X1,OR6P1 nsv438082 1 156787361 156788016 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469285,nssv469274,nssv469308,nssv469297 M 269 0 4 "" NA19102,NA19103,NA19207,NA19208 esv9069 1 156895729 156896593 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31510 M 1 0 0 SPTA1 esv1958503 1 156895813 156896530 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4821775 M 1 0 1 SPTA1 NA18507 esv1284753 1 156896011 156896339 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3882204 M 2 0 1 SPTA1 HuRef dgv445n100 1 156926688 156963442 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003179,nsv998605 M 29084 2 0 OR6K2,OR6K3 nsv547987 1 156931596 156986812 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv725010 M 17421 0 1 OR6K2,OR6K3 dgv589n54 1 156951660 157119577 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547989,nsv547988 M 17421 0 2 MNDA,OR6K3,OR6K6,OR6N1,OR6N2 esv2764266 1 156967356 156992504 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006602,essv7006605,essv7006603,essv7006601,essv7006599,essv7006604,essv7006598 M 1109 0 7 OR6K6 RW_0093,RW_0113,RW_0214,RW_0218,RW_0262,RW_0353,RW_0550 esv2630644 1 156978149 156979604 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5223071 M 1 0 1 "" NA18507 esv7992 1 156978424 156979237 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30433 M 1 0 0 "" esv1944482 1 156978465 156979168 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4690652 M 1 0 1 "" NA18507 esv3737 1 156978570 156979101 CNV loss Wang_et_al_2008 18987735 Sequencing essv26178 M 1 0 1 "" YH esv1000674 1 156978655 156978976 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580439 M 3 0 1 "" HuRef nsv1002401 1 156979251 157238655 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704744 M 29084 0 1 MNDA,OR6K6,OR6N1,OR6N2,PYHIN1 dgv590n54 1 156981912 156983545 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547991,nsv547990 M 17421 0 5 "" nsv547992 1 156981912 156984233 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv725018 M 17421 0 1 "" dgv591n54 1 156981912 156995970 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547995,nsv547994,nsv547993 M 17421 0 4 OR6K6 esv27656 1 156981920 156984277 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18404 M 40 2 0 "" NA12878,NA15510 esv2562592 1 156991942 156992893 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5364410 M 1 1 0 OR6K6 NA18507 dgv592n54 1 156991969 156994567 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv547999,nsv547996,nsv547998,nsv547997 M 17421 0 10 OR6K6 nsv824920 1 156992701 156994749 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423154,nssv1435681,nssv1428847,nssv1437247,nssv1433447,nssv1430375 M 31 0 6 "" AK12,AK16,NA18526,NA18566,NA18949,NA18999 nsv821493 1 156992934 156994749 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420669 M 1 0 1 "" NA10851 dgv81n67 1 156993085 156994749 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv824964,nsv824942,nsv824931 M 31 7 0 "" AK14,AK2,AK6,NA18547,NA18570,NA18942,NA18951 nsv820010 1 156993464 156994771 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419233 M 2 1 0 "" AK1 esv29669 1 156993484 156994714 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13400 M 40 26 0 "" NA06985,NA11993,NA12006,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18505,NA18508,NA18511,NA18517,NA18523,NA18907,NA18909,NA18916,NA19099,NA19108,NA19129,NA19147,NA19225,NA19240 nsv824953 1 156993544 156994596 CNV gain+loss Park_et_al_2010 20364138 Oligo aCGH nssv1422393,nssv1423741,nssv1440841,nssv1424324,nssv1438609,nssv1425532,nssv1428055,nssv1439483,nssv1436360,nssv1423983,nssv1440152 M 31 10 1 "" AK10,AK4,NA18537,NA18542,NA18552,NA18564,NA18582,NA18947,NA18968,NA18969,NA18973 dgv593n54 1 156993649 156994373 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548008,nsv548001,nsv548000 M 17421 0 6 "" dgv594n54 1 156993649 156994567 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548003,nsv548013,nsv548014,nsv548004,nsv548011,nsv548002,nsv548010,nsv548009 M 17421 0 216 "" dgv595n54 1 156993649 156996337 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548012,nsv548006,nsv548005,nsv548015,nsv548018 M 17421 0 8 "" dgv596n54 1 156993649 156997531 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548016,nsv548007 M 17421 0 2 "" dgv597n54 1 156993935 156994567 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548019,nsv548017 M 17421 0 6 "" nsv824975 1 157002656 157003277 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423155 M 31 0 1 OR6N1 NA18999 nsv997861 1 157002839 157021285 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485649 M 29084 0 1 OR6N1,OR6N2 esv1967217 1 157118113 157118558 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4774992 M 1 0 1 "" NA18507 nsv511151 1 157122178 157138077 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626010 M 1 0 1 "" 1 nsv511717 1 157133715 157137040 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626359 M 1 0 1 "" 1 esv2617713 1 157133820 157137517 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5387227 M 1 0 1 "" NA18507 esv7681 1 157133925 157136752 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30122 M 1 0 0 "" esv4799 1 157133963 157136708 CNV loss Wang_et_al_2008 18987735 Sequencing essv27240 M 1 0 1 "" YH esv1977143 1 157133971 157136754 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4588848 M 1 0 1 "" NA18507 nsv820273 1 157134135 157136615 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419433 M 2 0 1 "" AK1 esv26034 1 157134152 157136674 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11969 M 40 3 16 "" NA07045,NA11931,NA11993,NA12004,NA12006,NA12287,NA12489,NA12878,NA15510,NA18502,NA18508,NA18523,NA18861,NA18907,NA18909,NA18916,NA19108,NA19114,NA19190 nsv821093 1 157134152 157137488 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420680 M 1 0 1 "" NA10851 nsv498691 1 157134154 157136609 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585405 M 9 0 1 "" dgv4n6 1 157134155 157136608 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159081,nsv159728 M 24 "" dgv82n67 1 157134340 157136581 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824997,nsv824986 M 31 0 30 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 dgv598n54 1 157134426 157136544 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548027,nsv548020,nsv548021 M 17421 19 0 "" nsv548022 1 157134426 157136544 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv726441,nssv726024,nssv725598,nssv726155,nssv725633,nssv725562,nssv725909,nssv725648,nssv726393,nssv725843,nssv725541,nssv726030,nssv725973,nssv725968,nssv726156,nssv725634,nssv725728,nssv726385,nssv726159,nssv726253,nssv725469,nssv725846,nssv725470,nssv725881,nssv725450,nssv726473,nssv726048,nssv725719,nssv725417,nssv726035,nssv725713,nssv725887,nssv725528,nssv726472,nssv725535,nssv726467,nssv726466,nssv726103,nssv725903,nssv725878,nssv725580,nssv725480,nssv725485,nssv725865,nssv725351,nssv726040,nssv725917,nssv725430,nssv725712,nssv726036,nssv725558,nssv725932,nssv726047,nssv725561,nssv726039,nssv725902,nssv725557,nssv725352,nssv726038,nssv726037,nssv725556,nssv725433,nssv725559,nssv725674,nssv726046,nssv725356,nssv725842,nssv726043,nssv725560,nssv725413,nssv726042,nssv725762,nssv725841,nssv726041,nssv725901,nssv725900,nssv726045,nssv726044,nssv725855,nssv726057,nssv725714,nssv725573,nssv725908,nssv726158,nssv726077,nssv725429,nssv725906,nssv725844,nssv725969,nssv725972,nssv725904,nssv726049,nssv726050,nssv725877,nssv725845,nssv725355,nssv725572,nssv726056,nssv725718,nssv726389,nssv726053,nssv726051,nssv726052,nssv725905,nssv725527,nssv726055,nssv725353,nssv725498,nssv725438,nssv726054,nssv726062,nssv726061,nssv725497,nssv726058,nssv725565,nssv725518,nssv725448,nssv725876,nssv725971,nssv726060,nssv725563,nssv725526,nssv725715,nssv725571,nssv726063,nssv725717,nssv725564,nssv726059,nssv725566,nssv725970,nssv725907,nssv725449,nssv725447,nssv725716,nssv725487,nssv725354,nssv725569,nssv725570,nssv725567,nssv725363,nssv725568,nssv725376,nssv725912,nssv725579,nssv725720,nssv726166,nssv725534,nssv725472,nssv725879,nssv726023,nssv725980,nssv726076,nssv725454,nssv725432,nssv726068,nssv725849,nssv725357,nssv726471,nssv725974,nssv726384,nssv725632,nssv726388,nssv726180,nssv725503,nssv726165,nssv725910,nssv725517,nssv725362,nssv726160,nssv725911,nssv725880,nssv725482,nssv725639,nssv725631,nssv726164,nssv725529,nssv725629,nssv725523,nssv725574,nssv726163,nssv726162,nssv726161,nssv725431,nssv725913,nssv726175,nssv725416,nssv726067,nssv726064,nssv726174,nssv725473,nssv725504,nssv726169,nssv726168,nssv726167,nssv725630,nssv725979,nssv726171,nssv725462,nssv725638,nssv725637,nssv725415,nssv726173,nssv725854,nssv726066,nssv725916,nssv726170,nssv725468,nssv725635,nssv726172,nssv725848,nssv725914,nssv725847,nssv725727,nssv726065,nssv725636,nssv725647,nssv725414,nssv726387,nssv726383,nssv726072,nssv726022,nssv726179,nssv726177,nssv725996,nssv726178,nssv726176,nssv725915,nssv725853,nssv725722,nssv725484,nssv725726,nssv726075,nssv725575,nssv725721,nssv725975,nssv725976,nssv726392,nssv726071,nssv726070,nssv725533,nssv726470,nssv726069,nssv725978,nssv725502,nssv725646,nssv725530,nssv725467,nssv725361,nssv725977,nssv725466,nssv725499,nssv725531,nssv725577,nssv725852,nssv725641,nssv726181,nssv725360,nssv725576,nssv726359,nssv725645,nssv726074,nssv725532,nssv726386,nssv725578,nssv725501,nssv726391,nssv725640,nssv725464,nssv725644,nssv725500,nssv725725,nssv725359,nssv726284,nssv726360,nssv725724,nssv726390,nssv726231,nssv725358,nssv726073,nssv725850,nssv725723,nssv725851,nssv725642,nssv726265,nssv725643,nssv725730,nssv726413,nssv726464,nssv726395,nssv726259,nssv726399,nssv725732,nssv725537,nssv725983,nssv725486,nssv726394,nssv725453,nssv725536,nssv725597,nssv725995,nssv725420,nssv726283,nssv726188,nssv725585,nssv725582,nssv725365,nssv726079,nssv726157,nssv725650,nssv725581,nssv725588,nssv726463,nssv725918,nssv726027,nssv726203,nssv726093,nssv726078,nssv726423,nssv725729,nssv725673,nssv725421,nssv726083,nssv726080,nssv725437,nssv725452,nssv725540,nssv726414,nssv725657,nssv726029,nssv725474,nssv726184,nssv726081,nssv725584,nssv726082,nssv726182,nssv725520,nssv726183,nssv725987,nssv725748,nssv726398,nssv726187,nssv725435,nssv725982,nssv725731,nssv726396,nssv726465,nssv725886,nssv726397,nssv726186,nssv725364,nssv725981,nssv725864,nssv725649,nssv725922,nssv725583,nssv726185,nssv725505,nssv725931,nssv725921,nssv725367,nssv726092,nssv725587,nssv726405,nssv726404,nssv725920,nssv725471,nssv726198,nssv726084,nssv726026,nssv725653,nssv726089,nssv726085,nssv725856,nssv725985,nssv726190,nssv726193,nssv726415,nssv725586,nssv726189,nssv725656,nssv726422,nssv725434,nssv726192,nssv726191,nssv726196,nssv725738,nssv726087,nssv725734,nssv726412,nssv725984,nssv725747,nssv726403,nssv726402,nssv726088,nssv726197,nssv725737,nssv726086,nssv726195,nssv726194,nssv725652,nssv725733,nssv725651,nssv725736,nssv726401,nssv725857,nssv725735,nssv726252,nssv725761,nssv726400,nssv725919,nssv725366,nssv725463,nssv725418,nssv726202,nssv726025,nssv726406,nssv725746,nssv725739,nssv726421,nssv726091,nssv726090,nssv725654,nssv725655,nssv725986,nssv725740,nssv726411,nssv726201,nssv726409,nssv725375,nssv726410,nssv726420,nssv725451,nssv725745,nssv725419,nssv726419,nssv725744,nssv725743,nssv726408,nssv726416,nssv725741,nssv725742,nssv726200,nssv725368,nssv726418,nssv726417,nssv726199,nssv725863,nssv725665,nssv725994,nssv726460,nssv725760,nssv726438,nssv725539,nssv725883,nssv725479,nssv725659,nssv726101,nssv725481,nssv726461,nssv725930,nssv726028,nssv726432,nssv725923,nssv725658,nssv725369,nssv725885,nssv726426,nssv726439,nssv725519,nssv726427,nssv726207,nssv726206,nssv725925,nssv726102,nssv725436,nssv726251,nssv726220,nssv726205,nssv726262,nssv725756,nssv726425,nssv725596,nssv725859,nssv726462,nssv726424,nssv725506,nssv726407,nssv725590,nssv726264,nssv726204,nssv726212,nssv725589,nssv726219,nssv726428,nssv726257,nssv726436,nssv726437,nssv726094,nssv725882,nssv725989,nssv725749,nssv725672,nssv726096,nssv726211,nssv726431,nssv725755,nssv725664,nssv726210,nssv725507,nssv726209,nssv726208,nssv725750,nssv726218,nssv726435,nssv726429,nssv725988,nssv725754,nssv725663,nssv725858,nssv726434,nssv725924,nssv726095,nssv726430,nssv725753,nssv725662,nssv725751,nssv726433,nssv726216,nssv726217,nssv725661,nssv726214,nssv726213,nssv726215,nssv725752,nssv725660,nssv726097,nssv725671,nssv726443,nssv725373,nssv725926,nssv725993,nssv726446,nssv725538,nssv725371,nssv726256,nssv726224,nssv725862,nssv726222,nssv726100,nssv726457,nssv726459,nssv725516,nssv726447,nssv726458,nssv726221,nssv725759,nssv726444,nssv726440,nssv725860,nssv725666,nssv725884,nssv726223,nssv726445,nssv726442,nssv725667,nssv726281,nssv725591,nssv725370,nssv726250,nssv725595,nssv725592,nssv725475,nssv725992,nssv725928,nssv726098,nssv725477,nssv726255,nssv726454,nssv726226,nssv726455,nssv726448,nssv726099,nssv725372,nssv726456,nssv726249,nssv725594,nssv725476,nssv726258,nssv726225,nssv725478,nssv725374,nssv726227,nssv726452,nssv726254,nssv725758,nssv726248,nssv725670,nssv725757,nssv725927,nssv726449,nssv726453,nssv726228,nssv725991,nssv725669,nssv725929,nssv725990,nssv726450,nssv726451,nssv725861,nssv726230,nssv725593,nssv726247,nssv725668,nssv726229,nssv726498,nssv726110,nssv726306,nssv726477,nssv725998,nssv725555,nssv725455,nssv726358,nssv726032,nssv726478,nssv725935,nssv726112,nssv726021,nssv726309,nssv726236,nssv725446,nssv725704,nssv725381,nssv726034,nssv726483,nssv726482,nssv726497,nssv726033,nssv725764,nssv726104,nssv726301,nssv726246,nssv726107,nssv725840,nssv725547,nssv726278,nssv726291,nssv726154,nssv726106,nssv725948,nssv725888,nssv726266,nssv726105,nssv726267,nssv725543,nssv726263,nssv725693,nssv726260,nssv725676,nssv726261,nssv725491,nssv725524,nssv726290,nssv725599,nssv725439,nssv725441,nssv725601,nssv725892,nssv726480,nssv725675,nssv726271,nssv725600,nssv726108,nssv726270,nssv725378,nssv725763,nssv725465,nssv726277,nssv725512,nssv726269,nssv726004,nssv726476,nssv726481,nssv726382,nssv726109,nssv726268,nssv726475,nssv725711,nssv725377,nssv726272,nssv726273,nssv725940,nssv725934,nssv726276,nssv725899,nssv726479,nssv726288,nssv725933,nssv725628,nssv725610,nssv726469,nssv725605,nssv725350,nssv726474,nssv726287,nssv726286,nssv726285,nssv726289,nssv725542,nssv725967,nssv725768,nssv726298,nssv725602,nssv725936,nssv726495,nssv726496,nssv726111,nssv726031,nssv725679,nssv725939,nssv725689,nssv725496,nssv726293,nssv726126,nssv725875,nssv726487,nssv726292,nssv725457,nssv726300,nssv726486,nssv726305,nssv726489,nssv726294,nssv725796,nssv725766,nssv725677,nssv725869,nssv725380,nssv726485,nssv726488,nssv725678,nssv726327,nssv725773,nssv725765,nssv726297,nssv726484,nssv725767,nssv726296,nssv726295,nssv725604,nssv725525,nssv726304,nssv725997,nssv725684,nssv726493,nssv725428,nssv725422,nssv726494,nssv725938,nssv725688,nssv726299,nssv725685,nssv725937,nssv725774,nssv725687,nssv725680,nssv725772,nssv726303,nssv726492,nssv725771,nssv725603,nssv725391,nssv725770,nssv725686,nssv726302,nssv725769,nssv725683,nssv725681,nssv725682,nssv725379,nssv726490,nssv726491,nssv726307,nssv726279,nssv725866,nssv725891,nssv726113,nssv725383,nssv725546,nssv725944,nssv725692,nssv725779,nssv725776,nssv726500,nssv725947,nssv725703,nssv725696,nssv726116,nssv725412,nssv725775,nssv725607,nssv726003,nssv725795,nssv725385,nssv725522,nssv725691,nssv725461,nssv725868,nssv726234,nssv726235,nssv725382,nssv725490,nssv726308,nssv725778,nssv725943,nssv726125,nssv725440,nssv725777,nssv726233,nssv726499,nssv726115,nssv726310,nssv725609,nssv726326,nssv726314,nssv725606,nssv726311,nssv726312,nssv726313,nssv725695,nssv725509,nssv725384,nssv725690,nssv725456,nssv726317,nssv726318,nssv725508,nssv726316,nssv725942,nssv726232,nssv725941,nssv726114,nssv726315,nssv725694,nssv726002,nssv725489,nssv725780,nssv725545,nssv726319,nssv725510,nssv726321,nssv726118,nssv726124,nssv725999,nssv725699,nssv726117,nssv725390,nssv726275,nssv725702,nssv726119,nssv725781,nssv725946,nssv725784,nssv725698,nssv725697,nssv725783,nssv725785,nssv725608,nssv725782,nssv726325,nssv726320,nssv725388,nssv726123,nssv725790,nssv725890,nssv725389,nssv725794,nssv726001,nssv725793,nssv725701,nssv725488,nssv726274,nssv725945,nssv725867,nssv725889,nssv725789,nssv725786,nssv726120,nssv725788,nssv725787,nssv725700,nssv725544,nssv725511,nssv726121,nssv726122,nssv726000,nssv725792,nssv726324,nssv725386,nssv725791,nssv725483,nssv726322,nssv725387,nssv726323,nssv725893,nssv725614,nssv726353,nssv725895,nssv726008,nssv725966,nssv725871,nssv725800,nssv725554,nssv725514,nssv726011,nssv726137,nssv726130,nssv725839,nssv725874,nssv726328,nssv726020,nssv725521,nssv726127,nssv725549,nssv725709,nssv725291,nssv725612,nssv725710,nssv725424,nssv726336,nssv725956,nssv725290,nssv726333,nssv726338,nssv726129,nssv725294,nssv725289,nssv725295,nssv725611,nssv726128,nssv725898,nssv725705,nssv725292,nssv725445,nssv726134,nssv725293,nssv726280,nssv726282,nssv726237,nssv725492,nssv725443,nssv726468,nssv726331,nssv726007,nssv725299,nssv726330,nssv725396,nssv725298,nssv726131,nssv726006,nssv725797,nssv726335,nssv726005,nssv726329,nssv726381,nssv726332,nssv725323,nssv725814,nssv726133,nssv725627,nssv725297,nssv725798,nssv726334,nssv726132,nssv725296,nssv725799,nssv725613,nssv725617,nssv726339,nssv726337,nssv725393,nssv725303,nssv726344,nssv725310,nssv725411,nssv725708,nssv726153,nssv725322,nssv726010,nssv725804,nssv725950,nssv726357,nssv725460,nssv725955,nssv725707,nssv725395,nssv725301,nssv725302,nssv725300,nssv725894,nssv725803,nssv725949,nssv725349,nssv725304,nssv725802,nssv725305,nssv725309,nssv725706,nssv725306,nssv725801,nssv725308,nssv725495,nssv726343,nssv726342,nssv725616,nssv725458,nssv725392,nssv725548,nssv725307,nssv726341,nssv726340,nssv725311,nssv725459,nssv726135,nssv725615,nssv725954,nssv725807,nssv725513,nssv725423,nssv725813,nssv725315,nssv726346,nssv725812,nssv725314,nssv725312,nssv725806,nssv726352,nssv725313,nssv726345,nssv726136,nssv725394,nssv726009,nssv725805,nssv726351,nssv725320,nssv725951,nssv726347,nssv725809,nssv725953,nssv725808,nssv725811,nssv725870,nssv725442,nssv725316,nssv725810,nssv725952,nssv725318,nssv725317,nssv725319,nssv725427,nssv726348,nssv726350,nssv725321,nssv726349,nssv725426,nssv725336,nssv725965,nssv726019,nssv725960,nssv725622,nssv725324,nssv726013,nssv725401,nssv725626,nssv725330,nssv725325,nssv725619,nssv725897,nssv725327,nssv725817,nssv725618,nssv726138,nssv726380,nssv726144,nssv726139,nssv725896,nssv726142,nssv726147,nssv725816,nssv726140,nssv725515,nssv726141,nssv725326,nssv725348,nssv725551,nssv725329,nssv725822,nssv726239,nssv725553,nssv725328,nssv725815,nssv726356,nssv726366,nssv726355,nssv726143,nssv726152,nssv725957,nssv725331,nssv726146,nssv725821,nssv725959,nssv726012,nssv725620,nssv725818,nssv725425,nssv726245,nssv725550,nssv725621,nssv725397,nssv726354,nssv725873,nssv726238,nssv725398,nssv726365,nssv725335,nssv725334,nssv725958,nssv725399,nssv725400,nssv726145,nssv725332,nssv725410,nssv726364,nssv725820,nssv725333,nssv725819,nssv726363,nssv726362,nssv726361,nssv726244,nssv726151,nssv725824,nssv725962,nssv725409,nssv726014,nssv726372,nssv725624,nssv726240,nssv726150,nssv726148,nssv726018,nssv725823,nssv725342,nssv725625,nssv725964,nssv725405,nssv725337,nssv725825,nssv725347,nssv725837,nssv725828,nssv725961,nssv726149,nssv725402,nssv725623,nssv725827,nssv725341,nssv725403,nssv726379,nssv725338,nssv726370,nssv725826,nssv726367,nssv725872,nssv725552,nssv726371,nssv725340,nssv725404,nssv726368,nssv726369,nssv725339,nssv725829,nssv726378,nssv725344,nssv726017,nssv725838,nssv726242,nssv725493,nssv725343,nssv725963,nssv725444,nssv725346,nssv725494,nssv725833,nssv725836,nssv726016,nssv725830,nssv726373,nssv725408,nssv725835,nssv725407,nssv726243,nssv725345,nssv726377,nssv725832,nssv726241,nssv725831,nssv725406,nssv726015,nssv726376,nssv725834,nssv726374,nssv726375 M 17421 72 1140 "" nsv548023 1 157134426 157139835 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv726501 M 17421 1 0 "" nsv548024 1 157134426 157142033 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv726503,nssv726502 M 17421 0 2 "" dgv599n54 1 157134426 157149140 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548026,nsv548025 M 17421 0 4 "" nsv514013 1 157134544 157136576 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2851207,nssv2851298,nssv2851308,nssv2851266,nssv2851337,nssv2851355,nssv2851224,nssv2851411,nssv2851170,nssv2851285,nssv2851321,nssv2851293,nssv2851165,nssv2851378,nssv2851194,nssv2851279,nssv2851299,nssv2851196,nssv2851390,nssv2851220,nssv2851163,nssv2851387,nssv2851338,nssv2851225,nssv2851372,nssv2851176,nssv2851195,nssv2851394,nssv2851178,nssv2851300,nssv2851343,nssv2851325,nssv2851385,nssv2851235,nssv2851244,nssv2851404,nssv2851157,nssv2851335,nssv2851280,nssv2851160,nssv2851202,nssv2851310,nssv2851332,nssv2848499,nssv2851290,nssv2851159,nssv2851251,nssv2848506,nssv2851229,nssv2851258,nssv2851349,nssv2851400,nssv2851257,nssv2851312,nssv2851212,nssv2848508,nssv2851286,nssv2851295,nssv2851190,nssv2851238,nssv2848507,nssv2851155,nssv2851181,nssv2851246,nssv2851319,nssv2851304,nssv2851314,nssv2851201,nssv2851276,nssv2851247,nssv2851215,nssv2851243,nssv2851278,nssv2851281,nssv2851271,nssv2851183,nssv2851351,nssv2851187,nssv2851297,nssv2851177,nssv2851294,nssv2851359,nssv2851270,nssv2851376,nssv2851153,nssv2851197,nssv2851303,nssv2851313,nssv2851210,nssv2851237,nssv2851346,nssv2848498,nssv2851282,nssv2851410,nssv2851231,nssv2851324,nssv2851336,nssv2851193,nssv2851398,nssv2851241,nssv2851248,nssv2851399,nssv2851392,nssv2851377,nssv2851256,nssv2851158,nssv2851269,nssv2851330,nssv2851236,nssv2851191,nssv2851167,nssv2851307,nssv2851277,nssv2851156,nssv2851344,nssv2851305,nssv2851166,nssv2851254,nssv2851226,nssv2851357,nssv2851342,nssv2848511,nssv2851173,nssv2851311,nssv2851360,nssv2851249,nssv2851301,nssv2851326,nssv2851296,nssv2851369,nssv2851273,nssv2851245,nssv2851320,nssv2851289,nssv2851174,nssv2851233,nssv2851401,nssv2851262,nssv2851406,nssv2848497,nssv2851334,nssv2851374,nssv2851318,nssv2851272,nssv2851205,nssv2851184,nssv2848495,nssv2851408,nssv2851382,nssv2851347,nssv2851292,nssv2851188,nssv2851172,nssv2848513,nssv2851192,nssv2851379,nssv2851211,nssv2851227,nssv2851219,nssv2851352,nssv2851200,nssv2851396,nssv2851373,nssv2851329,nssv2851375,nssv2851162,nssv2851240,nssv2851214,nssv2851213,nssv2851356,nssv2848504,nssv2851199,nssv2851363,nssv2851287,nssv2851361,nssv2851327,nssv2848514,nssv2851388,nssv2848500,nssv2851348,nssv2851252,nssv2851206,nssv2851407,nssv2851204,nssv2851216,nssv2851291,nssv2851380,nssv2848502,nssv2851383,nssv2848512,nssv2851175,nssv2851322,nssv2851350,nssv2851182,nssv2851180,nssv2851168,nssv2851365,nssv2851255,nssv2851288,nssv2851391,nssv2851354,nssv2851302,nssv2851405,nssv2851370,nssv2851154,nssv2851209,nssv2851198,nssv2851161,nssv2851263,nssv2851228,nssv2851232,nssv2851340,nssv2851317,nssv2851221,nssv2851203,nssv2851309,nssv2848510,nssv2851395,nssv2851186,nssv2851315,nssv2851389,nssv2851412,nssv2851339,nssv2851218,nssv2848505,nssv2851185,nssv2851353,nssv2851366,nssv2851268,nssv2848501,nssv2851397,nssv2851164,nssv2851264,nssv2851362,nssv2851367,nssv2851171,nssv2851393,nssv2848503,nssv2851189,nssv2851341,nssv2851222,nssv2851331,nssv2851403,nssv2851275,nssv2851316,nssv2851274,nssv2851223,nssv2851253,nssv2851230,nssv2851328,nssv2851260,nssv2851306,nssv2848509,nssv2851250,nssv2851259,nssv2851261,nssv2851323,nssv2848515,nssv2851386,nssv2851358,nssv2851333,nssv2851402,nssv2851234,nssv2851208,nssv2851364,nssv2851217,nssv2851283,nssv2851409,nssv2848496,nssv2851267,nssv2851169,nssv2851345,nssv2851239,nssv2851371,nssv2851242,nssv2851384,nssv2851265,nssv2851179,nssv2851284,nssv2851368,nssv2851381 M 2366 0 281 "" NA06984,NA06994,NA06995,NA07022,NA07031,NA07055,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10838,NA10839,NA10840,NA10843,NA10846,NA10855,NA10859,NA11831,NA11832,NA11839,NA11843,NA11882,NA11893,NA11919,NA11993,NA12004,NA12005,NA12043,NA12056,NA12145,NA12146,NA12154,NA12234,NA12236,NA12272,NA12275,NA12282,NA12283,NA12286,NA12287,NA12335,NA12336,NA12340,NA12341,NA12344,NA12347,NA12348,NA12376,NA12383,NA12489,NA12708,NA12748,NA12750,NA12752,NA12760,NA12761,NA12763,NA12777,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12827,NA12830,NA12832,NA12872,NA12874,NA12875,NA12878,NA12890,NA12891,NA12892,NA18484,NA18486,NA18488,NA18497,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18516,NA18522,NA18524,NA18532,NA18537,NA18545,NA18547,NA18550,NA18552,NA18555,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18635,NA18636,NA18637,NA18853,NA18855,NA18859,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18871,NA18873,NA18907,NA18908,NA18909,NA18910,NA18911,NA18917,NA18923,NA18924,NA18925,NA18933,NA18934,NA18935,NA18940,NA18942,NA18947,NA18948,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19005,NA19007,NA19012,NA19096,NA19097,NA19103,NA19107,NA19113,NA19114,NA19115,NA19119,NA19121,NA19122,NA19123,NA19128,NA19130,NA19131,NA19132,NA19138,NA19140,NA19144,NA19145,NA19171,NA19172,NA19173,NA19178,NA19179,NA19180,NA19181,NA19183,NA19184,NA19186,NA19189,NA19190,NA19191,NA19192,NA19194,NA19197,NA19198,NA19199,NA19201,NA19202,NA19205,NA19207,NA19208,NA19209,NA19211,NA19223,NA19236,NA19239,NA19247,NA19256,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21316,NA21317,NA21344,NA21362,NA21366,NA21387,NA21390,NA21403,NA21423,NA21425,NA21440,NA21441,NA21442,NA21453,NA21475,NA21476,NA21477,NA21486,NA21489,NA21490,NA21493,NA21524,NA21525,NA21580,NA21599,NA21601,NA21608,NA21634,NA21648,NA21686,NA21717,NA21718 dgv600n54 1 157134937 157136544 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548028,nsv548030,nsv548029 M 17421 5 0 "" nsv1007597 1 157141430 157200925 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704745 M 29084 0 1 PYHIN1 nsv525964 1 157167751 157168968 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702177 M 2026 0 1 PYHIN1 nsv518819 1 157167751 157169876 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696272 M 2026 0 1 PYHIN1 nsv3176 1 157221997 157253192 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3433 M 9 0 1 IFI16 NA12878 esv2538030 1 157227377 157233449 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5283099 M 1 0 1 "" NA18507 nsv825008 1 157227605 157232987 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431847,nssv1424773 M 31 0 2 "" AK2,AK20 nsv436565 1 157227761 157233914 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465856 M 2 0 1 "" NA18505 esv2224503 1 157227791 157232970 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4747173 M 1 0 1 "" NA18507 nsv819359 1 157227826 157233464 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419724 M 2 1 0 "" AK1 nsv820489 1 157227872 157232987 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420691 M 1 0 1 "" NA10851 nsv498692 1 157227975 157232830 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585406 M 9 0 1 "" esv26648 1 157228357 157232921 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16743 M 40 24 0 "" NA06985,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12414,NA12489,NA12749,NA12776,NA15510,NA18511,NA18858,NA18861,NA18909,NA19099,NA19114,NA19147,NA19190,NA19225,NA19240,NA19257 dgv601n54 1 157228649 157232802 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548031,nsv548033,nsv548032,nsv548034,nsv548035 M 17421 0 6 "" dgv602n54 1 157229493 157232802 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548037,nsv548036,nsv548044,nsv548039,nsv548040,nsv548038,nsv548041 M 17421 0 38 "" nsv548042 1 157229751 157233670 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv726557 M 17421 0 1 "" nsv548043 1 157229751 157239114 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv726558 M 17421 0 1 "" esv32912 1 157247463 157248191 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv100842 M 51 0 1 IFI16 21656 nsv506961 1 157269600 157275600 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619251,nssv617542,nssv620668 M 4 0 0 IFI16 CHM,NA10860,NA15510 esv33390 1 157271198 157271450 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv96453 M 51 1 0 IFI16 22261 esv33763 1 157274185 157274552 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv96513 M 51 0 1 IFI16 22261 esv6708 1 157278956 157283420 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29149 M 1 0 0 IFI16 esv21466 1 157279390 157286455 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13216 M 40 2 1 IFI16 NA12239,NA12489,NA12878 dgv603n54 1 157279396 157285726 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548046,nsv548045,nsv548047 M 17421 0 3 IFI16 nsv825019 1 157279479 157286201 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1421481 M 31 0 1 IFI16 NA18997 nsv825032 1 157280538 157283608 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1424774 M 31 0 1 IFI16 AK2 dgv604n54 1 157280975 157284546 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548049,nsv548048 M 17421 0 2 IFI16 nsv946445 1 157301667 157302525 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1801633,nssv1801767,nssv1802261,nssv1801773,nssv1802263,nssv1801775,nssv1801755,nssv1801817,nssv1801643,nssv1801789,nssv1801642,nssv1801786,nssv1801810,nssv1801811,nssv1801641,nssv1801762,nssv1802260,nssv1801761,nssv1802268,nssv1801782,nssv1802274,nssv1802272,nssv1801635,nssv1801630,nssv1801640,nssv1801812,nssv1802271,nssv1801779,nssv1801805,nssv1801800,nssv1801631,nssv1802276,nssv1801632,nssv1801788,nssv1802265,nssv1802273,nssv1801801,nssv1801784,nssv1801803,nssv1801790,nssv1801807,nssv1801770,nssv1802266,nssv1801778,nssv1801802,nssv1801794,nssv1802264,nssv1801777,nssv1801638,nssv1801813,nssv1801809,nssv1801763,nssv1801804,nssv1801820,nssv1801634,nssv1802269,nssv1801636,nssv1801797,nssv1802267,nssv1801768,nssv1801808,nssv1801759,nssv1802275,nssv1801757,nssv1801639,nssv1801771,nssv1802262,nssv1801796,nssv1801806,nssv1801798,nssv1801637,nssv1801792,nssv1802270,nssv1801791,nssv1801766,nssv1801818,nssv1801760,nssv1801780,nssv1801769,nssv1801814,nssv1801774,nssv1801783,nssv1801793,nssv1801787,nssv1801758,nssv1801776,nssv1801816,nssv1801781,nssv1801765,nssv1801795,nssv1801764,nssv1801756,nssv1801785,nssv1801819,nssv1801815,nssv1801799,nssv1801772 M 97 10 0 AIM2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2473532 1 157316264 157317715 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5327447 M 1 0 1 "" NA18507 nsv825043 1 157332772 157334568 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422395 M 31 0 1 "" NA18552 esv25078 1 157384975 157390619 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20254 M 40 0 2 "" NA18517,NA19108 nsv946446 1 157463863 157464877 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1801850,nssv1801894,nssv1801838,nssv1801908,nssv1801835,nssv1801882,nssv1801831,nssv1801881,nssv1801834,nssv1801916,nssv1801833,nssv1801914,nssv1801849,nssv1801896,nssv1801841,nssv1801892,nssv1801903,nssv1801872,nssv1801836,nssv1801886,nssv1801823,nssv1801821,nssv1801832,nssv1801883,nssv1801898,nssv1801859,nssv1801840,nssv1801870,nssv1801852,nssv1801885,nssv1801822,nssv1801858,nssv1801829,nssv1801909,nssv1801839,nssv1801876,nssv1801900,nssv1801864,nssv1801830,nssv1801879,nssv1801827,nssv1801844,nssv1801825,nssv1801891,nssv1801901,nssv1801897,nssv1801905,nssv1801887,nssv1801842,nssv1801867,nssv1801837,nssv1801853,nssv1801904,nssv1801863,nssv1801826,nssv1801860,nssv1801907,nssv1801861,nssv1801843,nssv1801895,nssv1801906,nssv1801910,nssv1801899,nssv1801874,nssv1801846,nssv1801893,nssv1801902,nssv1801854,nssv1801824,nssv1801865,nssv1801845,nssv1801877,nssv1801828,nssv1801911,nssv1801868,nssv1801866,nssv1801857,nssv1801889,nssv1801917,nssv1801888,nssv1801856,nssv1801915,nssv1801871,nssv1801890,nssv1801875,nssv1801847,nssv1801880,nssv1801851,nssv1801855,nssv1801873,nssv1801878,nssv1801884,nssv1801862,nssv1801848,nssv1801913,nssv1801869,nssv1801912 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946448 1 157476203 157477691 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803234,nssv1803205,nssv1801932,nssv1803222,nssv1801935,nssv1803208,nssv1803229,nssv1803197,nssv1803232,nssv1801945,nssv1803228,nssv1803238,nssv1801946,nssv1803203,nssv1801927,nssv1803226,nssv1801929,nssv1801951,nssv1801923,nssv1803209,nssv1801947,nssv1803216,nssv1803235,nssv1803187,nssv1801949,nssv1803218,nssv1801931,nssv1803224,nssv1801937,nssv1803211,nssv1801933,nssv1803206,nssv1803227,nssv1803237,nssv1801920,nssv1801941,nssv1801919,nssv1803210,nssv1801921,nssv1803219,nssv1801938,nssv1803190,nssv1801926,nssv1803240,nssv1801924,nssv1803189,nssv1801936,nssv1803225,nssv1801943,nssv1803200,nssv1803233,nssv1803193,nssv1801922,nssv1803221,nssv1801928,nssv1803199,nssv1801939,nssv1803215,nssv1803230,nssv1803246,nssv1803236,nssv1803244,nssv1801934,nssv1803194,nssv1803231,nssv1803212,nssv1801930,nssv1803217,nssv1801942,nssv1803188,nssv1801925,nssv1803185,nssv1801940,nssv1803207,nssv1803192,nssv1801918,nssv1803204,nssv1803202,nssv1803220,nssv1801950,nssv1803245,nssv1803241,nssv1803198,nssv1803242,nssv1803243,nssv1803213,nssv1803195,nssv1803186,nssv1803223,nssv1803191,nssv1803201,nssv1803196,nssv1803214,nssv1803239,nssv1801944,nssv1803184,nssv1801948 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1183719 1 157686411 157686411 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4187164 M 2 1 0 "" HuRef esv275232 1 157719383 157722962 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586086 M 1250 0 1 "" nsv1005195 1 157719383 158176961 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490007 M 29084 1 0 APCS,C1orf204,CCDC19,CRP,DUSP23,FCRL6,IGSF9,OR10J5,SLAMF8,TAGLN2,VSIG8 nsv472119 1 157837948 157837948 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020286 M 9 1 0 "" NA18555 nsv523257 1 157848011 157848842 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698987 M 2026 0 1 "" nsv522601 1 157880422 157883253 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705992 M 2026 0 1 "" esv22325 1 157883123 157884293 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20037 M 40 0 1 "" NA11993 nsv3188 1 157901756 157942806 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7732 M 9 0 1 "" NA12156 nsv478676 1 157902762 157902762 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019682 M 9 1 0 "" NA18507 nsv946450 1 157904657 157905256 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803315,nssv1803363,nssv1803343,nssv1803303,nssv1803328,nssv1803285,nssv1803279,nssv1803296,nssv1803337,nssv1803281,nssv1803305,nssv1803304,nssv1803313,nssv1803291,nssv1803325,nssv1803364,nssv1803367,nssv1803297,nssv1803355,nssv1803284,nssv1803338,nssv1803361,nssv1803375,nssv1803308,nssv1803332,nssv1803360,nssv1803345,nssv1803293,nssv1803347,nssv1803282,nssv1803334,nssv1803292,nssv1803353,nssv1803299,nssv1803351,nssv1803289,nssv1803306,nssv1803356,nssv1803366,nssv1803307,nssv1803309,nssv1803298,nssv1803340,nssv1803358,nssv1803369,nssv1803357,nssv1803335,nssv1803295,nssv1803354,nssv1803301,nssv1803330,nssv1803310,nssv1803318,nssv1803287,nssv1803320,nssv1803283,nssv1803346,nssv1803359,nssv1803329,nssv1803362,nssv1803348,nssv1803290,nssv1803323,nssv1803288,nssv1803302,nssv1803300,nssv1803373,nssv1803280,nssv1803319,nssv1803365,nssv1803322,nssv1803286,nssv1803312,nssv1803294,nssv1803342,nssv1803349,nssv1803371,nssv1803374,nssv1803317,nssv1803344,nssv1803331,nssv1803370,nssv1803314,nssv1803350,nssv1803311,nssv1803321,nssv1803341,nssv1803368,nssv1803372,nssv1803339,nssv1803336,nssv1803316,nssv1803333,nssv1803324,nssv1803352,nssv1803327,nssv1803326 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1004314 1 157914010 157918732 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563905 M 3 0 1 "" HuRef nsv511718 1 157914665 157916449 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626360 M 1 0 1 "" 1 esv8340 1 157915081 157916524 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30781 M 1 0 0 "" nsv819158 1 157915204 157916305 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419171 M 2 0 1 "" AK1 dgv83n67 1 157915302 157916265 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825054,nsv825065 M 31 0 30 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv820988 1 157915302 157916265 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420702 M 1 0 1 "" NA10851 esv3819 1 157915303 157916336 CNV loss Wang_et_al_2008 18987735 Sequencing essv26260 M 1 0 1 "" YH esv1002313 1 157915331 157916280 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3576985 M 3 0 1 "" HuRef nsv160520 1 157915332 157916281 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179098 M 24 "" esv1130296 1 157915332 157916282 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4003417 M 2 0 1 "" HuRef nsv514014 1 157915376 157916048 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2848726,nssv2848630,nssv2848603,nssv2848626,nssv2848628,nssv2848651,nssv2848587,nssv2848698,nssv2848609,nssv2848740,nssv2848550,nssv2848517,nssv2848712,nssv2848793,nssv2848633,nssv2848765,nssv2848750,nssv2848730,nssv2848779,nssv2848590,nssv2848547,nssv2848518,nssv2848676,nssv2848622,nssv2848594,nssv2848702,nssv2848566,nssv2848753,nssv2848692,nssv2848674,nssv2848638,nssv2848588,nssv2848718,nssv2848540,nssv2848682,nssv2848610,nssv2848548,nssv2848525,nssv2848751,nssv2848545,nssv2848755,nssv2848583,nssv2848578,nssv2848788,nssv2848781,nssv2848759,nssv2848542,nssv2848644,nssv2848597,nssv2848656,nssv2848662,nssv2848725,nssv2848700,nssv2848647,nssv2848571,nssv2848792,nssv2848643,nssv2848715,nssv2848745,nssv2848572,nssv2848709,nssv2848527,nssv2848530,nssv2848635,nssv2848565,nssv2848574,nssv2848544,nssv2848599,nssv2848720,nssv2848658,nssv2848567,nssv2848553,nssv2848581,nssv2848734,nssv2848723,nssv2848612,nssv2848535,nssv2848789,nssv2848727,nssv2848705,nssv2848620,nssv2848746,nssv2848671,nssv2848764,nssv2848602,nssv2848722,nssv2848760,nssv2848786,nssv2848777,nssv2848625,nssv2848575,nssv2848577,nssv2848688,nssv2848736,nssv2848568,nssv2848729,nssv2848551,nssv2848573,nssv2848708,nssv2848608,nssv2848646,nssv2848613,nssv2848728,nssv2848546,nssv2848707,nssv2848691,nssv2848522,nssv2848668,nssv2848539,nssv2848617,nssv2848627,nssv2848757,nssv2848636,nssv2848592,nssv2848681,nssv2848653,nssv2848669,nssv2848585,nssv2848706,nssv2848762,nssv2848784,nssv2848711,nssv2848562,nssv2848675,nssv2848699,nssv2848557,nssv2848637,nssv2848586,nssv2848580,nssv2848678,nssv2848607,nssv2848559,nssv2848772,nssv2848733,nssv2848629,nssv2848741,nssv2848770,nssv2848521,nssv2848529,nssv2848743,nssv2848593,nssv2848614,nssv2848605,nssv2848563,nssv2848623,nssv2848556,nssv2848552,nssv2848713,nssv2848589,nssv2848652,nssv2848531,nssv2848619,nssv2848621,nssv2848541,nssv2848780,nssv2848582,nssv2848520,nssv2848560,nssv2848591,nssv2848775,nssv2848655,nssv2848657,nssv2848564,nssv2848747,nssv2848598,nssv2848670,nssv2848632,nssv2848533,nssv2848665,nssv2848543,nssv2848721,nssv2848673,nssv2848649,nssv2848689,nssv2848738,nssv2848774,nssv2848554,nssv2848693,nssv2848701,nssv2848579,nssv2848687,nssv2848528,nssv2848731,nssv2848680,nssv2848724,nssv2848767,nssv2848703,nssv2848661,nssv2848683,nssv2848776,nssv2848600,nssv2848576,nssv2848737,nssv2848534,nssv2848561,nssv2848555,nssv2848754,nssv2848761,nssv2848654,nssv2848642,nssv2848695,nssv2848596,nssv2848660,nssv2848710,nssv2848536,nssv2848526,nssv2848768,nssv2848537,nssv2848685,nssv2848758,nssv2848716,nssv2848569,nssv2848739,nssv2848618,nssv2848790,nssv2848686,nssv2848763,nssv2848639,nssv2848664,nssv2848516,nssv2848756,nssv2848631,nssv2848666,nssv2848538,nssv2848771,nssv2848714,nssv2848672,nssv2848744,nssv2848604,nssv2848694,nssv2848785,nssv2848524,nssv2848650,nssv2848783,nssv2848697,nssv2848595,nssv2848606,nssv2848782,nssv2848641,nssv2848742,nssv2848787,nssv2848677,nssv2848773,nssv2848624,nssv2848584,nssv2848732,nssv2848717,nssv2848663,nssv2848667,nssv2848719,nssv2848523,nssv2848752,nssv2848519,nssv2848748,nssv2848659,nssv2848645,nssv2848640,nssv2848601,nssv2848648,nssv2848570,nssv2848766,nssv2848634,nssv2848549,nssv2848611,nssv2848690,nssv2848616,nssv2848749,nssv2848696,nssv2848679,nssv2848704,nssv2848791,nssv2848735,nssv2848778,nssv2848769,nssv2848615,nssv2848684,nssv2848532,nssv2848558 M 2366 53 225 "" NA06984,NA06986,NA06989,NA06991,NA06993,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07048,NA07051,NA07056,NA07346,NA07348,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10855,NA10856,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11881,NA11892,NA11894,NA11917,NA11919,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12056,NA12234,NA12239,NA12264,NA12272,NA12273,NA12275,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12399,NA12414,NA12485,NA12489,NA12546,NA12716,NA12717,NA12748,NA12751,NA12752,NA12761,NA12763,NA12766,NA12775,NA12776,NA12777,NA12802,NA12812,NA12814,NA12815,NA12817,NA12827,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12873,NA12874,NA12889,NA12891,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18503,NA18504,NA18506,NA18507,NA18511,NA18516,NA18517,NA18522,NA18524,NA18532,NA18545,NA18552,NA18555,NA18563,NA18566,NA18571,NA18572,NA18576,NA18577,NA18579,NA18582,NA18593,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18856,NA18860,NA18861,NA18863,NA18867,NA18869,NA18871,NA18873,NA18874,NA18875,NA18907,NA18908,NA18916,NA18917,NA18923,NA18934,NA18940,NA18942,NA18945,NA18947,NA18948,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18973,NA18975,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18998,NA19000,NA19007,NA19092,NA19095,NA19098,NA19100,NA19103,NA19107,NA19114,NA19116,NA19123,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19141,NA19144,NA19145,NA19147,NA19148,NA19149,NA19150,NA19160,NA19161,NA19174,NA19181,NA19189,NA19191,NA19193,NA19200,NA19204,NA19208,NA19209,NA19214,NA19221,NA19222,NA19224,NA19225,NA19235,NA19239,NA19247,NA19256,NA19257,NA21309,NA21312,NA21316,NA21359,NA21360,NA21363,NA21365,NA21366,NA21382,NA21384,NA21386,NA21388,NA21390,NA21399,NA21403,NA21404,NA21438,NA21439,NA21441,NA21447,NA21453,NA21455,NA21475,NA21477,NA21479,NA21489,NA21490,NA21493,NA21494,NA21513,NA21514,NA21522,NA21580,NA21601,NA21608,NA21614,NA21615,NA21635,NA21716,NA21718 esv29934 1 157915386 157916253 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10937 M 40 3 18 "" NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12239,NA12287,NA12414,NA12489,NA12776,NA15510,NA18511,NA18517,NA18861,NA18907,NA18916,NA19114,NA19129,NA19147,NA19225 nsv548050 1 157915415 157916146 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv726706,nssv727528,nssv727516,nssv726996,nssv726752,nssv727506,nssv727155,nssv726580,nssv727102,nssv726608,nssv727148,nssv726665,nssv727116,nssv726659,nssv727238,nssv727509,nssv727002,nssv726750,nssv727510,nssv726776,nssv726751,nssv727241,nssv726808,nssv727147,nssv727215,nssv726929,nssv726569,nssv726759,nssv727189,nssv727240,nssv727004,nssv727078,nssv726928,nssv727508,nssv727291,nssv727009,nssv727255,nssv727239,nssv727247,nssv727242,nssv727507,nssv727498,nssv727115,nssv727105,nssv727517,nssv726754,nssv727527,nssv726758,nssv726578,nssv727246,nssv727244,nssv727515,nssv726586,nssv726753,nssv727243,nssv727104,nssv726579,nssv727514,nssv727512,nssv727513,nssv727103,nssv726605,nssv726570,nssv727511,nssv726585,nssv727109,nssv727526,nssv727523,nssv726584,nssv727106,nssv726756,nssv726757,nssv726581,nssv727522,nssv727107,nssv727245,nssv727114,nssv726755,nssv727108,nssv727521,nssv727518,nssv727520,nssv727519,nssv726582,nssv727525,nssv727113,nssv727524,nssv727111,nssv727110,nssv726583,nssv727112,nssv726640,nssv726607,nssv726766,nssv727669,nssv727529,nssv727532,nssv727540,nssv726760,nssv727531,nssv727146,nssv727254,nssv727118,nssv727154,nssv727530,nssv727668,nssv727117,nssv727539,nssv727536,nssv726765,nssv726762,nssv726593,nssv727534,nssv726592,nssv727533,nssv726591,nssv727535,nssv726761,nssv727544,nssv726764,nssv726590,nssv727667,nssv727543,nssv727538,nssv727537,nssv726589,nssv727542,nssv727541,nssv726775,nssv726588,nssv726587,nssv726763,nssv727153,nssv726596,nssv727142,nssv726603,nssv726769,nssv726595,nssv727249,nssv727145,nssv727253,nssv726628,nssv726768,nssv726606,nssv727248,nssv726594,nssv727119,nssv726774,nssv726767,nssv727144,nssv726602,nssv726773,nssv727252,nssv726770,nssv726604,nssv727143,nssv727152,nssv726597,nssv727151,nssv726601,nssv726599,nssv727251,nssv726772,nssv727149,nssv726600,nssv727150,nssv726598,nssv727250,nssv726771,nssv727290,nssv727161,nssv726610,nssv726614,nssv727257,nssv727188,nssv726987,nssv726927,nssv727273,nssv727261,nssv726793,nssv727168,nssv726664,nssv726639,nssv727256,nssv726627,nssv726782,nssv726783,nssv726613,nssv726780,nssv726609,nssv727260,nssv727160,nssv726779,nssv726777,nssv726778,nssv727259,nssv727159,nssv726612,nssv727156,nssv726781,nssv727258,nssv726611,nssv727157,nssv727158,nssv727262,nssv727163,nssv726623,nssv726788,nssv727266,nssv727162,nssv727272,nssv727167,nssv726622,nssv726619,nssv726792,nssv727165,nssv727265,nssv726618,nssv726787,nssv726786,nssv727164,nssv727263,nssv726785,nssv727264,nssv726784,nssv726791,nssv726617,nssv726615,nssv726621,nssv727271,nssv726616,nssv727267,nssv727166,nssv727270,nssv726790,nssv726789,nssv727268,nssv727269,nssv726620,nssv727170,nssv727276,nssv726924,nssv726794,nssv727274,nssv727187,nssv726807,nssv727177,nssv726926,nssv727169,nssv726626,nssv726799,nssv727289,nssv727275,nssv727277,nssv726638,nssv726796,nssv727176,nssv726625,nssv726624,nssv727171,nssv726795,nssv726798,nssv727172,nssv727173,nssv726797,nssv727174,nssv727175,nssv727281,nssv727179,nssv727284,nssv727178,nssv726631,nssv727186,nssv726803,nssv727288,nssv726801,nssv726806,nssv727278,nssv727280,nssv726637,nssv726805,nssv726800,nssv727279,nssv727282,nssv727283,nssv726802,nssv726630,nssv726629,nssv727285,nssv727182,nssv727180,nssv726636,nssv726804,nssv726632,nssv727185,nssv727287,nssv727181,nssv727184,nssv726635,nssv727286,nssv727183,nssv726633,nssv726634,nssv726666,nssv727469,nssv727199,nssv726995,nssv727217,nssv727302,nssv727307,nssv727191,nssv726993,nssv727505,nssv726976,nssv727237,nssv727296,nssv727499,nssv727218,nssv726985,nssv727222,nssv727477,nssv726933,nssv727216,nssv727292,nssv727190,nssv726959,nssv726647,nssv727295,nssv726667,nssv726658,nssv727294,nssv726932,nssv726657,nssv726923,nssv727293,nssv726930,nssv726920,nssv726919,nssv727301,nssv726917,nssv727297,nssv726705,nssv726812,nssv726670,nssv727198,nssv726809,nssv726810,nssv727193,nssv726646,nssv726641,nssv726811,nssv727192,nssv726916,nssv727298,nssv726914,nssv727300,nssv727197,nssv727194,nssv726915,nssv726642,nssv726643,nssv726645,nssv726913,nssv727196,nssv726644,nssv727299,nssv727195,nssv726935,nssv727201,nssv727219,nssv726653,nssv727497,nssv727214,nssv727476,nssv726952,nssv726958,nssv726946,nssv727468,nssv727306,nssv727221,nssv727200,nssv726925,nssv727203,nssv726669,nssv727304,nssv727303,nssv727305,nssv726656,nssv726648,nssv727326,nssv727460,nssv726945,nssv727459,nssv726649,nssv727202,nssv727325,nssv726936,nssv726652,nssv727456,nssv726651,nssv726944,nssv727458,nssv727455,nssv727457,nssv726650,nssv727213,nssv726949,nssv726951,nssv726668,nssv727212,nssv727475,nssv727467,nssv726957,nssv727204,nssv726655,nssv726953,nssv726948,nssv726947,nssv727206,nssv727210,nssv726954,nssv726654,nssv727474,nssv726950,nssv727205,nssv726956,nssv727462,nssv727461,nssv727211,nssv727220,nssv727209,nssv727207,nssv727473,nssv726955,nssv727465,nssv727463,nssv727464,nssv727466,nssv727208,nssv727480,nssv727236,nssv727223,nssv727224,nssv726671,nssv726992,nssv726704,nssv727478,nssv727324,nssv727487,nssv726934,nssv726983,nssv727504,nssv727500,nssv727488,nssv726994,nssv726962,nssv727308,nssv727233,nssv726680,nssv727225,nssv726931,nssv726965,nssv726964,nssv726674,nssv727479,nssv726961,nssv727484,nssv727496,nssv727486,nssv727227,nssv726679,nssv727226,nssv726673,nssv726960,nssv726672,nssv727230,nssv727481,nssv727232,nssv727483,nssv727485,nssv726963,nssv727231,nssv727482,nssv726678,nssv726677,nssv726676,nssv726675,nssv727235,nssv727490,nssv726970,nssv727234,nssv727315,nssv726979,nssv727309,nssv726681,nssv726971,nssv726689,nssv727495,nssv727493,nssv727503,nssv727310,nssv726991,nssv726966,nssv727489,nssv726989,nssv727314,nssv726703,nssv726969,nssv726688,nssv726684,nssv727323,nssv726682,nssv727313,nssv726683,nssv726968,nssv726967,nssv726685,nssv726918,nssv727311,nssv726686,nssv727312,nssv726687,nssv726988,nssv727491,nssv726974,nssv726972,nssv726990,nssv726695,nssv726973,nssv726692,nssv727316,nssv726691,nssv726690,nssv726702,nssv727502,nssv727317,nssv727318,nssv727494,nssv726693,nssv727322,nssv726978,nssv726694,nssv727492,nssv726981,nssv726984,nssv727501,nssv727321,nssv726701,nssv726697,nssv726977,nssv726975,nssv726696,nssv726698,nssv727320,nssv726700,nssv726980,nssv727319,nssv726699,nssv726982,nssv726739,nssv727347,nssv727228,nssv727545,nssv726986,nssv727101,nssv727077,nssv727046,nssv727020,nssv726713,nssv727019,nssv727018,nssv727329,nssv726998,nssv727141,nssv727335,nssv726719,nssv727328,nssv727666,nssv726712,nssv726999,nssv727048,nssv727567,nssv726568,nssv727552,nssv727472,nssv726663,nssv727454,nssv727327,nssv726709,nssv726708,nssv726707,nssv726711,nssv726710,nssv727229,nssv727386,nssv727551,nssv726718,nssv726922,nssv726716,nssv727334,nssv727331,nssv726912,nssv726943,nssv727330,nssv726714,nssv726715,nssv727550,nssv726813,nssv727333,nssv726814,nssv726749,nssv726746,nssv727549,nssv727332,nssv726816,nssv726717,nssv727548,nssv727547,nssv727546,nssv727557,nssv727005,nssv727338,nssv727017,nssv726720,nssv727015,nssv726721,nssv727566,nssv727013,nssv727001,nssv726997,nssv727556,nssv726722,nssv727553,nssv727336,nssv726815,nssv726723,nssv726725,nssv727555,nssv727337,nssv726724,nssv727346,nssv727554,nssv726726,nssv726727,nssv726729,nssv726738,nssv726728,nssv726731,nssv726730,nssv727345,nssv727559,nssv727011,nssv727565,nssv727016,nssv727014,nssv727558,nssv727561,nssv727012,nssv727560,nssv727340,nssv727010,nssv727564,nssv727344,nssv727008,nssv726734,nssv726732,nssv727339,nssv726735,nssv726733,nssv726736,nssv727562,nssv727563,nssv727341,nssv727006,nssv726737,nssv727343,nssv727007,nssv727342,nssv727022,nssv727029,nssv727580,nssv727023,nssv727569,nssv727045,nssv727047,nssv727353,nssv727365,nssv727348,nssv727349,nssv726744,nssv727031,nssv727030,nssv726839,nssv727050,nssv726740,nssv727049,nssv727352,nssv726817,nssv727021,nssv727568,nssv726745,nssv727351,nssv727385,nssv726840,nssv727350,nssv726821,nssv727573,nssv726741,nssv727028,nssv727026,nssv727027,nssv726818,nssv727358,nssv727572,nssv727364,nssv727575,nssv727571,nssv727601,nssv727570,nssv727357,nssv726743,nssv727574,nssv727354,nssv727356,nssv727355,nssv727025,nssv726742,nssv727579,nssv726819,nssv727363,nssv727024,nssv726820,nssv727578,nssv727577,nssv727362,nssv727576,nssv727361,nssv727360,nssv727359,nssv727584,nssv727587,nssv726823,nssv727044,nssv727384,nssv727042,nssv727367,nssv727376,nssv727043,nssv727035,nssv726822,nssv727366,nssv727599,nssv727583,nssv727037,nssv727582,nssv727600,nssv727581,nssv727036,nssv727034,nssv727371,nssv727586,nssv727032,nssv727033,nssv726826,nssv727375,nssv726825,nssv726824,nssv727370,nssv727369,nssv727368,nssv726828,nssv727374,nssv726827,nssv727585,nssv726838,nssv727372,nssv727373,nssv727039,nssv726831,nssv727380,nssv727591,nssv727377,nssv727040,nssv726829,nssv726830,nssv727383,nssv727041,nssv727379,nssv727598,nssv727589,nssv727590,nssv727378,nssv727588,nssv726837,nssv726833,nssv727038,nssv727597,nssv727593,nssv727594,nssv726832,nssv727382,nssv727592,nssv727381,nssv726835,nssv726836,nssv727596,nssv726834,nssv727595,nssv726841,nssv727637,nssv727100,nssv727076,nssv727399,nssv726942,nssv727665,nssv727388,nssv727062,nssv727079,nssv727055,nssv727085,nssv727075,nssv727051,nssv727620,nssv727417,nssv727609,nssv726748,nssv727003,nssv727604,nssv727140,nssv726662,nssv726941,nssv727387,nssv727453,nssv727608,nssv727603,nssv727471,nssv727470,nssv727602,nssv727000,nssv726937,nssv727607,nssv726911,nssv727606,nssv727605,nssv727053,nssv727398,nssv727614,nssv726855,nssv726845,nssv726854,nssv727054,nssv727393,nssv726842,nssv727061,nssv727052,nssv727392,nssv726870,nssv727389,nssv727613,nssv727610,nssv726844,nssv727611,nssv727391,nssv727612,nssv726843,nssv727390,nssv727060,nssv727397,nssv727619,nssv727056,nssv726847,nssv726848,nssv726853,nssv726846,nssv726852,nssv727394,nssv727618,nssv727059,nssv726849,nssv727617,nssv727057,nssv726851,nssv727058,nssv727396,nssv727395,nssv727615,nssv726850,nssv727616,nssv727626,nssv727074,nssv727069,nssv726921,nssv727636,nssv727639,nssv727403,nssv726861,nssv727066,nssv726938,nssv727402,nssv726567,nssv727080,nssv727070,nssv727400,nssv726856,nssv727084,nssv727401,nssv727404,nssv727067,nssv727407,nssv727638,nssv727408,nssv726860,nssv727068,nssv727064,nssv726857,nssv727624,nssv726859,nssv727063,nssv727065,nssv727625,nssv727621,nssv727416,nssv727406,nssv727623,nssv727405,nssv726858,nssv727622,nssv727071,nssv727635,nssv727627,nssv727081,nssv727411,nssv727409,nssv727083,nssv727073,nssv727415,nssv727410,nssv726868,nssv726869,nssv727634,nssv726867,nssv727633,nssv726865,nssv726862,nssv727412,nssv727628,nssv727082,nssv726864,nssv726863,nssv727414,nssv727072,nssv727632,nssv726866,nssv727631,nssv727630,nssv727629,nssv727413,nssv727096,nssv727089,nssv727139,nssv727099,nssv727651,nssv727664,nssv726874,nssv727663,nssv726566,nssv727097,nssv726910,nssv727086,nssv727641,nssv727421,nssv726940,nssv726747,nssv726661,nssv726939,nssv727640,nssv727420,nssv726873,nssv727452,nssv726871,nssv727088,nssv727419,nssv726884,nssv727435,nssv726872,nssv727087,nssv727418,nssv727423,nssv727650,nssv727094,nssv726875,nssv727644,nssv727434,nssv726877,nssv727095,nssv727090,nssv726876,nssv727422,nssv727643,nssv727642,nssv726883,nssv727646,nssv727093,nssv727433,nssv727649,nssv727425,nssv727092,nssv726882,nssv727645,nssv726880,nssv727424,nssv726879,nssv726878,nssv727648,nssv727432,nssv727091,nssv726881,nssv727647,nssv727431,nssv727430,nssv727427,nssv727426,nssv727429,nssv727428,nssv727138,nssv726571,nssv726897,nssv726565,nssv727436,nssv727662,nssv727661,nssv727652,nssv727655,nssv726885,nssv727441,nssv726886,nssv726574,nssv726660,nssv727128,nssv727120,nssv726889,nssv727098,nssv727451,nssv726909,nssv726890,nssv726888,nssv726887,nssv726891,nssv727440,nssv727654,nssv727121,nssv727437,nssv726896,nssv727127,nssv727122,nssv726892,nssv727653,nssv726895,nssv727439,nssv727126,nssv727125,nssv727438,nssv726893,nssv727124,nssv726894,nssv727123,nssv726573,nssv727137,nssv727446,nssv727659,nssv726898,nssv727660,nssv727131,nssv726577,nssv726902,nssv726901,nssv727129,nssv727445,nssv727442,nssv726908,nssv727130,nssv727444,nssv726900,nssv726899,nssv727443,nssv726903,nssv727136,nssv726572,nssv727657,nssv727658,nssv726576,nssv726907,nssv727448,nssv727449,nssv727450,nssv726575,nssv727656,nssv727447,nssv726906,nssv727135,nssv727132,nssv727134,nssv726905,nssv726904,nssv727133 M 17421 0 1105 "" nsv548051 1 157915415 157919563 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727670 M 17421 0 1 "" nsv825076 1 157949710 157950757 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431849 M 31 0 1 CRP AK20 nsv475353 1 157990156 157990156 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011780 M 9 1 0 "" NA19240 esv33491 1 158015148 158015476 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv92780 M 51 1 0 "" 21944 nsv521503 1 158028744 158062102 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698120 M 2026 0 1 FCRL6 esv991387 1 158040204 158042388 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564917 M 3 1 0 FCRL6 HuRef nsv464150 1 158127541 158175017 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540120 M 1557 1 0 CCDC19,IGSF9,TAGLN2 HGDP00473 nsv548052 1 158127541 158175017 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173214 M 17421 1 0 CCDC19,IGSF9,TAGLN2 HGDP00473 nsv548053 1 158152124 158175017 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727671 M 17421 0 1 IGSF9,TAGLN2 nsv524006 1 158153046 158189735 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699866 M 2026 1 0 IGSF9,SLAMF9,TAGLN2 nsv946451 1 158154705 158156742 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803454,nssv1803417,nssv1803455,nssv1803430,nssv1803386,nssv1803465,nssv1803459,nssv1803427,nssv1803385,nssv1803376,nssv1803393,nssv1803447,nssv1803398,nssv1803446,nssv1803405,nssv1803440,nssv1803389,nssv1803439,nssv1803382,nssv1803434,nssv1803396,nssv1803438,nssv1803378,nssv1803422,nssv1803458,nssv1803425,nssv1803390,nssv1803436,nssv1803388,nssv1803464,nssv1803457,nssv1803402,nssv1803381,nssv1803472,nssv1803401,nssv1803452,nssv1803404,nssv1803412,nssv1803395,nssv1803410,nssv1803453,nssv1803429,nssv1803461,nssv1803444,nssv1803394,nssv1803431,nssv1803384,nssv1803463,nssv1803380,nssv1803442,nssv1803460,nssv1803435,nssv1803379,nssv1803399,nssv1803456,nssv1803449,nssv1803392,nssv1803450,nssv1803391,nssv1803415,nssv1803397,nssv1803423,nssv1803407,nssv1803466,nssv1803462,nssv1803424,nssv1803377,nssv1803416,nssv1803383,nssv1803448,nssv1803400,nssv1803451,nssv1803387,nssv1803469,nssv1803406,nssv1803437,nssv1803426,nssv1803445,nssv1803403,nssv1803470,nssv1803421,nssv1803419,nssv1803414,nssv1803443,nssv1803432,nssv1803411,nssv1803408,nssv1803428,nssv1803468,nssv1803467,nssv1803471,nssv1803420,nssv1803418,nssv1803433,nssv1803441,nssv1803409,nssv1803413 M 97 10 0 TAGLN2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv516637 1 158156310 158175017 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv669784,nssv703037,nssv655349 M 2026 0 3 IGSF9,TAGLN2 nsv548054 1 158162603 158174065 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727672 M 17421 0 1 IGSF9 nsv548055 1 158185042 158206624 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727673 M 17421 0 1 LINC01133,SLAMF9 nsv520773 1 158189583 158202193 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698947,nssv679916,nssv675248 M 2026 0 3 LINC01133,SLAMF9 nsv946452 1 158210052 158210906 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803479,nssv1804161,nssv1803489,nssv1804136,nssv1804492,nssv1804164,nssv1804494,nssv1804165,nssv1803487,nssv1804157,nssv1803490,nssv1804130,nssv1804172,nssv1803473,nssv1804174,nssv1804153,nssv1803477,nssv1804124,nssv1804168,nssv1804154,nssv1803483,nssv1804127,nssv1804167,nssv1804160,nssv1803482,nssv1804159,nssv1803478,nssv1804123,nssv1803480,nssv1804150,nssv1803485,nssv1804126,nssv1804495,nssv1804129,nssv1803488,nssv1804183,nssv1804171,nssv1804179,nssv1804489,nssv1804496,nssv1804121,nssv1804184,nssv1803475,nssv1804146,nssv1803491,nssv1804133,nssv1804490,nssv1804151,nssv1803481,nssv1804158,nssv1803486,nssv1804137,nssv1804498,nssv1804182,nssv1804499,nssv1804143,nssv1804173,nssv1804163,nssv1804170,nssv1804155,nssv1803476,nssv1804145,nssv1803474,nssv1804139,nssv1804176,nssv1804148,nssv1804491,nssv1804500,nssv1804175,nssv1804140,nssv1803484,nssv1804186,nssv1804169,nssv1804122,nssv1804178,nssv1804147,nssv1804497,nssv1804142,nssv1804185,nssv1804134,nssv1804132,nssv1804166,nssv1804181,nssv1804149,nssv1804128,nssv1804177,nssv1804144,nssv1804141,nssv1804125,nssv1804156,nssv1804131,nssv1804152,nssv1804162,nssv1804180,nssv1804135,nssv1804493,nssv1804138 M 97 10 0 LINC01133 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv159498 1 158213376 158213427 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178076 M 24 LINC01133 nsv1012752 1 158229089 158255942 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492975 M 29084 0 1 "" dgv446n100 1 158229089 158256552 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007787,nsv1000569 M 29084 2 0 "" esv2762195 1 158267059 158276775 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006606 M 1109 0 1 KCNJ10,PIGM RW_0048 nsv3199 1 158269520 158300919 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4748 M 9 1 0 KCNJ10 NA19129 nsv520189 1 158278136 158362249 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv661554,nssv705109,nssv688598 M 2026 0 3 ATP1A2,IGSF8,KCNJ10,KCNJ9 esv7386 1 158279932 158280098 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29827 M 1 0 0 KCNJ10 nsv508041 1 158309005 158315005 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621481,nssv624221 M 4 0 0 "" NA15510,NA18994 esv1751918 1 158314309 158314309 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3675887 M 2 1 0 "" HuRef nsv520399 1 158390405 158391499 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697393 M 2026 0 1 ATP1A4 nsv522918 1 158390405 158416754 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698579 M 2026 0 1 ATP1A4 esv2761950 1 158394742 158430261 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7001555 M 1109 1 0 ATP1A4,CASQ1 SW_0623 nsv819332 1 158418318 158419818 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419276 M 2 0 1 ATP1A4 AK1 nsv3210 1 158489465 158534444 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4759 M 9 0 1 COPA,DCAF8,PEX19 NA19129 nsv946453 1 158502236 158512674 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804204,nssv1804258,nssv1804212,nssv1804276,nssv1804197,nssv1804248,nssv1804200,nssv1804235,nssv1804203,nssv1804213,nssv1804211,nssv1804236,nssv1804265,nssv1804250,nssv1804194,nssv1804221,nssv1804209,nssv1804228,nssv1804193,nssv1804254,nssv1804264,nssv1804261,nssv1804189,nssv1804262,nssv1804269,nssv1804224,nssv1804268,nssv1804259,nssv1804206,nssv1804214,nssv1804198,nssv1804281,nssv1804272,nssv1804256,nssv1804196,nssv1804257,nssv1804192,nssv1804251,nssv1804202,nssv1804227,nssv1804199,nssv1804217,nssv1804205,nssv1804233,nssv1804201,nssv1804223,nssv1804195,nssv1804247,nssv1804271,nssv1804243,nssv1804215,nssv1804278,nssv1804191,nssv1804230,nssv1804216,nssv1804255,nssv1804270,nssv1804277,nssv1804267,nssv1804279,nssv1804218,nssv1804234,nssv1804208,nssv1804282,nssv1804188,nssv1804260,nssv1804273,nssv1804280,nssv1804190,nssv1804249,nssv1804207,nssv1804240,nssv1804266,nssv1804222,nssv1804187,nssv1804283,nssv1804245,nssv1804226,nssv1804239,nssv1804237,nssv1804219,nssv1804244,nssv1804275,nssv1804263,nssv1804210,nssv1804242,nssv1804232,nssv1804225,nssv1804231,nssv1804246,nssv1804274,nssv1804238,nssv1804220,nssv1804253,nssv1804241,nssv1804252,nssv1804229 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3308421 1 158528081 158528082 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841605,essv7842909 M 185 2 0 COPA NA19239,NA19240 esv3334227 1 158528083 158528102 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678339 M 185 1 0 COPA NA19240 esv3361989 1 158528087 158528095 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673779,essv8673778 M 185 2 0 COPA NA19239,NA19240 nsv946454 1 158550308 158554724 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804289,nssv1804319,nssv1804291,nssv1804317,nssv1804297,nssv1804310,nssv1804300,nssv1804320,nssv1804301,nssv1804326,nssv1804294,nssv1804338,nssv1804308,nssv1804328,nssv1804306,nssv1804374,nssv1804299,nssv1804332,nssv1804309,nssv1804314,nssv1804368,nssv1804329,nssv1804290,nssv1804349,nssv1804367,nssv1804351,nssv1804369,nssv1804355,nssv1804295,nssv1804359,nssv1804303,nssv1804358,nssv1804365,nssv1804322,nssv1804361,nssv1804333,nssv1804362,nssv1804378,nssv1804363,nssv1804325,nssv1804292,nssv1804356,nssv1804296,nssv1804353,nssv1804302,nssv1804346,nssv1804287,nssv1804324,nssv1804288,nssv1804321,nssv1804286,nssv1804347,nssv1804312,nssv1804318,nssv1804293,nssv1804311,nssv1804366,nssv1804354,nssv1804285,nssv1804348,nssv1804298,nssv1804345,nssv1804313,nssv1804337,nssv1804364,nssv1804316,nssv1804304,nssv1804344,nssv1804305,nssv1804331,nssv1804370,nssv1804376,nssv1804315,nssv1804373,nssv1804357,nssv1804334,nssv1804340,nssv1804352,nssv1804284,nssv1804375,nssv1804327,nssv1804380,nssv1804342,nssv1804360,nssv1804372,nssv1804323,nssv1804377,nssv1804307,nssv1804336,nssv1804341,nssv1804330,nssv1804371,nssv1804339,nssv1804335,nssv1804343,nssv1804379,nssv1804350 M 97 10 0 COPA,SUMO1P3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548056 1 158600366 158658778 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727674 M 17421 0 1 NHLH1,VANGL2 nsv1014588 1 158664964 158688284 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704746 M 29084 0 1 VANGL2 esv3443241 1 158686261 158686275 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863772 M 185 1 0 "" NA12005 esv2566827 1 158703334 158704749 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5366828 M 1 0 1 "" NA18507 nsv831703 1 158762748 158909648 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450873 M 95 1 0 CD84,SLAMF1 esv3310327 1 158767514 158767515 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838522,essv7837533 M 185 2 0 "" NA19238,NA19240 esv3426878 1 158767516 158767538 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673780,essv8673781 M 185 2 0 "" NA19238,NA19240 nsv831714 1 158847792 159043433 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1450884 M 95 1 0 CD48,LY9,SLAMF1,SLAMF7 nsv511001 1 158897781 158935223 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624365,nssv622427,nssv621657 M 4 0 0 CD48 NA10860,NA15510,NA18994 nsv946455 1 158906823 158908533 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804406,nssv1805141,nssv1805155,nssv1805108,nssv1804397,nssv1805110,nssv1804405,nssv1805159,nssv1805148,nssv1805162,nssv1804394,nssv1805142,nssv1804398,nssv1805112,nssv1804401,nssv1805139,nssv1804388,nssv1805127,nssv1804383,nssv1805115,nssv1804392,nssv1805130,nssv1804391,nssv1805119,nssv1805154,nssv1805134,nssv1804396,nssv1805118,nssv1805149,nssv1805163,nssv1805152,nssv1805166,nssv1804384,nssv1804407,nssv1804387,nssv1805113,nssv1804400,nssv1804414,nssv1804385,nssv1805107,nssv1805151,nssv1805125,nssv1805147,nssv1805131,nssv1804403,nssv1805128,nssv1805153,nssv1805157,nssv1804399,nssv1805129,nssv1804386,nssv1805146,nssv1804393,nssv1805158,nssv1804389,nssv1805136,nssv1804410,nssv1805164,nssv1804409,nssv1805111,nssv1804395,nssv1804415,nssv1804382,nssv1805138,nssv1805150,nssv1805132,nssv1804402,nssv1805165,nssv1804390,nssv1805123,nssv1805156,nssv1804411,nssv1804412,nssv1805143,nssv1805135,nssv1805161,nssv1804408,nssv1805160,nssv1804381,nssv1805137,nssv1805116,nssv1805144,nssv1805120,nssv1805122,nssv1805145,nssv1805140,nssv1805126,nssv1805133,nssv1805114,nssv1805106,nssv1805105,nssv1805121,nssv1805117,nssv1805124,nssv1804404,nssv1804413,nssv1805109 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv506962 1 158909890 158915890 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617543 M 4 0 0 CD48 CHM nsv437213 1 158919354 158948460 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467094 M 60 0 1 CD48 NA12707 nsv508042 1 158919572 158925572 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618511 M 4 0 0 CD48 CHM esv2461296 1 158972240 158973718 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5194477 M 1 0 1 "" NA18507 nsv548057 1 159014239 159118670 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727675 M 17421 0 1 CD244,ITLN1,LY9 nsv825087 1 159059776 159060604 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437971 M 31 0 1 LY9 NA18951 dgv84n67 1 159060022 159060699 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825120,nsv825143,nsv825109,nsv825131,nsv825098 M 31 0 5 LY9 NA18526,NA18537,NA18564,NA18570,NA18969 nsv946456 1 159079274 159091303 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805170,nssv1805220,nssv1805171,nssv1805256,nssv1805174,nssv1805260,nssv1805173,nssv1805194,nssv1805183,nssv1805235,nssv1805184,nssv1805208,nssv1805191,nssv1805239,nssv1805252,nssv1805236,nssv1805180,nssv1805230,nssv1805249,nssv1805214,nssv1805189,nssv1805206,nssv1805251,nssv1805240,nssv1805245,nssv1805263,nssv1805182,nssv1805207,nssv1805196,nssv1805216,nssv1805186,nssv1805224,nssv1805177,nssv1805205,nssv1805248,nssv1805227,nssv1805244,nssv1805215,nssv1805178,nssv1805213,nssv1805185,nssv1805231,nssv1805246,nssv1805226,nssv1805187,nssv1805202,nssv1805175,nssv1805212,nssv1805198,nssv1805238,nssv1805179,nssv1805261,nssv1805247,nssv1805197,nssv1805195,nssv1805233,nssv1805172,nssv1805259,nssv1805168,nssv1805255,nssv1805169,nssv1805218,nssv1805181,nssv1805254,nssv1805192,nssv1805167,nssv1805250,nssv1805243,nssv1805176,nssv1805222,nssv1805253,nssv1805229,nssv1805188,nssv1805258,nssv1805209,nssv1805210,nssv1805223,nssv1805225,nssv1805199,nssv1805190,nssv1805257,nssv1805262,nssv1805234,nssv1805201,nssv1805204,nssv1805241,nssv1805232,nssv1805200,nssv1805242,nssv1805217,nssv1805211,nssv1805219,nssv1805193,nssv1805228,nssv1805237,nssv1805203,nssv1805221 M 97 10 0 CD244 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946457 1 159117146 159118796 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805268,nssv1805310,nssv1805271,nssv1802585,nssv1805273,nssv1805321,nssv1805280,nssv1805304,nssv1805281,nssv1802612,nssv1805274,nssv1805316,nssv1805288,nssv1802587,nssv1805293,nssv1805308,nssv1802607,nssv1802589,nssv1802604,nssv1805300,nssv1802601,nssv1802616,nssv1802599,nssv1802597,nssv1802603,nssv1805318,nssv1805277,nssv1805303,nssv1805266,nssv1805322,nssv1805284,nssv1802586,nssv1805279,nssv1805325,nssv1805283,nssv1805299,nssv1805289,nssv1805291,nssv1805275,nssv1805302,nssv1805282,nssv1802613,nssv1805286,nssv1805313,nssv1802605,nssv1805309,nssv1802606,nssv1805312,nssv1805276,nssv1805323,nssv1802602,nssv1805294,nssv1805272,nssv1805324,nssv1802608,nssv1805264,nssv1805265,nssv1802617,nssv1805292,nssv1802590,nssv1805269,nssv1802611,nssv1805295,nssv1802614,nssv1805267,nssv1805319,nssv1805270,nssv1802615,nssv1805278,nssv1802618,nssv1802600,nssv1805307,nssv1805285,nssv1805297,nssv1805326,nssv1805311,nssv1802595,nssv1802591,nssv1805296,nssv1805317,nssv1805287,nssv1802594,nssv1805298,nssv1805305,nssv1805315,nssv1802588,nssv1805301,nssv1802610,nssv1802596,nssv1802609,nssv1802598,nssv1805306,nssv1805314,nssv1805320,nssv1802593,nssv1802592,nssv1805290 M 97 10 0 ITLN1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946459 1 159131489 159136760 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802667,nssv1802635,nssv1802666,nssv1802631,nssv1802642,nssv1802636,nssv1802619,nssv1802621,nssv1802693,nssv1802703,nssv1802670,nssv1802633,nssv1802715,nssv1802647,nssv1802709,nssv1802624,nssv1802681,nssv1802625,nssv1802686,nssv1802630,nssv1802682,nssv1802628,nssv1802684,nssv1802644,nssv1802660,nssv1802632,nssv1802694,nssv1802702,nssv1802653,nssv1802696,nssv1802713,nssv1802638,nssv1802690,nssv1802650,nssv1802712,nssv1802701,nssv1802665,nssv1802698,nssv1802668,nssv1802627,nssv1802683,nssv1802629,nssv1802672,nssv1802637,nssv1802711,nssv1802704,nssv1802714,nssv1802634,nssv1802645,nssv1802626,nssv1802652,nssv1802623,nssv1802708,nssv1802620,nssv1802679,nssv1802648,nssv1802695,nssv1802699,nssv1802678,nssv1802640,nssv1802675,nssv1802639,nssv1802689,nssv1802705,nssv1802710,nssv1802641,nssv1802692,nssv1802700,nssv1802656,nssv1802697,nssv1802680,nssv1802622,nssv1802671,nssv1802643,nssv1802658,nssv1802669,nssv1802662,nssv1802687,nssv1802688,nssv1802676,nssv1802646,nssv1802677,nssv1802674,nssv1802663,nssv1802651,nssv1802691,nssv1802657,nssv1802707,nssv1802664,nssv1802649,nssv1802654,nssv1802685,nssv1802661,nssv1802706,nssv1802673,nssv1802659,nssv1802655 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3347128 1 159137373 159138132 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808925 M 185 1 0 "" NA12878 nsv548058 1 159192079 159256238 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727676 M 17421 0 1 F11R esv2642468 1 159201024 159203025 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5318670 M 1 0 1 "" NA18507 esv8875 1 159201393 159202202 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31316 M 1 0 0 "" esv2238307 1 159201456 159202119 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4856582 M 1 0 1 "" NA18507 esv4267 1 159201587 159202011 CNV loss Wang_et_al_2008 18987735 Sequencing essv26708 M 1 0 1 "" YH dgv1e197 1 159201645 159201972 CNV deletion McKernan_et_al_2009 19546169 Sequencing esv2440075,esv2488948 M 1 0 1 "" NA18507 esv1244897 1 159201659 159201975 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3624711 M 2 0 1 "" HuRef esv1241558 1 159213176 159213254 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3842593 M 2 0 1 "" HuRef esv25590 1 159220366 159227233 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10894 M 40 0 2 "" NA18511,NA18909 esv1107448 1 159221089 159221089 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3753276 M 2 1 0 "" HuRef esv2541280 1 159221307 159222909 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5290524 M 1 0 1 "" NA18507 esv1635079 1 159221474 159221785 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3911565 M 2 0 1 "" HuRef esv2542383 1 159271716 159272654 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5178281 M 1 1 0 "" NA18507 esv1080531 1 159272308 159272308 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4360781 M 2 1 0 "" HuRef nsv548059 1 159273950 159277415 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727677 M 17421 1 0 TSTD1,USF1 nsv3221 1 159274799 159319603 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7736 M 9 0 1 ARHGAP30,PVRL4,TSTD1,USF1 NA12156 nsv3232 1 159284457 159286704 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2693 M 9 1 0 ARHGAP30 NA18555 esv988172 1 159318542 159322132 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565420 M 3 0 1 PVRL4 HuRef esv3351730 1 159323352 159325150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691996 M 185 1 0 PVRL4 NA19239 esv32799 1 159428462 159438144 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv98925 M 51 1 0 ADAMTS4,NDUFS2 21606 esv3451610 1 159451314 159451317 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740940 M 185 1 0 "" NA19240 nsv482136 1 159451711 159455662 CNV loss Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558497 M 1 0 1 FCER1G KB1 nsv523318 1 159499396 159501507 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699060 M 2026 0 1 PCP4L1 nsv520253 1 159501247 159504516 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697309 M 2026 0 1 PCP4L1 esv1486999 1 159518177 159518251 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3648136 M 2 0 1 PCP4L1 HuRef nsv525443 1 159530004 159540935 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701571 M 2026 0 1 "" nsv517826 1 159530004 159544225 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695231 M 2026 1 0 MPZ nsv1010776 1 159549008 159675842 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490889 M 29084 1 0 C1orf192,SDHC nsv946460 1 159595904 159599428 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802741,nssv1802770,nssv1802736,nssv1802761,nssv1802801,nssv1802778,nssv1802747,nssv1802758,nssv1802733,nssv1802752,nssv1802726,nssv1802790,nssv1802744,nssv1802754,nssv1802728,nssv1802751,nssv1802730,nssv1802767,nssv1802722,nssv1802786,nssv1802729,nssv1802803,nssv1802721,nssv1802748,nssv1802797,nssv1802739,nssv1802799,nssv1802791,nssv1802798,nssv1802764,nssv1802793,nssv1802806,nssv1802735,nssv1802750,nssv1802734,nssv1802757,nssv1802745,nssv1802781,nssv1802738,nssv1802749,nssv1802724,nssv1802779,nssv1802794,nssv1802783,nssv1802795,nssv1802810,nssv1802737,nssv1802809,nssv1802727,nssv1802762,nssv1802718,nssv1802765,nssv1802717,nssv1802811,nssv1802720,nssv1802756,nssv1802719,nssv1802769,nssv1802796,nssv1802792,nssv1802723,nssv1802776,nssv1802732,nssv1802789,nssv1802800,nssv1802780,nssv1802731,nssv1802807,nssv1802725,nssv1802808,nssv1802802,nssv1802755,nssv1802740,nssv1802716,nssv1802763,nssv1802753,nssv1802812,nssv1802742,nssv1802805,nssv1802775,nssv1802772,nssv1802759,nssv1802774,nssv1802784,nssv1802785,nssv1802777,nssv1802766,nssv1802788,nssv1802771,nssv1802787,nssv1802743,nssv1802773,nssv1802768,nssv1802760,nssv1802782,nssv1802804,nssv1802746 M 97 10 0 SDHC HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2758972 1 159610879 159948176 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756866,esv2757757 M 270 28 53 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,FCRLA,HSPA6,HSPA7,RPL31P11 NA06991,NA06994,NA07019,NA07022,NA07048,NA10831,NA10839,NA10846,NA10851,NA10859,NA10863,NA11840,NA11882,NA12005,NA12057,NA12145,NA12234,NA12264,NA12750,NA12753,NA12762,NA12801,NA12813,NA12814,NA12864,NA18501,NA18502,NA18503,NA18504,NA18515,NA18517,NA18529,NA18532,NA18540,NA18547,NA18555,NA18558,NA18564,NA18571,NA18573,NA18577,NA18579,NA18582,NA18592,NA18603,NA18853,NA18855,NA18857,NA18858,NA18861,NA18912,NA18913,NA18914,NA18949,NA18956,NA18960,NA18967,NA18970,NA18974,NA18981,NA18987,NA18995,NA18998,NA18999,NA19101,NA19102,NA19103,NA19129,NA19131,NA19132,NA19144,NA19154,NA19159,NA19203,NA19205,NA19206,NA19209,NA19210,NA19211,NA19222,NA19223 nsv825154 1 159611329 159613322 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434202 M 31 0 1 "" NA18570 nsv998957 1 159619975 159665038 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499681 M 29084 1 0 "" nsv946461 1 159639129 159651571 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802842,nssv1802836,nssv1802829,nssv1803828,nssv1803822,nssv1803805,nssv1802830,nssv1802865,nssv1803821,nssv1802863,nssv1802833,nssv1803830,nssv1803823,nssv1802870,nssv1802816,nssv1802849,nssv1803815,nssv1802848,nssv1802819,nssv1802845,nssv1802825,nssv1802855,nssv1803820,nssv1802851,nssv1802827,nssv1803826,nssv1802818,nssv1803832,nssv1802841,nssv1802867,nssv1802844,nssv1802857,nssv1803818,nssv1803829,nssv1802832,nssv1803806,nssv1803814,nssv1803809,nssv1802824,nssv1802858,nssv1802831,nssv1803833,nssv1802821,nssv1802813,nssv1803816,nssv1803813,nssv1802835,nssv1802847,nssv1802838,nssv1803810,nssv1802817,nssv1802875,nssv1802814,nssv1802864,nssv1802828,nssv1802861,nssv1802820,nssv1803802,nssv1803817,nssv1803807,nssv1802834,nssv1803825,nssv1802822,nssv1802859,nssv1803819,nssv1803808,nssv1802826,nssv1802862,nssv1802823,nssv1802846,nssv1802815,nssv1802854,nssv1802837,nssv1803801,nssv1802840,nssv1803800,nssv1803811,nssv1803803,nssv1803824,nssv1802853,nssv1802869,nssv1802866,nssv1802871,nssv1803812,nssv1803827,nssv1802860,nssv1802850,nssv1802839,nssv1803831,nssv1802856,nssv1802873,nssv1802874,nssv1802868,nssv1802852,nssv1802872,nssv1803804,nssv1802843 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3243 1 159658059 159743517 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1635,nssv10301,nssv10294,nssv4777 M 9 0 3 FCGR2A NA18956,NA19129,NA19240 nsv509535 1 159663848 159737721 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619817,nssv623802,nssv621105 M 4 3 0 "" NA10860,NA15510,NA18994 nsv3254 1 159664506 159679557 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7097,nssv10296,nssv4769 M 9 3 0 "" NA12156,NA18956,NA19129 dgv4n68 1 159669654 159933356 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nsv831736,nsv831725 M 95 3 2 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7,RPL31P11 nsv428257 1 159672939 160134887 CNV loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv452308,nssv451997,nssv452219,nssv452286,nssv452319,nssv452275,nssv452164,nssv452264,nssv452131,nssv452020,nssv452119,nssv452186,nssv452297,nssv452008,nssv452230,nssv452197,nssv452142,nssv452153,nssv452175,nssv452208,nssv452108,nssv452253,nssv452242 M 62 0 23 ATF6,DUSP12,FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,FCRLA,FCRLB,HSPA6,HSPA7,RPL31P11 HGDP00449,HGDP00450,HGDP00460,HGDP00467,HGDP00471,HGDP00472,HGDP00473,HGDP00984,HGDP00986,HGDP01086,HGDP01087,HGDP01088,HGDP01089,HGDP01093,HGDP01094,NA18498,NA18916,NA19096,NA19108,NA19113,NA19147,NA19189,NA19257 nsv820819 1 159675172 159717780 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420713 M 1 1 0 "" NA10851 esv28122 1 159675687 159913382 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15123,esv21308,esv12861,esv18665 M 40 7 18 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 NA06985,NA07037,NA07045,NA11894,NA11993,NA12004,NA12489,NA12749,NA12776,NA18517,NA18523,NA18858,NA18861,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19257 nsv825165 1 159676257 159717780 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432396 M 31 1 0 "" NA18972 dgv218e59 1 159677052 159709150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3451840,esv3383739,esv3424752,esv3359978,esv3435547,esv3344166 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv8491 1 159677103 159718880 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv23678,nssv22760,nssv21774,nssv21766,nssv20411,nssv20741,nssv22434,nssv20101,nssv20431,nssv25454,nssv22432,nssv20761,nssv21091,nssv21421,nssv23979,nssv25713,nssv21401,nssv21781,nssv22762,nssv24563,nssv22111,nssv27522,nssv22104,nssv23379,nssv22441,nssv27840,nssv27632,nssv21071,nssv27740,nssv23078,nssv22429,nssv24273,nssv23388,nssv21777 M 31 4 8 "" NA07029,NA12872,NA18504,NA18552,NA18564,NA18572,NA18942,NA18972,NA18975,NA19132,NA19240 esv1005357 1 159677147 159709073 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586678 M 3 0 1 "" HuRef nsv514914 1 159680016 159717968 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2852211,nssv2851073,nssv2852209,nssv2851074,nssv2852216,nssv2851075,nssv2852203,nssv2851076,nssv2852207,nssv2850209,nssv2852225,nssv2850129,nssv2852231,nssv2849975,nssv2852202,nssv2850164,nssv2852232,nssv2850074,nssv2852221,nssv2850119,nssv2852194,nssv2850082,nssv2852228,nssv2850161,nssv2852224,nssv2850043,nssv2852190,nssv2850162,nssv2852193,nssv2850085,nssv2852205,nssv2850150,nssv2852230,nssv2850192,nssv2852196,nssv2850188,nssv2852192,nssv2850181,nssv2852213,nssv2850009,nssv2852206,nssv2850189,nssv2852186,nssv2848837,nssv2852189,nssv2850238,nssv2852227,nssv2850177,nssv2852191,nssv2850003,nssv2852208,nssv2850176,nssv2852197,nssv2850018,nssv2852214,nssv2850145,nssv2852217,nssv2850078,nssv2852212,nssv2850257,nssv2852187,nssv2850124,nssv2852220,nssv2850032,nssv2852233,nssv2849988,nssv2852219,nssv2850084,nssv2852223,nssv2851052,nssv2852218,nssv2848797,nssv2852198,nssv2848822,nssv2852222,nssv2850059,nssv2852215,nssv2850076,nssv2852226,nssv2850023,nssv2852229,nssv2848851,nssv2852200,nssv2850236,nssv2852201,nssv2850093,nssv2852195,nssv2850216,nssv2852210,nssv2848827,nssv2852188,nssv2848808,nssv2852204,nssv2848836,nssv2852199,nssv2850187,nssv2850266,nssv2848833,nssv2850237,nssv2850166,nssv2850267,nssv2848809,nssv2848799,nssv2851064,nssv2850288,nssv2850298,nssv2851048,nssv2850065,nssv2850010,nssv2850304,nssv2850227,nssv2848832,nssv2850149,nssv2848838,nssv2848858,nssv2848796,nssv2850200,nssv2850163,nssv2850299,nssv2850071,nssv2850075,nssv2850011,nssv2851058,nssv2850020,nssv2850303,nssv2850133,nssv2850210,nssv2850230,nssv2850013,nssv2851053,nssv2850174,nssv2850151,nssv2850131,nssv2850278,nssv2850282,nssv2848863,nssv2848803,nssv2850258,nssv2850286,nssv2849981,nssv2850168,nssv2848820,nssv2850301,nssv2850226,nssv2850147,nssv2850260,nssv2850123,nssv2848840,nssv2851056,nssv2850270,nssv2848810,nssv2848862,nssv2848794,nssv2849973,nssv2850222,nssv2850212,nssv2848845,nssv2851060,nssv2848841,nssv2848846,nssv2850268,nssv2848811,nssv2850184,nssv2850175,nssv2848855,nssv2850211,nssv2850167,nssv2850066,nssv2850194,nssv2850054,nssv2850169,nssv2850138,nssv2849979,nssv2850102,nssv2850034,nssv2850276,nssv2850106,nssv2850302,nssv2850252,nssv2850021,nssv2850232,nssv2849997,nssv2850098,nssv2850159,nssv2848824,nssv2848806,nssv2848828,nssv2850198,nssv2850305,nssv2850089,nssv2850289,nssv2850029,nssv2850229,nssv2851044,nssv2851077,nssv2850019,nssv2850024,nssv2850233,nssv2850158,nssv2850040,nssv2850036,nssv2851069,nssv2851050,nssv2850130,nssv2850290,nssv2850068,nssv2850090,nssv2850081,nssv2850253,nssv2851057,nssv2850027,nssv2848807,nssv2850160,nssv2850063,nssv2850037,nssv2848835,nssv2850215,nssv2851070,nssv2850250,nssv2850274,nssv2849978,nssv2848805,nssv2848814,nssv2850203,nssv2850088,nssv2850154,nssv2850220,nssv2850249,nssv2850165,nssv2850185,nssv2850052,nssv2850091,nssv2851071,nssv2851063,nssv2850195,nssv2850028,nssv2849993,nssv2850117,nssv2850172,nssv2850296,nssv2848819,nssv2850179,nssv2850001,nssv2850243,nssv2850116,nssv2849999,nssv2849985,nssv2850104,nssv2851051,nssv2850254,nssv2850221,nssv2850026,nssv2848800,nssv2850046,nssv2850173,nssv2849996,nssv2850146,nssv2850006,nssv2850114,nssv2850242,nssv2850092,nssv2850264,nssv2848842,nssv2850155,nssv2848815,nssv2848859,nssv2850067,nssv2848813,nssv2850109,nssv2850072,nssv2849986,nssv2851045,nssv2850135,nssv2850017,nssv2850025,nssv2851066,nssv2850035,nssv2850247,nssv2850223,nssv2850263,nssv2850207,nssv2850061,nssv2851072,nssv2850297,nssv2850287,nssv2850273,nssv2850134,nssv2851061,nssv2848843,nssv2850047,nssv2850045,nssv2850171,nssv2850044,nssv2848854,nssv2848850,nssv2848857,nssv2848804,nssv2850041,nssv2850283,nssv2849972,nssv2849974,nssv2850050,nssv2850080,nssv2850291,nssv2850183,nssv2850094,nssv2850096,nssv2850077,nssv2850111,nssv2850214,nssv2850000,nssv2850137,nssv2850070,nssv2851049,nssv2851046,nssv2850064,nssv2850251,nssv2850284,nssv2850069,nssv2850234,nssv2850280,nssv2851065,nssv2850259,nssv2850128,nssv2849980,nssv2850240,nssv2850127,nssv2850279,nssv2850208,nssv2850272,nssv2850008,nssv2850056,nssv2851054,nssv2850062,nssv2850292,nssv2850156,nssv2850038,nssv2850060,nssv2850152,nssv2850191,nssv2849992,nssv2850033,nssv2850110,nssv2850262,nssv2848831,nssv2850182,nssv2848816,nssv2850205,nssv2850204,nssv2850153,nssv2850022,nssv2848830,nssv2848852,nssv2850141,nssv2848834,nssv2850118,nssv2850180,nssv2849989,nssv2850007,nssv2850213,nssv2850295,nssv2850058,nssv2849995,nssv2850030,nssv2850281,nssv2848856,nssv2850224,nssv2848802,nssv2848847,nssv2848849,nssv2850193,nssv2850186,nssv2850125,nssv2848853,nssv2850103,nssv2850031,nssv2850241,nssv2850206,nssv2850112,nssv2850170,nssv2850107,nssv2849994,nssv2850255,nssv2848801,nssv2850099,nssv2850294,nssv2849971,nssv2850271,nssv2850140,nssv2850097,nssv2850049,nssv2850218,nssv2849977,nssv2848844,nssv2850108,nssv2850015,nssv2850196,nssv2850239,nssv2850051,nssv2850002,nssv2850139,nssv2850157,nssv2850079,nssv2848860,nssv2849991,nssv2850100,nssv2848812,nssv2850261,nssv2850120,nssv2850042,nssv2850039,nssv2850244,nssv2848848,nssv2849998,nssv2850057,nssv2849976,nssv2850300,nssv2850235,nssv2850087,nssv2850246,nssv2850265,nssv2850101,nssv2852185,nssv2850245,nssv2850143,nssv2850202,nssv2850126,nssv2850201,nssv2850048,nssv2848823,nssv2850012,nssv2850199,nssv2849987,nssv2849990,nssv2850014,nssv2850277,nssv2850217,nssv2850121,nssv2850053,nssv2850248,nssv2850086,nssv2850105,nssv2849983,nssv2850004,nssv2849984,nssv2850055,nssv2850269,nssv2848798,nssv2851068,nssv2850190,nssv2851055,nssv2850073,nssv2848825,nssv2850115,nssv2848818,nssv2850231,nssv2849982,nssv2850142,nssv2850144,nssv2850113,nssv2850016,nssv2850197,nssv2848817,nssv2850005,nssv2850136,nssv2850083,nssv2851067,nssv2850122,nssv2851059,nssv2848821,nssv2848795,nssv2848861,nssv2850178,nssv2850225,nssv2850148,nssv2848829,nssv2850256,nssv2850095,nssv2850219,nssv2848839,nssv2850285,nssv2848826,nssv2851047,nssv2850132,nssv2850275,nssv2850293,nssv2851062,nssv2850228 M 2366 488 0 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv3265 1 159681573 159704172 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1628,nssv3453,nssv2587 M 9 3 0 "" NA12878,NA18555,NA19240 nsv946462 1 159681693 159708631 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803847,nssv1803895,nssv1803840,nssv1803861,nssv1803844,nssv1803922,nssv1803850,nssv1803873,nssv1803856,nssv1803885,nssv1803846,nssv1803866,nssv1803853,nssv1803890,nssv1803851,nssv1803877,nssv1803918,nssv1803864,nssv1803843,nssv1803926,nssv1803836,nssv1803923,nssv1803865,nssv1803878,nssv1803838,nssv1803902,nssv1803841,nssv1803886,nssv1803837,nssv1803892,nssv1803849,nssv1803903,nssv1803835,nssv1803884,nssv1803915,nssv1803930,nssv1803911,nssv1803872,nssv1803839,nssv1803899,nssv1803917,nssv1803907,nssv1803852,nssv1803868,nssv1803912,nssv1803857,nssv1803862,nssv1803929,nssv1803842,nssv1803882,nssv1803848,nssv1803834,nssv1803919,nssv1803891,nssv1803859,nssv1803876,nssv1803914,nssv1803906,nssv1803845,nssv1803869,nssv1803858,nssv1803901,nssv1803854,nssv1803887,nssv1803913,nssv1803875,nssv1803916,nssv1803883,nssv1803855,nssv1803893,nssv1803863,nssv1803910,nssv1803920,nssv1803874,nssv1803860,nssv1803888,nssv1803889,nssv1803871,nssv1803921,nssv1803927,nssv1803896,nssv1803879,nssv1803867,nssv1803905,nssv1803880,nssv1803904,nssv1803870,nssv1803897,nssv1803925,nssv1803924,nssv1803908,nssv1803900,nssv1803909,nssv1803928,nssv1803881,nssv1803898,nssv2605089,nssv1803894 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548060 1 159696437 159709484 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727682,nssv727681,nssv727680,nssv727679,nssv727678 M 17421 0 5 "" dgv8e55 1 159730122 159940306 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750812,esv2750813,esv2750814 M 771 7 0 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7,RPL31P11 BEC_408,BEC_425,BEC_531 nsv482137 1 159741829 159755983 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558498 M 1 1 0 FCGR2A KB1 dgv447n100 1 159743113 159936953 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002020,nsv1007723,nsv1014053,nsv1004462,nsv1013109,nsv1001205,nsv1005425,nsv1013498,nsv1005821,nsv1011951,nsv1014024,nsv1005277,nsv1000379,nsv998428,nsv1002157,nsv1005455 M 29084 28 0 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7,RPL31P11 nsv8502 1 159743972 159913174 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23689,nssv26375,nssv24878,nssv22096,nssv26573,nssv20095,nssv20409,nssv26873,nssv26733,nssv25958,nssv21757,nssv26379,nssv19430,nssv22101,nssv25954,nssv19108,nssv22769 M 31 0 16 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 NA07029,NA10839,NA11830,NA12155,NA12740,NA18504,NA18517,NA18552,NA18564,NA18853,NA18860,NA18980,NA19144,NA19173,NA19221,NA19240 dgv5e203 1 159745160 159905154 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array esv2763869,esv2764263 M 1109 16 5 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 RW_0001,RW_0020,RW_0030,RW_0093,RW_0116,RW_0171,RW_0181,RW_0211,RW_0610,SW_0005,SW_0007,SW_0091,SW_0170,SW_0239,SW_0889,SW_1128,SW_1153,SW_1180,SW_1464,SW_1475,SW_1539 esv33393 1 159745305 160346951 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv96426,essv98446,essv99411,essv100269,essv101296,essv97924,essv94830,essv99230,essv98979,essv92656,essv93182,essv92935,essv93879,essv97486,essv95539,essv96235,essv101107,essv99626,essv98751,essv98620,essv95371,essv95959,essv101513,essv96700,essv95901,essv99774,essv100802,essv94360,essv93746,essv95013,essv98210,essv97190,essv97445,essv96932,essv93541 M 51 1 34 ATF6,DUSP12,FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,FCRLA,FCRLB,HSPA6,HSPA7,NOS1AP,OLFML2B,RPL31P11 21603,21606,21616,21618,21634,21656,21772,21791,21805,21808,21817,21837,21847,21872,21879,21911,21938,21939,21972,22007,22011,22075,22085,22086,22127,22128,22170,22217,22231,22233,22261,22275,22286,22335,22352 nsv946463 1 159746330 159749479 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803947,nssv1803958,nssv1803955,nssv1803991,nssv1803937,nssv1804501,nssv1803946,nssv1803984,nssv1803932,nssv1803998,nssv1804013,nssv1803995,nssv1803948,nssv1803967,nssv1803942,nssv1804025,nssv1804015,nssv1803961,nssv1803953,nssv1803974,nssv1804012,nssv1804024,nssv1804008,nssv1803992,nssv1803950,nssv1803987,nssv1803962,nssv1803963,nssv1803951,nssv1804020,nssv1803941,nssv1803999,nssv1803943,nssv1804023,nssv1803956,nssv1803970,nssv1803936,nssv1803931,nssv1803949,nssv1803983,nssv1803959,nssv1803975,nssv1803939,nssv1804004,nssv1803945,nssv1803989,nssv1803934,nssv1803981,nssv1804014,nssv1803954,nssv1803935,nssv1803988,nssv1804011,nssv1804022,nssv1803944,nssv1804019,nssv1803960,nssv1803982,nssv1804010,nssv1803979,nssv1803952,nssv1803996,nssv1803940,nssv1803985,nssv1803938,nssv1803969,nssv1804016,nssv1803973,nssv1804017,nssv1803972,nssv1803933,nssv1804007,nssv1804009,nssv1803980,nssv1803965,nssv1803976,nssv1804003,nssv1803986,nssv1803971,nssv1803990,nssv1803966,nssv1804018,nssv1803977,nssv1804001,nssv1804502,nssv1803997,nssv1803993,nssv1804021,nssv1804000,nssv1803957,nssv1803968,nssv1804002,nssv1804006,nssv1804005,nssv1803978,nssv1803994,nssv1803964 M 97 10 0 FCGR2A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv17n21 1 159746369 159766754 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv526950,nsv523906 M 2026 0 2 FCGR2A,HSPA6 nsv519779 1 159746369 159905010 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697045 M 2026 0 1 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 nsv464173 1 159746369 159913431 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540130 M 1557 1 0 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 1780854525_A nsv825176 1 159746469 159913502 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434296,nssv1433451,nssv1428850,nssv1423158,nssv1421483,nssv1432407 M 31 6 0 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 AK12,NA18526,NA18592,NA18972,NA18997,NA18999 nsv820341 1 159746469 159914772 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420724 M 1 1 0 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 NA10851 esv997087 1 159749579 159913028 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586300 M 3 0 1 FCGR2A,FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 HuRef dgv22n16 1 159749902 159845486 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436381,nsv436100 M 2 0 1 FCGR2A,FCGR2C,FCGR3A,HSPA6,HSPA7 NA18505 nsv946464 1 159750202 159791429 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804516,nssv1804570,nssv1804510,nssv1804503,nssv1804578,nssv1804555,nssv1804513,nssv1804565,nssv1804519,nssv1804569,nssv1804512,nssv1804547,nssv1804581,nssv1804550,nssv1804574,nssv1804549,nssv1804520,nssv1804554,nssv1804527,nssv1804542,nssv1804580,nssv1804536,nssv1804532,nssv1804557,nssv1804575,nssv1804551,nssv1804505,nssv1804552,nssv1804504,nssv1804568,nssv1804528,nssv1804529,nssv1804577,nssv1804545,nssv1804522,nssv1804548,nssv1804573,nssv1804541,nssv1804506,nssv1804538,nssv1804518,nssv1804566,nssv1804515,nssv1804572,nssv1804521,nssv1804558,nssv1804508,nssv1804539,nssv1804517,nssv1804561,nssv1804511,nssv1804544,nssv1804514,nssv1804543,nssv1804509,nssv1804567,nssv1804531,nssv1804563,nssv1804579,nssv1804546,nssv1804507,nssv1804530,nssv1804525,nssv1804556,nssv1804534,nssv1804533,nssv1804576,nssv1804564,nssv1804524,nssv1804526,nssv1804523,nssv1804540,nssv1804582,nssv1804537,nssv1804571,nssv1804559,nssv1804535,nssv1804553,nssv1804562,nssv1804560 M 97 10 0 FCGR2A,FCGR3A,HSPA6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv85n67 1 159755997 159914772 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825220,nsv825209,nsv825198,nsv825187,nsv825231 M 31 0 5 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 AK14,AK20,AK4,NA18564,NA18949 esv3890693 1 159757520 159891378 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25801433,essv25779317 M 3017 0 2 FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 nsv819523 1 159758182 159899278 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418784 M 2 0 1 FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 AK1 nsv818489 1 159761664 159913448 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417711 M 112 1 0 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7 NA18999 nsv517640 1 159761664 159929108 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv698834,nssv677518,nssv677351,nssv666844,nssv693456,nssv652754,nssv686629,nssv677746,nssv686593,nssv693890,nssv679036,nssv654186,nssv672481,nssv678767,nssv671510 M 2026 7 8 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA6,HSPA7,RPL31P11 nsv548061 1 159762390 159808888 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727683 M 17421 0 1 FCGR3A,HSPA6 dgv448n100 1 159763524 159905125 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001586,nsv1002256,nsv1007882,nsv1002044,nsv1012357,nsv1004441,nsv1013229,nsv1005156,nsv1003048,nsv997670,nsv1008031,nsv997443,nsv997850,nsv1013066,nsv1001036,nsv997618,nsv1013029,nsv1008868,nsv1000695 M 29084 0 22 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7 dgv449n100 1 159763524 159918914 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007578,nsv1008806,nsv997331,nsv1000353,nsv1007080,nsv1000058,nsv1010555,nsv999946,nsv1009316,nsv1011944,nsv1005955,nsv1001335,nsv998753,nsv1009245,nsv1011914 M 29084 164 37 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7 nsv159576 1 159767935 159769570 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178154 M 24 "" dgv450n100 1 159768469 159904813 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009815,nsv999723,nsv1001211,nsv1001018,nsv1011277,nsv1003125,nsv1008903,nsv1005604,nsv1004423 M 29084 12 0 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7 dgv451n100 1 159768469 159915233 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014122,nsv1006417 M 29084 0 2 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7 dgv605n54 1 159769773 159907601 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548063,nsv548062 M 17421 0 2 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7 nsv514915 1 159776112 159913200 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2853815,nssv2852397,nssv2853808,nssv2853775,nssv2853790,nssv2853776,nssv2853799,nssv2853777,nssv2853789,nssv2853778,nssv2853794,nssv2852300,nssv2853812,nssv2852482,nssv2853786,nssv2852486,nssv2853806,nssv2853779,nssv2853803,nssv2852379,nssv2853813,nssv2852442,nssv2853797,nssv2852358,nssv2853809,nssv2852419,nssv2853796,nssv2852514,nssv2853810,nssv2852253,nssv2853783,nssv2852291,nssv2853804,nssv2853698,nssv2853787,nssv2853703,nssv2853822,nssv2853756,nssv2853795,nssv2853669,nssv2853800,nssv2852511,nssv2853827,nssv2852360,nssv2853784,nssv2852536,nssv2853807,nssv2852408,nssv2853805,nssv2852422,nssv2853826,nssv2852359,nssv2853821,nssv2853675,nssv2853798,nssv2852266,nssv2853781,nssv2852328,nssv2853791,nssv2852377,nssv2853785,nssv2852549,nssv2853814,nssv2853720,nssv2853823,nssv2853721,nssv2853802,nssv2852251,nssv2853817,nssv2852518,nssv2853788,nssv2852469,nssv2853816,nssv2853691,nssv2853825,nssv2852315,nssv2853793,nssv2852389,nssv2853828,nssv2852332,nssv2853801,nssv2852272,nssv2853818,nssv2852412,nssv2853819,nssv2852407,nssv2853820,nssv2852495,nssv2853811,nssv2852327,nssv2853782,nssv2852493,nssv2853824,nssv2853755,nssv2853792,nssv2853725,nssv2852540,nssv2853688,nssv2853739,nssv2853726,nssv2852285,nssv2852298,nssv2852459,nssv2853700,nssv2852516,nssv2852250,nssv2853684,nssv2853741,nssv2852410,nssv2852257,nssv2852409,nssv2852404,nssv2852521,nssv2852447,nssv2852356,nssv2853728,nssv2852305,nssv2852392,nssv2852553,nssv2852541,nssv2852450,nssv2852461,nssv2852471,nssv2852393,nssv2853697,nssv2852237,nssv2853746,nssv2852318,nssv2852320,nssv2852468,nssv2852466,nssv2852252,nssv2852354,nssv2853759,nssv2852400,nssv2852283,nssv2853766,nssv2853685,nssv2852525,nssv2852378,nssv2852402,nssv2852425,nssv2852470,nssv2852390,nssv2853717,nssv2853715,nssv2852528,nssv2852364,nssv2853667,nssv2852480,nssv2853665,nssv2853694,nssv2852275,nssv2852545,nssv2852355,nssv2852544,nssv2852247,nssv2853745,nssv2853670,nssv2853730,nssv2853740,nssv2852522,nssv2852429,nssv2852420,nssv2852457,nssv2852258,nssv2853750,nssv2852428,nssv2852371,nssv2853672,nssv2852417,nssv2852529,nssv2852519,nssv2852267,nssv2853743,nssv2852476,nssv2852375,nssv2852240,nssv2852324,nssv2852260,nssv2852326,nssv2852234,nssv2852462,nssv2853761,nssv2852281,nssv2852509,nssv2852501,nssv2852467,nssv2852532,nssv2852243,nssv2852268,nssv2852485,nssv2852287,nssv2852489,nssv2853689,nssv2852238,nssv2852376,nssv2852449,nssv2852293,nssv2852236,nssv2853692,nssv2852369,nssv2852337,nssv2852242,nssv2852261,nssv2852547,nssv2853731,nssv2853679,nssv2852405,nssv2853724,nssv2852506,nssv2852499,nssv2852433,nssv2852503,nssv2853752,nssv2852310,nssv2852321,nssv2852463,nssv2852347,nssv2852446,nssv2852309,nssv2852299,nssv2853753,nssv2852497,nssv2852517,nssv2852334,nssv2852363,nssv2852307,nssv2852302,nssv2852313,nssv2852538,nssv2852386,nssv2852303,nssv2853744,nssv2853737,nssv2852534,nssv2852415,nssv2853748,nssv2853668,nssv2853663,nssv2852357,nssv2853690,nssv2852512,nssv2852423,nssv2852479,nssv2852368,nssv2852453,nssv2852274,nssv2852330,nssv2853767,nssv2853693,nssv2853768,nssv2852481,nssv2852492,nssv2852289,nssv2852239,nssv2852278,nssv2853734,nssv2853780,nssv2852445,nssv2852262,nssv2852444,nssv2853712,nssv2852395,nssv2852510,nssv2853666,nssv2852277,nssv2852426,nssv2852245,nssv2853673,nssv2852259,nssv2852477,nssv2852333,nssv2852533,nssv2852284,nssv2852322,nssv2853714,nssv2852348,nssv2852531,nssv2852319,nssv2853678,nssv2852418,nssv2852421,nssv2852256,nssv2852439,nssv2852474,nssv2852366,nssv2853707,nssv2852372,nssv2853742,nssv2852427,nssv2852484,nssv2852312,nssv2853696,nssv2853711,nssv2852440,nssv2852537,nssv2853738,nssv2853774,nssv2852548,nssv2852483,nssv2852346,nssv2852542,nssv2852246,nssv2852413,nssv2852352,nssv2852344,nssv2853680,nssv2852394,nssv2852308,nssv2852382,nssv2853763,nssv2852475,nssv2853735,nssv2853699,nssv2853702,nssv2852502,nssv2852437,nssv2853704,nssv2852491,nssv2852505,nssv2853747,nssv2852535,nssv2853706,nssv2852249,nssv2853710,nssv2853758,nssv2853713,nssv2852273,nssv2852456,nssv2852304,nssv2852515,nssv2852454,nssv2853708,nssv2853765,nssv2853674,nssv2852265,nssv2852416,nssv2852414,nssv2852235,nssv2852353,nssv2853718,nssv2852530,nssv2852524,nssv2853722,nssv2852294,nssv2852443,nssv2852373,nssv2852351,nssv2852385,nssv2852340,nssv2852432,nssv2852498,nssv2853695,nssv2853736,nssv2852455,nssv2853677,nssv2853732,nssv2852523,nssv2852436,nssv2853682,nssv2852551,nssv2852282,nssv2852496,nssv2852301,nssv2853661,nssv2852448,nssv2852388,nssv2852296,nssv2852264,nssv2852279,nssv2852550,nssv2852306,nssv2853687,nssv2852490,nssv2853751,nssv2852406,nssv2852441,nssv2852297,nssv2852244,nssv2852513,nssv2852316,nssv2853671,nssv2852383,nssv2852339,nssv2852254,nssv2852460,nssv2852295,nssv2852424,nssv2853729,nssv2852370,nssv2852365,nssv2852398,nssv2852472,nssv2852520,nssv2852350,nssv2853760,nssv2852271,nssv2852314,nssv2853664,nssv2852374,nssv2852507,nssv2852411,nssv2853754,nssv2852269,nssv2852539,nssv2852276,nssv2852452,nssv2852248,nssv2853683,nssv2852311,nssv2852396,nssv2852478,nssv2852384,nssv2852263,nssv2852504,nssv2852270,nssv2852403,nssv2852430,nssv2852552,nssv2852336,nssv2853769,nssv2853772,nssv2853701,nssv2852286,nssv2852546,nssv2852335,nssv2853719,nssv2853770,nssv2852473,nssv2852487,nssv2852349,nssv2853762,nssv2852508,nssv2852488,nssv2853757,nssv2852380,nssv2852526,nssv2852465,nssv2852391,nssv2852280,nssv2852317,nssv2852341,nssv2852255,nssv2852494,nssv2852362,nssv2853727,nssv2852431,nssv2853723,nssv2853676,nssv2853716,nssv2852401,nssv2853749,nssv2852451,nssv2852387,nssv2853705,nssv2852438,nssv2852367,nssv2852381,nssv2852361,nssv2853681,nssv2852338,nssv2852329,nssv2852323,nssv2853771,nssv2852342,nssv2853686,nssv2853764,nssv2852345,nssv2852543,nssv2853733,nssv2853662,nssv2852292,nssv2852288,nssv2852464,nssv2852458,nssv2852290,nssv2852500,nssv2852434,nssv2852343,nssv2852325,nssv2852399,nssv2852435,nssv2852241,nssv2853709,nssv2853773,nssv2852527,nssv2852331 M 2366 488 0 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv818500 1 159777717 159884140 CNV gain Wang_et_al_2007 17921354 SNP array nssv1415735 M 112 1 0 FCGR2C,FCGR3A,FCGR3B,HSPA7 NA12875 esv3584532 1 159778034 159906183 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838861 M 34 1 0 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7 OA013 nsv442209 1 159778034 159906183 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1618731,nssv1618791,nssv1618888,nssv1618825,nssv1618929,nssv1618732,nssv1618786,nssv1618788,nssv1618923,nssv1618801,nssv1618837,nssv1618863,nssv1618872,nssv1618813,nssv1618882,nssv1618945,nssv1618764,nssv1618932,nssv1618781,nssv1618790,nssv1618934,nssv1618902,nssv1618948,nssv1618727,nssv1618950,nssv1618800,nssv1618715,nssv1618755,nssv1618862,nssv1618819,nssv1618920,nssv1618752,nssv1618842,nssv1618880,nssv1618709,nssv1618887,nssv1618780,nssv1618877,nssv1618719,nssv1618782,nssv1618810,nssv1618711,nssv1618787,nssv1618826,nssv1618739,nssv1618919,nssv1618794,nssv1618946,nssv1618754,nssv1618756,nssv1618856,nssv1618823,nssv1618736,nssv1618839,nssv1618956,nssv1618894,nssv1618766,nssv1618734,nssv1618770,nssv1618803,nssv1618775,nssv1618859,nssv1618926,nssv1618846,nssv1618912,nssv1618885,nssv1618944,nssv1618892,nssv1618789,nssv1618868,nssv1618804,nssv1618875,nssv1618807,nssv1618720,nssv1618959,nssv1618958,nssv1618860,nssv1618797,nssv1618931,nssv1618758,nssv1618808,nssv1618853,nssv1618795,nssv1618905,nssv1618740,nssv1618716,nssv1618915,nssv1618916,nssv1618741,nssv1618750,nssv1618851,nssv1618792,nssv1618955,nssv1618765,nssv1618818,nssv1618864,nssv1618898,nssv1618828,nssv1618857,nssv1618806,nssv1618822,nssv1618774,nssv1618729,nssv1618939,nssv1618802,nssv1618954,nssv1618943,nssv1618918,nssv1618749,nssv1618805,nssv1618865,nssv1618925,nssv1618706,nssv1618768,nssv1618883,nssv1618769,nssv1618913,nssv1618849,nssv1618705,nssv1618762,nssv1618952,nssv1618850,nssv1618903,nssv1618773,nssv1618873,nssv1618869,nssv1618960,nssv1618830,nssv1618922,nssv1618949,nssv1618938,nssv1618812,nssv1618763,nssv1618911,nssv1618896,nssv1618833,nssv1618910,nssv1618854,nssv1618866,nssv1618703,nssv1618793,nssv1618957,nssv1618777,nssv1618761,nssv1618735,nssv1618827,nssv1618935,nssv1618772,nssv1618841,nssv1618889,nssv1618799,nssv1618710,nssv1618858,nssv1618784,nssv1618811,nssv1618738,nssv1618917,nssv1618714,nssv1618848,nssv1618936,nssv1618778,nssv1618712,nssv1618832,nssv1618702,nssv1618921,nssv1618861,nssv1618767,nssv1618821,nssv1618747,nssv1618798,nssv1618718,nssv1618796,nssv1618753,nssv1618876,nssv1618817,nssv1618707,nssv1618940,nssv1618744,nssv1618928,nssv1618704,nssv1618895,nssv1618871,nssv1618724,nssv1618951,nssv1618897,nssv1618771,nssv1618870,nssv1618930,nssv1618843,nssv1618907,nssv1618933,nssv1618836,nssv1618834,nssv1618900,nssv1618901,nssv1618730,nssv1618867,nssv1618891,nssv1618726,nssv1618941,nssv1618847,nssv1618713,nssv1618906,nssv1618886,nssv1618824,nssv1618820,nssv1618937,nssv1618717,nssv1618737,nssv1618878,nssv1618845,nssv1618904,nssv1618844,nssv1618879,nssv1618838,nssv1618814,nssv1618816,nssv1618722,nssv1618881,nssv1618728,nssv1618893,nssv1618809,nssv1618855,nssv1618874,nssv1618733,nssv1618743,nssv1618776,nssv1618757,nssv1618927,nssv1618759,nssv1618899,nssv1618909,nssv1618908,nssv1618924,nssv1618914,nssv1618815,nssv1618721,nssv1618829,nssv1618785,nssv1618725,nssv1618779,nssv1618953,nssv1618852,nssv1618748,nssv1618840,nssv1618723,nssv1618708,nssv1618745,nssv1618701,nssv1618742,nssv1618783,nssv1618751,nssv1618942,nssv1618884,nssv1618835,nssv1618947,nssv1618746,nssv1618890,nssv1618831,nssv1618760 M 270 260 0 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7 NA06985,NA06991,NA06993,NA06994,NA07000,NA07019,NA07022,NA07029,NA07034,NA07048,NA07055,NA07056,NA07345,NA07348,NA07357,NA10830,NA10831,NA10835,NA10838,NA10839,NA10846,NA10847,NA10851,NA10854,NA10855,NA10856,NA10857,NA10859,NA10860,NA10861,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12005,NA12006,NA12043,NA12044,NA12056,NA12057,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12707,NA12716,NA12717,NA12740,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12762,NA12763,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12864,NA12865,NA12872,NA12873,NA12874,NA12878,NA12891,NA12892,NA18500,NA18501,NA18502,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18516,NA18521,NA18522,NA18523,NA18524,NA18526,NA18532,NA18537,NA18540,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18562,NA18563,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18623,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18870,NA18871,NA18872,NA18912,NA18913,NA18914,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19116,NA19119,NA19120,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19192,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19211,NA19221,NA19222,NA19223,NA19238,NA19239,NA19240 dgv1n39 1 159778175 159787037 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nsv482139,nsv482138 M 1 1 0 FCGR3A KB1 nsv509546 1 159779456 159921056 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619818,nssv617996,nssv623804,nssv621106 M 4 4 0 FCGR2B,FCGR2C,FCGR3A,FCGR3B,HSPA7,RPL31P11 CHM,NA10860,NA15510,NA18994 dgv23n16 1 159779947 159867719 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436035,nsv436036,nsv436808 M 2 2 0 FCGR2C,FCGR3A,FCGR3B,HSPA7 NA15510,NA18505 nsv159772 1 159781994 159782069 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178350 M 24 FCGR3A esv2507888 1 159784837 159867596 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5206656 M 1 0 1 FCGR2C,FCGR3A,FCGR3B,HSPA7 NA18507 esv990743 1 159786464 159886090 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587049 M 3 0 1 FCGR2C,FCGR3A,FCGR3B,HSPA7 HuRef nsv821621 1 159789853 159903466 CNV loss Sebat_et_al_2004 15273396 ROMA nssv1421213,nssv1421202 M 31 0 2 FCGR2B,FCGR2C,FCGR3B,HSPA7 nsv946465 1 159791429 159795138 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804612,nssv1804639,nssv1804599,nssv1804659,nssv1804596,nssv1804649,nssv1804607,nssv1804583,nssv1804600,nssv1804606,nssv1804665,nssv1804671,nssv1804614,nssv1804653,nssv1804586,nssv1804677,nssv1804585,nssv1804636,nssv1804584,nssv1804638,nssv1804593,nssv1804670,nssv1804661,nssv1804635,nssv1804664,nssv1804615,nssv1804602,nssv1804633,nssv1804660,nssv1804678,nssv1804595,nssv1804619,nssv1804662,nssv1804650,nssv1804597,nssv1804658,nssv1804608,nssv1804673,nssv1804598,nssv1804640,nssv1804605,nssv1804626,nssv1804601,nssv1804616,nssv1804667,nssv1804657,nssv1804588,nssv1804634,nssv1804591,nssv1804674,nssv1804611,nssv1804654,nssv1804669,nssv1804627,nssv1804587,nssv1804637,nssv1804668,nssv1804609,nssv1804589,nssv1804618,nssv1804663,nssv1804622,nssv1804592,nssv1804647,nssv1804603,nssv1804628,nssv1804666,nssv1804625,nssv1804604,nssv1804645,nssv1804590,nssv1804646,nssv1804594,nssv1804631,nssv1804632,nssv1804621,nssv1804648,nssv1804623,nssv1804629,nssv1804655,nssv1804676,nssv1804610,nssv1804652,nssv1804624,nssv1804630,nssv1804672,nssv1804656,nssv1804643,nssv1804679,nssv1804651,nssv1804644,nssv1804642,nssv1804641,nssv1804613,nssv1804675,nssv1804620,nssv1804617 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946466 1 159796045 159823241 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804691,nssv1804739,nssv1804696,nssv1804741,nssv1804697,nssv1804730,nssv1804756,nssv1804719,nssv1804693,nssv1804745,nssv1804704,nssv1804717,nssv1804711,nssv1804748,nssv1804700,nssv1804714,nssv1804689,nssv1804746,nssv1804750,nssv1804733,nssv1804757,nssv1804727,nssv1804685,nssv1804712,nssv1804754,nssv1804703,nssv1804699,nssv1804735,nssv1804705,nssv1804706,nssv1804683,nssv1804734,nssv1804688,nssv1804716,nssv1804698,nssv1804736,nssv1804695,nssv1804713,nssv1804692,nssv1804732,nssv1804709,nssv1804747,nssv1804686,nssv1804731,nssv1804708,nssv1804707,nssv1804690,nssv1804737,nssv1804681,nssv1804680,nssv1804751,nssv1804724,nssv1804687,nssv1804728,nssv1804702,nssv1804743,nssv1804684,nssv1804725,nssv1804752,nssv1804722,nssv1804758,nssv1804718,nssv1804694,nssv1804749,nssv1804753,nssv1804723,nssv1804701,nssv1804729,nssv1804755,nssv1804720,nssv1804682,nssv1804726,nssv1804759,nssv1804744,nssv1804715,nssv1804710,nssv1804738,nssv1804740,nssv1804742,nssv1804721 M 97 10 0 FCGR2C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548064 1 159807276 159810816 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727687,nssv727686 M 17421 0 2 "" dgv24n16 1 159808110 159908158 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436811,nsv436806 M 2 1 0 FCGR2B,FCGR2C,FCGR3B,HSPA7 NA18505 dgv606n54 1 159808888 159907601 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548068,nsv548065 M 17421 0 2 FCGR2B,FCGR2C,FCGR3B,HSPA7 nsv548066 1 159824353 159884140 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727689 M 17421 1 0 FCGR2C,FCGR3B,HSPA7 dgv607n54 1 159824353 159898322 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548069,nsv548067,nsv548070,nsv548073,nsv548071 M 17421 0 8 FCGR2C,FCGR3B,HSPA7 nsv825242 1 159825720 159886090 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437885 M 31 0 1 FCGR2C,FCGR3B,HSPA7 NA18547 nsv946467 1 159827657 159831306 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804767,nssv1805556,nssv1805587,nssv1805561,nssv1804770,nssv1805573,nssv1804776,nssv1805594,nssv1804779,nssv1805558,nssv1805588,nssv1805545,nssv1804791,nssv1804794,nssv1804777,nssv1805578,nssv1804773,nssv1804760,nssv1804784,nssv1805555,nssv1804780,nssv1805542,nssv1805589,nssv1805601,nssv1804761,nssv1804783,nssv1805583,nssv1804792,nssv1804788,nssv1805549,nssv1805590,nssv1805564,nssv1805586,nssv1805574,nssv1804763,nssv1805575,nssv1805585,nssv1804793,nssv1805582,nssv1805577,nssv1804771,nssv1804796,nssv1804778,nssv1805563,nssv1804782,nssv1805559,nssv1804768,nssv1805598,nssv1804772,nssv1805551,nssv1804765,nssv1805599,nssv1804789,nssv1805562,nssv1804775,nssv1805567,nssv1804764,nssv1805552,nssv1804774,nssv1805544,nssv1804785,nssv1805597,nssv1804781,nssv1805593,nssv1804766,nssv1804786,nssv1805584,nssv1804790,nssv1804762,nssv1805557,nssv1804769,nssv1805571,nssv1805591,nssv1805592,nssv1805568,nssv1805576,nssv1805566,nssv1805581,nssv1805560,nssv1805569,nssv1805554,nssv1805553,nssv1805565,nssv1805600,nssv1805550,nssv1805570,nssv1805596,nssv1805595,nssv1805543,nssv1805580,nssv1805579,nssv1804795,nssv1804787,nssv1805548,nssv1805547,nssv1805546,nssv1805572 M 97 10 0 FCGR2C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv5752 1 159831229 159913394 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28193 M 1 0 0 FCGR2B,FCGR2C,FCGR3B,HSPA7 esv3325 1 159831257 159913343 CNV loss Wang_et_al_2008 18987735 Sequencing essv25766 M 1 0 1 FCGR2B,FCGR2C,FCGR3B,HSPA7 YH nsv946468 1 159831306 159906567 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805609,nssv1805645,nssv1805623,nssv1805644,nssv1805678,nssv1805643,nssv1805618,nssv1805649,nssv1805619,nssv1805658,nssv1805615,nssv1805667,nssv1805608,nssv1805655,nssv1805626,nssv1805642,nssv1805611,nssv1805636,nssv1805613,nssv1805652,nssv1805606,nssv1805628,nssv1805677,nssv1805639,nssv1805604,nssv1805671,nssv1805605,nssv1805670,nssv1805621,nssv1805629,nssv1805673,nssv1805646,nssv1805680,nssv1805638,nssv1805610,nssv1805660,nssv1805676,nssv1805653,nssv1805679,nssv1805664,nssv1805672,nssv1805656,nssv1805603,nssv1805661,nssv1805627,nssv1805663,nssv1805620,nssv1805632,nssv1805614,nssv1805602,nssv1805624,nssv1805665,nssv1805612,nssv1805654,nssv1805617,nssv1805657,nssv1805616,nssv1805668,nssv1805675,nssv1805648,nssv1805681,nssv1805641,nssv1805630,nssv1805651,nssv1805607,nssv1805662,nssv1805622,nssv1805640,nssv1805633,nssv1805659,nssv1805674,nssv1805634,nssv1805631,nssv1805637,nssv1805666,nssv1805650,nssv1805647,nssv1805625,nssv1805635,nssv1805669 M 97 10 0 FCGR2B,FCGR2C,FCGR3B,HSPA7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548072 1 159842071 159860092 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727698 M 17421 0 1 FCGR3B,HSPA7 nsv825254 1 159843982 159886090 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1427290 M 31 1 0 FCGR3B,HSPA7 AK8 nsv1009190 1 159859475 159885670 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501254,nssv3491802,nssv3497912,nssv3483318 M 29084 1 3 FCGR3B nsv1014547 1 159859475 159888781 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500290,nssv3498721,nssv3491324 M 29084 0 3 FCGR3B nsv1014271 1 159859475 159904480 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497519 M 29084 0 1 FCGR2B,FCGR3B dgv452n100 1 159859475 159905125 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003664,nsv997746,nsv1015116,nsv997933,nsv1004295 M 29084 33 15 FCGR2B,FCGR3B dgv453n100 1 159859475 159918914 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013749,nsv1007678,nsv1005372 M 29084 6 0 FCGR2B,FCGR3B nsv548074 1 159859713 159907601 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727700 M 17421 0 1 FCGR2B,FCGR3B dgv454n100 1 159878858 159905125 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009463,nsv1010402 M 29084 6 7 FCGR2B dgv455n100 1 159878858 159905125 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002767,nsv1004697,nsv1002184,nsv1009084,nsv1006134,nsv1000370,nsv1006004,nsv999511 M 29084 0 9 FCGR2B nsv997927 1 159878858 159935058 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498480 M 29084 1 0 FCGR2B,RPL31P11 nsv1004391 1 159883575 159896554 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489032,nssv3704802 M 29084 1 1 "" nsv1003686 1 159884014 159914849 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704804 M 29084 0 1 FCGR2B nsv1003502 1 159884043 159905125 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486275 M 29084 1 0 FCGR2B nsv825265 1 159885269 159886090 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423987 M 31 0 1 "" NA18582 nsv437224 1 159887482 159905154 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467105 M 60 0 1 FCGR2B NA12752 nsv482140 1 159899566 159910487 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558501 M 1 1 0 FCGR2B KB1 nsv946470 1 159906567 159913455 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805749,nssv1802281,nssv1805723,nssv1805686,nssv1805756,nssv1805689,nssv1805750,nssv1805691,nssv1802292,nssv1805698,nssv1802294,nssv1805699,nssv1805725,nssv1805703,nssv1802287,nssv1805713,nssv1805738,nssv1805684,nssv1805727,nssv1805695,nssv1805705,nssv1805706,nssv1805716,nssv1805688,nssv1805724,nssv1805693,nssv1802290,nssv1805701,nssv1805735,nssv1805707,nssv1802293,nssv1805760,nssv1805747,nssv1805711,nssv1802291,nssv1805759,nssv1802289,nssv1802280,nssv1805732,nssv1805700,nssv1805729,nssv1805685,nssv1805722,nssv1805694,nssv1805755,nssv1802278,nssv1805751,nssv1805690,nssv1805708,nssv1802282,nssv1805719,nssv1805696,nssv1805733,nssv1805692,nssv1805754,nssv1802284,nssv1805718,nssv1805697,nssv1805728,nssv1802277,nssv1805712,nssv1805683,nssv1805726,nssv1805702,nssv1805744,nssv1805687,nssv1805740,nssv1802279,nssv1805741,nssv1802283,nssv1805720,nssv1805704,nssv1805736,nssv1805710,nssv1805737,nssv1805709,nssv1805743,nssv1805748,nssv1805758,nssv1802285,nssv1805752,nssv1802286,nssv1805714,nssv1805745,nssv1805742,nssv1805721,nssv1805731,nssv1805715,nssv1805739,nssv1805717,nssv1805682,nssv1805734,nssv1805753,nssv1805730,nssv1802288,nssv1805746,nssv1805757 M 97 10 0 FCGR2B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv464184 1 159913431 160151976 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540137 M 1557 1 0 ATF6,DUSP12,FCGR2B,FCRLA,FCRLB,RPL31P11 HGDP00864 nsv548075 1 159913431 160151976 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173215 M 17421 1 0 ATF6,DUSP12,FCGR2B,FCRLA,FCRLB,RPL31P11 HGDP00864 nsv946471 1 159919449 159927197 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802379,nssv1802333,nssv1802378,nssv1802334,nssv1802304,nssv1802325,nssv1802312,nssv1802341,nssv1802305,nssv1802345,nssv1802377,nssv1802332,nssv1802380,nssv1802390,nssv1802298,nssv1802338,nssv1802302,nssv1802340,nssv1802309,nssv1802388,nssv1802307,nssv1802355,nssv1802297,nssv1802384,nssv1802320,nssv1802339,nssv1802323,nssv1802354,nssv1802376,nssv1802328,nssv1802300,nssv1802389,nssv1802310,nssv1802363,nssv1802314,nssv1802387,nssv1802315,nssv1802391,nssv1802306,nssv1802351,nssv1802372,nssv1802335,nssv1802301,nssv1802347,nssv1802303,nssv1802356,nssv1802317,nssv1802352,nssv1802313,nssv1802386,nssv1802296,nssv1802367,nssv1802299,nssv1802321,nssv1802375,nssv1802364,nssv1802316,nssv1802358,nssv1802381,nssv1802368,nssv1802308,nssv1802331,nssv1802324,nssv1802337,nssv1802326,nssv1802295,nssv1802374,nssv1802322,nssv1802373,nssv1802349,nssv1802311,nssv1802336,nssv1802319,nssv1802342,nssv1802353,nssv1802370,nssv1802383,nssv1802346,nssv1802350,nssv1802329,nssv1802361,nssv1802343,nssv1802330,nssv1802366,nssv1802344,nssv1802365,nssv1802357,nssv1802382,nssv1802360,nssv1802371,nssv1802348,nssv1802385,nssv1802327,nssv1802318,nssv1802369,nssv1802359,nssv1802362 M 97 10 0 RPL31P11 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv524449 1 159947492 159948404 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700382 M 2026 0 1 FCRLA nsv516773 1 159958057 159969387 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv670750,nssv679635 M 2026 2 0 FCRLB nsv464195 1 159959627 159969416 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540144 M 1557 0 1 FCRLB 1780854158_A nsv548076 1 159959627 159969416 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173216 M 17421 0 1 FCRLB 1780854158_A nsv527196 1 159969642 159969822 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703594 M 2026 0 1 "" esv1005615 1 159973936 159981068 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563591 M 3 0 1 "" HuRef esv3445971 1 159990230 159990230 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823141 M 185 1 0 DUSP12 NA12878 nsv464206 1 160064863 160334071 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540152 M 1557 1 0 ATF6,NOS1AP,OLFML2B HGDP00458 nsv470744 1 160064863 160334071 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547784 M 443 1 0 ATF6,NOS1AP,OLFML2B HGDP00458 nsv548077 1 160064863 160334071 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173217 M 17421 1 0 ATF6,NOS1AP,OLFML2B HGDP00458 nsv3276 1 160072069 160093895 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4786 M 9 1 0 ATF6 NA19129 esv3336606 1 160085052 160086750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692004 M 185 1 0 ATF6 NA19239 nsv1014340 1 160089415 160119008 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497589 M 29084 0 1 ATF6 esv3304870 1 160105168 160105169 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7764476 M 185 1 0 ATF6 NA11840 esv3450329 1 160105171 160105190 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596479 M 185 1 0 ATF6 NA11840 nsv1007108 1 160192438 160269541 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492350 M 29084 1 0 ATF6,OLFML2B nsv831747 1 160192991 160369935 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450984,nssv1451039,nssv1450950,nssv1451006,nssv1450995,nssv1450973,nssv1450962,nssv1451028,nssv1451017 M 95 0 9 ATF6,NOS1AP,OLFML2B nsv160321 1 160201543 160201949 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178899 M 24 "" nsv548078 1 160207843 160247126 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727701 M 17421 1 0 OLFML2B nsv3287 1 160230415 160263777 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1645 M 9 1 0 OLFML2B NA19240 esv2055258 1 160319105 160319825 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4701003 M 1 0 1 NOS1AP NA18507 esv6376 1 160319131 160319868 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28817 M 1 0 0 NOS1AP esv2951 1 160319247 160319798 CNV loss Wang_et_al_2008 18987735 Sequencing essv25392 M 1 0 1 NOS1AP YH nsv158962 1 160319290 160319609 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177540 M 24 NOS1AP esv988854 1 160319294 160319613 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573457 M 3 0 1 NOS1AP HuRef esv1282003 1 160319304 160319624 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4179846 M 2 0 1 NOS1AP HuRef esv2758973 1 160331092 160769980 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756867,esv2757758 M 270 3 0 C1orf111,C1orf226,MIR4654,MIR556,NOS1AP,SH2D1B,UHMK1 NA12801,NA12812,NA18576 nsv831759 1 160340580 160445506 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1451050,nssv1451061 M 95 1 1 MIR4654,NOS1AP nsv818511 1 160343145 160612442 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417235 M 112 1 0 C1orf111,MIR4654,MIR556,NOS1AP NA18576 esv3348186 1 160346699 160346718 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596490 M 185 1 0 NOS1AP NA12287 esv3306499 1 160346707 160346708 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7809111,essv7832939,essv7788737,essv7795377,essv7819465,essv7803812,essv7787703,essv7782004,essv7791941,essv7834491,essv7812156,essv7792327,essv7793097,essv7786141,essv7816936,essv7779390,essv7770334,essv7832719,essv7824420,essv7805944,essv7806984,essv7775330,essv7815608,essv7778136,essv7794878,essv7818165,essv7820972,essv7810727,essv7804267,essv7822473,essv7819612,essv7813546,essv7784359,essv7807902,essv7771418,essv7796421,essv7780345 M 185 37 0 NOS1AP NA06986,NA10847,NA12249,NA12287,NA12750,NA18489,NA18498,NA18501,NA18502,NA18505,NA18511,NA18519,NA18523,NA18550,NA18558,NA18566,NA18570,NA18572,NA18577,NA18579,NA18592,NA18603,NA18605,NA18856,NA18907,NA18909,NA18912,NA18916,NA18945,NA18949,NA18970,NA19099,NA19102,NA19114,NA19129,NA19225,NA19257 esv3340175 1 160346709 160346721 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901434,essv8901444,essv8901451,essv8901432,essv8901454,essv8901464,essv8901437,essv8901438,essv8901462,essv8901468,essv8901449,essv8901465,essv8901460,essv8901469,essv8901450,essv8901461,essv8901441,essv8901440,essv8901456,essv8901446,essv8901457,essv8901463,essv8901453,essv8901471,essv8901452,essv8901433,essv8901466,essv8901467,essv8901455,essv8901458,essv8901435,essv8901442,essv8901445,essv8901439,essv8901443 M 185 35 0 NOS1AP NA06986,NA10847,NA12249,NA12750,NA18489,NA18498,NA18501,NA18502,NA18505,NA18511,NA18519,NA18523,NA18550,NA18558,NA18566,NA18570,NA18572,NA18577,NA18579,NA18592,NA18603,NA18605,NA18856,NA18907,NA18909,NA18912,NA18916,NA18945,NA18949,NA19099,NA19102,NA19114,NA19129,NA19225,NA19257 esv34209 1 160355955 160643940 CNV gain Pinto_et_al_2007 17911159 SNP array essv6979589,essv6979588,essv6986899,essv6979587,essv6990384 M 771 5 0 C1orf111,C1orf226,MIR4654,MIR556,NOS1AP,SH2D1B NA18576 nsv516482 1 160374743 161141819 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv696338,nssv697575,nssv668654,nssv662445,nssv673362,nssv702375,nssv696690,nssv705937,nssv705301,nssv654684,nssv654585,nssv678768 M 2026 4 8 C1orf110,C1orf111,C1orf226,DDR2,HSD17B7,MIR4654,MIR556,NOS1AP,SH2D1B,UAP1,UHMK1 esv34749 1 160406966 160450417 CNV gain Pinto_et_al_2007 17911159 SNP array essv6978960,essv6986751 M 771 2 0 NOS1AP NA12812 dgv456n100 1 160414945 160447193 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008884,nsv1008242,nsv1014788,nsv1010649 M 29084 7 0 NOS1AP nsv818522 1 160422610 160440019 CNV gain Wang_et_al_2007 17921354 SNP array nssv1416024 M 112 1 0 NOS1AP NA12812 dgv41n27 1 160422610 160445771 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv464217,nsv464228 M 1557 2 0 NOS1AP 1780854101_A,NINDS_57 dgv608n54 1 160422610 160445771 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548079,nsv548080 M 17421 2 0 NOS1AP 1780854101_A,NINDS_57 nsv1001433 1 160427121 160445790 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485751 M 29084 1 0 NOS1AP nsv818533 1 160435892 160440019 CNV gain Wang_et_al_2007 17921354 SNP array nssv1416025 M 112 1 0 NOS1AP NA12801 nsv946472 1 160443086 160444169 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802411,nssv1802445,nssv1802412,nssv1802486,nssv1802409,nssv1802436,nssv1802404,nssv1802482,nssv1802471,nssv1802467,nssv1802405,nssv1802456,nssv1802398,nssv1802431,nssv1802396,nssv1802460,nssv1802395,nssv1802429,nssv1802420,nssv1802435,nssv1802397,nssv1802425,nssv1802402,nssv1802483,nssv1802473,nssv1802487,nssv1802417,nssv1802453,nssv1802474,nssv1802418,nssv1802414,nssv1802437,nssv1802403,nssv1802452,nssv1802469,nssv1802444,nssv1802399,nssv1802481,nssv1802407,nssv1802488,nssv1802476,nssv1802448,nssv1802406,nssv1802442,nssv1802400,nssv1802451,nssv1802410,nssv1802461,nssv1802393,nssv1802419,nssv1802472,nssv1802465,nssv1802394,nssv1802484,nssv1802413,nssv1802430,nssv1802475,nssv1802464,nssv1802408,nssv1802449,nssv1802478,nssv1802443,nssv1802423,nssv1802459,nssv1802401,nssv1802450,nssv1802477,nssv1802432,nssv1802470,nssv1802434,nssv1802416,nssv1802455,nssv1802421,nssv1802446,nssv1802433,nssv1802428,nssv1802422,nssv1802458,nssv1802447,nssv1802439,nssv1802424,nssv1802479,nssv1802462,nssv1802415,nssv1802427,nssv1802438,nssv1802468,nssv1802480,nssv1802440,nssv1802441,nssv1802463,nssv1802457,nssv1802454,nssv1802426,nssv1802485,nssv1802392,nssv1802466 M 97 10 0 NOS1AP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1012248 1 160453555 160521367 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492843 M 29084 0 1 NOS1AP esv2653197 1 160496818 160498463 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5263840 M 1 0 1 NOS1AP NA18507 esv1930340 1 160497197 160498102 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4571313 M 1 0 1 NOS1AP NA18507 nsv825276 1 160497235 160497878 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430378,nssv1433453,nssv1423159,nssv1437896,nssv1439488,nssv1440157,nssv1437972,nssv1421485,nssv1424777 M 31 0 9 NOS1AP AK16,AK2,NA18526,NA18537,NA18547,NA18564,NA18951,NA18997,NA18999 esv3877 1 160497307 160498087 CNV loss Wang_et_al_2008 18987735 Sequencing essv26318 M 1 0 1 NOS1AP YH esv29246 1 160497369 160497846 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20435 M 40 0 1 NOS1AP NA18916 esv34183 1 160506331 160539290 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990703 M 270 0 0 NOS1AP esv3378650 1 160529621 160529655 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901473,essv8901472,essv8901474,essv8901477,essv8901476,essv8901475 M 185 6 0 NOS1AP NA11831,NA12154,NA12717,NA12763,NA18571,NA18608 esv3304648 1 160529631 160529632 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7748855,essv7760479,essv7757679,essv7754333,essv7740784,essv7749890 M 185 6 0 NOS1AP NA11831,NA12154,NA12717,NA12763,NA18571,NA18608 esv2761965 1 160547349 160562462 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7001699,essv7001710 M 1109 0 2 NOS1AP SW_1477,SW_1480 nsv8513 1 160618070 160621369 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv23080,nssv23087,nssv22087,nssv22431,nssv26552 M 31 5 0 C1orf226 NA11830,NA12155,NA18860,NA18975,NA19240 nsv159160 1 160743792 160745458 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177738 M 24 UHMK1 nsv946473 1 160765430 160766138 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1802505,nssv1803502,nssv1803497,nssv1802538,nssv1802506,nssv1802512,nssv1802503,nssv1802541,nssv1802504,nssv1802516,nssv1802502,nssv1803501,nssv1802496,nssv1802564,nssv1803495,nssv1802542,nssv1802501,nssv1802553,nssv1802495,nssv1802556,nssv1802492,nssv1802521,nssv1803496,nssv1802489,nssv1802517,nssv1802536,nssv1802494,nssv1802522,nssv1803494,nssv1802557,nssv1802514,nssv1802527,nssv1802566,nssv1802532,nssv1802508,nssv1803500,nssv1802490,nssv1802545,nssv1802497,nssv1802549,nssv1803498,nssv1802526,nssv1802507,nssv1802548,nssv1802518,nssv1802528,nssv1803492,nssv1802515,nssv1802500,nssv1802533,nssv1802493,nssv1802562,nssv1802499,nssv1802558,nssv1803493,nssv1802529,nssv1802511,nssv1803509,nssv1802510,nssv1802546,nssv1802509,nssv1802539,nssv1802491,nssv1803503,nssv1803499,nssv1802550,nssv1802498,nssv1802547,nssv1802520,nssv1803506,nssv1802567,nssv1802561,nssv1802513,nssv1802534,nssv1802525,nssv1802531,nssv1803507,nssv1802544,nssv1802543,nssv1802519,nssv1802555,nssv1802551,nssv1802523,nssv1802530,nssv1802554,nssv1802524,nssv1802565,nssv1803508,nssv1802559,nssv1803504,nssv1802540,nssv1802535,nssv1802560,nssv1802552,nssv1803505,nssv1802563,nssv1802537 M 97 10 0 UHMK1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv27514 1 160848403 160850569 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19699 M 40 2 0 "" NA19190,NA19225 nsv478620 1 160881986 160881986 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010891 M 9 1 0 DDR2 NA18507 nsv3299 1 160916245 160934120 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10310 M 9 1 0 DDR2 NA18956 esv3387297 1 161014160 161014208 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901479,essv8901484,essv8901478,essv8901485,essv8901482,essv8901480,essv8901487,essv8901483,essv8901486 M 185 9 0 DDR2 NA12156,NA12287,NA18498,NA18507,NA18858,NA18949,NA18952,NA18956,NA19108 nsv946475 1 161019392 161058321 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803533,nssv1803559,nssv1803530,nssv1803549,nssv1803529,nssv1803543,nssv1803534,nssv1803545,nssv1803536,nssv1803552,nssv1803562,nssv1803556,nssv1803570,nssv1803553,nssv1803563,nssv1803527,nssv1803550,nssv1803564,nssv1803542,nssv1803571,nssv1803567,nssv1803565,nssv1803558,nssv1803546,nssv1803551,nssv1803568,nssv1803531,nssv1803569,nssv1803554,nssv1803566,nssv1803560,nssv1803555,nssv1803541,nssv1803547,nssv1803532,nssv1803537,nssv1803539,nssv1803573,nssv1803561,nssv1803548,nssv1803544,nssv1803535,nssv1803528,nssv1803538,nssv1803540,nssv1803572,nssv1803574,nssv1803557 M 97 10 0 HSD17B7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1698857 1 161027946 161027946 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3590542 M 2 1 0 HSD17B7 HuRef nsv3310 1 161054079 161089489 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3464 M 9 1 0 "" NA12878 nsv548081 1 161065260 161104766 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727702 M 17421 0 1 C1orf110 nsv437251 1 161131100 161160940 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467132 M 60 0 1 "" NA19129 esv3309725 1 161131757 161131758 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839604 M 185 1 0 "" NA12878 esv3369026 1 161131763 161131782 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678340 M 185 1 0 "" NA12878 nsv437252 1 161140149 161160940 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467133 M 60 0 1 "" NA19132 nsv519874 1 161143781 161149540 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697098 M 2026 1 0 "" nsv516898 1 161153399 161159900 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv690262,nssv692739,nssv673701,nssv679886,nssv674520,nssv704813,nssv694279,nssv692911,nssv654745,nssv695540,nssv680688 M 2026 2 9 "" nsv437254 1 161154612 161160940 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467135 M 60 0 1 "" NA18872 nsv437253 1 161154612 161166987 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467134 M 60 0 1 "" NA18506 nsv438093 1 161159271 161159900 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469352,nssv469374,nssv469363,nssv469408,nssv469330,nssv469341,nssv469441,nssv469463,nssv469396,nssv469452,nssv469319,nssv469419,nssv469430,nssv469385 M 269 0 14 "" NA12740,NA12751,NA18506,NA18508,NA18871,NA18872,NA19116,NA19120,NA19127,NA19129,NA19131,NA19132,NA19238,NA19240 nsv522470 1 161163119 161166987 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705834 M 2026 0 1 "" esv2761951 1 161192277 161285821 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7001721 M 1109 0 1 "" SW_0102 nsv3321 1 161203199 161236664 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3474 M 9 1 0 "" NA12878 nsv3332 1 161309596 161341602 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3484 M 9 1 0 RGS4 NA12878 esv3890704 1 161340126 161469753 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787255 M 3017 0 1 RGS5 esv3365059 1 161355443 161355491 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673783,essv8673782 M 185 2 0 "" NA12878,NA12891 esv3309621 1 161355448 161355449 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837070,essv7837381 M 185 2 0 "" NA19239,NA19240 esv3387349 1 161355464 161355483 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596501 M 185 1 0 "" NA11894 esv3304394 1 161355473 161355474 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7797051,essv7778712,essv7791649,essv7794348,essv7803863,essv7826127,essv7828949,essv7798539,essv7818129,essv7801542,essv7832197,essv7784758,essv7781317,essv7790443,essv7825385,essv7821027,essv7777687,essv7808300,essv7815974,essv7820456,essv7821739,essv7813843,essv7797391,essv7836584,essv7771835,essv7835292,essv7800143,essv7780177,essv7777274,essv7783897,essv7789232,essv7785448 M 185 32 0 "" NA07051,NA11829,NA11881,NA11894,NA11918,NA11920,NA11992,NA12006,NA12717,NA12750,NA12751,NA12761,NA12763,NA12878,NA12891,NA18508,NA18510,NA18522,NA18526,NA18545,NA18558,NA18576,NA18870,NA18909,NA18973,NA19093,NA19108,NA19114,NA19138,NA19147,NA19190,NA19225 esv3355615 1 161355475 161355488 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901515,essv8901489,essv8901497,essv8901518,essv8901508,essv8901493,essv8901513,essv8901500,essv8901499,essv8901516,essv8901494,essv8901502,essv8901501,essv8901506,essv8901511,essv8901510,essv8901512,essv8901517,essv8901498,essv8901505,essv8901504,essv8901519,essv8901490,essv8901488,essv8901509,essv8901496,essv8901491,essv8901507,essv8901495 M 185 29 0 "" NA07051,NA11829,NA11881,NA11918,NA11920,NA11992,NA12006,NA12717,NA12750,NA12751,NA12761,NA12763,NA18508,NA18510,NA18522,NA18526,NA18545,NA18558,NA18576,NA18870,NA18909,NA18973,NA19093,NA19108,NA19114,NA19138,NA19147,NA19190,NA19225 nsv946476 1 161480543 161481926 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803584,nssv1803613,nssv1803651,nssv1803627,nssv1803591,nssv1803620,nssv1803592,nssv1803619,nssv1803652,nssv1803622,nssv1803585,nssv1803632,nssv1803604,nssv1803615,nssv1803649,nssv1803626,nssv1803653,nssv1803633,nssv1803580,nssv1803623,nssv1803594,nssv1803640,nssv1803597,nssv1803617,nssv1803587,nssv1803635,nssv1803645,nssv1803601,nssv1803581,nssv1803607,nssv1803576,nssv1803621,nssv1803578,nssv1803629,nssv1803600,nssv1803612,nssv1803603,nssv1803575,nssv1803593,nssv1803638,nssv1803589,nssv1803616,nssv1803650,nssv1803624,nssv1803583,nssv1803637,nssv1803646,nssv1803641,nssv1803595,nssv1803630,nssv1803582,nssv1803611,nssv1803590,nssv1803598,nssv1803579,nssv1803634,nssv1803647,nssv1803639,nssv1803648,nssv1803608,nssv1803596,nssv1803628,nssv1803654,nssv1803609,nssv1803577,nssv1803602,nssv1803599,nssv1803605,nssv1803588,nssv1803644,nssv1803606,nssv1803636,nssv1803586,nssv1803643,nssv1803614,nssv1803642,nssv1803631,nssv1803625,nssv1803618,nssv1803610 M 97 10 0 RGS5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3353974 1 161483869 161483888 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596512 M 185 1 0 RGS5 NA12287 nsv160306 1 161574673 161581055 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178884 M 24 NUF2 nsv831770 1 161607037 161775304 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451073 M 95 0 1 LOC100422212 esv2388123 1 161610347 161610737 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4960811 M 1 0 1 "" NA18507 esv2529490 1 161610481 161610562 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5234840 M 1 0 1 "" NA18507 esv1163797 1 161610496 161610568 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3648243 M 2 0 1 "" HuRef esv2761952 1 161615748 161626257 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7001732 M 1109 0 1 "" SW_0270 nsv523372 1 161673178 161688944 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699121 M 2026 0 1 "" nsv825287 1 161681762 161682270 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436364 M 31 0 1 "" NA18542 nsv548082 1 161685373 162108767 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727703 M 17421 1 0 "" nsv524883 1 161723585 161724069 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700889 M 2026 0 1 "" esv1113886 1 161738576 161738576 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3659853 M 2 1 0 "" HuRef esv2762196 1 161745106 161748864 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006617 M 1109 0 1 "" RW_0581 nsv476251 1 161772360 161772360 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017845 M 9 1 0 "" NA12878 nsv1009826 1 161804334 162049029 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489518 M 29084 0 1 "" nsv1004998 1 161823329 161863262 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489789 M 29084 1 0 "" nsv474233 1 161874059 161874059 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013484 M 9 1 0 "" NA18507 nsv3343 1 161887363 161926448 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4795,nssv2597 M 9 2 0 "" NA18555,NA19129 nsv548083 1 161888649 161984286 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727704,nssv727705 M 17421 0 2 "" esv3304594 1 161906300 161906301 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7821685 M 185 1 0 "" NA12812 esv3387758 1 161906300 161906340 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901601,essv8901606,essv8901598,essv8901605,essv8901608,essv8901597,essv8901599,essv8901600,essv8901604,essv8901602,essv8901607 M 185 11 0 "" NA12751,NA12828,NA18563,NA18582,NA18592,NA18593,NA18609,NA18638,NA18942,NA18945,NA18951 esv3352228 1 161906307 161906326 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596603 M 185 1 0 "" NA12812 esv1626476 1 161951309 161951309 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3727050 M 2 1 0 "" HuRef nsv1010525 1 161967721 162647580 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490241 M 29084 0 1 "" nsv522442 1 161982434 162031896 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705800 M 2026 0 1 "" nsv478746 1 161983869 161983869 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013440 M 9 1 0 "" NA18507 nsv478637 1 161991920 161991920 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013013 M 9 1 0 "" NA18507 dgv457n100 1 161999985 162158595 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006995,nsv1002510,nsv1014123,nsv1000322 M 29084 0 5 "" nsv999947 1 162009060 162072073 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482762 M 29084 0 1 "" esv3410000 1 162039407 162039471 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901610,essv8901609 M 185 2 0 "" NA18508,NA19190 esv3304291 1 162039415 162039416 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7744804,essv7759101 M 185 2 0 "" NA18508,NA19190 esv2218865 1 162048152 162048582 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4809630 M 1 0 1 "" NA18507 nsv1011742 1 162071341 162135808 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495335 M 29084 0 1 "" nsv548084 1 162073664 162132647 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727706 M 17421 0 1 "" nsv997822 1 162111202 162433731 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704810 M 29084 1 0 "" esv34034 1 162113502 162171777 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990717 M 270 0 0 "" nsv478550 1 162147025 162147025 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014705 M 9 1 0 "" NA18507 esv2538662 1 162151444 162152936 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5213308 M 1 0 1 "" NA18507 nsv831781 1 162168880 162330459 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1451106,nssv1451084,nssv1451095 M 95 3 0 "" dgv609n54 1 162187421 162333791 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548086,nsv548085 M 17421 0 2 "" dgv610n54 1 162259100 162474167 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548087,nsv548088 M 17421 2 0 "" esv3890715 1 162269994 162348679 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25783366,essv25797408 M 3017 0 2 "" nsv480206 1 162288998 162288998 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016388 M 9 0 0 "" esv1514467 1 162299493 162299493 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3629407 M 2 1 0 "" HuRef esv3358353 1 162307867 162307881 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863773 M 185 1 0 "" NA12005 nsv1006601 1 162340345 162398169 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704811 M 29084 0 1 "" nsv548089 1 162410741 162494687 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727711 M 17421 1 0 "" esv2445075 1 162442263 162443765 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5343397 M 1 0 1 "" NA18507 esv2269239 1 162442656 162443042 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4888268 M 1 0 1 "" NA18507 esv993183 1 162471400 162471400 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585495 M 3 1 0 "" HuRef nsv520400 1 162504226 162530434 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv663692,nssv692863 M 2026 2 0 "" esv3307533 1 162506174 162506175 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759814,essv7744294,essv7760404,essv7740589,essv7750537,essv7755092,essv7745303,essv7756323,essv7754787,essv7753992,essv7746952,essv7755706,essv7749660 M 185 13 0 "" NA18504,NA18510,NA18523,NA18853,NA18861,NA18912,NA19093,NA19108,NA19114,NA19116,NA19147,NA19172,NA19257 esv3325395 1 162506179 162506188 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901617,essv8901611,essv8901613,essv8901616,essv8901620,essv8901622,essv8901612,essv8901624,essv8901619,essv8901615,essv8901621,essv8901618,essv8901623 M 185 13 0 "" NA18504,NA18510,NA18523,NA18853,NA18861,NA18912,NA19093,NA19108,NA19114,NA19116,NA19147,NA19172,NA19257 nsv437235 1 162515744 162713803 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467116 M 60 0 1 "" NA10857 nsv3354 1 162562648 162597123 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3493 M 9 1 0 "" NA12878 nsv946477 1 162582936 162596095 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803671,nssv1805348,nssv1803684,nssv1805350,nssv1803672,nssv1803678,nssv1803658,nssv1803701,nssv1803660,nssv1805331,nssv1803679,nssv1803694,nssv1803664,nssv1805333,nssv1805346,nssv1803687,nssv1805339,nssv1803690,nssv1805343,nssv1803707,nssv1803667,nssv1803712,nssv1803674,nssv1803699,nssv1805345,nssv1803702,nssv1803656,nssv1805330,nssv1803661,nssv1805334,nssv1805338,nssv1803713,nssv1803683,nssv1805357,nssv1803669,nssv1805327,nssv1803673,nssv1803706,nssv1803663,nssv1803695,nssv1803680,nssv1803696,nssv1803677,nssv1803703,nssv1803670,nssv1803655,nssv1803659,nssv1803720,nssv1805340,nssv1805332,nssv1803662,nssv1803697,nssv1803668,nssv1803693,nssv1803675,nssv1805355,nssv1803686,nssv1805337,nssv1805341,nssv1805354,nssv1803676,nssv1803717,nssv1803666,nssv1805353,nssv1805342,nssv1803688,nssv1803657,nssv1803692,nssv1805344,nssv1803709,nssv1805347,nssv1805349,nssv1803665,nssv1803700,nssv1803704,nssv1805356,nssv1803718,nssv1803710,nssv1803714,nssv1803681,nssv1803708,nssv1803719,nssv1805351,nssv1805328,nssv1803715,nssv1805329,nssv1805352,nssv1805336,nssv1803682,nssv1805335,nssv1803691,nssv1803689,nssv1803716,nssv1803711,nssv1803705,nssv1803685,nssv1803698 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1000565 1 162612430 162635216 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500648 M 29084 1 0 "" esv275481 1 162617092 162617695 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585563,essv2585577 M 1250 1 1 "" esv2645894 1 162645496 162646877 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5178105 M 1 0 1 "" NA18507 nsv516000 1 162647580 162655215 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv670411,nssv674293,nssv665656 M 2026 0 3 "" nsv524999 1 162652314 162662472 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701030 M 2026 0 1 "" esv22382 1 162656169 162657037 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19814 M 40 0 1 "" NA18909 esv3890726 1 162662472 162681365 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785812 M 3017 0 1 "" esv2636261 1 162675497 162676446 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5370262 M 1 1 0 "" NA18507 esv3339959 1 162675781 162676488 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652047 M 185 1 0 "" NA19240 esv2420664 1 162702333 162702710 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4499385 M 1 0 1 "" NA18507 nsv831792 1 162713493 162895123 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1451117,nssv1451128 M 95 1 1 PBX1 nsv1011090 1 162747864 163332617 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494319 M 29084 1 0 LOC100505795,PBX1 esv3406031 1 162750432 162750451 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678343 M 185 1 0 "" NA19240 nsv998419 1 162868962 162896022 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499035 M 29084 1 0 PBX1 nsv479227 1 162936642 162936642 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016754 M 9 0 0 PBX1 esv3401993 1 163009393 163009412 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596614 M 185 1 0 LOC100505795,PBX1 NA12873 nsv472711 1 163111881 163111881 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010869 M 9 1 0 "" NA18555 esv1991981 1 163117025 163117419 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4658957 M 1 0 1 "" NA18507 nsv946478 1 163156468 163158496 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805387,nssv1805855,nssv1805362,nssv1805860,nssv1805365,nssv1805866,nssv1805373,nssv1805884,nssv1805881,nssv1805870,nssv1805374,nssv1805408,nssv1805364,nssv1805888,nssv1805382,nssv1805859,nssv1805375,nssv1805862,nssv1805359,nssv1805409,nssv1805367,nssv1805869,nssv1805383,nssv1805410,nssv1805873,nssv1805852,nssv1805874,nssv1805863,nssv1805371,nssv1805402,nssv1805369,nssv1805857,nssv1805361,nssv1805407,nssv1805377,nssv1805404,nssv1805879,nssv1805388,nssv1805876,nssv1805394,nssv1805872,nssv1805851,nssv1805880,nssv1805868,nssv1805376,nssv1805385,nssv1805366,nssv1805412,nssv1805380,nssv1805393,nssv1805363,nssv1805397,nssv1805378,nssv1805891,nssv1805360,nssv1805867,nssv1805368,nssv1805864,nssv1805370,nssv1805358,nssv1805877,nssv1805406,nssv1805878,nssv1805390,nssv1805389,nssv1805871,nssv1805875,nssv1805853,nssv1805386,nssv1805403,nssv1805379,nssv1805861,nssv1805372,nssv1805887,nssv1805883,nssv1805398,nssv1805854,nssv1805889,nssv1805396,nssv1805381,nssv1805401,nssv1805399,nssv1805850,nssv1805384,nssv1805886,nssv1805882,nssv1805885,nssv1805395,nssv1805856,nssv1805405,nssv1805400,nssv1805858,nssv1805411,nssv1805890,nssv1805391,nssv1805865,nssv1805392 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1476698 1 163256343 163256394 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4105523 M 2 0 1 "" HuRef nsv825298 1 163279982 163281173 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1425537 M 31 0 1 "" AK4 nsv1001453 1 163327560 163364441 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485777 M 29084 0 1 "" nsv475149 1 163372683 163372683 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011921 M 9 1 0 "" NA19240 nsv473996 1 163399633 163399633 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010887 M 9 1 0 "" NA12156 nsv3365 1 163405806 163429816 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1662 M 9 1 0 "" NA19240 esv1005410 1 163583793 163583877 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580235 M 3 0 1 LMX1A HuRef esv1310421 1 163583794 163583879 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3646110 M 2 0 1 LMX1A HuRef nsv506963 1 163599340 163605340 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619252 M 4 0 0 "" NA10860 esv2758974 1 163684150 163692160 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756868 M 270 0 3 "" NA18515,NA18516,NA19222 nsv8524 1 163687901 163691598 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv27037 M 31 0 1 "" NA19221 esv2764223 1 163688252 163690794 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006619,essv7006624,essv7006621,essv7006627,essv7006618,essv7006623,essv7006620,essv7006625,essv7006626 M 1109 0 9 "" RW_0032,RW_0100,RW_0111,RW_0139,RW_0238,RW_0512,RW_0525,RW_0532,RW_0664 esv25633 1 163688428 163690833 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12585 M 40 0 1 "" NA19190 esv2421711 1 163688498 163690794 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5130654,essv5110414,essv5052329,essv5013914,essv5017163,essv5112680,essv5028908,essv5026466,essv5113630,essv5097627,essv5097010,essv5050989,essv5133143,essv5102949,essv5099394,essv5107829 M 1184 0 16 "" NA18515,NA18516,NA18868,NA18869,NA19096,NA19150,NA19151,NA19190,NA19221,NA19222,NA19223,NA20348,NA21295,NA21403,NA21404,NA21414 nsv441718 1 163688498 163690794 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656799,nssv1656800,nssv1656802,nssv1656803,nssv1656801 M 270 0 5 "" NA18515,NA18516,NA19221,NA19222,NA19223 nsv3376 1 163749746 163784447 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1671 M 9 1 0 LOC400794,LRRC52 NA19240 esv993172 1 163772502 163772502 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569480 M 3 1 0 LOC400794 HuRef esv1117485 1 163772503 163772503 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3746897 M 2 1 0 LOC400794 HuRef esv3384985 1 163772503 163772503 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823171 M 185 1 0 LOC400794 NA12878 esv3323222 1 163798543 163798573 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901628,essv8901626,essv8901630,essv8901627,essv8901629 M 185 5 0 LOC400794,LRRC52 NA18526,NA18562,NA18570,NA18572,NA18949 esv3307100 1 163798546 163798547 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7762045,essv7746206,essv7748063,essv7741925,essv7760802 M 185 5 0 LOC400794,LRRC52 NA18526,NA18562,NA18570,NA18572,NA18949 nsv3387 1 163808794 163826002 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7755 M 9 1 0 LOC400794 NA12156 nsv946479 1 163816470 163819703 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805896,nssv1805942,nssv1805906,nssv1805924,nssv1805978,nssv1805940,nssv1805908,nssv1805962,nssv1805909,nssv1805931,nssv1805901,nssv1805983,nssv1805970,nssv1805925,nssv1805899,nssv1805963,nssv1805971,nssv1805952,nssv1805916,nssv1805956,nssv1805907,nssv1805922,nssv1805923,nssv1805915,nssv1805912,nssv1805966,nssv1805913,nssv1805967,nssv1805921,nssv1805959,nssv1805903,nssv1805954,nssv1805911,nssv1805949,nssv1805973,nssv1805892,nssv1805969,nssv1805944,nssv1805976,nssv1805939,nssv1805910,nssv1805965,nssv1805898,nssv1805981,nssv1805895,nssv1805961,nssv1805900,nssv1805930,nssv1805975,nssv1805935,nssv1805977,nssv1805918,nssv1805917,nssv1805934,nssv1805893,nssv1805948,nssv1805974,nssv1805933,nssv1805902,nssv1805988,nssv1805904,nssv1805964,nssv1805905,nssv1805945,nssv1805894,nssv1805936,nssv1805972,nssv1805985,nssv1805920,nssv1805960,nssv1805914,nssv1805950,nssv1805897,nssv1805957,nssv1805926,nssv1805943,nssv1805932,nssv1805980,nssv1805929,nssv1805984,nssv1805982,nssv1805955,nssv1805938,nssv1805951,nssv1805986,nssv1805968,nssv1805919,nssv1805947,nssv1805937,nssv1805979,nssv1805958,nssv1805941,nssv1805927,nssv1805953,nssv1805946,nssv1805928,nssv1805987 M 97 10 0 LOC400794 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1383555 1 163818552 163818552 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3709335 M 2 1 0 "" HuRef esv2279760 1 163818595 163819086 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4675961 M 1 0 1 "" NA18507 esv1071388 1 163818805 163819003 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4040025 M 2 0 1 "" HuRef esv1123882 1 163819088 163819088 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3888734 M 2 1 0 "" HuRef esv3303837 1 163819758 163819759 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7810111,essv7770278,essv7814364,essv7786859,essv7781461,essv7806701,essv7777043,essv7795988,essv7796525,essv7794528,essv7778983,essv7819661,essv7830870,essv7798182,essv7788296,essv7780746,essv7795728,essv7808887,essv7776324,essv7808010,essv7802896,essv7821871,essv7776662,essv7824637 M 185 24 0 "" NA07037,NA07357,NA11829,NA11919,NA11995,NA12156,NA12287,NA12489,NA18526,NA18545,NA18550,NA18561,NA18566,NA18579,NA18603,NA18605,NA18608,NA18638,NA18943,NA18952,NA18964,NA18965,NA18980,NA19093 esv3340024 1 163819758 163819767 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901635,essv8901649,essv8901641,essv8901656,essv8901634,essv8901653,essv8901650,essv8901639,essv8901644,essv8901643,essv8901645,essv8901648,essv8901655,essv8901652,essv8901640,essv8901632,essv8901637,essv8901646,essv8901651,essv8901631,essv8901654,essv8901642,essv8901633,essv8901638 M 185 24 0 "" NA07037,NA07357,NA11829,NA11919,NA11995,NA12156,NA12287,NA12489,NA18526,NA18545,NA18550,NA18561,NA18566,NA18579,NA18603,NA18605,NA18608,NA18638,NA18943,NA18952,NA18964,NA18965,NA18980,NA19093 esv3369668 1 163819759 163819778 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596625 M 185 1 0 "" NA12872 nsv548090 1 163869148 163871615 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727712 M 17421 0 1 MGST3 dgv611n54 1 163869913 163870864 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548091,nsv548092 M 17421 0 3 MGST3 esv28160 1 163870187 163871072 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15720 M 40 0 4 MGST3 NA11993,NA12004,NA12414,NA18909 dgv612n54 1 163870284 163870864 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548094,nsv548093,nsv548095 M 17421 0 7 MGST3 nsv548096 1 163870490 163871413 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727723 M 17421 0 1 MGST3 nsv946481 1 163905684 163912893 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805993,nssv1806022,nssv1805992,nssv1806035,nssv1806003,nssv1806019,nssv1805998,nssv1806079,nssv1805996,nssv1806059,nssv1806020,nssv1806037,nssv1806071,nssv1806080,nssv1806075,nssv1806050,nssv1806006,nssv1806021,nssv1806011,nssv1806052,nssv1806066,nssv1806043,nssv1806018,nssv1806056,nssv1806067,nssv1806024,nssv1806009,nssv1806038,nssv1806068,nssv1806060,nssv1806013,nssv1806064,nssv1806010,nssv1806025,nssv1806002,nssv1806028,nssv1805999,nssv1806063,nssv1805991,nssv1806082,nssv1806072,nssv1806053,nssv1806008,nssv1806034,nssv1806004,nssv1806033,nssv1806007,nssv1806049,nssv1806070,nssv1806041,nssv1806000,nssv1806012,nssv1806073,nssv1806062,nssv1805995,nssv1806078,nssv1805997,nssv1806032,nssv1806014,nssv1806081,nssv1806005,nssv1806061,nssv1806001,nssv1806058,nssv1806069,nssv1806015,nssv1805990,nssv1806051,nssv1806074,nssv1806046,nssv1806017,nssv1806030,nssv1805994,nssv1806057,nssv1805989,nssv1806045,nssv1806027,nssv1806077,nssv1806085,nssv1806047,nssv1806031,nssv1806036,nssv1806042,nssv1806083,nssv1806029,nssv1806065,nssv1806016,nssv1806040,nssv1806084,nssv1806055,nssv1806048,nssv1806044,nssv1806023,nssv1806076,nssv1806026,nssv1806054,nssv1806039 M 97 10 0 ALDH9A1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv33411 1 163915533 163915947 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95198,essv96497,essv94816,essv94593,essv96637,essv97340,essv93283,essv96957,essv100130,essv99235,essv94299,essv93524,essv101243,essv96004,essv96116 M 51 0 15 ALDH9A1 21618,21721,21791,21817,21879,21932,22007,22011,22127,22128,22170,22261,22275,22286,22394 esv33567 1 163915533 163917071 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98585,essv99455 M 51 0 2 ALDH9A1 22085,22335 esv2555363 1 163925273 163926219 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5294020 M 1 1 0 ALDH9A1 NA18507 esv1624307 1 163925930 163925930 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4029930 M 2 1 0 ALDH9A1 HuRef nsv518886 1 163980811 164008270 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696345 M 2026 1 0 TMCO1 esv2520993 1 163997462 163998928 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5250564 M 1 0 1 TMCO1 NA18507 esv2177447 1 163997649 163998330 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4759381 M 1 0 1 TMCO1 NA18507 esv6923 1 163997715 163998238 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29364 M 1 0 0 TMCO1 esv5064 1 163997827 163998285 CNV loss Wang_et_al_2008 18987735 Sequencing essv27505 M 1 0 1 TMCO1 YH nsv159176 1 163997870 163998149 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177754 M 24 TMCO1 nsv517792 1 164052127 164078353 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv690750,nssv653274 M 2026 0 2 UCK2 nsv946482 1 164054412 164056732 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1806090,nssv1806152,nssv1806165,nssv1806123,nssv1806164,nssv1806181,nssv1806093,nssv1806176,nssv1806168,nssv1806118,nssv1806172,nssv1806113,nssv1806100,nssv1806140,nssv1806103,nssv1806156,nssv1806102,nssv1806132,nssv1806105,nssv1806147,nssv1806088,nssv1806177,nssv1806096,nssv1806153,nssv1806095,nssv1806119,nssv1806092,nssv1806160,nssv1806106,nssv1806134,nssv1806110,nssv1806109,nssv1806099,nssv1806149,nssv1806107,nssv1806130,nssv1806169,nssv1806135,nssv1806101,nssv1806161,nssv1806117,nssv1806157,nssv1806167,nssv1806122,nssv1806163,nssv1806116,nssv1806104,nssv1806125,nssv1806170,nssv1806146,nssv1806094,nssv1806121,nssv1806089,nssv1806150,nssv1806098,nssv1806131,nssv1806111,nssv1806159,nssv1806108,nssv1806138,nssv1806166,nssv1806179,nssv1806115,nssv1806086,nssv1806171,nssv1806158,nssv1806114,nssv1806175,nssv1806087,nssv1806144,nssv1806097,nssv1806112,nssv1806091,nssv1806148,nssv1806129,nssv1806143,nssv1806155,nssv1806142,nssv1806151,nssv1806127,nssv1806124,nssv1806133,nssv1806174,nssv1806137,nssv1806182,nssv1806178,nssv1806154,nssv1806141,nssv1806128,nssv1806180,nssv1806120,nssv1806139,nssv1806126,nssv1806145,nssv1806173,nssv1806162,nssv1806136 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv818544 1 164064590 164078353 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417712 M 112 1 0 UCK2 NA18999 nsv548097 1 164064590 164091790 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727724 M 17421 0 1 UCK2 nsv437246 1 164089515 164127437 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467127 M 60 0 1 UCK2 NA12753 esv3366243 1 164117216 164117263 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7862104 M 185 1 0 UCK2 NA18871 esv2553540 1 164155600 164157463 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5163160 M 1 0 1 "" NA18507 nsv520206 1 164170586 164180398 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704968,nssv692343,nssv661788,nssv698363 M 2026 0 4 "" esv24717 1 164179665 164181965 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21395 M 40 0 1 "" NA11993 nsv946483 1 164258055 164258889 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1806203,nssv1806238,nssv1806187,nssv1806233,nssv1806190,nssv1806220,nssv1806269,nssv1806277,nssv1806197,nssv1806249,nssv1806199,nssv1806234,nssv1806192,nssv1806217,nssv1806200,nssv1806278,nssv1806193,nssv1806210,nssv1806268,nssv1806273,nssv1806266,nssv1806229,nssv1806186,nssv1806247,nssv1806262,nssv1806215,nssv1806198,nssv1806219,nssv1806189,nssv1806216,nssv1806207,nssv1806250,nssv1806204,nssv1806244,nssv1806196,nssv1806248,nssv1806185,nssv1806253,nssv1806184,nssv1806237,nssv1806194,nssv1806274,nssv1806191,nssv1806254,nssv1806202,nssv1806232,nssv1806264,nssv1806222,nssv1806260,nssv1806206,nssv1806201,nssv1806213,nssv1806267,nssv1806258,nssv1806261,nssv1806231,nssv1806214,nssv1806257,nssv1806212,nssv1806218,nssv1806205,nssv1806227,nssv1806195,nssv1806246,nssv1806265,nssv1806270,nssv1806263,nssv1806183,nssv1806208,nssv1806239,nssv1806211,nssv1806226,nssv1806188,nssv1806272,nssv1806256,nssv1806255,nssv1806243,nssv1806209,nssv1806252,nssv1806228,nssv1806221,nssv1806240,nssv1806224,nssv1806275,nssv1806245,nssv1806230,nssv1806241,nssv1806235,nssv1806279,nssv1806251,nssv1806236,nssv1806225,nssv1806276,nssv1806223,nssv1806242,nssv1806259,nssv1806271 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv475739 1 164320289 164320289 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011863 M 9 1 0 FAM78B NA12878 nsv159546 1 164428328 164428328 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178124 M 24 "" nsv1012972 1 164433319 164473097 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493969 M 29084 1 0 "" dgv458n100 1 164440993 164495010 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009639,nsv998231 M 29084 2 0 "" nsv3398 1 164442179 164457801 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9374,nssv4806 M 9 2 0 "" NA18517,NA19129 nsv473036 1 164443066 164443066 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019689 M 9 1 0 "" NA19129 esv26934 1 164447056 164463611 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18239 M 40 4 0 "" NA18502,NA18858,NA18861,NA19129 esv3428795 1 164447352 164449650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692009 M 185 1 0 "" NA19238 nsv442271 1 164451105 164460994 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1618965,nssv1618974,nssv1618981,nssv1618969,nssv1618973,nssv1618978,nssv1618975,nssv1618982,nssv1618961,nssv1618977,nssv1618980,nssv1618971,nssv1618970,nssv1618972,nssv1618976,nssv1618962,nssv1618979,nssv1618963,nssv1618968,nssv1618964,nssv1618966,nssv1618967 M 270 22 0 "" NA18500,NA18502,NA18507,NA18856,NA18857,NA18858,NA18859,NA18860,NA18861,NA18870,NA18872,NA19116,NA19119,NA19120,NA19127,NA19128,NA19129,NA19152,NA19172,NA19221,NA19222,NA19238 esv2764214 1 164451105 164462326 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006628,essv7006631,essv7006632,essv7006629,essv7006630 M 1109 5 0 "" RW_0003,RW_0179,RW_0254,RW_0273,RW_0533 nsv517576 1 164453091 164458301 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv660817,nssv652416 M 2026 2 0 "" esv3367746 1 164458052 164459350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692010 M 185 1 0 "" NA19238 dgv18n21 1 164523455 164530867 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv525333,nsv529043 M 2026 0 2 "" nsv519423 1 164542624 164564475 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696845 M 2026 0 1 "" nsv527245 1 164584438 164584851 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703647 M 2026 0 1 "" esv1115539 1 164605591 164605591 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3621988 M 2 1 0 "" HuRef esv6516 1 164635080 164638013 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28957 M 1 0 0 "" nsv946484 1 164725152 164728274 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804041,nssv1804078,nssv1804799,nssv1804802,nssv1804049,nssv1804095,nssv1804028,nssv1804094,nssv1804042,nssv1804099,nssv1804035,nssv1804059,nssv1804031,nssv1804055,nssv1804047,nssv1804089,nssv1804036,nssv1804083,nssv1804797,nssv1804092,nssv1804798,nssv1804088,nssv1804102,nssv1804809,nssv1804107,nssv1804061,nssv1804106,nssv1804052,nssv1804044,nssv1804072,nssv1804026,nssv1804808,nssv1804032,nssv1804801,nssv1804030,nssv1804058,nssv1804040,nssv1804085,nssv1804053,nssv1804093,nssv1804037,nssv1804081,nssv1804103,nssv1804068,nssv1804054,nssv1804805,nssv1804043,nssv1804086,nssv1804033,nssv1804077,nssv1804027,nssv1804807,nssv1804038,nssv1804082,nssv1804039,nssv1804075,nssv1804056,nssv1804098,nssv1804029,nssv1804057,nssv1804034,nssv1804804,nssv1804105,nssv1804064,nssv1804046,nssv1804067,nssv1804050,nssv1804048,nssv1804104,nssv1804096,nssv1804800,nssv1804069,nssv1804045,nssv1804090,nssv1804080,nssv1804076,nssv1804063,nssv1804101,nssv1804100,nssv1804065,nssv1804066,nssv1804097,nssv1804060,nssv1804079,nssv1804084,nssv1806280,nssv1804062,nssv1804803,nssv1804091,nssv1804071,nssv1804810,nssv1804073,nssv1804087,nssv1804070,nssv1804806,nssv1804074,nssv1804051 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2758975 1 164758503 164917609 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756869,esv2757759 M 270 0 2 FMO9P NA18524,NA18571 esv3890737 1 164802822 164878837 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780951,essv25785290,essv25780576,essv25780896,essv25787182,essv25798977 M 3017 0 6 FMO9P esv34401 1 164812966 164884225 CNV loss Pinto_et_al_2007 17911159 SNP array essv6988144,essv6979291,essv6989081,essv6979290 M 771 0 4 FMO9P NA18524 esv2639979 1 164817997 164819738 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5293844 M 1 0 1 "" NA18507 esv2264278 1 164818021 164819352 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4532821 M 1 0 1 "" NA18507 esv22499 1 164818207 164819426 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20922 M 40 0 4 "" NA18502,NA18861,NA19099,NA19147 nsv548098 1 164861833 164889804 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727725 M 17421 0 1 "" nsv946485 1 164980019 164984202 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804815,nssv1804848,nssv1804889,nssv1804870,nssv1804827,nssv1804903,nssv1804890,nssv1804851,nssv1804894,nssv1804887,nssv1804821,nssv1804877,nssv1804828,nssv1804811,nssv1804835,nssv1804841,nssv1804896,nssv1804898,nssv1804824,nssv1804881,nssv1804831,nssv1804852,nssv1804818,nssv1804899,nssv1804833,nssv1804864,nssv1804842,nssv1804879,nssv1804812,nssv1804905,nssv1804895,nssv1804866,nssv1804892,nssv1804861,nssv1804893,nssv1804869,nssv1804830,nssv1804876,nssv1804814,nssv1804906,nssv1804888,nssv1804845,nssv1804813,nssv1804843,nssv1804823,nssv1804858,nssv1804820,nssv1804902,nssv1804819,nssv1804872,nssv1804816,nssv1804863,nssv1804825,nssv1804886,nssv1804836,nssv1804901,nssv1804839,nssv1804878,nssv1804829,nssv1804867,nssv1804840,nssv1804847,nssv1804891,nssv1804834,nssv1804817,nssv1804885,nssv1804826,nssv1804857,nssv1804832,nssv1804862,nssv1804897,nssv1804838,nssv1804822,nssv1804844,nssv1804837,nssv1804850,nssv1804855,nssv1804882,nssv1804865,nssv1804871,nssv1804868,nssv1804856,nssv1804874,nssv1804860,nssv1804883,nssv1804859,nssv1804873,nssv1804849,nssv1804853,nssv1804884,nssv1804900,nssv1804907,nssv1804880,nssv1804875,nssv1804854,nssv1804904,nssv1804846 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv519275 1 165025166 165033674 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv655163,nssv673387,nssv661096,nssv689533,nssv671803,nssv698745,nssv691052 M 2026 0 7 "" nsv1004148 1 165218493 165282935 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487690 M 29084 1 0 MAEL esv2750815 1 165220490 165446966 CNV gain Pinto_et_al_2007 17911159 SNP array essv6982399,essv6988531,essv6986157,essv6982401,essv6982400 M 771 5 0 DUSP27,GPA33,MAEL BEC_437 nsv528049 1 165270163 165276707 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704581 M 2026 0 1 "" nsv519114 1 165270163 165281808 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696590 M 2026 1 0 "" esv3392289 1 165291825 165293058 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652048 M 185 1 0 GPA33 NA19240 esv2649114 1 165292131 165292546 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5253996 M 1 1 0 GPA33 NA18507 esv1004965 1 165300680 165314560 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564875 M 3 0 1 GPA33 HuRef nsv1008831 1 165354137 165372408 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502282 M 29084 1 0 DUSP27 nsv3410 1 165365450 165396812 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11119 M 9 1 0 "" NA15510 nsv946486 1 165397208 165398693 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804912,nssv1804982,nssv1804930,nssv1804975,nssv1804986,nssv1804954,nssv1804990,nssv1804935,nssv1804924,nssv1804965,nssv1804910,nssv1804961,nssv1804925,nssv1804972,nssv1804939,nssv1804951,nssv1804923,nssv1805002,nssv1804987,nssv1804967,nssv1804932,nssv1804970,nssv1804921,nssv1805000,nssv1804928,nssv1804996,nssv1804927,nssv1804908,nssv1804992,nssv1804984,nssv1804917,nssv1804949,nssv1804909,nssv1804938,nssv1804915,nssv1804974,nssv1804989,nssv1804999,nssv1804985,nssv1804978,nssv1804911,nssv1804963,nssv1804926,nssv1804995,nssv1804918,nssv1804976,nssv1804916,nssv1804931,nssv1804920,nssv1804973,nssv1804993,nssv1805003,nssv1804913,nssv1804940,nssv1804922,nssv1804944,nssv1804936,nssv1804966,nssv1804988,nssv1804960,nssv1804991,nssv1804945,nssv1804919,nssv1804942,nssv1804933,nssv1804964,nssv1804937,nssv1804998,nssv1804929,nssv1804958,nssv1804994,nssv1804943,nssv1804914,nssv1804969,nssv1804983,nssv1804941,nssv1804962,nssv1804948,nssv1805001,nssv1804934,nssv1804955,nssv1804952,nssv1804959,nssv1804977,nssv1804957,nssv1805004,nssv1804979,nssv1804947,nssv1804980,nssv1804946,nssv1804968,nssv1804956,nssv1804971,nssv1804997,nssv1804953,nssv1804981,nssv1804950 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509557 1 165400797 165446665 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619819,nssv617997,nssv623805,nssv621107 M 4 4 0 "" CHM,NA10860,NA15510,NA18994 nsv480524 1 165403097 165403097 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020532 M 9 0 0 "" nsv480529 1 165404485 165404485 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013198 M 9 0 0 "" nsv521232 1 165427583 165624185 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv698681,nssv686755,nssv688320 M 2026 2 1 POU2F1 nsv3421 1 165430385 165459990 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7762,nssv10331,nssv9886,nssv3501,nssv2704 M 9 5 0 POU2F1 NA12156,NA12878,NA18507,NA18555,NA18956 esv1008198 1 165438373 165442852 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565163 M 3 1 0 "" HuRef nsv831803 1 165451341 165632401 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451139 M 95 0 1 POU2F1 nsv1014857 1 165469768 165504288 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704812 M 29084 1 0 POU2F1 nsv1000229 1 165500193 165551821 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483072 M 29084 0 1 POU2F1 esv3890749 1 165615175 165682415 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25787888,essv25787885 M 3017 2 0 CD247,POU2F1 nsv831814 1 165616458 165826835 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451150 M 95 0 1 CD247,CREG1,POU2F1 nsv3432 1 165654727 165688501 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7770 M 9 1 0 CD247,POU2F1 NA12156 esv998064 1 165670770 165670868 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3582383 M 3 0 1 CD247 HuRef esv1365494 1 165670806 165670905 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4197281 M 2 0 1 CD247 HuRef nsv528248 1 165674697 165698481 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704814 M 2026 0 1 CD247 nsv528710 1 165704577 165836354 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705360 M 2026 1 0 CD247,CREG1 nsv528380 1 165737441 165742495 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704969 M 2026 0 1 CD247 nsv161050 1 165771949 165772718 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179628 M 24 "" esv3304751 1 165772719 165772720 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7752476,essv7762790,essv7749981,essv7759468,essv7757654,essv7744443,essv7748916,essv7753067,essv7757852,essv7761044,essv7759447,essv7761209,essv7755289,essv7745211,essv7745616,essv7746624,essv7751857,essv7748949,essv7748010,essv7756642,essv7748263,essv7760606,essv7757437,essv7742101,essv7744952,essv7762446,essv7753202,essv7756976,essv7744225,essv7747296 M 185 30 0 "" NA07346,NA07347,NA10847,NA11829,NA11894,NA12761,NA18510,NA18542,NA18550,NA18552,NA18555,NA18561,NA18562,NA18563,NA18564,NA18566,NA18571,NA18573,NA18577,NA18582,NA18592,NA18593,NA18605,NA18608,NA18638,NA18940,NA18944,NA18959,NA18973,NA19138 esv3337892 1 165772724 165772736 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901733,essv8901728,essv8901712,essv8901718,essv8901724,essv8901740,essv8901732,essv8901730,essv8901722,essv8901723,essv8901716,essv8901741,essv8901709,essv8901717,essv8901713,essv8901739,essv8901734,essv8901729,essv8901715,essv8901719,essv8901721,essv8901735,essv8901710,essv8901737,essv8901731,essv8901726,essv8901720,essv8901711,essv8901727,essv8901738 M 185 30 0 "" NA07346,NA07347,NA10847,NA11829,NA11894,NA12761,NA18510,NA18542,NA18550,NA18552,NA18555,NA18561,NA18562,NA18563,NA18564,NA18566,NA18571,NA18573,NA18577,NA18582,NA18592,NA18593,NA18605,NA18608,NA18638,NA18940,NA18944,NA18959,NA18973,NA19138 nsv819670 1 165777414 165778114 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419063 M 2 0 1 CREG1 AK1 esv27585 1 165792653 165793593 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20453 M 40 0 1 "" NA18907 esv27627 1 165802604 165803417 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20122 M 40 0 1 "" NA19099 nsv478807 1 165970560 165970560 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013566 M 9 1 0 MPZL1 NA18507 esv3383726 1 165979477 165979496 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596636 M 185 1 0 MPZL1 NA11881 nsv523174 1 166026789 166031549 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698886 M 2026 0 1 MPZL1 nsv1002698 1 166027113 166100735 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704813 M 29084 0 1 ADCY10,MPZL1 dgv613n54 1 166027355 166033764 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548100,nsv548099 M 17421 0 2 MPZL1 dgv614n54 1 166031549 166033764 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548101,nsv548102 M 17421 0 4 "" esv29497 1 166031981 166033855 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14109 M 40 0 3 "" NA11931,NA11993,NA11995 dgv615n54 1 166032008 166033764 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548113,nsv548116,nsv548103,nsv548104,nsv548107,nsv548105,nsv548106 M 17421 0 35 "" dgv616n54 1 166032008 166038638 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548114,nsv548117,nsv548123,nsv548110,nsv548130,nsv548108 M 17421 0 7 "" dgv617n54 1 166032111 166033543 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548115,nsv548112,nsv548111,nsv548118,nsv548109 M 17421 0 8 "" nsv548119 1 166032807 166033414 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727780 M 17421 0 1 "" dgv618n54 1 166032807 166033764 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548120,nsv548121,nsv548122 M 17421 0 7 "" dgv619n54 1 166032963 166033651 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548125,nsv548124,nsv548127,nsv548126 M 17421 0 5 "" dgv620n54 1 166033026 166033764 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548128,nsv548129,nsv548131 M 17421 0 4 "" esv3330175 1 166044752 166045950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692011 M 185 1 0 ADCY10 NA19239 esv32660 1 166061707 166456848 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv92865,essv99942,essv100902,essv93891,essv92600 M 51 0 5 ADCY10,DCAF6,GPR161,MPC2,TIPRL 21634,21656,21939,22086,22233 nsv527119 1 166086153 166088837 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703502 M 2026 0 1 ADCY10 nsv464239 1 166092109 166143240 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540184 M 1557 0 1 ADCY10 1780854016_A nsv548132 1 166092109 166143240 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173220 M 17421 0 1 ADCY10 1780854016_A esv3309011 1 166125277 166125278 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838110,essv7838316 M 185 2 0 ADCY10 NA12878,NA12891 esv3427330 1 166125289 166125400 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673791,essv8673792 M 185 2 0 ADCY10 NA19239,NA19240 esv3328988 1 166125296 166125315 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596647,essv9596658 M 185 2 0 ADCY10 NA11881,NA12043 esv2572362 1 166165573 166166914 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5318478 M 1 0 1 MPC2 NA18507 nsv478534 1 166248739 166248739 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013095 M 9 1 0 DCAF6 NA18507 nsv1012959 1 166251866 166303359 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497080,nssv3497876 M 29084 0 2 DCAF6 nsv946487 1 166289261 166292396 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805012,nssv1805062,nssv1805009,nssv1805050,nssv1805084,nssv1805046,nssv1805024,nssv1805095,nssv1805021,nssv1805074,nssv1805022,nssv1805096,nssv1805006,nssv1805065,nssv1805029,nssv1805069,nssv1805018,nssv1805101,nssv1805027,nssv1805097,nssv1805020,nssv1805035,nssv1805089,nssv1805048,nssv1805025,nssv1805064,nssv1805011,nssv1805032,nssv1805088,nssv1805092,nssv1805015,nssv1805039,nssv1805083,nssv1805071,nssv1805014,nssv1805093,nssv1805086,nssv1805051,nssv1805082,nssv1805099,nssv1805023,nssv1805060,nssv1805087,nssv1805081,nssv1805036,nssv1805005,nssv1805008,nssv1805075,nssv1805013,nssv1805042,nssv1805017,nssv1805073,nssv1805019,nssv1805063,nssv1805090,nssv1805100,nssv1805010,nssv1805058,nssv1805033,nssv1805056,nssv1805085,nssv1805041,nssv1805016,nssv1805053,nssv1805007,nssv1805057,nssv1805091,nssv1805031,nssv1805026,nssv1805076,nssv1805030,nssv1805047,nssv1805034,nssv1805037,nssv1805070,nssv1805061,nssv1805072,nssv1805055,nssv1805079,nssv1805028,nssv1805038,nssv1805080,nssv1805098,nssv1805059,nssv1805040,nssv1805049,nssv1805052,nssv1805044,nssv1805043,nssv1805078,nssv1805054,nssv1805068,nssv1805067,nssv1805077,nssv1805066,nssv1805094,nssv1805045 M 97 10 0 DCAF6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2497978 1 166290444 166292856 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5268928 M 1 0 1 DCAF6 NA18507 esv8761 1 166290929 166292593 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31202 M 1 0 0 DCAF6 esv2312150 1 166291000 166292550 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4561571 M 1 0 1 DCAF6 NA18507 esv996972 1 166291186 166292358 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569353 M 3 0 1 DCAF6 HuRef esv1732326 1 166291198 166292371 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4290313 M 2 0 1 DCAF6 HuRef nsv506964 1 166315290 166321290 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620670 M 4 0 0 GPR161 NA15510 nsv441719 1 166355739 166358038 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656805,nssv1656804 M 270 0 2 GPR161 NA18532,NA18943 nsv825309 1 166356665 166358054 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1426423 M 31 0 1 GPR161 AK6 nsv946489 1 166438000 166452692 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805417,nssv1805508,nssv1805419,nssv1805449,nssv1805424,nssv1805504,nssv1805425,nssv1805452,nssv1805427,nssv1805465,nssv1805431,nssv1805441,nssv1805432,nssv1805511,nssv1805498,nssv1805485,nssv1805418,nssv1805488,nssv1805440,nssv1805466,nssv1805439,nssv1805487,nssv1805422,nssv1805484,nssv1805444,nssv1805459,nssv1805428,nssv1805477,nssv1805497,nssv1805509,nssv1805499,nssv1805461,nssv1805416,nssv1805469,nssv1805426,nssv1805451,nssv1805434,nssv1805507,nssv1805496,nssv1805450,nssv1805493,nssv1805486,nssv1805492,nssv1805491,nssv1805430,nssv1805478,nssv1805494,nssv1805474,nssv1805433,nssv1805442,nssv1805500,nssv1805473,nssv1805423,nssv1805467,nssv1805421,nssv1805415,nssv1805435,nssv1805476,nssv1805437,nssv1805454,nssv1805495,nssv1805481,nssv1805420,nssv1805503,nssv1805443,nssv1805470,nssv1805446,nssv1805502,nssv1805436,nssv1805438,nssv1805501,nssv1805479,nssv1805429,nssv1805445,nssv1805472,nssv1805475,nssv1805506,nssv1805463,nssv1805510,nssv1805462,nssv1805455,nssv1805460,nssv1805464,nssv1805458,nssv1805453,nssv1805505,nssv1805447,nssv1805482,nssv1805490,nssv1805480,nssv1805489,nssv1805457,nssv1805468,nssv1805456,nssv1805483,nssv1805448,nssv1805471 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831825 1 166445799 166619686 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1451161,nssv1451172,nssv1451184 M 95 2 1 ANKRD36BP1,MIR557,SFT2D2,TBX19 nsv1002007 1 166446087 166642597 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483276 M 29084 1 0 ANKRD36BP1,LOC100505918,MIR557,SFT2D2,TBX19 nsv946490 1 166482148 166482648 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805519,nssv1805793,nssv1805516,nssv1805773,nssv1805817,nssv1805764,nssv1805528,nssv1805782,nssv1805814,nssv1805798,nssv1805529,nssv1805791,nssv1805762,nssv1805788,nssv1805518,nssv1805805,nssv1805810,nssv1805774,nssv1805536,nssv1805769,nssv1805525,nssv1805820,nssv1805514,nssv1805787,nssv1805513,nssv1805776,nssv1805523,nssv1805772,nssv1805521,nssv1805538,nssv1805537,nssv1805781,nssv1805531,nssv1805804,nssv1805515,nssv1805778,nssv1805533,nssv1805539,nssv1805813,nssv1805799,nssv1805815,nssv1805768,nssv1805808,nssv1805784,nssv1805530,nssv1805800,nssv1805809,nssv1805803,nssv1805816,nssv1805771,nssv1805520,nssv1805765,nssv1805527,nssv1805796,nssv1805532,nssv1805827,nssv1805524,nssv1805790,nssv1805522,nssv1805786,nssv1805534,nssv1805767,nssv1805517,nssv1805823,nssv1805812,nssv1805789,nssv1805811,nssv1805775,nssv1805540,nssv1805819,nssv1805526,nssv1805818,nssv1805541,nssv1805825,nssv1805807,nssv1805797,nssv1805785,nssv1805512,nssv1805826,nssv1805792,nssv1805806,nssv1805783,nssv1805770,nssv1805801,nssv1805777,nssv1805761,nssv1805802,nssv1805535,nssv1805794,nssv1805779,nssv1805824,nssv1805780,nssv1805795,nssv1805822,nssv1805821,nssv1805763,nssv1805766 M 97 10 0 ANKRD36BP1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv21971 1 166555073 166556795 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11540 M 40 0 1 "" NA11995 nsv548133 1 166555199 166556771 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727799 M 17421 0 1 "" nsv480012 1 166591592 166591592 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020296 M 9 0 0 "" nsv1013200 1 166599354 166624383 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496951 M 29084 1 0 MIR557 nsv818556 1 166604693 166609973 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417967 M 112 0 1 "" NA07357 nsv527576 1 166607891 166608490 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704037 M 2026 0 1 "" nsv512747 1 166630949 166631476 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625374 M 1 1 0 "" 1 esv2495811 1 166631133 166631540 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5389957 M 1 1 0 "" NA18507 esv3369604 1 166631346 166631498 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652049 M 185 1 0 "" NA19240 esv1678226 1 166631360 166631360 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4261545 M 2 1 0 "" HuRef esv3310432 1 166631361 166631361 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843428,essv7843432,essv7843430,essv7843427 M 185 4 0 "" NA12878,NA19238,NA19239,NA19240 esv3336066 1 166631361 166631361 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8699411 M 185 1 0 "" NA12878 esv998321 1 166643615 166647135 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563878 M 3 1 0 LOC100505918 HuRef esv2532981 1 166646182 166646606 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5273350 M 1 1 0 LOC100505918 NA18507 nsv512748 1 166646259 166646489 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625375 M 1 1 0 LOC100505918 1 esv3417208 1 166646269 166646419 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808926 M 185 1 0 LOC100505918 NA12878 nsv506965 1 166685747 166691747 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623286,nssv620671 M 4 0 0 "" NA15510,NA18994 nsv946492 1 166685771 166686489 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1805842,nssv1806333,nssv1805848,nssv1806325,nssv1806342,nssv1806309,nssv1805832,nssv1806354,nssv1805838,nssv1806286,nssv1806281,nssv1806307,nssv1805835,nssv1806353,nssv1805844,nssv1806299,nssv1806345,nssv1806352,nssv1805845,nssv1806314,nssv1805839,nssv1806296,nssv1805837,nssv1806310,nssv1806344,nssv1806335,nssv1805849,nssv1806349,nssv1805830,nssv1806293,nssv1805831,nssv1806282,nssv1806288,nssv1806294,nssv1806338,nssv1806346,nssv1806283,nssv1806291,nssv1805841,nssv1806292,nssv1805847,nssv1806320,nssv1806337,nssv1806350,nssv1806341,nssv1806303,nssv1806340,nssv1806295,nssv1806336,nssv1806308,nssv1805829,nssv1806324,nssv1805846,nssv1806289,nssv1806343,nssv1806313,nssv1805843,nssv1806298,nssv1805836,nssv1806326,nssv1806290,nssv1806329,nssv1806287,nssv1806305,nssv1805834,nssv1806334,nssv1805840,nssv1806330,nssv1806339,nssv1806323,nssv1806284,nssv1806327,nssv1805833,nssv1806331,nssv1806322,nssv1806316,nssv1806348,nssv1806332,nssv1806328,nssv1806285,nssv1806319,nssv1806315,nssv1806311,nssv1806347,nssv1806351,nssv1806302,nssv1806317,nssv1806304,nssv1806297,nssv1806306,nssv1806300,nssv1806321,nssv1806318,nssv1806312,nssv1806301,nssv1805828,nssv1806355 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2500882 1 166692922 166696311 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5236152 M 1 0 1 "" NA18507 esv2188881 1 166693505 166695627 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4686840 M 1 0 1 "" NA18507 nsv512749 1 166707254 166708092 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625378 M 1 1 0 "" 1 esv3443456 1 166707309 166708196 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652051 M 185 1 0 "" NA19240 esv1412395 1 166707923 166707923 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3830315 M 2 1 0 "" HuRef esv1377781 1 166707968 166707968 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3784121 M 2 1 0 "" HuRef esv32664 1 166725196 166725905 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv97969 M 51 0 1 "" 21837 nsv477656 1 166755027 166755027 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015974 M 9 1 0 "" NA18517 nsv946493 1 166777489 166781240 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1806385,nssv1806444,nssv1806358,nssv1806397,nssv1806360,nssv1806403,nssv1806370,nssv1806411,nssv1806366,nssv1806448,nssv1806363,nssv1806452,nssv1806372,nssv1806402,nssv1806442,nssv1806406,nssv1806373,nssv1806422,nssv1806377,nssv1806396,nssv1806435,nssv1806449,nssv1806441,nssv1806356,nssv1806436,nssv1806450,nssv1806362,nssv1806407,nssv1806380,nssv1806443,nssv1806369,nssv1806408,nssv1806375,nssv1806388,nssv1806378,nssv1806390,nssv1806359,nssv1806432,nssv1806437,nssv1806446,nssv1806433,nssv1806393,nssv1806387,nssv1806451,nssv1806384,nssv1806392,nssv1806374,nssv1806424,nssv1806367,nssv1806386,nssv1806440,nssv1806405,nssv1806364,nssv1806389,nssv1806371,nssv1806447,nssv1806439,nssv1806398,nssv1806381,nssv1806417,nssv1806438,nssv1806410,nssv1806365,nssv1806423,nssv1806376,nssv1806383,nssv1806434,nssv1806430,nssv1806357,nssv1806379,nssv1806368,nssv1806404,nssv1806361,nssv1806415,nssv1806431,nssv1806395,nssv1806391,nssv1806420,nssv1806419,nssv1806400,nssv1806445,nssv1806427,nssv1806426,nssv1806421,nssv1806429,nssv1806409,nssv1806413,nssv1806416,nssv1806399,nssv1806425,nssv1806428,nssv1806382,nssv1806414,nssv1806412,nssv1806401,nssv1806418,nssv1806394 M 97 10 0 XCL2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv831836 1 166805403 166983580 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1451195,nssv1451206 M 95 1 1 DPT,XCL1 nsv946494 1 166814564 166816152 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1806455,nssv1806519,nssv1806457,nssv1806509,nssv1806478,nssv1806541,nssv1806463,nssv1806545,nssv1806481,nssv1806494,nssv1806531,nssv1806549,nssv1806473,nssv1806505,nssv1806469,nssv1806498,nssv1806475,nssv1806503,nssv1806470,nssv1806506,nssv1806539,nssv1806512,nssv1806467,nssv1806508,nssv1806462,nssv1806540,nssv1806460,nssv1806493,nssv1806482,nssv1806547,nssv1806532,nssv1806453,nssv1806466,nssv1806504,nssv1806477,nssv1806495,nssv1806530,nssv1806520,nssv1806535,nssv1806487,nssv1806454,nssv1806502,nssv1806459,nssv1806483,nssv1806536,nssv1806546,nssv1806472,nssv1806544,nssv1806456,nssv1806548,nssv1806534,nssv1806543,nssv1806474,nssv1806521,nssv1806471,nssv1806490,nssv1806538,nssv1806486,nssv1806537,nssv1806479,nssv1806464,nssv1806529,nssv1806468,nssv1806499,nssv1806461,nssv1806517,nssv1806458,nssv1806528,nssv1806465,nssv1806489,nssv1806533,nssv1806507,nssv1806484,nssv1806476,nssv1806480,nssv1806491,nssv1806496,nssv1806485,nssv1806488,nssv1806500,nssv1806497,nssv1806515,nssv1806524,nssv1806501,nssv1806527,nssv1806514,nssv1806542,nssv1806516,nssv1806523,nssv1806492,nssv1806522,nssv1806510,nssv1806513,nssv1806526,nssv1806518,nssv1806511,nssv1806525 M 97 10 0 XCL1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26553 1 166838889 166841321 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19741 M 40 0 1 "" NA12489 dgv621n54 1 166838921 166840908 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548140,nsv548139,nsv548138,nsv548134,nsv548135,nsv548137,nsv548136 M 17421 0 27 "" dgv622n54 1 166839483 166840806 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548143,nsv548144,nsv548142,nsv548141 M 17421 0 6 "" nsv3443 1 166844206 166888929 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7779 M 9 0 1 "" NA12156 nsv1001684 1 166903246 166930022 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501035 M 29084 1 0 "" nsv946495 1 166912882 166914065 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1806563,nssv1806593,nssv1806572,nssv1806591,nssv1806633,nssv1806607,nssv1806554,nssv1806576,nssv1806578,nssv1806606,nssv1806557,nssv1806592,nssv1806566,nssv1806610,nssv1806555,nssv1806643,nssv1806567,nssv1806638,nssv1806636,nssv1806609,nssv1806564,nssv1806615,nssv1806628,nssv1806642,nssv1806632,nssv1806646,nssv1806575,nssv1806603,nssv1806629,nssv1806620,nssv1806574,nssv1806588,nssv1806579,nssv1806583,nssv1806552,nssv1806605,nssv1806569,nssv1806600,nssv1806571,nssv1806616,nssv1806560,nssv1806612,nssv1806631,nssv1806637,nssv1806635,nssv1806584,nssv1806627,nssv1806645,nssv1806561,nssv1806601,nssv1806568,nssv1806644,nssv1806551,nssv1806640,nssv1806634,nssv1806595,nssv1806581,nssv1806590,nssv1806556,nssv1806602,nssv1806558,nssv1806621,nssv1806565,nssv1806550,nssv1806559,nssv1806597,nssv1806570,nssv1806641,nssv1806630,nssv1806582,nssv1806562,nssv1806617,nssv1806553,nssv1806625,nssv1806604,nssv1806598,nssv1806577,nssv1806587,nssv1806639,nssv1806586,nssv1806618,nssv1806580,nssv1806585,nssv1806622,nssv1806626,nssv1806624,nssv1806611,nssv1806573,nssv1806599,nssv1806596,nssv1806623,nssv1806619,nssv1806594,nssv1806614,nssv1806613,nssv1806608,nssv1806589 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv525556 1 166920481 166928976 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701695 M 2026 1 0 "" nsv819134 1 166924841 166925838 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419149 M 2 1 0 "" AK1 nsv831847 1 166936501 167116753 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1451217 M 95 1 0 DPT,LINC00626 esv7719 1 167003352 167003527 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30160 M 1 0 0 "" nsv464250 1 167039017 167092656 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540194 M 1557 0 1 "" HGDP00251 nsv548145 1 167039017 167092656 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173221 M 17421 0 1 "" HGDP00251 esv3382183 1 167083597 167083645 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901742,essv8901743 M 185 2 0 "" NA18516,NA18853 esv3304521 1 167083614 167083615 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7754052,essv7749387 M 185 2 0 "" NA18516,NA18853 nsv528885 1 167087372 167092656 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705566 M 2026 0 1 "" nsv437258 1 167090735 167157044 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467139 M 60 0 1 LINC00970 NA07348 nsv508043 1 167124767 167130767 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618512 M 4 0 0 "" CHM esv1381365 1 167264731 167264783 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4083882 M 2 0 1 LINC00970 HuRef nsv548146 1 167266733 167273306 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727833 M 17421 0 1 LINC00970 dgv623n54 1 167269223 167271762 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548148,nsv548147 M 17421 0 8 LINC00970 nsv820513 1 167270761 167272006 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420736 M 1 0 1 LINC00970 NA10851 nsv825320 1 167270761 167272006 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430379,nssv1424778 M 31 0 2 LINC00970 AK16,AK2 nsv819267 1 167270838 167278445 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419833 M 2 1 0 LINC00970 AK1 dgv86n67 1 167270950 167271725 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825365,nsv825331 M 31 3 0 LINC00970 AK20,AK4,NA18947 dgv87n67 1 167270950 167271946 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825353,nsv825342 M 31 18 0 LINC00970 AK14,AK18,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18564,NA18570,NA18582,NA18942,NA18949,NA18951,NA18968,NA18969,NA18973,NA18999 esv22990 1 167270951 167271957 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11394 M 40 24 0 LINC00970 NA06985,NA11993,NA12287,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240 dgv624n54 1 167271018 167271762 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548151,nsv548150,nsv548149,nsv548153,nsv548155,nsv548154 M 17421 0 123 LINC00970 nsv548152 1 167271018 167271928 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv727949,nssv727948 M 17421 0 2 LINC00970 esv33957 1 167271199 167271734 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94917,essv93413,essv97876,essv93445,essv96190,essv95195,essv96641,essv101676,essv95391,essv97292,essv101181 M 51 0 11 LINC00970 21618,21721,21837,21872,21879,21909,22007,22011,22128,22170,22231 nsv831858 1 167289007 167445692 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1451228 M 95 1 0 ATP1B1,LINC00970,NME7 esv2147293 1 167291195 167291631 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4790257 M 1 0 1 LINC00970 NA18507 esv2459366 1 167325028 167326003 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5224625 M 1 1 0 "" NA18507 esv3326502 1 167325091 167325650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652052 M 185 1 0 "" NA19240 esv1439397 1 167325607 167325607 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4011483 M 2 1 0 "" HuRef nsv160013 1 167325608 167325608 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178591 M 24 "" esv22143 1 167326252 167887892 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17936,esv10418,esv15526 M 40 21 2 ATP1B1,BLZF1,CCDC181,F5,NME7,SELP,SLC19A2 NA07037,NA12004,NA12006,NA12156,NA12749,NA12878,NA18502,NA18505,NA18508,NA18511,NA18517,NA18858,NA18861,NA18907,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19240,NA19257 nsv477399 1 167392865 167392865 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013651 M 9 1 0 NME7 NA18517 esv5790 1 167426408 167427207 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28231 M 1 0 0 NME7 esv4017 1 167426581 167427114 CNV loss Wang_et_al_2008 18987735 Sequencing essv26458 M 1 0 1 NME7 YH esv1001229 1 167426648 167426976 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568362 M 3 0 1 NME7 HuRef esv1106459 1 167426661 167426990 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4197163 M 2 0 1 NME7 HuRef nsv1010010 1 167456210 167614169 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704814 M 29084 1 0 BLZF1,NME7 nsv525520 1 167458484 167506708 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701653 M 2026 0 1 NME7 nsv508044 1 167462959 167468959 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622298,nssv624222 M 4 0 0 NME7 NA10860,NA18994 dgv459n100 1 167470178 167538416 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009170,nsv1000254 M 29084 2 0 NME7 esv1007713 1 167481425 167520095 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586048 M 3 0 1 NME7 HuRef nsv508637 1 167481544 167534702 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618990 M 4 0 1 NME7 NA10860 nsv947448 1 167483290 167506391 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764710,nssv2760835,nssv2763928,nssv2759183 M 97 0 4 NME7 HGDP00456,HGDP00521,HGDP00665,HGDP01307 nsv820717 1 167487042 167520752 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420747 M 1 0 1 NME7 NA10851 nsv825376 1 167487042 167521307 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1426425,nssv1432419,nssv1424372,nssv1437975,nssv1434204,nssv1428852,nssv1435684,nssv1421487,nssv1439490,nssv1431110,nssv1423989 M 31 0 11 NME7 AK12,AK18,AK6,NA18537,NA18566,NA18570,NA18582,NA18947,NA18951,NA18972,NA18997 esv993090 1 167487482 167516026 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564771 M 3 0 1 NME7 HuRef nsv820118 1 167488547 167514350 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418702 M 2 1 0 NME7 AK1 esv2421693 1 167493526 167508390 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5063912,essv5069689,essv5116360,essv5107541,essv5044137,essv5100871,essv5148086,essv5043012,essv5152177,essv5109452,essv5038476,essv5118596,essv5136549,essv5034902,essv5056560,essv5062751,essv5020493,essv5006394,essv5139420,essv5141293,essv5060510,essv5007207,essv5143857,essv5057761,essv5050259,essv5091806,essv5089570,essv5018557,essv5008299,essv5131805,essv5052146,essv5078251,essv5148195,essv5136090,essv5033643,essv5091816,essv5130175,essv5054273,essv5043491,essv5080030,essv5075621,essv5040184,essv5026207,essv5153465,essv5142911,essv5158370,essv5094030,essv5094302,essv5059590,essv5127833,essv5007493,essv5004321,essv5120302,essv5039159,essv5052881,essv5096996,essv5117803,essv5117094,essv5023985,essv5158339,essv5072082,essv5114122,essv5005298,essv5109893,essv5160235,essv5099667,essv5045426,essv5088716,essv5020799,essv5083868,essv5138615,essv5081409,essv5096368,essv5123767,essv5026234,essv5058004,essv5058515,essv5077548,essv5012251,essv5023113,essv5015425,essv5054036,essv5077829,essv5052156,essv5012071,essv5153317,essv5007371,essv5068399,essv5112108,essv5157473,essv5100991,essv5124496,essv5122887,essv5042316,essv5033104,essv5149991,essv5114383,essv5072762,essv5017596,essv5097720,essv5089498,essv5011261,essv5137938,essv5138529,essv5154437,essv5045627,essv5012180,essv5078881,essv5126340,essv5159570,essv5092776,essv5011332,essv5067124,essv5019089,essv5056689,essv5097309,essv5005616,essv5160267,essv5035609,essv5092929,essv5092187,essv5040426,essv5006109,essv5102410,essv5071550,essv5150341,essv5098574,essv5157855,essv5003743,essv5024019,essv5015747,essv5131958,essv5046489,essv5003232,essv5031771,essv5038630,essv5002413,essv5028986,essv5027227,essv5081410,essv5028934,essv5060036,essv5080296,essv5013563,essv5015841,essv5075415,essv5029172,essv5025364,essv5117771,essv5142812,essv5008498,essv5157426,essv5055252,essv5007041,essv5038682,essv5142416,essv5005601,essv5065044,essv5151894,essv5085043,essv5095449,essv5127813,essv5099269,essv5035536,essv5087875,essv5076354,essv5066419,essv5138268,essv5119387,essv5139505,essv5094454,essv5026275,essv5015069,essv5060981,essv5103891,essv5032013,essv5134904,essv5052324,essv5036106,essv5033522,essv5140165,essv5146602,essv5078500,essv5040078,essv5074044,essv5020781,essv5047500,essv5048670,essv5001897,essv5081448,essv5037575,essv5114033,essv5084447,essv5102616,essv5050266,essv5147493,essv5011304,essv5106737,essv5019790,essv5067582,essv5030382,essv5055286,essv5017995,essv5095828,essv5002683,essv5132992,essv5045745,essv5138540,essv5147575,essv5014421,essv5156043,essv5025888,essv5051416,essv5019924,essv5055608,essv5009220,essv5127681,essv5093659,essv5097366,essv5096063,essv5074104,essv5054421,essv5113052,essv5012226,essv5099902,essv5101208,essv5060193,essv5047583,essv5077386,essv5104367,essv5069055,essv5057106,essv5056143,essv5129675,essv5106049,essv5073894,essv5142074,essv5112249,essv5025795,essv5005312,essv5081909,essv5035176,essv5146532,essv5034873,essv5022247,essv5133658,essv5083972,essv5109262,essv5144038,essv5134479,essv5035794,essv5160702,essv5151387,essv5067111,essv5058081,essv5140501,essv5118477,essv5016204,essv5110896,essv5105793,essv5098929,essv5157781,essv5138750,essv5122436,essv5139423,essv5089070,essv5143080,essv5159213,essv5060368,essv5159351,essv5031124,essv5113557,essv5041294,essv5130339,essv5027867,essv5094929,essv5149516,essv5037514,essv5080013,essv5136535,essv5068971,essv5141138,essv5009674,essv5032292,essv5082837,essv5021953,essv5142180,essv5003206,essv5098839,essv5116313,essv5034443,essv5080919,essv5156492,essv5091004,essv5067560,essv5145015,essv5090395,essv5126472,essv5024789,essv5057564,essv5023578,essv5159670,essv5086087,essv5078679,essv5152703,essv5134925,essv5140432,essv5111736,essv5146772,essv5012228,essv5038915,essv5120977,essv5100296,essv5007680,essv5037904,essv5017021,essv5115477,essv5078447,essv5144981,essv5026308,essv5048574,essv5149184,essv5039862,essv5110213,essv5054314,essv5111298,essv5114935,essv5086557,essv5089783,essv5043655,essv5001916,essv5067919,essv5042710,essv5042441,essv5107318,essv5009588,essv5043247,essv5100741,essv5076606,essv5112957,essv5092376,essv5155642,essv5088954,essv5157966,essv5087643,essv5009063,essv5069260,essv5130346,essv5086798,essv5002905,essv5034350,essv5143236,essv5147507,essv5136539,essv5033410,essv5105923,essv5044443,essv5077745,essv5068534,essv5007360,essv5014820,essv5033699,essv5096703,essv5071398,essv5159809,essv5126459,essv5148120,essv5148489,essv5060342,essv5049482,essv5140250,essv5103402,essv5088891,essv5057196,essv5076200,essv5098084,essv5089871,essv5095292,essv5118009,essv5002264,essv5032270,essv5092963,essv5075532,essv5043201,essv5140364,essv5159600,essv5040979,essv5048917,essv5153746,essv5108179,essv5086920,essv5113559,essv5148450,essv5145391,essv5104300,essv5108979,essv5083494,essv5057035,essv5139540,essv5154221,essv5146776,essv5038143,essv5114797,essv5118459,essv5119774,essv5105016,essv5093520,essv5031588,essv5068147,essv5135656,essv5123166,essv5082497,essv5014422 M 1184 0 413 NME7 NA06984,NA06985,NA06986,NA06989,NA06991,NA07000,NA07014,NA07022,NA07029,NA07045,NA07051,NA07055,NA07346,NA07347,NA07349,NA10830,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10850,NA10853,NA10855,NA10856,NA10861,NA10864,NA11829,NA11830,NA11831,NA11832,NA11843,NA11881,NA11891,NA11892,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11931,NA11993,NA11994,NA11995,NA12003,NA12006,NA12044,NA12045,NA12057,NA12154,NA12234,NA12239,NA12248,NA12264,NA12272,NA12273,NA12275,NA12282,NA12287,NA12340,NA12343,NA12344,NA12347,NA12375,NA12376,NA12383,NA12413,NA12489,NA12546,NA12707,NA12708,NA12716,NA12740,NA12751,NA12752,NA12760,NA12776,NA12777,NA12778,NA12813,NA12827,NA12828,NA12830,NA12832,NA12842,NA12843,NA12865,NA12875,NA12877,NA12889,NA12890,NA12892,NA17962,NA17982,NA17989,NA17996,NA17997,NA18102,NA18120,NA18125,NA18128,NA18132,NA18135,NA18136,NA18148,NA18150,NA18155,NA18497,NA18498,NA18536,NA18537,NA18546,NA18555,NA18557,NA18559,NA18566,NA18570,NA18571,NA18576,NA18582,NA18593,NA18605,NA18614,NA18617,NA18619,NA18627,NA18631,NA18632,NA18633,NA18634,NA18635,NA18640,NA18647,NA18694,NA18696,NA18702,NA18747,NA18853,NA18854,NA18862,NA18863,NA18868,NA18869,NA18870,NA18872,NA18909,NA18911,NA18940,NA18945,NA18947,NA18948,NA18951,NA18962,NA18963,NA18966,NA18980,NA18997,NA18998,NA19046,NA19054,NA19065,NA19068,NA19070,NA19075,NA19107,NA19109,NA19119,NA19137,NA19144,NA19150,NA19151,NA19159,NA19172,NA19173,NA19185,NA19186,NA19224,NA19225,NA19307,NA19308,NA19313,NA19324,NA19327,NA19332,NA19350,NA19360,NA19372,NA19373,NA19374,NA19375,NA19377,NA19379,NA19385,NA19429,NA19445,NA19449,NA19451,NA19452,NA19471,NA19649,NA19650,NA19658,NA19660,NA19661,NA19662,NA19664,NA19665,NA19669,NA19676,NA19679,NA19682,NA19685,NA19686,NA19700,NA19719,NA19721,NA19722,NA19724,NA19749,NA19751,NA19760,NA19761,NA19763,NA19777,NA19779,NA19788,NA19789,NA19790,NA19795,NA19818,NA19819,NA19835,NA19904,NA19909,NA19917,NA20126,NA20127,NA20128,NA20129,NA20276,NA20277,NA20284,NA20289,NA20290,NA20322,NA20340,NA20342,NA20505,NA20509,NA20510,NA20517,NA20519,NA20520,NA20521,NA20524,NA20527,NA20529,NA20530,NA20531,NA20534,NA20535,NA20538,NA20541,NA20542,NA20543,NA20544,NA20581,NA20582,NA20588,NA20589,NA20752,NA20754,NA20755,NA20757,NA20758,NA20761,NA20765,NA20769,NA20771,NA20772,NA20773,NA20787,NA20790,NA20796,NA20797,NA20799,NA20800,NA20801,NA20804,NA20806,NA20808,NA20809,NA20812,NA20819,NA20828,NA20845,NA20846,NA20847,NA20850,NA20852,NA20853,NA20859,NA20861,NA20866,NA20871,NA20879,NA20884,NA20889,NA20896,NA20897,NA20902,NA20906,NA20908,NA21090,NA21091,NA21097,NA21101,NA21103,NA21105,NA21107,NA21113,NA21115,NA21117,NA21118,NA21119,NA21125,NA21143,NA21144,NA21297,NA21302,NA21303,NA21308,NA21309,NA21313,NA21316,NA21317,NA21333,NA21336,NA21339,NA21344,NA21353,NA21362,NA21363,NA21365,NA21368,NA21379,NA21381,NA21384,NA21385,NA21386,NA21387,NA21388,NA21389,NA21391,NA21399,NA21403,NA21404,NA21408,NA21418,NA21420,NA21436,NA21438,NA21440,NA21441,NA21442,NA21454,NA21455,NA21457,NA21473,NA21478,NA21479,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21512,NA21513,NA21514,NA21517,NA21520,NA21526,NA21527,NA21528,NA21574,NA21578,NA21580,NA21583,NA21597,NA21608,NA21614,NA21615,NA21619,NA21620,NA21634,NA21635,NA21636,NA21647,NA21648,NA21650,NA21678,NA21683,NA21686,NA21689,NA21693,NA21719,NA21722,NA21768,NA21826 nsv511149 1 167493551 167514903 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625989 M 1 0 1 NME7 1 nsv825387 1 167493568 167508098 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1430380,nssv1436366,nssv1433455,nssv1437253,nssv1437918,nssv1440846,nssv1427292,nssv1440159,nssv1423786,nssv1429593,nssv1438613,nssv1422399,nssv1434895 M 31 13 0 NME7 AK14,AK16,AK8,NA18526,NA18542,NA18547,NA18552,NA18564,NA18942,NA18949,NA18968,NA18969,NA18973 nsv825398 1 167493568 167520752 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423161,nssv1434407 M 31 2 0 NME7 NA18592,NA18999 esv32640 1 167493797 167507911 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101049,essv96000,essv94861,essv101129,essv94482,essv95390,essv97041,essv99505,essv100551,essv94161,essv96792,essv98618,essv96593,essv94069,essv93277,essv95107,essv94327,essv96347,essv93901,essv92687,essv100688,essv92535,essv97793,essv97081,essv100330,essv99976,essv96508 M 51 19 8 NME7 21618,21634,21656,21659,21693,21721,21802,21808,21817,21837,21872,21932,21944,22011,22075,22085,22086,22127,22170,22231,22233,22261,22298,22300,22335,22371,22394 nsv514015 1 167495760 167507888 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2851559,nssv2850696,nssv2851468,nssv2851600,nssv2851478,nssv2850704,nssv2851560,nssv2851594,nssv2851583,nssv2851579,nssv2851571,nssv2851601,nssv2851544,nssv2851588,nssv2850690,nssv2851447,nssv2850686,nssv2851506,nssv2850685,nssv2851455,nssv2851453,nssv2851585,nssv2851465,nssv2851547,nssv2851483,nssv2851460,nssv2851531,nssv2851530,nssv2851498,nssv2851516,nssv2851535,nssv2851481,nssv2851602,nssv2850689,nssv2851459,nssv2851532,nssv2851537,nssv2850697,nssv2851577,nssv2851476,nssv2851509,nssv2851569,nssv2851542,nssv2851556,nssv2851607,nssv2851475,nssv2851603,nssv2851597,nssv2851525,nssv2851448,nssv2851563,nssv2851513,nssv2851479,nssv2851470,nssv2851538,nssv2851598,nssv2851590,nssv2851473,nssv2850694,nssv2851573,nssv2851551,nssv2850705,nssv2850703,nssv2851510,nssv2851599,nssv2851519,nssv2851549,nssv2851469,nssv2850698,nssv2851511,nssv2851589,nssv2851595,nssv2851502,nssv2851578,nssv2851562,nssv2851565,nssv2851497,nssv2851587,nssv2850706,nssv2851454,nssv2851546,nssv2851503,nssv2851493,nssv2851605,nssv2850701,nssv2851466,nssv2851552,nssv2851500,nssv2851548,nssv2851582,nssv2851606,nssv2851505,nssv2851541,nssv2851533,nssv2851580,nssv2851512,nssv2851490,nssv2851499,nssv2851486,nssv2851450,nssv2851467,nssv2851566,nssv2851570,nssv2851482,nssv2851555,nssv2851526,nssv2850683,nssv2851504,nssv2851529,nssv2851554,nssv2851586,nssv2851591,nssv2851477,nssv2850699,nssv2851458,nssv2851568,nssv2851492,nssv2851536,nssv2851480,nssv2851489,nssv2851612,nssv2851495,nssv2851462,nssv2851550,nssv2850684,nssv2850693,nssv2851515,nssv2851592,nssv2851520,nssv2851564,nssv2851452,nssv2851488,nssv2851539,nssv2850688,nssv2850708,nssv2851501,nssv2851604,nssv2850702,nssv2850687,nssv2851451,nssv2851523,nssv2851553,nssv2851593,nssv2851491,nssv2851484,nssv2851521,nssv2851575,nssv2851576,nssv2851474,nssv2851527,nssv2851558,nssv2851584,nssv2851561,nssv2851485,nssv2851611,nssv2851534,nssv2851517,nssv2851528,nssv2851557,nssv2851518,nssv2851608,nssv2851507,nssv2851456,nssv2851545,nssv2851574,nssv2851487,nssv2851524,nssv2851496,nssv2851472,nssv2850691,nssv2851461,nssv2850707,nssv2851494,nssv2851508,nssv2851540,nssv2851610,nssv2851609,nssv2851514,nssv2850692,nssv2851543,nssv2851449,nssv2851471,nssv2850700,nssv2851581,nssv2851596,nssv2851464,nssv2850695,nssv2851522,nssv2851572,nssv2851463,nssv2851567,nssv2851457 M 2366 0 192 NME7 NA06984,NA06985,NA06986,NA06989,NA06991,NA07000,NA07014,NA07022,NA07048,NA07051,NA07055,NA07346,NA07347,NA07349,NA10830,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10850,NA10851,NA10855,NA10856,NA10857,NA10860,NA10864,NA11829,NA11830,NA11831,NA11832,NA11843,NA11881,NA11892,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11993,NA11994,NA11995,NA12004,NA12044,NA12045,NA12154,NA12234,NA12236,NA12239,NA12248,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12287,NA12329,NA12340,NA12343,NA12344,NA12347,NA12375,NA12376,NA12383,NA12414,NA12489,NA12546,NA12708,NA12716,NA12740,NA12751,NA12752,NA12760,NA12776,NA12777,NA12778,NA12813,NA12827,NA12828,NA12830,NA12832,NA12842,NA12843,NA12875,NA12877,NA12889,NA12890,NA12892,NA18497,NA18498,NA18523,NA18537,NA18555,NA18566,NA18570,NA18571,NA18576,NA18582,NA18593,NA18605,NA18632,NA18633,NA18635,NA18853,NA18854,NA18856,NA18862,NA18863,NA18868,NA18869,NA18870,NA18872,NA18909,NA18911,NA18940,NA18945,NA18947,NA18948,NA18966,NA18980,NA18997,NA18998,NA19003,NA19107,NA19109,NA19119,NA19137,NA19144,NA19145,NA19150,NA19151,NA19159,NA19172,NA19173,NA19185,NA19186,NA19224,NA19225,NA21302,NA21303,NA21307,NA21309,NA21310,NA21313,NA21316,NA21317,NA21344,NA21362,NA21363,NA21365,NA21381,NA21384,NA21386,NA21387,NA21388,NA21389,NA21391,NA21399,NA21403,NA21404,NA21438,NA21440,NA21441,NA21442,NA21454,NA21455,NA21478,NA21479,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21512,NA21513,NA21514,NA21526,NA21580,NA21583,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686 nsv548157 1 167495768 167505811 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728266,nssv728267 M 17421 2 0 NME7 dgv42n27 1 167495768 167506708 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv464517,nsv465128,nsv464683,nsv465350,nsv464872,nsv465417,nsv465594,nsv464472,nsv465250,nsv464272,nsv464461,nsv464827,nsv464705,nsv464905,nsv464439,nsv464650,nsv465483,nsv465617,nsv465062,nsv464539,nsv464350,nsv465095,nsv464750,nsv465027,nsv464506,nsv464395,nsv464961,nsv464805,nsv464428,nsv465117,nsv464339,nsv465005,nsv465583,nsv464816,nsv464328,nsv464306,nsv465605,nsv464728,nsv464983,nsv464916,nsv464883,nsv464605,nsv465261,nsv465539,nsv465550,nsv465406,nsv465494,nsv465517,nsv465217,nsv465150,nsv464772,nsv464383,nsv465306,nsv464561,nsv464761,nsv465339,nsv464716,nsv465049,nsv464317,nsv465461,nsv464284,nsv464550,nsv464694,nsv464994,nsv464739,nsv465561,nsv465239,nsv465161,nsv464672,nsv464783,nsv464927,nsv465272,nsv465439,nsv464950,nsv465383,nsv465428,nsv464528,nsv465572,nsv465317,nsv464617,nsv465106,nsv464372,nsv465372,nsv465195,nsv464494,nsv464628,nsv464850,nsv465228,nsv465139,nsv464938,nsv465206,nsv465361,nsv465472,nsv465038,nsv464572,nsv464483,nsv465295,nsv465184,nsv464583,nsv464361,nsv465016,nsv465328,nsv464894,nsv465395,nsv464594,nsv464639,nsv464417,nsv465450,nsv464972,nsv464839,nsv464295,nsv465173,nsv465073,nsv464794,nsv465084,nsv464261,nsv465284,nsv465528,nsv464661,nsv464406,nsv464450,nsv465506,nsv464861 M 1557 0 123 NME7 1780846004_A,1780854130_A,1780854293_A,1780854295_A,1780854326_A,1780854328_A,1780854401_A,1780854437_A,1780854467_A,1780854487_A,1780854496_A,1780854537_A,1780854556_A,1780854573_A,1780862123_A,1780862165_A,1780862225_A,1780862301_A,1780862347_A,1780862366_A,1780862372_A,1780862386_A,1780862388_A,1780862390_A,1780862452_A,1780862480_A,1780862516_A,1780862532_A,1780862575_A,1780862584_A,1782681109_A,1782681117_A,1782681210_A,1782681275_A,1782681329_A,1787431197_A,1788485589_A,1798860186_A,1798860292_A,1798860336_A,1798860491_A,1798860570_A,HGDP00064,HGDP00074,HGDP00234,HGDP00281,HGDP00304,HGDP00313,HGDP00514,HGDP00518,HGDP00521,HGDP00524,HGDP00534,HGDP00561,HGDP00578,HGDP00591,HGDP00612,HGDP00618,HGDP00662,HGDP00663,HGDP00669,HGDP00670,HGDP00686,HGDP00714,HGDP00729,HGDP00731,HGDP00746,HGDP00769,HGDP00777,HGDP00779,HGDP00786,HGDP00808,HGDP00891,HGDP01063,HGDP01064,HGDP01069,HGDP01077,HGDP01166,HGDP01171,HGDP01256,HGDP01257,HGDP01360,HGDP01362,HGDP01369,HGDP01372,HGDP01378,HGDP01383,HGDP01386,NINDS_105,NINDS_109,NINDS_112,NINDS_117,NINDS_123,NINDS_127,NINDS_13,NINDS_149,NINDS_158,NINDS_159,NINDS_16,NINDS_190,NINDS_194,NINDS_199,NINDS_206,NINDS_208,NINDS_209,NINDS_213,NINDS_215,NINDS_218,NINDS_222,NINDS_227,NINDS_236,NINDS_258,NINDS_29,NINDS_33,NINDS_37,NINDS_43,NINDS_45,NINDS_57,NINDS_60,NINDS_64,NINDS_71,NINDS_91,NINDS_95 nsv515530 1 167495768 167506708 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv659652,nssv688389,nssv677803,nssv687712,nssv667019,nssv668397,nssv679607,nssv668119,nssv677293,nssv678548,nssv666245,nssv673629,nssv672694,nssv658989,nssv652787,nssv690695,nssv655494,nssv691709,nssv663101,nssv684588,nssv676836,nssv687066,nssv688541,nssv689644,nssv654600,nssv652232,nssv656506,nssv665681,nssv653613,nssv670336,nssv671537,nssv676137,nssv660749,nssv651689,nssv691816,nssv658782,nssv684963,nssv690993,nssv663346,nssv690231,nssv670901,nssv674451,nssv661647,nssv688807,nssv685138,nssv686412,nssv651820,nssv687746,nssv685015,nssv693539,nssv661555,nssv686970,nssv663534,nssv691053,nssv687120,nssv677710,nssv657856,nssv672942,nssv678312,nssv666090,nssv655164,nssv653743,nssv657178,nssv680547,nssv693003,nssv666730,nssv662672,nssv672222,nssv665511,nssv670358,nssv677316,nssv681591,nssv660983,nssv652611,nssv683733,nssv685595,nssv682635,nssv676440,nssv668769,nssv693674,nssv652501,nssv656110,nssv655254,nssv691615,nssv676802,nssv671164,nssv669005,nssv691958,nssv664602,nssv652211,nssv652417,nssv689882,nssv683254,nssv674729,nssv682621,nssv668751,nssv684497,nssv661395,nssv663367,nssv664212,nssv663826,nssv655835,nssv663142,nssv666960,nssv687239,nssv652702,nssv668434,nssv670194,nssv661117,nssv664801,nssv673234,nssv667193,nssv675880,nssv675864,nssv680871,nssv653421,nssv687859,nssv683098,nssv660950,nssv672435,nssv655822,nssv684189,nssv673120,nssv686286,nssv669575,nssv689120,nssv685021,nssv662726,nssv663917,nssv672841,nssv657649,nssv675399,nssv655850,nssv692185,nssv684663,nssv684061,nssv693179,nssv679182,nssv673106,nssv677209,nssv664097,nssv659122,nssv679369,nssv659238,nssv683770,nssv687737,nssv682310,nssv654839,nssv659863,nssv675687,nssv683529,nssv691790,nssv674737,nssv658086,nssv662743,nssv678630,nssv652003,nssv686126,nssv689716,nssv656157,nssv685612,nssv693250,nssv677419,nssv678580,nssv653713,nssv663036,nssv689446,nssv689998,nssv659046,nssv685975,nssv682251,nssv652390,nssv667541,nssv669525,nssv653915,nssv693592,nssv651666,nssv660726,nssv653106,nssv689086,nssv667672,nssv688735,nssv665075,nssv663636,nssv678769,nssv658162,nssv668342,nssv692463,nssv660860,nssv657016,nssv687658,nssv669058,nssv678344,nssv682162,nssv684813,nssv660505,nssv671886,nssv676368,nssv657228,nssv666711,nssv702513,nssv668799,nssv671823,nssv652738,nssv654514,nssv680831,nssv689837,nssv655704,nssv677976,nssv657678,nssv660237,nssv664496,nssv668238,nssv688949,nssv666310,nssv675012,nssv652058,nssv665284,nssv656992,nssv684989,nssv652882,nssv664518,nssv682833,nssv675485,nssv682013,nssv666581,nssv657522,nssv660448,nssv674267,nssv683457,nssv681184,nssv671073,nssv688599,nssv685413,nssv667834,nssv687356,nssv675853,nssv676334,nssv679936,nssv684517,nssv666687,nssv684538,nssv652975,nssv666985,nssv676889,nssv680224 M 2026 3 243 NME7 nsv818567 1 167495768 167506708 CNV gain+loss Wang_et_al_2007 17921354 SNP array nssv1416505,nssv1418530,nssv1418214,nssv1417817,nssv1417409,nssv1416218,nssv1415738,nssv1416526,nssv1418103,nssv1417222,nssv1418341,nssv1415736,nssv1417139,nssv1417150,nssv1416999,nssv1418529,nssv1416121,nssv1417000,nssv1418342,nssv1416516,nssv1415934,nssv1416219,nssv1416027,nssv1415935,nssv1418042,nssv1416528,nssv1417128,nssv1415737,nssv1418531,nssv1416122,nssv1416525,nssv1416026,nssv1417818 M 112 6 27 NME7 NA06985,NA06991,NA07000,NA07029,NA10830,NA10851,NA10857,NA10863,NA11881,NA12044,NA12057,NA12146,NA12154,NA12234,NA12236,NA12239,NA12264,NA12740,NA12751,NA12812,NA12813,NA12865,NA12874,NA12875,NA12891,NA12892,NA18576,NA18853,NA18854,NA18951,NA19171,NA19172,NA19173 dgv625n54 1 167495768 167507362 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548158,nsv548156,nsv548160 M 17421 0 539 NME7 1780846004_A,1780854130_A,1780854293_A,1780854295_A,1780854299_A,1780854326_A,1780854328_A,1780854401_A,1780854437_A,1780854467_A,1780854487_A,1780854496_A,1780854537_A,1780854556_A,1780854573_A,1780862123_A,1780862165_A,1780862225_A,1780862301_A,1780862347_A,1780862366_A,1780862372_A,1780862386_A,1780862388_A,1780862390_A,1780862452_A,1780862480_A,1780862516_A,1780862532_A,1780862575_A,1780862584_A,1782681109_A,1782681117_A,1782681210_A,1782681262_A,1782681275_A,1782681329_A,1787431197_A,1788485589_A,1798860292_A,1798860336_A,1798860491_A,1798860570_A,HGDP00064,HGDP00074,HGDP00234,HGDP00281,HGDP00292,HGDP00304,HGDP00313,HGDP00514,HGDP00518,HGDP00521,HGDP00524,HGDP00534,HGDP00561,HGDP00578,HGDP00591,HGDP00612,HGDP00618,HGDP00662,HGDP00663,HGDP00669,HGDP00670,HGDP00686,HGDP00714,HGDP00729,HGDP00731,HGDP00746,HGDP00769,HGDP00777,HGDP00779,HGDP00786,HGDP00808,HGDP00891,HGDP01063,HGDP01064,HGDP01069,HGDP01077,HGDP01166,HGDP01171,HGDP01256,HGDP01257,HGDP01360,HGDP01362,HGDP01369,HGDP01372,HGDP01378,HGDP01383,HGDP01386,NINDS_105,NINDS_109,NINDS_112,NINDS_117,NINDS_123,NINDS_127,NINDS_13,NINDS_149,NINDS_158,NINDS_159,NINDS_16,NINDS_190,NINDS_194,NINDS_199,NINDS_206,NINDS_208,NINDS_209,NINDS_213,NINDS_215,NINDS_218,NINDS_222,NINDS_227,NINDS_236,NINDS_258,NINDS_29,NINDS_33,NINDS_37,NINDS_43,NINDS_45,NINDS_57,NINDS_60,NINDS_64,NINDS_71,NINDS_91,NINDS_95 dgv626n54 1 167495768 167507599 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548165,nsv548159,nsv548161 M 17421 5 306 NME7 dgv627n54 1 167495768 167523125 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548163,nsv548176,nsv548162 M 17421 3 0 NME7 nsv548164 1 167498166 167505811 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728690 M 17421 0 1 NME7 dgv628n54 1 167498837 167507599 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548167,nsv548166,nsv548172,nsv548171,nsv548173,nsv548168,nsv548170,nsv548169,nsv548175,nsv548174,nsv548177,nsv548178 M 17421 38 0 NME7 nsv1004674 1 167500586 167538416 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500938,nssv3489989 M 29084 2 0 NME7 nsv442352 1 167500598 167508390 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619063,nssv1618986,nssv1618988,nssv1619061,nssv1619021,nssv1619022,nssv1618993,nssv1619006,nssv1619019,nssv1619038,nssv1619009,nssv1619026,nssv1618991,nssv1618995,nssv1619036,nssv1619012,nssv1619025,nssv1619054,nssv1619023,nssv1619034,nssv1619059,nssv1619010,nssv1619049,nssv1619051,nssv1618989,nssv1618999,nssv1619008,nssv1618987,nssv1619040,nssv1619002,nssv1619017,nssv1619005,nssv1619013,nssv1619043,nssv1619007,nssv1619064,nssv1619027,nssv1618990,nssv1619020,nssv1619001,nssv1619037,nssv1619042,nssv1618984,nssv1619057,nssv1619058,nssv1619060,nssv1619000,nssv1619050,nssv1619032,nssv1619004,nssv1619003,nssv1619053,nssv1619016,nssv1619029,nssv1619055,nssv1619044,nssv1618985,nssv1619014,nssv1619035,nssv1619018,nssv1619062,nssv1619056,nssv1619030,nssv1618994,nssv1619028,nssv1618996,nssv1619033,nssv1619045,nssv1619052,nssv1619031,nssv1619046,nssv1618983,nssv1618998,nssv1618997,nssv1619047,nssv1619024,nssv1619041,nssv1619015,nssv1618992,nssv1619048,nssv1619039,nssv1619011 M 270 0 82 NME7 NA06985,NA06991,NA07000,NA07022,NA07029,NA07048,NA07055,NA10830,NA10838,NA10839,NA10851,NA10855,NA10856,NA10857,NA10860,NA10861,NA11829,NA11830,NA11831,NA11832,NA11881,NA11993,NA11994,NA11995,NA12003,NA12004,NA12006,NA12044,NA12057,NA12154,NA12234,NA12236,NA12239,NA12248,NA12264,NA12707,NA12716,NA12740,NA12751,NA12752,NA12760,NA12813,NA12865,NA12875,NA12892,NA18523,NA18537,NA18555,NA18566,NA18570,NA18571,NA18576,NA18582,NA18593,NA18605,NA18632,NA18633,NA18635,NA18853,NA18854,NA18856,NA18862,NA18863,NA18870,NA18872,NA18940,NA18945,NA18947,NA18948,NA18951,NA18966,NA18980,NA18997,NA18998,NA19003,NA19119,NA19137,NA19144,NA19145,NA19159,NA19172,NA19173 esv2764197 1 167500598 167509025 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006646,essv7006660,essv7006655,essv7006659,essv7006651,essv7006644,essv7006657,essv7006636,essv7006647,essv7006653,essv7006642,essv7006641,essv7006637,essv7006658,essv7006638,essv7006648,essv7006654,essv7006650,essv7006652,essv7006635,essv7006649,essv7006640,essv7006643,essv7006639 M 1109 0 24 NME7 RW_0005,RW_0074,RW_0124,RW_0137,RW_0202,RW_0209,RW_0221,RW_0226,RW_0234,RW_0237,RW_0248,RW_0249,RW_0258,RW_0271,RW_0333,RW_0521,RW_0548,RW_0567,RW_0587,RW_0608,RW_0611,RW_0617,RW_0652,RW_0655 esv2761410 1 167500598 167522026 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7002289,essv7002622,essv7002256,essv7002334,essv7002212,essv7002267,essv7002412,essv7002190,essv7002145,essv7002056,essv7002090,essv7002101,essv7002367,essv7002112,essv7002634,essv7002523,essv7001945,essv7001879,essv7002511,essv7002700,essv7001843,essv7002389,essv7002545,essv7001923,essv7002645,essv7002356,essv7002023,essv7002001,essv7001934,essv7002301,essv7001956,essv7002656,essv7002600,essv7002667,essv7002201,essv7002012,essv7002556,essv7002400,essv7002434,essv7002678,essv7002045,essv7002123,essv7002345,essv7002234,essv7002456,essv7001766,essv7001868,essv7001832,essv7002378,essv7002156,essv7001857,essv7002689,essv7002500,essv7002312,essv7002567,essv7002134,essv7002445,essv7002067,essv7001968,essv7002178,essv7002079,essv7001912,essv7001901,essv7002223,essv7002423,essv7002278,essv7002578,essv7001777,essv7001810,essv7001788,essv7002034,essv7002534,essv7001979,essv7002589,essv7002611,essv7002245,essv7002711,essv7001744,essv7002478,essv7001890,essv7001755,essv7001799,essv7001821,essv7002467,essv7002489,essv7002323,essv7002167,essv7001990 M 1109 0 88 NME7 SW_0003,SW_0029,SW_0045,SW_0049,SW_0076,SW_0099,SW_0115,SW_0145,SW_0149,SW_0159,SW_0189,SW_0199,SW_0203,SW_0216,SW_0242,SW_0255,SW_0312,SW_0323,SW_0351,SW_0352,SW_0354,SW_0368,SW_0369,SW_0507,SW_0535,SW_0625,SW_0628,SW_0631,SW_0641,SW_0647,SW_0661,SW_0678,SW_0758,SW_0760,SW_0775,SW_0817,SW_0829,SW_0841,SW_0844,SW_0857,SW_0885,SW_0889,SW_0890,SW_1003,SW_1006,SW_1017,SW_1020,SW_1029,SW_1038,SW_1077,SW_1081,SW_1086,SW_1093,SW_1116,SW_1131,SW_1138,SW_1141,SW_1147,SW_1153,SW_1156,SW_1163,SW_1171,SW_1179,SW_1197,SW_1199,SW_1215,SW_1227,SW_1240,SW_1243,SW_1266,SW_1270,SW_1272,SW_1275,SW_1294,SW_1299,SW_1314,SW_1333,SW_1364,SW_1395,SW_1412,SW_1423,SW_1428,SW_1470,SW_1476,SW_1484,SW_1503,SW_1511,SW_1571 dgv629n54 1 167501486 167507599 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548182,nsv548181,nsv548180,nsv548179 M 17421 0 35 NME7 nsv548183 1 167502563 167507599 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728774,nssv728773,nssv728772,nssv728771,nssv728776,nssv728777,nssv728775 M 17421 1 6 NME7 dgv630n54 1 167504214 167507599 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548185,nsv548184 M 17421 0 35 NME7 nsv548186 1 167504716 167520095 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728813 M 17421 0 1 NME7 esv3890760 1 167524930 167623902 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779933 M 3017 0 1 BLZF1,NME7 esv1514014 1 167578517 167578701 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4157142 M 2 0 1 NME7 HuRef esv33347 1 167584400 167584671 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95151,essv94552,essv93884 M 51 0 3 NME7 21634,21721,21932 nsv831871 1 167587297 167753304 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451239 M 95 0 1 BLZF1,CCDC181,F5,NME7,SLC19A2 esv1749280 1 167590828 167590913 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4050600 M 2 0 1 NME7 HuRef esv1584020 1 167591117 167591117 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4342456 M 2 1 0 NME7 HuRef nsv159064 1 167591118 167591118 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177642 M 24 NME7 esv3325022 1 167605617 167605631 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901744,essv8901746,essv8901745,essv8901749,essv8901748,essv8901750 M 185 6 0 BLZF1 NA18499,NA18502,NA18510,NA18522,NA19147,NA19190 esv3374671 1 167605623 167605633 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673793,essv8673795,essv8673794 M 185 3 0 BLZF1 NA19238,NA19239,NA19240 nsv1001454 1 167654005 167731898 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704815 M 29084 1 0 CCDC181,SLC19A2 nsv1005941 1 167677110 167723017 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501920 M 29084 0 1 SLC19A2 esv3425146 1 167709577 167709596 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596681 M 185 1 0 SLC19A2 NA18969 esv3303796 1 167709579 167709580 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7763591,essv7765871 M 185 2 0 SLC19A2 NA18969,NA19143 esv1979081 1 167738461 167738830 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4513248 M 1 0 1 "" NA18507 esv1533539 1 167738642 167738743 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4207861 M 2 0 1 "" HuRef esv2518089 1 167790961 167791916 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5284643 M 1 1 0 F5 NA18507 esv3308424 1 167791483 167791484 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837897,essv7838970,essv7837280 M 185 3 0 F5 NA12892,NA19238,NA19240 esv3306273 1 167791490 167791491 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7784875,essv7771842,essv7793509,essv7801661,essv7775870,essv7777456,essv7798075,essv7813189,essv7829526,essv7809440,essv7773006,essv7799083,essv7801246,essv7790520,essv7786889,essv7793949,essv7784307,essv7827382,essv7815579,essv7821759,essv7807854,essv7831412,essv7817107,essv7810427,essv7792523,essv7799850,essv7835575,essv7781212,essv7788007,essv7775196,essv7789539,essv7798868,essv7778526,essv7805486,essv7774973,essv7786232,essv7780480,essv7818107,essv7770429,essv7832603,essv7806236,essv7797284,essv7822513,essv7777061,essv7792038,essv7783248,essv7812709,essv7791506,essv7804503,essv7792421,essv7807049,essv7795358,essv7794612,essv7810925,essv7793166,essv7779129,essv7771589,essv7816279,essv7824304,essv7812794,essv7806838,essv7796439,essv7816826,essv7810122,essv7823795,essv7835982,essv7827011,essv7785868,essv7807450,essv7778116,essv7819500,essv7825084,essv7814252,essv7828191,essv7794870,essv7830463,essv7826068,essv7805813,essv7782916,essv7779363,essv7826534,essv7832069,essv7820977,essv7773228,essv7803471,essv7822974,essv7796262,essv7786638,essv7816500,essv7804183,essv7802174 M 185 91 0 F5 NA07000,NA07346,NA07347,NA10851,NA11829,NA11831,NA11894,NA11918,NA12003,NA12044,NA12414,NA12489,NA12717,NA12761,NA18489,NA18498,NA18499,NA18502,NA18504,NA18505,NA18508,NA18511,NA18516,NA18517,NA18519,NA18520,NA18522,NA18523,NA18537,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18853,NA18856,NA18858,NA18870,NA18907,NA18909,NA18912,NA18916,NA18940,NA18943,NA18944,NA18945,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18980,NA19093,NA19102,NA19108,NA19114,NA19116,NA19129,NA19137,NA19138,NA19147,NA19172,NA19210,NA19225,NA19238,NA19239,NA19240,NA19257 esv3425707 1 167791490 167791509 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596692 M 185 1 0 F5 NA11918 nsv548187 1 167797461 167825659 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728814 M 17421 0 1 F5,SELP esv2762197 1 167835270 167838969 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006661 M 1109 0 1 SELP RW_0020 nsv517483 1 167843192 167847882 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv693364,nssv659831,nssv664245,nssv687920,nssv682474,nssv652156 M 2026 0 6 SELP nsv472783 1 167850011 167850011 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013844 M 9 1 0 SELP NA18555 esv2516985 1 167856983 167857290 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5368119 M 1 0 1 SELP NA18507 nsv159209 1 167874342 167880013 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177787 M 24 "" nsv819234 1 167926518 167926725 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419170 M 2 1 0 SELL AK1 nsv1009313 1 167927923 167946797 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704816 M 29084 0 1 SELL esv2758976 1 168048630 168151810 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757760 M 270 2 114 C1orf112,SCYL3 NA06994,NA07019,NA07029,NA07034,NA07048,NA07056,NA07348,NA07357,NA10831,NA10854,NA10855,NA11830,NA11832,NA11840,NA12004,NA12057,NA12264,NA12707,NA12801,NA12812,NA12874,NA12875,NA18500,NA18501,NA18502,NA18505,NA18506,NA18507,NA18508,NA18516,NA18522,NA18524,NA18529,NA18532,NA18540,NA18545,NA18547,NA18555,NA18561,NA18562,NA18563,NA18566,NA18573,NA18576,NA18603,NA18608,NA18611,NA18620,NA18621,NA18622,NA18623,NA18624,NA18637,NA18852,NA18854,NA18856,NA18861,NA18862,NA18913,NA18914,NA18940,NA18944,NA18945,NA18948,NA18949,NA18952,NA18953,NA18967,NA18968,NA18971,NA18973,NA18975,NA18976,NA18978,NA18981,NA18987,NA18990,NA18991,NA18995,NA18997,NA18999,NA19003,NA19007,NA19093,NA19094,NA19099,NA19100,NA19102,NA19116,NA19119,NA19128,NA19129,NA19130,NA19140,NA19152,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19192,NA19193,NA19194,NA19200,NA19202,NA19204,NA19207,NA19209,NA19210,NA19211,NA19221,NA19222,NA19223,NA19239 nsv428268 1 168048630 168151810 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv452476,nssv452531,nssv452409,nssv452354,nssv452487,nssv452365,nssv452465,nssv452341,nssv452509,nssv452376,nssv452398,nssv452387,nssv452431,nssv452520,nssv452498,nssv452453,nssv452420,nssv452442 M 62 3 15 C1orf112,SCYL3 HGDP00449,HGDP00450,HGDP00462,HGDP00463,HGDP00471,HGDP00472,HGDP00476,HGDP00984,HGDP01086,HGDP01088,HGDP01089,HGDP01093,NA18498,NA19096,NA19113,NA19147,NA19181,NA19225 esv8223 1 168129715 168129912 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30664 M 1 0 0 SCYL3 nsv477255 1 168131167 168131167 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010950 M 9 1 0 "" NA18517 dgv460n100 1 168157166 168196206 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003803,nsv998382,nsv1015110,nsv1007190 M 29084 0 6 KIFAP3 dgv461n100 1 168158908 168216965 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012222,nsv1010007,nsv997360,nsv1009843,nsv1011978,nsv1003588 M 29084 0 7 KIFAP3 dgv462n100 1 168159285 168236068 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013271,nsv997289,nsv1004999,nsv1001670,nsv1012520 M 29084 0 8 KIFAP3 esv2430109 1 168164280 168165634 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5315942 M 1 0 1 KIFAP3 NA18507 dgv463n100 1 168180221 168213060 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010446,nsv1006673 M 29084 0 4 KIFAP3 dgv464n100 1 168180221 168231730 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005982,nsv1008890,nsv1009789,nsv1001013,nsv1012534 M 29084 0 8 KIFAP3 nsv1010370 1 168184074 168247575 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493213 M 29084 0 1 KIFAP3 nsv433500 1 168237446 168245725 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463381 M 9 0 1 KIFAP3 NA18956 esv3378787 1 168241729 168241748 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596703 M 185 1 0 KIFAP3 NA12874 esv3307480 1 168241738 168241739 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7764296 M 185 1 0 KIFAP3 NA12874 nsv474850 1 168270894 168270894 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011728 M 9 1 0 KIFAP3 NA18956 nsv999310 1 168332567 168489974 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500071 M 29084 0 1 METTL11B,MIR3119-1,MIR3119-2 esv3395629 1 168368686 168368686 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823214 M 185 1 0 "" NA12878 esv990262 1 168368723 168368723 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566508 M 3 1 0 "" HuRef nsv160809 1 168368725 168368725 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179387 M 24 "" nsv3454 1 168401504 168416071 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7785 M 9 0 1 METTL11B NA12156 nsv527360 1 168489974 168494919 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703790 M 2026 0 1 "" esv2758977 1 168581705 168679916 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756870 M 270 0 4 "" NA18859,NA19098,NA19201,NA19202 nsv437269 1 168609913 168627796 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467150 M 60 0 1 "" NA10857 dgv465n100 1 168633095 168653955 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000840,nsv1004916,nsv1014576,nsv1000790,nsv1010414,nsv1002109,nsv1012584,nsv1000663 M 29084 0 32 "" nsv441720 1 168634270 168653829 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656809,nssv1656808,nssv1656806,nssv1656807 M 270 0 4 "" NA18859,NA19098,NA19201,NA19202 esv2764177 1 168634274 168653955 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006665,essv7006663,essv7006664,essv7006666,essv7006662 M 1109 0 5 "" RW_0077,RW_0229,RW_0271,RW_0606,RW_0614 nsv1000945 1 168634274 168668394 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485278 M 29084 0 1 "" nsv514018 1 168634288 168652768 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2853208,nssv2853211,nssv2853216,nssv2853214,nssv2853213,nssv2853215,nssv2853209,nssv2853212,nssv2853210 M 2366 0 9 "" NA18487,NA18859,NA19098,NA19150,NA19201,NA19202,NA19235,NA19248,NA19249 nsv517083 1 168638027 168647104 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv666937,nssv652418,nssv653760,nssv692344,nssv673960 M 2026 0 5 "" nsv3465 1 168661919 168688587 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7115 M 9 1 0 "" NA12156 nsv474102 1 168666097 168666097 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015259 M 9 1 0 "" NA18507 esv2534255 1 168737308 168738962 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5216252 M 1 0 1 "" NA18507 nsv3476 1 168769908 168803593 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4807 M 9 1 0 GORAB NA19129 nsv1004104 1 168829707 168878166 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484157,nssv3484645 M 29084 0 2 "" esv2467625 1 168869543 168870583 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5373091 M 1 1 0 "" NA18507 esv3329025 1 168879089 168879089 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8639215 M 185 0 0 "" esv2487683 1 168887475 168889056 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5263446 M 1 0 1 "" NA18507 esv27783 1 168891688 168908014 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17612 M 40 1 0 PRRX1 NA12156 esv3439414 1 168918049 168918145 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673800,essv8673801 M 185 2 0 PRRX1 NA19238,NA19240 esv3354541 1 168918068 168918096 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901865,essv8901864,essv8901855,essv8901868,essv8901851,essv8901862,essv8901856,essv8901852,essv8901872,essv8901867,essv8901854,essv8901849,essv8901863,essv8901857,essv8901853,essv8901860,essv8901866,essv8901859,essv8901871,essv8901873,essv8901850,essv8901870,essv8901861 M 185 23 0 PRRX1 NA07000,NA11830,NA11881,NA11894,NA11918,NA12006,NA12044,NA12045,NA12144,NA12154,NA12156,NA12749,NA12751,NA12776,NA12828,NA18508,NA18532,NA18558,NA18912,NA18940,NA18945,NA19093,NA19129 esv3305066 1 168918072 168918073 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759302,essv7761213,essv7748184,essv7745727,essv7753768,essv7761555,essv7740724,essv7758955,essv7756792,essv7756463,essv7757944,essv7749743,essv7757559,essv7745881,essv7754318,essv7748364,essv7749120,essv7755750,essv7751760,essv7751367,essv7757173,essv7744387,essv7750036,essv7743429,essv7747490 M 185 25 0 PRRX1 NA07000,NA11830,NA11881,NA11894,NA11918,NA12006,NA12044,NA12045,NA12144,NA12154,NA12156,NA12749,NA12751,NA12776,NA12828,NA18508,NA18532,NA18558,NA18912,NA18940,NA18945,NA19093,NA19129,NA19238,NA19240 nsv473548 1 169065229 169065229 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015443 M 9 1 0 "" NA19129 esv3364486 1 169148904 169149121 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652054 M 185 1 0 "" NA19240 esv3429453 1 169148954 169149042 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670845,essv8670847,essv8670846 M 185 3 0 "" NA19238,NA19239,NA19240 esv3406241 1 169230658 169230694 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673802,essv8673803 M 185 2 0 MROH9 NA12878,NA12891 esv3310137 1 169230667 169230668 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840565,essv7840411 M 185 2 0 MROH9 NA12878,NA12891 esv3307086 1 169230669 169230670 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768027,essv7767772,essv7766340,essv7766016,essv7765712 M 185 5 0 MROH9 NA11918,NA12815,NA12873,NA12878,NA12891 nsv3487 1 169234862 169239597 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7801 M 9 1 0 MROH9 NA12156 esv28731 1 169282710 169993584 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10193,esv12447,esv14617,esv13592 M 40 3 1 FMO1,FMO2,FMO3,FMO4,FMO6P,MIR1295A,MIR1295B,MIR6801,MROH9,MYOC,PRRC2C,TOP1P1,VAMP4 NA07045,NA12156,NA18916,NA19114 nsv476432 1 169409166 169409166 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018894 M 9 1 0 "" NA12878 nsv831882 1 169432848 169592707 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451250 M 95 0 1 FMO1,FMO2,FMO4,TOP1P1 esv2090208 1 169446428 169446777 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4619517 M 1 0 1 FMO2 NA18507 esv1702263 1 169446542 169446624 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3876319 M 2 0 1 FMO2 HuRef esv3302661 1 169447316 169447525 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731623,essv7730971 M 185 2 0 FMO2 NA19238,NA19240 esv3383592 1 169447327 169447534 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670848,essv8670849 M 185 2 0 FMO2 NA19238,NA19240 nsv946500 1 169505528 169510547 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1803734,nssv1803766,nssv1803744,nssv1803754,nssv1803755,nssv1803799,nssv1803747,nssv1803787,nssv1803748,nssv1803774,nssv1803741,nssv1804438,nssv1803762,nssv1803781,nssv1804425,nssv1803763,nssv1803732,nssv1804437,nssv1803736,nssv1803783,nssv1803737,nssv1803770,nssv1803760,nssv1804440,nssv1804431,nssv1803796,nssv1804426,nssv1803789,nssv1804430,nssv1804418,nssv1803738,nssv1803775,nssv1803743,nssv1803779,nssv1804432,nssv1804422,nssv1803750,nssv1804421,nssv1804428,nssv1803788,nssv1803733,nssv1803771,nssv1804424,nssv1803764,nssv1803745,nssv1803731,nssv1803739,nssv1803782,nssv1803749,nssv1804419,nssv1803759,nssv1804416,nssv1803742,nssv1803773,nssv1803740,nssv1803769,nssv1803735,nssv1803794,nssv1803756,nssv1803778,nssv1804427,nssv1804441,nssv1803753,nssv1803772,nssv1803752,nssv1803793,nssv1803746,nssv1803777,nssv1804429,nssv1803768,nssv1803751,nssv1803785,nssv1804433,nssv1804420,nssv1803780,nssv1803790,nssv1803757,nssv1803797,nssv1804436,nssv1804417,nssv1803786,nssv1803776,nssv1804443,nssv1804439,nssv1803795,nssv1803761,nssv1803791,nssv1804435,nssv1803792,nssv1803798,nssv1803765,nssv1803767,nssv1803758,nssv1804434,nssv1804442,nssv1804423,nssv1803784 M 97 10 0 FMO1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv33004 1 169521768 169522090 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99360 M 51 1 0 "" 22275 nsv1002423 1 169561008 169643560 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501428 M 29084 0 1 FMO4,TOP1P1 nsv527149 1 169565564 169566972 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703539 M 2026 1 0 FMO4 nsv946501 1 169575206 169577435 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1804445,nssv1807339,nssv1807365,nssv1804478,nssv1804460,nssv1807335,nssv1804457,nssv1807332,nssv1804468,nssv1807352,nssv1807366,nssv1807348,nssv1807370,nssv1804488,nssv1804446,nssv1804482,nssv1804461,nssv1807357,nssv1804451,nssv1807341,nssv1804459,nssv1804483,nssv1807372,nssv1807376,nssv1804469,nssv1807358,nssv1807373,nssv1807337,nssv1804473,nssv1804479,nssv1804463,nssv1804484,nssv1807369,nssv1804486,nssv1804464,nssv1804477,nssv1804462,nssv1807334,nssv1804456,nssv1804470,nssv1804449,nssv1807333,nssv1807368,nssv1807344,nssv1804466,nssv1807360,nssv1807364,nssv1807336,nssv1804452,nssv1807361,nssv1804455,nssv1804485,nssv1804458,nssv1807359,nssv1807371,nssv1807363,nssv1804472,nssv1804474,nssv1804450,nssv1807356,nssv1804448,nssv1807379,nssv1804447,nssv1807380,nssv1804454,nssv1804481,nssv1804465,nssv1807346,nssv1804475,nssv1804471,nssv1804453,nssv1807355,nssv1807367,nssv1807383,nssv1807350,nssv1807349,nssv1807345,nssv1807342,nssv1807374,nssv1807353,nssv1804480,nssv1807375,nssv1807338,nssv1807347,nssv1807354,nssv1807381,nssv1804444,nssv1804487,nssv1807351,nssv1807377,nssv1807362,nssv1804467,nssv1807382,nssv1807343,nssv1807340,nssv1804476,nssv1807378 M 97 10 0 FMO4,TOP1P1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548188 1 169575456 169638622 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728815 M 17421 0 1 FMO4,TOP1P1 esv3366678 1 169624913 169624932 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596814 M 185 1 0 "" NA11881 nsv470745 1 169648370 169676138 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547785 M 443 0 1 "" HGDP00984 nsv465628 1 169648370 169676139 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541402 M 1557 0 1 "" HGDP00984 nsv548189 1 169648370 169676139 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173347 M 17421 0 1 "" HGDP00984 nsv524551 1 169674385 169677156 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700502 M 2026 0 1 "" nsv946503 1 169679924 169691201 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807390,nssv1807414,nssv1807395,nssv1807459,nssv1807388,nssv1807432,nssv1807463,nssv1807411,nssv1807387,nssv1807475,nssv1807467,nssv1807451,nssv1807469,nssv1807420,nssv1807391,nssv1807449,nssv1807401,nssv1807437,nssv1807389,nssv1807445,nssv1807399,nssv1807456,nssv1807404,nssv1807435,nssv1807462,nssv1807417,nssv1807398,nssv1807416,nssv1807406,nssv1807438,nssv1807413,nssv1807473,nssv1807466,nssv1807426,nssv1807470,nssv1807419,nssv1807396,nssv1807384,nssv1807408,nssv1807423,nssv1807386,nssv1807429,nssv1807403,nssv1807427,nssv1807385,nssv1807407,nssv1807397,nssv1807455,nssv1807394,nssv1807425,nssv1807400,nssv1807454,nssv1807461,nssv1807441,nssv1807465,nssv1807458,nssv1807402,nssv1807434,nssv1807393,nssv1807457,nssv1807415,nssv1807443,nssv1807392,nssv1807431,nssv1807412,nssv1807433,nssv1807468,nssv1807460,nssv1807409,nssv1807422,nssv1807405,nssv1807480,nssv1807464,nssv1807424,nssv1807453,nssv1807476,nssv1807450,nssv1807452,nssv1807447,nssv1807439,nssv1807446,nssv1807436,nssv1807472,nssv1807471,nssv1807430,nssv1807478,nssv1807428,nssv1807442,nssv1807448,nssv1807444,nssv1807421,nssv1807479,nssv1807477,nssv1807440,nssv1807418,nssv1807410,nssv1807474 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508045 1 169684074 169690074 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618513 M 4 0 0 "" CHM nsv508046 1 169703018 169709018 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622299 M 4 0 0 "" NA10860 esv2230348 1 169723591 169724023 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4693220 M 1 0 1 PRRC2C NA18507 nsv465639 1 169726131 169811675 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541409 M 1557 0 1 PRRC2C 1780862355_A nsv548190 1 169726131 169811675 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173348 M 17421 0 1 PRRC2C 1780862355_A nsv3498 1 169780508 169813955 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv305 M 9 1 0 PRRC2C NA19240 nsv999578 1 169844699 169877363 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704817 M 29084 0 1 MYOC nsv528322 1 169845155 169878890 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704903 M 2026 0 1 MYOC nsv548191 1 169845155 169878890 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728816 M 17421 0 1 MYOC nsv477946 1 169855754 169855754 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018480 M 9 1 0 "" NA18517 nsv946504 1 169919266 169920404 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807501,nssv1807533,nssv1807491,nssv1807545,nssv1807487,nssv1807532,nssv1807502,nssv1807507,nssv1807485,nssv1807548,nssv1807563,nssv1807572,nssv1807509,nssv1807556,nssv1807493,nssv1807571,nssv1807564,nssv1807534,nssv1807488,nssv1807542,nssv1807498,nssv1807539,nssv1807486,nssv1807541,nssv1807497,nssv1807546,nssv1807490,nssv1807525,nssv1807495,nssv1807513,nssv1807567,nssv1807574,nssv1807559,nssv1807514,nssv1807483,nssv1807517,nssv1807503,nssv1807524,nssv1807510,nssv1807520,nssv1807506,nssv1807523,nssv1807492,nssv1807552,nssv1807500,nssv1807508,nssv1807484,nssv1807516,nssv1807562,nssv1807570,nssv1807558,nssv1807511,nssv1807494,nssv1807535,nssv1807505,nssv1807554,nssv1807499,nssv1807481,nssv1807489,nssv1807555,nssv1807565,nssv1807504,nssv1807512,nssv1807529,nssv1807482,nssv1807553,nssv1807560,nssv1807537,nssv1807561,nssv1807538,nssv1807496,nssv1807526,nssv1807566,nssv1807531,nssv1807519,nssv1807540,nssv1807521,nssv1807557,nssv1807551,nssv1807522,nssv1807550,nssv1807528,nssv1807577,nssv1807573,nssv1807568,nssv1807547,nssv1807536,nssv1807544,nssv1807549,nssv1807530,nssv1807543,nssv1807569,nssv1807575,nssv1807527,nssv1807518,nssv1807576,nssv1807515 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3509 1 169957341 169991778 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv314 M 9 1 0 VAMP4 NA19240 nsv522889 1 170016288 170021694 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698547 M 2026 0 1 METTL13 nsv518222 1 170019662 170030172 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695646 M 2026 0 1 METTL13 esv5613 1 170029010 170029216 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28054 M 1 0 0 METTL13 nsv160770 1 170068305 170068305 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179348 M 24 "" nsv831893 1 170069073 170251623 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451261 M 95 0 1 DNM3 nsv3521 1 170107439 170141052 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2709 M 9 1 0 DNM3 NA18555 esv3332602 1 170172632 170172632 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8639223 M 185 0 0 DNM3 nsv477367 1 170203552 170203552 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017924 M 9 1 0 DNM3 NA18517 esv2615149 1 170252587 170254094 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5331961 M 1 0 1 DNM3 NA18507 esv275460 1 170262829 170267649 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586000 M 1250 0 1 DNM3 nsv3532 1 170264074 170308974 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7807 M 9 0 1 DNM3 NA12156 nsv1000079 1 170413558 170497168 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704818 M 29084 0 1 DNM3 nsv508047 1 170422888 170428888 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624223,nssv618514 M 4 0 0 DNM3 CHM,NA18994 nsv465650 1 170441738 170513750 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541416 M 1557 0 1 DNM3 NINDS_147 nsv548192 1 170441738 170513750 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173349 M 17421 0 1 DNM3 NINDS_147 nsv1006542 1 170520388 170571313 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488808 M 29084 0 1 DNM3 nsv3543 1 170590186 170601209 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7816 M 9 0 1 DNM3 NA12156 nsv947449 1 170686209 170691533 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2763412 M 97 1 0 C1orf105 HGDP00998 esv7885 1 170775129 170775942 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30326 M 1 0 0 SUCO nsv3554 1 170775883 170809554 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4815 M 9 1 0 SUCO NA19129 esv9065 1 170903364 170903550 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31506 M 1 0 0 "" esv3361731 1 170913832 170913847 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863775,essv7863774 M 185 2 0 "" NA11992,NA18522 esv1109436 1 170929918 170929918 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4315109 M 2 1 0 "" HuRef nsv825409 1 170945527 170946372 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434205 M 31 1 0 "" NA18570 esv2565396 1 170952066 170953450 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5236779 M 1 0 1 "" NA18507 nsv7185 1 170952312 170991363 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3511 M 9 0 0 "" NA12878 esv2127331 1 170952606 170953295 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4941988 M 1 0 1 "" NA18507 nsv946505 1 170956295 170959687 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807584,nssv1808270,nssv1807590,nssv1807634,nssv1808275,nssv1807638,nssv1807589,nssv1807605,nssv1807582,nssv1808256,nssv1807599,nssv1808264,nssv1807585,nssv1808257,nssv1807595,nssv1807604,nssv1807583,nssv1807639,nssv1808277,nssv1807631,nssv1807594,nssv1807636,nssv1807592,nssv1807620,nssv1807600,nssv1807611,nssv1807598,nssv1808265,nssv1808280,nssv1808263,nssv1808278,nssv1807578,nssv1807603,nssv1808258,nssv1808272,nssv1808289,nssv1807607,nssv1808288,nssv1807587,nssv1808267,nssv1808276,nssv1808283,nssv1807597,nssv1808287,nssv1808271,nssv1808261,nssv1808279,nssv1808285,nssv1808273,nssv1807614,nssv1807596,nssv1807610,nssv1807581,nssv1807629,nssv1807591,nssv1807608,nssv1807602,nssv1807617,nssv1807593,nssv1807630,nssv1807580,nssv1808290,nssv1807606,nssv1807613,nssv1807609,nssv1807622,nssv1807586,nssv1807612,nssv1808274,nssv1808284,nssv1807588,nssv1807624,nssv1807579,nssv1808281,nssv1808262,nssv1807621,nssv1807632,nssv1808282,nssv1807616,nssv1808286,nssv1807623,nssv1807628,nssv1807637,nssv1807618,nssv1807635,nssv1808259,nssv1807601,nssv1807619,nssv1807626,nssv1808268,nssv1807627,nssv1807615,nssv1808266,nssv1807633,nssv1808260,nssv1808269,nssv1807625 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3565 1 170966025 170977777 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4834 M 9 1 0 "" NA19129 nsv946506 1 170984679 170985928 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808297,nssv1808351,nssv1808299,nssv1808350,nssv1808322,nssv1808366,nssv1808312,nssv1808314,nssv1808296,nssv1808291,nssv1808374,nssv1808349,nssv1808308,nssv1808321,nssv1808301,nssv1808357,nssv1808313,nssv1808324,nssv1808372,nssv1808345,nssv1808293,nssv1808363,nssv1808316,nssv1808353,nssv1808319,nssv1808317,nssv1808320,nssv1808338,nssv1808298,nssv1808346,nssv1808302,nssv1808384,nssv1808311,nssv1808340,nssv1808303,nssv1808326,nssv1808370,nssv1808341,nssv1808309,nssv1808355,nssv1808376,nssv1808335,nssv1808304,nssv1808331,nssv1808371,nssv1808329,nssv1808377,nssv1808364,nssv1808369,nssv1808328,nssv1808307,nssv1808386,nssv1808292,nssv1808337,nssv1808315,nssv1808354,nssv1808373,nssv1808333,nssv1808310,nssv1808385,nssv1808375,nssv1808332,nssv1808306,nssv1808360,nssv1808305,nssv1808361,nssv1808368,nssv1808325,nssv1808300,nssv1808381,nssv1808295,nssv1808387,nssv1808294,nssv1808327,nssv1808334,nssv1808362,nssv1808367,nssv1808382,nssv1808348,nssv1808380,nssv1808339,nssv1808359,nssv1808330,nssv1808378,nssv1808352,nssv1808342,nssv1808347,nssv1808318,nssv1808358,nssv1808379,nssv1808383,nssv1808323,nssv1808344,nssv1808356,nssv1808343,nssv1808365,nssv1808336 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3576 1 171011321 171044764 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv323 M 9 1 0 "" NA19240 esv28695 1 171025949 171028597 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16936 M 40 0 1 "" NA18505 nsv947450 1 171052632 171055705 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764823 M 97 1 0 "" HGDP01029 nsv159827 1 171075068 171076391 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178405 M 24 "" esv2636908 1 171094357 171095823 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5258662 M 1 0 1 "" NA18507 nsv3587 1 171103573 171148841 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7825 M 9 0 1 "" NA12156 nsv473777 1 171103618 171103618 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011819 M 9 1 0 "" NA12156 esv3408759 1 171124209 171124228 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596825 M 185 1 0 "" NA19143 esv3305136 1 171124218 171124219 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7763825 M 185 1 0 "" NA19143 nsv831904 1 171178733 171337052 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1451283,nssv1451272 M 95 1 1 TNFSF18 esv9626 1 171257144 171257293 CNV gain Ahn_et_al_2009 19470904 Sequencing essv32067 M 1 0 0 "" esv21812 1 171350367 171351575 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11499 M 40 0 1 "" NA18916 nsv946507 1 171375754 171384934 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807645,nssv1808433,nssv1808396,nssv1808438,nssv1807646,nssv1808428,nssv1808393,nssv1808446,nssv1808405,nssv1808444,nssv1808416,nssv1807658,nssv1808395,nssv1808414,nssv1808410,nssv1807654,nssv1808401,nssv1807653,nssv1807648,nssv1808453,nssv1808390,nssv1808462,nssv1807649,nssv1808415,nssv1808397,nssv1808442,nssv1808394,nssv1808388,nssv1808408,nssv1808463,nssv1808419,nssv1808411,nssv1808406,nssv1808431,nssv1807644,nssv1808418,nssv1807640,nssv1808421,nssv1808413,nssv1808434,nssv1807641,nssv1808447,nssv1808409,nssv1808443,nssv1808400,nssv1808454,nssv1808404,nssv1808435,nssv1808389,nssv1808450,nssv1808407,nssv1808426,nssv1808412,nssv1807652,nssv1808391,nssv1808451,nssv1808417,nssv1808423,nssv1807643,nssv1808425,nssv1807647,nssv1808430,nssv1808398,nssv1808458,nssv1808402,nssv1808441,nssv1808392,nssv1808437,nssv1808399,nssv1808461,nssv1807642,nssv1808457,nssv1808403,nssv1808436,nssv1808452,nssv1808429,nssv1808422,nssv1808448,nssv1807656,nssv1808464,nssv1808432,nssv1808445,nssv1808459,nssv1808460,nssv1808456,nssv1808455,nssv1807655,nssv1808427,nssv1808439,nssv1807659,nssv1808420,nssv1807651,nssv1807650,nssv1807657,nssv1808424,nssv1808440,nssv1808449 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv479732 1 171488038 171488038 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017830 M 9 0 0 LOC100506023 nsv831915 1 171535047 171748780 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1451339,nssv1451461,nssv1451450,nssv1451328,nssv1451306,nssv1451361,nssv1451406,nssv1451417,nssv1451383,nssv1451317,nssv1451394,nssv1451350,nssv1451428,nssv1451372,nssv1451439,nssv1451295 M 95 5 11 LOC100506023,PRDX6,SLC9C2 nsv523009 1 171572255 171590919 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698682 M 2026 1 0 LOC100506023 nsv946508 1 171587283 171587966 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807672,nssv1807722,nssv1807681,nssv1807727,nssv1807669,nssv1807699,nssv1807664,nssv1807755,nssv1807666,nssv1807751,nssv1807745,nssv1807750,nssv1807667,nssv1807692,nssv1807661,nssv1807694,nssv1807743,nssv1807718,nssv1807675,nssv1807724,nssv1807663,nssv1807697,nssv1807677,nssv1807753,nssv1807665,nssv1807696,nssv1807691,nssv1807709,nssv1807676,nssv1807720,nssv1807679,nssv1807693,nssv1807688,nssv1807725,nssv1807674,nssv1807721,nssv1807742,nssv1807706,nssv1807680,nssv1807702,nssv1807746,nssv1807749,nssv1807670,nssv1807686,nssv1807685,nssv1807735,nssv1807740,nssv1807731,nssv1807682,nssv1807713,nssv1807662,nssv1807734,nssv1807738,nssv1807704,nssv1807678,nssv1807714,nssv1807741,nssv1807660,nssv1807737,nssv1807712,nssv1807689,nssv1807695,nssv1807671,nssv1807732,nssv1807673,nssv1807733,nssv1807739,nssv1807690,nssv1807744,nssv1807698,nssv1807684,nssv1807711,nssv1807668,nssv1807703,nssv1807707,nssv1807736,nssv1807719,nssv1807728,nssv1807705,nssv1807729,nssv1807710,nssv1807700,nssv1807687,nssv1807701,nssv1807717,nssv1807752,nssv1807756,nssv1807748,nssv1807730,nssv1807726,nssv1807683,nssv1807715,nssv1807716,nssv1807723,nssv1807754,nssv1807708,nssv1807747 M 97 10 0 LOC100506023 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1014827 1 171920076 171959093 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498133 M 29084 1 0 KLHL20 nsv3598 1 171959650 172005310 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7123 M 9 0 1 KLHL20 NA12156 nsv831926 1 171969026 172161290 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1451483,nssv1451472 M 95 1 1 CENPL,DARS2,GAS5,GAS5-AS1,KLHL20,SERPINC1,SNORD44,SNORD47,SNORD74,SNORD75,SNORD76,SNORD77,SNORD78,SNORD79,SNORD80,SNORD81,ZBTB37 nsv946509 1 171969941 171977729 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807788,nssv1807802,nssv1807763,nssv1807797,nssv1807841,nssv1807784,nssv1807761,nssv1807808,nssv1807840,nssv1807826,nssv1807835,nssv1807809,nssv1807769,nssv1807822,nssv1807834,nssv1807831,nssv1807762,nssv1807844,nssv1807774,nssv1807810,nssv1807778,nssv1807833,nssv1807764,nssv1807829,nssv1807773,nssv1807789,nssv1807839,nssv1807819,nssv1807760,nssv1807849,nssv1807785,nssv1807790,nssv1807842,nssv1807853,nssv1807838,nssv1807815,nssv1807766,nssv1807828,nssv1807758,nssv1807848,nssv1807772,nssv1807845,nssv1807771,nssv1807823,nssv1807777,nssv1807824,nssv1807776,nssv1807794,nssv1807836,nssv1807852,nssv1807767,nssv1807816,nssv1807775,nssv1807811,nssv1807770,nssv1807827,nssv1807781,nssv1807757,nssv1807779,nssv1807795,nssv1807786,nssv1807803,nssv1807782,nssv1807787,nssv1807843,nssv1807830,nssv1807837,nssv1807800,nssv1807765,nssv1807791,nssv1807768,nssv1807846,nssv1807759,nssv1807783,nssv1807799,nssv1807818,nssv1807821,nssv1807796,nssv1807792,nssv1807847,nssv1807832,nssv1807850,nssv1807801,nssv1807820,nssv1807807,nssv1807812,nssv1807780,nssv1807798,nssv1807813,nssv1807804,nssv1807817,nssv1807793,nssv1807806,nssv1807805,nssv1807814,nssv1807825,nssv1807851 M 97 10 0 KLHL20 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv825420 1 172010192 172011058 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436367 M 31 0 1 KLHL20 NA18542 esv3418161 1 172021508 172021520 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863777 M 185 1 0 KLHL20 NA12005 esv2758978 1 172077265 172222566 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757761 M 270 0 1 DARS2,GAS5,GAS5-AS1,RC3H1,SERPINC1,SNORD44,SNORD47,SNORD74,SNORD75,SNORD76,SNORD77,SNORD78,SNORD79,SNORD80,SNORD81,ZBTB37 NA18523 esv3380371 1 172130559 172130582 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863778 M 185 1 0 "" NA12005 nsv8535 1 172130609 172133423 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv26548 M 31 0 1 "" NA10839 esv22323 1 172196277 172199145 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18042 M 40 0 1 RC3H1 NA18523 esv2646154 1 172210658 172212291 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5294327 M 1 0 1 RC3H1 NA18507 esv9249 1 172211137 172211942 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31690 M 1 0 0 RC3H1 esv2273536 1 172211163 172211905 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4644754 M 1 0 1 RC3H1 NA18507 esv4673 1 172211316 172211783 CNV loss Wang_et_al_2008 18987735 Sequencing essv27114 M 1 0 1 RC3H1 YH nsv831937 1 172215996 172398086 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1451494 M 95 1 0 RABGAP1L,RC3H1 nsv825431 1 172240982 172242777 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440847 M 31 0 1 "" NA18969 nsv465661 1 172281130 172419311 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541421 M 1557 0 1 RABGAP1L NINDS_156 nsv548193 1 172281130 172419311 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173350 M 17421 0 1 RABGAP1L NINDS_156 esv1162770 1 172372046 172372046 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3782988 M 2 1 0 "" HuRef nsv465672 1 172399874 172736528 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541429 M 1557 0 1 GPR52,RABGAP1L HGDP01035 nsv548194 1 172399874 172736528 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173351 M 17421 0 1 GPR52,RABGAP1L HGDP01035 nsv470746 1 172417473 172736528 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547786 M 443 0 1 GPR52,RABGAP1L HGDP01035 nsv825442 1 172426744 172429131 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1424386,nssv1432430 M 31 0 2 RABGAP1L NA18947,NA18972 nsv1008993 1 172446642 172597981 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704819 M 29084 0 1 RABGAP1L nsv528675 1 172462252 172486021 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705315 M 2026 0 1 RABGAP1L esv3308578 1 172599621 172599622 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840264,essv7840721 M 185 2 0 RABGAP1L NA12878,NA12891 esv3306824 1 172599623 172599624 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7764596,essv7765798,essv7766348,essv7766003,essv7766498,essv7764933,essv7767903 M 185 7 0 RABGAP1L NA11840,NA12812,NA12814,NA12815,NA12873,NA12878,NA12891 esv3359248 1 172599625 172599705 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673805,essv8673804 M 185 2 0 RABGAP1L NA12878,NA12891 esv2544302 1 172702823 172704138 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5253243 M 1 0 1 RABGAP1L NA18507 nsv1009056 1 172724155 172816288 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502492 M 29084 0 1 RABGAP1L nsv999295 1 172724155 172863584 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496901,nssv3494603 M 29084 0 2 RABGAP1L nsv548195 1 172735625 172785899 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728817 M 17421 0 1 RABGAP1L esv2758979 1 172735904 172836399 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757762 M 270 1 0 RABGAP1L NA18987 esv2632719 1 172750523 172751442 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5227711 M 1 1 0 RABGAP1L NA18507 esv3381133 1 172751252 172751271 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596880 M 185 1 0 RABGAP1L NA11894 esv3305381 1 172751259 172751260 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7822984,essv7815068,essv7771765,essv7798517,essv7804226 M 185 5 0 RABGAP1L NA11894,NA12776,NA18511,NA18526,NA18853 esv3414606 1 172751260 172751293 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901875,essv8901874,essv8901878,essv8901876,essv8901877 M 185 5 0 RABGAP1L NA11894,NA12776,NA18511,NA18526,NA18853 nsv477349 1 172783123 172783123 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016023 M 9 1 0 RABGAP1L NA18517 nsv548196 1 172791758 172825744 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728818 M 17421 0 1 RABGAP1L esv2762198 1 172819228 172825805 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006668 M 1109 0 1 RABGAP1L RW_0540 nsv548197 1 172998219 173007640 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728819 M 17421 0 1 RABGAP1L nsv548198 1 172998219 173067495 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv728820 M 17421 0 1 RABGAP1L dgv631n54 1 173060314 173068371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548203,nsv548199,nsv548202,nsv548200,nsv548201,nsv548204,nsv548207,nsv548205,nsv548206 M 17421 0 12 RABGAP1L esv3890771 1 173060767 173068262 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780287 M 3017 0 1 RABGAP1L nsv516953 1 173060767 173068262 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv684088,nssv667020,nssv674815,nssv667209,nssv655321,nssv681207,nssv667260,nssv683552,nssv673769,nssv662876,nssv668038,nssv661485,nssv656466,nssv669329,nssv692290,nssv685628,nssv658405,nssv665088,nssv659186,nssv669006,nssv681242,nssv653293,nssv676975,nssv654820,nssv687686,nssv680548,nssv676536,nssv667701,nssv684419,nssv693004,nssv654147,nssv656604,nssv689619,nssv672695,nssv661802,nssv686413,nssv690670,nssv680872,nssv687121,nssv693813,nssv682636,nssv661008,nssv681548,nssv657471,nssv674922,nssv687470,nssv689849,nssv691616,nssv668872,nssv683755,nssv660506,nssv666986,nssv671253,nssv690880,nssv668120,nssv688712,nssv662119,nssv658163,nssv659239,nssv654840,nssv685175,nssv693251,nssv684664,nssv695402,nssv671740,nssv653251,nssv667437,nssv657758,nssv688608,nssv679149,nssv655495,nssv667835,nssv659096,nssv660665,nssv656085,nssv656346,nssv653107,nssv687143,nssv683911,nssv690088,nssv684850,nssv692307,nssv690190,nssv672125,nssv653495,nssv690061,nssv658864,nssv689601,nssv668800,nssv660644,nssv666688,nssv679937,nssv667673,nssv679161,nssv666232,nssv662304 M 2026 1 95 RABGAP1L dgv16n17 1 173060767 173071745 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437280,nsv437291,nsv437302 M 60 0 3 RABGAP1L NA10830,NA10835,NA10846 nsv8547 1 173061164 173068579 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22759,nssv22092,nssv24578,nssv20425,nssv21765,nssv23082,nssv23698,nssv26183 M 31 0 8 RABGAP1L NA18502,NA18537,NA18563,NA18564,NA18860,NA18942,NA18980,NA19007 nsv947451 1 173061287 173068265 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2759213,nssv2764675 M 97 0 2 RABGAP1L HGDP00542,HGDP01307 esv2764238 1 173061601 173075228 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006696,essv7006694,essv7006690,essv7006706,essv7006674,essv7006697,essv7006712,essv7006673,essv7006681,essv7006708,essv7006691,essv7006686,essv7006693,essv7006692,essv7006687,essv7006709,essv7006671,essv7006701,essv7006682,essv7006713,essv7006669,essv7006675,essv7006683,essv7006715,essv7006676,essv7006670,essv7006680,essv7006685,essv7006705,essv7006684,essv7006714,essv7006703,essv7006699,essv7006695,essv7006679,essv7006698,essv7006672,essv7006702,essv7006710,essv7006704,essv7006688,essv7006677,essv7006707 M 1109 0 43 RABGAP1L RW_0022,RW_0041,RW_0045,RW_0093,RW_0116,RW_0124,RW_0132,RW_0139,RW_0143,RW_0147,RW_0158,RW_0164,RW_0169,RW_0170,RW_0192,RW_0195,RW_0196,RW_0210,RW_0222,RW_0223,RW_0243,RW_0273,RW_0286,RW_0293,RW_0296,RW_0304,RW_0307,RW_0324,RW_0329,RW_0330,RW_0341,RW_0346,RW_0354,RW_0357,RW_0519,RW_0555,RW_0559,RW_0595,RW_0597,RW_0613,RW_0614,RW_0623,RW_0658 esv2763725 1 173062498 173069464 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7003201,essv7002856,essv7002722,essv7003278,essv7002867,essv7003212,essv7002990,essv7002968,essv7003267,essv7002756,essv7003245,essv7003045,essv7003056,essv7003101,essv7003178,essv7003112,essv7002778,essv7002767,essv7003256,essv7003123,essv7002889,essv7003156,essv7002944,essv7003067,essv7003223,essv7002933,essv7002745,essv7003167,essv7003134,essv7002955,essv7002911,essv7003190,essv7003079,essv7002900,essv7003023,essv7003234,essv7002922,essv7002979,essv7003145,essv7003012,essv7002833,essv7002844,essv7003034,essv7002800,essv7002811,essv7002878,essv7002789,essv7002822,essv7003001,essv7003090,essv7002733 M 1109 0 51 RABGAP1L SW_0003,SW_0005,SW_0006,SW_0017,SW_0020,SW_0046,SW_0059,SW_0061,SW_0169,SW_0172,SW_0173,SW_0183,SW_0189,SW_0269,SW_0554,SW_0757,SW_0759,SW_0786,SW_0814,SW_0831,SW_0857,SW_0860,SW_0872,SW_0885,SW_1012,SW_1021,SW_1023,SW_1028,SW_1044,SW_1047,SW_1088,SW_1105,SW_1116,SW_1125,SW_1131,SW_1162,SW_1163,SW_1165,SW_1175,SW_1189,SW_1199,SW_1208,SW_1244,SW_1249,SW_1285,SW_1361,SW_1424,SW_1436,SW_1472,SW_1478,SW_1517 dgv88n67 1 173063044 173068501 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825453,nsv825476,nsv825464 M 31 0 13 RABGAP1L AK12,AK16,NA18537,NA18542,NA18547,NA18564,NA18570,NA18582,NA18592,NA18942,NA18949,NA18951,NA18997 nsv442393 1 173063179 173068463 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619078,nssv1619100,nssv1619066,nssv1619091,nssv1619112,nssv1619101,nssv1619107,nssv1619132,nssv1619111,nssv1619137,nssv1619106,nssv1619069,nssv1619072,nssv1619068,nssv1619121,nssv1619128,nssv1619120,nssv1619129,nssv1619140,nssv1619074,nssv1619127,nssv1619134,nssv1619075,nssv1619117,nssv1619092,nssv1619118,nssv1619110,nssv1619070,nssv1619130,nssv1619138,nssv1619096,nssv1619071,nssv1619119,nssv1619105,nssv1619065,nssv1619098,nssv1619103,nssv1619076,nssv1619104,nssv1619133,nssv1619135,nssv1619077,nssv1619084,nssv1619125,nssv1619093,nssv1619124,nssv1619095,nssv1619131,nssv1619086,nssv1619080,nssv1619082,nssv1619123,nssv1619113,nssv1619089,nssv1619067,nssv1619099,nssv1619073,nssv1619109,nssv1619114,nssv1619108,nssv1619116,nssv1619102,nssv1619097,nssv1619088,nssv1619126,nssv1619083,nssv1619139,nssv1619115,nssv1619079,nssv1619136,nssv1619081,nssv1619094,nssv1619087,nssv1619090,nssv1619085,nssv1619122 M 270 0 76 RABGAP1L NA06993,NA07056,NA10830,NA10835,NA10846,NA10860,NA11829,NA11840,NA11993,NA12144,NA12154,NA12234,NA12248,NA12264,NA12751,NA12760,NA12813,NA18500,NA18501,NA18502,NA18524,NA18532,NA18537,NA18542,NA18547,NA18562,NA18563,NA18564,NA18570,NA18573,NA18576,NA18579,NA18582,NA18592,NA18608,NA18612,NA18621,NA18623,NA18632,NA18633,NA18635,NA18636,NA18859,NA18860,NA18912,NA18940,NA18942,NA18945,NA18949,NA18951,NA18953,NA18960,NA18964,NA18971,NA18976,NA18978,NA18980,NA18990,NA18992,NA18994,NA18995,NA18997,NA18998,NA19003,NA19007,NA19099,NA19101,NA19102,NA19103,NA19128,NA19131,NA19137,NA19138,NA19153,NA19192,NA19194 esv26467 1 173063237 173068473 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19181 M 40 0 6 RABGAP1L NA07045,NA11993,NA18502,NA19099,NA19114,NA19147 nsv514019 1 173063248 173068448 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2851859,nssv2851827,nssv2851418,nssv2853219,nssv2851817,nssv2851836,nssv2851844,nssv2851847,nssv2851871,nssv2851845,nssv2851867,nssv2851834,nssv2851857,nssv2853220,nssv2851839,nssv2851822,nssv2851856,nssv2851414,nssv2851870,nssv2851869,nssv2851855,nssv2851823,nssv2853218,nssv2851831,nssv2851416,nssv2851850,nssv2851849,nssv2851824,nssv2851436,nssv2851429,nssv2851424,nssv2851425,nssv2851877,nssv2851420,nssv2851439,nssv2851433,nssv2851421,nssv2851413,nssv2851862,nssv2851868,nssv2851863,nssv2851842,nssv2851828,nssv2851417,nssv2851825,nssv2851848,nssv2851820,nssv2851443,nssv2851864,nssv2851866,nssv2851819,nssv2851841,nssv2851431,nssv2851873,nssv2851830,nssv2851838,nssv2851874,nssv2851861,nssv2853217,nssv2851428,nssv2851818,nssv2851872,nssv2851422,nssv2851851,nssv2853221,nssv2853222,nssv2851441,nssv2851865,nssv2851427,nssv2851446,nssv2851843,nssv2851875,nssv2851878,nssv2851840,nssv2851415,nssv2851835,nssv2851858,nssv2851434,nssv2851419,nssv2851445,nssv2851826,nssv2851432,nssv2851430,nssv2851854,nssv2851437,nssv2851846,nssv2851832,nssv2851833,nssv2851860,nssv2851442,nssv2853223,nssv2851852,nssv2851444,nssv2851423,nssv2851426,nssv2851853,nssv2851837,nssv2851816,nssv2851438,nssv2851829,nssv2851821,nssv2851440,nssv2851876,nssv2851435 M 2366 0 104 RABGAP1L NA06993,NA06995,NA07056,NA07435,NA10830,NA10835,NA10846,NA10860,NA11829,NA11840,NA11893,NA11993,NA12045,NA12144,NA12154,NA12234,NA12248,NA12264,NA12283,NA12286,NA12347,NA12399,NA12751,NA12760,NA12766,NA12775,NA12813,NA12889,NA18487,NA18500,NA18501,NA18510,NA18518,NA18524,NA18532,NA18537,NA18542,NA18547,NA18562,NA18563,NA18564,NA18570,NA18573,NA18576,NA18579,NA18582,NA18592,NA18608,NA18612,NA18621,NA18632,NA18633,NA18635,NA18636,NA18859,NA18860,NA18874,NA18875,NA18908,NA18910,NA18940,NA18942,NA18945,NA18949,NA18953,NA18960,NA18964,NA18971,NA18978,NA18980,NA18990,NA18992,NA18994,NA18995,NA18997,NA18998,NA19003,NA19007,NA19099,NA19101,NA19102,NA19103,NA19114,NA19115,NA19118,NA19128,NA19131,NA19137,NA19138,NA19147,NA19153,NA19175,NA19177,NA19184,NA19186,NA19189,NA19192,NA19194,NA21388,NA21389,NA21390,NA21489,NA21490,NA21581 dgv632n54 1 173064490 173067708 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548209,nsv548208,nsv548210,nsv548212,nsv548211 M 17421 0 36 RABGAP1L dgv43n27 1 173064490 173068262 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv465883,nsv466005,nsv466038,nsv465728,nsv465772,nsv465916,nsv465761,nsv465683,nsv465850,nsv465938,nsv466016,nsv466061,nsv465927,nsv465961,nsv465894,nsv465994,nsv466027,nsv465705,nsv465716,nsv465783,nsv465816,nsv465827,nsv465950,nsv465905,nsv465872,nsv465750,nsv465839,nsv465861,nsv465983,nsv465739,nsv466049,nsv465805,nsv465794,nsv465972,nsv465694 M 1557 0 35 RABGAP1L 1780846322_A,1780862020_A,1780862196_A,1780862263_A,1780862390_A,1780862419_A,1782681095_A,1782681144_A,1798860251_A,1798860491_A,HGDP00064,HGDP00100,HGDP00298,HGDP00338,HGDP00545,HGDP00590,HGDP00601,HGDP00629,HGDP00649,HGDP00670,HGDP00975,HGDP01172,HGDP01203,HGDP01212,HGDP01220,HGDP01227,HGDP01248,HGDP01323,HGDP01326,HGDP01337,HGDP01339,NINDS_127,NINDS_17,NINDS_204,NINDS_253 nsv438104 1 173064490 173068262 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469485,nssv469474,nssv469519,nssv469496,nssv469507,nssv469530 M 269 0 6 RABGAP1L NA10830,NA10835,NA10846,NA12144,NA12154,NA12248 nsv818578 1 173064490 173068262 CNV gain+loss Wang_et_al_2007 17921354 SNP array nssv1415810,nssv1417137,nssv1417158,nssv1415809,nssv1417593,nssv1417553,nssv1417223,nssv1415811,nssv1417358 M 112 1 8 RABGAP1L NA10860,NA11992,NA11993,NA18542,NA18547,NA18576,NA18612,NA18971,NA18978 dgv633n54 1 173064490 173068371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548233,nsv548215,nsv548232,nsv548224,nsv548222,nsv548223,nsv548214,nsv548238,nsv548234,nsv548213,nsv548229,nsv548236,nsv548237,nsv548228 M 17421 0 243 RABGAP1L 1780846322_A,1780862020_A,1780862196_A,1780862263_A,1780862390_A,1780862419_A,1782681095_A,1782681144_A,1798860251_A,1798860491_A,HGDP00064,HGDP00100,HGDP00298,HGDP00338,HGDP00545,HGDP00590,HGDP00601,HGDP00629,HGDP00649,HGDP00670,HGDP00975,HGDP01172,HGDP01203,HGDP01210,HGDP01212,HGDP01220,HGDP01227,HGDP01248,HGDP01323,HGDP01326,HGDP01337,HGDP01339,NINDS_127,NINDS_17,NINDS_204,NINDS_253 dgv634n54 1 173064490 173069354 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548216,nsv548241 M 17421 0 5 RABGAP1L nsv548217 1 173064490 173078949 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729035,nssv729036 M 17421 0 2 RABGAP1L dgv635n54 1 173064881 173067708 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548225,nsv548221,nsv548220,nsv548219,nsv548218,nsv548227,nsv548231,nsv548226,nsv548235,nsv548230 M 17421 0 19 RABGAP1L dgv636n54 1 173065675 173068371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548240,nsv548239,nsv548242 M 17421 0 3 RABGAP1L esv274970 1 173070229 173071590 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2586158,essv2585768 M 1250 1 1 RABGAP1L nsv946510 1 173077872 173086170 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807862,nssv1807925,nssv1807876,nssv1807945,nssv1807931,nssv1807922,nssv1807937,nssv1807902,nssv1807859,nssv1807916,nssv1807934,nssv1807899,nssv1807938,nssv1807947,nssv1807863,nssv1807919,nssv1807871,nssv1807911,nssv1807869,nssv1807946,nssv1807885,nssv1807923,nssv1807932,nssv1807886,nssv1807867,nssv1807905,nssv1807882,nssv1807907,nssv1807872,nssv1807906,nssv1807939,nssv1807929,nssv1807866,nssv1807895,nssv1807864,nssv1807912,nssv1807936,nssv1807881,nssv1807874,nssv1807890,nssv1807861,nssv1807924,nssv1807935,nssv1807926,nssv1807933,nssv1807887,nssv1807856,nssv1807920,nssv1807883,nssv1807921,nssv1807868,nssv1808565,nssv1807878,nssv1807944,nssv1807860,nssv1807900,nssv1807855,nssv1807913,nssv1807870,nssv1808566,nssv1807875,nssv1807894,nssv1807873,nssv1808564,nssv1807940,nssv1807927,nssv1807857,nssv1807880,nssv1807858,nssv1807892,nssv1807879,nssv1807884,nssv1807865,nssv1807942,nssv1807891,nssv1807930,nssv1807897,nssv1807917,nssv1807896,nssv1807877,nssv1807915,nssv1807898,nssv1807943,nssv1807918,nssv1807908,nssv1807893,nssv1807928,nssv1807889,nssv1807903,nssv1807888,nssv1807909,nssv1807901,nssv1807904,nssv1807914,nssv1807941,nssv1807854,nssv1807910 M 97 10 0 RABGAP1L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474705 1 173132829 173132829 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014480 M 9 1 0 RABGAP1L NA19240 nsv512750 1 173173416 173173829 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625379 M 1 1 0 RABGAP1L 1 esv1344689 1 173173530 173173530 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3899215 M 2 1 0 RABGAP1L HuRef nsv1001000 1 173210831 173245476 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704820 M 29084 1 0 CACYBP,RABGAP1L nsv946511 1 173245690 173246190 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808582,nssv1808635,nssv1808575,nssv1808628,nssv1808579,nssv1808594,nssv1808570,nssv1808642,nssv1808572,nssv1808602,nssv1808651,nssv1808629,nssv1808650,nssv1808618,nssv1808596,nssv1808659,nssv1808584,nssv1808634,nssv1808649,nssv1808620,nssv1808648,nssv1808612,nssv1808645,nssv1808656,nssv1808592,nssv1808603,nssv1808580,nssv1808599,nssv1808589,nssv1808623,nssv1808574,nssv1808639,nssv1808595,nssv1808641,nssv1808577,nssv1808619,nssv1808587,nssv1808625,nssv1808646,nssv1808600,nssv1808585,nssv1808607,nssv1808578,nssv1808632,nssv1808647,nssv1808633,nssv1808569,nssv1808621,nssv1808652,nssv1808590,nssv1808573,nssv1808622,nssv1808588,nssv1808597,nssv1808644,nssv1808593,nssv1808583,nssv1808658,nssv1808568,nssv1808630,nssv1808576,nssv1808605,nssv1808653,nssv1808610,nssv1808586,nssv1808604,nssv1808598,nssv1808638,nssv1808591,nssv1808626,nssv1808571,nssv1808662,nssv1808581,nssv1808567,nssv1808631,nssv1808617,nssv1808608,nssv1808663,nssv1808615,nssv1808613,nssv1808643,nssv1808609,nssv1808636,nssv1808611,nssv1808661,nssv1808654,nssv1808601,nssv1808614,nssv1808657,nssv1808627,nssv1808637,nssv1808624,nssv1808640,nssv1808655,nssv1808606,nssv1808660,nssv1808616 M 97 10 0 CACYBP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv508048 1 173259807 173265807 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622300,nssv621482,nssv624224,nssv618515 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 nsv1011472 1 173279788 173309508 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491984 M 29084 0 1 TNN nsv946512 1 173279794 173285696 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808750,nssv1808735,nssv1808748,nssv1808712,nssv1808744,nssv1808694,nssv1808747,nssv1808697,nssv1808672,nssv1808703,nssv1808671,nssv1808752,nssv1808746,nssv1808713,nssv1808679,nssv1808732,nssv1808676,nssv1808721,nssv1808669,nssv1808722,nssv1808681,nssv1808724,nssv1808677,nssv1808753,nssv1808673,nssv1808696,nssv1808686,nssv1808709,nssv1808692,nssv1808725,nssv1808675,nssv1808731,nssv1808689,nssv1808756,nssv1808695,nssv1808717,nssv1808742,nssv1808720,nssv1808693,nssv1808736,nssv1808684,nssv1808700,nssv1808682,nssv1808687,nssv1808743,nssv1808691,nssv1808670,nssv1808716,nssv1808680,nssv1808729,nssv1808683,nssv1808715,nssv1808665,nssv1808738,nssv1808674,nssv1808701,nssv1808666,nssv1808718,nssv1808741,nssv1808751,nssv1808688,nssv1808726,nssv1808667,nssv1808690,nssv1808685,nssv1808699,nssv1808668,nssv1808707,nssv1808678,nssv1808708,nssv1808749,nssv1808730,nssv1808745,nssv1808704,nssv1808719,nssv1808739,nssv1808664,nssv1808740,nssv1808759,nssv1808760,nssv1808723,nssv1808733,nssv1808758,nssv1808698,nssv1808754,nssv1808728,nssv1808706,nssv1808727,nssv1808702,nssv1808711,nssv1808757,nssv1808734,nssv1808755,nssv1808710,nssv1808737,nssv1808714,nssv1808705 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv29213 1 173289009 173292553 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10790 M 40 0 2 "" NA19108,NA19190 esv275171 1 173294595 173297731 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585273 M 1250 0 1 "" nsv825487 1 173298232 173380195 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1428058 M 31 1 0 TNN AK10 nsv3609 1 173313035 173361029 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10357,nssv2608 M 9 0 2 TNN NA18555,NA18956 nsv508648 1 173323010 173388536 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618991,nssv622779 M 4 0 2 TNN NA10860,NA18994 esv2566793 1 173336798 173344125 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5280568 M 1 0 1 TNN NA18507 nsv498693 1 173337104 173343296 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585407 M 9 0 1 TNN nsv3620 1 173337939 173339152 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4851 M 9 1 0 TNN NA19129 esv28085 1 173338098 173342827 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17945 M 40 2 0 TNN NA18916,NA19129 nsv821166 1 173338098 173342827 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420758 M 1 0 1 TNN NA10851 esv2159196 1 173358068 173358449 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4518004 M 1 0 1 TNN NA18507 nsv160653 1 173358217 173358268 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179231 M 24 TNN nsv522101 1 173376140 173417806 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694873 M 2026 0 1 KIAA0040,TNN nsv528874 1 173406942 173417806 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705554 M 2026 0 1 KIAA0040 esv28699 1 173428557 173429998 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15667 M 40 0 1 KIAA0040 NA12156 esv2439667 1 173466835 173468696 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5285280 M 1 0 0 "" NA18507 esv9617 1 173466974 173468519 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv32058 M 1 0 0 "" esv1147921 1 173476358 173476358 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3915618 M 2 1 0 "" HuRef nsv831948 1 173496254 173673926 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441520,nssv1451505,nssv1441521 M 95 0 3 TNR esv28028 1 173549739 173550386 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9926 M 40 0 1 "" NA12828 esv2764232 1 173654620 173771017 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006716,essv7006717 M 1109 2 0 TNR RW_0155,RW_0253 esv1005191 1 173662563 173662632 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580736 M 3 0 1 TNR HuRef esv1283541 1 173662640 173662710 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3768719 M 2 0 1 TNR HuRef nsv159978 1 173662676 173662737 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178556 M 24 TNR nsv524232 1 173670132 173678601 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700122 M 2026 0 1 TNR esv21661 1 173678193 173678780 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10985 M 40 0 2 TNR NA18861,NA19147 nsv517137 1 173678535 173678601 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv656856,nssv688982,nssv657248,nssv682338,nssv683938,nssv677118,nssv693365,nssv676402,nssv692108,nssv669181,nssv653846,nssv661290,nssv662803,nssv673770 M 2026 0 14 TNR esv3333604 1 173694352 173695350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692077 M 185 1 0 TNR NA19239 dgv466n100 1 173695580 174032412 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014015,nsv998119,nsv1008620,nsv1011962,nsv1008727,nsv1000135,nsv1012012,nsv1004585,nsv999586 M 29084 9 0 TNR nsv527256 1 173697478 173848873 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703660 M 2026 1 0 TNR nsv466072 1 173697478 174005626 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541710 M 1557 1 0 TNR HGDP00885 nsv528975 1 173697478 174023865 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705674 M 2026 1 0 TNR dgv637n54 1 173697478 174039001 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548244,nsv548243,nsv548245 M 17421 4 0 TNR HGDP00885 nsv3633 1 173707248 173739072 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10362 M 9 1 0 TNR NA18956 esv33328 1 173713206 174176624 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv93203,essv97518 M 51 2 0 TNR 21616,22170 nsv508659 1 173762403 173814531 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618992 M 4 0 1 TNR NA10860 nsv3644 1 173769302 173802206 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv334 M 9 1 0 TNR NA19240 nsv831959 1 173843007 174043352 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441522 M 95 1 0 TNR nsv473139 1 173877534 173877534 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018945 M 9 1 0 TNR NA19129 nsv528915 1 174002003 174005626 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705601 M 2026 0 1 "" nsv3655 1 174034480 174068298 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7838 M 9 1 0 "" NA12156 nsv474155 1 174056686 174056686 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019256 M 9 1 0 "" NA18507 esv2523812 1 174078113 174079142 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5313456 M 1 1 0 "" NA18507 nsv522255 1 174094306 174116521 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695035 M 2026 0 1 "" nsv946515 1 174156760 174170105 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1806787,nssv1806766,nssv1808768,nssv1806743,nssv1806786,nssv1806750,nssv1806735,nssv1806761,nssv1806726,nssv1806748,nssv1808769,nssv1806772,nssv1806789,nssv1806777,nssv1808764,nssv1806776,nssv1806724,nssv1806740,nssv1806720,nssv1806768,nssv1808767,nssv1806773,nssv1806721,nssv1806780,nssv1808766,nssv1806739,nssv1806718,nssv1806767,nssv1806719,nssv1806746,nssv1806783,nssv1806730,nssv1806729,nssv1806800,nssv1806728,nssv1806764,nssv1806717,nssv1806751,nssv1806723,nssv1806796,nssv1806785,nssv1806760,nssv1806782,nssv1806792,nssv1806781,nssv1806747,nssv1806722,nssv1806763,nssv1806788,nssv1806770,nssv1808771,nssv1806757,nssv1806733,nssv1806769,nssv1808770,nssv1806794,nssv1808772,nssv1806759,nssv1808762,nssv1806798,nssv1806725,nssv1806791,nssv1806790,nssv1806742,nssv1806732,nssv1806799,nssv1808765,nssv1806774,nssv1806784,nssv1806754,nssv1808763,nssv1806734,nssv1806716,nssv1806795,nssv1806779,nssv1806755,nssv1806745,nssv1806731,nssv1806756,nssv1808761,nssv1806736,nssv1806749,nssv1806744,nssv1806771,nssv1806793,nssv1806738,nssv1806762,nssv1806737,nssv1806758,nssv1806775,nssv1806727,nssv1806741,nssv1806752,nssv1806797,nssv1806753,nssv1806778,nssv1806765 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947452 1 174211593 174214443 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2759749 M 97 1 0 RFWD2 HGDP00778 nsv548246 1 174310420 174402896 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729108 M 17421 0 1 RFWD2 esv3890782 1 174325405 174402896 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780723 M 3017 0 1 RFWD2 esv2576730 1 174368194 174369801 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5179724 M 1 0 1 RFWD2 NA18507 esv1757113 1 174368567 174368682 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3705025 M 2 0 1 RFWD2 HuRef nsv8558 1 174401686 174408539 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv27167 M 31 0 1 RFWD2 NA19221 nsv525586 1 174491369 174543675 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701725 M 2026 1 0 "" nsv1008833 1 174499608 174542998 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704823,nssv3488148,nssv3704822,nssv3704825,nssv3704824,nssv3497956,nssv3491860 M 29084 7 0 "" nsv548247 1 174500555 174543675 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729112,nssv729111,nssv729109,nssv729110 M 17421 4 0 "" nsv159951 1 174503382 174506423 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178529 M 24 "" nsv548248 1 174509713 174514142 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729113 M 17421 0 1 "" esv274991 1 174523240 174534667 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585821,essv2585612 M 1250 1 1 "" esv2340284 1 174536473 174536894 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4501336 M 1 0 1 "" NA18507 esv1003600 1 174536647 174536704 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584563 M 3 0 1 "" HuRef nsv831970 1 174652785 174835830 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441523 M 95 1 0 PAPPA2 nsv1004658 1 174678797 174727043 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704826 M 29084 1 0 PAPPA2 dgv467n100 1 174704846 174741803 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009108,nsv997504 M 29084 2 0 PAPPA2 nsv511719 1 174743629 174746064 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626361 M 1 0 1 PAPPA2 1 esv2467680 1 174744020 174745992 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5326679 M 1 0 1 PAPPA2 NA18507 esv2094934 1 174744666 174745604 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4647894 M 1 0 1 PAPPA2 NA18507 esv6740 1 174744668 174745657 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29181 M 1 0 0 PAPPA2 esv1170602 1 174744842 174745398 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4364904 M 2 0 1 PAPPA2 HuRef nsv159940 1 174744856 174745411 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178518 M 24 PAPPA2 esv275585 1 174773144 174774758 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585671 M 1250 0 1 PAPPA2 nsv831982 1 174797244 174978591 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441524 M 95 1 0 PAPPA2 nsv472335 1 174817099 174817099 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020497 M 9 1 0 PAPPA2 NA18555 esv992315 1 174829805 174838636 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563524 M 3 0 1 PAPPA2 HuRef esv1005770 1 174836386 174836455 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573272 M 3 0 1 PAPPA2 HuRef esv1596288 1 174836389 174836459 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4254674 M 2 0 1 PAPPA2 HuRef nsv3666 1 174843318 174887633 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2609,nssv9379 M 9 0 2 PAPPA2 NA18517,NA18555 nsv946516 1 174851463 174852463 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1806808,nssv1806827,nssv1806816,nssv1806874,nssv1806805,nssv1806873,nssv1806823,nssv1806865,nssv1806803,nssv1806838,nssv1806884,nssv1806864,nssv1806821,nssv1806889,nssv1806806,nssv1806862,nssv1806817,nssv1806897,nssv1806832,nssv1806893,nssv1806815,nssv1806843,nssv1806887,nssv1806869,nssv1806818,nssv1806845,nssv1806802,nssv1806863,nssv1806825,nssv1806854,nssv1806880,nssv1806836,nssv1806830,nssv1806861,nssv1806820,nssv1806870,nssv1806814,nssv1806801,nssv1806811,nssv1806840,nssv1806826,nssv1806837,nssv1806882,nssv1806867,nssv1806878,nssv1806848,nssv1806819,nssv1806888,nssv1806807,nssv1806895,nssv1806885,nssv1806857,nssv1806809,nssv1806877,nssv1806829,nssv1806856,nssv1806812,nssv1806860,nssv1806883,nssv1806871,nssv1806810,nssv1806855,nssv1806881,nssv1806892,nssv1806886,nssv1806850,nssv1806813,nssv1806868,nssv1806822,nssv1806891,nssv1806804,nssv1806839,nssv1806879,nssv1806851,nssv1806859,nssv1806866,nssv1806896,nssv1806847,nssv1806876,nssv1806894,nssv1806844,nssv1806842,nssv1806828,nssv1806846,nssv1806852,nssv1806833,nssv1806841,nssv1806890,nssv1806872,nssv1806849,nssv1806835,nssv1806834,nssv1806824,nssv1806858,nssv1806831,nssv1806853,nssv1806875 M 97 10 0 PAPPA2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv28963 1 174857237 174879887 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17899 M 40 0 1 PAPPA2 NA18517 nsv498694 1 174857251 174879945 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585408 M 9 0 1 PAPPA2 nsv818589 1 174857914 174871187 CNV loss Wang_et_al_2007 17921354 SNP array nssv1416423 M 112 0 1 PAPPA2 NA18517 nsv466094 1 174913006 174951576 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541727 M 1557 0 1 PAPPA2 HGDP01100 nsv548249 1 174913006 174951576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173915 M 17421 0 1 PAPPA2 HGDP01100 esv33914 1 174918134 174918737 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv93248 M 51 1 0 PAPPA2 22170 nsv466105 1 174934433 174993725 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541737 M 1557 0 1 PAPPA2 1780862081_A nsv548250 1 174934433 174993725 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173916 M 17421 0 1 PAPPA2 1780862081_A esv275131 1 174944283 174951055 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2586178,essv2585392 M 1250 1 1 PAPPA2 nsv508049 1 174954105 174960105 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624225 M 4 0 0 PAPPA2 NA18994 nsv3677 1 175079080 175124444 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7142 M 9 0 1 ASTN1 NA12156 nsv476444 1 175183845 175183845 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020017 M 9 1 0 ASTN1 NA12878 nsv1000611 1 175346555 175373416 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500686 M 29084 1 0 ASTN1 esv3364101 1 175538581 175538600 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678348 M 185 1 0 "" NA12878 esv3308321 1 175538590 175538591 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839727 M 185 1 0 "" NA12878 nsv3688 1 175572780 175607794 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv342 M 9 1 0 "" NA19240 nsv947453 1 175579018 175582844 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765526 M 97 1 0 "" HGDP00665 nsv3699 1 175579368 175624258 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7860 M 9 0 1 "" NA12156 esv1372090 1 175634940 175634940 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3677720 M 2 1 0 "" HuRef esv1508179 1 175635136 175635136 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3744973 M 2 1 0 "" HuRef dgv234e59 1 175654988 175655206 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302461,esv3302901 M 185 48 0 "" NA06986,NA07000,NA07346,NA11829,NA11919,NA11931,NA11995,NA12003,NA12043,NA12044,NA12144,NA12154,NA12156,NA12249,NA12717,NA12750,NA12751,NA12892,NA18520,NA18537,NA18552,NA18555,NA18563,NA18566,NA18571,NA18572,NA18576,NA18577,NA18582,NA18592,NA18603,NA18605,NA18608,NA18609,NA18853,NA18870,NA18871,NA18916,NA18943,NA18947,NA18956,NA18964,NA18980,NA19102,NA19225,NA19238,NA19240,NA19257 esv3421735 1 175654993 175655195 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670851,essv8670853,essv8670850 M 185 3 0 "" NA12892,NA19238,NA19240 nsv548251 1 175702026 175896346 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729114 M 17421 0 1 "" nsv508050 1 175750349 175756349 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624226 M 4 0 0 "" NA18994 nsv1004071 1 175756913 175778077 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487608 M 29084 1 0 "" nsv831993 1 175892010 176053350 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441525 M 95 1 0 "" nsv548252 1 175994680 176664542 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729115 M 17421 1 0 LOC730102,RASAL2,RASAL2-AS1,SEC16B nsv518310 1 176012077 176131177 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695741 M 2026 0 1 "" nsv548253 1 176073461 176218608 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729116 M 17421 0 1 SEC16B nsv1010839 1 176148795 176194277 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499073,nssv3704828,nssv3498097 M 29084 0 3 SEC16B nsv523131 1 176247682 176267144 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698835 M 2026 0 1 LOC730102 esv3409640 1 176252954 176253008 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901879 M 185 1 0 LOC730102 NA18907 nsv477525 1 176312647 176312647 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011611 M 9 1 0 "" NA18517 esv3416886 1 176344651 176344794 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652055 M 185 1 0 RASAL2 NA19240 nsv508670 1 176460065 176491478 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620143 M 4 0 1 RASAL2 NA15510 esv2534493 1 176592506 176594067 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5191155 M 1 0 1 RASAL2 NA18507 nsv473443 1 176602713 176602713 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013020 M 9 1 0 RASAL2 NA19129 esv2606666 1 176639007 176640395 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5299571 M 1 0 1 RASAL2 NA18507 nsv946518 1 176643940 176647569 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807000,nssv1806955,nssv1806929,nssv1806963,nssv1806997,nssv1806964,nssv1806919,nssv1806977,nssv1806998,nssv1807008,nssv1806939,nssv1806948,nssv1806922,nssv1806972,nssv1806931,nssv1806941,nssv1806921,nssv1806949,nssv1806932,nssv1806989,nssv1806920,nssv1806987,nssv1806937,nssv1806952,nssv1806930,nssv1806967,nssv1807001,nssv1806988,nssv1806946,nssv1806978,nssv1806917,nssv1806983,nssv1806918,nssv1806974,nssv1806992,nssv1806984,nssv1806928,nssv1807007,nssv1806934,nssv1807011,nssv1806923,nssv1806969,nssv1806940,nssv1806975,nssv1806996,nssv1806973,nssv1806933,nssv1806976,nssv1806943,nssv1806979,nssv1806925,nssv1806970,nssv1806926,nssv1806968,nssv1806944,nssv1806981,nssv1806916,nssv1806971,nssv1806999,nssv1807003,nssv1806935,nssv1806959,nssv1806994,nssv1807002,nssv1806936,nssv1806957,nssv1806924,nssv1806954,nssv1806993,nssv1806951,nssv1806995,nssv1806961,nssv1806927,nssv1807009,nssv1806962,nssv1806991,nssv1806985,nssv1806950,nssv1807005,nssv1806990,nssv1806965,nssv1806980,nssv1807006,nssv1807010,nssv1806960,nssv1806938,nssv1806953,nssv1806947,nssv1806958,nssv1806982,nssv1806945,nssv1806986,nssv1806942,nssv1806956,nssv1806915,nssv1807004,nssv1806966 M 97 10 0 RASAL2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv29324 1 176715719 176747908 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18500 M 40 1 0 "" NA18508 nsv1009797 1 176725331 176748536 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489478 M 29084 1 0 "" nsv517431 1 176730214 176738117 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv654306,nssv661194,nssv673042,nssv688197,nssv688435,nssv652004,nssv669825,nssv688983,nssv683662,nssv687659,nssv670337,nssv656467,nssv689697,nssv664300,nssv669007,nssv660818,nssv656754,nssv681635,nssv690204,nssv661291,nssv664446,nssv652157,nssv683119,nssv678211,nssv684157,nssv688900,nssv655960,nssv678160,nssv665325,nssv703322,nssv663102,nssv689193 M 2026 0 32 "" nsv818600 1 176737488 176738117 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417819,nssv1417820 M 112 2 0 "" NA18852,NA18853 esv989446 1 176741360 176741423 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570054 M 3 0 1 "" HuRef esv1367119 1 176741515 176741579 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3852426 M 2 0 1 "" HuRef esv4587 1 176761860 176762603 CNV loss Wang_et_al_2008 18987735 Sequencing essv27028 M 1 0 1 "" YH nsv527862 1 176773217 176818095 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704360 M 2026 0 1 C1orf220 nsv160911 1 176821807 176827109 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179489 M 24 "" nsv474308 1 176850037 176850037 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010832 M 9 1 0 "" NA18507 nsv947454 1 176874383 176880790 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765527 M 97 1 0 "" HGDP00998 nsv548254 1 176875979 176932593 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729117 M 17421 1 0 MIR4424 nsv437255 1 176899996 176952870 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467136 M 60 0 1 MIR4424 NA19211 nsv466116 1 176904538 176924239 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541747 M 1557 0 1 MIR4424 1780854065_A nsv548255 1 176904538 176924239 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173917 M 17421 0 1 MIR4424 1780854065_A esv3337272 1 176910212 176910212 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863779 M 185 1 0 "" NA12005 nsv160394 1 176916511 176924899 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178972 M 24 "" esv2758980 1 176924205 176940697 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756871 M 270 0 3 "" NA19160,NA19210,NA19211 dgv468n100 1 176924504 176944254 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010585,nsv1015011,nsv1001516,nsv1010215,nsv1007983,nsv1013830,nsv997920,nsv1000546,nsv1001090,nsv1012914,nsv1006908,nsv1003074,nsv1012167,nsv1003965,nsv998394,nsv1010131,nsv1003228,nsv1009528 M 29084 0 47 "" nsv470747 1 176926033 176940697 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547787,nssv547793,nssv547790,nssv547791,nssv547792,nssv547788 M 443 0 6 "" HGDP00913,HGDP00919,HGDP00937,HGDP00943,HGDP01201,HGDP01415 dgv638n54 1 176926121 176943588 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548256,nsv548259,nsv548258,nsv548257 M 17421 0 8 "" HGDP00913,HGDP00943,HGDP01415 dgv44n27 1 176926556 176940697 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466195,nsv466160,nsv466184,nsv466127,nsv466138,nsv466173 M 1557 0 6 "" HGDP00913,HGDP00937,HGDP00943,NINDS_104,NINDS_125,NINDS_145 nsv515903 1 176926556 176940697 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv662753,nssv674823,nssv670036,nssv667909,nssv680460,nssv690430,nssv675249,nssv679183,nssv673771,nssv687019,nssv691413,nssv657974,nssv666332,nssv665216,nssv686573,nssv675619 M 2026 0 16 "" nsv818611 1 176926556 176940697 CNV loss Wang_et_al_2007 17921354 SNP array nssv1416700 M 112 0 1 "" NA19160 esv2764253 1 176926556 176943489 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006720,essv7006719,essv7006724,essv7006721,essv7006718,essv7006723 M 1109 0 6 "" RW_0022,RW_0061,RW_0091,RW_0227,RW_0262,RW_0503 nsv466149 1 176926556 176943588 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541765 M 1557 0 1 "" HGDP01415 nsv441721 1 176926933 176940811 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656812,nssv1656811,nssv1656810 M 270 0 3 "" NA19160,NA19210,NA19211 nsv548260 1 176928537 176936538 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729123 M 17421 0 1 "" dgv639n54 1 176928666 176940697 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548262,nsv548261,nsv548263 M 17421 0 4 "" HGDP00937,NINDS_104,NINDS_125,NINDS_145 nsv525444 1 176929484 177154186 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701572 M 2026 0 1 ANGPTL1,RALGPS2 nsv514020 1 176930992 176940688 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2851885,nssv2851881,nssv2851880,nssv2851879,nssv2851882,nssv2851883,nssv2851884 M 2366 0 7 "" NA18484,NA18488,NA19121,NA19123,NA19160,NA19210,NA19211 nsv548264 1 176932216 176939550 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729124 M 17421 0 1 "" nsv466206 1 176936294 177110517 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541816 M 1557 1 0 ANGPTL1,RALGPS2 HGDP00554 nsv548265 1 176936294 177110517 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173925 M 17421 1 0 ANGPTL1,RALGPS2 HGDP00554 nsv470748 1 176936294 177129888 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547794 M 443 1 0 ANGPTL1,RALGPS2 HGDP00554 nsv946519 1 176976385 176983420 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808016,nssv1808023,nssv1807949,nssv1808027,nssv1807021,nssv1807985,nssv1807016,nssv1807992,nssv1807948,nssv1808024,nssv1807951,nssv1807991,nssv1807957,nssv1808005,nssv1807958,nssv1807971,nssv1807019,nssv1808006,nssv1808019,nssv1808004,nssv1807017,nssv1807996,nssv1807965,nssv1808009,nssv1807953,nssv1807978,nssv1808020,nssv1807972,nssv1807967,nssv1807990,nssv1807954,nssv1807983,nssv1807964,nssv1807975,nssv1808018,nssv1807998,nssv1807014,nssv1808026,nssv1808021,nssv1808010,nssv1807956,nssv1807984,nssv1807015,nssv1807993,nssv1808015,nssv1807981,nssv1807960,nssv1808001,nssv1807018,nssv1808028,nssv1807961,nssv1807988,nssv1807950,nssv1807987,nssv1808022,nssv1807968,nssv1807022,nssv1807989,nssv1808017,nssv1808007,nssv1807955,nssv1807986,nssv1807020,nssv1807980,nssv1807952,nssv1807974,nssv1807023,nssv1808012,nssv1808013,nssv1808011,nssv1807013,nssv1808002,nssv1808014,nssv1808008,nssv1807994,nssv1808030,nssv1807969,nssv1808003,nssv1807977,nssv1807962,nssv1807966,nssv1807982,nssv1807012,nssv1807963,nssv1807999,nssv1808000,nssv1807979,nssv1808032,nssv1807959,nssv1808031,nssv1808025,nssv1807995,nssv1807970,nssv1807976,nssv1807997,nssv1808029,nssv1807973 M 97 10 0 RALGPS2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv825498 1 177043617 177046343 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436369 M 31 0 1 RALGPS2 NA18542 nsv947455 1 177057658 177087530 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2763703 M 97 1 0 ANGPTL1,RALGPS2 HGDP00998 nsv1005359 1 177084309 177133856 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494438,nssv3485799 M 29084 0 2 ANGPTL1,RALGPS2 nsv3710 1 177086998 177125524 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10378,nssv3540 M 9 2 0 ANGPTL1,RALGPS2 NA12878,NA18956 nsv1014249 1 177157408 177190871 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498892,nssv3704829 M 29084 2 0 RALGPS2 esv3372739 1 177214798 177214817 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9596969,essv9596936,essv9596947,essv9596958,essv9596925,essv9596980,essv9596991 M 185 7 0 "" NA07347,NA11881,NA11918,NA12043,NA12234,NA12287,NA12873 esv3890793 1 177216941 177234941 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25786761 M 3017 0 1 "" nsv528689 1 177216941 177234941 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705332 M 2026 0 1 "" nsv441722 1 177220369 177243352 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656814,nssv1656813 M 270 0 2 "" NA18562,NA18582 nsv825509 1 177229803 177242459 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423992 M 31 0 1 "" NA18582 esv29314 1 177244559 177246061 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12219 M 40 0 1 "" NA07037 dgv640n54 1 177244586 177245923 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548267,nsv548266,nsv548270,nsv548269,nsv548268 M 17421 0 17 "" dgv641n54 1 177244752 177245681 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548272,nsv548271 M 17421 0 2 "" dgv642n54 1 177244858 177245923 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548273,nsv548274 M 17421 0 4 "" nsv548275 1 177245032 177252281 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729148 M 17421 0 1 "" nsv548276 1 177245185 177245923 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729151,nssv729150,nssv729149 M 17421 0 3 "" nsv946520 1 177270824 177272463 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808119,nssv1808128,nssv1808041,nssv1808129,nssv1808062,nssv1808067,nssv1808042,nssv1808106,nssv1808116,nssv1808092,nssv1808038,nssv1808077,nssv1808055,nssv1808094,nssv1808050,nssv1808086,nssv1808036,nssv1808065,nssv1808035,nssv1808073,nssv1808046,nssv1808074,nssv1808054,nssv1808102,nssv1808051,nssv1808097,nssv1808061,nssv1808124,nssv1808117,nssv1808083,nssv1808039,nssv1808068,nssv1808044,nssv1808103,nssv1808037,nssv1808075,nssv1808118,nssv1808082,nssv1808040,nssv1808069,nssv1808064,nssv1808126,nssv1808043,nssv1808080,nssv1808053,nssv1808109,nssv1808112,nssv1808120,nssv1808115,nssv1808089,nssv1808048,nssv1808081,nssv1808058,nssv1808076,nssv1808110,nssv1808101,nssv1808057,nssv1808093,nssv1808052,nssv1808072,nssv1808049,nssv1808095,nssv1808034,nssv1808078,nssv1808114,nssv1808107,nssv1808047,nssv1808121,nssv1808111,nssv1808123,nssv1808045,nssv1808125,nssv1808113,nssv1808098,nssv1808090,nssv1808084,nssv1808099,nssv1808087,nssv1808104,nssv1808122,nssv1808127,nssv1808085,nssv1808105,nssv1808088,nssv1808060,nssv1808079,nssv1808100,nssv1808063,nssv1808108,nssv1808091,nssv1808066,nssv1808071,nssv1808096,nssv1808033,nssv1808070,nssv1808059,nssv1808056 M 97 10 0 FAM20B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3721 1 177286494 177329917 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4852,nssv7865 M 9 2 0 FAM20B,TOR3A NA12156,NA19129 esv6687 1 177332052 177332213 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29128 M 1 0 0 "" nsv1002511 1 177344537 177356465 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501539 M 29084 1 0 ABL2 dgv469n100 1 177361194 177387561 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012667,nsv1002253 M 29084 2 0 ABL2 nsv1001191 1 177363869 177387561 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484380 M 29084 0 1 ABL2 nsv1009493 1 177377146 177387702 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487250 M 29084 1 0 ABL2 dgv470n100 1 177383724 177395299 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011210,nsv1011462 M 29084 3 0 ABL2 nsv946521 1 177419827 177423015 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808138,nssv1807032,nssv1807076,nssv1807042,nssv1807078,nssv1808130,nssv1808132,nssv1807050,nssv1808135,nssv1807033,nssv1808147,nssv1807067,nssv1808136,nssv1807026,nssv1808152,nssv1807066,nssv1808143,nssv1807027,nssv1807072,nssv1807065,nssv1808151,nssv1807054,nssv1807079,nssv1807045,nssv1808148,nssv1807030,nssv1808158,nssv1807055,nssv1807075,nssv1807085,nssv1808137,nssv1807089,nssv1807024,nssv1807061,nssv1808159,nssv1807056,nssv1808150,nssv1807037,nssv1808133,nssv1807047,nssv1807074,nssv1807081,nssv1808145,nssv1807053,nssv1807070,nssv1807062,nssv1808142,nssv1807040,nssv1808146,nssv1807059,nssv1808139,nssv1807080,nssv1808154,nssv1807029,nssv1807077,nssv1807052,nssv1808131,nssv1807057,nssv1808149,nssv1807039,nssv1807071,nssv1807048,nssv1808155,nssv1807035,nssv1808144,nssv1807049,nssv1808134,nssv1807087,nssv1807073,nssv1808156,nssv1808141,nssv1807028,nssv1808140,nssv1807046,nssv1807083,nssv1807088,nssv1807051,nssv1807084,nssv1807041,nssv1807058,nssv1807036,nssv1807043,nssv1807069,nssv1807063,nssv1807086,nssv1807068,nssv1807031,nssv1808157,nssv1807064,nssv1807025,nssv1807044,nssv1807060,nssv1807038,nssv1808153,nssv1807034,nssv1807082,nssv1808160 M 97 10 0 ABL2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946522 1 177437035 177437664 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807094,nssv1807113,nssv1807173,nssv1807120,nssv1807105,nssv1807161,nssv1807112,nssv1807141,nssv1807097,nssv1807179,nssv1807092,nssv1807131,nssv1807095,nssv1807123,nssv1807110,nssv1807139,nssv1807106,nssv1807090,nssv1807175,nssv1807138,nssv1807096,nssv1807147,nssv1807104,nssv1807148,nssv1807121,nssv1807164,nssv1807176,nssv1807130,nssv1807093,nssv1807136,nssv1807172,nssv1807163,nssv1807119,nssv1807124,nssv1807168,nssv1807162,nssv1807118,nssv1807158,nssv1807109,nssv1807152,nssv1807103,nssv1807153,nssv1807111,nssv1807182,nssv1807169,nssv1807134,nssv1807114,nssv1807186,nssv1807171,nssv1807127,nssv1807167,nssv1807184,nssv1807108,nssv1807149,nssv1807115,nssv1807178,nssv1807099,nssv1807159,nssv1807107,nssv1807144,nssv1807100,nssv1807116,nssv1807174,nssv1807154,nssv1807098,nssv1807156,nssv1807091,nssv1807145,nssv1807170,nssv1807146,nssv1807102,nssv1807143,nssv1807101,nssv1807129,nssv1807142,nssv1807126,nssv1807177,nssv1807132,nssv1807150,nssv1807180,nssv1807183,nssv1807185,nssv1807160,nssv1807155,nssv1807125,nssv1807151,nssv1807181,nssv1807133,nssv1807128,nssv1807122,nssv1807165,nssv1807166,nssv1807137,nssv1807140,nssv1807135,nssv1807117,nssv1807157 M 97 10 0 ABL2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1005278 1 177464268 177638018 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490103 M 29084 1 0 ABL2,AXDND1,SOAT1 esv9286 1 177511282 177512932 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31727 M 1 0 0 "" esv990767 1 177536775 177544544 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565467 M 3 0 1 SOAT1 HuRef nsv523708 1 177558623 177560134 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699518 M 2026 0 1 SOAT1 nsv548277 1 177586491 177599817 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729152 M 17421 0 1 SOAT1 esv2762031 1 177590361 177641820 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7003289 M 1109 1 0 AXDND1,SOAT1 SW_1128 dgv643n54 1 177590542 177599817 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548278,nsv548280 M 17421 0 6 SOAT1 nsv518403 1 177590542 177638596 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695834 M 2026 1 0 AXDND1,SOAT1 nsv548279 1 177590542 177656771 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729155 M 17421 1 0 AXDND1,SOAT1 esv33901 1 177595331 177611528 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94675,essv94856,essv93067,essv101584,essv99451,essv92933,essv95895 M 51 0 7 AXDND1 21603,21791,21863,21911,21939,22231,22335 esv25985 1 177596451 177601717 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20900 M 40 0 9 AXDND1 NA06985,NA18502,NA18505,NA18517,NA18858,NA18861,NA18916,NA19129,NA19147 dgv644n54 1 177596522 177599817 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548290,nsv548288,nsv548287,nsv548291,nsv548281,nsv548283,nsv548282 M 17421 0 103 "" dgv645n54 1 177596522 177601557 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548294,nsv548296,nsv548292,nsv548284,nsv548285,nsv548289 M 17421 0 15 AXDND1 nsv514021 1 177596704 177599728 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2851963,nssv2851972,nssv2851989,nssv2851978,nssv2851906,nssv2851969,nssv2851901,nssv2852018,nssv2851894,nssv2851976,nssv2851932,nssv2851922,nssv2851931,nssv2851971,nssv2851967,nssv2851950,nssv2851929,nssv2851908,nssv2851917,nssv2851965,nssv2851935,nssv2852016,nssv2851904,nssv2851924,nssv2852015,nssv2851944,nssv2851926,nssv2852000,nssv2851964,nssv2851957,nssv2851937,nssv2852003,nssv2851918,nssv2851900,nssv2851921,nssv2851930,nssv2851893,nssv2851999,nssv2851927,nssv2851887,nssv2851956,nssv2851991,nssv2851946,nssv2851928,nssv2851899,nssv2851968,nssv2851938,nssv2852005,nssv2851890,nssv2851994,nssv2852010,nssv2851948,nssv2852008,nssv2851955,nssv2851995,nssv2851996,nssv2851923,nssv2851895,nssv2851985,nssv2851987,nssv2851886,nssv2851966,nssv2852002,nssv2851925,nssv2852013,nssv2851916,nssv2851892,nssv2851936,nssv2851897,nssv2851958,nssv2851945,nssv2851910,nssv2851973,nssv2851896,nssv2852007,nssv2851983,nssv2851981,nssv2851891,nssv2851962,nssv2851940,nssv2851934,nssv2852012,nssv2851990,nssv2851974,nssv2851943,nssv2851903,nssv2851961,nssv2851905,nssv2851992,nssv2851920,nssv2852001,nssv2851986,nssv2851913,nssv2851997,nssv2851914,nssv2851947,nssv2851959,nssv2851942,nssv2851888,nssv2852014,nssv2851941,nssv2852009,nssv2851975,nssv2851911,nssv2851998,nssv2851915,nssv2851902,nssv2852017,nssv2851951,nssv2851933,nssv2851952,nssv2851949,nssv2852004,nssv2851970,nssv2851953,nssv2851907,nssv2851954,nssv2851993,nssv2851919,nssv2851979,nssv2851984,nssv2852011,nssv2851939,nssv2851988,nssv2851912,nssv2851977,nssv2851960,nssv2851898,nssv2851980,nssv2851982,nssv2851889,nssv2852006,nssv2851909 M 2366 0 133 "" NA06985,NA06991,NA07051,NA10836,NA10837,NA10852,NA11995,NA12045,NA12154,NA12248,NA12273,NA12274,NA12740,NA12750,NA12763,NA12801,NA12812,NA12890,NA12891,NA18484,NA18485,NA18486,NA18487,NA18489,NA18500,NA18503,NA18504,NA18511,NA18516,NA18517,NA18518,NA18852,NA18855,NA18857,NA18859,NA18860,NA18861,NA18863,NA18871,NA18872,NA18873,NA18874,NA18908,NA18910,NA18911,NA18916,NA18917,NA18923,NA18925,NA18930,NA18934,NA19092,NA19094,NA19095,NA19097,NA19098,NA19100,NA19102,NA19103,NA19107,NA19113,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19128,NA19129,NA19137,NA19138,NA19144,NA19147,NA19148,NA19149,NA19150,NA19151,NA19171,NA19173,NA19174,NA19175,NA19178,NA19179,NA19180,NA19182,NA19183,NA19185,NA19193,NA19194,NA19207,NA19209,NA19210,NA19211,NA19214,NA19224,NA19235,NA19248,NA19249,NA21359,NA21361,NA21381,NA21383,NA21388,NA21389,NA21390,NA21391,NA21403,NA21404,NA21423,NA21425,NA21441,NA21453,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21513,NA21581,NA21600,NA21601,NA21635,NA21636,NA21648,NA21717 nsv548286 1 177596796 177598769 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729217,nssv729218 M 17421 0 2 "" esv2421575 1 177597151 177599938 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5143492,essv5160415,essv5113935,essv5094155,essv5081530,essv5052552,essv5119224,essv5102647,essv5015452,essv5125696,essv5112808,essv5032595,essv5011610,essv5150868,essv5025007,essv5108985,essv5044726,essv5132529,essv5084944,essv5117140,essv5101328,essv5045196,essv5081597,essv5016393,essv5091635,essv5117058,essv5055324,essv5075276,essv5073129,essv5039096,essv5152999,essv5061423,essv5035041,essv5011068,essv5043457,essv5092778,essv5146404,essv5052283,essv5089938,essv5147608,essv5128386,essv5015922,essv5143999,essv5143489,essv5047886,essv5023822,essv5017351,essv5034143,essv5156127,essv5024225,essv5056191,essv5141782,essv5155393,essv5015176,essv5084294,essv5079448,essv5026577,essv5137384,essv5108601,essv5153614,essv5059106,essv5118648,essv5069338,essv5138741,essv5140913,essv5011496,essv5155816,essv5147970,essv5064408,essv5086790,essv5060628,essv5124667,essv5093453,essv5049378,essv5065579,essv5012124,essv5117276,essv5138135,essv5084128,essv5060427,essv5035268,essv5102561,essv5028253,essv5061604,essv5105493,essv5048091,essv5117467,essv5054363,essv5141928,essv5120205,essv5086366,essv5127812,essv5103780,essv5038185,essv5150759,essv5017274,essv5037505,essv5066285,essv5019515,essv5029551,essv5115377,essv5135568,essv5039169,essv5032490,essv5085733,essv5109370,essv5069744,essv5088133,essv5026376,essv5099915,essv5104543,essv5086210,essv5034608,essv5052840,essv5121247,essv5115646,essv5135658,essv5059872,essv5068994,essv5057757,essv5151712,essv5145049,essv5049593,essv5071583,essv5052133,essv5083278,essv5150220,essv5079260,essv5130177,essv5060071,essv5011412,essv5059208,essv5039072,essv5026688,essv5074785,essv5115524,essv5135829,essv5124864,essv5005153,essv5006400,essv5157369,essv5139061,essv5134099,essv5087925,essv5034949,essv5151661,essv5007755,essv5153627,essv5097011,essv5098562,essv5021192,essv5072419,essv5143258,essv5076145,essv5070718,essv5025520,essv5084874,essv5137274,essv5131880,essv5057444,essv5012644,essv5140504,essv5121839,essv5114594,essv5140330,essv5095789,essv5007569,essv5048220,essv5023583,essv5003116,essv5100318,essv5054255,essv5091830,essv5043027,essv5078078,essv5159888,essv5077289,essv5004051,essv5059018,essv5114759,essv5018748,essv5053914,essv5104072,essv5076580,essv5052316,essv5056095,essv5030760,essv5010065,essv5142615,essv5042563,essv5036858,essv5080535,essv5026969,essv5033416,essv5066395,essv5137567,essv5076884,essv5062635,essv5094745,essv5108482,essv5145007,essv5129974,essv5038782,essv5135011,essv5069172,essv5148066,essv5051426,essv5011182,essv5015278,essv5123420,essv5059944,essv5075018,essv5036595,essv5057905,essv5112644,essv5107704,essv5156123,essv5059085,essv5058548,essv5081111,essv5160593,essv5041001,essv5050966,essv5091383,essv5060875,essv5101784,essv5101377,essv5022571,essv5059797,essv5084884,essv5013412,essv5013241,essv5020099,essv5013710,essv5073615,essv5153952 M 1184 0 236 "" NA06985,NA06991,NA07051,NA10836,NA10837,NA10852,NA10853,NA10861,NA11995,NA12045,NA12154,NA12248,NA12273,NA12740,NA12750,NA12763,NA12801,NA12812,NA12890,NA12891,NA18484,NA18485,NA18486,NA18487,NA18489,NA18500,NA18503,NA18504,NA18505,NA18511,NA18515,NA18516,NA18517,NA18520,NA18852,NA18855,NA18857,NA18858,NA18859,NA18860,NA18861,NA18863,NA18871,NA18872,NA18873,NA18874,NA18910,NA18911,NA18916,NA18917,NA18923,NA18925,NA18930,NA18934,NA19027,NA19028,NA19035,NA19094,NA19095,NA19097,NA19098,NA19102,NA19103,NA19107,NA19113,NA19116,NA19117,NA19119,NA19120,NA19128,NA19129,NA19137,NA19138,NA19139,NA19144,NA19147,NA19148,NA19149,NA19150,NA19151,NA19171,NA19173,NA19174,NA19175,NA19178,NA19179,NA19180,NA19182,NA19183,NA19185,NA19193,NA19194,NA19207,NA19209,NA19210,NA19211,NA19213,NA19214,NA19215,NA19224,NA19226,NA19235,NA19248,NA19311,NA19313,NA19319,NA19328,NA19360,NA19375,NA19376,NA19379,NA19381,NA19390,NA19393,NA19396,NA19397,NA19398,NA19403,NA19428,NA19429,NA19437,NA19438,NA19439,NA19444,NA19452,NA19457,NA19462,NA19466,NA19467,NA19468,NA19469,NA19472,NA19473,NA19656,NA19657,NA19659,NA19713,NA19716,NA19784,NA19818,NA19828,NA19900,NA19901,NA19902,NA19904,NA19908,NA19909,NA19914,NA19915,NA19916,NA19918,NA19921,NA19983,NA19985,NA20279,NA20281,NA20287,NA20292,NA20294,NA20317,NA20335,NA20340,NA20341,NA20345,NA20346,NA20347,NA20348,NA20349,NA20350,NA20356,NA20504,NA20508,NA20524,NA20770,NA20819,NA20895,NA21123,NA21125,NA21333,NA21339,NA21355,NA21356,NA21357,NA21359,NA21361,NA21378,NA21379,NA21381,NA21383,NA21388,NA21389,NA21390,NA21391,NA21402,NA21403,NA21404,NA21405,NA21423,NA21424,NA21425,NA21441,NA21448,NA21451,NA21453,NA21473,NA21475,NA21476,NA21478,NA21479,NA21480,NA21485,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21509,NA21513,NA21517,NA21529,NA21573,NA21576,NA21577,NA21597,NA21600,NA21601,NA21631,NA21635,NA21647,NA21648,NA21685,NA21693,NA21717,NA21723,NA21776 nsv442505 1 177597151 177599938 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619186,nssv1619174,nssv1619180,nssv1619148,nssv1619191,nssv1619187,nssv1619179,nssv1619149,nssv1619165,nssv1619173,nssv1619152,nssv1619169,nssv1619155,nssv1619150,nssv1619192,nssv1619182,nssv1619145,nssv1619178,nssv1619193,nssv1619154,nssv1619185,nssv1619161,nssv1619159,nssv1619176,nssv1619177,nssv1619158,nssv1619141,nssv1619183,nssv1619172,nssv1619147,nssv1619157,nssv1619168,nssv1619184,nssv1619160,nssv1619144,nssv1619171,nssv1619143,nssv1619189,nssv1619153,nssv1619162,nssv1619167,nssv1619170,nssv1619188,nssv1619181,nssv1619151,nssv1619163,nssv1619164,nssv1619146,nssv1619175,nssv1619142,nssv1619166,nssv1619190,nssv1619156 M 270 0 53 "" NA06985,NA06991,NA10861,NA11995,NA12154,NA12248,NA12740,NA12750,NA12763,NA12801,NA12812,NA12891,NA18500,NA18502,NA18503,NA18504,NA18505,NA18515,NA18516,NA18517,NA18852,NA18855,NA18857,NA18858,NA18859,NA18860,NA18861,NA18863,NA18871,NA18872,NA19092,NA19094,NA19098,NA19100,NA19102,NA19103,NA19116,NA19119,NA19120,NA19128,NA19129,NA19137,NA19138,NA19139,NA19144,NA19171,NA19173,NA19193,NA19194,NA19207,NA19209,NA19210,NA19211 dgv646n54 1 177597555 177599817 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548293,nsv548295 M 17421 0 42 "" nsv523087 1 177619359 177638596 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698779 M 2026 1 0 AXDND1 nsv548297 1 177638596 177744544 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729322 M 17421 0 1 AXDND1 nsv548298 1 177643519 177702911 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729324,nssv729323 M 17421 0 2 AXDND1 nsv946523 1 177683872 177693012 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807266,nssv1807244,nssv1807193,nssv1807279,nssv1807269,nssv1807261,nssv1807191,nssv1807280,nssv1807270,nssv1807249,nssv1807194,nssv1807232,nssv1807192,nssv1807276,nssv1807204,nssv1807228,nssv1807203,nssv1807239,nssv1807265,nssv1807258,nssv1807207,nssv1807234,nssv1807272,nssv1807220,nssv1807190,nssv1807263,nssv1807202,nssv1807235,nssv1807201,nssv1807225,nssv1807209,nssv1807210,nssv1807196,nssv1807217,nssv1807215,nssv1807187,nssv1807206,nssv1807260,nssv1807211,nssv1807233,nssv1807197,nssv1807227,nssv1807200,nssv1807236,nssv1807268,nssv1807259,nssv1807264,nssv1807245,nssv1807205,nssv1807255,nssv1807212,nssv1807275,nssv1807189,nssv1807219,nssv1807218,nssv1807248,nssv1807208,nssv1807251,nssv1807198,nssv1807283,nssv1807273,nssv1807213,nssv1807195,nssv1807230,nssv1807271,nssv1807256,nssv1807199,nssv1807250,nssv1807188,nssv1807246,nssv1807216,nssv1807242,nssv1807267,nssv1807253,nssv1807274,nssv1807224,nssv1807231,nssv1807281,nssv1807221,nssv1807237,nssv1807223,nssv1807229,nssv1807241,nssv1807243,nssv1807240,nssv1807247,nssv1807277,nssv1807282,nssv1807238,nssv1807226,nssv1807214,nssv1807252,nssv1807278,nssv1807257,nssv1807262,nssv1807222,nssv1807254 M 97 10 0 AXDND1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv471n100 1 177689686 177726299 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011557,nsv1009624 M 29084 0 2 AXDND1 dgv647n54 1 177719318 177724059 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548299,nsv548300 M 17421 0 4 AXDND1 esv21515 1 177722257 177724955 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11393 M 40 0 3 AXDND1 NA11995,NA18511,NA19190 dgv648n54 1 177722268 177723747 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548301,nsv548302,nsv548303,nsv548311 M 17421 0 8 AXDND1 dgv649n54 1 177722268 177724059 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548304,nsv548305,nsv548313,nsv548312,nsv548317,nsv548316 M 17421 0 10 AXDND1 dgv650n54 1 177722268 177724828 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548308,nsv548307,nsv548306,nsv548309,nsv548314,nsv548310,nsv548315 M 17421 0 11 AXDND1 dgv651n54 1 177722669 177724828 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548320,nsv548319,nsv548318,nsv548321 M 17421 0 6 AXDND1 dgv652n54 1 177722669 177726177 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548328,nsv548322,nsv548327 M 17421 0 3 AXDND1 dgv653n54 1 177722982 177724355 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548324,nsv548329,nsv548323,nsv548325 M 17421 0 7 AXDND1 nsv548326 1 177722982 177724828 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729374,nssv729373,nssv729372,nssv729371,nssv729375 M 17421 0 5 AXDND1 nsv548330 1 177723435 177724828 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729379 M 17421 1 0 AXDND1 esv25164 1 177734262 177736379 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15822 M 40 0 1 AXDND1 NA11993 nsv548331 1 177734286 177735876 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729380 M 17421 0 1 AXDND1 dgv654n54 1 177734537 177736116 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548334,nsv548333,nsv548332 M 17421 0 5 AXDND1 esv2428003 1 177757972 177759061 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5374758 M 1 1 0 AXDND1 NA18507 esv3304296 1 177758577 177758578 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7802644,essv7822955,essv7835269,essv7814509,essv7803147,essv7779437,essv7776011,essv7810108,essv7819341,essv7830643,essv7777330,essv7810460,essv7774424,essv7781667,essv7785135,essv7823190,essv7801801,essv7804064,essv7773996,essv7791737,essv7795844,essv7829138,essv7818478,essv7778240,essv7793674,essv7812764,essv7819586,essv7786512,essv7774582,essv7796729,essv7785073,essv7798400,essv7801485,essv7821506,essv7782790,essv7780814,essv7815081,essv7817793,essv7824215,essv7780699,essv7823782,essv7808129,essv7808999,essv7822359,essv7816908,essv7803449,essv7791231,essv7811958,essv7783144,essv7826593,essv7818820,essv7815505,essv7770802,essv7821044 M 185 54 0 AXDND1 NA07037,NA07051,NA07347,NA07357,NA10847,NA11918,NA11919,NA11931,NA12004,NA12043,NA12045,NA12287,NA12717,NA12749,NA12776,NA12812,NA12815,NA12873,NA12874,NA18501,NA18507,NA18526,NA18532,NA18537,NA18547,NA18552,NA18558,NA18562,NA18564,NA18570,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18593,NA18603,NA18605,NA18638,NA18853,NA18907,NA18943,NA18945,NA18948,NA18949,NA18953,NA18959,NA18964,NA18965,NA18973,NA19005,NA19108,NA19225 nsv522746 1 177767988 177785082 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698381 M 2026 0 1 AXDND1 nsv523253 1 177782695 177785082 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698982 M 2026 0 1 AXDND1 nsv3732 1 177820617 177852711 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2715,nssv349 M 9 2 0 TDRD5 NA18555,NA19240 nsv946524 1 177825483 177826593 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1807293,nssv1809207,nssv1807288,nssv1809197,nssv1809216,nssv1807323,nssv1809212,nssv1807316,nssv1807304,nssv1809188,nssv1807303,nssv1807320,nssv1807289,nssv1809182,nssv1807291,nssv1809185,nssv1807285,nssv1807322,nssv1807301,nssv1809190,nssv1807297,nssv1807319,nssv1807300,nssv1807327,nssv1809217,nssv1807329,nssv1807294,nssv1807325,nssv1807298,nssv1807317,nssv1807306,nssv1807314,nssv1809210,nssv1807331,nssv1809215,nssv1809187,nssv1809209,nssv1809186,nssv1807299,nssv1809228,nssv1807312,nssv1807284,nssv1809213,nssv1809225,nssv1809214,nssv1807307,nssv1807308,nssv1809227,nssv1807286,nssv1809205,nssv1807296,nssv1807324,nssv1807305,nssv1809201,nssv1807302,nssv1809198,nssv1809211,nssv1807330,nssv1809218,nssv1809202,nssv1807315,nssv1809208,nssv1807313,nssv1809226,nssv1807292,nssv1809180,nssv1807295,nssv1809222,nssv1807309,nssv1809189,nssv1807290,nssv1809184,nssv1807287,nssv1807311,nssv1809191,nssv1809196,nssv1807318,nssv1809219,nssv1809204,nssv1809223,nssv1807328,nssv1809220,nssv1809195,nssv1809194,nssv1809192,nssv1807321,nssv1809206,nssv1807326,nssv1807310,nssv1809181,nssv1809200,nssv1809221,nssv1809193,nssv1809224,nssv1809203,nssv1809199,nssv1809183 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3414091 1 177851535 177851550 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863780 M 185 1 0 TDRD5 NA12005 nsv1013000 1 177855816 177895159 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493992 M 29084 1 0 TDRD5 nsv511147 1 177872780 177875084 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625935 M 1 0 1 TDRD5 1 nsv511720 1 177873483 177875317 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626362 M 1 0 1 TDRD5 1 esv2544242 1 177873573 177875028 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5359125 M 1 0 1 TDRD5 NA18507 esv2244958 1 177873752 177874852 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4965229 M 1 0 1 TDRD5 NA18507 esv5000 1 177873868 177874770 CNV loss Wang_et_al_2008 18987735 Sequencing essv27441 M 1 0 1 TDRD5 YH esv23404 1 177873980 177874648 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20879 M 40 15 3 TDRD5 NA06985,NA11894,NA11995,NA12004,NA12006,NA12287,NA12828,NA12878,NA18511,NA18523,NA18861,NA18907,NA19099,NA19114,NA19147,NA19190,NA19240,NA19257 esv997488 1 177873980 177874648 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586361 M 3 1 0 TDRD5 HuRef nsv821315 1 177873980 177874648 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420769 M 1 0 1 TDRD5 NA10851 dgv655n54 1 177874005 177874559 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548335,nsv548337,nsv548336 M 17421 0 298 TDRD5 nsv548338 1 177874056 177875084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729684 M 17421 0 1 TDRD5 nsv475609 1 177905968 177905968 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020341 M 9 1 0 TDRD5 NA12878 esv2598318 1 177917335 177917932 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5231502 M 1 1 0 TDRD5 NA18507 esv3417628 1 177917382 177917752 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808934 M 185 1 0 TDRD5 NA12878 nsv512751 1 177917638 177918008 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625380 M 1 1 0 TDRD5 1 nsv548339 1 177952867 177989450 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173926 M 17421 1 0 FAM163A HGDP01042 dgv472n100 1 177980870 178066053 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009961,nsv1011407 M 29084 2 0 FAM163A esv2552928 1 177987063 177988548 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5194999 M 1 0 1 FAM163A NA18507 esv33942 1 177989461 177990945 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94149 M 51 0 1 FAM163A 22394 dgv19n21 1 178028224 178062128 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv520418,nsv519307 M 2026 0 2 FAM163A nsv522044 1 178032709 178032795 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694814 M 2026 0 1 FAM163A dgv473n100 1 178050545 178131333 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005051,nsv1005808 M 29084 2 0 FAM163A,TOR1AIP1,TOR1AIP2 esv2568232 1 178089041 178090323 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5375273 M 1 0 1 TOR1AIP2 NA18507 nsv528201 1 178097871 178099266 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704761 M 2026 0 1 TOR1AIP2 nsv519273 1 178097871 178114500 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696760 M 2026 0 1 TOR1AIP2 nsv518936 1 178114025 178124956 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696401 M 2026 1 0 TOR1AIP1 nsv3744 1 178147298 178177918 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4866 M 9 1 0 TOR1AIP1 NA19129 nsv474944 1 178175042 178175042 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020058 M 9 1 0 "" NA18956 nsv946526 1 178202950 178205278 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809237,nssv1809255,nssv1809313,nssv1809275,nssv1809309,nssv1809290,nssv1809235,nssv1809278,nssv1809250,nssv1809298,nssv1809307,nssv1809300,nssv1809310,nssv1809272,nssv1809234,nssv1809321,nssv1809241,nssv1809285,nssv1809246,nssv1809274,nssv1809311,nssv1809280,nssv1809260,nssv1809265,nssv1809244,nssv1809304,nssv1809312,nssv1809283,nssv1809314,nssv1809282,nssv1809232,nssv1809263,nssv1809257,nssv1809259,nssv1809243,nssv1809279,nssv1809306,nssv1809281,nssv1809242,nssv1809264,nssv1809251,nssv1809287,nssv1809231,nssv1809269,nssv1809248,nssv1809295,nssv1809249,nssv1809262,nssv1809308,nssv1809296,nssv1809238,nssv1809324,nssv1809247,nssv1809284,nssv1809240,nssv1809266,nssv1809254,nssv1809294,nssv1809245,nssv1809319,nssv1809230,nssv1809323,nssv1809258,nssv1809270,nssv1809239,nssv1809325,nssv1809236,nssv1809267,nssv1809315,nssv1809305,nssv1809253,nssv1809299,nssv1809233,nssv1809302,nssv1809273,nssv1809317,nssv1809316,nssv1809320,nssv1809288,nssv1809252,nssv1809289,nssv1809268,nssv1809261,nssv1809271,nssv1809276,nssv1809322,nssv1809301,nssv1809318,nssv1809303,nssv1809291,nssv1809293,nssv1809286,nssv1809297,nssv1809277,nssv1809292,nssv1809256,nssv1809229 M 97 10 0 CEP350 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv466228 1 178211524 178334611 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541832 M 1557 0 1 CEP350 HGDP00766 dgv656n54 1 178211524 178338610 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548343,nsv548342,nsv548341,nsv548340,nsv548344 M 17421 0 9 CEP350 HGDP00766 nsv520322 1 178211524 178338610 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv692308,nssv662917,nssv689825 M 2026 0 3 CEP350 nsv520278 1 178212013 178359689 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697322 M 2026 1 0 CEP350 nsv478740 1 178261898 178261898 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019614 M 9 1 0 CEP350 NA18507 nsv3755 1 178265483 178310177 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7871 M 9 0 1 CEP350 NA12156 nsv1000698 1 178266292 178309144 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500795 M 29084 0 1 CEP350 dgv474n100 1 178388103 178509282 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002133,nsv1012145,nsv1005512,nsv1007590,nsv999182,nsv999104 M 29084 6 0 FLJ23867,LHX4,LOC100527964,QSOX1 dgv475n100 1 178392289 178446679 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000781,nsv1011933,nsv1009958,nsv1001540,nsv1014345,nsv1009112,nsv1008644,nsv1006153 M 29084 21 0 FLJ23867,QSOX1 dgv476n100 1 178393061 178467727 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001909,nsv1005030,nsv1011191,nsv1002768,nsv1011134,nsv1004421,nsv1013314,nsv1007334,nsv1007515,nsv1012816,nsv999247,nsv1000954 M 29084 28 0 FLJ23867,LHX4,QSOX1 nsv832004 1 178395125 178602163 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441532,nssv1441531,nssv1441526,nssv1441527,nssv1441529,nssv1441528 M 95 6 0 ACBD6,FLJ23867,LHX4,LOC100527964,QSOX1 nsv1001565 1 178403664 178437147 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500891 M 29084 0 1 FLJ23867,QSOX1 nsv466239 1 178412601 178535099 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541841 M 1557 1 0 ACBD6,FLJ23867,LHX4,LOC100527964,QSOX1 NINDS_23 nsv548345 1 178412601 178535099 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173928 M 17421 1 0 ACBD6,FLJ23867,LHX4,LOC100527964,QSOX1 NINDS_23 nsv522045 1 178418865 178426277 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694815 M 2026 0 1 QSOX1 nsv528041 1 178421399 178430013 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704573 M 2026 0 1 QSOX1 nsv472946 1 178428839 178428839 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018882 M 9 1 0 QSOX1 NA19129 esv2462320 1 178449541 178451203 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5323906 M 1 0 1 "" NA18507 esv3588 1 178450118 178450866 CNV loss Wang_et_al_2008 18987735 Sequencing essv26029 M 1 0 1 "" YH esv8585 1 178450183 178450900 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31026 M 1 0 0 "" esv2524868 1 178450459 178450777 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5243051 M 1 0 1 "" NA18507 esv1000645 1 178450465 178450783 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579785 M 3 0 1 "" HuRef esv1784268 1 178450469 178450788 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3675982 M 2 0 1 "" HuRef esv23910 1 178465275 178467516 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14202 M 40 0 1 LHX4 NA12156 nsv1013076 1 178480775 178506293 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494082 M 29084 1 0 LHX4,LOC100527964 esv29505 1 178495181 178497081 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17575 M 40 0 1 LHX4 NA18907 nsv946527 1 178496191 178498279 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809345,nssv1809359,nssv1808482,nssv1808474,nssv1809357,nssv1809362,nssv1809334,nssv1808465,nssv1809338,nssv1808469,nssv1809335,nssv1809349,nssv1809355,nssv1809383,nssv1808485,nssv1809374,nssv1809340,nssv1809352,nssv1809331,nssv1809365,nssv1809343,nssv1808477,nssv1808486,nssv1808467,nssv1808479,nssv1808476,nssv1809341,nssv1809375,nssv1809339,nssv1809326,nssv1809329,nssv1808491,nssv1809354,nssv1809387,nssv1809348,nssv1809377,nssv1808481,nssv1809356,nssv1809332,nssv1809369,nssv1809347,nssv1809382,nssv1809346,nssv1809371,nssv1808487,nssv1808468,nssv1809344,nssv1809388,nssv1808483,nssv1809372,nssv1809351,nssv1809376,nssv1809336,nssv1809378,nssv1809333,nssv1809361,nssv1808480,nssv1809379,nssv1809342,nssv1809381,nssv1809327,nssv1809353,nssv1809328,nssv1808492,nssv1808488,nssv1808497,nssv1809350,nssv1809366,nssv1809330,nssv1809384,nssv1808484,nssv1808496,nssv1809337,nssv1809363,nssv1808466,nssv1808475,nssv1808471,nssv1808498,nssv1809380,nssv1808472,nssv1809367,nssv1809360,nssv1808493,nssv1808478,nssv1808495,nssv1808490,nssv1808473,nssv1808489,nssv1809386,nssv1809385,nssv1808470,nssv1809370,nssv1809373,nssv1809364,nssv1809368,nssv1809358,nssv1808494 M 97 10 0 LHX4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2650355 1 178542949 178544284 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5387757 M 1 0 1 ACBD6 NA18507 nsv527918 1 178546333 178710431 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704424 M 2026 1 0 ACBD6,MIR3121 nsv477185 1 178550658 178550658 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011711 M 9 1 0 ACBD6 NA18517 esv6088 1 178559330 178560191 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28529 M 1 0 0 ACBD6 esv2576257 1 178559377 178561270 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5264703 M 1 0 1 ACBD6 NA18507 esv2136642 1 178559446 178560135 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4689488 M 1 0 1 ACBD6 NA18507 esv1001564 1 178559521 178560497 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565328 M 3 0 1 ACBD6 HuRef esv5032 1 178559576 178559997 CNV loss Wang_et_al_2008 18987735 Sequencing essv27473 M 1 0 1 ACBD6 YH esv1123070 1 178559627 178559951 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3850999 M 2 0 1 ACBD6 HuRef esv2762200 1 178567559 178760464 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006725 M 1109 1 0 ACBD6,MIR3121 RW_0094 nsv1003359 1 178567559 178994184 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704830 M 29084 1 0 ACBD6,MIR3121,XPR1 nsv1009742 1 178608826 178652082 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489416 M 29084 0 1 ACBD6 nsv1014937 1 178627523 178666178 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498236 M 29084 0 1 ACBD6 nsv476151 1 178635707 178635707 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017860 M 9 1 0 ACBD6 NA12878 nsv3766 1 178650579 178676883 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv358 M 9 1 0 ACBD6,MIR3121 NA19240 nsv946528 1 178667044 178672464 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808524,nssv1809494,nssv1809507,nssv1808560,nssv1808507,nssv1809490,nssv1808519,nssv1809516,nssv1808517,nssv1808555,nssv1808504,nssv1808531,nssv1808509,nssv1808551,nssv1808516,nssv1808552,nssv1808508,nssv1808544,nssv1808521,nssv1809512,nssv1809506,nssv1808557,nssv1808512,nssv1809497,nssv1808510,nssv1808526,nssv1808527,nssv1808525,nssv1809508,nssv1808537,nssv1809501,nssv1808532,nssv1808503,nssv1808529,nssv1809509,nssv1808554,nssv1808502,nssv1809515,nssv1808514,nssv1808522,nssv1808530,nssv1808542,nssv1808501,nssv1808553,nssv1809504,nssv1808499,nssv1809503,nssv1809491,nssv1809502,nssv1808561,nssv1808506,nssv1808558,nssv1808515,nssv1808534,nssv1808500,nssv1808545,nssv1809500,nssv1809498,nssv1808511,nssv1809488,nssv1808518,nssv1809489,nssv1808523,nssv1808535,nssv1808520,nssv1809495,nssv1809505,nssv1808549,nssv1808505,nssv1808562,nssv1808528,nssv1808536,nssv1808513,nssv1808559,nssv1808546,nssv1808540,nssv1808563,nssv1808533,nssv1808541,nssv1809496,nssv1809518,nssv1809511,nssv1808539,nssv1808548,nssv1809492,nssv1809517,nssv1808547,nssv1809514,nssv1808556,nssv1809513,nssv1809510,nssv1809499,nssv1808550,nssv1808538,nssv1809493,nssv1808543,nssv1809519 M 97 10 0 ACBD6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3418794 1 178822764 178822788 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863781 M 185 1 0 "" NA12005 nsv825520 1 178829300 178831410 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1427293 M 31 0 1 "" AK8 esv1216422 1 178892203 178892203 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4339051 M 2 1 0 XPR1 HuRef esv988017 1 178897271 178906075 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565500 M 3 0 1 XPR1 HuRef esv3890804 1 178939415 179278851 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25787833 M 3017 1 0 KIAA1614,MR1,STX6,XPR1 esv3397949 1 178960354 178960380 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8901938,essv8901937 M 185 2 0 XPR1 NA18508,NA19147 esv3303550 1 178960365 178960366 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7745510,essv7759292 M 185 2 0 XPR1 NA18508,NA19147 nsv3777 1 179007836 179046936 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3551,nssv7149 M 9 0 2 XPR1 NA12156,NA12878 nsv548346 1 179013656 179021944 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729693 M 17421 0 1 XPR1 nsv498695 1 179016391 179022021 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585409 M 9 0 1 XPR1 esv22705 1 179017029 179022129 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20795 M 40 0 2 XPR1 NA12156,NA12878 dgv657n54 1 179017104 179021944 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548353,nsv548351,nsv548349,nsv548347,nsv548348,nsv548352,nsv548350,nsv548354 M 17421 0 36 XPR1 nsv548355 1 179019248 179021944 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729734,nssv729733,nssv729730,nssv729732,nssv729731 M 17421 0 5 XPR1 esv1112679 1 179094827 179094827 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4360551 M 2 1 0 XPR1 HuRef esv3439699 1 179094827 179094827 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825022 M 185 1 0 XPR1 NA19240 nsv159447 1 179094827 179094827 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178025 M 24 XPR1 esv2452119 1 179123667 179124801 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5342697 M 1 1 0 XPR1 NA18507 nsv1001918 1 179153373 179174628 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483176 M 29084 0 1 KIAA1614 esv3359336 1 179223952 179224850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692078 M 185 1 0 STX6 NA19239 nsv508051 1 179259062 179265062 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621483 M 4 0 0 "" NA15510 esv993520 1 179280817 179294814 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563746 M 3 0 1 MR1 HuRef nsv946529 1 179284549 179286346 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809539,nssv1809546,nssv1809526,nssv1809608,nssv1809529,nssv1809520,nssv1809530,nssv1809550,nssv1809604,nssv1809579,nssv1809528,nssv1809611,nssv1809600,nssv1809552,nssv1809545,nssv1809590,nssv1809525,nssv1809567,nssv1809602,nssv1809564,nssv1809522,nssv1809562,nssv1809537,nssv1809577,nssv1809605,nssv1809580,nssv1809603,nssv1809613,nssv1809601,nssv1809584,nssv1809524,nssv1809609,nssv1809548,nssv1809547,nssv1809606,nssv1809616,nssv1809597,nssv1809543,nssv1809527,nssv1809583,nssv1809541,nssv1809594,nssv1809534,nssv1809592,nssv1809535,nssv1809559,nssv1809532,nssv1809558,nssv1809542,nssv1809556,nssv1809533,nssv1809563,nssv1809540,nssv1809568,nssv1809538,nssv1809612,nssv1809599,nssv1809569,nssv1809531,nssv1809581,nssv1809551,nssv1809591,nssv1809549,nssv1809571,nssv1809536,nssv1809553,nssv1809521,nssv1809555,nssv1809598,nssv1809586,nssv1809523,nssv1809595,nssv1809544,nssv1809588,nssv1809573,nssv1809557,nssv1809585,nssv1809566,nssv1809582,nssv1809578,nssv1809565,nssv1809572,nssv1809576,nssv1809589,nssv1809570,nssv1809614,nssv1809574,nssv1809554,nssv1809560,nssv1809593,nssv1809587,nssv1809615,nssv1809575,nssv1809607,nssv1809561,nssv1809610,nssv1809596 M 97 10 0 MR1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv819813 1 179286370 179286933 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419005 M 2 0 1 MR1 AK1 esv2644663 1 179309556 179311409 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5230839 M 1 0 1 "" NA18507 esv3345658 1 179314037 179314047 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673815,essv8673811,essv8673814,essv8673812,essv8673813 M 185 5 0 "" NA12878,NA12891,NA19238,NA19239,NA19240 esv22385 1 179324305 179325937 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16186 M 40 0 1 IER5 NA12156 nsv548356 1 179324310 179325163 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729735 M 17421 0 1 IER5 nsv548357 1 179324637 179327414 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729736 M 17421 1 0 IER5 nsv1007439 1 179370632 179404443 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493454 M 29084 1 0 "" esv1148016 1 179372629 179372629 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4141015 M 2 1 0 "" HuRef nsv521968 1 179398342 179399898 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694736 M 2026 1 0 "" esv26294 1 179413660 179480328 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10871 M 40 2 0 GM140 NA18858,NA19257 nsv1009031 1 179424470 179463900 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502468 M 29084 1 0 "" nsv1008826 1 179438391 179468497 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502275 M 29084 1 0 "" nsv3788 1 179571497 179605959 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv364 M 9 1 0 "" NA19240 esv3389638 1 179574264 179574276 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863783 M 185 1 0 "" NA12005 nsv527166 1 179576023 179577104 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703560 M 2026 0 1 "" nsv473144 1 179579352 179579352 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013702 M 9 1 0 "" NA19129 nsv528924 1 179625030 179635420 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705614 M 2026 0 1 "" esv275129 1 179644152 179646278 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585131 M 1250 0 1 "" nsv508052 1 179652225 179658225 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621484 M 4 0 0 "" NA15510 nsv946530 1 179658616 179659927 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809636,nssv1809653,nssv1809648,nssv1809704,nssv1809625,nssv1809690,nssv1809622,nssv1809693,nssv1809623,nssv1809649,nssv1809624,nssv1809684,nssv1809646,nssv1809655,nssv1809703,nssv1809659,nssv1809694,nssv1809676,nssv1809697,nssv1809708,nssv1809619,nssv1809657,nssv1809701,nssv1809687,nssv1809638,nssv1809705,nssv1809700,nssv1809677,nssv1809632,nssv1809664,nssv1809642,nssv1809661,nssv1809699,nssv1809710,nssv1809645,nssv1809644,nssv1809631,nssv1809686,nssv1809695,nssv1809713,nssv1809630,nssv1809658,nssv1809639,nssv1809680,nssv1809627,nssv1809643,nssv1809698,nssv1809681,nssv1809620,nssv1809706,nssv1809702,nssv1809640,nssv1809626,nssv1809691,nssv1809696,nssv1809674,nssv1809629,nssv1809656,nssv1809637,nssv1809651,nssv1809635,nssv1809692,nssv1809628,nssv1809709,nssv1809633,nssv1809689,nssv1809618,nssv1809678,nssv1809634,nssv1809707,nssv1809621,nssv1809665,nssv1809641,nssv1809617,nssv1809668,nssv1809660,nssv1809666,nssv1809647,nssv1809663,nssv1809671,nssv1809688,nssv1809669,nssv1809673,nssv1809652,nssv1809670,nssv1809679,nssv1809662,nssv1809682,nssv1809672,nssv1809654,nssv1809683,nssv1809685,nssv1809650,nssv1809667,nssv1809675,nssv1809712,nssv1809711 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv478366 1 179706004 179706004 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016810 M 9 1 0 "" NA18507 esv3428926 1 179706145 179706145 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653226,essv8653228,essv8653227 M 185 3 0 "" NA19238,NA19239,NA19240 nsv517925 1 179785978 179795822 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695336 M 2026 0 1 CACNA1E esv3323984 1 179854965 179854982 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902015,essv8902016,essv8902017,essv8902013,essv8902010,essv8902007,essv8902005,essv8902009,essv8902012,essv8902011,essv8902018,essv8902006,essv8902008,essv8902019,essv8902020 M 185 15 0 CACNA1E NA07000,NA07037,NA07347,NA11920,NA12004,NA12006,NA12155,NA12489,NA18502,NA18510,NA18519,NA18566,NA18912,NA19129,NA19225 esv3310337 1 179867889 179867890 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838626,essv7837326 M 185 2 0 CACNA1E NA19238,NA19240 esv3448829 1 179867890 179867901 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673818,essv8673819 M 185 2 0 CACNA1E NA12878,NA12891 esv3306940 1 179867896 179867897 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7789483,essv7805081,essv7825900,essv7783698,essv7770885,essv7789125,essv7826311,essv7802883,essv7814071,essv7774073,essv7806447,essv7790497,essv7790351,essv7816515,essv7836514,essv7786290,essv7779828,essv7775166,essv7807122,essv7803975,essv7792063 M 185 21 0 CACNA1E NA07000,NA07037,NA11920,NA12004,NA12006,NA12155,NA12489,NA12815,NA12878,NA12891,NA18502,NA18508,NA18510,NA18516,NA18517,NA18519,NA18520,NA18916,NA19129,NA19137,NA19225 nsv516290 1 179871788 179878664 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv685471,nssv667373 M 2026 2 0 CACNA1E nsv477334 1 179994078 179994078 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019076 M 9 1 0 CACNA1E NA18517 nsv1006813 1 180116760 180163022 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704831 M 29084 0 1 "" esv3401166 1 180174595 180174614 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597180 M 185 1 0 "" NA12234 nsv3799 1 180186090 180202353 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3561 M 9 1 0 "" NA12878 esv2630908 1 180304237 180305196 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5200092 M 1 1 0 "" NA18507 esv1205084 1 180304752 180304752 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4225969 M 2 1 0 "" HuRef esv2503588 1 180338099 180339462 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5191593 M 1 0 1 "" NA18507 nsv548358 1 180346609 181387651 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729737 M 17421 1 0 DHX9,GLUL,LAMC1,LINC00272,LOC284648,LOC400799,NPL,RGS16,RGS8,RGSL1,RNASEL,SHCBP1L,TEDDM1 esv2547222 1 180373938 180374430 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5334134 M 1 1 0 "" NA18507 nsv512752 1 180374050 180374240 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625381 M 1 1 0 "" 1 esv1422616 1 180374235 180374235 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4025853 M 2 1 0 "" HuRef esv3348817 1 180466514 180466530 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863784 M 185 1 0 LOC400799 NA12005 nsv523295 1 180474434 180478046 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699035 M 2026 0 1 LOC400799 esv27430 1 180529371 180536529 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11368 M 40 1 0 LOC400799 NA19240 esv1007138 1 180536281 180540938 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564592 M 3 1 0 LOC400799 HuRef esv25907 1 180537011 180538452 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19823 M 40 0 1 LOC400799 NA18858 esv8519 1 180555700 180556369 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30960 M 1 0 0 "" nsv946531 1 180571745 180572245 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809735,nssv1810733,nssv1809733,nssv1809785,nssv1809743,nssv1809740,nssv1810720,nssv1809751,nssv1809745,nssv1809768,nssv1809722,nssv1809781,nssv1809717,nssv1809714,nssv1809732,nssv1809758,nssv1809794,nssv1809782,nssv1809721,nssv1809769,nssv1809728,nssv1809780,nssv1809719,nssv1809790,nssv1809731,nssv1810728,nssv1809723,nssv1809772,nssv1810722,nssv1809747,nssv1810721,nssv1809787,nssv1809792,nssv1809754,nssv1809742,nssv1809776,nssv1809739,nssv1810725,nssv1810724,nssv1809746,nssv1809725,nssv1809784,nssv1809729,nssv1809774,nssv1809736,nssv1810731,nssv1809720,nssv1809741,nssv1809727,nssv1809756,nssv1809716,nssv1809783,nssv1809734,nssv1810726,nssv1809793,nssv1809773,nssv1809795,nssv1809761,nssv1809724,nssv1809778,nssv1810723,nssv1809737,nssv1809730,nssv1809752,nssv1809715,nssv1809777,nssv1809791,nssv1810730,nssv1809726,nssv1810729,nssv1809718,nssv1809750,nssv1809738,nssv1809788,nssv1809753,nssv1809771,nssv1809763,nssv1809755,nssv1810734,nssv1809760,nssv1810727,nssv1809786,nssv1809775,nssv1809762,nssv1809748,nssv1809744,nssv1809757,nssv1809765,nssv1809749,nssv1810732,nssv1809759,nssv1809764,nssv1809789,nssv1809770,nssv1809766,nssv1809767,nssv1809779 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548359 1 180572561 180586157 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729738 M 17421 1 0 "" nsv946532 1 180619819 180621393 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810745,nssv1810805,nssv1810738,nssv1810803,nssv1810754,nssv1810810,nssv1810743,nssv1810789,nssv1810812,nssv1810767,nssv1810740,nssv1810762,nssv1810813,nssv1810774,nssv1810749,nssv1810829,nssv1810747,nssv1810806,nssv1810752,nssv1810800,nssv1810816,nssv1810788,nssv1810815,nssv1810796,nssv1810756,nssv1810780,nssv1810737,nssv1810786,nssv1810746,nssv1810793,nssv1810819,nssv1810787,nssv1810760,nssv1810758,nssv1810763,nssv1810775,nssv1810759,nssv1810772,nssv1810818,nssv1810795,nssv1810766,nssv1810761,nssv1810820,nssv1810801,nssv1810817,nssv1810791,nssv1810744,nssv1810808,nssv1810764,nssv1810779,nssv1810748,nssv1810790,nssv1810741,nssv1810768,nssv1810755,nssv1810822,nssv1810821,nssv1810771,nssv1810753,nssv1810828,nssv1810757,nssv1810811,nssv1810751,nssv1810794,nssv1810736,nssv1810785,nssv1810814,nssv1810781,nssv1810750,nssv1810824,nssv1810739,nssv1810823,nssv1810742,nssv1810797,nssv1810802,nssv1810826,nssv1810773,nssv1810825,nssv1810770,nssv1810792,nssv1810809,nssv1810769,nssv1810735,nssv1810807,nssv1810804,nssv1810777,nssv1808773,nssv1810782,nssv1810827,nssv1808774,nssv1810778,nssv1810783,nssv1810799,nssv1810765,nssv1810776,nssv1810784,nssv1810798 M 97 10 0 GLUL HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946533 1 180623978 180624610 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808800,nssv1808821,nssv1808855,nssv1808822,nssv1808860,nssv1808809,nssv1808783,nssv1808845,nssv1808790,nssv1808827,nssv1808780,nssv1808813,nssv1808792,nssv1808835,nssv1808806,nssv1808819,nssv1808859,nssv1808817,nssv1808858,nssv1808848,nssv1808787,nssv1808839,nssv1808797,nssv1808825,nssv1808803,nssv1808851,nssv1808788,nssv1808823,nssv1808853,nssv1808865,nssv1808857,nssv1808862,nssv1808804,nssv1808838,nssv1808785,nssv1808815,nssv1808781,nssv1808863,nssv1808795,nssv1808844,nssv1808784,nssv1808816,nssv1808782,nssv1808836,nssv1808854,nssv1808849,nssv1808793,nssv1808832,nssv1808789,nssv1808814,nssv1808786,nssv1808843,nssv1808791,nssv1808812,nssv1808776,nssv1808807,nssv1808796,nssv1808824,nssv1808799,nssv1808846,nssv1808777,nssv1808847,nssv1808778,nssv1808842,nssv1808852,nssv1808867,nssv1808779,nssv1808802,nssv1808856,nssv1808864,nssv1808861,nssv1808866,nssv1808794,nssv1808820,nssv1808868,nssv1808840,nssv1808805,nssv1808808,nssv1808828,nssv1808831,nssv1808798,nssv1808826,nssv1808775,nssv1808833,nssv1808841,nssv1808811,nssv1808850,nssv1808810,nssv1808801,nssv1808818,nssv1808830,nssv1808829,nssv1808837,nssv1808870,nssv1808869,nssv1808871,nssv1808834 M 97 10 0 GLUL HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv22717 1 180626201 180628113 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12401 M 40 0 1 GLUL NA12156 dgv658n54 1 180626686 180628087 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548360,nsv548361,nsv548362,nsv548363 M 17421 5 0 GLUL dgv659n54 1 180627219 180628087 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548364,nsv548365 M 17421 2 0 GLUL esv3302826 1 180687114 180687241 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731731,essv7736307,essv7731915,essv7737066,essv7738167,essv7733215,essv7733320,essv7732068,essv7734362,essv7738597 M 185 10 0 RGSL1 NA07357,NA11830,NA12004,NA12043,NA12249,NA12776,NA18562,NA18608,NA18943,NA18965 esv3404570 1 180687464 180687480 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673823,essv8673822,essv8673824 M 185 3 0 RGSL1 NA12878,NA12891,NA19238 nsv825531 1 180709408 180878928 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1424779 M 31 0 1 LOC284648,RGS16,RGSL1,RNASEL AK2 nsv825542 1 180732932 180755753 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434629 M 31 1 0 RGSL1 NA18592 nsv825553 1 180741842 180755772 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1439492 M 31 1 0 RGSL1 NA18537 nsv528762 1 180768132 180773445 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705424 M 2026 0 1 RGSL1 esv3302856 1 180769073 180769175 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7734452,essv7735228,essv7735886,essv7733926,essv7738854,essv7738071,essv7732723,essv7737405,essv7737738 M 185 9 0 RGSL1 NA12044,NA18579,NA18858,NA18861,NA18916,NA18949,NA18952,NA19129,NA19138 nsv825564 1 180809030 180809563 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1424780 M 31 0 1 RNASEL AK2 esv1010175 1 180809214 180851986 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563935 M 3 0 1 LOC284648,RGS16,RNASEL HuRef esv3360297 1 180826495 180826510 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863785 M 185 1 0 "" NA12005 nsv3810 1 180866368 180897348 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7892 M 9 0 1 RGS8 NA12156 esv3381060 1 180879652 180881450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692079 M 185 1 0 "" NA19239 esv2101755 1 180986343 180986759 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4851441 M 1 0 1 "" NA18507 esv26933 1 181043260 181048506 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15957 M 40 0 1 NPL NA12489 dgv660n54 1 181044374 181048442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548372,nsv548371,nsv548369,nsv548366,nsv548367,nsv548368 M 17421 0 21 NPL nsv548370 1 181044374 181053576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729765 M 17421 0 1 NPL dgv661n54 1 181045358 181048193 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548374,nsv548373 M 17421 0 2 NPL nsv159118 1 181054074 181063378 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177696 M 24 NPL esv2537876 1 181088438 181089211 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5363012 M 1 1 0 DHX9 NA18507 nsv998656 1 181122321 181244093 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704832 M 29084 1 0 DHX9,SHCBP1L dgv477n100 1 181141424 181198870 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999706,nsv1012082,nsv1007240,nsv1012235,nsv1002297,nsv1005986,nsv1005215 M 29084 7 0 SHCBP1L nsv946534 1 181177179 181178510 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809815,nssv1809850,nssv1809804,nssv1809848,nssv1809873,nssv1809833,nssv1809821,nssv1809831,nssv1809874,nssv1809823,nssv1809877,nssv1809852,nssv1809880,nssv1809830,nssv1809827,nssv1809861,nssv1809876,nssv1809867,nssv1809813,nssv1809862,nssv1809806,nssv1809796,nssv1809803,nssv1809829,nssv1809801,nssv1809846,nssv1809879,nssv1809819,nssv1809802,nssv1809854,nssv1809824,nssv1809884,nssv1809882,nssv1809858,nssv1809810,nssv1809851,nssv1809799,nssv1809869,nssv1809809,nssv1809883,nssv1809818,nssv1809872,nssv1809811,nssv1809887,nssv1809798,nssv1809828,nssv1809825,nssv1809864,nssv1809814,nssv1809866,nssv1809878,nssv1809856,nssv1809816,nssv1809836,nssv1809808,nssv1809889,nssv1809817,nssv1809863,nssv1809875,nssv1809860,nssv1809807,nssv1809837,nssv1809881,nssv1809890,nssv1809812,nssv1809891,nssv1809797,nssv1809892,nssv1809820,nssv1809865,nssv1809805,nssv1809840,nssv1809800,nssv1809838,nssv1809886,nssv1809855,nssv1809822,nssv1809859,nssv1809888,nssv1809843,nssv1809885,nssv1809870,nssv1809835,nssv1809853,nssv1809841,nssv1809832,nssv1809845,nssv1809839,nssv1809871,nssv1809844,nssv1809842,nssv1809857,nssv1809849,nssv1809868,nssv1809834,nssv1809826,nssv1809847 M 97 10 0 SHCBP1L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946535 1 181194244 181196890 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809901,nssv1809980,nssv1809912,nssv1809934,nssv1809904,nssv1809989,nssv1809895,nssv1809963,nssv1809971,nssv1809958,nssv1809975,nssv1809936,nssv1809897,nssv1809923,nssv1809924,nssv1809987,nssv1809977,nssv1809968,nssv1809973,nssv1809944,nssv1809902,nssv1809931,nssv1809898,nssv1809938,nssv1809907,nssv1809929,nssv1809910,nssv1809930,nssv1809974,nssv1809928,nssv1809976,nssv1809945,nssv1809900,nssv1809965,nssv1809921,nssv1809927,nssv1809917,nssv1809893,nssv1809908,nssv1809988,nssv1809903,nssv1809964,nssv1809914,nssv1809947,nssv1809918,nssv1809949,nssv1809979,nssv1809951,nssv1809915,nssv1809946,nssv1809906,nssv1809959,nssv1809899,nssv1809926,nssv1809922,nssv1809969,nssv1809896,nssv1809948,nssv1809913,nssv1809966,nssv1809970,nssv1809925,nssv1809911,nssv1809943,nssv1809972,nssv1809955,nssv1809905,nssv1809920,nssv1809909,nssv1809984,nssv1809894,nssv1809986,nssv1809978,nssv1809960,nssv1809961,nssv1809981,nssv1809953,nssv1809957,nssv1809916,nssv1809937,nssv1809962,nssv1809935,nssv1809967,nssv1809952,nssv1809919,nssv1809950,nssv1809933,nssv1809941,nssv1809940,nssv1809982,nssv1809932,nssv1809985,nssv1809939,nssv1809942,nssv1809956,nssv1809983,nssv1809954 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26421 1 181204460 181205783 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20875 M 40 0 4 "" NA18505,NA18517,NA19147,NA19225 esv2170532 1 181218447 181219119 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4706964 M 1 0 1 "" NA18507 esv4413 1 181218588 181219025 CNV loss Wang_et_al_2008 18987735 Sequencing essv26854 M 1 0 1 "" YH nsv159601 1 181218647 181218947 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178179 M 24 "" nsv819917 1 181378973 181379184 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419237 M 2 0 1 LAMC1 AK1 esv1328001 1 181385388 181385446 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4359274 M 2 0 1 "" HuRef esv1457903 1 181385564 181385627 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3885748 M 2 0 1 "" HuRef esv1659279 1 181385629 181385700 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3788525 M 2 0 1 "" HuRef nsv548375 1 181387651 181444077 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729770 M 17421 1 0 LAMC2 nsv825575 1 181392500 181393965 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1424398 M 31 1 0 "" NA18947 esv33222 1 181417109 181418317 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv94919,essv98549,essv100957,essv99177 M 51 4 0 "" 21693,22085,22231,22275 nsv478756 1 181420533 181420533 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019218 M 9 1 0 "" NA18507 esv33688 1 181431585 181432323 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94731,essv96331,essv93858,essv100888,essv97844,essv95097 M 51 0 6 LAMC2 21634,21656,21721,21791,21837,22371 nsv946537 1 181436978 181438393 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809996,nssv1810066,nssv1810014,nssv1810062,nssv1809998,nssv1810061,nssv1810002,nssv1810063,nssv1810011,nssv1810025,nssv1810074,nssv1810029,nssv1810070,nssv1810028,nssv1810076,nssv1810033,nssv1809992,nssv1810051,nssv1809995,nssv1810020,nssv1810019,nssv1810086,nssv1809997,nssv1810065,nssv1810021,nssv1810041,nssv1810073,nssv1810052,nssv1809994,nssv1810035,nssv1810018,nssv1810053,nssv1810068,nssv1810026,nssv1810004,nssv1810040,nssv1810007,nssv1810084,nssv1810071,nssv1810042,nssv1810001,nssv1810055,nssv1810009,nssv1810027,nssv1810005,nssv1810022,nssv1809999,nssv1810043,nssv1810067,nssv1810056,nssv1810012,nssv1810044,nssv1810003,nssv1810024,nssv1809993,nssv1810023,nssv1810010,nssv1810045,nssv1810015,nssv1810048,nssv1810072,nssv1810057,nssv1810008,nssv1810085,nssv1810069,nssv1810030,nssv1810000,nssv1810060,nssv1810006,nssv1810077,nssv1810075,nssv1810046,nssv1809991,nssv1810054,nssv1810078,nssv1810083,nssv1810081,nssv1809990,nssv1810034,nssv1810016,nssv1810059,nssv1810058,nssv1810050,nssv1810017,nssv1810032,nssv1810080,nssv1810037,nssv1810064,nssv1810039,nssv1810013,nssv1810049,nssv1810038,nssv1810047,nssv1810079,nssv1810036,nssv1810082,nssv1810031 M 97 10 0 LAMC2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv999841 1 181487560 181537477 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483811 M 29084 1 0 NMNAT2 nsv946538 1 181500051 181503428 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811040,nssv1811058,nssv1810099,nssv1811100,nssv1810093,nssv1811080,nssv1811030,nssv1811056,nssv1810101,nssv1811068,nssv1810090,nssv1811099,nssv1810098,nssv1811083,nssv1810096,nssv1811049,nssv1811088,nssv1811075,nssv1811092,nssv1811106,nssv1810092,nssv1811054,nssv1811091,nssv1811079,nssv1811035,nssv1811052,nssv1810095,nssv1811059,nssv1811032,nssv1811101,nssv1810097,nssv1811043,nssv1811042,nssv1811073,nssv1810091,nssv1811038,nssv1811039,nssv1811060,nssv1811094,nssv1811057,nssv1811095,nssv1811086,nssv1811036,nssv1811072,nssv1810094,nssv1811062,nssv1811093,nssv1811082,nssv1810102,nssv1811074,nssv1810089,nssv1811064,nssv1810100,nssv1811063,nssv1811097,nssv1811105,nssv1811096,nssv1811069,nssv1811089,nssv1811065,nssv1810103,nssv1811107,nssv1811031,nssv1811077,nssv1811029,nssv1811085,nssv1810088,nssv1811045,nssv1811033,nssv1811071,nssv1811090,nssv1811103,nssv1811028,nssv1811034,nssv1811076,nssv1811081,nssv1811050,nssv1811037,nssv1811051,nssv1811046,nssv1811104,nssv1811048,nssv1811066,nssv1811053,nssv1811047,nssv1811067,nssv1811084,nssv1811055,nssv1811098,nssv1811070,nssv1810087,nssv1811041,nssv1811078,nssv1811044,nssv1811102,nssv1811061,nssv1811087 M 97 10 0 NMNAT2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv437256 1 181668503 181681941 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467137 M 60 0 1 "" NA18515 esv3375605 1 181781886 181781899 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863786 M 185 1 0 SMG7 NA12005 nsv825587 1 181799760 181809284 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431853 M 31 0 1 NCF2 AK20 nsv477962 1 181913984 181913984 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019334 M 9 1 0 RGL1 NA18517 nsv832015 1 181945342 182142041 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441533 M 95 1 0 RGL1 nsv825598 1 182044858 182051936 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433456,nssv1440161 M 31 2 0 RGL1 NA18526,NA18564 esv3302732 1 182045033 182051977 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7738910,essv7734191 M 185 2 0 RGL1 NA18526,NA18564 nsv441723 1 182046713 182052162 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656815,nssv1656816,nssv1656817 M 270 3 0 RGL1 NA18526,NA18532,NA18564 nsv832026 1 182051688 182228470 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441561,nssv1441544,nssv1441549,nssv1441576,nssv1441567,nssv1441570,nssv1441546,nssv1441556,nssv1441568,nssv1441550,nssv1441566,nssv1441573,nssv1441539,nssv1441535,nssv1441565,nssv1441545,nssv1441543,nssv1441571,nssv1441562,nssv1441575,nssv1441559,nssv1441540,nssv1441558,nssv1441538,nssv1441551,nssv1441569,nssv1441542,nssv1441555,nssv1441579,nssv1441537,nssv1441580,nssv1441581,nssv1441553,nssv1441572,nssv1441547,nssv1441536,nssv1441557,nssv1441560,nssv1441534,nssv1441548,nssv1441578,nssv1441577,nssv1441554,nssv1441564 M 95 4 40 COLGALT2,RGL1 nsv478839 1 182089596 182089596 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013768 M 9 1 0 RGL1 NA18507 nsv525878 1 182109727 182180163 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702078 M 2026 1 0 COLGALT2,RGL1 esv1709028 1 182122964 182122964 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4010389 M 2 1 0 RGL1 HuRef esv2010262 1 182191241 182191664 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4830107 M 1 0 1 COLGALT2 NA18507 nsv526480 1 182199082 182204825 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702789 M 2026 0 1 COLGALT2 esv24684 1 182245900 182247200 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18374,esv12211 M 40 0 6 COLGALT2 NA18508,NA19099,NA19108,NA19147,NA19190,NA19225 esv1010925 1 182324416 182324416 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585729 M 3 1 0 "" HuRef nsv473327 1 182342394 182342394 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012797 M 9 1 0 "" NA19129 esv3443807 1 182376226 182376332 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740926 M 185 1 0 "" NA12878 nsv474818 1 182400772 182400772 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015370 M 9 1 0 "" NA18956 nsv818622 1 182411618 182425419 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417161 M 112 0 1 "" NA12234 nsv478775 1 182414583 182414583 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018020 M 9 1 0 "" NA18507 esv3417132 1 182425007 182425026 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597225 M 185 1 0 "" NA19143 nsv528772 1 182555443 182557138 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705436 M 2026 0 1 "" nsv3821 1 182586166 182631859 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6004 M 9 0 1 C1orf21 NA12156 esv3396096 1 182589487 182589518 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902060,essv8902049,essv8902056,essv8902063,essv8902055,essv8902046,essv8902042,essv8902065,essv8902064,essv8902051,essv8902044,essv8902048,essv8902059,essv8902052,essv8902053,essv8902041,essv8902062,essv8902045,essv8902061,essv8902043,essv8902057,essv8902050,essv8902054 M 185 23 0 "" NA11831,NA11931,NA12044,NA12156,NA12287,NA12489,NA18499,NA18511,NA18853,NA18858,NA18916,NA18947,NA18949,NA18951,NA18956,NA18961,NA18965,NA19005,NA19099,NA19108,NA19114,NA19190,NA19225 esv3303619 1 182589497 182589498 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7754495,essv7751398,essv7753987,essv7747472,essv7762013,essv7760683,essv7743228,essv7760500,essv7743667,essv7742971,essv7755409,essv7761401,essv7747155,essv7743464,essv7740337,essv7743942,essv7753539,essv7744859,essv7751120,essv7748790,essv7746340,essv7752092,essv7747756 M 185 23 0 "" NA11831,NA11931,NA12044,NA12156,NA12287,NA12489,NA18499,NA18511,NA18853,NA18858,NA18916,NA18947,NA18949,NA18951,NA18956,NA18961,NA18965,NA19005,NA19099,NA19108,NA19114,NA19190,NA19225 nsv478651 1 182711268 182711268 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015783 M 9 1 0 C1orf21 NA18507 nsv832037 1 182834817 183023220 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441582 M 95 1 0 C1orf21,EDEM3 nsv1008237 1 182849828 182876443 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495760 M 29084 1 0 C1orf21 dgv20n21 1 182849917 182863207 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv528925,nsv525959 M 2026 0 2 C1orf21 nsv832048 1 182926769 183125425 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441584,nssv1441583 M 95 0 2 EDEM3,FAM129A dgv478n100 1 182930521 182981818 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001244,nsv1010371 M 29084 0 2 EDEM3 nsv1009529 1 182930521 182997838 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487288 M 29084 0 1 EDEM3 nsv508053 1 182931516 182937516 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622301,nssv624227 M 4 0 0 EDEM3 NA10860,NA18994 nsv508677 1 183045243 183091925 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617374 M 4 0 1 FAM129A CHM nsv3832 1 183051065 183059294 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6014 M 9 0 1 FAM129A NA12156 esv3384812 1 183058875 183058894 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597236 M 185 1 0 FAM129A NA12812 nsv946539 1 183059643 183061460 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811112,nssv1809430,nssv1811122,nssv1809425,nssv1811115,nssv1809447,nssv1811132,nssv1809415,nssv1811116,nssv1809418,nssv1811137,nssv1809432,nssv1811127,nssv1809422,nssv1809438,nssv1809397,nssv1809442,nssv1809450,nssv1811120,nssv1809421,nssv1809436,nssv1811138,nssv1811114,nssv1809406,nssv1811125,nssv1809407,nssv1811113,nssv1809419,nssv1811117,nssv1809403,nssv1809441,nssv1809408,nssv1811118,nssv1809394,nssv1811129,nssv1809409,nssv1809443,nssv1809401,nssv1811136,nssv1809426,nssv1811111,nssv1809410,nssv1811119,nssv1809420,nssv1809389,nssv1809433,nssv1809444,nssv1809414,nssv1811110,nssv1809404,nssv1809437,nssv1809393,nssv1809439,nssv1809411,nssv1811123,nssv1809405,nssv1809440,nssv1809424,nssv1811128,nssv1809416,nssv1811126,nssv1809391,nssv1811124,nssv1809395,nssv1811133,nssv1809398,nssv1811121,nssv1811135,nssv1811130,nssv1809423,nssv1811109,nssv1809452,nssv1809435,nssv1809413,nssv1809453,nssv1809427,nssv1809412,nssv1809399,nssv1809431,nssv1809448,nssv1809392,nssv1809428,nssv1809402,nssv1809429,nssv1809434,nssv1811134,nssv1811131,nssv1809445,nssv1809454,nssv1809449,nssv1809400,nssv1809390,nssv1809446,nssv1809396,nssv1809451,nssv1811108,nssv1809417 M 97 10 0 FAM129A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3843 1 183065293 183124737 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv372,nssv2626,nssv4876,nssv3572,nssv6025 M 9 0 5 FAM129A NA12156,NA12878,NA18555,NA19129,NA19240 nsv525731 1 183078788 183304727 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701895 M 2026 1 0 FAM129A,RNF2 esv2617140 1 183080758 183088104 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5301452 M 1 0 1 FAM129A NA18507 nsv511721 1 183081095 183087451 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626363 M 1 0 1 FAM129A 1 nsv436157 1 183081113 183087451 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465866 M 2 0 1 FAM129A NA18505 esv2335294 1 183081145 183087594 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4670110 M 1 0 1 FAM129A NA18507 nsv498696 1 183081351 183087423 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585410 M 9 0 1 FAM129A dgv6n6 1 183081352 183087422 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159898,nsv160177 M 24 FAM129A esv3890815 1 183126404 183233637 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789396 M 3017 1 0 FAM129A nsv1012048 1 183180581 183226590 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492232 M 29084 0 1 FAM129A esv2521611 1 183203135 183204854 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5211737 M 1 0 1 FAM129A NA18507 esv2244253 1 183203475 183204195 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4944128 M 1 0 1 FAM129A NA18507 esv4945 1 183203581 183204088 CNV loss Wang_et_al_2008 18987735 Sequencing essv27386 M 1 0 1 FAM129A YH esv1001682 1 183203671 183203992 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583014 M 3 0 1 FAM129A HuRef esv1416043 1 183203676 183203998 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3925746 M 2 0 1 FAM129A HuRef esv3310319 1 183217072 183217073 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836685 M 185 1 0 "" NA19239 esv3392727 1 183217075 183217086 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673825,essv8673826 M 185 2 0 "" NA19239,NA19240 esv3389479 1 183217086 183217105 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597247 M 185 1 0 "" NA12874 esv3306992 1 183217087 183217088 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7803232,essv7820238,essv7827413,essv7789530,essv7773619,essv7771572,essv7819177,essv7817619,essv7774429,essv7825840,essv7805570,essv7833169,essv7825227,essv7799476,essv7831634 M 185 15 0 "" NA07037,NA10847,NA11931,NA12004,NA12044,NA12828,NA12874,NA18498,NA18508,NA18517,NA18858,NA19099,NA19147,NA19239,NA19240 esv3375008 1 183217088 183217100 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902073,essv8902070,essv8902067,essv8902074,essv8902066,essv8902071,essv8902068,essv8902077,essv8902075,essv8902076,essv8902072 M 185 11 0 "" NA07037,NA10847,NA12004,NA12044,NA12828,NA18498,NA18508,NA18517,NA18858,NA19099,NA19147 esv2764198 1 183228427 183237134 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006727,essv7006726 M 1109 0 2 "" RW_0129,RW_0186 nsv522073 1 183253348 183279972 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694127 M 2026 0 1 "" esv7397 1 183276164 183278578 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29838 M 1 0 0 "" dgv89n67 1 183276397 183278343 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825609,nsv825620 M 31 0 6 "" AK2,AK20,NA18542,NA18552,NA18973,NA18997 esv29875 1 183276509 183278363 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14588,esv19028 M 40 0 4 "" NA12878,NA18502,NA19190,NA19225 dgv662n54 1 183276534 183277714 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548376,nsv548377,nsv548378,nsv548379 M 17421 0 4 "" dgv663n54 1 183276534 183277862 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548384,nsv548380,nsv548383,nsv548382 M 17421 0 12 "" nsv548381 1 183276534 183278149 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729786,nssv729787,nssv729785,nssv729784,nssv729782,nssv729783,nssv729789,nssv729788,nssv729793,nssv729792,nssv729790,nssv729791,nssv729794 M 17421 0 13 "" dgv664n54 1 183276833 183278149 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548394,nsv548385,nsv548388,nsv548392,nsv548391,nsv548390 M 17421 0 14 "" nsv548386 1 183276937 183277714 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729801 M 17421 0 1 "" dgv665n54 1 183276937 183277964 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548393,nsv548387,nsv548389 M 17421 0 27 "" nsv548395 1 183277235 183278149 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729842 M 17421 0 1 "" nsv548396 1 183304727 183418001 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729843 M 17421 0 1 RNF2,SWT1,TRMT1L nsv521613 1 183338454 183438492 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698231 M 2026 0 1 SWT1,TRMT1L nsv548397 1 183371465 183390253 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729844 M 17421 1 0 TRMT1L nsv548398 1 183403081 184269717 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729845 M 17421 1 0 HMCN1,IVNS1ABP,LOC100288079,SWT1 nsv946540 1 183457728 183467000 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809462,nssv1810418,nssv1810457,nssv1809482,nssv1809477,nssv1810446,nssv1809463,nssv1809478,nssv1809480,nssv1810466,nssv1809460,nssv1810414,nssv1809472,nssv1810467,nssv1809458,nssv1810439,nssv1810459,nssv1810470,nssv1810463,nssv1810429,nssv1809468,nssv1810438,nssv1809464,nssv1810472,nssv1809483,nssv1809481,nssv1810461,nssv1810423,nssv1809470,nssv1810448,nssv1810462,nssv1810453,nssv1810465,nssv1810421,nssv1809476,nssv1810425,nssv1810460,nssv1810436,nssv1809471,nssv1810451,nssv1809467,nssv1809455,nssv1810464,nssv1810426,nssv1809474,nssv1810468,nssv1809469,nssv1810443,nssv1809465,nssv1810427,nssv1809475,nssv1810428,nssv1809457,nssv1810454,nssv1809466,nssv1810442,nssv1809473,nssv1810422,nssv1809486,nssv1810420,nssv1809456,nssv1810471,nssv1810458,nssv1810441,nssv1809479,nssv1809485,nssv1809484,nssv1810475,nssv1810456,nssv1810430,nssv1809459,nssv1810413,nssv1809461,nssv1810435,nssv1810440,nssv1810424,nssv1809487,nssv1810450,nssv1810437,nssv1810432,nssv1810473,nssv1810433,nssv1810417,nssv1810431,nssv1810474,nssv1810412,nssv1810445,nssv1810444,nssv1810469,nssv1810449,nssv1810416,nssv1810452,nssv1810455,nssv1810415,nssv1810419,nssv1810447,nssv1810434 M 97 10 0 SWT1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3855 1 183465170 183498692 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv383 M 9 1 0 SWT1 NA19240 esv2758981 1 183559820 183612394 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756872 M 270 0 2 LOC100288079 NA18582,NA18964 nsv159375 1 183587975 183591244 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177953 M 24 "" nsv1008247 1 183587983 183612394 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704833 M 29084 1 0 "" esv5905 1 183612109 183612284 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28346 M 1 0 0 "" esv2580997 1 183639201 183640826 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5343383 M 1 0 1 "" NA18507 esv6466 1 183639447 183640224 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28907 M 1 0 0 "" esv2255562 1 183639523 183640237 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4543738 M 1 0 1 "" NA18507 esv2494518 1 183639727 183640064 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5342223 M 1 0 1 "" NA18507 nsv472888 1 183664246 183664246 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015675 M 9 1 0 "" NA19129 nsv1001493 1 183675579 183703465 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704834 M 29084 0 1 "" nsv160209 1 183703920 183704102 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178787 M 24 "" esv3309229 1 183771324 183771325 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840375,essv7842601,essv7841326 M 185 3 0 "" NA12878,NA12892,NA19238 esv3304651 1 183771326 183771327 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7756949,essv7742816,essv7751248,essv7750668,essv7745059,essv7760570,essv7747982,essv7749974,essv7754874,essv7747013,essv7757856,essv7742668,essv7762722,essv7761738,essv7760865,essv7745820,essv7758056,essv7754655,essv7748887,essv7743646,essv7750790 M 185 21 0 "" NA11992,NA12878,NA12892,NA18523,NA18547,NA18552,NA18562,NA18564,NA18570,NA18571,NA18592,NA18608,NA18861,NA18944,NA18945,NA18948,NA18961,NA18964,NA19114,NA19238,NA19257 esv3324149 1 183771329 183771341 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902095,essv8902094,essv8902092,essv8902081,essv8902083,essv8902089,essv8902085,essv8902086,essv8902079,essv8902087,essv8902096,essv8902090,essv8902082,essv8902093,essv8902084,essv8902097,essv8902078,essv8902088 M 185 18 0 "" NA11992,NA18523,NA18547,NA18552,NA18562,NA18564,NA18570,NA18571,NA18592,NA18608,NA18861,NA18944,NA18945,NA18948,NA18961,NA18964,NA19114,NA19257 esv3425927 1 183828798 183828834 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902100,essv8902101,essv8902098,essv8902099 M 185 4 0 "" NA18489,NA18498,NA18499,NA18871 esv3306426 1 183828807 183828808 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7741489,essv7744506,essv7761346,essv7762213 M 185 4 0 "" NA18489,NA18498,NA18499,NA18871 esv3890826 1 183966670 184684107 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25790566 M 3017 1 0 C1orf27,HMCN1,OCLM,PDC,PRG4,RNU6-72P,TPR nsv946541 1 183972186 183973637 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810478,nssv1810520,nssv1810479,nssv1810513,nssv1810485,nssv1810496,nssv1810482,nssv1810509,nssv1810483,nssv1810494,nssv1810481,nssv1810508,nssv1810486,nssv1810491,nssv1810480,nssv1810492,nssv1810522,nssv1810477,nssv1810514,nssv1810503,nssv1810516,nssv1810476,nssv1810523,nssv1810521,nssv1810489,nssv1810504,nssv1810498,nssv1810488,nssv1810500,nssv1810511,nssv1810501,nssv1810510,nssv1810497,nssv1810484,nssv1810518,nssv1810517,nssv1810495,nssv1810502,nssv1810499,nssv1810493,nssv1810505,nssv1810515,nssv1810487,nssv1810512,nssv1810507,nssv1810519,nssv1810506,nssv1810490 M 97 10 0 HMCN1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2468461 1 184033130 184034667 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5210007 M 1 0 1 HMCN1 NA18507 esv1976790 1 184033281 184033931 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4640197 M 1 0 1 HMCN1 NA18507 esv2563566 1 184049663 184052685 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5197703 M 1 0 1 HMCN1 NA18507 esv2347927 1 184050148 184052121 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4603420 M 1 0 1 HMCN1 NA18507 esv23364 1 184050194 184051984 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13927 M 40 0 3 HMCN1 NA18505,NA19099,NA19240 esv2572731 1 184067962 184069395 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5393551 M 1 0 1 HMCN1 NA18507 nsv3866 1 184228563 184262775 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2721 M 9 1 0 HMCN1 NA18555 esv2186053 1 184322380 184322766 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4965664 M 1 0 1 HMCN1 NA18507 nsv1007237 1 184404347 184493125 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492487 M 29084 1 0 HMCN1,RNU6-72P dgv479n100 1 184414568 184472811 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003070,nsv1009149,nsv1002503 M 29084 4 0 HMCN1,RNU6-72P dgv480n100 1 184434556 184493125 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008469,nsv1010055,nsv1012840,nsv1009827,nsv1014789 M 29084 6 0 RNU6-72P dgv481n100 1 184437997 184472811 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009983,nsv998436,nsv1009057,nsv1002201 M 29084 4 0 RNU6-72P nsv1014133 1 184448269 184472811 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497358 M 29084 1 0 RNU6-72P nsv1012403 1 184456628 184472811 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498543,nssv3497193,nssv3490062 M 29084 3 0 RNU6-72P dgv482n100 1 184456628 184493125 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998012,nsv1002107 M 29084 5 0 RNU6-72P esv275404 1 184456751 184471514 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585668,essv2585874 M 1250 1 1 RNU6-72P nsv548399 1 184562553 184620084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729846 M 17421 0 1 C1orf27,TPR nsv523794 1 184583111 184594159 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699622 M 2026 0 1 TPR esv2528820 1 184589545 184591037 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5264971 M 1 0 1 TPR NA18507 nsv1012164 1 184590490 184832618 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492747 M 29084 1 0 C1orf27,OCLM,PDC,TPR esv2762201 1 184590502 184832630 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006728 M 1109 1 0 C1orf27,OCLM,PDC,TPR RW_0527 nsv946542 1 184693824 184696724 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810527,nssv1810525,nssv1810526,nssv1810529,nssv1810530,nssv1810528,nssv1810533,nssv1810524,nssv1810531,nssv1810532,nssv1810534 M 97 10 0 PDC HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv527758 1 184718694 184723600 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704245 M 2026 0 1 "" nsv832059 1 184731555 184905748 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441586 M 95 1 0 "" esv9724 1 184754241 184754420 CNV gain Ahn_et_al_2009 19470904 Sequencing essv32165 M 1 0 0 "" esv2762854 1 184813724 185114197 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7003301,essv7003312 M 1109 2 0 PLA2G4A,PTGS2 SW_0568,SW_0647 nsv825631 1 184860490 184860963 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436371 M 31 0 1 "" NA18542 nsv472503 1 184903654 184903654 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010793 M 9 1 0 "" NA18555 nsv548400 1 184907327 184908954 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729847 M 17421 0 1 PTGS2 dgv666n54 1 184907681 184909987 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548402,nsv548401 M 17421 0 2 PTGS2 nsv470750 1 184909052 184967582 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547795 M 443 0 1 PTGS2 HGDP00864 nsv548403 1 184909052 184967582 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729850 M 17421 0 1 PTGS2 nsv548404 1 184913727 184915931 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729851 M 17421 0 1 PTGS2 nsv466261 1 184919018 185009570 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541854 M 1557 0 1 "" 1780862358_A nsv548405 1 184919018 185009570 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173929 M 17421 0 1 "" 1780862358_A nsv466272 1 185009570 185069849 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541863 M 1557 0 1 PLA2G4A HGDP01185 nsv548406 1 185009570 185069849 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173930 M 17421 0 1 PLA2G4A HGDP01185 esv3400948 1 185009820 185009820 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825036 M 185 1 0 "" NA19240 esv994082 1 185009826 185009826 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583373 M 3 1 0 "" HuRef esv1302199 1 185009827 185009827 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4203786 M 2 1 0 "" HuRef esv3351115 1 185009829 185009829 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701359 M 185 1 0 "" NA12878 esv2610871 1 185030742 185032514 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5386326 M 1 0 1 "" NA18507 esv1341597 1 185031632 185032127 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4280070 M 2 0 1 "" HuRef nsv160133 1 185031633 185032127 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178711 M 24 "" esv3339194 1 185092937 185092937 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823344 M 185 1 0 PLA2G4A NA12878 esv1010484 1 185114016 185114016 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566495 M 3 1 0 PLA2G4A HuRef esv1093925 1 185114055 185114055 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3757661 M 2 1 0 PLA2G4A HuRef nsv548407 1 185142082 185218052 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729852 M 17421 0 1 PLA2G4A nsv3877 1 185174182 185207716 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv393 M 9 1 0 PLA2G4A NA19240 nsv1003977 1 185260536 185299246 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704835 M 29084 1 0 "" nsv476953 1 185272844 185272844 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010953 M 9 1 0 "" NA18555 esv2762202 1 185303834 185322184 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006729 M 1109 0 1 "" RW_0117 esv2750817 1 185336978 186256217 CNV loss Pinto_et_al_2007 17911159 SNP array essv6989196,essv6987845,essv6980762,essv6987844,essv6980761 M 771 0 5 "" BEC_132 nsv819411 1 185379909 185393300 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418638 M 2 1 0 "" AK1 esv1963389 1 185382279 185382703 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4656543 M 1 0 1 "" NA18507 esv2601440 1 185393560 185395049 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5202999 M 1 0 1 "" NA18507 esv3890837 1 185397841 185503580 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796367 M 3017 0 1 "" nsv476804 1 185419790 185419790 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012258 M 9 1 0 "" NA12878 esv3396387 1 185448914 185448933 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678356 M 185 1 0 "" NA19240 nsv1008401 1 185535389 185585982 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704836 M 29084 1 0 "" nsv548408 1 185559231 185615061 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729853 M 17421 0 1 "" nsv947456 1 185561954 185570372 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2766108 M 97 0 1 "" HGDP01284 nsv548409 1 185562363 185590901 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729854 M 17421 0 1 "" nsv441724 1 185564993 185567314 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656820,nssv1656818,nssv1656819 M 270 0 3 "" NA18852,NA18854,NA18859 nsv514022 1 185565056 185567248 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2852065,nssv2852019,nssv2852070,nssv2852020,nssv2852060,nssv2852028,nssv2852061,nssv2852041,nssv2852058,nssv2852042,nssv2852087,nssv2852043,nssv2852074,nssv2852046,nssv2852072,nssv2852038,nssv2852088,nssv2852032,nssv2852084,nssv2852033,nssv2852047,nssv2852021,nssv2852085,nssv2852036,nssv2852052,nssv2852039,nssv2852049,nssv2852040,nssv2852083,nssv2852037,nssv2852071,nssv2852023,nssv2852068,nssv2852022,nssv2852055,nssv2852034,nssv2852067,nssv2852045,nssv2852069,nssv2852024,nssv2852062,nssv2852027,nssv2852078,nssv2852030,nssv2852051,nssv2852025,nssv2852082,nssv2852029,nssv2852080,nssv2852035,nssv2852056,nssv2852044,nssv2852048,nssv2852031,nssv2852090,nssv2852026,nssv2852064,nssv2852073,nssv2852076,nssv2852077,nssv2852053,nssv2852059,nssv2852050,nssv2852092,nssv2852091,nssv2852063,nssv2852057,nssv2852089,nssv2852079,nssv2852081,nssv2852086,nssv2852066,nssv2852054,nssv2852093,nssv2852075 M 2366 63 12 "" NA10838,NA10847,NA11893,NA11919,NA12004,NA12005,NA12056,NA12329,NA12335,NA12375,NA12414,NA12489,NA12546,NA12818,NA12827,NA12832,NA12842,NA12891,NA12892,NA18488,NA18497,NA18510,NA18524,NA18558,NA18852,NA18854,NA18856,NA18859,NA18934,NA18935,NA18947,NA18967,NA19116,NA19122,NA19128,NA19131,NA19141,NA19152,NA19160,NA19174,NA19179,NA19183,NA19189,NA19190,NA19197,NA19199,NA19214,NA19224,NA19225,NA19237,NA19239,NA19248,NA19257,NA19258,NA21309,NA21312,NA21313,NA21317,NA21361,NA21362,NA21365,NA21366,NA21388,NA21389,NA21391,NA21399,NA21401,NA21439,NA21442,NA21455,NA21493,NA21514,NA21525,NA21601,NA21635 esv3890848 1 185572301 185579143 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25786359 M 3017 0 1 "" dgv667n54 1 185576227 185640985 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548410,nsv548411 M 17421 2 0 "" nsv522765 1 185587321 185594019 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698405 M 2026 0 1 "" nsv518497 1 185587321 185608061 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695938 M 2026 0 1 "" esv3418122 1 185623611 185623611 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740944 M 185 1 0 "" NA19240 nsv3888 1 185657785 185669511 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2637 M 9 1 0 "" NA18555 esv3432605 1 185664694 185664706 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863788 M 185 1 0 "" NA12005 esv23945 1 185666422 185671672 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20872 M 40 0 2 "" NA18502,NA18858 nsv1008766 1 185678665 185734592 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502217 M 29084 0 1 "" esv3307787 1 185708453 185708454 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768310 M 185 1 0 "" NA12872 esv3386947 1 185708459 185708478 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597258 M 185 1 0 "" NA12872 nsv548412 1 185727521 185732870 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729857 M 17421 1 0 "" esv990600 1 185727831 185733937 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563881 M 3 0 1 "" HuRef nsv511722 1 185730193 185733510 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626364 M 1 0 1 "" 1 esv2511706 1 185731165 185734027 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5253765 M 1 0 1 "" NA18507 esv6027 1 185731223 185733352 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv28468 M 1 0 0 "" esv3001 1 185731237 185733252 CNV loss Wang_et_al_2008 18987735 Sequencing essv25442 M 1 0 1 "" YH nsv821573 1 185731273 185733106 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420780 M 1 0 1 "" NA10851 nsv498697 1 185731451 185733353 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585411 M 9 0 1 "" esv28976 1 185731458 185733106 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18231 M 40 16 0 "" NA06985,NA11931,NA12004,NA12414,NA12749,NA12776,NA12878,NA15510,NA18508,NA18511,NA18523,NA18907,NA18909,NA18916,NA19099,NA19108 nsv825642 1 185731458 185733106 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437940,nssv1435686,nssv1424410,nssv1436372,nssv1431855,nssv1429595,nssv1428059,nssv1438615,nssv1426426,nssv1432441,nssv1440848,nssv1428855,nssv1430382,nssv1421490,nssv1425539,nssv1427294,nssv1423162,nssv1434740,nssv1423808,nssv1440163,nssv1433457,nssv1431111,nssv1437977,nssv1434207,nssv1437255,nssv1422401,nssv1424783,nssv1423993,nssv1439493,nssv1434898 M 31 0 30 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv514023 1 185731472 185733152 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2853422,nssv2853534,nssv2853429,nssv2853482,nssv2853431,nssv2852587,nssv2853410,nssv2850321,nssv2852157,nssv2853486,nssv2853398,nssv2852573,nssv2852183,nssv2853537,nssv2852120,nssv2853565,nssv2853333,nssv2853467,nssv2853391,nssv2853470,nssv2853377,nssv2852564,nssv2853338,nssv2853516,nssv2853406,nssv2852574,nssv2853310,nssv2853583,nssv2853331,nssv2853464,nssv2853300,nssv2853517,nssv2853341,nssv2853543,nssv2852174,nssv2853563,nssv2853362,nssv2852588,nssv2853374,nssv2853476,nssv2853428,nssv2853574,nssv2853421,nssv2853507,nssv2852172,nssv2853504,nssv2853434,nssv2853497,nssv2853354,nssv2853452,nssv2853369,nssv2850323,nssv2852108,nssv2853471,nssv2853332,nssv2852566,nssv2853295,nssv2853509,nssv2853401,nssv2853529,nssv2853352,nssv2853500,nssv2852132,nssv2852569,nssv2852168,nssv2853512,nssv2853299,nssv2853546,nssv2853342,nssv2853494,nssv2852116,nssv2853496,nssv2852096,nssv2853590,nssv2852133,nssv2853436,nssv2852097,nssv2850336,nssv2852103,nssv2853519,nssv2853376,nssv2852596,nssv2853298,nssv2853518,nssv2853328,nssv2850308,nssv2853312,nssv2853528,nssv2853413,nssv2853461,nssv2853389,nssv2852567,nssv2853363,nssv2853554,nssv2852106,nssv2853440,nssv2853384,nssv2852595,nssv2853334,nssv2850315,nssv2852139,nssv2853448,nssv2853399,nssv2850329,nssv2853339,nssv2853568,nssv2853336,nssv2852557,nssv2853393,nssv2853491,nssv2853337,nssv2852558,nssv2852180,nssv2850313,nssv2853433,nssv2853451,nssv2852111,nssv2853477,nssv2852094,nssv2853447,nssv2852156,nssv2853531,nssv2852149,nssv2853542,nssv2853420,nssv2853556,nssv2853414,nssv2853576,nssv2853397,nssv2853468,nssv2852117,nssv2853438,nssv2852095,nssv2853503,nssv2853359,nssv2853539,nssv2852118,nssv2853457,nssv2853349,nssv2853485,nssv2853364,nssv2853538,nssv2852166,nssv2853462,nssv2853379,nssv2852570,nssv2853294,nssv2852577,nssv2852119,nssv2853560,nssv2852124,nssv2853472,nssv2853418,nssv2853548,nssv2852151,nssv2852591,nssv2852114,nssv2853588,nssv2852126,nssv2853460,nssv2853348,nssv2853562,nssv2852177,nssv2853513,nssv2853309,nssv2850326,nssv2853400,nssv2853587,nssv2853394,nssv2850317,nssv2852121,nssv2853579,nssv2852170,nssv2852554,nssv2853357,nssv2852594,nssv2852109,nssv2853495,nssv2853316,nssv2852560,nssv2853305,nssv2853575,nssv2852142,nssv2852571,nssv2852128,nssv2853591,nssv2852143,nssv2853458,nssv2853387,nssv2853541,nssv2852098,nssv2853515,nssv2852099,nssv2853547,nssv2852112,nssv2853506,nssv2853324,nssv2853449,nssv2853308,nssv2853571,nssv2852125,nssv2850307,nssv2853292,nssv2853573,nssv2853296,nssv2853480,nssv2852154,nssv2852555,nssv2853365,nssv2850322,nssv2853325,nssv2852583,nssv2853392,nssv2850331,nssv2853409,nssv2852575,nssv2853381,nssv2850327,nssv2852169,nssv2853578,nssv2853360,nssv2852572,nssv2853386,nssv2850339,nssv2853395,nssv2853441,nssv2852147,nssv2853582,nssv2853382,nssv2852563,nssv2853385,nssv2853527,nssv2852175,nssv2853484,nssv2852181,nssv2853474,nssv2853353,nssv2853450,nssv2853404,nssv2853446,nssv2853343,nssv2853526,nssv2852101,nssv2853489,nssv2853419,nssv2850335,nssv2853350,nssv2853445,nssv2853347,nssv2853435,nssv2852110,nssv2853455,nssv2853425,nssv2853466,nssv2852162,nssv2853444,nssv2853322,nssv2850325,nssv2853311,nssv2853557,nssv2853361,nssv2853524,nssv2853344,nssv2852586,nssv2853367,nssv2853520,nssv2852164,nssv2853540,nssv2853412,nssv2853488,nssv2853345,nssv2852576,nssv2853390,nssv2853502,nssv2852129,nssv2850330,nssv2852131,nssv2853550,nssv2853370,nssv2853559,nssv2853423,nssv2853501,nssv2853405,nssv2853487,nssv2853329,nssv2852581,nssv2853355,nssv2850320,nssv2853358,nssv2853505,nssv2852176,nssv2850309,nssv2852182,nssv2853581,nssv2853388,nssv2853580,nssv2852146,nssv2853493,nssv2853326,nssv2853483,nssv2852102,nssv2853558,nssv2853356,nssv2853569,nssv2853314,nssv2852580,nssv2853307,nssv2853523,nssv2853317,nssv2853586,nssv2853302,nssv2852582,nssv2853415,nssv2853564,nssv2853373,nssv2850316,nssv2853432,nssv2853533,nssv2852100,nssv2850306,nssv2852130,nssv2853439,nssv2852140,nssv2853584,nssv2852145,nssv2853437,nssv2853383,nssv2853514,nssv2853351,nssv2853492,nssv2853416,nssv2850310,nssv2852144,nssv2852562,nssv2852138,nssv2853551,nssv2853408,nssv2850333,nssv2852171,nssv2853545,nssv2853366,nssv2853555,nssv2853304,nssv2853510,nssv2853318,nssv2853481,nssv2852155,nssv2853535,nssv2853323,nssv2852585,nssv2853321,nssv2852589,nssv2853427,nssv2852593,nssv2852123,nssv2853577,nssv2852134,nssv2853478,nssv2852167,nssv2853553,nssv2853319,nssv2853525,nssv2852137,nssv2850337,nssv2853301,nssv2853454,nssv2852115,nssv2853469,nssv2853315,nssv2853456,nssv2852173,nssv2852584,nssv2853402,nssv2850312,nssv2853293,nssv2853566,nssv2853378,nssv2850319,nssv2853330,nssv2853585,nssv2853403,nssv2853508,nssv2853313,nssv2852578,nssv2853426,nssv2853530,nssv2852159,nssv2852590,nssv2852161,nssv2853532,nssv2853297,nssv2850311,nssv2852113,nssv2850332,nssv2852141,nssv2853499,nssv2853340,nssv2852592,nssv2852158,nssv2853465,nssv2852105,nssv2853473,nssv2852104,nssv2853561,nssv2853368,nssv2853442,nssv2853335,nssv2853592,nssv2853303,nssv2853511,nssv2853371,nssv2853453,nssv2852148,nssv2853544,nssv2852179,nssv2853459,nssv2852165,nssv2853589,nssv2852184,nssv2852556,nssv2852135,nssv2853443,nssv2852153,nssv2853475,nssv2853380,nssv2853570,nssv2852136,nssv2853463,nssv2852163,nssv2850314,nssv2852127,nssv2853552,nssv2853306,nssv2850328,nssv2852160,nssv2853490,nssv2853424,nssv2852579,nssv2853411,nssv2853572,nssv2853327,nssv2850334,nssv2853430,nssv2853498,nssv2852107,nssv2853567,nssv2852150,nssv2853479,nssv2853346,nssv2853521,nssv2852152,nssv2853549,nssv2853320,nssv2853536,nssv2853372,nssv2852561,nssv2853417,nssv2852568,nssv2852178,nssv2852565,nssv2852122,nssv2852559,nssv2853396,nssv2850338,nssv2853375,nssv2850318,nssv2853407,nssv2850324,nssv2853522 M 2366 0 469 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11993,NA11994,NA11995,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12753,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18500,NA18501,NA18503,NA18504,NA18507,NA18508,NA18509,NA18510,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 esv2508611 1 185731535 185733999 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5336800 M 1 0 0 "" NA18507 dgv668n54 1 185731577 185733024 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548414,nsv548413 M 17421 4 0 "" nsv548415 1 185731881 185732712 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729862 M 17421 1 0 "" nsv548416 1 185732087 185733024 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729863 M 17421 1 0 "" nsv548417 1 185732139 185733024 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729866,nssv729864,nssv729865 M 17421 2 1 "" nsv548418 1 185732373 185733024 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv729874,nssv729873,nssv729872,nssv729882,nssv729939,nssv729871,nssv729870,nssv729881,nssv729869,nssv729868,nssv729867,nssv729879,nssv729878,nssv729875,nssv729880,nssv729876,nssv729877,nssv729937,nssv729884,nssv729910,nssv729885,nssv729890,nssv729883,nssv729889,nssv729887,nssv729938,nssv729886,nssv729888,nssv729909,nssv729896,nssv729895,nssv729891,nssv729894,nssv729893,nssv729892,nssv729898,nssv729897,nssv729900,nssv729899,nssv729908,nssv729901,nssv729907,nssv729902,nssv729906,nssv729904,nssv729905,nssv729903,nssv729917,nssv729911,nssv729936,nssv729935,nssv729916,nssv729912,nssv729914,nssv729913,nssv729915,nssv729934,nssv729924,nssv729925,nssv729919,nssv729918,nssv729923,nssv729922,nssv729921,nssv729920,nssv729927,nssv729933,nssv729926,nssv729932,nssv729931,nssv729929,nssv729928,nssv729930,nssv729954,nssv729942,nssv729941,nssv729953,nssv729940,nssv729945,nssv729952,nssv729944,nssv729943,nssv729946,nssv729951,nssv729947,nssv729948,nssv729950,nssv729949,nssv729955,nssv729958,nssv729957,nssv729956,nssv729959 M 17421 0 93 "" nsv548419 1 185732765 185733024 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730019,nssv730124,nssv729979,nssv729965,nssv729978,nssv729964,nssv729963,nssv729960,nssv729961,nssv729962,nssv729966,nssv729967,nssv729970,nssv729977,nssv729969,nssv729968,nssv729975,nssv729971,nssv729976,nssv729974,nssv729972,nssv729973,nssv730018,nssv729980,nssv729981,nssv729982,nssv729984,nssv730000,nssv729985,nssv729983,nssv729999,nssv729990,nssv729988,nssv729986,nssv729989,nssv729987,nssv729994,nssv729998,nssv729993,nssv729992,nssv729991,nssv729997,nssv729996,nssv729995,nssv730003,nssv730017,nssv730011,nssv730001,nssv730002,nssv730006,nssv730005,nssv730004,nssv730010,nssv730009,nssv730008,nssv730007,nssv730013,nssv730012,nssv730014,nssv730015,nssv730016,nssv730025,nssv730020,nssv730021,nssv730023,nssv730022,nssv730024,nssv730027,nssv730026,nssv730028,nssv730034,nssv730035,nssv730033,nssv730032,nssv730059,nssv730031,nssv730029,nssv730030,nssv730058,nssv730046,nssv730038,nssv730037,nssv730036,nssv730039,nssv730044,nssv730045,nssv730041,nssv730040,nssv730042,nssv730043,nssv730047,nssv730057,nssv730049,nssv730048,nssv730051,nssv730050,nssv730054,nssv730056,nssv730055,nssv730052,nssv730053,nssv730060,nssv730123,nssv730072,nssv730066,nssv730061,nssv730064,nssv730065,nssv730063,nssv730062,nssv730071,nssv730069,nssv730068,nssv730067,nssv730070,nssv730076,nssv730075,nssv730088,nssv730074,nssv730073,nssv730080,nssv730079,nssv730087,nssv730078,nssv730077,nssv730082,nssv730081,nssv730086,nssv730084,nssv730085,nssv730083,nssv730090,nssv730089,nssv730121,nssv730102,nssv730095,nssv730093,nssv730101,nssv730092,nssv730091,nssv730094,nssv730097,nssv730096,nssv730099,nssv730100,nssv730098,nssv730120,nssv730122,nssv730106,nssv730105,nssv730110,nssv730104,nssv730103,nssv730108,nssv730107,nssv730109,nssv730114,nssv730112,nssv730113,nssv730111,nssv730119,nssv730118,nssv730117,nssv730115,nssv730116,nssv730125,nssv730141,nssv730126,nssv730130,nssv730142,nssv730128,nssv730127,nssv730129,nssv730132,nssv730131,nssv730136,nssv730135,nssv730134,nssv730133,nssv730138,nssv730140,nssv730137,nssv730139,nssv730149,nssv730144,nssv730145,nssv730143,nssv730147,nssv730148,nssv730146,nssv730152,nssv730153,nssv730150,nssv730151,nssv730162,nssv730161,nssv730154,nssv730157,nssv730160,nssv730156,nssv730159,nssv730155,nssv730158 M 17421 0 203 "" esv7762 1 185733098 185733577 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30203 M 1 0 0 "" esv1011645 1 185733101 185733350 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3939389 M 2 0 0 "" HuRef nsv3899 1 185735281 185780645 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6036 M 9 0 1 "" NA12156 esv3360434 1 185763876 185763904 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673830 M 185 1 0 "" NA19238 esv3310171 1 185763886 185763887 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838291,essv7838199 M 185 2 0 "" NA12878,NA12891 nsv466284 1 185779904 185866060 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541871 M 1557 1 0 "" HGDP00526 nsv548420 1 185779904 185866060 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173931 M 17421 1 0 "" HGDP00526 nsv1011444 1 185779904 186039832 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704837 M 29084 0 1 "" nsv946543 1 185798827 185799956 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810559,nssv1810571,nssv1810547,nssv1810591,nssv1810549,nssv1810600,nssv1810546,nssv1810570,nssv1810620,nssv1810589,nssv1810612,nssv1810625,nssv1810560,nssv1810605,nssv1810616,nssv1810608,nssv1810554,nssv1810601,nssv1810617,nssv1810572,nssv1810545,nssv1810622,nssv1810543,nssv1810590,nssv1810556,nssv1810561,nssv1810564,nssv1810562,nssv1810613,nssv1810595,nssv1810615,nssv1810611,nssv1810540,nssv1810568,nssv1810552,nssv1810575,nssv1810621,nssv1810609,nssv1810541,nssv1810603,nssv1810619,nssv1810594,nssv1810544,nssv1810558,nssv1810618,nssv1810628,nssv1810563,nssv1810623,nssv1810566,nssv1810579,nssv1810553,nssv1810626,nssv1810548,nssv1810602,nssv1810538,nssv1810569,nssv1810557,nssv1810604,nssv1810542,nssv1810585,nssv1810551,nssv1810573,nssv1810614,nssv1810607,nssv1810536,nssv1810535,nssv1810555,nssv1810581,nssv1810537,nssv1810624,nssv1810539,nssv1810592,nssv1810550,nssv1810627,nssv1810597,nssv1810582,nssv1810631,nssv1810598,nssv1810599,nssv1810584,nssv1810610,nssv1810565,nssv1810583,nssv1810577,nssv1810576,nssv1810586,nssv1810629,nssv1810596,nssv1810578,nssv1810580,nssv1810574,nssv1810567,nssv1810588,nssv1810606,nssv1810630,nssv1810587,nssv1810593 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548421 1 185815066 185896809 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730163 M 17421 0 1 "" nsv517291 1 185819288 185866060 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv679016,nssv682899,nssv653321,nssv658705,nssv654217,nssv681964,nssv659699,nssv687511,nssv682475,nssv683038,nssv658758,nssv691414,nssv653013,nssv661486,nssv685472,nssv661819,nssv670152,nssv663117,nssv670220,nssv662004,nssv652158,nssv659007,nssv684899,nssv673863,nssv689742,nssv657606,nssv652883,nssv657962,nssv662305,nssv664938,nssv671386 M 2026 0 31 "" esv2588850 1 185833055 185855129 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5248923 M 1 0 1 "" NA18507 nsv818633 1 185839646 185847926 CNV loss Wang_et_al_2007 17921354 SNP array nssv1418247,nssv1418246,nssv1418425 M 112 0 3 "" NA19092,NA19094,NA19140 nsv466295 1 185839646 185862537 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541880 M 1557 0 1 "" HGDP01415 nsv548422 1 185839646 185862537 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173932 M 17421 0 1 "" HGDP01415 esv2653931 1 185857626 185864024 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5180043 M 1 0 1 "" NA18507 esv2463016 1 185859414 185863861 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5368645 M 1 0 1 "" NA18507 esv2331023 1 185860085 185863704 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4904053 M 1 0 1 "" NA18507 dgv483n100 1 185902024 186039832 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000114,nsv999763,nsv1011007,nsv1000470 M 29084 0 5 "" esv1129778 1 185902332 185902332 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3841967 M 2 1 0 "" HuRef esv2764264 1 185907837 186039844 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006731,essv7006730 M 1109 0 2 "" RW_0006,RW_0504 nsv516534 1 185912515 186021648 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv685705,nssv668934 M 2026 0 2 "" nsv521863 1 185928153 186050561 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694105 M 2026 1 0 "" nsv466306 1 185947981 185970440 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541888 M 1557 0 1 "" HGDP00155 nsv548423 1 185947981 185970440 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173933 M 17421 0 1 "" HGDP00155 nsv548424 1 185951967 185981542 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730164 M 17421 0 1 "" nsv3910 1 185972752 185990377 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3590 M 9 0 1 "" NA12878 nsv548425 1 185980063 185991940 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730165 M 17421 0 1 "" dgv669n54 1 185981817 185988653 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548426,nsv548429,nsv548434,nsv548433 M 17421 7 0 "" nsv436401 1 185981956 185991078 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465867 M 2 0 1 "" NA18505 esv26901 1 185982371 185988901 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17290 M 40 0 14 "" NA07037,NA11894,NA11931,NA11995,NA12004,NA12006,NA12414,NA12749,NA12776,NA12828,NA12878,NA18505,NA18916,NA19225 nsv548427 1 185982790 185986567 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730169,nssv730168 M 17421 0 2 "" nsv548428 1 185982790 185986888 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730170,nssv730171 M 17421 2 0 "" dgv670n54 1 185982790 185988653 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548431,nsv548432 M 17421 6 413 "" dgv671n54 1 185982790 185988653 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548442,nsv548439,nsv548438,nsv548440,nsv548441,nsv548437,nsv548436,nsv548430,nsv548435 M 17421 0 61 "" nsv514024 1 185983120 185988960 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2852645,nssv2852723,nssv2852671,nssv2852738,nssv2852640,nssv2852720,nssv2852628,nssv2852735,nssv2852603,nssv2852730,nssv2852681,nssv2852731,nssv2852634,nssv2852734,nssv2852660,nssv2852722,nssv2852705,nssv2852717,nssv2852623,nssv2852725,nssv2852706,nssv2852714,nssv2852597,nssv2852716,nssv2852641,nssv2852726,nssv2852676,nssv2852724,nssv2852658,nssv2852729,nssv2852612,nssv2852715,nssv2852654,nssv2852727,nssv2852636,nssv2852737,nssv2852664,nssv2852719,nssv2852710,nssv2852728,nssv2852621,nssv2852721,nssv2852620,nssv2852733,nssv2852648,nssv2852732,nssv2852700,nssv2852739,nssv2852605,nssv2852718,nssv2852652,nssv2852713,nssv2852629,nssv2852736,nssv2852709,nssv2852649,nssv2852670,nssv2852602,nssv2852703,nssv2852667,nssv2852632,nssv2852639,nssv2852695,nssv2852607,nssv2852677,nssv2852624,nssv2852698,nssv2852601,nssv2852702,nssv2852610,nssv2852646,nssv2852613,nssv2852614,nssv2852618,nssv2852659,nssv2852650,nssv2852630,nssv2852707,nssv2852693,nssv2852617,nssv2852606,nssv2852635,nssv2852627,nssv2852657,nssv2852711,nssv2852656,nssv2852637,nssv2852608,nssv2852661,nssv2852689,nssv2852690,nssv2852701,nssv2852683,nssv2852682,nssv2852638,nssv2852684,nssv2852598,nssv2852674,nssv2852626,nssv2852696,nssv2852622,nssv2852616,nssv2852697,nssv2852668,nssv2852625,nssv2852642,nssv2852692,nssv2852651,nssv2852600,nssv2852687,nssv2852688,nssv2852653,nssv2852655,nssv2852643,nssv2852691,nssv2852708,nssv2852644,nssv2852609,nssv2852665,nssv2852604,nssv2852673,nssv2852611,nssv2852680,nssv2852662,nssv2852599,nssv2852669,nssv2852704,nssv2852679,nssv2852686,nssv2852672,nssv2852633,nssv2852619,nssv2852675,nssv2852712,nssv2852694,nssv2852678,nssv2852699,nssv2852685,nssv2852666,nssv2852647,nssv2852663,nssv2852615,nssv2852631 M 2366 0 143 "" NA06991,NA06993,NA06994,NA07000,NA07019,NA07034,NA07037,NA07048,NA07051,NA07056,NA07347,NA07348,NA07349,NA07357,NA10830,NA10835,NA10838,NA10839,NA10845,NA10846,NA10847,NA10855,NA10857,NA10859,NA10860,NA10863,NA10864,NA11830,NA11831,NA11832,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11994,NA11995,NA12004,NA12043,NA12044,NA12056,NA12144,NA12146,NA12155,NA12236,NA12248,NA12249,NA12264,NA12272,NA12273,NA12282,NA12283,NA12286,NA12335,NA12340,NA12341,NA12347,NA12375,NA12376,NA12383,NA12414,NA12485,NA12546,NA12708,NA12716,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12775,NA12776,NA12778,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18485,NA18489,NA18868,NA18869,NA18916,NA18923,NA18930,NA19101,NA19103,NA19138,NA19207,NA19225,NA21307,NA21312,NA21362,NA21381,NA21438,NA21439,NA21440,NA21442,NA21453,NA21454,NA21475,NA21477,NA21478,NA21485,NA21487,NA21488,NA21489,NA21608,NA21615 dgv672n54 1 185985252 185988653 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548443,nsv548444 M 17421 0 3 "" dgv673n54 1 185986154 185988653 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548446,nsv548445 M 17421 0 4 "" nsv508679 1 185988820 185996016 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617385 M 4 0 1 "" CHM nsv470751 1 185998240 186064204 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547796 M 443 1 0 "" HGDP00664 dgv674n54 1 185998240 186078647 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548448,nsv548447 M 17421 2 0 "" HGDP00658,HGDP00664 nsv466317 1 185998240 186078647 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541894 M 1557 1 0 "" HGDP00664 nsv466328 1 186012986 186049990 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541901 M 1557 0 1 "" 1780862358_A nsv548449 1 186012986 186049990 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173936 M 17421 0 1 "" 1780862358_A esv23035 1 186019107 186021405 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12995,esv17986 M 40 0 4 "" NA07045,NA11995,NA12156,NA19129 nsv548450 1 186020474 186021648 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730664 M 17421 0 1 "" nsv548451 1 186020508 186031126 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730665 M 17421 0 1 "" esv3367044 1 186073201 186073247 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7862111 M 185 1 0 "" NA12005 nsv832070 1 186076660 186258366 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441587 M 95 1 0 "" nsv999792 1 186133080 186158692 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704838 M 29084 0 1 "" nsv548452 1 186135099 186202913 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730666 M 17421 1 0 "" esv3357202 1 186160473 186160492 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597269 M 185 1 0 "" NA12873 nsv548453 1 186191949 186220935 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730667 M 17421 0 1 "" nsv474325 1 186200202 186200202 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012398 M 9 1 0 "" NA18507 esv22061 1 186205985 186214018 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19549 M 40 0 1 "" NA19114 nsv516633 1 186206616 186213763 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv681521,nssv669738,nssv679415,nssv697506,nssv689014 M 2026 1 4 "" esv3333379 1 186222012 186222035 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902103,essv8902104 M 185 2 0 "" NA18505,NA19147 esv3305082 1 186222016 186222017 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7745524,essv7752713 M 185 2 0 "" NA18505,NA19147 nsv466339 1 186259616 186284568 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541910 M 1557 0 1 "" HGDP00397 nsv548454 1 186259616 186284568 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173937 M 17421 0 1 "" HGDP00397 nsv832081 1 186289940 186444880 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441588 M 95 1 0 "" nsv1003096 1 186348584 186503789 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488084 M 29084 0 1 "" nsv548455 1 186352456 186499627 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730668 M 17421 0 1 "" nsv548456 1 186368676 186669593 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730669 M 17421 0 1 "" nsv1000343 1 186417274 186440409 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500370 M 29084 1 0 "" nsv474454 1 186420462 186420462 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012122 M 9 1 0 "" NA18956 nsv520044 1 186431028 186435729 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697193 M 2026 0 1 "" esv3307301 1 186441257 186441258 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7756629,essv7756771,essv7759929,essv7748862,essv7759657,essv7751320,essv7752609,essv7752460,essv7751762,essv7758050,essv7748506 M 185 11 0 "" NA07037,NA10851,NA11881,NA12761,NA12878,NA12891,NA12892,NA18571,NA18576,NA18638,NA19172 esv3347212 1 186441261 186441276 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673831,essv8673834,essv8673833 M 185 3 0 "" NA12878,NA12891,NA12892 esv3308460 1 186441264 186441265 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840513,essv7841143,essv7839787 M 185 3 0 "" NA12878,NA12891,NA12892 esv3423112 1 186453059 186453091 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902124,essv8902116,essv8902129,essv8902119,essv8902120,essv8902122,essv8902125,essv8902128,essv8902127,essv8902118,essv8902121,essv8902123,essv8902117 M 185 13 0 "" NA07037,NA10851,NA11894,NA12045,NA12144,NA12761,NA18571,NA18576,NA18605,NA18638,NA18856,NA18858,NA19147 esv3305777 1 186453069 186453070 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7784611,essv7805553,essv7779810,essv7814597,essv7835576,essv7795457,essv7772725,essv7825379,essv7801013,essv7772099,essv7790071,essv7803269,essv7808096,essv7802257,essv7804557,essv7772598,essv7813115 M 185 17 0 "" NA07037,NA10851,NA11894,NA12045,NA12144,NA12234,NA12761,NA12878,NA12891,NA12892,NA18571,NA18576,NA18605,NA18638,NA18856,NA18858,NA19147 esv3307958 1 186453072 186453073 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840541,essv7841267,essv7840262 M 185 3 0 "" NA12878,NA12891,NA12892 esv3441782 1 186453074 186453082 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673837,essv8673836,essv8673835 M 185 3 0 "" NA12878,NA12891,NA12892 nsv832093 1 186463731 186631007 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441589 M 95 0 1 "" esv2489885 1 186473911 186475388 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5248997 M 1 0 1 "" NA18507 nsv520507 1 186473980 186478715 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697460 M 2026 0 1 "" nsv548457 1 186484042 186580453 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730670 M 17421 0 1 "" nsv470752 1 186516795 186550462 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547797 M 443 0 1 "" HGDP01397 nsv548458 1 186516824 186646051 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730671 M 17421 0 1 "" nsv506966 1 186516973 186522973 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619253,nssv620672 M 4 0 0 "" NA10860,NA15510 nsv548459 1 186519319 186756837 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730672 M 17421 1 0 "" esv27092 1 186591641 186596938 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14559 M 40 0 1 "" NA12878 dgv675n54 1 186591727 186594353 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548461,nsv548460 M 17421 6 0 "" dgv676n54 1 186591727 186595166 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548462,nsv548463 M 17421 3 0 "" nsv508680 1 186626200 186644877 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618993 M 4 0 1 "" NA10860 nsv825653 1 186640752 186641190 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434209 M 31 1 0 "" NA18570 nsv825664 1 186642815 186643586 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434210 M 31 1 0 "" NA18570 nsv466361 1 186649088 186722032 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541921 M 1557 0 1 "" 1780862574_A nsv548464 1 186649088 186722032 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173938 M 17421 0 1 "" 1780862574_A nsv466372 1 186679368 186722548 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541931 M 1557 1 0 "" NINDS_272 nsv548465 1 186679368 186722548 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173939 M 17421 1 0 "" NINDS_272 nsv997844 1 186679368 186732191 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485621 M 29084 1 0 "" dgv677n54 1 186698442 186838019 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548467,nsv548466 M 17421 0 2 "" esv3439781 1 186704817 186704836 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597313,essv9597302,essv9597347,essv9597336,essv9597324 M 185 5 0 "" NA07346,NA12043,NA12815,NA12872,NA12873 esv3378734 1 186704829 186704833 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673838,essv8673840,essv8673839 M 185 3 0 "" NA12891,NA19239,NA19240 esv3340524 1 186704833 186704837 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902158,essv8902150,essv8902145,essv8902134,essv8902133,essv8902141,essv8902135,essv8902140,essv8902172,essv8902152,essv8902168,essv8902143,essv8902161,essv8902166,essv8902138,essv8902153,essv8902144,essv8902146,essv8902164,essv8902130,essv8902151,essv8902149,essv8902157,essv8902169,essv8902167,essv8902162,essv8902139,essv8902155,essv8902147,essv8902171,essv8902154,essv8902132,essv8902131,essv8902142,essv8902156,essv8902160,essv8902136,essv8902165,essv8902163,essv8902173,essv8902174 M 185 41 0 "" NA06986,NA07037,NA07346,NA07357,NA10847,NA10851,NA11830,NA11831,NA11919,NA11920,NA11994,NA11995,NA12043,NA12045,NA12249,NA12489,NA12716,NA12717,NA12749,NA12750,NA12761,NA12828,NA18489,NA18502,NA18507,NA18510,NA18520,NA18545,NA18550,NA18593,NA18871,NA18907,NA18947,NA18959,NA18960,NA18964,NA19093,NA19102,NA19137,NA19190,NA19257 nsv548468 1 186741046 186818032 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730684 M 17421 0 1 "" esv3390468 1 186758661 186758670 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863789 M 185 1 0 "" NA12005 nsv548469 1 186768771 186892969 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730685 M 17421 0 1 "" nsv548470 1 186803308 186806809 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv730686,nssv730687 M 17421 1 1 "" esv2561236 1 186805616 186807522 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5182378 M 1 0 1 "" NA18507 esv9071 1 186805826 186807091 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31512 M 1 0 0 "" nsv511723 1 186805872 186806997 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626367 M 1 0 1 "" 1 esv1917052 1 186805890 186807038 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4979091 M 1 0 1 "" NA18507 esv5133 1 186805990 186806984 CNV loss Wang_et_al_2008 18987735 Sequencing essv27574 M 1 0 1 "" YH esv1000153 1 186806026 186806987 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565370 M 3 0 1 "" HuRef esv1675641 1 186806079 186806854 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3763450 M 2 0 1 "" HuRef nsv159069 1 186806080 186806854 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177647 M 24 "" esv29759 1 186806093 186806859 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11209 M 40 6 0 "" NA07045,NA18517,NA18909,NA18916,NA19129,NA19225 nsv820674 1 186806093 186806859 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420791 M 1 0 1 "" NA10851 nsv548471 1 186806147 186806809 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv731706,nssv730843,nssv732098,nssv731703,nssv730837,nssv732097,nssv731980,nssv731673,nssv732019,nssv732086,nssv732083,nssv730861,nssv732020,nssv732106,nssv732090,nssv732189,nssv732099,nssv731674,nssv732100,nssv732105,nssv732101,nssv732143,nssv732102,nssv732119,nssv732104,nssv732103,nssv732276,nssv732463,nssv732107,nssv730836,nssv730695,nssv731959,nssv731967,nssv732109,nssv732108,nssv731080,nssv731114,nssv730867,nssv732117,nssv732110,nssv731960,nssv732118,nssv731089,nssv732111,nssv732113,nssv732112,nssv731716,nssv731730,nssv732116,nssv732114,nssv732115,nssv732133,nssv732125,nssv732018,nssv732122,nssv730835,nssv730834,nssv730933,nssv730832,nssv732121,nssv732120,nssv732142,nssv732123,nssv732124,nssv730697,nssv732126,nssv732132,nssv732131,nssv732128,nssv732127,nssv732130,nssv732129,nssv732137,nssv732134,nssv730935,nssv731986,nssv731987,nssv732141,nssv731079,nssv732136,nssv730833,nssv732135,nssv731707,nssv731708,nssv731077,nssv732140,nssv731073,nssv731078,nssv732138,nssv731075,nssv731074,nssv732139,nssv731076,nssv731082,nssv731639,nssv730838,nssv731966,nssv731759,nssv731961,nssv732144,nssv732188,nssv732147,nssv732158,nssv732148,nssv732145,nssv732153,nssv732146,nssv731081,nssv732149,nssv731670,nssv732152,nssv730842,nssv732151,nssv730841,nssv732150,nssv732154,nssv731832,nssv731692,nssv732157,nssv731084,nssv731088,nssv732155,nssv732156,nssv731083,nssv730840,nssv731797,nssv732161,nssv732160,nssv731965,nssv732159,nssv732187,nssv732162,nssv732165,nssv732164,nssv732170,nssv732163,nssv730839,nssv732167,nssv731156,nssv732169,nssv732166,nssv732168,nssv731675,nssv731087,nssv731086,nssv732172,nssv731831,nssv732171,nssv732176,nssv732186,nssv732174,nssv732173,nssv732175,nssv732178,nssv731240,nssv731085,nssv732177,nssv732185,nssv732181,nssv732180,nssv732179,nssv732183,nssv732184,nssv732182,nssv732209,nssv731718,nssv730853,nssv730844,nssv731981,nssv731974,nssv732193,nssv731985,nssv730852,nssv732194,nssv732190,nssv732198,nssv732192,nssv732191,nssv732228,nssv731091,nssv730860,nssv732275,nssv732197,nssv732196,nssv732195,nssv731972,nssv731717,nssv732208,nssv731973,nssv732201,nssv731090,nssv732199,nssv732200,nssv732207,nssv732203,nssv731705,nssv731704,nssv732202,nssv732206,nssv732204,nssv730866,nssv732205,nssv732212,nssv731098,nssv731720,nssv732210,nssv730845,nssv731970,nssv731979,nssv731971,nssv731097,nssv731631,nssv732217,nssv732227,nssv732211,nssv731092,nssv731729,nssv732216,nssv731721,nssv730851,nssv732214,nssv732213,nssv732215,nssv731969,nssv731093,nssv731968,nssv731719,nssv730846,nssv730849,nssv731096,nssv731630,nssv732219,nssv732218,nssv732226,nssv730848,nssv730850,nssv732221,nssv732222,nssv732220,nssv730847,nssv732223,nssv731095,nssv732224,nssv732225,nssv731094,nssv732274,nssv731726,nssv730854,nssv732234,nssv731629,nssv730859,nssv732233,nssv732229,nssv731982,nssv731984,nssv731112,nssv732232,nssv730855,nssv732239,nssv732248,nssv732231,nssv732230,nssv732238,nssv732237,nssv732236,nssv732235,nssv731102,nssv731722,nssv732240,nssv731978,nssv731103,nssv730865,nssv731099,nssv732243,nssv732244,nssv732242,nssv732247,nssv732241,nssv732245,nssv731724,nssv731725,nssv731100,nssv731723,nssv732246,nssv731101,nssv731628,nssv730856,nssv731976,nssv731977,nssv732252,nssv732273,nssv731728,nssv730864,nssv732249,nssv731983,nssv732260,nssv732251,nssv730858,nssv732250,nssv731108,nssv732253,nssv731727,nssv732255,nssv732254,nssv732259,nssv731106,nssv732256,nssv731107,nssv731111,nssv730857,nssv732258,nssv731105,nssv732257,nssv731104,nssv732261,nssv730862,nssv731113,nssv731110,nssv731975,nssv732272,nssv732265,nssv732264,nssv732263,nssv732262,nssv732267,nssv732266,nssv731109,nssv732271,nssv732268,nssv730863,nssv732270,nssv732269,nssv732001,nssv732279,nssv731633,nssv732000,nssv732015,nssv732278,nssv732284,nssv732082,nssv732277,nssv732017,nssv732280,nssv730869,nssv731732,nssv731740,nssv732283,nssv730871,nssv731999,nssv732281,nssv732282,nssv731118,nssv730868,nssv731990,nssv731731,nssv732320,nssv732285,nssv732286,nssv732296,nssv732289,nssv732295,nssv732288,nssv732287,nssv731758,nssv730870,nssv730900,nssv732290,nssv732292,nssv732294,nssv732291,nssv731638,nssv732293,nssv731635,nssv730932,nssv732305,nssv732298,nssv730872,nssv732299,nssv731734,nssv732297,nssv731733,nssv731989,nssv732319,nssv731632,nssv732301,nssv732304,nssv732300,nssv731115,nssv732303,nssv730934,nssv731117,nssv730881,nssv732302,nssv730876,nssv731988,nssv731155,nssv732306,nssv730873,nssv732307,nssv732308,nssv732310,nssv732309,nssv731116,nssv731137,nssv730874,nssv732318,nssv732311,nssv732314,nssv732313,nssv732312,nssv730875,nssv732317,nssv732315,nssv732316,nssv730890,nssv732344,nssv731997,nssv731634,nssv732324,nssv731129,nssv732016,nssv731121,nssv732322,nssv732321,nssv732323,nssv730884,nssv732327,nssv732331,nssv730883,nssv732325,nssv731120,nssv730879,nssv730899,nssv730878,nssv732364,nssv732462,nssv730877,nssv732326,nssv730880,nssv730882,nssv732330,nssv731119,nssv732329,nssv732328,nssv730886,nssv732334,nssv732332,nssv731993,nssv731122,nssv732333,nssv732337,nssv732343,nssv730885,nssv732335,nssv730889,nssv732336,nssv732342,nssv731124,nssv731123,nssv731735,nssv732339,nssv732338,nssv730888,nssv730887,nssv731125,nssv732340,nssv731128,nssv732341,nssv731127,nssv731126,nssv731135,nssv731992,nssv732350,nssv731131,nssv730894,nssv731998,nssv732365,nssv732345,nssv731995,nssv732363,nssv731736,nssv730898,nssv732346,nssv732347,nssv731738,nssv730893,nssv732349,nssv732348,nssv731136,nssv730891,nssv730892,nssv731130,nssv731996,nssv732353,nssv731991,nssv731737,nssv732352,nssv732357,nssv732362,nssv732351,nssv731134,nssv730897,nssv732355,nssv732356,nssv732354,nssv730895,nssv730896,nssv732358,nssv732359,nssv732361,nssv731994,nssv731132,nssv731739,nssv732360,nssv731133,nssv732011,nssv732002,nssv731757,nssv731636,nssv732413,nssv731143,nssv732368,nssv732013,nssv731154,nssv732366,nssv732014,nssv732367,nssv732369,nssv732461,nssv730907,nssv731139,nssv732374,nssv732371,nssv732370,nssv732372,nssv730913,nssv732383,nssv732373,nssv730903,nssv730906,nssv730902,nssv730901,nssv730931,nssv731746,nssv732378,nssv732382,nssv732377,nssv732375,nssv732376,nssv730905,nssv732380,nssv732379,nssv732381,nssv731138,nssv730904,nssv732393,nssv731637,nssv732412,nssv731745,nssv732384,nssv732386,nssv732385,nssv732387,nssv730908,nssv731142,nssv732392,nssv732388,nssv730912,nssv732391,nssv732390,nssv732389,nssv732398,nssv731141,nssv732395,nssv731744,nssv731741,nssv732394,nssv732404,nssv732396,nssv730911,nssv732397,nssv732411,nssv732400,nssv732399,nssv730909,nssv732402,nssv732403,nssv732401,nssv731140,nssv732406,nssv731743,nssv732405,nssv732410,nssv732409,nssv732407,nssv731742,nssv730910,nssv732408,nssv731748,nssv731153,nssv732007,nssv732415,nssv732003,nssv732010,nssv732430,nssv732012,nssv732414,nssv732440,nssv732418,nssv731147,nssv730919,nssv732416,nssv732460,nssv732417,nssv732424,nssv731144,nssv732422,nssv732419,nssv732423,nssv732421,nssv732420,nssv730930,nssv732004,nssv732427,nssv732429,nssv732006,nssv732425,nssv732426,nssv732428,nssv731747,nssv731146,nssv732431,nssv732439,nssv731752,nssv732434,nssv731756,nssv730914,nssv732433,nssv731751,nssv731145,nssv732432,nssv730918,nssv730917,nssv732435,nssv731750,nssv732438,nssv731749,nssv732437,nssv730915,nssv732436,nssv730916,nssv730923,nssv731755,nssv732441,nssv732442,nssv732009,nssv732446,nssv732459,nssv732443,nssv732445,nssv732450,nssv732444,nssv731149,nssv730929,nssv731148,nssv732448,nssv732447,nssv731152,nssv730920,nssv730922,nssv732449,nssv730921,nssv730928,nssv731754,nssv732008,nssv731151,nssv731753,nssv732458,nssv730924,nssv732454,nssv732451,nssv732453,nssv732452,nssv732457,nssv732456,nssv731150,nssv732455,nssv730927,nssv730926,nssv730925,nssv732465,nssv731782,nssv730936,nssv732084,nssv731828,nssv731669,nssv731830,nssv730960,nssv732080,nssv732087,nssv732479,nssv731786,nssv732085,nssv732504,nssv732464,nssv731157,nssv731760,nssv732478,nssv731644,nssv732468,nssv731796,nssv732467,nssv732466,nssv731072,nssv732475,nssv732469,nssv731005,nssv732474,nssv732477,nssv732471,nssv732470,nssv732472,nssv732473,nssv730694,nssv732476,nssv730696,nssv730978,nssv730938,nssv732483,nssv732043,nssv732480,nssv732042,nssv732046,nssv731772,nssv732481,nssv732482,nssv732503,nssv731160,nssv732490,nssv730946,nssv732487,nssv732485,nssv732486,nssv731671,nssv731781,nssv732484,nssv730937,nssv731239,nssv732489,nssv732488,nssv731774,nssv730939,nssv730945,nssv732027,nssv732502,nssv732492,nssv732491,nssv732497,nssv732495,nssv730944,nssv732494,nssv732493,nssv732496,nssv732498,nssv731672,nssv731773,nssv730940,nssv730943,nssv730941,nssv732501,nssv731159,nssv731192,nssv731174,nssv731158,nssv731161,nssv732499,nssv732500,nssv730942,nssv731771,nssv731765,nssv732506,nssv731162,nssv732508,nssv732023,nssv732026,nssv732505,nssv732507,nssv730959,nssv731163,nssv730951,nssv731761,nssv731166,nssv732509,nssv731173,nssv732510,nssv732511,nssv731763,nssv732022,nssv732021,nssv730947,nssv731165,nssv731762,nssv731764,nssv731164,nssv730949,nssv730950,nssv730948,nssv732024,nssv731172,nssv731766,nssv731168,nssv730954,nssv732025,nssv731167,nssv731770,nssv730953,nssv730958,nssv730952,nssv731171,nssv731767,nssv731769,nssv730957,nssv731768,nssv730956,nssv731169,nssv731170,nssv730955,nssv732041,nssv731780,nssv731177,nssv731785,nssv731776,nssv732044,nssv730964,nssv732045,nssv731783,nssv730963,nssv731004,nssv730983,nssv730977,nssv731775,nssv730962,nssv730961,nssv732030,nssv730970,nssv731183,nssv731176,nssv730965,nssv730969,nssv731643,nssv731175,nssv730971,nssv730976,nssv730968,nssv730967,nssv730966,nssv732029,nssv732028,nssv730973,nssv731640,nssv731178,nssv730982,nssv731182,nssv730972,nssv730981,nssv731181,nssv731191,nssv731179,nssv730980,nssv730974,nssv731180,nssv730979,nssv730975,nssv731642,nssv732038,nssv731784,nssv731185,nssv732039,nssv732040,nssv730989,nssv730994,nssv731779,nssv732034,nssv731190,nssv730987,nssv730984,nssv730986,nssv730988,nssv730985,nssv731777,nssv732031,nssv732033,nssv731184,nssv732032,nssv730992,nssv730990,nssv730993,nssv731003,nssv730991,nssv732037,nssv731778,nssv731186,nssv731189,nssv731002,nssv730995,nssv732035,nssv732036,nssv731641,nssv730997,nssv730996,nssv731000,nssv731188,nssv730998,nssv731187,nssv730999,nssv731001,nssv732077,nssv731794,nssv732047,nssv731044,nssv731015,nssv732078,nssv731668,nssv731667,nssv732081,nssv732079,nssv731019,nssv731802,nssv731007,nssv730693,nssv732060,nssv731648,nssv731014,nssv731006,nssv731827,nssv731009,nssv732053,nssv731008,nssv731012,nssv731829,nssv731011,nssv731013,nssv731010,nssv731795,nssv732049,nssv732052,nssv731016,nssv731206,nssv731198,nssv731018,nssv731194,nssv732048,nssv731193,nssv731071,nssv731199,nssv731798,nssv731238,nssv732051,nssv732050,nssv731197,nssv731017,nssv731196,nssv731195,nssv732054,nssv731793,nssv731043,nssv732059,nssv731201,nssv731029,nssv731020,nssv731205,nssv731028,nssv731021,nssv731801,nssv731022,nssv731200,nssv731027,nssv731787,nssv731024,nssv731023,nssv731025,nssv731026,nssv731202,nssv731034,nssv732058,nssv731789,nssv732055,nssv731800,nssv731792,nssv731204,nssv731033,nssv731042,nssv731032,nssv731031,nssv731030,nssv731799,nssv732056,nssv732057,nssv731036,nssv731788,nssv731035,nssv731791,nssv731041,nssv731790,nssv731040,nssv731039,nssv731203,nssv731037,nssv731038,nssv731219,nssv731047,nssv732062,nssv732076,nssv731805,nssv731056,nssv732075,nssv732073,nssv731645,nssv731646,nssv731647,nssv732061,nssv731825,nssv731046,nssv730692,nssv731804,nssv731209,nssv731208,nssv731070,nssv731207,nssv731803,nssv731045,nssv731826,nssv731813,nssv731807,nssv731212,nssv731048,nssv731049,nssv731806,nssv731812,nssv731211,nssv731218,nssv731210,nssv731050,nssv731055,nssv731054,nssv731809,nssv731213,nssv731811,nssv731808,nssv731217,nssv731810,nssv731051,nssv731216,nssv731215,nssv731053,nssv731052,nssv731214,nssv731068,nssv730691,nssv732072,nssv732074,nssv732071,nssv731060,nssv731236,nssv732064,nssv731220,nssv731069,nssv731823,nssv731058,nssv731237,nssv731059,nssv731057,nssv731824,nssv731816,nssv731814,nssv731818,nssv732063,nssv731061,nssv731062,nssv731067,nssv731063,nssv731817,nssv731815,nssv731065,nssv731066,nssv731064,nssv732065,nssv732066,nssv730688,nssv731821,nssv731223,nssv731222,nssv732070,nssv731822,nssv731221,nssv730690,nssv731820,nssv731229,nssv731224,nssv730689,nssv732069,nssv731234,nssv731228,nssv731819,nssv731225,nssv731226,nssv731227,nssv731235,nssv732068,nssv731230,nssv731233,nssv731231,nssv732067,nssv731232,nssv731837,nssv731676,nssv731684,nssv730724,nssv732093,nssv730831,nssv731252,nssv732095,nssv730761,nssv732094,nssv732096,nssv730760,nssv731649,nssv731666,nssv730829,nssv730704,nssv731681,nssv731682,nssv731835,nssv731245,nssv731244,nssv731281,nssv731243,nssv731242,nssv731241,nssv731251,nssv731250,nssv730703,nssv731249,nssv731247,nssv731246,nssv731248,nssv731253,nssv731265,nssv732091,nssv731851,nssv730702,nssv731255,nssv731258,nssv731259,nssv731254,nssv731257,nssv731256,nssv731262,nssv731834,nssv731836,nssv731693,nssv731264,nssv731261,nssv731843,nssv731260,nssv731702,nssv731280,nssv731263,nssv730701,nssv732088,nssv731888,nssv732089,nssv730700,nssv732005,nssv730699,nssv731709,nssv731269,nssv731853,nssv731266,nssv731268,nssv731267,nssv730698,nssv731272,nssv731833,nssv731279,nssv731271,nssv731270,nssv731715,nssv731958,nssv731274,nssv731962,nssv731273,nssv731275,nssv731277,nssv731278,nssv731276,nssv731307,nssv731283,nssv731842,nssv730706,nssv731844,nssv731850,nssv731282,nssv730723,nssv730713,nssv731288,nssv731285,nssv731841,nssv730705,nssv731284,nssv731286,nssv731342,nssv731287,nssv731306,nssv731838,nssv731292,nssv730712,nssv730707,nssv731296,nssv731291,nssv731840,nssv731289,nssv731290,nssv731295,nssv731294,nssv731293,nssv730711,nssv731839,nssv731627,nssv730709,nssv731445,nssv731302,nssv731301,nssv730708,nssv730710,nssv731297,nssv731299,nssv731300,nssv731298,nssv731303,nssv731304,nssv731305,nssv731320,nssv731849,nssv731341,nssv731847,nssv730715,nssv731310,nssv730722,nssv731308,nssv731309,nssv730714,nssv731343,nssv731846,nssv731319,nssv731314,nssv731311,nssv731313,nssv731312,nssv731845,nssv731318,nssv731317,nssv731315,nssv731316,nssv731321,nssv731327,nssv731848,nssv731340,nssv730721,nssv730717,nssv731323,nssv731322,nssv730716,nssv731326,nssv731325,nssv731324,nssv731328,nssv731332,nssv731339,nssv730720,nssv731331,nssv731330,nssv731329,nssv731338,nssv730718,nssv730719,nssv731337,nssv731336,nssv731333,nssv731335,nssv731334,nssv731395,nssv731856,nssv731866,nssv731683,nssv731887,nssv730739,nssv730728,nssv730753,nssv731362,nssv730759,nssv731444,nssv731344,nssv731345,nssv731346,nssv731347,nssv731350,nssv730727,nssv731691,nssv731855,nssv731677,nssv731349,nssv731348,nssv731361,nssv731854,nssv730726,nssv731353,nssv731352,nssv731351,nssv731360,nssv731852,nssv730725,nssv731359,nssv731354,nssv731358,nssv731355,nssv731357,nssv731356,nssv731364,nssv731394,nssv731366,nssv731363,nssv730731,nssv731865,nssv730738,nssv731365,nssv730730,nssv731376,nssv731375,nssv731374,nssv731367,nssv730729,nssv731369,nssv731368,nssv731370,nssv731373,nssv731372,nssv731371,nssv731382,nssv731378,nssv731859,nssv731864,nssv731377,nssv730737,nssv731381,nssv731858,nssv731857,nssv731380,nssv731379,nssv731393,nssv730733,nssv731392,nssv731387,nssv731863,nssv731860,nssv731384,nssv731383,nssv730736,nssv731386,nssv730732,nssv731385,nssv730735,nssv731388,nssv731390,nssv730734,nssv731862,nssv731861,nssv731391,nssv731389,nssv731680,nssv731679,nssv730747,nssv731872,nssv731886,nssv730740,nssv731678,nssv730758,nssv730752,nssv731396,nssv731399,nssv731411,nssv730746,nssv731397,nssv730741,nssv731398,nssv731410,nssv731402,nssv731443,nssv730745,nssv731871,nssv730742,nssv731401,nssv731400,nssv731404,nssv731868,nssv731870,nssv731867,nssv731403,nssv731409,nssv730744,nssv730743,nssv731869,nssv731406,nssv731408,nssv731407,nssv731405,nssv731885,nssv730751,nssv731874,nssv730748,nssv731417,nssv731413,nssv731412,nssv730757,nssv731416,nssv731415,nssv731414,nssv731423,nssv731873,nssv731418,nssv731442,nssv731420,nssv731430,nssv731419,nssv731422,nssv731421,nssv731429,nssv731428,nssv731424,nssv731427,nssv731426,nssv731425,nssv731876,nssv731433,nssv731884,nssv731880,nssv731431,nssv730756,nssv730750,nssv731432,nssv731875,nssv731441,nssv731437,nssv731434,nssv731879,nssv731877,nssv731436,nssv731878,nssv731435,nssv731883,nssv730749,nssv731882,nssv731439,nssv731438,nssv730755,nssv730754,nssv731881,nssv731440,nssv731688,nssv730764,nssv730793,nssv731910,nssv731895,nssv730777,nssv732092,nssv730766,nssv731963,nssv731957,nssv730790,nssv731596,nssv730770,nssv731701,nssv730830,nssv730828,nssv731695,nssv731446,nssv731689,nssv731447,nssv730763,nssv731714,nssv731690,nssv731476,nssv731449,nssv730765,nssv731450,nssv731448,nssv731710,nssv731530,nssv731453,nssv731452,nssv730762,nssv731451,nssv731892,nssv731889,nssv731605,nssv731956,nssv730771,nssv730769,nssv731456,nssv731463,nssv731626,nssv730776,nssv731687,nssv730768,nssv731457,nssv731455,nssv731454,nssv731459,nssv730767,nssv731891,nssv731890,nssv731462,nssv731458,nssv731461,nssv731460,nssv731893,nssv731474,nssv730772,nssv731894,nssv730775,nssv731464,nssv731465,nssv731475,nssv731469,nssv731473,nssv731466,nssv730773,nssv730774,nssv731468,nssv731467,nssv731472,nssv731470,nssv731471,nssv731909,nssv731899,nssv731503,nssv730780,nssv731665,nssv731694,nssv731477,nssv730792,nssv731484,nssv731597,nssv730789,nssv731478,nssv731483,nssv731686,nssv731479,nssv731482,nssv731480,nssv731529,nssv731481,nssv731491,nssv731486,nssv731898,nssv730779,nssv731485,nssv731488,nssv731490,nssv731487,nssv731489,nssv731498,nssv731897,nssv731502,nssv730778,nssv731492,nssv731501,nssv731495,nssv731494,nssv731493,nssv731496,nssv731497,nssv731896,nssv731650,nssv731500,nssv731499,nssv731598,nssv731519,nssv730788,nssv731901,nssv731908,nssv730781,nssv731511,nssv731528,nssv731504,nssv731510,nssv730791,nssv731509,nssv731508,nssv731507,nssv731506,nssv731505,nssv731604,nssv731512,nssv731900,nssv731603,nssv731685,nssv731518,nssv731517,nssv731513,nssv731514,nssv731515,nssv731516,nssv731527,nssv731907,nssv731903,nssv731523,nssv731522,nssv731521,nssv731902,nssv731520,nssv730787,nssv731602,nssv731906,nssv731904,nssv731524,nssv730786,nssv730782,nssv731601,nssv731526,nssv730785,nssv731600,nssv731905,nssv731599,nssv731525,nssv730784,nssv730783,nssv731548,nssv730811,nssv731619,nssv731713,nssv731917,nssv731537,nssv731964,nssv730803,nssv731953,nssv731919,nssv731954,nssv730797,nssv730812,nssv730827,nssv731610,nssv730796,nssv731700,nssv730826,nssv731536,nssv731531,nssv731698,nssv731651,nssv731621,nssv730795,nssv730794,nssv731534,nssv731614,nssv731664,nssv731532,nssv731533,nssv731696,nssv731535,nssv731547,nssv731913,nssv731611,nssv731538,nssv730802,nssv731930,nssv731539,nssv731541,nssv731540,nssv731561,nssv731912,nssv731911,nssv731609,nssv731606,nssv731613,nssv731595,nssv730798,nssv731608,nssv731916,nssv731546,nssv730801,nssv731915,nssv731607,nssv731914,nssv730800,nssv731542,nssv731543,nssv730799,nssv731544,nssv731612,nssv731545,nssv731549,nssv731620,nssv730808,nssv730805,nssv731929,nssv731920,nssv730807,nssv731615,nssv731560,nssv731553,nssv730810,nssv731918,nssv730806,nssv731697,nssv731552,nssv730804,nssv731550,nssv731551,nssv731625,nssv731924,nssv731559,nssv731928,nssv731555,nssv731616,nssv731554,nssv731923,nssv731618,nssv730809,nssv731617,nssv731922,nssv731921,nssv731927,nssv731558,nssv731556,nssv731557,nssv731926,nssv731925,nssv731942,nssv731938,nssv730818,nssv731936,nssv731572,nssv731955,nssv731563,nssv731622,nssv730822,nssv731663,nssv730817,nssv731937,nssv731655,nssv731624,nssv731594,nssv731562,nssv731623,nssv730825,nssv731712,nssv731699,nssv731566,nssv731652,nssv730816,nssv731941,nssv731654,nssv731564,nssv730815,nssv731565,nssv731571,nssv731570,nssv731931,nssv731935,nssv730813,nssv731653,nssv730814,nssv731567,nssv731934,nssv731569,nssv731933,nssv731568,nssv731932,nssv731945,nssv731574,nssv731656,nssv731952,nssv731951,nssv730819,nssv731573,nssv730824,nssv730821,nssv731939,nssv731944,nssv731593,nssv731582,nssv731943,nssv731940,nssv731711,nssv731578,nssv731575,nssv731657,nssv731577,nssv731576,nssv731580,nssv731662,nssv731579,nssv731581,nssv731948,nssv731659,nssv731946,nssv731585,nssv731950,nssv731661,nssv730820,nssv730823,nssv731658,nssv731592,nssv731947,nssv731584,nssv731583,nssv731591,nssv731587,nssv731586,nssv731949,nssv731660,nssv731589,nssv731590,nssv731588 M 17421 1 1823 "" nsv548472 1 186806147 186818032 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732512 M 17421 0 1 "" nsv511138 1 186806151 186820222 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624932 M 1 0 1 "" 1 nsv548473 1 186806303 186806809 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732513 M 17421 0 1 "" esv3426999 1 186815194 186815213 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597358 M 185 1 0 "" NA11931 nsv548474 1 186815628 186907840 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732514 M 17421 0 1 "" nsv520438 1 186838019 186914210 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv671412,nssv673941 M 2026 0 2 "" nsv1008537 1 186857874 187239305 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496745 M 29084 0 1 "" esv3307267 1 186882542 186882543 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7784114,essv7805509,essv7833825,essv7778003,essv7787267,essv7805595,essv7788273,essv7782175,essv7803541,essv7824944,essv7820182,essv7830991,essv7813821,essv7786454,essv7782831,essv7822752,essv7827029,essv7810400,essv7821031,essv7797049,essv7794757,essv7833113,essv7772864,essv7814698,essv7818850,essv7788818,essv7791232,essv7827764,essv7801320,essv7783780,essv7822578,essv7803265,essv7775884,essv7785502,essv7818576,essv7794228,essv7799038 M 185 37 0 "" NA06986,NA07037,NA07051,NA11831,NA11993,NA12003,NA12006,NA12717,NA12750,NA12814,NA12828,NA18505,NA18507,NA18532,NA18547,NA18555,NA18558,NA18561,NA18564,NA18571,NA18572,NA18573,NA18592,NA18593,NA18608,NA18638,NA18858,NA18870,NA18916,NA18945,NA18948,NA18951,NA19099,NA19114,NA19141,NA19147,NA19257 esv3348505 1 186882546 186882565 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597369 M 185 1 0 "" NA19141 esv3339477 1 186882551 186882563 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902201,essv8902197,essv8902183,essv8902182,essv8902200,essv8902180,essv8902206,essv8902194,essv8902202,essv8902185,essv8902175,essv8902188,essv8902195,essv8902205,essv8902176,essv8902199,essv8902212,essv8902209,essv8902179,essv8902193,essv8902186,essv8902198,essv8902190,essv8902177,essv8902210,essv8902207,essv8902178,essv8902184,essv8902204,essv8902191,essv8902211,essv8902187,essv8902189,essv8902208,essv8902196 M 185 35 0 "" NA06986,NA07037,NA07051,NA11831,NA11993,NA12003,NA12006,NA12717,NA12750,NA12828,NA18505,NA18507,NA18532,NA18547,NA18555,NA18558,NA18561,NA18564,NA18571,NA18572,NA18573,NA18592,NA18593,NA18608,NA18638,NA18858,NA18870,NA18916,NA18945,NA18948,NA18951,NA19099,NA19114,NA19147,NA19257 nsv478688 1 186898737 186898737 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011097 M 9 1 0 "" NA18507 nsv1006749 1 186905346 186968224 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491641 M 29084 1 0 "" esv3450141 1 186925968 186925984 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673841 M 185 1 0 "" NA19239 esv3309316 1 186925972 186925973 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838898 M 185 1 0 "" NA19238 nsv470753 1 186950065 187117484 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547798 M 443 0 1 "" HGDP01199 esv2762410 1 186972380 187388340 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7003323,essv7003334,essv7003345 M 1109 0 3 "" SW_0183,SW_0632,SW_1400 dgv45n27 1 187001959 187149660 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466428,nsv466450,nsv466417,nsv466439 M 1557 0 4 "" 1782681169_A,HGDP00092,HGDP00948,HGDP01199 dgv678n54 1 187001959 187149660 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548475,nsv548480,nsv548479,nsv548476,nsv548478,nsv548477 M 17421 0 7 "" 1782681169_A,HGDP00092,HGDP00948,HGDP01199 esv3890882 1 187013019 187587641 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788248,essv25789169 M 3017 2 0 "" nsv508054 1 187024249 187030249 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621485,nssv622302,nssv624228,nssv618516 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 nsv519541 1 187027251 187069165 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696909 M 2026 0 1 "" nsv548481 1 187054013 187154983 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732518 M 17421 0 1 "" esv3373695 1 187066067 187066106 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863790 M 185 1 0 "" NA18520 nsv466461 1 187069165 187198451 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542002 M 1557 0 1 "" HGDP00143 nsv548482 1 187069165 187198451 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173944 M 17421 0 1 "" HGDP00143 nsv548483 1 187069165 187938851 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732519 M 17421 0 1 "" esv3423978 1 187099453 187099472 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597391,essv9597402,essv9597424,essv9597413,essv9597380 M 185 5 0 "" NA11840,NA11881,NA12812,NA12814,NA12874 esv1493683 1 187099473 187099473 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4092292 M 2 1 0 "" HuRef nsv947457 1 187104123 187131074 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2759338 M 97 0 1 "" HGDP01307 nsv1002943 1 187106385 187391644 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487932 M 29084 1 0 "" dgv21n21 1 187117397 187233979 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv526242,nsv517867 M 2026 0 2 "" dgv679n54 1 187149660 187356191 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548485,nsv548484 M 17421 0 2 "" nsv520309 1 187167768 187198451 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697339 M 2026 1 0 "" nsv1000175 1 187199650 187241830 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483021 M 29084 1 0 "" nsv998458 1 187208688 187239305 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499083 M 29084 0 1 "" nsv1009984 1 187213730 187304487 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489701 M 29084 0 1 "" dgv680n54 1 187233979 187383793 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548486,nsv548487,nsv548488 M 17421 0 3 "" dgv484n100 1 187241830 187308382 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001419,nsv998116,nsv999208,nsv1012876,nsv1005646,nsv998129,nsv999887,nsv1004781 M 29084 0 19 "" esv3405409 1 187247415 187247447 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902216,essv8902213,essv8902217,essv8902215 M 185 4 0 "" NA18870,NA18916,NA19138,NA19147 esv3303246 1 187247426 187247427 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7746874,essv7745598,essv7756232,essv7743159 M 185 4 0 "" NA18870,NA18916,NA19138,NA19147 esv26996 1 187250900 187304747 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9999 M 40 0 1 "" NA18907 nsv1013923 1 187260569 187295600 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704839 M 29084 0 1 "" nsv516989 1 187261219 187295821 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv686696,nssv663717,nssv675301,nssv658943,nssv678891,nssv681795,nssv684062,nssv656605,nssv693225,nssv684158,nssv654370,nssv685022,nssv671281,nssv653563,nssv671254,nssv672974,nssv657759,nssv664098,nssv702010,nssv685262,nssv677977,nssv667276 M 2026 0 22 "" esv7458 1 187261316 187262167 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29899 M 1 0 0 "" esv1953788 1 187261387 187262103 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4847135 M 1 0 1 "" NA18507 esv4046 1 187261536 187262000 CNV loss Wang_et_al_2008 18987735 Sequencing essv26487 M 1 0 1 "" YH esv1005299 1 187261571 187261905 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577446 M 3 0 1 "" HuRef esv1203223 1 187261587 187261922 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3813978 M 2 0 1 "" HuRef nsv999435 1 187264491 188115744 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500220 M 29084 0 1 "" nsv548489 1 187288032 187354732 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732525 M 17421 0 1 "" esv2421613 1 187293846 187297986 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5093246,essv5074374,essv5147405,essv5062166,essv5046156,essv5049883,essv5130022,essv5110575,essv5049272,essv5154182,essv5137794,essv5106588,essv5069558 M 1184 0 13 "" NA10839,NA10847,NA11830,NA12005,NA12146,NA12829,NA19035,NA19095,NA20760,NA21479,NA21480,NA21693,NA21717 esv2764226 1 187293846 187299103 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006734,essv7006732 M 1109 0 2 "" RW_0215,RW_0639 nsv441725 1 187293847 187297986 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656822,nssv1656823,nssv1656825,nssv1656821,nssv1656824 M 270 0 5 "" NA10839,NA10847,NA11830,NA12005,NA12146 nsv514025 1 187294224 187298000 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2852746,nssv2852745,nssv2852747,nssv2852743,nssv2852750,nssv2852741,nssv2852749,nssv2852744,nssv2852748,nssv2852742,nssv2852740 M 2366 0 11 "" NA10839,NA10847,NA11830,NA12005,NA12146,NA12829,NA18907,NA19095,NA21479,NA21480,NA21717 nsv825675 1 187294581 187295150 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426427 M 31 1 0 "" AK6 dgv46n27 1 187294778 187394747 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466494,nsv466472,nsv466483 M 1557 0 3 "" HGDP00213,HGDP00734,NINDS_44 dgv681n54 1 187294778 187394747 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548494,nsv548492,nsv548491,nsv548490 M 17421 0 4 "" HGDP00213,HGDP00734,NINDS_44 esv2126916 1 187299432 187299873 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4772813 M 1 0 1 "" NA18507 esv1003838 1 187299613 187299673 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569533 M 3 0 1 "" HuRef esv1420472 1 187299654 187299715 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3629856 M 2 0 1 "" HuRef nsv506967 1 187308845 187314845 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619254 M 4 0 0 "" NA10860 nsv548493 1 187316640 187577281 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732527 M 17421 0 1 "" esv2750818 1 187320829 187745063 CNV gain Pinto_et_al_2007 17911159 SNP array essv6981583,essv6981584,essv6988423,essv6981585,essv6981586 M 771 5 0 "" BEC_303 esv2750819 1 187330954 187604620 CNV gain Pinto_et_al_2007 17911159 SNP array essv6985676,essv6981834 M 771 2 0 "" BEC_492 esv27295 1 187338531 187344221 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11717 M 40 0 1 "" NA18907 nsv1009389 1 187345960 187510772 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704840 M 29084 0 1 "" dgv17n17 1 187350141 187367330 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437260,nsv437259 M 60 0 2 "" NA18854,NA18914 dgv485n100 1 187350179 187365872 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007671,nsv1007811,nsv1010640,nsv1009086,nsv1009556,nsv1000206,nsv1006108,nsv1001605,nsv1006338,nsv998252 M 29084 0 16 "" dgv682n54 1 187350799 187513878 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548495,nsv548496,nsv548499 M 17421 0 3 "" esv2130515 1 187351411 187352042 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4732683 M 1 0 1 "" NA18507 dgv486n100 1 187351938 187388328 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007849,nsv1007638 M 29084 0 2 "" nsv999130 1 187351938 187403074 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499898 M 29084 0 1 "" nsv441726 1 187353623 187359115 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656826,nssv1656831,nssv1656829,nssv1656828,nssv1656827,nssv1656830 M 270 0 6 "" NA18521,NA18522,NA18852,NA18854,NA18912,NA18914 nsv466506 1 187353840 187356191 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542036 M 1557 0 1 "" HGDP00907 nsv516535 1 187353840 187356191 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv659106,nssv685805,nssv685684,nssv668968 M 2026 0 4 "" nsv548497 1 187353840 187356191 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173949,nssv1173948 M 17421 0 2 "" HGDP00907,HGDP01413 nsv818644 1 187353840 187356191 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417822,nssv1417821 M 112 0 2 "" NA18852,NA18854 nsv548498 1 187353840 187758025 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732530 M 17421 0 1 "" nsv514026 1 187354640 187359072 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2852754,nssv2852753,nssv2852757,nssv2852751,nssv2852758,nssv2852752,nssv2852760,nssv2852755,nssv2852756,nssv2852761,nssv2852759 M 2366 0 11 "" NA18522,NA18852,NA18854,NA21387,NA21389,NA21391,NA21439,NA21447,NA21488,NA21490,NA21581 nsv946544 1 187367869 187368369 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810638,nssv1810690,nssv1810637,nssv1810672,nssv1810651,nssv1810685,nssv1810642,nssv1810684,nssv1810717,nssv1810702,nssv1810646,nssv1810697,nssv1810640,nssv1810668,nssv1810650,nssv1810698,nssv1810661,nssv1810705,nssv1810715,nssv1810659,nssv1810712,nssv1810688,nssv1810653,nssv1812262,nssv1810649,nssv1810686,nssv1810634,nssv1810658,nssv1810657,nssv1810719,nssv1810644,nssv1810669,nssv1810713,nssv1810692,nssv1810641,nssv1810682,nssv1810660,nssv1810700,nssv1810643,nssv1812264,nssv1810635,nssv1810655,nssv1810716,nssv1810665,nssv1810709,nssv1812261,nssv1810718,nssv1810708,nssv1810711,nssv1810687,nssv1810656,nssv1812260,nssv1810639,nssv1810699,nssv1810654,nssv1810691,nssv1810645,nssv1812263,nssv1810652,nssv1810676,nssv1810648,nssv1810670,nssv1810633,nssv1812268,nssv1810663,nssv1810678,nssv1810710,nssv1810703,nssv1810714,nssv1812267,nssv1810636,nssv1810701,nssv1810647,nssv1810689,nssv1810666,nssv1812265,nssv1810671,nssv1810706,nssv1810632,nssv1810704,nssv1810667,nssv1810679,nssv1812266,nssv1810707,nssv1810681,nssv1810674,nssv1810696,nssv1810695,nssv1810680,nssv1810673,nssv1810683,nssv1810677,nssv1810664,nssv1810693,nssv1810694,nssv1810675,nssv1810662 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1001359 1 187391350 187485991 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704841 M 29084 0 1 "" esv2762034 1 187402865 187720167 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7003356 M 1109 1 0 "" SW_1077 dgv487n100 1 187413679 187449469 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008796,nsv1001724 M 29084 0 3 "" dgv488n100 1 187425884 187486636 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999358,nsv1005279 M 29084 0 2 "" nsv998330 1 187442841 187510772 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704844 M 29084 0 1 "" nsv521180 1 187448048 187505288 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv687626,nssv683912 M 2026 0 2 "" dgv489n100 1 187481072 187608683 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997551,nsv1013496,nsv999695,nsv1012005 M 29084 0 4 "" dgv490n100 1 187491485 187881277 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014923,nsv1006590,nsv1009494 M 29084 0 5 "" dgv491n100 1 187495136 187592960 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012579,nsv1010440 M 29084 0 3 "" dgv683n54 1 187501871 187617323 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548501,nsv548500 M 17421 0 2 "" nsv8569 1 187510157 187513781 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23397 M 31 0 1 "" NA19240 esv29027 1 187510432 187514219 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12839 M 40 0 4 "" NA18861,NA18916,NA19114,NA19240 esv2758982 1 187513156 187915951 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756873,esv2757763 M 270 0 7 "" NA18542,NA18545,NA18552,NA18562,NA18967,NA18975,NA18981 esv3413352 1 187513639 187513652 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673842,essv8673844 M 185 2 0 "" NA12878,NA12891 esv3310345 1 187513646 187513647 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840209,essv7840474 M 185 2 0 "" NA12878,NA12891 esv3303652 1 187513648 187513649 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7779459,essv7782817,essv7805627,essv7819857,essv7830219,essv7801339,essv7796505,essv7807739,essv7796970,essv7784397,essv7776959,essv7787260,essv7829149,essv7820597,essv7783425,essv7791246,essv7781532,essv7793564,essv7811497,essv7770691,essv7817965,essv7822269,essv7823300,essv7833877,essv7830366,essv7792512,essv7814479,essv7774988,essv7822952,essv7770164,essv7825063,essv7814903,essv7836148,essv7818721,essv7788077,essv7789453,essv7834627,essv7770922,essv7787541,essv7820957,essv7824712,essv7826605,essv7802408,essv7815234,essv7802874,essv7814003,essv7776350,essv7807915,essv7833291,essv7812321,essv7785345,essv7779852,essv7777277,essv7790138,essv7795774,essv7824105,essv7827813,essv7809092,essv7788717,essv7803404,essv7804554,essv7817314,essv7800463,essv7835332,essv7799316,essv7808263,essv7828645,essv7807107,essv7813488,essv7820269,essv7772348,essv7784684,essv7819263,essv7780870,essv7773563,essv7775546,essv7797584,essv7817532,essv7794201,essv7802028,essv7789133 M 185 81 0 "" NA06986,NA07037,NA07051,NA07347,NA07357,NA10847,NA10851,NA11830,NA11831,NA11840,NA11881,NA11918,NA11919,NA11920,NA11931,NA11992,NA11993,NA11995,NA12003,NA12045,NA12144,NA12234,NA12249,NA12287,NA12716,NA12717,NA12749,NA12750,NA12751,NA12761,NA12763,NA12776,NA12814,NA12815,NA12828,NA12874,NA12878,NA12891,NA18501,NA18502,NA18505,NA18517,NA18523,NA18532,NA18537,NA18542,NA18547,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18570,NA18572,NA18573,NA18576,NA18577,NA18593,NA18603,NA18605,NA18608,NA18609,NA18638,NA18853,NA18870,NA18871,NA18907,NA18909,NA18940,NA18942,NA18948,NA18961,NA18965,NA18969,NA18970,NA18980,NA19093,NA19147,NA19257 esv3404538 1 187513653 187513664 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902220,essv8902233,essv8902240,essv8902293,essv8902279,essv8902229,essv8902224,essv8902277,essv8902221,essv8902295,essv8902247,essv8902234,essv8902269,essv8902262,essv8902236,essv8902280,essv8902228,essv8902297,essv8902245,essv8902253,essv8902271,essv8902287,essv8902294,essv8902242,essv8902252,essv8902290,essv8902257,essv8902231,essv8902273,essv8902288,essv8902258,essv8902219,essv8902283,essv8902218,essv8902286,essv8902276,essv8902239,essv8902250,essv8902230,essv8902238,essv8902241,essv8902284,essv8902246,essv8902289,essv8902243,essv8902249,essv8902261,essv8902255,essv8902275,essv8902251,essv8902282,essv8902260,essv8902235,essv8902291,essv8902266,essv8902256,essv8902265,essv8902264,essv8902232,essv8902268,essv8902227,essv8902285,essv8902272,essv8902223,essv8902274,essv8902263,essv8902278,essv8902254,essv8902244,essv8902267,essv8902296,essv8902222 M 185 72 0 "" NA06986,NA07037,NA07051,NA07347,NA07357,NA10847,NA10851,NA11830,NA11831,NA11881,NA11918,NA11919,NA11920,NA11931,NA11992,NA11993,NA11995,NA12003,NA12045,NA12144,NA12249,NA12287,NA12716,NA12717,NA12749,NA12750,NA12751,NA12761,NA12763,NA12776,NA12828,NA18501,NA18502,NA18505,NA18517,NA18523,NA18532,NA18537,NA18542,NA18547,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18570,NA18572,NA18573,NA18576,NA18577,NA18593,NA18603,NA18605,NA18608,NA18609,NA18638,NA18853,NA18870,NA18871,NA18907,NA18909,NA18940,NA18942,NA18948,NA18961,NA18965,NA18980,NA19093,NA19147,NA19257 esv1469745 1 187513662 187513662 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4302511 M 2 1 0 "" HuRef nsv466517 1 187531372 187584244 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542045 M 1557 0 1 "" HGDP00472 nsv548502 1 187531372 187584244 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173950 M 17421 0 1 "" HGDP00472 dgv684n54 1 187538960 187722935 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548503,nsv548504 M 17421 0 2 "" esv3436241 1 187559205 187559223 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902301,essv8902299,essv8902298,essv8902304,essv8902300,essv8902302 M 185 6 0 "" NA18507,NA18519,NA18523,NA18856,NA19099,NA19225 esv3306806 1 187559210 187559211 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7747860,essv7742116,essv7749261,essv7751555,essv7753314,essv7754979 M 185 6 0 "" NA18507,NA18519,NA18523,NA18856,NA19099,NA19225 esv1961007 1 187560116 187560527 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4855650 M 1 0 1 "" NA18507 dgv685n54 1 187568534 187810199 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548510,nsv548512,nsv548509,nsv548511,nsv548508,nsv548507,nsv548505,nsv548506 M 17421 0 9 "" 1780862003_A,HGDP01097,HGDP01221,HGDP01288,HGDP01324 dgv9e55 1 187584244 187803966 CNV loss Pinto_et_al_2007 17911159 SNP array esv34476,esv34856,esv34572,esv34831,esv34517,esv34601 M 771 0 16 "" NA18542,NA18552,NA18562,NA18967,NA18975,NA18981 esv3890860 1 187587641 187810199 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25793672,essv25797496,essv25799929,essv25780517,essv25800743,essv25797647,essv25786714,essv25784873,essv25801219,essv25786331,essv25801645,essv25780379,essv25779954,essv25782166,essv25782107,essv25796354,essv25787082,essv25800906,essv25801379,essv25781520,essv25778452,essv25796866,essv25785566,essv25778433,essv25787606,essv25796340,essv25783340,essv25785470,essv25800260,essv25797079,essv25799349,essv25782608,essv25778820,essv25781885,essv25781386,essv25785492,essv25785215,essv25799895,essv25782920,essv25786606,essv25801624,essv25787721,essv25787138,essv25800777,essv25796821,essv25779235,essv25785575,essv25797394,essv25783386,essv25797817,essv25785376,essv25783688,essv25779820,essv25783252,essv25779115,essv25799995,essv25779839,essv25784430,essv25785498,essv25796109,essv25781583,essv25779066,essv25796521,essv25778755,essv25798955,essv25799407,essv25796889,essv25782417,essv25800116,essv25780863,essv25797729,essv25800177,essv25797476,essv25796756,essv25779989,essv25797507,essv25797579,essv25780774,essv25786294,essv25781536,essv25780230,essv25781077,essv25800845,essv25780254,essv25784473,essv25784286,essv25783609,essv25783795,essv25781073,essv25801340,essv25782835,essv25785752,essv25782784,essv25779902,essv25798127,essv25800249,essv25785004,essv25779968,essv25781381,essv25778645,essv25798806,essv25783865,essv25780930,essv25778844,essv25785588,essv25783965,essv25785660,essv25785545,essv25801593,essv25796894,essv25785328,essv25785035,essv25781439,essv25784705,essv25779544,essv25799508,essv25799365,essv25801453,essv25785138,essv25796503,essv25780004,essv25799939,essv25797924,essv25781804,essv25790402,essv25780753,essv25797740,essv25779279,essv25782902,essv25779480,essv25798959,essv25801099,essv25783745,essv25782173,essv25778410,essv25784496,essv25799589,essv25786172,essv25799530,essv25785605,essv25779351,essv25782278,essv25780086,essv25781918,essv25800131,essv25779186,essv25783304,essv25801076,essv25779318,essv25786284,essv25801245,essv25782986,essv25782088,essv25780304,essv25784638,essv25801664,essv25800353,essv25785231,essv25800388,essv25798266,essv25785528,essv25778929,essv25780893,essv25794153,essv25799538,essv25801362,essv25778557,essv25801190,essv25800031,essv25798973,essv25783732,essv25796746 M 3017 0 172 "" nsv8580 1 187592141 187811572 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv26711,nssv22426,nssv23390 M 31 1 2 "" NA12155,NA18552,NA18975 nsv825686 1 187592429 187810947 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422402,nssv1436373 M 31 0 2 "" NA18542,NA18552 esv2421925 1 187592960 187810199 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5063265,essv5146478,essv5078526,essv5158877,essv5151080,essv5103107,essv5071189,essv5040633,essv5131558,essv5063692,essv5150416,essv5026478 M 1184 0 12 "" NA17977,NA18101,NA18154,NA18158,NA18542,NA18552,NA18562,NA18954,NA18967,NA18975,NA18981,NA19002 nsv442526 1 187593758 187719766 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619196,nssv1619195,nssv1619198,nssv1619194,nssv1619197,nssv1619199 M 270 0 6 "" NA18542,NA18552,NA18562,NA18967,NA18975,NA18981 nsv514027 1 187595936 187717552 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2852762,nssv2852766,nssv2852764,nssv2852767,nssv2852763,nssv2852765 M 2366 0 6 "" NA18542,NA18552,NA18562,NA18967,NA18975,NA18981 esv3890871 1 187604620 187715198 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787400,essv25796883,essv25801564,essv25783463,essv25800464 M 3017 0 5 "" dgv47n27 1 187615085 187810199 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466539,nsv466528,nsv466550,nsv466561 M 1557 0 4 "" 1780862003_A,HGDP01097,HGDP01221,HGDP01288 nsv470755 1 187617323 187790275 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544371 M 443 1 0 "" HGDP00544 nsv470754 1 187617323 187810199 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544367,nssv544368,nssv544370,nssv547799,nssv544369 M 443 0 5 "" HGDP00716,HGDP01186,HGDP01221,HGDP01305,HGDP01323 nsv818655 1 187617323 187810199 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417149 M 112 0 1 "" NA18542 dgv22n21 1 187617323 187866774 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv523001,nsv520867 M 2026 0 5 "" nsv999354 1 187645042 187760647 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500122 M 29084 0 1 "" dgv686n54 1 187665261 187746901 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548515,nsv548513 M 17421 0 2 "" HGDP01186 nsv466572 1 187665261 187746901 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542087 M 1557 0 1 "" HGDP01186 dgv492n100 1 187665520 187860925 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012568,nsv999995,nsv1008127,nsv1002848 M 29084 0 6 "" nsv466583 1 187668301 187793884 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542096 M 1557 0 1 "" HGDP01189 nsv548514 1 187668301 187793884 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173957 M 17421 0 1 "" HGDP01189 nsv474974 1 187676842 187676842 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017043 M 9 1 0 "" NA18956 esv2764219 1 187680860 187704820 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006737,essv7006736,essv7006735 M 1109 0 3 "" RW_0073,RW_0158,RW_0623 dgv687n54 1 187685127 187855962 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548516,nsv548518,nsv548517 M 17421 0 3 "" dgv688n54 1 187701977 187809352 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548519,nsv548520,nsv548521 M 17421 0 3 "" HGDP00100,HGDP01323 nsv1007247 1 187710945 187819494 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704851 M 29084 0 1 "" dgv48n27 1 187715199 187809352 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466617,nsv466605,nsv466594 M 1557 0 3 "" HGDP00100,HGDP00716,HGDP01323 nsv1005975 1 187719332 187772151 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704852 M 29084 0 1 "" nsv474271 1 187772236 187772236 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017392 M 9 1 0 "" NA18507 esv3890893 1 187789366 187847262 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787063,essv25783320 M 3017 0 2 "" nsv1004742 1 187793222 187918658 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704853 M 29084 0 1 "" esv1102427 1 187797944 187797944 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3837312 M 2 1 0 "" HuRef nsv466628 1 187815034 187866774 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542129 M 1557 0 1 "" HGDP00208 nsv548522 1 187815034 187866774 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173960 M 17421 0 1 "" HGDP00208 nsv825698 1 187818575 187843728 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428060 M 31 0 1 "" AK10 esv3395643 1 187832100 187832115 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863791 M 185 1 0 "" NA12005 nsv1011437 1 187846513 187909065 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704854 M 29084 0 1 "" nsv947458 1 187854739 187858492 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2760148 M 97 0 1 "" HGDP01284 esv28166 1 187855815 187856298 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18854 M 40 0 1 "" NA18907 dgv493n100 1 187871235 187915138 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005245,nsv1012902 M 29084 2 0 "" nsv8591 1 187884118 187886886 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23999 M 31 0 1 "" NA18942 nsv470756 1 187897346 187935615 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544372 M 443 1 0 "" HGDP01228 dgv689n54 1 187897346 187944854 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548528,nsv548529,nsv548525,nsv548524,nsv548523 M 17421 0 6 "" dgv690n54 1 187897346 187990113 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548527,nsv548526 M 17421 0 2 "" esv2413913 1 187928118 187928528 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4890614 M 1 0 1 "" NA18507 esv1737270 1 187928342 187928409 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4303664 M 2 0 1 "" HuRef nsv548530 1 187931480 188042398 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732553 M 17421 1 0 "" nsv946545 1 187931648 187934040 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1812291,nssv1812320,nssv1812288,nssv1812361,nssv1812276,nssv1812303,nssv1812298,nssv1812308,nssv1812282,nssv1812326,nssv1812277,nssv1812360,nssv1812354,nssv1812327,nssv1812293,nssv1812310,nssv1812287,nssv1812331,nssv1812351,nssv1812356,nssv1812273,nssv1812365,nssv1812279,nssv1812321,nssv1812347,nssv1812341,nssv1812355,nssv1812335,nssv1812286,nssv1812269,nssv1812274,nssv1812338,nssv1812346,nssv1812316,nssv1812271,nssv1812343,nssv1812278,nssv1812307,nssv1812348,nssv1812359,nssv1812349,nssv1812314,nssv1812297,nssv1812332,nssv1812350,nssv1812334,nssv1812284,nssv1812345,nssv1812281,nssv1812336,nssv1812272,nssv1812358,nssv1812300,nssv1812325,nssv1812352,nssv1812312,nssv1812283,nssv1812324,nssv1812353,nssv1812323,nssv1812280,nssv1812364,nssv1812290,nssv1812337,nssv1812275,nssv1812329,nssv1812285,nssv1812342,nssv1812270,nssv1812311,nssv1812294,nssv1812313,nssv1812289,nssv1812362,nssv1812330,nssv1812333,nssv1812328,nssv1812319,nssv1812309,nssv1812306,nssv1812299,nssv1812363,nssv1812340,nssv1812305,nssv1812357,nssv1812322,nssv1812301,nssv1812339,nssv1812292,nssv1812315,nssv1812295,nssv1812317,nssv1812344,nssv1812302,nssv1812304,nssv1812296,nssv1812318 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv3921 1 187935028 188077261 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7919,nssv3600 M 9 0 2 "" NA12156,NA12878 esv2764254 1 187950807 188021411 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006738,essv7006739 M 1109 0 2 "" RW_0297,RW_0640 esv3335860 1 187964875 187964901 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863792 M 185 1 0 "" NA12005 nsv466683 1 187965237 188004012 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542165 M 1557 0 1 "" HGDP00942 nsv548531 1 187965237 188004012 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173961 M 17421 0 1 "" HGDP00942 nsv498698 1 187971130 188049982 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585412 M 9 0 1 "" esv22589 1 187971861 188052717 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15213,esv21130,esv17561 M 40 1 2 "" NA12878,NA18517,NA18907 nsv433190 1 187973248 188047656 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463071 M 9 0 1 "" NA12878 nsv437313 1 187974590 188046154 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467194 M 60 0 1 "" NA12878 nsv438115 1 187978794 188048192 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469541,nssv469563,nssv469552,nssv469574 M 269 0 2 "" NA12878,NA12892 nsv818667 1 187984282 188048192 CNV loss Wang_et_al_2007 17921354 SNP array nssv1416123,nssv1416124 M 112 0 2 "" NA12878,NA12892 nsv1013668 1 187988429 188096860 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704857 M 29084 0 1 "" nsv522081 1 188003456 188004012 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694855 M 2026 0 1 "" esv2758983 1 188003456 188086110 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756874 M 270 0 2 "" NA12878,NA12892 nsv548532 1 188025395 188638294 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732554 M 17421 1 0 BRINP3 nsv519337 1 188030378 188043864 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694324 M 2026 1 0 "" dgv49n27 1 188031476 188039770 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466705,nsv466694 M 1557 0 2 "" 1780862459_A,NINDS_101 dgv691n54 1 188031476 188039770 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548534,nsv548533 M 17421 0 2 "" 1780862459_A dgv692n54 1 188033562 188039770 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548535,nsv548537 M 17421 0 2 "" NINDS_101 nsv466716 1 188033562 188047656 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542192 M 1557 0 1 "" NINDS_106 nsv548536 1 188033562 188047656 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173964 M 17421 0 1 "" NINDS_106 nsv548538 1 188034003 188042398 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732557 M 17421 0 1 "" nsv548539 1 188035804 188053181 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732558 M 17421 0 1 "" nsv1015065 1 188036240 188076795 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498371 M 29084 0 1 "" nsv548540 1 188037441 188042398 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732559 M 17421 0 1 "" nsv517396 1 188037441 188043864 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv691245,nssv704565,nssv685473,nssv692109,nssv663295,nssv660367,nssv682737,nssv661361,nssv686196,nssv654489,nssv699237,nssv672205,nssv693047,nssv652097,nssv679917,nssv685023,nssv672975,nssv682510,nssv686697,nssv658182,nssv664246,nssv675140,nssv664328,nssv673135,nssv703103,nssv659973,nssv690062,nssv659107,nssv653908,nssv683233,nssv662585,nssv686826,nssv682339 M 2026 6 27 "" nsv818678 1 188037441 188043864 CNV loss Wang_et_al_2007 17921354 SNP array nssv1416626,nssv1416628 M 112 0 2 "" NA19116,NA19119 nsv466728 1 188037441 188046252 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542200 M 1557 0 1 "" HGDP00927 nsv548541 1 188037441 188046252 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732560 M 17421 0 1 "" nsv466739 1 188038628 188039770 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542206 M 1557 0 1 "" HGDP00473 nsv548542 1 188038628 188039770 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173965 M 17421 0 1 "" HGDP00473 esv2421356 1 188038628 188043864 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5140309,essv5043327,essv5085976,essv5018192,essv5097221,essv5004109,essv5134571,essv5146770,essv5105521,essv5101703,essv5097870,essv5105205,essv5141131,essv5077304 M 1184 0 14 "" NA12878,NA12892,NA18518,NA18519,NA18912,NA19035,NA19101,NA19116,NA19119,NA19127,NA19128,NA19247,NA19249,NA19779 esv2760085 1 188041268 188042840 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006740,essv7006741 M 1109 0 2 "" RW_0234,RW_0346 nsv8602 1 188043418 188053310 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26179 M 31 1 0 "" NA18517 nsv520978 1 188043864 188052456 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697719 M 2026 1 0 "" nsv470757 1 188046252 188074666 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544373 M 443 0 1 "" HGDP00879 nsv548543 1 188052456 188108139 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732561 M 17421 1 0 "" nsv825709 1 188052737 188053432 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437978 M 31 1 0 "" NA18951 esv1237537 1 188054081 188054161 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3614533 M 2 0 1 "" HuRef nsv8613 1 188057076 188072581 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23077,nssv22417 M 31 0 2 "" NA11830,NA18860 esv2762203 1 188102143 188107141 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006742 M 1109 0 1 "" RW_0211 nsv516072 1 188102143 188145217 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689230,nssv659097,nssv666025 M 2026 0 3 "" nsv1006448 1 188102143 188147146 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497861,nssv3704858 M 29084 0 2 "" nsv548544 1 188132035 188190746 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732562 M 17421 0 1 "" nsv1008189 1 188142597 188193206 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704859 M 29084 1 0 "" esv3304748 1 188149957 188149958 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7784807,essv7822734,essv7773072,essv7810472,essv7835601,essv7796692,essv7793748,essv7773491,essv7770541,essv7830892,essv7792907,essv7779217,essv7806560,essv7777305,essv7808192,essv7819216,essv7807486,essv7802046,essv7788493,essv7789399,essv7794066,essv7795857,essv7773721,essv7797377,essv7821824,essv7833465,essv7772460,essv7827406 M 185 28 0 "" NA06986,NA07347,NA10847,NA11829,NA11830,NA11831,NA11918,NA11919,NA11920,NA11931,NA11992,NA12044,NA12144,NA12489,NA12761,NA12763,NA12815,NA18542,NA18552,NA18563,NA18571,NA18576,NA18945,NA18948,NA18952,NA18960,NA18964,NA18965 esv3324675 1 188149963 188149976 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902316,essv8902321,essv8902311,essv8902313,essv8902331,essv8902318,essv8902312,essv8902322,essv8902309,essv8902306,essv8902327,essv8902330,essv8902323,essv8902319,essv8902324,essv8902326,essv8902307,essv8902308,essv8902315,essv8902329,essv8902317,essv8902328,essv8902310,essv8902305,essv8902320,essv8902332 M 185 26 0 "" NA06986,NA10847,NA11829,NA11830,NA11831,NA11918,NA11919,NA11920,NA11931,NA11992,NA12044,NA12144,NA12489,NA12761,NA12763,NA18542,NA18552,NA18563,NA18571,NA18576,NA18945,NA18948,NA18952,NA18960,NA18964,NA18965 esv3444017 1 188149963 188149982 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597480,essv9597491 M 185 2 0 "" NA07347,NA12815 nsv508055 1 188169223 188175223 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618517 M 4 0 0 "" CHM nsv473618 1 188170476 188170476 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020540 M 9 1 0 "" NA19129 esv6730 1 188211445 188211655 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29171 M 1 0 0 "" esv2758984 1 188225729 188261835 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756875 M 270 0 4 "" NA18532,NA18561,NA18573,NA18944 esv2226258 1 188227774 188228187 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4804953 M 1 0 1 "" NA18507 esv35062 1 188236966 188251966 CNV loss Pinto_et_al_2007 17911159 SNP array essv6988202,essv6979582 M 771 0 2 "" NA18573 nsv441727 1 188236989 188253049 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656835,nssv1656834,nssv1656832,nssv1656833 M 270 0 4 "" NA18532,NA18561,NA18573,NA18944 nsv1007424 1 188236991 188251090 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492699 M 29084 1 0 "" esv2762035 1 188236991 188253049 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7003367 M 1109 0 1 "" SW_1232 nsv8624 1 188242496 188251062 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22107 M 31 0 1 "" NA19132 nsv832104 1 188256771 188453331 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441590 M 95 1 0 BRINP3 dgv494n100 1 188264255 188323178 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012448,nsv1011414,nsv1005260,nsv1014714 M 29084 0 8 "" esv2750820 1 188264680 188318734 CNV loss Pinto_et_al_2007 17911159 SNP array essv6981914,essv6989542 M 771 0 2 "" BEC_501 esv1068626 1 188269479 188269479 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4174688 M 2 1 0 "" HuRef nsv506968 1 188271434 188277434 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619255,nssv617544,nssv620673 M 4 0 0 "" CHM,NA10860,NA15510 nsv825720 1 188273908 188274403 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431856 M 31 1 0 "" AK20 nsv518715 1 188276324 188309329 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696166 M 2026 0 1 "" dgv693n54 1 188302763 188346359 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548546,nsv548545 M 17421 0 2 BRINP3 esv2762036 1 188309329 188358644 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7003378 M 1109 1 0 BRINP3 SW_0057 esv2510247 1 188318805 188321334 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5164364 M 1 0 1 "" NA18507 esv2249912 1 188319131 188320687 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4789387 M 1 0 1 "" NA18507 dgv694n54 1 188329834 188382985 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548547,nsv548548,nsv548550,nsv548549 M 17421 0 4 BRINP3 nsv161162 1 188349585 188349654 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179740 M 24 BRINP3 esv2764208 1 188389818 188409828 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006746,essv7006747,essv7006743 M 1109 0 3 BRINP3 RW_0170,RW_0232,RW_0607 nsv1003035 1 188389818 188558177 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488015 M 29084 1 0 BRINP3 nsv3932 1 188414363 188448644 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3611 M 9 1 0 BRINP3 NA12878 nsv1007121 1 188530211 188572137 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704861 M 29084 0 1 BRINP3 dgv90n67 1 188576412 188578377 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825731,nsv825742 M 31 0 4 BRINP3 AK14,AK18,AK6,NA18949 nsv480844 1 188605499 188605499 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019955 M 9 0 0 BRINP3 esv2762204 1 188628077 188636592 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006748 M 1109 0 1 BRINP3 RW_0234 dgv495n100 1 188630831 188674797 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011611,nsv1001280 M 29084 0 2 BRINP3 esv24408 1 188643382 188648109 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17886 M 40 1 0 BRINP3 NA07045 dgv50n27 1 188700036 188762630 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466750,nsv466772 M 1557 0 2 BRINP3 HGDP00088,HGDP00963 dgv695n54 1 188700036 188762630 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548551,nsv548553 M 17421 0 2 BRINP3 HGDP00088,HGDP00963 nsv548552 1 188700036 188811906 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732569 M 17421 0 1 BRINP3 nsv470758 1 188722749 188776626 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544374 M 443 0 1 "" HGDP01222 nsv548554 1 188725387 188762630 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732570 M 17421 0 1 "" nsv548555 1 188770589 188809934 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732571 M 17421 0 1 "" esv275092 1 188796113 188827385 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586131 M 1250 0 1 "" nsv523002 1 188798265 188882260 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698674 M 2026 0 1 LOC440704 nsv998846 1 188801889 188829166 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499501 M 29084 1 0 "" nsv1001216 1 188815152 189337246 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484411 M 29084 0 1 LOC440704 esv3890904 1 188847995 188890633 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785678,essv25796078 M 3017 0 2 LOC440704 esv2074455 1 188864441 188864860 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4939031 M 1 0 1 LOC440704 NA18507 esv1455241 1 188864661 188864725 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4367341 M 2 0 1 LOC440704 HuRef nsv997479 1 188875774 189654970 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704862 M 29084 1 0 LOC440704 nsv508681 1 188899807 188904272 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622781 M 4 0 1 LOC440704 NA18994 nsv466783 1 188902403 188946473 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542249 M 1557 0 1 LOC440704 NINDS_94 nsv548556 1 188902403 188946473 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173968 M 17421 0 1 LOC440704 NINDS_94 nsv548557 1 188902403 188975767 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732572 M 17421 0 1 LOC440704 esv26660 1 188905023 188913430 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12516 M 40 1 0 LOC440704 NA12156 nsv470759 1 188917072 188946473 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544375 M 443 1 0 LOC440704 HGDP01301 dgv696n54 1 188918156 188954476 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548563,nsv548558 M 17421 0 4 LOC440704 HGDP00090,HGDP00154,HGDP00189 dgv697n54 1 188920135 188985655 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548569,nsv548564,nsv548566,nsv548565,nsv548559 M 17421 0 5 LOC440704 NINDS_147 dgv698n54 1 188920135 189016404 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548567,nsv548570,nsv548560 M 17421 0 5 LOC440704 nsv548561 1 188920135 189079912 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732579,nssv732578 M 17421 0 2 LOC440704 nsv524018 1 188921943 188948447 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699879 M 2026 0 1 LOC440704 nsv548562 1 188921943 188963665 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732580 M 17421 0 1 LOC440704 dgv51n27 1 188925052 188954476 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466872,nsv466850,nsv466861 M 1557 0 3 LOC440704 HGDP00090,HGDP00154,HGDP00189 nsv466883 1 188930912 188985655 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542333 M 1557 0 1 LOC440704 NINDS_147 dgv699n54 1 188930912 189040452 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548568,nsv548572,nsv548571 M 17421 0 3 LOC440704 1780862202_A nsv1012075 1 188936305 188976743 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492253 M 29084 0 1 LOC440704 nsv466916 1 188942159 189036417 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542354 M 1557 0 1 LOC440704 1780862202_A nsv466927 1 188950886 188985655 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542365 M 1557 0 1 LOC440704 HGDP00003 nsv548573 1 188950886 188985655 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173974 M 17421 0 1 LOC440704 HGDP00003 nsv508056 1 188974297 188980297 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621486 M 4 0 0 LOC440704 NA15510 nsv832115 1 188981293 189134568 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441592,nssv1441591,nssv1441593 M 95 0 3 LOC440704 nsv832126 1 188982063 189140621 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441594,nssv1441595 M 95 1 1 LOC440704 nsv1011043 1 188986632 189073973 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704863 M 29084 0 1 LOC440704 nsv526834 1 189036417 189040452 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703191 M 2026 1 0 LOC440704 esv1755755 1 189063283 189063283 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4345819 M 2 1 0 "" HuRef nsv825753 1 189080321 189080855 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423165 M 31 1 0 "" NA18999 esv5406 1 189103890 189104171 CNV loss Wang_et_al_2008 18987735 Sequencing essv27847 M 1 0 1 "" YH esv1740573 1 189103945 189104116 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4182932 M 2 0 1 "" HuRef nsv548574 1 189113886 189162214 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732588 M 17421 0 1 "" nsv1013809 1 189128096 189288794 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495252 M 29084 0 1 "" nsv1002498 1 189137861 189426373 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704864 M 29084 1 0 "" esv3370578 1 189141062 189141081 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597535,essv9597524,essv9597513,essv9597502 M 185 4 0 "" NA11931,NA12249,NA12812,NA12873 nsv508682 1 189142050 189182667 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618994 M 4 0 1 "" NA10860 nsv548575 1 189163482 189219622 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732589 M 17421 0 1 "" nsv506969 1 189173229 189179229 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623287 M 4 0 0 "" NA18994 esv2963 1 189177067 189177570 CNV loss Wang_et_al_2008 18987735 Sequencing essv25404 M 1 0 1 "" YH esv3890915 1 189188342 189289216 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25791321 M 3017 1 0 "" esv1565959 1 189218748 189218846 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4036805 M 2 0 1 "" HuRef dgv496n100 1 189219622 189275047 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999691,nsv1014195 M 29084 0 2 "" nsv548576 1 189230483 189616237 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732590 M 17421 1 0 "" esv2762205 1 189261362 189272489 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006749 M 1109 0 1 "" RW_0114 nsv472514 1 189316890 189316890 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011774 M 9 1 0 "" NA18555 nsv825764 1 189317790 189323329 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1425540 M 31 1 0 "" AK4 nsv478055 1 189352153 189352153 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013028 M 9 1 0 "" NA18517 esv1145096 1 189355341 189355341 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4220325 M 2 1 0 "" HuRef nsv946546 1 189380563 189383178 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808168,nssv1808247,nssv1812369,nssv1808183,nssv1808165,nssv1808228,nssv1808238,nssv1808219,nssv1808240,nssv1808195,nssv1808162,nssv1808203,nssv1808174,nssv1808200,nssv1812368,nssv1808224,nssv1808167,nssv1808191,nssv1808178,nssv1808201,nssv1808179,nssv1808216,nssv1808170,nssv1808212,nssv1808185,nssv1808227,nssv1808175,nssv1808194,nssv1808188,nssv1808244,nssv1808166,nssv1808251,nssv1808234,nssv1808248,nssv1808243,nssv1808207,nssv1808164,nssv1808204,nssv1808186,nssv1808246,nssv1808235,nssv1808198,nssv1808172,nssv1808221,nssv1808241,nssv1808192,nssv1808163,nssv1808230,nssv1808242,nssv1808226,nssv1808177,nssv1808252,nssv1808236,nssv1808193,nssv1808169,nssv1808199,nssv1808239,nssv1808250,nssv1808171,nssv1808205,nssv1808173,nssv1808233,nssv1808181,nssv1808206,nssv1808176,nssv1808253,nssv1808182,nssv1808213,nssv1808237,nssv1808196,nssv1808161,nssv1808225,nssv1812367,nssv1808217,nssv1808208,nssv1808214,nssv1808180,nssv1808218,nssv1808245,nssv1808231,nssv1808249,nssv1808197,nssv1808210,nssv1808222,nssv1808189,nssv1808202,nssv1808209,nssv1808220,nssv1808211,nssv1808229,nssv1808215,nssv1812366,nssv1808190,nssv1808232,nssv1808187,nssv1808223,nssv1808184 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3890926 1 189400412 189417682 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785970 M 3017 0 1 "" nsv3943 1 189415800 189460670 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7927 M 9 0 1 "" NA12156 nsv548577 1 189462423 189988086 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732591 M 17421 0 1 "" esv3890937 1 189487529 189616237 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787665,essv25786309 M 3017 0 2 "" nsv1012211 1 189503140 189649122 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492794 M 29084 1 0 "" nsv548578 1 189514509 189576428 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732592 M 17421 1 0 "" nsv1007919 1 189547939 189889053 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494679 M 29084 0 1 "" dgv700n54 1 189553314 189659146 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548579,nsv548581 M 17421 0 2 "" nsv548580 1 189553597 189745105 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732594 M 17421 0 1 "" nsv999137 1 189566094 189608481 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499903 M 29084 1 0 "" nsv470761 1 189567753 189659146 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544376 M 443 1 0 "" HGDP01226 dgv701n54 1 189567754 189696846 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548582,nsv548583 M 17421 0 3 "" nsv160872 1 189590608 189597774 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179450 M 24 "" nsv470762 1 189616236 189696846 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544378 M 443 0 1 "" HGDP01216 nsv818689 1 189616237 189638488 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417276 M 112 1 0 "" NA18593 dgv702n54 1 189695104 189757896 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548584,nsv548587,nsv548588 M 17421 0 4 "" nsv466961 1 189695104 189772596 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542397 M 1557 1 0 "" HGDP00885 nsv548585 1 189695104 189772596 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173975 M 17421 1 0 "" HGDP00885 nsv548586 1 189695104 189787929 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732601 M 17421 0 1 "" nsv946548 1 189718051 189718646 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1808929,nssv1808872,nssv1808925,nssv1808876,nssv1808916,nssv1808947,nssv1808902,nssv1808943,nssv1808912,nssv1808948,nssv1808911,nssv1808945,nssv1808930,nssv1808878,nssv1808914,nssv1808941,nssv1808917,nssv1808891,nssv1808938,nssv1808949,nssv1808934,nssv1808885,nssv1808920,nssv1808901,nssv1808918,nssv1808879,nssv1808908,nssv1808875,nssv1808910,nssv1808887,nssv1808897,nssv1808940,nssv1808933,nssv1808884,nssv1808919,nssv1808873,nssv1808927,nssv1808946,nssv1808909,nssv1808881,nssv1808936,nssv1808877,nssv1808922,nssv1808882,nssv1808907,nssv1808899,nssv1808926,nssv1808898,nssv1808924,nssv1808892,nssv1808931,nssv1808883,nssv1808937,nssv1808895,nssv1808915,nssv1808880,nssv1808904,nssv1808890,nssv1808935,nssv1808888,nssv1808893,nssv1808942,nssv1808906,nssv1808255,nssv1808921,nssv1808886,nssv1808254,nssv1808894,nssv1808932,nssv1808874,nssv1808923,nssv1808889,nssv1808896,nssv1808944,nssv1808928,nssv1808913,nssv1808900,nssv1808905,nssv1808939,nssv1808903 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2750821 1 189726451 189888415 CNV gain Pinto_et_al_2007 17911159 SNP array essv6983932,essv6983933,essv6987448 M 771 3 0 "" BEC_735 nsv470763 1 189729097 189787929 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544379 M 443 0 1 "" HGDP00890 esv2542984 1 189743611 189744534 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5338076 M 1 1 0 "" NA18507 esv3338958 1 189744073 189744085 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902411,essv8902410,essv8902438,essv8902406,essv8902426,essv8902421,essv8902434,essv8902435,essv8902397,essv8902423,essv8902428,essv8902427,essv8902400,essv8902409,essv8902408,essv8902439,essv8902420,essv8902398,essv8902413,essv8902430,essv8902418,essv8902437,essv8902401,essv8902433,essv8902402,essv8902415,essv8902432,essv8902405,essv8902422,essv8902424,essv8902404,essv8902416,essv8902407,essv8902399,essv8902431,essv8902417,essv8902419,essv8902429,essv8902412 M 185 39 0 "" NA12043,NA12045,NA12154,NA12716,NA12717,NA12761,NA18498,NA18499,NA18501,NA18504,NA18505,NA18507,NA18508,NA18510,NA18519,NA18520,NA18522,NA18526,NA18563,NA18566,NA18572,NA18577,NA18579,NA18603,NA18853,NA18858,NA18861,NA18871,NA18907,NA18951,NA18956,NA18959,NA19093,NA19108,NA19114,NA19172,NA19190,NA19225,NA19257 esv3376397 1 189744078 189744089 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673849,essv8673850,essv8673848 M 185 3 0 "" NA19238,NA19239,NA19240 nsv519339 1 189748055 189844015 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696800 M 2026 0 1 "" nsv1006621 1 189749663 189779851 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704866 M 29084 0 1 "" esv1155637 1 189812612 189812674 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3855175 M 2 0 1 "" HuRef nsv160380 1 189812613 189812674 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178958 M 24 "" nsv548589 1 189813197 189903597 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732604 M 17421 0 1 "" esv3364583 1 189835503 189835513 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673851 M 185 1 0 "" NA19239 esv3310400 1 189835505 189835506 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837016 M 185 1 0 "" NA19239 esv3376605 1 189835506 189835536 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902442,essv8902441,essv8902440 M 185 3 0 "" NA18522,NA19099,NA19102 esv3304615 1 189835508 189835509 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758356,essv7750264,essv7753317,essv7755861 M 185 4 0 "" NA18522,NA19099,NA19102,NA19239 nsv1007060 1 189843926 190408448 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491540 M 29084 1 0 RGS18 esv3325064 1 189847386 189847415 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673853,essv8673855,essv8673852,essv8673856 M 185 4 0 "" NA12878,NA12891,NA12892,NA19238 esv3307962 1 189847387 189847388 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838663,essv7836861,essv7837350 M 185 3 0 "" NA19238,NA19239,NA19240 esv3303797 1 189847390 189847391 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7787876,essv7829562,essv7834013,essv7811362,essv7811568,essv7830439,essv7827857,essv7783513,essv7802612,essv7781441,essv7797489,essv7796844,essv7776781,essv7816086,essv7794061,essv7828046,essv7777529,essv7786606,essv7813443,essv7787996,essv7789249,essv7781737,essv7799021,essv7778246,essv7822072,essv7832053,essv7824846,essv7808463,essv7819261,essv7770478,essv7784058,essv7795968,essv7809356,essv7785011,essv7805019,essv7835331,essv7773920,essv7820451,essv7817025,essv7809688,essv7790027,essv7824494,essv7797802,essv7823736,essv7827027,essv7808791,essv7782712,essv7803796,essv7771240,essv7780219,essv7800761,essv7815343,essv7812466,essv7819833,essv7789494,essv7820847 M 185 56 0 "" NA07346,NA10847,NA10851,NA11829,NA11831,NA11918,NA11920,NA11931,NA11992,NA11993,NA11994,NA11995,NA12003,NA12006,NA12045,NA12154,NA12155,NA12156,NA12249,NA12287,NA12414,NA12716,NA12751,NA12761,NA12763,NA12872,NA12873,NA12878,NA12891,NA12892,NA18499,NA18517,NA18523,NA18550,NA18558,NA18564,NA18566,NA18570,NA18576,NA18577,NA18582,NA18593,NA18603,NA18608,NA18609,NA18871,NA18949,NA18959,NA18961,NA18964,NA18965,NA19005,NA19093,NA19116,NA19138,NA19238 esv3387389 1 189847394 189847413 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597580,essv9597591,essv9597602 M 185 3 0 "" NA07346,NA12287,NA12873 esv3437339 1 189847402 189847408 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902451,essv8902480,essv8902482,essv8902478,essv8902464,essv8902475,essv8902479,essv8902489,essv8902465,essv8902487,essv8902483,essv8902453,essv8902457,essv8902473,essv8902454,essv8902485,essv8902484,essv8902450,essv8902471,essv8902456,essv8902490,essv8902474,essv8902494,essv8902444,essv8902460,essv8902455,essv8902467,essv8902477,essv8902452,essv8902472,essv8902495,essv8902446,essv8902488,essv8902461,essv8902445,essv8902462,essv8902476,essv8902458,essv8902443,essv8902486,essv8902493,essv8902463,essv8902449,essv8902466,essv8902491,essv8902468,essv8902469 M 185 47 0 "" NA10847,NA10851,NA11829,NA11831,NA11918,NA11920,NA11931,NA11992,NA11993,NA11994,NA11995,NA12003,NA12006,NA12154,NA12155,NA12156,NA12249,NA12414,NA12716,NA12751,NA12761,NA12763,NA18499,NA18517,NA18523,NA18550,NA18558,NA18564,NA18566,NA18570,NA18576,NA18577,NA18582,NA18593,NA18603,NA18608,NA18609,NA18871,NA18949,NA18959,NA18961,NA18964,NA18965,NA19005,NA19093,NA19116,NA19138 esv1269596 1 189847404 189847404 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3824187 M 2 1 0 "" HuRef nsv825775 1 189878297 189881039 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1421491 M 31 0 1 "" NA18997 nsv548590 1 189884705 189934536 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732605 M 17421 0 1 "" nsv548591 1 189890316 189909239 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732606 M 17421 0 1 "" dgv703n54 1 189890316 190203179 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548593,nsv548592 M 17421 2 0 "" nsv466972 1 189899969 189934536 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542408 M 1557 0 1 "" HGDP00241 nsv548594 1 189899969 189934536 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173976 M 17421 0 1 "" HGDP00241 nsv999147 1 189900616 190211476 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704867 M 29084 1 0 "" nsv548595 1 189903597 189960083 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732609 M 17421 0 1 "" esv3890948 1 189912904 190024731 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25786721,essv25796798,essv25797887 M 3017 0 3 "" esv27256 1 189923760 189927690 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19563 M 40 0 1 "" NA07045 dgv704n54 1 189923973 189926701 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548597,nsv548596 M 17421 0 2 "" dgv705n54 1 189923973 189927630 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548601,nsv548600,nsv548599,nsv548598,nsv548605,nsv548603 M 17421 0 15 "" nsv548602 1 189923973 189934536 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732623 M 17421 0 1 "" nsv548604 1 189924773 189926897 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732626 M 17421 0 1 "" nsv548606 1 189926377 189927630 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732629,nssv732631,nssv732630 M 17421 0 3 "" nsv477532 1 189931936 189931936 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014171 M 9 1 0 "" NA18517 nsv1002364 1 189954794 190006816 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704869,nssv3704868 M 29084 0 2 "" nsv428279 1 189955869 190281235 CNV loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv452587 M 62 0 1 "" NA18916 nsv548607 1 189966202 189997861 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732632 M 17421 0 1 "" nsv998744 1 189973261 189994618 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483392,nssv3496478 M 29084 1 1 "" dgv497n100 1 189973261 190001664 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006796,nsv1002930 M 29084 0 2 "" nsv511724 1 189973915 189976504 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626368 M 1 0 1 "" 1 esv2421589 1 189983338 189992781 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5127876,essv5028778,essv5020195,essv5096530,essv5054656,essv5024226,essv5138188,essv5105400,essv5153002,essv5118567,essv5083050,essv5127293,essv5157423,essv5147488,essv5124211,essv5105467 M 1184 0 16 "" NA18519,NA18855,NA18910,NA18911,NA19028,NA19044,NA19206,NA19208,NA19328,NA19380,NA19472,NA19712,NA19908,NA19919,NA20350,NA21339 esv2762206 1 189983338 189992781 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006750 M 1109 0 1 "" RW_0251 nsv441728 1 189983338 189992781 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656837,nssv1656836,nssv1656838 M 270 0 3 "" NA18855,NA19206,NA19208 nsv514917 1 189983360 189992432 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2854321,nssv2854312,nssv2854329,nssv2854310,nssv2854322,nssv2854311,nssv2853963,nssv2854313,nssv2853978,nssv2852860,nssv2853970,nssv2852792,nssv2853967,nssv2854314,nssv2853976,nssv2852884,nssv2854316,nssv2854090,nssv2853974,nssv2854214,nssv2853980,nssv2854204,nssv2853979,nssv2852846,nssv2854330,nssv2852833,nssv2854328,nssv2854134,nssv2854325,nssv2852863,nssv2853973,nssv2854136,nssv2853977,nssv2854104,nssv2853989,nssv2854272,nssv2853990,nssv2852805,nssv2853984,nssv2852871,nssv2854317,nssv2854203,nssv2853991,nssv2854247,nssv2853968,nssv2854048,nssv2853971,nssv2852836,nssv2853982,nssv2854258,nssv2853985,nssv2854155,nssv2853966,nssv2852838,nssv2853986,nssv2854086,nssv2854323,nssv2854172,nssv2853975,nssv2854270,nssv2853962,nssv2854260,nssv2853969,nssv2854067,nssv2853964,nssv2852922,nssv2854318,nssv2854156,nssv2853981,nssv2854238,nssv2854324,nssv2854124,nssv2853965,nssv2854094,nssv2853983,nssv2854240,nssv2853987,nssv2854269,nssv2854326,nssv2852844,nssv2854320,nssv2852921,nssv2854327,nssv2854196,nssv2853972,nssv2854295,nssv2853988,nssv2852861,nssv2853992,nssv2852873,nssv2854319,nssv2854053,nssv2854030,nssv2854083,nssv2852868,nssv2852782,nssv2854293,nssv2854285,nssv2854036,nssv2854274,nssv2854157,nssv2854168,nssv2854280,nssv2854177,nssv2854180,nssv2854254,nssv2854163,nssv2854148,nssv2854159,nssv2854264,nssv2854095,nssv2852856,nssv2852828,nssv2854294,nssv2852903,nssv2852902,nssv2854042,nssv2854209,nssv2852886,nssv2852771,nssv2854092,nssv2854198,nssv2854236,nssv2852879,nssv2852770,nssv2852791,nssv2854185,nssv2854232,nssv2854227,nssv2854217,nssv2854235,nssv2854263,nssv2854193,nssv2854146,nssv2854167,nssv2852864,nssv2854128,nssv2854286,nssv2852831,nssv2854298,nssv2854121,nssv2854108,nssv2854279,nssv2854175,nssv2852881,nssv2852890,nssv2854057,nssv2852789,nssv2854207,nssv2854164,nssv2854224,nssv2854060,nssv2854110,nssv2854266,nssv2854183,nssv2852900,nssv2854202,nssv2854174,nssv2852802,nssv2852851,nssv2852783,nssv2854078,nssv2854161,nssv2852803,nssv2854169,nssv2854046,nssv2854039,nssv2854289,nssv2852848,nssv2852822,nssv2852815,nssv2852777,nssv2852824,nssv2854043,nssv2854041,nssv2852819,nssv2852920,nssv2852787,nssv2852874,nssv2852818,nssv2854123,nssv2854283,nssv2852829,nssv2854201,nssv2852794,nssv2852843,nssv2854111,nssv2854144,nssv2854062,nssv2854147,nssv2854192,nssv2854118,nssv2854225,nssv2852865,nssv2854165,nssv2854278,nssv2852795,nssv2852854,nssv2852912,nssv2854208,nssv2854132,nssv2852810,nssv2852797,nssv2854055,nssv2852788,nssv2854306,nssv2852826,nssv2854267,nssv2852778,nssv2854143,nssv2852908,nssv2854069,nssv2852857,nssv2854091,nssv2852852,nssv2854139,nssv2854195,nssv2854131,nssv2852790,nssv2854291,nssv2854107,nssv2854205,nssv2854049,nssv2854282,nssv2854152,nssv2854184,nssv2852915,nssv2852780,nssv2854113,nssv2854221,nssv2852841,nssv2854186,nssv2854292,nssv2854243,nssv2854303,nssv2854234,nssv2854301,nssv2854216,nssv2854098,nssv2854257,nssv2852820,nssv2854160,nssv2854097,nssv2852887,nssv2854194,nssv2854239,nssv2854105,nssv2852800,nssv2854102,nssv2852821,nssv2852866,nssv2852785,nssv2854158,nssv2852823,nssv2852918,nssv2854063,nssv2852906,nssv2854077,nssv2854047,nssv2852872,nssv2852812,nssv2852891,nssv2852899,nssv2854074,nssv2854229,nssv2854273,nssv2854035,nssv2852845,nssv2854284,nssv2852892,nssv2852768,nssv2852779,nssv2854173,nssv2852870,nssv2854181,nssv2854045,nssv2852814,nssv2854276,nssv2854189,nssv2852804,nssv2854050,nssv2852827,nssv2852813,nssv2854233,nssv2854142,nssv2852897,nssv2852796,nssv2854089,nssv2854191,nssv2854150,nssv2854141,nssv2854299,nssv2854106,nssv2854096,nssv2854296,nssv2852799,nssv2854307,nssv2852898,nssv2852869,nssv2854251,nssv2854250,nssv2852853,nssv2854248,nssv2854190,nssv2854302,nssv2854099,nssv2854210,nssv2854038,nssv2854130,nssv2852837,nssv2852858,nssv2854133,nssv2854044,nssv2854119,nssv2854171,nssv2854277,nssv2854088,nssv2854261,nssv2852910,nssv2852834,nssv2854215,nssv2854054,nssv2852882,nssv2854154,nssv2852916,nssv2854129,nssv2854170,nssv2854271,nssv2854052,nssv2854066,nssv2854153,nssv2854032,nssv2852877,nssv2854309,nssv2854112,nssv2852911,nssv2852901,nssv2852904,nssv2852893,nssv2854287,nssv2854255,nssv2854213,nssv2852793,nssv2852894,nssv2854200,nssv2854246,nssv2852919,nssv2854297,nssv2854040,nssv2854197,nssv2854188,nssv2854127,nssv2854140,nssv2854300,nssv2854125,nssv2854059,nssv2852817,nssv2854281,nssv2854068,nssv2852867,nssv2854079,nssv2852775,nssv2852883,nssv2854093,nssv2852849,nssv2852781,nssv2852798,nssv2852862,nssv2854226,nssv2852832,nssv2854135,nssv2852895,nssv2854031,nssv2854061,nssv2854223,nssv2854237,nssv2852842,nssv2854100,nssv2852830,nssv2854262,nssv2852885,nssv2854206,nssv2854220,nssv2854101,nssv2852774,nssv2854116,nssv2854245,nssv2854072,nssv2854275,nssv2854126,nssv2852806,nssv2854230,nssv2854187,nssv2852772,nssv2852801,nssv2854115,nssv2852917,nssv2854109,nssv2852840,nssv2852776,nssv2854056,nssv2854117,nssv2852786,nssv2854034,nssv2852811,nssv2852769,nssv2852896,nssv2852875,nssv2854114,nssv2852909,nssv2854051,nssv2854070,nssv2852809,nssv2852859,nssv2852905,nssv2852876,nssv2854137,nssv2854087,nssv2854242,nssv2854244,nssv2854199,nssv2854065,nssv2852913,nssv2854219,nssv2854315,nssv2854145,nssv2852850,nssv2854138,nssv2854290,nssv2854218,nssv2854084,nssv2854076,nssv2854033,nssv2854304,nssv2852880,nssv2854179,nssv2854081,nssv2854212,nssv2854064,nssv2854103,nssv2854071,nssv2854176,nssv2854268,nssv2854037,nssv2854178,nssv2852816,nssv2852889,nssv2854228,nssv2852888,nssv2854211,nssv2852825,nssv2854305,nssv2854259,nssv2852773,nssv2854122,nssv2854058,nssv2854075,nssv2854231,nssv2854120,nssv2852914,nssv2854166,nssv2854256,nssv2852847,nssv2854151,nssv2852784,nssv2854222,nssv2854241,nssv2854073,nssv2852835,nssv2852807,nssv2854253,nssv2854265,nssv2854288,nssv2854085,nssv2854182,nssv2854162,nssv2852808,nssv2854252,nssv2852839,nssv2854149,nssv2852878,nssv2854308,nssv2852907,nssv2854249,nssv2852855,nssv2854082,nssv2854080 M 2366 0 487 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv517577 1 189986050 189988086 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689210,nssv693927,nssv667910,nssv652420,nssv663568,nssv675013,nssv674400 M 2026 0 7 "" nsv1002817 1 189990371 190023313 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484864 M 29084 0 1 "" esv26465 1 189992637 189993625 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11031 M 40 1 0 "" NA12749 nsv548608 1 190016131 190090491 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732633 M 17421 0 1 "" nsv470764 1 190039595 190142375 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544382,nssv544383,nssv544380,nssv544381 M 443 0 4 "" HGDP00928,HGDP00944,HGDP01216,HGDP01283 esv2758985 1 190044143 190092375 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756876 M 270 0 1 "" NA18992 nsv1015066 1 190044371 190174105 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498372 M 29084 0 1 "" esv7413 1 190053220 190053887 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29854 M 1 0 0 "" nsv548609 1 190055147 190070888 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732634 M 17421 0 1 "" nsv818700 1 190065587 190107549 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417651 M 112 0 1 "" NA18992 nsv548610 1 190072149 190220298 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732635 M 17421 0 1 "" esv2627445 1 190083622 190084618 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5285083 M 1 1 0 "" NA18507 esv3308698 1 190084034 190084035 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840504,essv7841329,essv7839797 M 185 3 0 "" NA12878,NA12891,NA12892 esv3307096 1 190084039 190084040 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7831924,essv7800879,essv7779050,essv7808038,essv7836042,essv7822100,essv7773211,essv7791164,essv7830480,essv7784595,essv7779370,essv7790033,essv7822728,essv7806470,essv7810437,essv7793284,essv7830160,essv7813744,essv7829896,essv7778808,essv7774079,essv7771023,essv7777665,essv7792783,essv7808770,essv7794340,essv7801765,essv7772885,essv7821840,essv7815554,essv7798957,essv7835771,essv7785217,essv7782966,essv7824570,essv7798302,essv7789168,essv7775660,essv7811564,essv7816710,essv7779924,essv7823767,essv7780513,essv7814947 M 185 44 0 "" NA07051,NA07347,NA11829,NA11918,NA11920,NA11994,NA11995,NA12003,NA12004,NA12287,NA12489,NA12716,NA12750,NA12761,NA12776,NA12878,NA12891,NA12892,NA18522,NA18526,NA18545,NA18547,NA18552,NA18555,NA18562,NA18563,NA18570,NA18571,NA18572,NA18573,NA18576,NA18579,NA18582,NA18605,NA18907,NA18940,NA18942,NA18945,NA18948,NA18952,NA18960,NA18964,NA19138,NA19143 esv3341612 1 190084042 190084060 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673859,essv8673858,essv8673857 M 185 3 0 "" NA12878,NA12891,NA12892 esv3436661 1 190084053 190084062 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902532,essv8902500,essv8902512,essv8902523,essv8902524,essv8902527,essv8902497,essv8902516,essv8902528,essv8902531,essv8902520,essv8902505,essv8902507,essv8902537,essv8902526,essv8902502,essv8902510,essv8902535,essv8902522,essv8902501,essv8902508,essv8902504,essv8902511,essv8902515,essv8902529,essv8902521,essv8902499,essv8902533,essv8902519,essv8902496,essv8902530,essv8902506,essv8902518,essv8902498,essv8902509,essv8902534,essv8902513,essv8902517 M 185 38 0 "" NA07051,NA11829,NA11918,NA11920,NA11994,NA11995,NA12003,NA12004,NA12489,NA12716,NA12750,NA12761,NA12776,NA18522,NA18526,NA18545,NA18547,NA18552,NA18555,NA18562,NA18563,NA18570,NA18571,NA18572,NA18573,NA18576,NA18579,NA18582,NA18605,NA18907,NA18940,NA18942,NA18945,NA18948,NA18952,NA18960,NA18964,NA19138 nsv516096 1 190086504 190142375 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv665791,nssv677013,nssv671282,nssv669667,nssv662005,nssv684929,nssv664020,nssv671681,nssv665890,nssv680386,nssv671538,nssv674466,nssv686095,nssv673577,nssv665353,nssv676403,nssv692926,nssv666810,nssv669953,nssv652591,nssv680850,nssv662068,nssv681417,nssv668039,nssv679918,nssv662182,nssv685719,nssv693158,nssv673888,nssv671458,nssv663258,nssv688146,nssv652447,nssv653202,nssv664133,nssv659732,nssv668149,nssv681775,nssv674888,nssv687279,nssv685474,nssv652497,nssv686520,nssv688251,nssv665605,nssv669182,nssv677501,nssv666333,nssv680928,nssv676918,nssv664908,nssv675918,nssv688215,nssv658201,nssv686543,nssv680900 M 2026 0 56 "" dgv706n54 1 190090583 190135064 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548612,nsv548611,nsv548613,nsv548614 M 17421 0 6 "" HGDP00928 nsv1009021 1 190092465 190166454 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502457 M 29084 0 1 "" esv26733 1 190093186 190135085 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14099 M 40 0 3 "" NA18861,NA18916,NA19114 nsv442538 1 190095692 190133873 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619205,nssv1619206,nssv1619207,nssv1619204,nssv1619208,nssv1619201,nssv1619203,nssv1619202,nssv1619200 M 270 0 9 "" NA18852,NA18861,NA18863,NA19098,NA19100,NA19119,NA19140,NA19142,NA19222 esv2764201 1 190095692 190146713 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006761,essv7006760,essv7006759,essv7006757,essv7006752,essv7006771,essv7006768,essv7006754,essv7006769,essv7006765,essv7006764,essv7006766,essv7006770,essv7006755,essv7006762,essv7006751,essv7006758,essv7006763,essv7006753 M 1109 0 19 "" RW_0031,RW_0047,RW_0078,RW_0084,RW_0100,RW_0105,RW_0113,RW_0120,RW_0179,RW_0216,RW_0262,RW_0263,RW_0328,RW_0358,RW_0573,RW_0594,RW_0601,RW_0637,RW_0663 nsv514028 1 190102352 190132432 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2853997,nssv2854010,nssv2853994,nssv2854001,nssv2853996,nssv2853999,nssv2853995,nssv2853998,nssv2853993,nssv2854003,nssv2854005,nssv2854004,nssv2854007,nssv2854000,nssv2854008,nssv2854011,nssv2854002,nssv2854012,nssv2854009,nssv2854006 M 2366 0 20 "" NA18485,NA18489,NA18852,NA18861,NA18863,NA18916,NA18917,NA18930,NA19098,NA19100,NA19114,NA19115,NA19119,NA19140,NA19142,NA19198,NA19199,NA19222,NA21388,NA21389 dgv4n64 1 190102939 190134703 CNV loss Wang_et_al_2007 17921354 SNP array nsv818711,nsv818722 M 112 0 4 "" NA18852,NA19119,NA19140,NA19142 nsv466983 1 190102939 190134936 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542419 M 1557 0 1 "" HGDP00928 esv3890959 1 190134703 190307199 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779904 M 3017 0 1 "" nsv526835 1 190177842 190182745 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703192 M 2026 1 0 "" dgv707n54 1 190177842 190185114 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548617,nsv548616,nsv548615 M 17421 0 3 "" esv2529301 1 190182320 190185682 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5249079 M 1 0 1 "" NA18507 dgv708n54 1 190182745 190185114 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548619,nsv548618 M 17421 0 3 "" esv2256052 1 190183010 190185370 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4690106 M 1 0 1 "" NA18507 esv3128 1 190183023 190185251 CNV loss Wang_et_al_2008 18987735 Sequencing essv25569 M 1 0 1 "" YH esv28736 1 190183033 190185190 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10320,esv13460,esv13278 M 40 19 5 "" NA06985,NA07045,NA11931,NA11993,NA11995,NA12004,NA12156,NA12239,NA12287,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18511,NA18858,NA18861,NA18909,NA18916,NA19099,NA19147,NA19190,NA19240 nsv820473 1 190183033 190185190 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420802 M 1 0 1 "" NA10851 nsv825786 1 190183033 190185190 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1438616,nssv1439494,nssv1422403,nssv1425542,nssv1434211,nssv1432452,nssv1437951,nssv1434852,nssv1440164,nssv1424423,nssv1436375,nssv1424784 M 31 0 12 "" AK2,AK4,NA18537,NA18542,NA18547,NA18552,NA18564,NA18570,NA18592,NA18947,NA18972,NA18973 nsv825797 1 190183421 190184153 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428856 M 31 0 1 "" AK12 dgv91n67 1 190183421 190188978 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825820,nsv825831,nsv825809 M 31 3 0 "" NA18949,NA18969,NA18997 dgv709n54 1 190183623 190184754 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548620,nsv548628,nsv548631,nsv548632 M 17421 0 11 "" dgv710n54 1 190183623 190184946 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548621,nsv548622,nsv548625,nsv548623,nsv548624,nsv548629,nsv548634,nsv548633,nsv548636 M 17421 0 32 "" dgv711n54 1 190183623 190185114 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548626,nsv548630,nsv548637,nsv548635 M 17421 0 96 "" nsv548627 1 190183623 190190867 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732754,nssv732753,nssv732752 M 17421 0 3 "" dgv712n54 1 190184216 190184946 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548641,nsv548639,nsv548638 M 17421 0 5 "" dgv713n54 1 190184216 190185114 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548640,nsv548642,nsv548643 M 17421 0 9 "" nsv470765 1 190190867 190284246 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544384 M 443 0 1 "" HGDP00890 nsv946549 1 190196175 190197726 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809030,nssv1808989,nssv1809031,nssv1808977,nssv1809028,nssv1809005,nssv1808958,nssv1808991,nssv1808971,nssv1808994,nssv1809036,nssv1809040,nssv1808981,nssv1808983,nssv1808968,nssv1808996,nssv1809035,nssv1809045,nssv1808967,nssv1809012,nssv1808952,nssv1809004,nssv1808955,nssv1809019,nssv1808979,nssv1808984,nssv1808965,nssv1809009,nssv1809033,nssv1808987,nssv1808960,nssv1808992,nssv1808972,nssv1809020,nssv1809027,nssv1809043,nssv1808978,nssv1809026,nssv1808963,nssv1808998,nssv1808962,nssv1809044,nssv1808954,nssv1808997,nssv1809034,nssv1808993,nssv1808953,nssv1809010,nssv1808961,nssv1809037,nssv1808959,nssv1809046,nssv1808970,nssv1808988,nssv1809029,nssv1809038,nssv1809032,nssv1809041,nssv1808975,nssv1809014,nssv1808966,nssv1809023,nssv1808951,nssv1809013,nssv1808956,nssv1808990,nssv1808964,nssv1809002,nssv1808974,nssv1808999,nssv1808969,nssv1809039,nssv1808957,nssv1809017,nssv1809018,nssv1809022,nssv1808973,nssv1809011,nssv1809007,nssv1808982,nssv1809006,nssv1809042,nssv1809000,nssv1809021,nssv1809024,nssv1808995,nssv1809015,nssv1808950,nssv1809008,nssv1809016,nssv1809001,nssv1809003,nssv1808980,nssv1808985,nssv1808986,nssv1808976,nssv1809025 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832137 1 190197667 190335756 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441597 M 95 1 0 "" nsv518617 1 190220298 190250481 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696065 M 2026 0 1 "" nsv548644 1 190220298 190283516 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732803 M 17421 0 1 "" dgv714n54 1 190220298 190307199 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548647,nsv548646,nsv548645 M 17421 0 3 "" nsv548648 1 190268088 190362900 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732807 M 17421 0 1 "" nsv477817 1 190334409 190334409 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018243 M 9 1 0 "" NA18517 esv1337831 1 190458854 190458854 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3826350 M 2 1 0 "" HuRef esv1707380 1 190458890 190458890 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4024410 M 2 1 0 "" HuRef nsv516881 1 190472655 190481687 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv693366,nssv683874,nssv678838,nssv654658,nssv680901 M 2026 0 5 "" nsv548649 1 190481687 190645602 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732808 M 17421 0 1 RGS21 esv3309858 1 190508873 190508874 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837041 M 185 1 0 "" NA19239 esv3382843 1 190508873 190508895 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673860 M 185 1 0 "" NA19239 dgv715n54 1 190513213 190590798 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548650,nsv548651 M 17421 0 8 RGS21 dgv716n54 1 190515739 190640402 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548654,nsv548653,nsv548652,nsv548655 M 17421 0 9 RGS21 dgv717n54 1 190549852 190640402 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548657,nsv548656 M 17421 0 2 RGS21 esv3362585 1 190560412 190560456 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863793 M 185 1 0 RGS21 NA18522 esv3353544 1 190599298 190599317 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597635 M 185 1 0 RGS21 NA12814 nsv466994 1 190629938 191787958 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542430 M 1557 0 1 B3GALT2,CDC73,GLRX2,MIR1278,RGS1,RGS13,RGS2,TROVE2,UCHL5 HGDP01156 nsv548658 1 190629938 191787958 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173978 M 17421 0 1 B3GALT2,CDC73,GLRX2,MIR1278,RGS1,RGS13,RGS2,TROVE2,UCHL5 HGDP01156 nsv1004342 1 190637510 190657256 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487901 M 29084 1 0 "" nsv517084 1 190685545 190685868 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv653761,nssv696512,nssv681730 M 2026 0 3 "" esv3449466 1 190701306 190701325 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863794 M 185 1 0 "" NA12005 esv2762207 1 190716556 190732564 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006772 M 1109 0 1 "" RW_0320 nsv159529 1 190792424 190792424 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178107 M 24 "" nsv3954 1 190797114 190827415 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11135 M 9 1 0 RGS1 NA15510 nsv467005 1 190816535 190891983 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542441 M 1557 1 0 RGS13 HGDP01348 nsv548659 1 190816535 190891983 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173979 M 17421 1 0 RGS13 HGDP01348 nsv516016 1 190837330 190838734 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv670902,nssv665741 M 2026 0 2 "" esv275434 1 190851418 190865084 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585745,essv2586017 M 1250 1 1 "" nsv548660 1 190875891 191211971 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732828 M 17421 1 0 RGS13,RGS2 esv2283787 1 190876225 190876680 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4967758 M 1 0 1 RGS13 NA18507 esv991606 1 190876423 190876488 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3582085 M 3 0 1 RGS13 HuRef esv1739511 1 190876423 190876489 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4256350 M 2 0 1 RGS13 HuRef esv3424496 1 190892100 190892110 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863795 M 185 1 0 RGS13 NA12005 esv23407 1 190941841 190950169 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18975 M 40 0 1 "" NA19099 nsv947459 1 190942685 190948963 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2763028 M 97 0 1 "" HGDP00927 nsv946550 1 190948963 190958066 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1809131,nssv1809112,nssv1809057,nssv1809082,nssv1809127,nssv1809084,nssv1809055,nssv1809080,nssv1809052,nssv1809113,nssv1809132,nssv1809122,nssv1809062,nssv1809105,nssv1809130,nssv1809102,nssv1809078,nssv1809143,nssv1809133,nssv1809093,nssv1809075,nssv1809142,nssv1809069,nssv1809109,nssv1809059,nssv1809141,nssv1809060,nssv1809117,nssv1809076,nssv1809101,nssv1809061,nssv1809095,nssv1809053,nssv1809116,nssv1809064,nssv1809094,nssv1809072,nssv1809081,nssv1809124,nssv1809091,nssv1809068,nssv1809123,nssv1809128,nssv1809120,nssv1809066,nssv1809106,nssv1809067,nssv1809088,nssv1809050,nssv1809137,nssv1809065,nssv1809138,nssv1809126,nssv1809077,nssv1809125,nssv1809121,nssv1809056,nssv1809134,nssv1809058,nssv1809107,nssv1809049,nssv1809097,nssv1809048,nssv1809087,nssv1809129,nssv1809089,nssv1809063,nssv1809140,nssv1809051,nssv1809083,nssv1809054,nssv1809111,nssv1809071,nssv1809085,nssv1809090,nssv1809110,nssv1809119,nssv1809135,nssv1809104,nssv1809079,nssv1809136,nssv1809086,nssv1809115,nssv1809103,nssv1809096,nssv1809070,nssv1809092,nssv1809047,nssv1809118,nssv1809074,nssv1809108,nssv1809139,nssv1809098,nssv1809114,nssv1809099,nssv1809100,nssv1809073 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv997662 1 190982438 191006850 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704870 M 29084 0 1 "" esv2613604 1 191068631 191068704 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5245479 M 1 0 1 "" NA18507 esv33012 1 191109505 191110023 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98434,essv98727,essv96980,essv96248,essv93299,essv100972,essv101434,essv99601,essv99472,essv98222,essv99256,essv100687,essv94424,essv94068,essv98937 M 51 0 15 "" 21603,21606,21656,21693,21772,21802,21808,21817,21938,22170,22217,22275,22335,22352,22371 esv28558 1 191127054 191128549 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20998 M 40 0 1 "" NA19190 nsv519451 1 191147324 191154968 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv674228,nssv695356,nssv656226,nssv688081,nssv702332 M 2026 0 5 "" nsv472785 1 191157143 191157143 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014354 M 9 1 0 "" NA18555 esv2762039 1 191211444 191216463 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7003389 M 1109 0 1 "" SW_0786 dgv498n100 1 191228321 191350668 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002094,nsv998429 M 29084 0 2 GLRX2,TROVE2,UCHL5 nsv946551 1 191229858 191232273 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810148,nssv1810140,nssv1809147,nssv1810117,nssv1809158,nssv1810122,nssv1809152,nssv1810123,nssv1809149,nssv1810109,nssv1810154,nssv1810106,nssv1810153,nssv1810116,nssv1809161,nssv1810160,nssv1809156,nssv1810158,nssv1810150,nssv1809174,nssv1810152,nssv1810111,nssv1809159,nssv1810108,nssv1810146,nssv1809179,nssv1809154,nssv1810107,nssv1809175,nssv1810129,nssv1809150,nssv1810164,nssv1809155,nssv1810124,nssv1810151,nssv1810143,nssv1809172,nssv1810133,nssv1809166,nssv1810105,nssv1809157,nssv1810119,nssv1810149,nssv1809177,nssv1809164,nssv1810104,nssv1809162,nssv1810130,nssv1809146,nssv1810113,nssv1809163,nssv1810162,nssv1809169,nssv1810134,nssv1809160,nssv1809178,nssv1810145,nssv1810120,nssv1809145,nssv1810121,nssv1809165,nssv1810126,nssv1810147,nssv1809176,nssv1809173,nssv1810135,nssv1809153,nssv1810139,nssv1809168,nssv1810131,nssv1809151,nssv1810141,nssv1809148,nssv1810163,nssv1810118,nssv1810144,nssv1810155,nssv1810138,nssv1810159,nssv1810136,nssv1810128,nssv1810112,nssv1809171,nssv1810137,nssv1810142,nssv1810127,nssv1810156,nssv1810161,nssv1810157,nssv1810115,nssv1809170,nssv1809144,nssv1810110,nssv1810114,nssv1809167,nssv1810132,nssv1810125 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv498699 1 191237059 191260247 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585413 M 9 0 1 UCHL5 nsv3966 1 191243080 191271509 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7935 M 9 0 1 UCHL5 NA12156 esv2550406 1 191324346 191325882 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5211210 M 1 0 1 TROVE2 NA18507 nsv832148 1 191410568 191559520 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441598 M 95 1 0 B3GALT2,CDC73 esv275335 1 191422066 191426334 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585653,essv2586068 M 1250 1 1 B3GALT2,CDC73 nsv1001174 1 191453381 191629995 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484353 M 29084 0 1 CDC73 esv275411 1 191458005 191460723 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585325,essv2586110 M 1250 1 1 CDC73 nsv506970 1 191466854 191472854 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619256,nssv623288,nssv620674 M 4 0 0 CDC73 NA10860,NA15510,NA18994 dgv499n100 1 191474135 191507003 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002564,nsv1007444 M 29084 2 0 CDC73 esv275037 1 191479821 191491706 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585209 M 1250 0 1 CDC73 esv2428735 1 191501620 191503027 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5381954 M 1 0 1 "" NA18507 esv4633 1 191501802 191502336 CNV loss Wang_et_al_2008 18987735 Sequencing essv27074 M 1 0 1 "" YH esv2270512 1 191501872 191502460 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4829107 M 1 0 1 "" NA18507 esv5959 1 191501912 191502423 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28400 M 1 0 0 "" nsv997891 1 191538462 191833064 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485670 M 29084 0 1 "" nsv832159 1 191609057 191791695 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441599 M 95 1 0 "" nsv548661 1 191657921 191736857 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732829 M 17421 0 1 "" esv3426293 1 191688755 191688762 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863796,essv7863797 M 185 2 0 "" NA18522,NA19172 nsv832170 1 191693078 191862805 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441600 M 95 1 0 "" nsv478708 1 191762520 191762520 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017163 M 9 1 0 "" NA18507 esv7457 1 191781794 191782684 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29898 M 1 0 0 "" esv2511346 1 191808559 191811317 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5272018 M 1 0 1 "" NA18507 esv3345799 1 191816238 191816265 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902538 M 185 1 0 "" NA18523 esv3303625 1 191816243 191816244 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7755052 M 185 1 0 "" NA18523 nsv474524 1 191817153 191817153 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019541 M 9 1 0 "" NA18956 esv33988 1 191892800 191900885 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv99184 M 51 0 1 "" 22275 esv34989 1 191897200 191976819 CNV loss Pinto_et_al_2007 17911159 SNP array essv6980936,essv6987880,essv6980937 M 771 0 3 "" NA19152 esv2758986 1 191898151 191976819 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756877 M 270 0 3 "" NA19152,NA19154,NA19209 nsv1012595 1 191915266 191949253 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704872 M 29084 0 1 "" nsv441729 1 191927641 191976999 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656841,nssv1656839,nssv1656840 M 270 0 3 "" NA19152,NA19154,NA19209 dgv10e55 1 191929899 191976819 CNV loss Pinto_et_al_2007 17911159 SNP array esv34863,esv34261 M 771 0 6 "" NA19154,NA19209 esv3435390 1 191941731 191941769 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673861 M 185 1 0 "" NA19238 esv3341898 1 191941739 191941758 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597646 M 185 1 0 "" NA12287 esv3309409 1 191941742 191941743 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837855,essv7838707,essv7837990,essv7838326 M 185 4 0 "" NA12878,NA12891,NA12892,NA19238 esv3341470 1 191941747 191941764 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902544,essv8902545,essv8902541,essv8902542,essv8902543,essv8902539,essv8902540 M 185 7 0 "" NA12287,NA18508,NA18552,NA18909,NA18961,NA19099,NA19147 esv3306370 1 191941749 191941750 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7825987,essv7808896,essv7793401,essv7833047,essv7824953,essv7828054,essv7818050,essv7783595 M 185 8 0 "" NA12287,NA18508,NA18552,NA18909,NA18961,NA19099,NA19147,NA19238 nsv548662 1 191987766 192070832 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732830 M 17421 0 1 "" nsv946552 1 191990810 191997972 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810189,nssv1810838,nssv1810186,nssv1810830,nssv1810184,nssv1810204,nssv1810179,nssv1810841,nssv1810178,nssv1810211,nssv1810173,nssv1810840,nssv1810854,nssv1810198,nssv1810859,nssv1810852,nssv1810168,nssv1810205,nssv1810176,nssv1810839,nssv1810862,nssv1810848,nssv1810170,nssv1810213,nssv1810182,nssv1810871,nssv1810196,nssv1810212,nssv1810857,nssv1810214,nssv1810194,nssv1810835,nssv1810169,nssv1810216,nssv1810193,nssv1810206,nssv1810861,nssv1810872,nssv1810174,nssv1810847,nssv1810858,nssv1810208,nssv1810860,nssv1810842,nssv1810855,nssv1810201,nssv1810171,nssv1810832,nssv1810187,nssv1810217,nssv1810172,nssv1810843,nssv1810190,nssv1810850,nssv1810175,nssv1810831,nssv1810167,nssv1810210,nssv1810185,nssv1810837,nssv1810180,nssv1810195,nssv1810183,nssv1810203,nssv1810177,nssv1810833,nssv1810181,nssv1810868,nssv1810166,nssv1810197,nssv1810856,nssv1810853,nssv1810863,nssv1810864,nssv1810202,nssv1810851,nssv1810199,nssv1810846,nssv1810870,nssv1810865,nssv1810836,nssv1810192,nssv1810200,nssv1810844,nssv1810866,nssv1810849,nssv1810867,nssv1810834,nssv1810873,nssv1810191,nssv1810869,nssv1810845,nssv1810207,nssv1810209,nssv1810165,nssv1810188,nssv1810215 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3361861 1 192013961 192013980 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597657 M 185 1 0 "" NA12874 esv3304102 1 192013970 192013971 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7764321 M 185 1 0 "" NA12874 esv3306629 1 192044890 192044891 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7751433,essv7747931,essv7758109,essv7751596,essv7748417,essv7746606,essv7743970,essv7740358,essv7759091,essv7753406,essv7741578,essv7752081,essv7754858,essv7754299,essv7751277,essv7744418,essv7742920,essv7759558 M 185 18 0 "" NA10851,NA11894,NA12154,NA12287,NA12878,NA12891,NA12892,NA18502,NA18507,NA18508,NA18511,NA18523,NA18858,NA18943,NA18947,NA18951,NA19099,NA19225 esv3310020 1 192044918 192044919 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836724 M 185 1 0 "" NA19239 esv3362781 1 192044919 192044935 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673863,essv8673862,essv8673864 M 185 3 0 "" NA12878,NA12891,NA12892 esv3420553 1 192044921 192044959 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902560,essv8902561,essv8902553,essv8902548,essv8902556,essv8902552,essv8902550,essv8902555,essv8902546,essv8902554,essv8902549,essv8902557,essv8902551,essv8902562,essv8902563 M 185 15 0 "" NA10851,NA11894,NA12154,NA12287,NA18502,NA18507,NA18508,NA18511,NA18523,NA18858,NA18943,NA18947,NA18951,NA19099,NA19225 nsv548663 1 192114220 192168129 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732831 M 17421 1 0 "" nsv548664 1 192205567 192267576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732832 M 17421 0 1 "" esv3183 1 192265651 192266862 CNV loss Wang_et_al_2008 18987735 Sequencing essv25624 M 1 0 1 "" YH nsv819881 1 192265661 192266599 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419128 M 2 0 1 "" AK1 nsv825842 1 192265689 192266182 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1429598,nssv1427295,nssv1431114,nssv1423166 M 31 0 4 "" AK14,AK18,AK8,NA18999 esv275445 1 192288608 192293566 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585755,essv2585452 M 1250 1 1 "" nsv467016 1 192289441 192304513 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542452 M 1557 0 1 "" NINDS_29 nsv548665 1 192289441 192304513 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173980 M 17421 0 1 "" NINDS_29 nsv522962 1 192302571 192303277 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698631 M 2026 0 1 "" esv3342517 1 192334457 192334502 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902564,essv8902566,essv8902568,essv8902567,essv8902565 M 185 5 0 "" NA18555,NA18563,NA18571,NA18608,NA18973 esv3443034 1 192334459 192334478 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597670 M 185 1 0 "" NA18970 nsv832181 1 192355740 192522238 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441601 M 95 0 1 "" nsv1004338 1 192409938 192647758 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487893 M 29084 0 1 "" nsv946553 1 192423326 192426050 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810893,nssv1810968,nssv1810959,nssv1810923,nssv1810882,nssv1810937,nssv1810951,nssv1810929,nssv1810888,nssv1810949,nssv1810958,nssv1810935,nssv1810879,nssv1810944,nssv1810955,nssv1810926,nssv1810891,nssv1810906,nssv1810905,nssv1810945,nssv1810954,nssv1810927,nssv1810895,nssv1810936,nssv1810886,nssv1810897,nssv1810883,nssv1810925,nssv1810902,nssv1810932,nssv1810898,nssv1810901,nssv1810884,nssv1810919,nssv1810876,nssv1810912,nssv1810957,nssv1810939,nssv1810952,nssv1810913,nssv1810899,nssv1810911,nssv1810880,nssv1810928,nssv1810889,nssv1810934,nssv1810956,nssv1810940,nssv1810887,nssv1810900,nssv1810894,nssv1810933,nssv1810892,nssv1810969,nssv1810890,nssv1810914,nssv1810903,nssv1810910,nssv1810896,nssv1810924,nssv1810875,nssv1810961,nssv1810878,nssv1810916,nssv1810953,nssv1810930,nssv1810881,nssv1810918,nssv1810885,nssv1810950,nssv1810960,nssv1810938,nssv1810877,nssv1810917,nssv1810947,nssv1810907,nssv1810874,nssv1810948,nssv1810942,nssv1810922,nssv1810963,nssv1810965,nssv1810904,nssv1810941,nssv1810967,nssv1810908,nssv1810931,nssv1810962,nssv1810970,nssv1810921,nssv1810915,nssv1810946,nssv1810966,nssv1810920,nssv1810909,nssv1810964,nssv1810943 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv825853 1 192496305 192498409 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423994 M 31 0 1 "" NA18582 nsv508057 1 192503089 192509089 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622303,nssv624229,nssv618518 M 4 0 0 "" CHM,NA10860,NA18994 nsv467027 1 192518444 192574825 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542463 M 1557 0 1 "" 1780854477_A nsv548666 1 192518444 192574825 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173981 M 17421 0 1 "" 1780854477_A nsv522808 1 192534024 192554519 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698454 M 2026 0 1 "" nsv525365 1 192534024 192763213 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701485 M 2026 1 0 "" esv1098342 1 192539424 192539424 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4311940 M 2 1 0 "" HuRef esv1293163 1 192539483 192539483 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4196178 M 2 1 0 "" HuRef esv1348959 1 192539577 192539577 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4103658 M 2 1 0 "" HuRef dgv718n54 1 192552316 192597323 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548667,nsv548669 M 17421 0 3 "" nsv548668 1 192552316 192763213 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732834 M 17421 1 0 "" nsv548670 1 192568376 192597323 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732837 M 17421 0 1 "" nsv1009701 1 192571241 192602312 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487523 M 29084 1 0 "" nsv946554 1 192595092 192596807 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810983,nssv1811674,nssv1810990,nssv1811010,nssv1811669,nssv1811660,nssv1811672,nssv1811014,nssv1810986,nssv1811659,nssv1810975,nssv1811652,nssv1810985,nssv1811653,nssv1810979,nssv1811681,nssv1810974,nssv1811658,nssv1810988,nssv1811019,nssv1810976,nssv1811020,nssv1810982,nssv1811683,nssv1810977,nssv1810997,nssv1811002,nssv1811024,nssv1811666,nssv1811650,nssv1810992,nssv1811649,nssv1810995,nssv1811662,nssv1811667,nssv1811001,nssv1810981,nssv1810998,nssv1811000,nssv1811023,nssv1810999,nssv1811022,nssv1811671,nssv1811644,nssv1810987,nssv1811003,nssv1811670,nssv1811016,nssv1810973,nssv1811646,nssv1811673,nssv1811677,nssv1810996,nssv1811657,nssv1811665,nssv1811645,nssv1811664,nssv1811655,nssv1810978,nssv1811017,nssv1810984,nssv1811013,nssv1810991,nssv1811027,nssv1810989,nssv1811651,nssv1810972,nssv1811008,nssv1810993,nssv1810994,nssv1811668,nssv1810971,nssv1810980,nssv1811025,nssv1811678,nssv1811011,nssv1811015,nssv1811654,nssv1811007,nssv1811656,nssv1811012,nssv1811679,nssv1811026,nssv1811647,nssv1811680,nssv1811021,nssv1811661,nssv1811663,nssv1811682,nssv1811004,nssv1811648,nssv1811675,nssv1811676,nssv1811009,nssv1811005,nssv1811018,nssv1811006 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2037082 1 192607540 192607944 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4696923 M 1 0 1 "" NA18507 esv991854 1 192616176 192618212 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586885 M 3 1 0 "" HuRef nsv825864 1 192616176 192618286 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1433458 M 31 0 1 "" NA18526 esv2483589 1 192617028 192618844 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5391971 M 1 0 1 "" NA18507 esv26515 1 192617034 192618267 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13611 M 40 0 5 "" NA18523,NA18861,NA19114,NA19129,NA19240 dgv719n54 1 192617199 192617757 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548672,nsv548671 M 17421 0 43 "" nsv521911 1 192622198 192702964 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694682 M 2026 0 1 "" nsv467049 1 192670196 192712089 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542484 M 1557 0 1 "" HGDP00005 nsv548673 1 192670196 192712089 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173982 M 17421 0 1 "" HGDP00005 esv3419036 1 192676973 192676990 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863799 M 185 1 0 "" NA12005 nsv1011220 1 192700878 193542940 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490976 M 29084 1 0 "" nsv548674 1 192702964 192719675 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732881 M 17421 1 0 "" nsv548675 1 192712089 192719675 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv732882 M 17421 1 0 "" esv21589 1 192716897 192721360 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15761,esv17563 M 40 9 12 "" NA06985,NA07037,NA11931,NA11995,NA12156,NA12239,NA12287,NA12489,NA12749,NA12776,NA12878,NA18508,NA18517,NA18523,NA18861,NA18916,NA19099,NA19114,NA19147,NA19240,NA19257 nsv820647 1 192716897 192721360 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420813 M 1 0 1 "" NA10851 nsv825875 1 192716897 192721360 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422404,nssv1427297,nssv1440850,nssv1426429,nssv1423167,nssv1433459,nssv1435687,nssv1432463,nssv1423995,nssv1424435,nssv1440165,nssv1437979,nssv1434899 M 31 0 13 "" AK6,AK8,NA18526,NA18552,NA18564,NA18566,NA18582,NA18942,NA18947,NA18951,NA18969,NA18972,NA18999 nsv511725 1 192716995 192721121 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626369 M 1 0 1 "" 1 esv3374654 1 192717052 192717350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692089 M 185 1 0 "" NA12892 esv1224680 1 192717106 192717106 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3845343 M 2 1 0 "" HuRef nsv819066 1 192717156 192721514 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419631 M 2 0 1 "" AK1 nsv508683 1 192717197 192742459 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618996,nssv622782 M 4 0 2 "" NA10860,NA18994 esv994739 1 192717609 192727751 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564582 M 3 0 1 "" HuRef esv1000815 1 192717643 192719944 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587073 M 3 0 1 "" HuRef nsv825886 1 192717643 192719944 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1429599,nssv1428061,nssv1437258,nssv1439495,nssv1425543,nssv1421493,nssv1428857,nssv1434212,nssv1438617,nssv1430383,nssv1434963,nssv1431115,nssv1424785,nssv1437963,nssv1431857,nssv1436376,nssv1423819 M 31 0 17 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,NA18537,NA18542,NA18547,NA18570,NA18592,NA18949,NA18968,NA18973,NA18997 esv995329 1 192718148 192719537 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586366 M 3 0 1 "" HuRef dgv720n54 1 192718169 192719675 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548677,nsv548676,nsv548686,nsv548687 M 17421 9 0 "" dgv721n54 1 192718169 192719876 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548678,nsv548679,nsv548685 M 17421 145 845 "" dgv722n54 1 192718169 192720088 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548680,nsv548681 M 17421 3 0 "" dgv723n54 1 192718169 192720735 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548683,nsv548682 M 17421 5 0 "" nsv548684 1 192718221 192719581 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733883 M 17421 0 1 "" nsv548688 1 192719876 192720519 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733891 M 17421 0 1 "" nsv548689 1 192719876 192720735 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733892 M 17421 1 0 "" esv3386855 1 192730700 192730700 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740945 M 185 1 0 "" NA19240 nsv548690 1 192763213 192873605 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733893 M 17421 0 1 "" nsv511009 1 192769100 192783732 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622428 M 4 0 0 "" NA10860 nsv474640 1 192769239 192769239 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019464 M 9 1 0 "" NA18956 nsv825897 1 192775599 192776285 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1425544 M 31 1 0 "" AK4 esv6762 1 192784125 192784607 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29203 M 1 0 0 "" esv3697 1 192784153 192784552 CNV loss Wang_et_al_2008 18987735 Sequencing essv26138 M 1 0 1 "" YH esv994716 1 192784231 192784490 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571949 M 3 0 1 "" HuRef esv1186873 1 192784231 192784491 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3791875 M 2 0 1 "" HuRef nsv467072 1 192792510 192904379 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542502 M 1557 0 1 "" NINDS_95 dgv724n54 1 192792510 192907798 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548692,nsv548691 M 17421 0 2 "" NINDS_95 nsv467094 1 192809906 192851600 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542512 M 1557 0 1 "" 1780854061_A nsv548693 1 192809906 192851600 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173984 M 17421 0 1 "" 1780854061_A nsv467105 1 192809906 192873605 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542523 M 1557 0 1 "" 1780862001_A dgv725n54 1 192827086 192913367 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548696,nsv548694 M 17421 0 2 "" nsv548695 1 192838467 192888462 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733896 M 17421 0 1 "" esv3415991 1 192840332 192840332 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823436 M 185 1 0 "" NA12878 nsv832192 1 192862083 193042287 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441602 M 95 0 1 "" esv2423930 1 192904125 192906059 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5394106 M 1 0 0 "" NA18507 esv8306 1 192905254 192905573 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30747 M 1 0 0 "" esv1757669 1 192905328 192905328 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3633315 M 2 1 0 "" HuRef esv2762208 1 192926782 192951366 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006773 M 1109 1 0 "" RW_0558 esv3356825 1 192941747 192941759 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673866,essv8673867 M 185 2 0 "" NA12878,NA12891 esv3371656 1 192941754 192941766 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902590,essv8902575,essv8902586,essv8902573,essv8902583,essv8902602,essv8902605,essv8902595,essv8902593,essv8902600,essv8902571,essv8902589,essv8902596,essv8902572,essv8902569,essv8902577,essv8902597,essv8902587,essv8902576,essv8902594,essv8902574,essv8902604,essv8902591,essv8902599,essv8902580,essv8902579,essv8902582,essv8902584,essv8902601,essv8902585,essv8902578,essv8902598,essv8902588 M 185 33 0 "" NA07051,NA07347,NA07357,NA11894,NA11920,NA11992,NA12144,NA12287,NA12414,NA12717,NA12749,NA12750,NA12751,NA12763,NA12776,NA18519,NA18542,NA18547,NA18562,NA18563,NA18564,NA18570,NA18571,NA18572,NA18573,NA18576,NA18605,NA18943,NA18959,NA18964,NA18973,NA19102,NA19138 esv32801 1 193032557 193033134 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98895 M 51 0 1 "" 21606 nsv519014 1 193034608 193099113 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696482 M 2026 0 1 "" nsv467116 1 193037956 193099113 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542524 M 1557 0 1 "" 1780862176_A dgv726n54 1 193037956 193116312 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548700,nsv548697 M 17421 0 3 "" 1780862176_A nsv548698 1 193039080 193227795 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733899 M 17421 0 1 "" nsv548699 1 193044429 193468824 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733900 M 17421 1 0 "" nsv832204 1 193065192 193205943 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441603 M 95 1 0 "" esv2505447 1 193068771 193075402 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5251873 M 1 0 1 "" NA18507 esv2407337 1 193069009 193074751 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4558107 M 1 0 1 "" NA18507 nsv467138 1 193134533 193176987 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542525 M 1557 0 1 "" HGDP00910 nsv548701 1 193134533 193176987 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173986 M 17421 0 1 "" HGDP00910 esv2305556 1 193147467 193147872 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4959593 M 1 0 1 "" NA18507 esv1002178 1 193147646 193147695 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572108 M 3 0 1 "" HuRef nsv832215 1 193169591 193372757 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441604 M 95 0 1 "" esv3329882 1 193175570 193175605 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902606,essv8902609,essv8902608,essv8902607 M 185 4 0 "" NA18858,NA18870,NA18907,NA19225 nsv548702 1 193185872 193285727 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733902 M 17421 0 1 "" esv3343601 1 193201232 193201746 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652058 M 185 1 0 "" NA19240 esv3308889 1 193201265 193201266 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838660 M 185 1 0 "" NA19238 esv3397500 1 193201266 193201274 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673869,essv8673870,essv8673868 M 185 3 0 "" NA19238,NA19239,NA19240 esv23079 1 193202778 193212714 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16266 M 40 0 1 "" NA18861 nsv514029 1 193204688 193212864 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2854015,nssv2854018,nssv2854014,nssv2854020,nssv2854013,nssv2854022,nssv2854023,nssv2854019,nssv2854021,nssv2854016,nssv2854017 M 2366 0 11 "" NA18498,NA18861,NA18863,NA18923,NA18925,NA21447,NA21453,NA21455,NA21493,NA21494,NA21583 esv2758987 1 193204702 193209527 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756878 M 270 0 2 "" NA18861,NA18863 esv2421352 1 193204702 193211845 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5105546,essv5102606,essv5064475,essv5087663,essv5141746,essv5041470,essv5158624,essv5010687,essv5090729,essv5021532,essv5045511,essv5070555,essv5063516,essv5129658,essv5089204,essv5006790,essv5061809,essv5105120,essv5092356,essv5065598,essv5143291,essv5004491,essv5082513,essv5150435,essv5078602,essv5010319 M 1184 0 26 "" NA18498,NA18861,NA18863,NA18912,NA18923,NA18925,NA19334,NA19439,NA19457,NA19819,NA20349,NA20350,NA21297,NA21336,NA21378,NA21415,NA21436,NA21447,NA21448,NA21453,NA21455,NA21493,NA21494,NA21583,NA21632,NA21738 nsv441730 1 193204702 193213877 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656844,nssv1656843,nssv1656842 M 270 0 3 "" NA18861,NA18863,NA18912 esv2764239 1 193204702 193214091 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006798,essv7006776,essv7006791,essv7006785,essv7006790,essv7006795,essv7006786,essv7006802,essv7006799,essv7006784,essv7006788,essv7006796,essv7006787,essv7006797,essv7006783,essv7006777,essv7006782,essv7006774,essv7006792,essv7006779,essv7006801,essv7006793,essv7006794,essv7006781,essv7006775,essv7006780 M 1109 0 26 "" RW_0031,RW_0047,RW_0049,RW_0057,RW_0078,RW_0093,RW_0104,RW_0105,RW_0107,RW_0119,RW_0144,RW_0171,RW_0177,RW_0183,RW_0190,RW_0201,RW_0232,RW_0243,RW_0249,RW_0318,RW_0510,RW_0566,RW_0571,RW_0605,RW_0618,RW_0621 dgv500n100 1 193204702 193219545 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002079,nsv1004035,nsv1003753 M 29084 0 5 "" nsv1008736 1 193204702 193227287 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502189 M 29084 0 1 "" nsv515886 1 193271678 193285727 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv692441,nssv686061,nssv660551,nssv688609,nssv680761,nssv665143 M 2026 0 6 "" esv24667 1 193280577 193286328 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12756 M 40 0 1 "" NA15510 nsv441731 1 193280600 193285922 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656849,nssv1656846,nssv1656848,nssv1656845,nssv1656847 M 270 0 5 "" NA18577,NA18953,NA18970,NA18998,NA19005 nsv475108 1 193284921 193284921 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014912 M 9 1 0 "" NA19240 nsv548703 1 193298040 193468824 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733903 M 17421 1 0 "" nsv1007637 1 193303501 193321783 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493646 M 29084 1 0 "" nsv467160 1 193309000 193361603 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542526 M 1557 0 1 "" HGDP01323 nsv548704 1 193309000 193361603 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173987 M 17421 0 1 "" HGDP01323 esv2421573 1 193319225 193339540 CNV duplication Altshuler_et_al_2010 20811451 SNP array essv5099376,essv5120462,essv5084818,essv5025213,essv5110540,essv5140811,essv5065030,essv5144151,essv5084097,essv5159210,essv5040061,essv5011246,essv5144237,essv5126555,essv5021105,essv5134311,essv5156747,essv5135312,essv5150895,essv5149799,essv5033574,essv5006565 M 1184 22 0 "" NA20301,NA20530,NA21303,NA21311,NA21320,NA21352,NA21365,NA21384,NA21385,NA21386,NA21387,NA21414,NA21435,NA21440,NA21442,NA21457,NA21476,NA21512,NA21514,NA21526,NA21527,NA21683 esv2762209 1 193319225 193339540 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006803 M 1109 1 0 "" RW_0218 esv2350559 1 193337023 193337420 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4923992 M 1 0 1 "" NA18507 nsv467172 1 193349361 193452046 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542528 M 1557 0 1 "" 1780862598_A nsv548705 1 193349361 193452046 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173988 M 17421 0 1 "" 1780862598_A nsv3977 1 193349822 193384930 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv402 M 9 1 0 "" NA19240 dgv263e59 1 193350903 193351057 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302573,esv3302830 M 185 32 0 "" NA07051,NA07357,NA11829,NA12003,NA12144,NA12155,NA12249,NA12489,NA12717,NA12776,NA12828,NA12878,NA12891,NA12892,NA18502,NA18523,NA18542,NA18552,NA18562,NA18564,NA18573,NA18582,NA18603,NA18605,NA18853,NA18856,NA18858,NA18948,NA18965,NA19099,NA19239,NA19240 esv3324002 1 193350910 193351053 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670856,essv8670859,essv8670858,essv8670857,essv8670860 M 185 5 0 "" NA12878,NA12891,NA12892,NA19239,NA19240 dgv92n67 1 193354585 193357699 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825908,nsv825920 M 31 0 4 "" AK18,NA18542,NA18564,NA18969 nsv528855 1 193379326 193412546 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705534 M 2026 0 1 "" nsv1012194 1 193379810 193412553 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492774 M 29084 0 1 "" dgv727n54 1 193410943 193412465 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548706,nsv548707 M 17421 0 2 "" esv23243 1 193410966 193412542 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13215 M 40 0 1 "" NA11993 nsv548708 1 193433534 193533695 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173989 M 17421 0 1 "" 1798860071_A dgv52n27 1 193433534 193547047 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467183,nsv467194 M 1557 0 2 "" 1780862001_A,1798860071_A nsv470766 1 193458316 193643595 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544385 M 443 0 1 "" HGDP00864 dgv53n27 1 193489203 193653520 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467205,nsv467216 M 1557 2 0 "" HGDP00700,HGDP00737 dgv728n54 1 193489203 193653520 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548710,nsv548712,nsv548709 M 17421 3 0 "" HGDP00700,HGDP00737 nsv470767 1 193489203 193653520 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544386 M 443 1 0 "" HGDP00700 nsv548711 1 193493084 193570098 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733906 M 17421 0 1 "" nsv467227 1 193498690 193547047 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542570 M 1557 0 1 "" HGDP00141 nsv548713 1 193498690 193547047 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173992 M 17421 0 1 "" HGDP00141 dgv54n27 1 193514061 193570098 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467249,nsv467238 M 1557 0 2 "" 1782681295_A,HGDP00146 dgv729n54 1 193514061 193570098 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548714,nsv548715 M 17421 0 2 "" 1782681295_A,HGDP00146 esv2758988 1 193522550 193846835 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757764 M 270 1 0 "" NA19154 esv3446858 1 193525603 193525622 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597725 M 185 1 0 "" NA07347 nsv467260 1 193539719 193606974 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542597 M 1557 0 1 "" 1780854299_A nsv548716 1 193539719 193606974 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173995 M 17421 0 1 "" 1780854299_A esv6709 1 193545592 193545769 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29150 M 1 0 0 "" nsv1009812 1 193551053 193704659 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489492 M 29084 0 1 "" nsv523106 1 193563750 193579730 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698803 M 2026 0 1 "" nsv508058 1 193614244 193620244 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618519 M 4 0 0 "" CHM esv3890971 1 193616776 193643595 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25799998 M 3017 0 1 "" esv22005 1 193626367 193631867 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15951 M 40 0 1 "" NA18523 nsv516252 1 193629627 193630035 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv667077,nssv675919 M 2026 0 2 "" esv3890982 1 193632999 193693031 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25782943 M 3017 0 1 "" nsv520255 1 193638023 193643595 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697310 M 2026 0 1 "" nsv8635 1 193674157 193687457 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23707,nssv23990 M 31 0 2 "" NA18504,NA19240 esv2421828 1 193676328 193682368 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5057820,essv5095569,essv5002936,essv5075769,essv5066895,essv5038365,essv5027970,essv5019058,essv5116615,essv5136325,essv5152164,essv5060218,essv5090612,essv5069851,essv5083643,essv5024823,essv5013793,essv5007537,essv5138200,essv5054205,essv5016964,essv5128885,essv5071460,essv5073752 M 1184 0 24 "" NA18487,NA18488,NA18504,NA18516,NA18855,NA18868,NA18869,NA18874,NA18914,NA19028,NA19031,NA19096,NA19097,NA19116,NA19120,NA19238,NA19240,NA19317,NA19385,NA19445,NA19678,NA19680,NA19914,NA20291 nsv442547 1 193676328 193682368 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1619212,nssv1619213,nssv1619211,nssv1619210,nssv1619221,nssv1619214,nssv1619217,nssv1619215,nssv1619218,nssv1619219,nssv1619220,nssv1619209,nssv1619216 M 270 2 11 "" NA18503,NA18504,NA18515,NA18516,NA18855,NA18913,NA18914,NA19116,NA19120,NA19152,NA19209,NA19238,NA19240 esv23081 1 193676715 193681254 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12901 M 40 0 1 "" NA19240 nsv514030 1 193676864 193680096 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2855139,nssv2855142,nssv2855138,nssv2855143,nssv2854024,nssv2855141,nssv2854028,nssv2855144,nssv2854027,nssv2855145,nssv2854026,nssv2855146,nssv2854025,nssv2855140,nssv2854029,nssv2855137 M 2366 0 16 "" NA18485,NA18487,NA18488,NA18503,NA18504,NA18516,NA18855,NA18868,NA18869,NA18874,NA18908,NA19096,NA19097,NA19116,NA19120,NA19240 dgv501n100 1 193703894 193744936 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009965,nsv1012834 M 29084 2 0 "" nsv524595 1 193713909 193715393 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700555 M 2026 0 1 "" nsv477700 1 193736839 193736839 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016156 M 9 1 0 "" NA18517 nsv1010331 1 193743320 193821710 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493176 M 29084 1 0 "" nsv1012077 1 193744174 193836237 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704874 M 29084 0 1 "" nsv476168 1 193754995 193754995 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017432 M 9 1 0 "" NA12878 nsv832226 1 193776648 193945479 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441605 M 95 0 1 "" esv29297 1 193792850 193798040 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17413 M 40 0 1 "" NA18511 nsv525247 1 193793701 193843003 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701340 M 2026 0 1 "" esv2616501 1 193806571 193808066 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5352380 M 1 0 1 "" NA18507 nsv508684 1 193810758 193815383 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622783 M 4 0 1 "" NA18994 nsv509568 1 193823809 193860680 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623806 M 4 1 0 "" NA18994 nsv947460 1 193913248 193956201 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761686 M 97 1 0 "" HGDP00542 nsv467271 1 193915986 193953824 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542608 M 1557 1 0 "" HGDP00542 nsv548717 1 193915986 193953824 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173996 M 17421 1 0 "" HGDP00542 nsv1007203 1 193939480 194168983 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704875 M 29084 1 0 "" nsv475081 1 193954962 193954962 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018983 M 9 1 0 "" NA18956 nsv825931 1 193965582 193966333 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431858 M 31 1 0 "" AK20 esv2762211 1 194000936 194007726 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006804 M 1109 0 1 "" RW_0666 nsv998365 1 194022357 194046572 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498971 M 29084 1 0 "" nsv1014402 1 194058712 194143879 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3704876 M 29084 1 0 "" esv3405522 1 194061559 194061643 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902610,essv8902612,essv8902611 M 185 3 0 "" NA19114,NA19147,NA19225 esv3305506 1 194061599 194061600 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7747080,essv7745523,essv7747879 M 185 3 0 "" NA19114,NA19147,NA19225 esv2762212 1 194063704 194087513 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006805 M 1109 1 0 "" RW_0028 esv2758989 1 194070387 194386077 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756879,esv2757765 M 270 1 4 "" NA10860,NA12248,NA12814,NA18603,NA18969 nsv470768 1 194070767 194138918 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544387,nssv544389 M 443 0 2 "" HGDP01199,HGDP01226 nsv8646 1 194073998 194083144 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv26389,nssv23700,nssv24008,nssv24293,nssv27935 M 31 0 5 "" NA18564,NA18942,NA18972,NA18975,NA19240 dgv502n100 1 194086960 194143602 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010327,nsv999005,nsv1004106,nsv1004411,nsv1009478,nsv1006423,nsv1007929,nsv1005644 M 29084 0 31 "" nsv825942 1 194087487 194088220 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440854 M 31 0 1 "" NA18969 esv2760075 1 194095134 194141530 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7003412,essv7003400 M 1109 0 2 "" SW_0593,SW_1455 nsv520252 1 194097653 194138918 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682532,nssv685236,nssv705379,nssv701920,nssv679938,nssv662120 M 2026 0 6 "" dgv730n54 1 194097653 194141011 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548728,nsv548719,nsv548727,nsv548722,nsv548720,nsv548725,nsv548726,nsv548724,nsv548718,nsv548723 M 17421 0 15 "" 1780854128_A nsv548721 1 194097653 194148082 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733913 M 17421 0 1 "" nsv467284 1 194098876 194135746 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542621 M 1557 0 1 "" 1780854128_A nsv8658 1 194099267 194102370 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23387 M 31 0 1 "" NA18860 nsv999296 1 194103953 194141530 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500058 M 29084 0 1 "" nsv548729 1 194118756 194133073 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733923 M 17421 0 1 "" dgv731n54 1 194119587 194141011 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548733,nsv548730,nsv548732,nsv548731 M 17421 0 6 "" 1780854401_A,HGDP01226 nsv8669 1 194119821 194123099 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv27297 M 31 0 1 "" NA19221 dgv55n27 1 194119842 194138918 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467317,nsv467328 M 1557 0 2 "" 1780854401_A,HGDP01226 nsv548734 1 194125645 194141479 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733928 M 17421 0 1 "" nsv525153 1 194133073 194197619 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701225 M 2026 1 0 "" esv35094 1 194140966 194286966 CNV gain Pinto_et_al_2007 17911159 SNP array essv6980209,essv6987036,essv6980210 M 771 3 0 "" NA18969 nsv825953 1 194148904 194150073 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434213 M 31 0 1 "" NA18570 nsv548735 1 194150484 194176323 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733929 M 17421 0 1 "" nsv825964 1 194164899 194282303 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440855 M 31 1 0 "" NA18969 dgv732n54 1 194168299 194244116 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548737,nsv548736 M 17421 0 2 "" nsv470769 1 194168299 194454288 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544390,nssv544391 M 443 0 2 "" HGDP00877,HGDP01267 nsv467339 1 194179202 194385933 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542658 M 1557 0 1 "" HGDP01267 nsv548738 1 194179202 194385933 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174000 M 17421 0 1 "" HGDP01267 nsv516448 1 194195172 194195839 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv676919,nssv668468,nssv658551 M 2026 3 0 "" nsv525903 1 194195839 194197619 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702107 M 2026 1 0 "" nsv467350 1 194216906 194258256 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542668 M 1557 0 1 "" HGDP01238 nsv467361 1 194239910 194270398 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542677 M 1557 0 1 "" HGDP01330 nsv548739 1 194239910 194270398 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174001 M 17421 0 1 "" HGDP01330 nsv548740 1 194264186 194300158 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733932 M 17421 0 1 "" nsv8680 1 194270654 194278071 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22437 M 31 0 1 "" NA19132 nsv3988 1 194279134 194313676 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3621 M 9 1 0 "" NA12878 nsv825975 1 194284607 194287555 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428858 M 31 0 1 "" AK12 esv1079277 1 194420170 194420170 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4177021 M 2 1 0 "" HuRef esv1182970 1 194424682 194424959 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4188176 M 2 0 1 "" HuRef esv1007482 1 194424682 194425045 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563967 M 3 0 1 "" HuRef nsv548741 1 194453373 194560116 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733933 M 17421 0 1 KCNT2 nsv832237 1 194472297 194595123 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441606 M 95 1 0 KCNT2 nsv469680 1 194526469 194685639 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1675059 M 265 1 0 KCNT2 nsv477253 1 194540549 194540549 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011104 M 9 1 0 KCNT2 NA18517 nsv548742 1 194606278 194658489 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733934 M 17421 0 1 KCNT2 esv1430984 1 194672852 194672852 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3715872 M 2 1 0 KCNT2 HuRef esv2762213 1 194721988 194722447 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006806 M 1109 0 1 KCNT2 RW_0603 nsv508685 1 194790653 194817603 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618997 M 4 0 1 KCNT2 NA10860 nsv528460 1 194809190 195713325 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705062 M 2026 1 0 ASPM,CFH,CFHR1,CFHR2,CFHR3,CFHR4,CFHR5,CRB1,F13B,KCNT2,MIR4735,ZBTB41 esv1933670 1 194813744 194814171 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4830445 M 1 0 1 KCNT2 NA18507 nsv477628 1 194834806 194834806 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014193 M 9 1 0 KCNT2 NA18517 nsv428290 1 194857460 195228425 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv452842,nssv452698,nssv452675,nssv452809,nssv452687 M 62 1 4 CFH,CFHR1,CFHR2,CFHR3,CFHR4,CFHR5 HGDP01094,NA18916,NA19096,NA19108,NA19147 esv2758990 1 194857460 195436395 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756880,esv2757766,esv2757767 M 270 43 46 ASPM,CFH,CFHR1,CFHR2,CFHR3,CFHR4,CFHR5,F13B,ZBTB41 NA07000,NA07048,NA07055,NA10831,NA10854,NA10856,NA10859,NA11839,NA11840,NA11881,NA11993,NA11994,NA12003,NA12005,NA12056,NA12154,NA12707,NA12716,NA12750,NA12760,NA12762,NA12763,NA12812,NA12814,NA12864,NA12873,NA12875,NA18502,NA18503,NA18505,NA18506,NA18507,NA18517,NA18521,NA18522,NA18526,NA18529,NA18532,NA18563,NA18594,NA18611,NA18621,NA18622,NA18624,NA18635,NA18855,NA18861,NA18863,NA18870,NA18871,NA18872,NA18913,NA18949,NA18951,NA18953,NA18956,NA18971,NA18981,NA18987,NA18991,NA18998,NA19000,NA19003,NA19007,NA19098,NA19099,NA19100,NA19101,NA19119,NA19128,NA19130,NA19131,NA19132,NA19138,NA19139,NA19142,NA19143,NA19144,NA19145,NA19171,NA19173,NA19193,NA19201,NA19204,NA19210,NA19221,NA19223,NA19238,NA19240 nsv825986 1 194866523 194869392 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437259 M 31 0 1 "" NA18949 esv29712 1 194869365 194870659 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17409 M 40 0 1 "" NA11993 nsv818733 1 194908856 194926884 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417376 M 112 1 0 CFH NA18944 nsv477921 1 194910348 194910348 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017512 M 9 1 0 CFH NA18517 nsv548743 1 194915092 194918688 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733936,nssv733935 M 17421 0 2 CFH nsv818744 1 194918455 194926884 CNV gain Wang_et_al_2007 17921354 SNP array nssv1418249 M 112 1 0 CFH NA19092 nsv825997 1 194919587 194921083 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423996 M 31 0 1 CFH NA18582 nsv548744 1 194923240 194923360 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733937 M 17421 0 1 CFH nsv548745 1 194923687 194927618 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733939,nssv733938 M 17421 2 0 CFH nsv548746 1 194925386 194927588 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733940 M 17421 0 1 CFH nsv548747 1 194925801 194937380 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733941 M 17421 1 0 CFH esv1247490 1 194928478 194928478 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4300078 M 2 1 0 CFH HuRef nsv469810 1 194936133 195082994 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1672294,nssv1672974,nssv1676632 M 265 0 3 CFH,CFHR1,CFHR3 nsv471614 1 194936134 195221853 CNV gain+loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv549511,nssv550686,nssv549501,nssv549513,nssv549507,nssv549508,nssv550687,nssv549502,nssv549506,nssv549512,nssv549503,nssv549504,nssv550689,nssv549505,nssv549510,nssv550688,nssv549509 M 48 2 11 CFH,CFHR1,CFHR2,CFHR3,CFHR4,CFHR5 JK1051A,JK1058B,JK1061,JK776,NA10469,NA10470,NA10471,NA10472,NA10493,NA10496,NA15729,NA17014,P86GA dgv503n100 1 194946078 195083341 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007752,nsv1004934,nsv1000910,nsv1010624 M 29084 5 0 CFH,CFHR1,CFHR3 nsv548748 1 194959291 194962905 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733942 M 17421 1 0 CFH dgv504n100 1 194964853 195120130 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005093,nsv1012228,nsv1005907,nsv1006109,nsv1001242,nsv1005452,nsv1014500,nsv1014771,nsv1002377,nsv1008192,nsv1006453 M 29084 18 0 CFH,CFHR1,CFHR3 dgv505n100 1 194971620 195068683 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000415,nsv1005246,nsv1014427,nsv1002523,nsv1000027,nsv1007854,nsv1002645,nsv997398,nsv1001990,nsv999725,nsv1008147,nsv1013124,nsv999039,nsv1005364,nsv1007461 M 29084 22 0 CFH,CFHR1,CFHR3 nsv548749 1 194971638 194973669 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733943 M 17421 0 1 CFH dgv506n100 1 194973300 195037748 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008005,nsv1009750,nsv1003137,nsv1008567,nsv997480,nsv1011322 M 29084 11 0 CFH,CFHR3 nsv826008 1 194975094 195095411 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1439497,nssv1422405,nssv1435688,nssv1421494,nssv1434900 M 31 0 5 CFH,CFHR1,CFHR3 NA18537,NA18552,NA18566,NA18942,NA18997 dgv507n100 1 194975846 195055693 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997593,nsv998323,nsv1008478,nsv1013954,nsv1013103 M 29084 0 8 CFH,CFHR1,CFHR3 dgv508n100 1 194976371 195079141 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011310,nsv999556,nsv1007127 M 29084 0 3 CFH,CFHR1,CFHR3 esv3584613 1 194976383 195068695 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838763 M 34 0 1 CFH,CFHR1,CFHR3 B10 esv26552 1 194976941 195185893 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19830,esv17256,esv17551,esv20484,esv12084 M 40 15 11 CFH,CFHR1,CFHR2,CFHR3,CFHR4 NA06985,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12239,NA12287,NA12414,NA12489,NA12776,NA12878,NA15510,NA18502,NA18505,NA18511,NA18517,NA18861,NA18916,NA19099,NA19108,NA19114,NA19147,NA19240 nsv8691 1 194977387 195194521 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv27417,nssv23393,nssv20755,nssv20090,nssv22757,nssv23998,nssv21399,nssv26872,nssv24893,nssv26562,nssv27036,nssv26721,nssv23059,nssv21396,nssv26732,nssv26851,nssv23697,nssv27529,nssv26717,nssv23075,nssv24295,nssv24898,nssv24302,nssv21066,nssv26558,nssv27639,nssv24583,nssv22745,nssv22750,nssv22765,nssv22095,nssv25173,nssv26385,nssv19768,nssv19438,nssv20739,nssv24592,nssv24001,nssv23369,nssv19760,nssv22422,nssv23083,nssv21395,nssv25453,nssv21400,nssv28153,nssv28018,nssv28103,nssv21069,nssv21760,nssv21761 M 31 15 10 CFH,CFHR1,CFHR2,CFHR3,CFHR4 NA07048,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18517,NA18537,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19132,NA19144,NA19173,NA19221,NA19240 dgv509n100 1 194977690 195037748 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013770,nsv1005934,nsv1008538,nsv1014035 M 29084 6 9 CFH,CFHR3 nsv1003733 1 194977690 195050237 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487455,nssv3488223 M 29084 1 1 CFH,CFHR3 dgv510n100 1 194977690 195083341 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011025,nsv1010132,nsv1001155 M 29084 70 5 CFH,CFHR1,CFHR3 dgv733n54 1 194977690 195168376 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548750,nsv548765,nsv548771 M 17421 0 3 CFH,CFHR1,CFHR3,CFHR4 dgv511n100 1 194977690 195183410 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005164,nsv1004879,nsv1012935,nsv1000664 M 29084 4 0 CFH,CFHR1,CFHR2,CFHR3,CFHR4 nsv517662 1 194977690 195204159 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv682460,nssv670627,nssv661893,nssv680461,nssv654746,nssv656134,nssv654398,nssv690431,nssv683794,nssv682103,nssv658117,nssv683875,nssv657391,nssv672822,nssv690860,nssv662830,nssv686247,nssv674229,nssv668873,nssv663315,nssv690907,nssv681662,nssv693421,nssv686478,nssv658360,nssv683373,nssv654895,nssv672911,nssv675277,nssv654942,nssv670751,nssv680789,nssv662553,nssv678800,nssv683502,nssv668040,nssv653014,nssv668121,nssv688588,nssv661866,nssv672882,nssv691800,nssv693684,nssv672958,nssv682278,nssv660533,nssv672206,nssv659933,nssv660285,nssv663228,nssv682511,nssv665964,nssv677519,nssv661312,nssv676100,nssv672723,nssv671425,nssv691509,nssv676069,nssv683833,nssv671682,nssv683039,nssv692864,nssv687921,nssv652755,nssv668575,nssv692982,nssv667438,nssv688785,nssv667817,nssv659463,nssv701939,nssv666065,nssv678060,nssv680731,nssv651925,nssv656959,nssv683756,nssv662918,nssv654769,nssv681886,nssv656317,nssv681618,nssv654982,nssv686574,nssv680369,nssv685788,nssv673198,nssv666917,nssv655141,nssv675192,nssv684708,nssv689994,nssv682340,nssv690089,nssv673551,nssv691893,nssv654208,nssv691995,nssv667636,nssv663103,nssv693393,nssv665742,nssv672799 M 2026 7 97 CFH,CFHR1,CFHR2,CFHR3,CFHR4 dgv734n54 1 194977805 195089653 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548764,nsv548761,nsv548762,nsv548763,nsv548760,nsv548751,nsv548769,nsv548768,nsv548759,nsv548753 M 17421 0 12 CFH,CFHR1,CFHR3 dgv735n54 1 194977806 195002249 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548752,nsv548756 M 17421 0 2 CFH esv1001500 1 194977976 195095855 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565522 M 3 0 1 CFH,CFHR1,CFHR3 HuRef nsv946555 1 194978629 195015415 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811708,nssv1811725,nssv1811715,nssv1811724,nssv1811694,nssv1811716,nssv1811703,nssv1811745,nssv1811691,nssv1811714,nssv1811689,nssv1811742,nssv1811758,nssv1811729,nssv1811687,nssv1811723,nssv1811692,nssv1811738,nssv1811690,nssv1811735,nssv1811693,nssv1811737,nssv1811701,nssv1811750,nssv1811699,nssv1811749,nssv1811698,nssv1811736,nssv1811709,nssv1811746,nssv1811757,nssv1811711,nssv1811712,nssv1811747,nssv1811705,nssv1811730,nssv1811754,nssv1811728,nssv1811706,nssv1811707,nssv1811760,nssv1811740,nssv1811762,nssv1811710,nssv1811756,nssv1811743,nssv1811695,nssv1811739,nssv1811696,nssv1811734,nssv1811713,nssv1811720,nssv1811755,nssv1811726,nssv1811763,nssv1811717,nssv1811700,nssv1811748,nssv1811704,nssv1811753,nssv1811685,nssv1811741,nssv1811702,nssv1811751,nssv1811759,nssv1811719,nssv1811686,nssv1811722,nssv1811761,nssv1811733,nssv1811688,nssv1811744,nssv1811697,nssv1811731,nssv1811684,nssv1811721,nssv1811752,nssv1811718,nssv1811732,nssv1811727 M 97 10 0 CFH,CFHR3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548754 1 194978880 194982697 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733951,nssv733949,nssv733950 M 17421 0 3 CFH nsv548755 1 194978880 194984447 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733952 M 17421 0 1 CFH dgv736n54 1 194978880 195054565 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548770,nsv548758,nsv548757 M 17421 0 3 CFH,CFHR3 esv3891026 1 194979219 195087039 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25797187,essv25792841,essv25786257,essv25779373,essv25787581,essv25779151,essv25785574,essv25779116 M 3017 1 7 CFH,CFHR1,CFHR3 nsv471393 1 194979967 195005989 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548189,nssv548200 M 3 2 0 CFH JDW,YH nsv1010268 1 194981433 195015828 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493094 M 29084 1 0 CFH,CFHR3 dgv512n100 1 194981433 195028677 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998564,nsv1014311,nsv999388,nsv1002459 M 29084 0 7 CFH,CFHR3 nsv819563 1 194983118 195078925 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418766 M 2 1 0 CFH,CFHR1,CFHR3 AK1 nsv436214 1 194983337 195066235 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465868 M 2 0 1 CFHR1,CFHR3 NA18505 nsv820836 1 194983700 195088441 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420824 M 1 0 1 CFHR1,CFHR3 NA10851 nsv3999 1 194984098 195187683 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6046,nssv4885,nssv10420,nssv9650,nssv2644,nssv9383 M 9 0 6 CFHR1,CFHR2,CFHR3,CFHR4 NA12156,NA18507,NA18517,NA18555,NA18956,NA19129 esv3891004 1 194984260 195168376 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25798712,essv25779955,essv25789355,essv25798863,essv25799147,essv25789867,essv25790283,essv25791045 M 3017 4 4 CFHR1,CFHR3,CFHR4 nsv548766 1 194984260 195168376 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733964 M 17421 1 0 CFHR1,CFHR3,CFHR4 nsv548767 1 194988631 195034610 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733965 M 17421 0 1 CFHR3 nsv498700 1 194988828 195075129 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585414 M 9 0 1 CFHR1,CFHR3 nsv433191 1 194989670 195037748 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463072 M 9 0 1 CFHR3 NA18517 esv2421560 1 194989670 195082414 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5120017,essv5017700,essv5118918,essv5004978,essv5142821,essv5077068,essv5124505,essv5055458,essv5160673,essv5146716,essv5036609,essv5084394,essv5047573,essv5082058,essv5095167,essv5141808,essv5046257,essv5133293,essv5099578,essv5097436,essv5131206,essv5124140,essv5070259,essv5158335,essv5120359,essv5120210,essv5017367,essv5104161,essv5117262,essv5123149,essv5130160,essv5029114,essv5143826,essv5022881,essv5142243,essv5104016,essv5097467,essv5130321,essv5136131,essv5158092,essv5006873,essv5105169,essv5089671,essv5117709,essv5078710,essv5094253,essv5079242,essv5107261,essv5070937,essv5031780,essv5023892,essv5024018,essv5093914,essv5127887,essv5154295,essv5002696,essv5057140,essv5042839,essv5099511,essv5112773,essv5026807,essv5052676,essv5064115,essv5080543,essv5008733,essv5062839,essv5068698,essv5142566,essv5033913,essv5027318,essv5026623,essv5013564,essv5122400,essv5030870,essv5143761,essv5092145,essv5146146,essv5160231,essv5127227,essv5026464,essv5145366,essv5015232,essv5136144,essv5080491,essv5131187,essv5108687,essv5091081,essv5088778,essv5059632,essv5022685,essv5134114,essv5057285,essv5058304,essv5154545,essv5028233,essv5040381,essv5159490,essv5048551,essv5048011,essv5085745,essv5132718,essv5024738,essv5075275,essv5153909,essv5061258,essv5081774,essv5018385,essv5084169,essv5037390,essv5059820,essv5122283,essv5069456,essv5097328,essv5108477,essv5093323,essv5114725,essv5117770,essv5094659,essv5083961,essv5049750,essv5110920,essv5005087,essv5009469,essv5023001,essv5140692,essv5062203,essv5058151,essv5144050,essv5070147,essv5047401,essv5079894,essv5061837,essv5018774,essv5065674,essv5134088,essv5145460,essv5031209,essv5004676,essv5084345,essv5046367,essv5135347,essv5105527,essv5023372,essv5098270,essv5052418,essv5028943,essv5041289,essv5032492,essv5149578,essv5112739,essv5123808,essv5025321,essv5151876,essv5124563,essv5072310,essv5044793,essv5063907,essv5053887,essv5091671,essv5010243,essv5026832,essv5026850,essv5098970,essv5019675,essv5017467,essv5057430,essv5159012,essv5086103,essv5130781,essv5061154,essv5079049,essv5154002,essv5047141,essv5021239,essv5125756,essv5015513,essv5041215,essv5019910,essv5158248,essv5100895,essv5044728,essv5061089,essv5018273,essv5083644,essv5131804,essv5066386,essv5111879,essv5113078,essv5036801,essv5132676,essv5099008,essv5159754,essv5090307,essv5030097,essv5054811,essv5133415,essv5084872,essv5142794,essv5015431,essv5048674,essv5097734,essv5156194,essv5141211,essv5022840,essv5088799,essv5079815,essv5060374,essv5006765,essv5022814,essv5040903,essv5056528,essv5140518,essv5158473,essv5151066,essv5096053,essv5102933,essv5043383,essv5033675,essv5111517,essv5018319,essv5150521,essv5049199,essv5153708,essv5068338,essv5088355,essv5111476,essv5031761,essv5034931,essv5058554,essv5125226,essv5098352,essv5151785,essv5094345,essv5025438,essv5040775,essv5112056,essv5114621,essv5030802,essv5102940,essv5112319,essv5085335,essv5109145,essv5026457,essv5128027,essv5069878,essv5069577,essv5107278,essv5119020,essv5009741,essv5143672,essv5132126,essv5141015,essv5157080,essv5107268,essv5039855,essv5153808,essv5042924,essv5122284,essv5045136,essv5056846,essv5010211,essv5065002,essv5056440,essv5119553,essv5050329,essv5059563,essv5107569,essv5032415,essv5010501,essv5048601,essv5139239,essv5109304,essv5088468,essv5020575,essv5069726,essv5097310,essv5135208,essv5079375,essv5024308,essv5137966,essv5152426,essv5094100,essv5042447,essv5118413,essv5153795,essv5072391,essv5053433,essv5127318,essv5123211,essv5075731,essv5028006,essv5051600,essv5008305,essv5143675,essv5130606,essv5109563,essv5151521,essv5156557,essv5154683,essv5112916,essv5009277,essv5126830,essv5060740,essv5076996,essv5058165,essv5052564,essv5030693,essv5067375,essv5106742,essv5011576,essv5043335,essv5124691,essv5087509,essv5125770,essv5029634,essv5153089,essv5143224,essv5102741,essv5019414,essv5051225,essv5128661,essv5149294,essv5051454,essv5083436,essv5035156,essv5098710,essv5002950,essv5120506,essv5055269,essv5007145,essv5140139,essv5045823,essv5131577,essv5132847,essv5076719,essv5150140,essv5085664,essv5017551,essv5115701,essv5066689,essv5117189,essv5088193,essv5067190,essv5014669,essv5059571,essv5025273,essv5121665,essv5146563,essv5066236,essv5109619,essv5039160,essv5111193,essv5083703,essv5033300,essv5111284,essv5085784,essv5158921,essv5106730,essv5065529,essv5141294,essv5107083,essv5155275,essv5121464,essv5131437,essv5150490,essv5090132,essv5120825,essv5058393,essv5055808,essv5084237,essv5003444,essv5135199,essv5002687,essv5116877,essv5151691,essv5145322,essv5021984,essv5127637,essv5094300,essv5019919,essv5136451,essv5101414,essv5095089,essv5057906,essv5141054,essv5148199,essv5069106,essv5036334,essv5128726,essv5107686,essv5159194,essv5082177,essv5041576,essv5155424,essv5011899,essv5143568,essv5144857,essv5158446,essv5036538,essv5047038,essv5054735,essv5013771,essv5113626,essv5018808,essv5009043,essv5056134,essv5054225,essv5131729,essv5159431,essv5026309,essv5087151,essv5037029,essv5149326,essv5157218,essv5106121,essv5114914,essv5013134,essv5063506,essv5003917,essv5137267,essv5147461,essv5067539,essv5073224,essv5073271,essv5139502,essv5004679,essv5035584,essv5060410,essv5031776,essv5022899,essv5081478,essv5068712,essv5122391,essv5027584,essv5020164,essv5136176,essv5085540,essv5078176,essv5009235,essv5046823,essv5045039,essv5010064,essv5117840,essv5014237,essv5141879,essv5098576,essv5066962,essv5085205,essv5045795,essv5115916,essv5104838,essv5062305,essv5082912,essv5025386,essv5017982,essv5029214,essv5008825,essv5142639,essv5014941,essv5060567,essv5008445,essv5142026,essv5121484,essv5104904,essv5009908,essv5041151,essv5079295,essv5094859,essv5131617,essv5104625,essv5049402,essv5073819,essv5014943,essv5105540,essv5090714,essv5140528,essv5138460,essv5049775,essv5062409,essv5153243,essv5120108,essv5130268,essv5025044,essv5161085,essv5040604,essv5065062,essv5127192,essv5064189,essv5101112,essv5159908,essv5127969,essv5031642,essv5144855,essv5045360,essv5137612,essv5127121,essv5066979,essv5058349,essv5090722,essv5074099,essv5019232,essv5020491,essv5111008,essv5160066,essv5095378,essv5149561,essv5021737,essv5012447,essv5055591,essv5073159,essv5112230,essv5154303,essv5045371,essv5029166,essv5119089,essv5035275,essv5081445,essv5024687,essv5069925,essv5018589,essv5067739,essv5099270,essv5134875,essv5095678,essv5029956,essv5106668,essv5009271,essv5120930,essv5121228,essv5030025,essv5032528,essv5076168 M 1184 0 532 CFHR1,CFHR3 NA06984,NA06991,NA06993,NA06994,NA06995,NA07029,NA07037,NA07056,NA07435,NA10830,NA10835,NA10837,NA10839,NA10840,NA10843,NA10846,NA10854,NA10859,NA10865,NA11829,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11892,NA11917,NA11919,NA11920,NA11930,NA11993,NA12006,NA12044,NA12057,NA12144,NA12155,NA12156,NA12234,NA12249,NA12272,NA12273,NA12283,NA12287,NA12336,NA12340,NA12342,NA12343,NA12375,NA12386,NA12399,NA12413,NA12739,NA12748,NA12749,NA12753,NA12761,NA12763,NA12813,NA12828,NA12829,NA12865,NA12875,NA12889,NA12890,NA17968,NA17975,NA17979,NA17986,NA17996,NA18112,NA18125,NA18132,NA18153,NA18157,NA18159,NA18485,NA18487,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18515,NA18516,NA18517,NA18518,NA18519,NA18520,NA18537,NA18545,NA18552,NA18555,NA18563,NA18566,NA18596,NA18597,NA18608,NA18614,NA18616,NA18623,NA18628,NA18634,NA18642,NA18643,NA18674,NA18694,NA18748,NA18852,NA18854,NA18857,NA18858,NA18859,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18875,NA18909,NA18910,NA18911,NA18916,NA18923,NA18924,NA18925,NA18930,NA18933,NA18935,NA18942,NA18955,NA18961,NA18978,NA18994,NA18997,NA19007,NA19010,NA19027,NA19028,NA19035,NA19057,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19102,NA19103,NA19107,NA19109,NA19114,NA19115,NA19116,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19146,NA19147,NA19148,NA19149,NA19150,NA19152,NA19154,NA19159,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19176,NA19179,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19192,NA19193,NA19194,NA19198,NA19200,NA19202,NA19203,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19215,NA19221,NA19222,NA19223,NA19224,NA19225,NA19226,NA19235,NA19236,NA19237,NA19239,NA19247,NA19248,NA19249,NA19256,NA19257,NA19258,NA19307,NA19308,NA19309,NA19310,NA19311,NA19313,NA19316,NA19319,NA19328,NA19334,NA19346,NA19347,NA19352,NA19360,NA19376,NA19377,NA19380,NA19381,NA19382,NA19384,NA19385,NA19390,NA19391,NA19394,NA19397,NA19398,NA19399,NA19403,NA19428,NA19429,NA19430,NA19431,NA19434,NA19436,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19452,NA19457,NA19462,NA19466,NA19468,NA19469,NA19470,NA19473,NA19625,NA19650,NA19652,NA19653,NA19657,NA19659,NA19665,NA19669,NA19676,NA19700,NA19701,NA19702,NA19703,NA19704,NA19705,NA19708,NA19713,NA19714,NA19719,NA19723,NA19755,NA19757,NA19779,NA19781,NA19782,NA19784,NA19789,NA19790,NA19795,NA19796,NA19818,NA19835,NA19836,NA19901,NA19904,NA19908,NA19914,NA19915,NA19917,NA19983,NA19985,NA20126,NA20128,NA20129,NA20276,NA20277,NA20279,NA20281,NA20282,NA20284,NA20289,NA20290,NA20291,NA20292,NA20295,NA20297,NA20301,NA20302,NA20317,NA20319,NA20322,NA20332,NA20333,NA20341,NA20342,NA20343,NA20344,NA20346,NA20349,NA20356,NA20358,NA20360,NA20504,NA20505,NA20508,NA20509,NA20510,NA20516,NA20518,NA20534,NA20538,NA20540,NA20581,NA20588,NA20589,NA20752,NA20754,NA20755,NA20756,NA20758,NA20765,NA20766,NA20768,NA20769,NA20771,NA20773,NA20778,NA20783,NA20785,NA20786,NA20795,NA20800,NA20802,NA20811,NA20812,NA20816,NA20818,NA20819,NA20828,NA20846,NA20847,NA20850,NA20851,NA20852,NA20853,NA20859,NA20861,NA20866,NA20870,NA20872,NA20873,NA20875,NA20877,NA20881,NA20882,NA20883,NA20884,NA20885,NA20887,NA20888,NA20891,NA20892,NA20895,NA20896,NA20897,NA20900,NA20901,NA20902,NA20903,NA20907,NA20908,NA20909,NA20910,NA20911,NA21086,NA21089,NA21090,NA21097,NA21098,NA21100,NA21101,NA21103,NA21106,NA21108,NA21111,NA21112,NA21115,NA21116,NA21118,NA21137,NA21141,NA21144,NA21295,NA21302,NA21303,NA21307,NA21313,NA21316,NA21317,NA21333,NA21336,NA21339,NA21353,NA21355,NA21362,NA21363,NA21364,NA21370,NA21379,NA21381,NA21382,NA21383,NA21391,NA21400,NA21401,NA21402,NA21404,NA21405,NA21417,NA21418,NA21420,NA21423,NA21424,NA21425,NA21438,NA21439,NA21441,NA21442,NA21453,NA21454,NA21475,NA21479,NA21486,NA21489,NA21490,NA21491,NA21494,NA21513,NA21517,NA21519,NA21522,NA21524,NA21528,NA21573,NA21574,NA21575,NA21577,NA21596,NA21600,NA21611,NA21614,NA21615,NA21616,NA21619,NA21631,NA21635,NA21636,NA21647,NA21648,NA21678,NA21689,NA21693,NA21719,NA21733,NA21741,NA21768,NA21776,NA21784,NA21825 esv2630480 1 194992824 195078536 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5335214 M 1 0 1 CFHR1,CFHR3 NA18507 nsv548772 1 194994446 195002249 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733970 M 17421 0 1 "" dgv6e203 1 194994473 195206342 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array esv2760521,esv2764178 M 1109 15 222 CFHR1,CFHR2,CFHR3,CFHR4 RW_0014,RW_0020,RW_0025,RW_0039,RW_0050,RW_0053,RW_0062,RW_0074,RW_0080,RW_0085,RW_0090,RW_0092,RW_0093,RW_0113,RW_0123,RW_0124,RW_0126,RW_0129,RW_0131,RW_0134,RW_0139,RW_0146,RW_0156,RW_0164,RW_0169,RW_0178,RW_0179,RW_0183,RW_0188,RW_0190,RW_0201,RW_0203,RW_0209,RW_0224,RW_0226,RW_0237,RW_0248,RW_0256,RW_0260,RW_0262,RW_0266,RW_0268,RW_0274,RW_0275,RW_0283,RW_0292,RW_0300,RW_0302,RW_0321,RW_0322,RW_0324,RW_0326,RW_0330,RW_0335,RW_0344,RW_0353,RW_0357,RW_0512,RW_0524,RW_0526,RW_0539,RW_0541,RW_0544,RW_0545,RW_0558,RW_0566,RW_0567,RW_0568,RW_0583,RW_0584,RW_0590,RW_0591,RW_0594,RW_0595,RW_0599,RW_0603,RW_0606,RW_0609,RW_0612,RW_0617,RW_0618,RW_0620,RW_0636,RW_0643,RW_0646,RW_0648,RW_0662,RW_0666,SW_0002,SW_0003,SW_0006,SW_0007,SW_0018,SW_0029,SW_0030,SW_0031,SW_0043,SW_0076,SW_0089,SW_0091,SW_0100,SW_0102,SW_0113,SW_0160,SW_0170,SW_0171,SW_0189,SW_0198,SW_0201,SW_0203,SW_0215,SW_0240,SW_0241,SW_0244,SW_0254,SW_0354,SW_0370,SW_0505,SW_0509,SW_0538,SW_0568,SW_0569,SW_0576,SW_0582,SW_0583,SW_0585,SW_0586,SW_0589,SW_0590,SW_0592,SW_0605,SW_0606,SW_0618,SW_0624,SW_0625,SW_0634,SW_0636,SW_0639,SW_0640,SW_0648,SW_0651,SW_0659,SW_0661,SW_0675,SW_0702,SW_0758,SW_0759,SW_0761,SW_0771,SW_0786,SW_0790,SW_0818,SW_0832,SW_0842,SW_0843,SW_0847,SW_0857,SW_0859,SW_0884,SW_0888,SW_0889,SW_0892,SW_1000,SW_1009,SW_1029,SW_1030,SW_1031,SW_1057,SW_1062,SW_1063,SW_1065,SW_1070,SW_1071,SW_1074,SW_1077,SW_1096,SW_1102,SW_1113,SW_1119,SW_1134,SW_1137,SW_1140,SW_1165,SW_1167,SW_1171,SW_1172,SW_1182,SW_1184,SW_1199,SW_1202,SW_1206,SW_1208,SW_1209,SW_1214,SW_1224,SW_1225,SW_1228,SW_1230,SW_1231,SW_1234,SW_1240,SW_1244,SW_1261,SW_1263,SW_1265,SW_1278,SW_1282,SW_1288,SW_1294,SW_1302,SW_1322,SW_1327,SW_1333,SW_1334,SW_1343,SW_1368,SW_1370,SW_1378,SW_1391,SW_1392,SW_1408,SW_1419,SW_1422,SW_1427,SW_1429,SW_1436,SW_1438,SW_1440,SW_1452,SW_1476,SW_1501,SW_1506,SW_1517,SW_1523,SW_1527,SW_1539 esv2652513 1 194996339 195090464 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5346390 M 1 0 1 CFHR1,CFHR3 NA18507 dgv8e180 1 194997658 195068695 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1001888,esv1002568 M 3 0 1 CFHR1,CFHR3 HuRef nsv442555 1 194997658 195068695 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619266,nssv1619223,nssv1619257,nssv1619230,nssv1619340,nssv1619293,nssv1619310,nssv1619305,nssv1619323,nssv1619304,nssv1619277,nssv1619270,nssv1619328,nssv1619308,nssv1619339,nssv1619299,nssv1619224,nssv1619297,nssv1619315,nssv1619248,nssv1619264,nssv1619262,nssv1619243,nssv1619306,nssv1619263,nssv1619282,nssv1619327,nssv1619307,nssv1619252,nssv1619245,nssv1619324,nssv1619296,nssv1619276,nssv1619273,nssv1619314,nssv1619338,nssv1619256,nssv1619229,nssv1619322,nssv1619242,nssv1619269,nssv1619287,nssv1619294,nssv1619246,nssv1619345,nssv1619232,nssv1619291,nssv1619260,nssv1619346,nssv1619254,nssv1619300,nssv1619231,nssv1619236,nssv1619288,nssv1619342,nssv1619289,nssv1619309,nssv1619247,nssv1619295,nssv1619281,nssv1619238,nssv1619320,nssv1619222,nssv1619311,nssv1619255,nssv1619331,nssv1619275,nssv1619313,nssv1619234,nssv1619321,nssv1619333,nssv1619326,nssv1619274,nssv1619225,nssv1619285,nssv1619334,nssv1619298,nssv1619268,nssv1619330,nssv1619272,nssv1619343,nssv1619329,nssv1619318,nssv1619280,nssv1619292,nssv1619278,nssv1619319,nssv1619235,nssv1619258,nssv1619286,nssv1619332,nssv1619226,nssv1619227,nssv1619261,nssv1619341,nssv1619316,nssv1619317,nssv1619283,nssv1619233,nssv1619279,nssv1619290,nssv1619336,nssv1619253,nssv1619251,nssv1619337,nssv1619302,nssv1619237,nssv1619244,nssv1619239,nssv1619284,nssv1619241,nssv1619259,nssv1619267,nssv1619312,nssv1619325,nssv1619271,nssv1619335,nssv1619250,nssv1619228,nssv1619303,nssv1619301,nssv1619249,nssv1619344,nssv1619265,nssv1619240 M 270 0 125 CFHR1,CFHR3 NA06991,NA06993,NA06994,NA07029,NA07056,NA10830,NA10835,NA10839,NA10846,NA10851,NA10857,NA10859,NA10860,NA11829,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11993,NA12006,NA12044,NA12057,NA12144,NA12155,NA12156,NA12234,NA12236,NA12249,NA12753,NA12761,NA12763,NA12813,NA12865,NA12875,NA18500,NA18501,NA18502,NA18504,NA18505,NA18506,NA18507,NA18508,NA18515,NA18516,NA18517,NA18521,NA18522,NA18523,NA18537,NA18545,NA18552,NA18555,NA18563,NA18566,NA18608,NA18623,NA18852,NA18854,NA18856,NA18857,NA18858,NA18859,NA18861,NA18862,NA18863,NA18870,NA18871,NA18872,NA18942,NA18961,NA18978,NA18994,NA18997,NA19007,NA19092,NA19093,NA19094,NA19098,NA19099,NA19100,NA19102,NA19103,NA19116,NA19119,NA19120,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19152,NA19154,NA19159,NA19161,NA19171,NA19172,NA19173,NA19192,NA19193,NA19194,NA19200,NA19202,NA19203,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19221,NA19222,NA19223,NA19239 dgv11e55 1 194997771 195168376 CNV loss Pinto_et_al_2007 17911159 SNP array esv35037,esv34607,esv34776,esv34299,esv34652,esv35048,esv34289,esv34753,esv34943 M 771 0 22 CFHR1,CFHR3,CFHR4 NA18503,NA18505,NA18526,NA18563,NA18611,NA18956,NA19003,NA19130,NA19131 dgv12e55 1 194997771 195278200 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750822,esv34978 M 771 5 0 CFHR1,CFHR2,CFHR3,CFHR4,CFHR5,F13B NA11840,SPC_165 dgv13e55 1 194999756 195168376 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750825,esv2750823,esv2750824 M 771 8 0 CFHR1,CFHR3,CFHR4 BEC_438,BEC_594,SPC_143 nsv437261 1 195002249 195010550 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467142 M 60 0 1 "" NA18503 nsv437262 1 195002249 195028740 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467143 M 60 0 1 CFHR3 NA18857 dgv513n100 1 195005234 195016446 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999287,nsv997390 M 29084 0 3 CFHR3 dgv514n100 1 195005234 195016472 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014067,nsv1015082 M 29084 8 104 CFHR3 dgv515n100 1 195005234 195024770 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999876,nsv1005922,nsv999733,nsv997258,nsv1007282,nsv999366,nsv1009427,nsv997325,nsv1008154,nsv1002368,nsv1005427 M 29084 0 28 CFHR3 dgv516n100 1 195005234 195028713 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009413,nsv1006461,nsv1008272,nsv1005465 M 29084 18 189 CFHR3 dgv517n100 1 195005234 195028713 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009611,nsv1004544,nsv998206,nsv1000511,nsv1004199,nsv1008409 M 29084 0 37 CFHR3 dgv518n100 1 195005234 195037748 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009510,nsv997477,nsv1002626,nsv1003804 M 29084 10 139 CFHR3 dgv519n100 1 195005234 195057654 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009364,nsv1008203,nsv1007966,nsv999051,nsv1006996,nsv997370,nsv1012887,nsv1011985,nsv1012141,nsv1002751 M 29084 50 156 CFHR1,CFHR3 dgv520n100 1 195005234 195057654 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001979,nsv1012087,nsv1008260,nsv1001524 M 29084 6 0 CFHR1,CFHR3 dgv521n100 1 195005234 195057654 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003405,nsv1008302,nsv1012747,nsv1004556,nsv1012514,nsv1012842,nsv1011148,nsv1008938,nsv1001714,nsv1000241,nsv1003658,nsv1007975,nsv1004514,nsv1001133,nsv1005899,nsv1005715,nsv1009631,nsv1003398,nsv1003843,nsv1002691,nsv1002254,nsv997657 M 29084 0 44 CFHR1,CFHR3 dgv522n100 1 195005234 195068613 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997909,nsv1012599,nsv1004620,nsv1013322,nsv1001887,nsv1000413,nsv1007293,nsv1003780,nsv1008499,nsv1008789,nsv1007935,nsv1012434,nsv1010202,nsv1011986,nsv1004226,nsv1000434,nsv1000099,nsv1004377 M 29084 0 26 CFHR1,CFHR3 dgv523n100 1 195005234 195068683 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007485,nsv1002676,nsv1008391,nsv1012299,nsv998781,nsv999843,nsv998305,nsv1012608,nsv1014555 M 29084 13 0 CFHR1,CFHR3 dgv524n100 1 195005234 195068683 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002470,nsv1014561,nsv1009598,nsv1008256,nsv1009300,nsv1001446,nsv999241,nsv1007945,nsv1009246,nsv1013755,nsv1002649,nsv1014257,nsv1011825 M 29084 324 549 CFHR1,CFHR3 dgv525n100 1 195005234 195090447 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997259,nsv1012516,nsv1003659,nsv1001182,nsv997871 M 29084 0 6 CFHR1,CFHR3 dgv526n100 1 195005234 195091211 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005391,nsv1002413,nsv1009352,nsv1003601,nsv1011529,nsv1003706,nsv1000998,nsv998950,nsv1000915 M 29084 517 243 CFHR1,CFHR3 dgv527n100 1 195005234 195124059 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013184,nsv1011536,nsv1004789,nsv1001107,nsv1003438,nsv998905,nsv1002639,nsv1013057,nsv1005616,nsv1009439 M 29084 14 0 CFHR1,CFHR3,CFHR4 dgv528n100 1 195005234 195176256 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009353,nsv1007147,nsv1009472,nsv1008807,nsv1007142,nsv1001821,nsv1011169,nsv1006569,nsv1009770,nsv1014247,nsv1010429,nsv1008849,nsv1005908,nsv997733,nsv1012118,nsv1001633,nsv1011807,nsv1009949,nsv1012773,nsv1011841,nsv1002063,nsv1003214,nsv1006349,nsv1006852,nsv1010288,nsv1013698,nsv1011814,nsv1007967,nsv1012525,nsv1006085 M 29084 0 47 CFHR1,CFHR3,CFHR4 dgv529n100 1 195005234 195176256 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001401,nsv1010586,nsv997977,nsv1002387 M 29084 9 28 CFHR1,CFHR3,CFHR4 dgv530n100 1 195005393 195037748 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007542,nsv1004699,nsv1009650,nsv1012849,nsv1007336,nsv1012108,nsv997371,nsv1002244,nsv998696 M 29084 0 15 CFHR3 nsv514031 1 195005520 195068320 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2855379,nssv2855154,nssv2855277,nssv2855252,nssv2855278,nssv2855218,nssv2855326,nssv2855170,nssv2855305,nssv2855175,nssv2855308,nssv2855210,nssv2855282,nssv2855231,nssv2855261,nssv2855197,nssv2855344,nssv2855229,nssv2855281,nssv2855181,nssv2855290,nssv2855220,nssv2855314,nssv2855191,nssv2855380,nssv2855245,nssv2855307,nssv2855222,nssv2855272,nssv2855174,nssv2855394,nssv2855232,nssv2855273,nssv2855153,nssv2855288,nssv2855172,nssv2855317,nssv2855237,nssv2855366,nssv2855162,nssv2855276,nssv2855214,nssv2855294,nssv2855199,nssv2855330,nssv2855250,nssv2855329,nssv2855194,nssv2855347,nssv2855243,nssv2855337,nssv2855157,nssv2855361,nssv2855249,nssv2855286,nssv2855223,nssv2855393,nssv2855173,nssv2855296,nssv2855183,nssv2855374,nssv2855247,nssv2855348,nssv2855244,nssv2855356,nssv2855211,nssv2855333,nssv2855164,nssv2855385,nssv2855236,nssv2855315,nssv2855176,nssv2855313,nssv2855171,nssv2855287,nssv2855230,nssv2855327,nssv2855195,nssv2855310,nssv2855234,nssv2855383,nssv2855190,nssv2855350,nssv2855235,nssv2855270,nssv2855147,nssv2855328,nssv2855152,nssv2855302,nssv2855180,nssv2855351,nssv2855228,nssv2855291,nssv2855151,nssv2855341,nssv2855158,nssv2855365,nssv2855200,nssv2855306,nssv2855202,nssv2855354,nssv2855238,nssv2855253,nssv2855207,nssv2855331,nssv2855240,nssv2855334,nssv2855163,nssv2855295,nssv2855155,nssv2855387,nssv2855221,nssv2855258,nssv2855179,nssv2855255,nssv2855192,nssv2855260,nssv2855165,nssv2855254,nssv2855203,nssv2855395,nssv2855186,nssv2855266,nssv2855213,nssv2855370,nssv2855242,nssv2855378,nssv2855160,nssv2855390,nssv2855251,nssv2855371,nssv2855187,nssv2855343,nssv2855227,nssv2855298,nssv2855208,nssv2855360,nssv2855189,nssv2855269,nssv2855167,nssv2855264,nssv2855219,nssv2855285,nssv2855215,nssv2855318,nssv2855248,nssv2855372,nssv2855233,nssv2855292,nssv2855226,nssv2855289,nssv2855182,nssv2855364,nssv2855150,nssv2855268,nssv2855184,nssv2855339,nssv2855206,nssv2855392,nssv2855178,nssv2855263,nssv2855188,nssv2855293,nssv2855246,nssv2855349,nssv2855196,nssv2855373,nssv2855201,nssv2855279,nssv2855241,nssv2855336,nssv2855185,nssv2855338,nssv2855166,nssv2855389,nssv2855161,nssv2855346,nssv2855159,nssv2855363,nssv2855216,nssv2855335,nssv2855225,nssv2855340,nssv2855205,nssv2855284,nssv2855217,nssv2855301,nssv2855212,nssv2855324,nssv2855177,nssv2855396,nssv2855198,nssv2855322,nssv2855168,nssv2855256,nssv2855193,nssv2855362,nssv2855169,nssv2855332,nssv2855239,nssv2855359,nssv2855148,nssv2855342,nssv2855204,nssv2855316,nssv2855224,nssv2855280,nssv2855156,nssv2855300,nssv2855209,nssv2855377,nssv2855149,nssv2855309,nssv2855352,nssv2855283,nssv2855369,nssv2855262,nssv2855257,nssv2855367,nssv2855376,nssv2855320,nssv2855368,nssv2855312,nssv2855299,nssv2855384,nssv2855375,nssv2855391,nssv2855265,nssv2855297,nssv2855274,nssv2855303,nssv2855388,nssv2855325,nssv2855267,nssv2855271,nssv2855259,nssv2855381,nssv2855357,nssv2855321,nssv2855353,nssv2855304,nssv2855319,nssv2855323,nssv2855275,nssv2855355,nssv2855311,nssv2855386,nssv2855382,nssv2855345,nssv2855358 M 2366 0 250 CFHR1,CFHR3 NA06984,NA06991,NA06993,NA06994,NA06995,NA07037,NA07056,NA07435,NA10830,NA10835,NA10837,NA10839,NA10840,NA10843,NA10846,NA10851,NA10857,NA10859,NA10860,NA11829,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11892,NA11917,NA11919,NA11920,NA11930,NA11993,NA12044,NA12144,NA12155,NA12156,NA12234,NA12236,NA12249,NA12272,NA12273,NA12283,NA12287,NA12329,NA12336,NA12340,NA12343,NA12375,NA12386,NA12399,NA12485,NA12748,NA12749,NA12753,NA12761,NA12763,NA12813,NA12828,NA12829,NA12875,NA12889,NA12890,NA18485,NA18487,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18537,NA18545,NA18552,NA18555,NA18563,NA18566,NA18608,NA18852,NA18854,NA18856,NA18857,NA18859,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18871,NA18872,NA18873,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18923,NA18924,NA18925,NA18930,NA18933,NA18935,NA18942,NA18961,NA18978,NA18994,NA18997,NA19007,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19102,NA19103,NA19107,NA19109,NA19114,NA19115,NA19116,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19152,NA19154,NA19159,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19179,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19192,NA19193,NA19194,NA19198,NA19200,NA19202,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19247,NA19248,NA19249,NA19256,NA19257,NA19258,NA21302,NA21303,NA21307,NA21310,NA21313,NA21316,NA21317,NA21362,NA21363,NA21381,NA21382,NA21383,NA21391,NA21400,NA21401,NA21404,NA21423,NA21425,NA21438,NA21439,NA21441,NA21442,NA21453,NA21454,NA21475,NA21479,NA21486,NA21489,NA21490,NA21494,NA21513,NA21522,NA21524,NA21600,NA21614,NA21615,NA21635,NA21636,NA21648 esv29961 1 195005520 195165287 CNV gain Wheeler_et_al_2008 18421352 Oligo aCGH,Sequencing essv84200 M 3 1 0 CFHR1,CFHR3,CFHR4 WATSON esv33169 1 195005549 195089556 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93432,essv100316,essv98346,essv101670,essv99385,essv101573,essv95851,essv96759,essv96901,essv100092,essv98311,essv100729,essv93838,essv98798,essv94055,essv96365,essv101073,essv93768,essv95648,essv97259,essv100574,essv96507,essv99280,essv92674,essv99733,essv97607,essv98944,essv94806 M 51 6 22 CFHR1,CFHR3 21603,21606,21616,21634,21656,21659,21693,21772,21791,21802,21817,21841,21909,21911,21938,21944,21972,22075,22086,22128,22217,22261,22275,22298,22300,22335,22352,22371 nsv1009172 1 195006583 195028713 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502622 M 29084 1 0 CFHR3 dgv531n100 1 195006583 195050237 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014773,nsv1002329,nsv1014572,nsv1008171,nsv1007616,nsv998280,nsv1000558,nsv997296 M 29084 0 20 CFHR3 dgv532n100 1 195006583 195083341 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007628,nsv1003055,nsv998045,nsv1001618,nsv1010015,nsv999665,nsv1002871 M 29084 25 0 CFHR1,CFHR3 nsv1008827 1 195007978 195105786 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502278 M 29084 0 1 CFHR1,CFHR3 dgv737n54 1 195010550 195037748 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548786,nsv548774,nsv548773 M 17421 0 5 CFHR3 dgv738n54 1 195010550 195045978 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548777,nsv548776,nsv548775 M 17421 0 3 CFHR3 dgv739n54 1 195010550 195070883 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548778,nsv548780,nsv548787,nsv548791,nsv548788,nsv548789,nsv548779,nsv548781 M 17421 0 11 CFHR1,CFHR3 dgv740n54 1 195010550 195089653 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548790,nsv548793,nsv548783,nsv548782 M 17421 0 6 CFHR1,CFHR3 dgv741n54 1 195010550 195114092 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548799,nsv548784 M 17421 0 2 CFHR1,CFHR3 nsv471352 1 195010553 195029495 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548051,nssv548050 M 3 2 0 CFHR3 JDW,YH nsv482141 1 195010553 195029495 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558502 M 1 1 0 CFHR3 KB1 nsv548785 1 195011511 195022923 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv733988 M 17421 0 1 CFHR3 nsv1006345 1 195014521 195028713 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494390,nssv3497598,nssv3487936 M 29084 1 2 CFHR3 dgv533n100 1 195014521 195037748 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998616,nsv998083,nsv1006949 M 29084 0 9 CFHR3 dgv742n54 1 195016368 195054565 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548796,nsv548792 M 17421 0 2 CFHR3 dgv743n54 1 195022923 195048233 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548795,nsv548794 M 17421 0 2 CFHR3 dgv744n54 1 195022923 195070883 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548798,nsv548797 M 17421 0 7 CFHR1,CFHR3 nsv946556 1 195023040 195028634 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811770,nssv1811812,nssv1811783,nssv1811798,nssv1811788,nssv1811859,nssv1811850,nssv1811802,nssv1811767,nssv1811797,nssv1811771,nssv1811813,nssv1811842,nssv1811818,nssv1811775,nssv1811794,nssv1811772,nssv1811807,nssv1811779,nssv1811817,nssv1811795,nssv1811791,nssv1811789,nssv1811858,nssv1811781,nssv1811829,nssv1811769,nssv1811803,nssv1811844,nssv1811809,nssv1811778,nssv1811822,nssv1811786,nssv1811805,nssv1811792,nssv1811825,nssv1811785,nssv1811830,nssv1811845,nssv1811815,nssv1811847,nssv1811764,nssv1811793,nssv1811810,nssv1811774,nssv1811826,nssv1811848,nssv1811835,nssv1811846,nssv1811816,nssv1811849,nssv1811796,nssv1811773,nssv1811827,nssv1811776,nssv1811787,nssv1811780,nssv1811860,nssv1811784,nssv1811856,nssv1811765,nssv1811834,nssv1811782,nssv1811828,nssv1811841,nssv1811790,nssv1811843,nssv1811837,nssv1811766,nssv1811820,nssv1811768,nssv1811839,nssv1811777,nssv1811799,nssv1811808,nssv1811804,nssv1811851,nssv1811819,nssv1811833,nssv1811800,nssv1811831,nssv1811824,nssv1811836,nssv1811823,nssv1811854,nssv1811814,nssv1811821,nssv1811811,nssv1811853,nssv1811855,nssv1811838,nssv1811852,nssv1811806,nssv1811857,nssv1811840,nssv1811801,nssv1811832 M 97 10 0 CFHR3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv534n100 1 195023633 195057654 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000163,nsv1004286,nsv1008878,nsv1010938,nsv1010373 M 29084 0 6 CFHR1,CFHR3 dgv535n100 1 195023633 195057654 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014474,nsv1009818,nsv1005078 M 29084 3 8 CFHR1,CFHR3 dgv536n100 1 195023633 195079141 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013426,nsv1014462 M 29084 17 2 CFHR1,CFHR3 dgv537n100 1 195023633 195083341 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011624,nsv1008514,nsv1009331,nsv1004252,nsv1011900,nsv1001883,nsv1003075,nsv1015111 M 29084 30 0 CFHR1,CFHR3 dgv538n100 1 195023752 195079141 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014129,nsv1011387,nsv1010716,nsv1000248,nsv1009530,nsv1012871 M 29084 0 12 CFHR1,CFHR3 dgv745n54 1 195028383 195092251 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548812,nsv548811,nsv548806,nsv548820,nsv548822,nsv548821,nsv548800 M 17421 0 8 CFHR1,CFHR3 nsv548801 1 195028383 195171073 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734012 M 17421 0 1 CFHR1,CFHR3,CFHR4 nsv946557 1 195028634 195046204 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811883,nssv1811910,nssv1811876,nssv1811884,nssv1811881,nssv1811896,nssv1811890,nssv1811909,nssv1811880,nssv1811898,nssv1811877,nssv1811895,nssv1811885,nssv1811888,nssv1811940,nssv1811894,nssv1811868,nssv1811914,nssv1811869,nssv1811900,nssv1811932,nssv1811912,nssv1811870,nssv1811891,nssv1811866,nssv1811906,nssv1811878,nssv1811926,nssv1811935,nssv1811915,nssv1811892,nssv1811919,nssv1811864,nssv1811904,nssv1811871,nssv1811923,nssv1811889,nssv1811927,nssv1811865,nssv1811903,nssv1811873,nssv1811897,nssv1811934,nssv1811913,nssv1811875,nssv1811918,nssv1811931,nssv1811917,nssv1811936,nssv1811899,nssv1811882,nssv1811893,nssv1811886,nssv1811902,nssv1811933,nssv1811922,nssv1811937,nssv1811924,nssv1811938,nssv1811907,nssv1811939,nssv1811887,nssv1811863,nssv1811929,nssv1811872,nssv1811905,nssv1811879,nssv1811861,nssv1811862,nssv1811928,nssv1811867,nssv1811921,nssv1811874,nssv1811930,nssv1811911,nssv1811916,nssv1811901,nssv1811925,nssv1811920,nssv1811908 M 97 10 0 CFHR3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv746n54 1 195029765 195070883 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548810,nsv548809,nsv548805,nsv548802 M 17421 0 7 CFHR1,CFHR3 nsv436766 1 195030452 195030968 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465869 M 2 1 0 "" NA18505 nsv548803 1 195030988 195057019 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734014 M 17421 1 0 CFHR1 nsv999866 1 195034023 195068683 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496701,nssv3501123,nssv3502687 M 29084 1 2 CFHR1 dgv539n100 1 195034023 195183410 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014982,nsv1003237,nsv1005384,nsv1005490,nsv1009646,nsv997545,nsv1009483,nsv1014288 M 29084 10 0 CFHR1,CFHR2,CFHR4 nsv548804 1 195034610 195045978 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734015,nssv734017,nssv734016 M 17421 0 3 "" nsv548807 1 195037161 195048233 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734021 M 17421 1 0 "" nsv548808 1 195037161 195057019 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734022 M 17421 0 1 CFHR1 nsv1003452 1 195037306 195057654 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486228 M 29084 0 1 CFHR1 nsv1010736 1 195037306 195068683 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490456 M 29084 1 0 CFHR1 dgv540n100 1 195037306 195168376 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004264,nsv1014690,nsv997383,nsv1013866 M 29084 9 11 CFHR1,CFHR4 dgv541n100 1 195037748 195149019 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007767,nsv1012345 M 29084 2 0 CFHR1,CFHR4 dgv747n54 1 195037748 195166713 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548814,nsv548813,nsv548824,nsv548817,nsv548823 M 17421 0 5 CFHR1,CFHR4 nsv548815 1 195040919 195064000 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734031 M 17421 0 1 CFHR1 dgv748n54 1 195040919 195199868 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548826,nsv548816 M 17421 2 0 CFHR1,CFHR2,CFHR4 dgv749n54 1 195044340 195070883 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548827,nsv548825,nsv548819,nsv548818 M 17421 0 5 CFHR1 dgv25n16 1 195044441 195177593 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436813,nsv436805 M 2 1 0 CFHR1,CFHR4 NA18505 nsv159564 1 195045815 195045815 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178142 M 24 "" esv3304833 1 195047534 195047535 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7764200,essv7767607 M 185 2 0 "" NA12874,NA18970 esv3347232 1 195047541 195047560 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597736 M 185 1 0 "" NA18970 nsv548828 1 195048233 195079893 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734045,nssv734046 M 17421 2 0 CFHR1 dgv3n31 1 195048720 195156968 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nsv471415,nsv471404 M 3 2 0 CFHR1,CFHR4 JDW,YH nsv498701 1 195049336 195171294 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585416 M 9 0 1 CFHR1,CFHR4 nsv1008077 1 195050237 195068683 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493482,nssv3485413 M 29084 2 0 CFHR1 dgv542n100 1 195050237 195083341 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999426,nsv1006494 M 29084 12 0 CFHR1 dgv543n100 1 195050237 195094466 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999920,nsv1006736 M 29084 0 2 CFHR1 nsv1013569 1 195050237 195114092 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494936 M 29084 0 1 CFHR1 dgv544n100 1 195050237 195176256 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010523,nsv1000067,nsv1007361,nsv1014797,nsv1011916,nsv1004428,nsv1001258,nsv1013427,nsv999320,nsv1009802,nsv999283,nsv997711,nsv1004826,nsv1003463,nsv1002474,nsv1007360,nsv1000639,nsv1006495,nsv1012853,nsv1011865,nsv1002250,nsv1002444,nsv1001033,nsv1014313,nsv997823,nsv1008012,nsv999666,nsv1014749,nsv1006575 M 29084 0 55 CFHR1,CFHR4 nsv437324 1 195054367 195062863 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467205 M 60 0 1 CFHR1 NA10851 nsv548829 1 195054367 195068235 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734047 M 17421 0 1 CFHR1 dgv750n54 1 195054367 195133856 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548830,nsv548833 M 17421 0 2 CFHR1,CFHR4 nsv471353 1 195055484 195067939 CNV gain+loss Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548054,nssv548053,nssv548052 M 3 2 1 CFHR1 JDW,NA18507,YH nsv482142 1 195055484 195067939 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558503 M 1 1 0 CFHR1 KB1 dgv545n100 1 195055597 195068683 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003157,nsv1000191,nsv1011375 M 29084 4 0 CFHR1 dgv546n100 1 195055597 195083341 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014810,nsv1006956,nsv1010347,nsv1000207 M 29084 6 0 CFHR1 dgv547n100 1 195055612 195083341 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014622,nsv998147 M 29084 0 2 CFHR1 dgv548n100 1 195056173 195068266 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999709,nsv1000933 M 29084 0 4 CFHR1 nsv1008777 1 195056173 195095561 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502233 M 29084 1 0 CFHR1 nsv946559 1 195056248 195091116 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811945,nssv1812399,nssv1812372,nssv1812376,nssv1812370,nssv1812403,nssv1812375,nssv1812398,nssv1812379,nssv1812384,nssv1812884,nssv1812396,nssv1812420,nssv1812408,nssv1811948,nssv1812395,nssv1812877,nssv1812391,nssv1811949,nssv1812402,nssv1812374,nssv1812388,nssv1811951,nssv1812389,nssv1812876,nssv1812416,nssv1811943,nssv1812401,nssv1811946,nssv1812404,nssv1812429,nssv1812415,nssv1812424,nssv1812405,nssv1812422,nssv1812412,nssv1812428,nssv1812419,nssv1812883,nssv1812373,nssv1812882,nssv1812410,nssv1811950,nssv1812407,nssv1811947,nssv1812413,nssv1812378,nssv1812418,nssv1812421,nssv1812392,nssv1812423,nssv1812390,nssv1811944,nssv1812397,nssv1812426,nssv1812394,nssv1812371,nssv1812385,nssv1812381,nssv1812406,nssv1812879,nssv1812377,nssv1812881,nssv1812411,nssv1811942,nssv1812409,nssv1812880,nssv1812393,nssv1812425,nssv1812383,nssv1812878,nssv1812387,nssv1812427,nssv1812417,nssv1812382,nssv1812414,nssv1811941,nssv1812400,nssv1812386,nssv1812380 M 97 10 0 CFHR1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv438126 1 195059091 195059832 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469652,nssv469763,nssv469641,nssv469630,nssv469618,nssv469607,nssv469774,nssv469741,nssv469663,nssv469596,nssv469685,nssv469696,nssv469752,nssv469707,nssv469718,nssv469729,nssv469585,nssv469674 M 269 0 18 CFHR1 NA18500,NA18502,NA18503,NA18505,NA18521,NA18523,NA18852,NA18854,NA18862,NA18863,NA19102,NA19103,NA19140,NA19142,NA19152,NA19154,NA19159,NA19161 nsv437335 1 195059832 195069130 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467216 M 60 0 1 CFHR1 NA12753 esv5113 1 195060951 195185070 CNV loss Wang_et_al_2008 18987735 Sequencing essv27554 M 1 0 1 CFHR1,CFHR2,CFHR4 YH nsv548831 1 195062646 195088545 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734049 M 17421 0 1 CFHR1 dgv751n54 1 195062646 195164017 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548834,nsv548832,nsv548835 M 17421 0 3 CFHR1,CFHR4 nsv469599 1 195063099 195221853 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1673725,nssv1674786,nssv1674043,nssv1674049,nssv1676063,nssv1672969,nssv1676094,nssv1674775,nssv1676589,nssv1672068,nssv1674658,nssv1675123 M 265 0 12 CFHR1,CFHR2,CFHR4,CFHR5 dgv549n100 1 195065176 195083341 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011846,nsv999209 M 29084 11 5 CFHR1 dgv550n100 1 195065176 195097935 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003994,nsv1004006,nsv1001487 M 29084 4 0 CFHR1 esv3890993 1 195066260 195168376 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25790795,essv25799398,essv25797057,essv25798645,essv25801486,essv25801013,essv25799408,essv25787874,essv25786112,essv25783110,essv25800980,essv25801004,essv25787965,essv25792622,essv25800373,essv25796484,essv25799752,essv25779823,essv25800364,essv25795986,essv25794509,essv25796786,essv25788194,essv25786739,essv25801341,essv25796908,essv25796949,essv25788678,essv25796281,essv25800782,essv25796008,essv25778626,essv25796005,essv25784135,essv25783464,essv25801499,essv25780275,essv25789895 M 3017 7 31 CFHR1,CFHR4 dgv551n100 1 195067948 195176256 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998286,nsv1014623,nsv1006234 M 29084 3 3 CFHR4 nsv1001657 1 195068266 195143742 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500997 M 29084 0 1 CFHR4 dgv752n54 1 195077621 195148967 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548836,nsv548845,nsv548840,nsv548844,nsv548853,nsv548862,nsv548858 M 17421 0 9 CFHR4 dgv753n54 1 195077621 195168376 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548846,nsv548839,nsv548838,nsv548837,nsv548841,nsv548854,nsv548856,nsv548855,nsv548861,nsv548859,nsv548857,nsv548863 M 17421 0 13 CFHR4 HGDP00894,HGDP01094 esv3891037 1 195077621 195199868 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789760 M 3017 1 0 CFHR2,CFHR4 dgv552n100 1 195079118 195162458 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009182,nsv1002646,nsv1000478,nsv1001420,nsv1010372,nsv1014124,nsv1003811,nsv1013383,nsv1013020,nsv1006818,nsv1014027,nsv1006643,nsv1009445,nsv1006488,nsv1011382 M 29084 0 47 CFHR4 dgv553n100 1 195079118 195176256 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013557,nsv1001860,nsv999068,nsv1001649,nsv1002597,nsv1006845,nsv1007136,nsv998359,nsv1011176,nsv999565 M 29084 14 128 CFHR4 dgv554n100 1 195079118 195183410 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998353,nsv999497,nsv1007936,nsv1003944 M 29084 0 4 CFHR2,CFHR4 dgv555n100 1 195083341 195190491 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010850,nsv1008576,nsv1002005,nsv1009250,nsv999813 M 29084 7 0 CFHR2,CFHR4 nsv1006432 1 195083341 195206330 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486942 M 29084 0 1 CFHR2,CFHR4 esv3891015 1 195087039 195133856 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25798791,essv25797755,essv25801512,essv25799390,essv25795594,essv25781464,essv25785913 M 3017 0 7 CFHR4 esv2421550 1 195087200 195168376 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5112437,essv5089723,essv5146518,essv5031936,essv5019383,essv5121031,essv5069719,essv5139763,essv5154797,essv5131800,essv5104759,essv5070649,essv5041413,essv5153192,essv5080009,essv5012300,essv5034344,essv5030819,essv5048469,essv5016553,essv5140047,essv5114871,essv5022129,essv5063849,essv5136955,essv5076533,essv5044896,essv5129728,essv5159074,essv5004947,essv5103147,essv5021513,essv5079056,essv5107632,essv5128782,essv5032833,essv5141110,essv5101852,essv5043455,essv5151218 M 1184 0 40 CFHR4 NA17965,NA17995,NA18124,NA18489,NA18503,NA18505,NA18526,NA18563,NA18597,NA18611,NA18634,NA18642,NA18745,NA18870,NA18872,NA18956,NA19038,NA19068,NA19130,NA19131,NA19149,NA19151,NA19213,NA19215,NA19256,NA19308,NA19428,NA19446,NA19456,NA19663,NA19665,NA19704,NA20340,NA20582,NA20876,NA20888,NA21094,NA21099,NA21123,NA21297 nsv826019 1 195089327 195158326 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1433460 M 31 0 1 CFHR4 NA18526 nsv470773 1 195089652 195163711 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544406,nssv544405,nssv544403,nssv544404 M 443 4 0 CFHR4 HGDP00457,HGDP00477,HGDP01217,HGDP01228 nsv470770 1 195089652 195186771 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544397,nssv544395,nssv544392,nssv544401,nssv544402,nssv544396,nssv544393,nssv544400,nssv544398,nssv544394 M 443 0 10 CFHR2,CFHR4 HGDP00451,HGDP00452,HGDP00455,HGDP00479,HGDP00928,HGDP01033,HGDP01081,HGDP01091,HGDP01094,HGDP01418 nsv467372 1 195089653 195092486 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542686 M 1557 0 1 "" HGDP01238 nsv548842 1 195089653 195092486 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174002 M 17421 0 1 "" HGDP01238 nsv467383 1 195089653 195133856 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542693 M 1557 0 1 CFHR4 HGDP00928 nsv548843 1 195089653 195133856 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734062,nssv1174003,nssv734061 M 17421 1 2 CFHR4 HGDP00928 dgv56n27 1 195089653 195163711 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467472,nsv467406,nsv467428,nsv467461,nsv467450,nsv467439,nsv467483,nsv467494,nsv467517,nsv467605,nsv467661 M 1557 11 0 CFHR4 HGDP00288,HGDP00392,HGDP00898,HGDP00977,HGDP01217,HGDP01228,HGDP01236,HGDP01242,HGDP01247,HGDP01349,NINDS_159 nsv818755 1 195089653 195163711 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417741 M 112 0 1 CFHR4 NA19003 dgv57n27 1 195089653 195186771 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467395,nsv467417,nsv467506,nsv467528,nsv467550,nsv467539,nsv467561,nsv467572,nsv467672,nsv467583,nsv467594,nsv467617,nsv467628,nsv467650,nsv467639,nsv467683,nsv467716,nsv467705,nsv467694,nsv467728,nsv467761,nsv467739,nsv467750,nsv467805,nsv467794,nsv467783,nsv467816,nsv467827,nsv467883,nsv467872 M 1557 0 30 CFHR2,CFHR4 1780854017_A,1780854391_A,1780854449_A,1780854535_A,1780862085_A,1780862379_A,1782681099_A,1782681176_A,1798860292_A,HGDP00218,HGDP00455,HGDP00479,HGDP00624,HGDP00741,HGDP00755,HGDP00756,HGDP00894,HGDP00952,HGDP00961,HGDP01033,HGDP01081,HGDP01094,HGDP01311,HGDP01367,NINDS_167,NINDS_173,NINDS_186,NINDS_245,NINDS_259,NINDS_92 dgv754n54 1 195089653 195186771 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548847,nsv548848,nsv548849,nsv548850 M 17421 25 18 CFHR2,CFHR4 HGDP00392,HGDP00455,HGDP00898,HGDP01053,HGDP01084,HGDP01085,HGDP01217,HGDP01228,HGDP01236,HGDP01242,HGDP01247,HGDP01349,NINDS_159,NINDS_167,NINDS_173,NINDS_186,NINDS_235,NINDS_245,NINDS_259,NINDS_92 dgv58n27 1 195089653 195199868 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467772,nsv467839,nsv467850 M 1557 3 0 CFHR2,CFHR4 HGDP00457,HGDP01041,NINDS_235 nsv548851 1 195089653 195199868 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174024,nssv1174025 M 17421 2 0 CFHR2,CFHR4 HGDP00457,HGDP01042 nsv548852 1 195089653 195204159 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734089 M 17421 0 1 CFHR2,CFHR4 nsv1000717 1 195089928 195133092 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485054 M 29084 0 1 CFHR4 nsv442558 1 195089940 195168372 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1619356,nssv1619347,nssv1619352,nssv1619351,nssv1619354,nssv1619358,nssv1619348,nssv1619359,nssv1619353,nssv1619355,nssv1619350,nssv1619357,nssv1619349 M 270 2 11 CFHR4 NA10854,NA11840,NA18503,NA18505,NA18526,NA18563,NA18611,NA18870,NA18872,NA18956,NA19003,NA19130,NA19131 esv34855 1 195089966 195153393 CNV loss Pinto_et_al_2007 17911159 SNP array essv6979964,essv6979965,essv6988279 M 771 0 3 CFHR4 NA18870 nsv514032 1 195091760 195162688 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2855402,nssv2855405,nssv2855399,nssv2855407,nssv2855397,nssv2855408,nssv2855400,nssv2855404,nssv2855401,nssv2855403,nssv2855398,nssv2855406,nssv2855409 M 2366 0 13 CFHR4 NA18489,NA18503,NA18563,NA18611,NA18870,NA18872,NA18956,NA19003,NA19130,NA19131,NA19149,NA19151,NA19256 nsv467861 1 195092251 195104683 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543002 M 1557 0 1 "" HGDP01418 nsv548860 1 195092251 195104683 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174026 M 17421 0 1 "" HGDP01418 nsv548864 1 195097636 195109794 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734100 M 17421 0 1 "" nsv1013679 1 195101729 195152308 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495088 M 29084 0 1 CFHR4 nsv548865 1 195104683 195163711 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734101 M 17421 0 1 CFHR4 dgv556n100 1 195108894 195120130 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007644,nsv1009405 M 29084 0 4 "" nsv1003503 1 195108894 195149019 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486276 M 29084 1 0 CFHR4 dgv557n100 1 195109794 195128891 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013541,nsv1004621 M 29084 0 2 CFHR4 dgv755n54 1 195119404 195160949 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548866,nsv548868 M 17421 0 2 CFHR4 HGDP00951 nsv467905 1 195119404 195160949 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543042 M 1557 0 1 CFHR4 HGDP00951 dgv756n54 1 195119956 195147350 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548867,nsv548869 M 17421 0 2 CFHR4 nsv1009809 1 195120130 195168376 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489489 M 29084 0 1 CFHR4 esv1620517 1 195121251 195121251 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4300650 M 2 1 0 "" HuRef nsv471354 1 195123835 195154385 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548057,nssv548055 M 3 2 0 CFHR4 JDW,YH nsv946560 1 195140520 195141020 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1812436,nssv1812464,nssv1812455,nssv1812493,nssv1812438,nssv1812496,nssv1812452,nssv1812463,nssv1812449,nssv1812500,nssv1812435,nssv1812457,nssv1812432,nssv1812526,nssv1812437,nssv1812486,nssv1812454,nssv1812497,nssv1812443,nssv1812501,nssv1812512,nssv1812478,nssv1812509,nssv1812480,nssv1812511,nssv1812465,nssv1812447,nssv1812453,nssv1812448,nssv1812456,nssv1812507,nssv1812430,nssv1812433,nssv1812483,nssv1812458,nssv1812479,nssv1812510,nssv1812468,nssv1812434,nssv1812492,nssv1812445,nssv1812495,nssv1812441,nssv1812476,nssv1812508,nssv1812503,nssv1812513,nssv1812517,nssv1812439,nssv1812502,nssv1812444,nssv1812488,nssv1812459,nssv1812520,nssv1812440,nssv1812482,nssv1812461,nssv1812481,nssv1812451,nssv1812469,nssv1812516,nssv1812473,nssv1812515,nssv1812471,nssv1812442,nssv1812475,nssv1812514,nssv1812504,nssv1812446,nssv1812525,nssv1812431,nssv1812466,nssv1812450,nssv1812494,nssv1812522,nssv1812519,nssv1812521,nssv1812499,nssv1812506,nssv1812490,nssv1812485,nssv1812467,nssv1812484,nssv1812505,nssv1812470,nssv1812487,nssv1812474,nssv1812460,nssv1812477,nssv1812518,nssv1812523,nssv1812498,nssv1812524,nssv1812472,nssv1812489,nssv1812462,nssv1812491 M 97 10 0 CFHR4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946561 1 195142482 195143368 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813530,nssv1813500,nssv1812531,nssv1813543,nssv1812549,nssv1813512,nssv1812539,nssv1812557,nssv1812552,nssv1812563,nssv1812538,nssv1813521,nssv1812551,nssv1813519,nssv1812535,nssv1813508,nssv1812544,nssv1813502,nssv1812534,nssv1813501,nssv1812545,nssv1813493,nssv1813529,nssv1812550,nssv1812540,nssv1813540,nssv1812533,nssv1813545,nssv1812532,nssv1813514,nssv1812555,nssv1812562,nssv1813528,nssv1813510,nssv1812537,nssv1812564,nssv1812541,nssv1812553,nssv1813536,nssv1812554,nssv1812556,nssv1812561,nssv1813531,nssv1813492,nssv1812542,nssv1813522,nssv1812529,nssv1812560,nssv1813532,nssv1813515,nssv1812530,nssv1812527,nssv1812548,nssv1813505,nssv1813535,nssv1813497,nssv1812546,nssv1813504,nssv1812536,nssv1813499,nssv1812543,nssv1813526,nssv1812528,nssv1813546,nssv1812558,nssv1812567,nssv1813537,nssv1812565,nssv1813534,nssv1813518,nssv1813533,nssv1813503,nssv1812547,nssv1813511,nssv1813517,nssv1813496,nssv1813520,nssv1812566,nssv1813538,nssv1813523,nssv1813495,nssv1813498,nssv1813494,nssv1813525,nssv1813541,nssv1813516,nssv1812559,nssv1813509,nssv1813507,nssv1813542,nssv1813506,nssv1813544,nssv1813513,nssv1813547,nssv1813539,nssv1813527,nssv1813524 M 97 10 0 CFHR4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946562 1 195147586 195151019 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813552,nssv1813643,nssv1813579,nssv1813644,nssv1813567,nssv1813639,nssv1813570,nssv1813624,nssv1813554,nssv1813599,nssv1813557,nssv1813616,nssv1813625,nssv1813642,nssv1813555,nssv1813636,nssv1813556,nssv1813637,nssv1813562,nssv1813615,nssv1813626,nssv1813590,nssv1813551,nssv1813605,nssv1813569,nssv1813607,nssv1813573,nssv1813640,nssv1813563,nssv1813594,nssv1813560,nssv1813578,nssv1813572,nssv1813589,nssv1813566,nssv1813611,nssv1813565,nssv1813598,nssv1813632,nssv1813586,nssv1813553,nssv1813585,nssv1813629,nssv1813612,nssv1813627,nssv1813571,nssv1813558,nssv1813609,nssv1813561,nssv1813618,nssv1813576,nssv1813575,nssv1813568,nssv1813602,nssv1813559,nssv1813588,nssv1813633,nssv1813584,nssv1813628,nssv1813596,nssv1813634,nssv1813583,nssv1813577,nssv1813580,nssv1813564,nssv1813623,nssv1813630,nssv1813601,nssv1813631,nssv1813574,nssv1813549,nssv1813597,nssv1813550,nssv1813595,nssv1813619,nssv1813581,nssv1813608,nssv1813620,nssv1813593,nssv1813641,nssv1813638,nssv1813548,nssv1813614,nssv1813592,nssv1813591,nssv1813600,nssv1813613,nssv1813635,nssv1813617,nssv1813606,nssv1813622,nssv1813604,nssv1813610,nssv1813603,nssv1813621,nssv1813582,nssv1813587 M 97 10 0 CFHR4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946563 1 195153583 195184831 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813655,nssv1813677,nssv1813647,nssv1813707,nssv1813656,nssv1813684,nssv1813649,nssv1813712,nssv1813723,nssv1813709,nssv1813664,nssv1813699,nssv1813658,nssv1813702,nssv1813667,nssv1813713,nssv1813674,nssv1813687,nssv1813653,nssv1813696,nssv1813659,nssv1813708,nssv1813676,nssv1813695,nssv1813722,nssv1813704,nssv1813661,nssv1813686,nssv1813657,nssv1813691,nssv1813669,nssv1813675,nssv1813670,nssv1813672,nssv1813663,nssv1813681,nssv1813660,nssv1813693,nssv1813662,nssv1813682,nssv1813666,nssv1813706,nssv1813650,nssv1813683,nssv1813652,nssv1813668,nssv1813651,nssv1813680,nssv1813673,nssv1813671,nssv1813724,nssv1813698,nssv1813648,nssv1813705,nssv1813716,nssv1813694,nssv1813718,nssv1813697,nssv1813654,nssv1813692,nssv1813719,nssv1813700,nssv1813720,nssv1813679,nssv1813717,nssv1813689,nssv1813715,nssv1813645,nssv1813665,nssv1813690,nssv1813721,nssv1813688,nssv1813646,nssv1813685,nssv1813703,nssv1813714,nssv1813678,nssv1813701,nssv1813711,nssv1813710 M 97 10 0 CFHR2,CFHR4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv826031 1 195158326 195165428 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1429600 M 31 1 0 "" AK14 nsv826042 1 195158326 195185574 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426431 M 31 1 0 CFHR2 AK6 nsv548870 1 195168840 195178814 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734105 M 17421 0 1 "" esv3891048 1 195207141 195213398 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25786750 M 3017 0 1 CFHR5 nsv524689 1 195208116 195213398 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700661 M 2026 0 1 CFHR5 nsv8702 1 195210475 195221198 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23703 M 31 0 1 CFHR5 NA19132 esv1543078 1 195278494 195278494 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4112289 M 2 1 0 F13B HuRef esv7629 1 195296628 195296824 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30070 M 1 0 0 F13B nsv946564 1 195333457 195336461 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813727,nssv1813758,nssv1814811,nssv1813798,nssv1813735,nssv1811147,nssv1813731,nssv1813775,nssv1814814,nssv1813790,nssv1813729,nssv1813770,nssv1813736,nssv1811145,nssv1814809,nssv1813769,nssv1813744,nssv1813780,nssv1813738,nssv1813768,nssv1813747,nssv1811150,nssv1813737,nssv1813799,nssv1813746,nssv1813757,nssv1813739,nssv1811143,nssv1813733,nssv1811149,nssv1813749,nssv1811144,nssv1813750,nssv1813782,nssv1813740,nssv1811148,nssv1813756,nssv1813793,nssv1813754,nssv1813764,nssv1813743,nssv1811142,nssv1813742,nssv1813776,nssv1813730,nssv1813792,nssv1814812,nssv1814807,nssv1814815,nssv1813788,nssv1813732,nssv1813767,nssv1811139,nssv1813789,nssv1813753,nssv1811146,nssv1814810,nssv1813759,nssv1813734,nssv1813755,nssv1814808,nssv1813766,nssv1811140,nssv1813784,nssv1813741,nssv1813748,nssv1813745,nssv1813779,nssv1813728,nssv1813786,nssv1814813,nssv1813752,nssv1813726,nssv1813787,nssv1813762,nssv1813761,nssv1813771,nssv1813751,nssv1813778,nssv1813773,nssv1813763,nssv1813791,nssv1814806,nssv1813774,nssv1813785,nssv1813781,nssv1813795,nssv1813796,nssv1813783,nssv1813777,nssv1813794,nssv1813760,nssv1813765,nssv1811141,nssv1813725,nssv1813772,nssv1813797 M 97 10 0 ASPM HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946565 1 195369414 195374856 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605115,nssv1811238,nssv2605099,nssv1811241,nssv2605121,nssv2605155,nssv2605098,nssv2605116,nssv1811158,nssv1811243,nssv1811175,nssv2605139,nssv1811160,nssv1811198,nssv2605091,nssv1811193,nssv1811233,nssv1811247,nssv1811170,nssv1811185,nssv2605163,nssv1811227,nssv2605106,nssv1811186,nssv1811166,nssv1811218,nssv1811228,nssv2605149,nssv1811180,nssv2605133,nssv1811159,nssv1811184,nssv2605101,nssv1811208,nssv1811236,nssv1811210,nssv1811153,nssv2605129,nssv2605104,nssv1811151,nssv2605093,nssv2605137,nssv2605164,nssv1811244,nssv1811232,nssv1811242,nssv1811168,nssv2605140,nssv1811165,nssv1811225,nssv1811156,nssv2605132,nssv2605114,nssv1811215,nssv2605103,nssv1811220,nssv2605097,nssv1811189,nssv2605102,nssv2605128,nssv2605096,nssv1811239,nssv2605166,nssv1811246,nssv1811155,nssv2605159,nssv1811231,nssv1811197,nssv2605105,nssv1811240,nssv2605107,nssv1811219,nssv2605111,nssv1811224,nssv1811161,nssv1811194,nssv1811172,nssv2605138,nssv1811179,nssv2605123,nssv1811235,nssv2605157,nssv1811229,nssv1811200,nssv1811234,nssv2605113,nssv1811182,nssv1811192,nssv1811162,nssv2605130,nssv1811154,nssv2605145,nssv2605112,nssv2605124,nssv1811163,nssv1811199,nssv1811157,nssv2605127,nssv2605108,nssv2605147,nssv2605118,nssv1811223,nssv2605119,nssv2605146,nssv2605161,nssv2605143,nssv1811171,nssv1811212,nssv2605092,nssv2605148,nssv2605100,nssv2605122,nssv2605109,nssv2605120,nssv1811164,nssv1811209,nssv1811237,nssv2605156,nssv1811176,nssv1811202,nssv2605095,nssv1811222,nssv2605167,nssv2605126,nssv1811169,nssv1811213,nssv1811167,nssv1811203,nssv2605162,nssv1811211,nssv2605169,nssv1811183,nssv1811152,nssv2605131,nssv2605168,nssv1811226,nssv2605160,nssv1811196,nssv2605165,nssv1811178,nssv1811173,nssv1811245,nssv2605094,nssv2605150,nssv1811230,nssv2605144,nssv2605110,nssv1811190,nssv2605134,nssv1811204,nssv2605153,nssv2605142,nssv1811216,nssv2605154,nssv1811191,nssv1811201,nssv1811214,nssv1811195,nssv1811177,nssv2605090,nssv2605136,nssv1811205,nssv2605151,nssv2605117,nssv1811217,nssv2605135,nssv2605152,nssv1811188,nssv1811207,nssv1811187,nssv1811174,nssv1811221,nssv1811181,nssv2605125,nssv2605141,nssv2605158,nssv1811206 M 97 10 0 ASPM HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548871 1 195373227 195434856 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734106 M 17421 0 1 ASPM,ZBTB41 nsv826053 1 195381792 195382339 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431859 M 31 0 1 ASPM AK20 esv2445525 1 195433805 195435207 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5377618 M 1 0 1 ZBTB41 NA18507 nsv477752 1 195627250 195627250 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012865 M 9 1 0 CRB1 NA18517 nsv521647 1 195731071 195795841 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698265 M 2026 1 0 DENND1B nsv4010 1 195738086 195778020 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2654 M 9 0 1 DENND1B NA18555 esv992847 1 195766412 195770880 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564989 M 3 0 1 DENND1B HuRef esv2558030 1 195766467 195770740 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5222752 M 1 0 1 DENND1B NA18507 esv7266 1 195766887 195770144 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29707 M 1 0 0 DENND1B esv2053199 1 195766952 195770081 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4543669 M 1 0 1 DENND1B NA18507 nsv511726 1 195767029 195770248 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626370 M 1 0 1 DENND1B 1 esv4662 1 195767107 195769966 CNV loss Wang_et_al_2008 18987735 Sequencing essv27103 M 1 0 1 DENND1B YH nsv498702 1 195767131 195769907 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585417 M 9 0 1 DENND1B esv987539 1 195767138 195769900 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566642 M 3 0 1 DENND1B HuRef esv1218085 1 195767143 195769906 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3914047 M 2 0 1 DENND1B HuRef esv1029151 1 195780689 195780689 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3694412 M 2 1 0 DENND1B HuRef nsv548872 1 195795841 195911204 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734107 M 17421 0 1 DENND1B nsv437263 1 195865653 195988863 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467144 M 60 0 1 DENND1B NA19221 nsv946566 1 195925683 195928351 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811252,nssv1811278,nssv1811263,nssv1811283,nssv1811277,nssv1811952,nssv1811272,nssv1811953,nssv1811251,nssv1811321,nssv1811267,nssv1811292,nssv1811257,nssv1811298,nssv1811330,nssv1811956,nssv1811256,nssv1811959,nssv1811250,nssv1811318,nssv1811333,nssv1811288,nssv1811326,nssv1811285,nssv1811262,nssv1811305,nssv1811265,nssv1811307,nssv1811253,nssv1811290,nssv1811258,nssv1811281,nssv1811325,nssv1811315,nssv1811328,nssv1811335,nssv1811276,nssv1811309,nssv1811269,nssv1811286,nssv1811255,nssv1811312,nssv1811332,nssv1811317,nssv1811331,nssv1811295,nssv1811329,nssv1811322,nssv1811279,nssv1811958,nssv1811327,nssv1811316,nssv1811261,nssv1811297,nssv1811334,nssv1811324,nssv1811264,nssv1811291,nssv1811259,nssv1811282,nssv1811266,nssv1811296,nssv1811268,nssv1811248,nssv1811260,nssv1811289,nssv1811249,nssv1811301,nssv1811270,nssv1811280,nssv1811254,nssv1811960,nssv1811273,nssv1811319,nssv1811299,nssv1811284,nssv1811308,nssv1811293,nssv1811320,nssv1811306,nssv1811300,nssv1811303,nssv1811313,nssv1811311,nssv1811287,nssv1811954,nssv1811957,nssv1811323,nssv1811314,nssv1811274,nssv1811294,nssv1811275,nssv1811302,nssv1811271,nssv1811310,nssv1811955,nssv1811304 M 97 10 0 DENND1B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv548873 1 195931528 195960660 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734108 M 17421 0 1 DENND1B esv3334717 1 195932839 195932853 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863800 M 185 1 0 DENND1B NA12005 esv1439856 1 195949658 195949658 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3981835 M 2 1 0 DENND1B HuRef nsv946567 1 195971434 195972024 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811965,nssv1812053,nssv1811967,nssv1812011,nssv1812038,nssv1812014,nssv1811973,nssv1812012,nssv1811980,nssv1812052,nssv1811990,nssv1811997,nssv1811968,nssv1812005,nssv1811985,nssv1812001,nssv1811969,nssv1812051,nssv1812039,nssv1811991,nssv1811972,nssv1812016,nssv1811970,nssv1812003,nssv1811966,nssv1812008,nssv1811978,nssv1812020,nssv1811971,nssv1812037,nssv1811976,nssv1812050,nssv1811992,nssv1812025,nssv1812040,nssv1812029,nssv1811975,nssv1812018,nssv1812041,nssv1811998,nssv1811989,nssv1812035,nssv1811963,nssv1811995,nssv1812042,nssv1812049,nssv1811964,nssv1812033,nssv1812045,nssv1812056,nssv1811982,nssv1812054,nssv1812043,nssv1812004,nssv1812044,nssv1812009,nssv1811986,nssv1812055,nssv1811979,nssv1812010,nssv1811974,nssv1811994,nssv1812047,nssv1811996,nssv1811983,nssv1811988,nssv1811977,nssv1812000,nssv1811981,nssv1812007,nssv1811962,nssv1812032,nssv1812046,nssv1812026,nssv1812019,nssv1811987,nssv1811961,nssv1811993,nssv1811999,nssv1812002,nssv1812006,nssv1812031,nssv1812027,nssv1812013,nssv1812024,nssv1812015,nssv1812057,nssv1812017,nssv1811984,nssv1812034,nssv1812036,nssv1812023,nssv1812028,nssv1812048,nssv1812022,nssv1812030,nssv1812021 M 97 10 0 DENND1B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522400 1 195993921 195999678 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695180 M 2026 0 1 DENND1B esv1007074 1 196014660 196035436 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563607 M 3 0 0 "" HuRef esv3330548 1 196022180 196023747 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808941 M 185 0 0 "" NA12878 esv3300 1 196023411 196024627 OTHER inversion Wang_et_al_2008 18987735 Sequencing essv25741 M 1 0 0 "" YH esv1093552 1 196023846 196024607 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3657971 M 2 0 0 "" HuRef esv3379171 1 196024362 196025499 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808942 M 185 0 0 "" NA12878 nsv1009697 1 196070917 196091660 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487510 M 29084 0 1 "" dgv558n100 1 196088392 196159426 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999662,nsv1004130 M 29084 2 0 C1orf53,LHX9 esv2762214 1 196088392 196164119 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006926 M 1109 1 0 C1orf53,LHX9 RW_0346 nsv506971 1 196154392 196160392 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619257,nssv617545 M 4 0 0 LHX9 CHM,NA10860 esv2520814 1 196160244 196161710 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5184269 M 1 0 1 LHX9 NA18507 esv1002483 1 196160273 196161167 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565223 M 3 0 1 LHX9 HuRef esv2143475 1 196160464 196161105 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4654974 M 1 0 1 LHX9 NA18507 esv8658 1 196160537 196161016 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31099 M 1 0 0 LHX9 esv3513 1 196160583 196161019 CNV loss Wang_et_al_2008 18987735 Sequencing essv25954 M 1 0 1 LHX9 YH nsv1011794 1 196291231 196426716 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705490 M 29084 1 0 NEK7 nsv512753 1 196319014 196319060 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625382 M 1 1 0 "" 1 esv3305346 1 196385401 196385402 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7752641 M 185 0 0 "" esv3406044 1 196385403 196385537 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902613,essv8902617,essv8902616,essv8902615 M 185 4 0 "" NA12003,NA18501,NA18520,NA18942 nsv832248 1 196414499 196594390 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441609,nssv1441608 M 95 1 1 NEK7 nsv946568 1 196433099 196433940 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1812137,nssv1812145,nssv1812080,nssv1812125,nssv1812135,nssv1812148,nssv1812064,nssv1812058,nssv1812077,nssv1812115,nssv1812136,nssv1812117,nssv1812082,nssv1812118,nssv1812067,nssv1812113,nssv1812066,nssv1812150,nssv1812065,nssv1812134,nssv1812144,nssv1812105,nssv1812089,nssv1812147,nssv1812063,nssv1812126,nssv1812075,nssv1812132,nssv1812076,nssv1812098,nssv1812070,nssv1812119,nssv1812073,nssv1812122,nssv1812062,nssv1812149,nssv1812086,nssv1812102,nssv1812139,nssv1812108,nssv1812138,nssv1812146,nssv1812072,nssv1812100,nssv1812069,nssv1812151,nssv1812071,nssv1812127,nssv1812143,nssv1812153,nssv1812060,nssv1812095,nssv1812140,nssv1812106,nssv1812141,nssv1812152,nssv1812068,nssv1812107,nssv1812087,nssv1812092,nssv1812079,nssv1812094,nssv1812142,nssv1812091,nssv1812061,nssv1812129,nssv1812083,nssv1812088,nssv1812074,nssv1812111,nssv1812059,nssv1812104,nssv1812078,nssv1812085,nssv1812084,nssv1812109,nssv1812131,nssv1812093,nssv1812097,nssv1812154,nssv1812121,nssv1812116,nssv1812124,nssv1812123,nssv1812099,nssv1812110,nssv1812101,nssv1812114,nssv1812090,nssv1812112,nssv1812128,nssv1812133,nssv1812096,nssv1812120,nssv1812130,nssv1812103,nssv1812081 M 97 10 0 NEK7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1005959 1 196446201 196551413 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501937 M 29084 1 0 NEK7 esv3328419 1 196479701 196479749 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902619,essv8902618 M 185 2 0 NEK7 NA18870,NA19116 esv3305151 1 196479702 196479703 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7756226,essv7760329 M 185 2 0 NEK7 NA18870,NA19116 esv3304305 1 196509914 196509915 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7833559,essv7811974,essv7801720,essv7820851,essv7773838,essv7817593,essv7824557,essv7790016,essv7785156,essv7771674,essv7803123,essv7784661,essv7791307,essv7813543,essv7814365,essv7806865,essv7832274,essv7806376,essv7796548,essv7791836,essv7805505,essv7808570,essv7825293,essv7826148,essv7816312,essv7789548,essv7825561,essv7804436,essv7799906,essv7793243,essv7798743,essv7808694,essv7834688,essv7800833,essv7777045,essv7774716,essv7786307,essv7836444,essv7781347,essv7783071,essv7775247,essv7826344,essv7802114,essv7826552,essv7818606 M 185 45 0 NEK7 NA07037,NA07051,NA07347,NA11830,NA11931,NA11995,NA12287,NA12750,NA12763,NA12874,NA12878,NA12892,NA18489,NA18498,NA18501,NA18502,NA18504,NA18507,NA18508,NA18510,NA18511,NA18517,NA18519,NA18520,NA18537,NA18558,NA18573,NA18576,NA18593,NA18638,NA18858,NA18861,NA18916,NA18965,NA18970,NA18980,NA19093,NA19108,NA19116,NA19129,NA19138,NA19147,NA19172,NA19210,NA19239 esv3309071 1 196509916 196509917 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843214,essv7839782,essv7841351 M 185 3 0 NEK7 NA12878,NA12892,NA19239 esv2564043 1 196535106 196536712 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5248183 M 1 0 1 NEK7 NA18507 nsv548874 1 196567378 196575843 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734109 M 17421 0 1 "" nsv4021 1 196569006 196582349 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10427 M 9 0 1 "" NA18956 nsv947462 1 196570125 196576830 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2757168,nssv2765643,nssv2764201 M 97 0 3 "" HGDP00542,HGDP00927,HGDP01307 esv8371 1 196571017 196577117 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30812 M 1 0 0 "" nsv160045 1 196571404 196571404 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178623 M 24 "" esv26607 1 196571757 196577159 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12650 M 40 0 4 "" NA12414,NA18907,NA18916,NA19257 dgv757n54 1 196571795 196575459 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548890,nsv548875,nsv548876 M 17421 0 3 "" dgv758n54 1 196571795 196576916 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548886,nsv548883,nsv548885,nsv548882,nsv548881,nsv548889,nsv548888,nsv548880,nsv548887,nsv548893,nsv548879,nsv548891,nsv548892,nsv548878,nsv548877 M 17421 0 122 "" nsv548884 1 196571795 196578583 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734209 M 17421 0 1 "" dgv93n67 1 196571808 196576816 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826086,nsv826064,nsv826097,nsv826075 M 31 0 15 "" AK10,AK12,AK16,AK18,AK20,AK8,NA18537,NA18547,NA18582,NA18947,NA18951,NA18969,NA18972,NA18997,NA18999 nsv514033 1 196572000 196576752 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2855414,nssv2855462,nssv2855416,nssv2855442,nssv2855421,nssv2855463,nssv2855419,nssv2855482,nssv2855413,nssv2855467,nssv2855423,nssv2855476,nssv2855427,nssv2855437,nssv2855429,nssv2855465,nssv2855426,nssv2855441,nssv2855415,nssv2855455,nssv2855418,nssv2855483,nssv2855431,nssv2855460,nssv2855434,nssv2855481,nssv2855424,nssv2855454,nssv2855417,nssv2855469,nssv2855433,nssv2855450,nssv2855432,nssv2855449,nssv2855410,nssv2855457,nssv2855428,nssv2855445,nssv2855420,nssv2855464,nssv2855435,nssv2855472,nssv2855422,nssv2855456,nssv2855412,nssv2855439,nssv2855425,nssv2855448,nssv2855430,nssv2855473,nssv2855411,nssv2855466,nssv2855443,nssv2855459,nssv2855451,nssv2855468,nssv2855474,nssv2855436,nssv2855453,nssv2855484,nssv2855475,nssv2855477,nssv2855452,nssv2855446,nssv2855438,nssv2855458,nssv2855480,nssv2855471,nssv2855461,nssv2855485,nssv2855478,nssv2855444,nssv2855440,nssv2855470,nssv2855447,nssv2855479 M 2366 0 76 "" NA07051,NA10859,NA11840,NA11882,NA12045,NA12273,NA12386,NA12400,NA12414,NA12485,NA18485,NA18487,NA18489,NA18501,NA18524,NA18532,NA18537,NA18547,NA18555,NA18582,NA18593,NA18622,NA18636,NA18867,NA18871,NA18872,NA18907,NA18916,NA18923,NA18925,NA18947,NA18948,NA18952,NA18953,NA18956,NA18960,NA18966,NA18969,NA18970,NA18971,NA18974,NA18975,NA18978,NA18981,NA18990,NA18992,NA18997,NA18998,NA18999,NA19000,NA19012,NA19096,NA19102,NA19103,NA19118,NA19137,NA19153,NA19159,NA19160,NA19161,NA19171,NA19174,NA19184,NA19185,NA19186,NA19206,NA19207,NA19208,NA19257,NA19258,NA21381,NA21391,NA21404,NA21486,NA21487,NA21717 dgv759n54 1 196572878 196575843 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548895,nsv548894 M 17421 0 2 "" dgv760n54 1 196572878 196576916 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548897,nsv548899,nsv548898,nsv548896,nsv548901,nsv548900 M 17421 0 11 "" nsv548902 1 196574351 196576823 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734249 M 17421 0 1 "" esv2611839 1 196632853 196633573 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5179731 M 1 1 0 "" NA18507 esv3431589 1 196633150 196633498 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652059 M 185 1 0 "" NA19240 nsv512754 1 196634054 196634277 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625383 M 1 1 0 "" 1 nsv832259 1 196656854 196796820 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441611,nssv1441610 M 95 2 0 ATP6V1G3 nsv4032 1 196683535 196718597 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv425 M 9 1 0 "" NA19240 nsv470774 1 196687281 196755113 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544407 M 443 0 1 "" HGDP00472 nsv471912 1 196707400 196707400 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011562 M 9 1 0 "" NA18555 nsv479674 1 196708045 196708045 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013087 M 9 0 0 "" nsv479898 1 196709683 196709683 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018278 M 9 0 0 "" nsv509579 1 196728089 196728089 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621108 M 4 1 0 "" NA15510 esv2252929 1 196728209 196728678 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4515942 M 1 0 1 "" NA18507 esv4854 1 196728376 196728659 CNV loss Wang_et_al_2008 18987735 Sequencing essv27295 M 1 0 1 "" YH esv3350120 1 196735952 196735971 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678365 M 185 1 0 "" NA12878 esv3308417 1 196735961 196735962 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840079,essv7841582,essv7840920 M 185 3 0 "" NA12878,NA12891,NA12892 esv3448047 1 196735961 196735972 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673874,essv8673875,essv8673877 M 185 3 0 "" NA12878,NA12891,NA12892 esv1001848 1 196737734 196750280 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564495 M 3 1 0 "" HuRef nsv4043 1 196738880 196765231 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11145,nssv9386,nssv10430,nssv9656,nssv2664,nssv3628 M 9 6 0 ATP6V1G3 NA12878,NA15510,NA18507,NA18517,NA18555,NA18956 nsv113 1 196739236 196754612 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv113 M 1 1 0 "" NA15510 nsv509591 1 196740608 196753867 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623807 M 4 1 0 "" NA18994 esv1247001 1 196742448 196742448 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4077926 M 2 1 0 "" HuRef nsv1004900 1 196751788 196785581 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489285 M 29084 0 1 ATP6V1G3 nsv548903 1 196755113 196856199 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734250 M 17421 0 1 ATP6V1G3 nsv474653 1 196776613 196776613 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010798 M 9 1 0 ATP6V1G3 NA18956 nsv159683 1 196797725 196797725 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178261 M 24 "" nsv997260 1 196818868 196855319 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483873 M 29084 0 1 "" nsv1003267 1 196831068 196922865 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488236 M 29084 1 0 PTPRC nsv528451 1 196831120 196843886 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705050 M 2026 0 1 "" nsv1002889 1 196855319 196920716 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705491 M 29084 0 1 PTPRC nsv1005876 1 196855319 196990572 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501837 M 29084 1 0 PTPRC esv3438200 1 196878644 196878644 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8639313 M 185 0 0 PTPRC nsv819406 1 196969857 196970056 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419115 M 2 0 1 PTPRC AK1 dgv761n54 1 196990538 197052117 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548904,nsv548905 M 17421 0 2 MIR181A1HG,PTPRC nsv1012175 1 196997890 197044378 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492755 M 29084 1 0 MIR181A1HG nsv1010729 1 197016297 197044378 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490451 M 29084 0 1 MIR181A1HG nsv521385 1 197018024 197023984 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697995 M 2026 0 1 "" nsv548906 1 197031314 197041366 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734253 M 17421 1 0 "" dgv762n54 1 197039980 197041713 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548908,nsv548907 M 17421 0 2 "" esv6634 1 197040116 197042300 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29075 M 1 0 0 "" dgv94n67 1 197040280 197041994 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826108,nsv826130,nsv826119 M 31 0 23 "" AK10,AK12,AK14,AK16,AK20,AK4,AK6,AK8,NA18537,NA18542,NA18547,NA18552,NA18564,NA18570,NA18582,NA18942,NA18947,NA18949,NA18951,NA18969,NA18972,NA18973,NA18999 dgv9e180 1 197040280 197041994 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1007676,esv1006640 M 3 1 0 "" HuRef nsv820979 1 197040280 197041994 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420835 M 1 0 1 "" NA10851 nsv819909 1 197040309 197041904 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419289 M 2 1 0 "" AK1 esv4416 1 197040336 197042136 CNV loss Wang_et_al_2008 18987735 Sequencing essv26857 M 1 0 1 "" YH esv22288 1 197040425 197041994 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14843 M 40 23 0 "" NA07045,NA11931,NA11993,NA11995,NA12239,NA12489,NA12776,NA12878,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18861,NA18909,NA18916,NA19099,NA19129,NA19190,NA19225,NA19240,NA19257 dgv763n54 1 197040665 197041496 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548909,nsv548915,nsv548910,nsv548911,nsv548916 M 17421 0 17 "" dgv764n54 1 197040665 197041821 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548913,nsv548914,nsv548912 M 17421 0 149 "" dgv765n54 1 197040834 197041821 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548920,nsv548919,nsv548918,nsv548917,nsv548924,nsv548925,nsv548922,nsv548923 M 17421 0 18 "" nsv548921 1 197040885 197041929 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734433 M 17421 0 1 "" dgv766n54 1 197041085 197041821 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548927,nsv548926 M 17421 0 3 "" esv275283 1 197074854 197079695 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585110 M 1250 0 1 MIR181A1HG nsv508686 1 197127631 197136267 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622784 M 4 0 1 MIR181A1HG NA18994 esv22629 1 197152743 197153540 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19206 M 40 0 2 MIR181A1HG NA18916,NA19108 nsv946570 1 197184453 197186043 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1812159,nssv1812205,nssv1812161,nssv1812242,nssv1812177,nssv1812201,nssv1812157,nssv1812194,nssv1812174,nssv1812200,nssv1812160,nssv1812210,nssv1812184,nssv1812227,nssv1812179,nssv1812217,nssv1812168,nssv1812198,nssv1812166,nssv1812199,nssv1812240,nssv1812215,nssv1812162,nssv1812245,nssv1812234,nssv1812248,nssv1812163,nssv1812247,nssv1812236,nssv1812202,nssv1812241,nssv1812231,nssv1812173,nssv1812229,nssv1812172,nssv1812212,nssv1812232,nssv1812228,nssv1812164,nssv1812222,nssv1812183,nssv1812244,nssv1812158,nssv1812223,nssv1812176,nssv1812214,nssv1812170,nssv1812243,nssv1812233,nssv1812216,nssv1812167,nssv1812246,nssv1812169,nssv1812250,nssv1812235,nssv1812195,nssv1812186,nssv1812208,nssv1812238,nssv1812197,nssv1812237,nssv1812203,nssv1812239,nssv1812219,nssv1812180,nssv1812192,nssv1812171,nssv1812155,nssv1812175,nssv1812182,nssv1812156,nssv1812249,nssv1812165,nssv1812191,nssv1812188,nssv1812185,nssv1812189,nssv1812226,nssv1812224,nssv1812230,nssv1812196,nssv1812221,nssv1812187,nssv1812251,nssv1812190,nssv1812193,nssv1812225,nssv1812204,nssv1812181,nssv1812209,nssv1812207,nssv1812218,nssv1812206,nssv1812211,nssv1812213,nssv1812178,nssv1812220 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3426030 1 197192365 197192365 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823472 M 185 1 0 "" NA12878 dgv767n54 1 197210463 197353718 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548929,nsv548928 M 17421 0 2 "" nsv441732 1 197215222 197223208 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656854,nssv1656850,nssv1656853,nssv1656852,nssv1656851 M 270 0 5 "" NA18542,NA18852,NA18862,NA19116,NA19120 esv2762215 1 197215222 197223508 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006927 M 1109 0 1 "" RW_0593 nsv548930 1 197279101 197346764 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734446 M 17421 0 1 "" dgv768n54 1 197284766 197369233 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548932,nsv548936,nsv548931,nsv548933,nsv548935,nsv548934,nsv548939 M 17421 0 14 "" nsv470775 1 197295301 197365481 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544408,nssv544409 M 443 0 2 "" HGDP00591,HGDP01060 nsv548937 1 197295301 197412180 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734460 M 17421 0 1 "" nsv467927 1 197300385 197353718 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543063 M 1557 0 1 "" HGDP00623 nsv548938 1 197300385 197353718 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174030 M 17421 0 1 "" HGDP00623 nsv548940 1 197320763 197369233 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734462,nssv734463 M 17421 0 2 "" nsv1013751 1 197339333 197361243 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495174 M 29084 0 1 "" nsv467938 1 197346764 197363900 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543074 M 1557 0 1 "" HGDP01213 nsv548941 1 197346764 197363900 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174031 M 17421 0 1 "" HGDP01213 nsv437264 1 197353718 197382215 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467145 M 60 0 1 "" NA18521 nsv521674 1 197356853 197357762 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698292 M 2026 0 1 "" nsv526650 1 197356853 197358322 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702976 M 2026 0 1 "" esv2764225 1 197373847 197382500 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006932,essv7006929,essv7006930,essv7006928,essv7006934,essv7006931 M 1109 1 5 "" RW_0004,RW_0025,RW_0062,RW_0195,RW_0570,RW_0587 dgv769n54 1 197375029 197380436 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548942,nsv548943 M 17421 0 2 "" esv2450096 1 197375870 197380996 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5378670 M 1 0 1 "" NA18507 nsv548944 1 197376425 197379999 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734466 M 17421 1 0 "" dgv770n54 1 197376425 197380436 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548945,nsv548946 M 17421 0 4 "" esv24372 1 197376789 197380534 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19204 M 40 0 16 "" NA12004,NA12776,NA12828,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA19099,NA19108,NA19114,NA19147,NA19190,NA19225,NA19240 nsv548947 1 197376855 197379288 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734471 M 17421 0 1 "" dgv771n54 1 197376855 197380436 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548949,nsv548961,nsv548964,nsv548948,nsv548967,nsv548956,nsv548951,nsv548950 M 17421 0 122 "" dgv772n54 1 197377250 197380159 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548958,nsv548957,nsv548962,nsv548960,nsv548959,nsv548963,nsv548966,nsv548965,nsv548954,nsv548953,nsv548952,nsv548955 M 17421 0 23 "" esv2763702 1 197377986 197380463 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005133,essv7005155,essv7005144,essv7005122 M 1109 0 4 "" SW_0077,SW_0113,SW_0759,SW_0785 nsv442564 1 197378049 197380463 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619399,nssv1619431,nssv1619367,nssv1619397,nssv1619394,nssv1619384,nssv1619391,nssv1619377,nssv1619407,nssv1619362,nssv1619398,nssv1619378,nssv1619385,nssv1619371,nssv1619363,nssv1619390,nssv1619387,nssv1619403,nssv1619422,nssv1619421,nssv1619428,nssv1619424,nssv1619404,nssv1619388,nssv1619368,nssv1619420,nssv1619396,nssv1619414,nssv1619369,nssv1619425,nssv1619373,nssv1619411,nssv1619433,nssv1619366,nssv1619379,nssv1619361,nssv1619417,nssv1619415,nssv1619372,nssv1619419,nssv1619360,nssv1619381,nssv1619401,nssv1619429,nssv1619430,nssv1619376,nssv1619426,nssv1619418,nssv1619382,nssv1619409,nssv1619400,nssv1619410,nssv1619405,nssv1619395,nssv1619413,nssv1619416,nssv1619386,nssv1619383,nssv1619365,nssv1619427,nssv1619375,nssv1619432,nssv1619402,nssv1619393,nssv1619412,nssv1619423,nssv1619392,nssv1619406,nssv1619380,nssv1619374,nssv1619408,nssv1619370,nssv1619364,nssv1619389 M 270 0 74 "" NA07022,NA10830,NA10835,NA10838,NA10846,NA10857,NA10860,NA11992,NA12004,NA12044,NA12145,NA12154,NA12249,NA12864,NA12873,NA18503,NA18504,NA18506,NA18507,NA18517,NA18521,NA18522,NA18523,NA18852,NA18853,NA18854,NA18855,NA18857,NA18858,NA18859,NA18861,NA18862,NA18870,NA18871,NA18872,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19116,NA19120,NA19130,NA19131,NA19132,NA19137,NA19139,NA19141,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19192,NA19193,NA19194,NA19203,NA19204,NA19205,NA19207,NA19208,NA19209,NA19210,NA19211,NA19222,NA19239,NA19240 nsv548968 1 197378170 197378705 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734617 M 17421 0 1 "" nsv548969 1 197378170 197379229 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734618 M 17421 0 1 "" dgv773n54 1 197378170 197380500 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548971,nsv548970 M 17421 0 2 "" esv2510985 1 197378849 197380849 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5302006 M 1 0 1 "" NA18507 nsv514034 1 197379248 197380432 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2856294,nssv2856305,nssv2856295,nssv2856354,nssv2856261,nssv2856404,nssv2855489,nssv2856307,nssv2856250,nssv2856367,nssv2855487,nssv2856308,nssv2856287,nssv2856377,nssv2856293,nssv2856392,nssv2856278,nssv2856389,nssv2856255,nssv2856369,nssv2856263,nssv2856385,nssv2856269,nssv2856387,nssv2856289,nssv2856400,nssv2856273,nssv2856386,nssv2856247,nssv2856408,nssv2855493,nssv2856356,nssv2856286,nssv2856403,nssv2855505,nssv2856296,nssv2856277,nssv2856395,nssv2855495,nssv2856341,nssv2855491,nssv2856416,nssv2856290,nssv2856361,nssv2856271,nssv2856410,nssv2855501,nssv2856368,nssv2855499,nssv2856320,nssv2856244,nssv2856336,nssv2856260,nssv2856348,nssv2856292,nssv2856335,nssv2856270,nssv2856384,nssv2855488,nssv2856329,nssv2856259,nssv2856300,nssv2856249,nssv2856347,nssv2856252,nssv2856318,nssv2855494,nssv2856330,nssv2856264,nssv2856303,nssv2856288,nssv2856339,nssv2856285,nssv2856382,nssv2855496,nssv2856418,nssv2856284,nssv2856360,nssv2856253,nssv2856378,nssv2856246,nssv2856340,nssv2855486,nssv2856409,nssv2856265,nssv2856413,nssv2856280,nssv2856390,nssv2856268,nssv2856412,nssv2856256,nssv2856376,nssv2856282,nssv2856313,nssv2856267,nssv2856399,nssv2855490,nssv2856383,nssv2856291,nssv2856371,nssv2856262,nssv2856417,nssv2855492,nssv2856324,nssv2855504,nssv2856364,nssv2855503,nssv2856349,nssv2856251,nssv2856325,nssv2855500,nssv2856299,nssv2856254,nssv2856388,nssv2855502,nssv2856328,nssv2856266,nssv2856322,nssv2856279,nssv2856332,nssv2856248,nssv2856343,nssv2855498,nssv2856366,nssv2856258,nssv2856333,nssv2856245,nssv2856397,nssv2856275,nssv2856415,nssv2856276,nssv2856321,nssv2856257,nssv2856298,nssv2856283,nssv2856351,nssv2856274,nssv2856402,nssv2856281,nssv2856342,nssv2856272,nssv2856350,nssv2855497,nssv2856380,nssv2856357,nssv2856331,nssv2856353,nssv2856315,nssv2856398,nssv2856414,nssv2856393,nssv2856323,nssv2856365,nssv2856396,nssv2856375,nssv2856306,nssv2856312,nssv2856370,nssv2856355,nssv2856362,nssv2856352,nssv2856372,nssv2856316,nssv2856391,nssv2856304,nssv2856302,nssv2856309,nssv2856394,nssv2856374,nssv2856363,nssv2856319,nssv2856310,nssv2856337,nssv2856301,nssv2856411,nssv2856297,nssv2856407,nssv2856381,nssv2856344,nssv2856345,nssv2856311,nssv2856405,nssv2856314,nssv2856317,nssv2856379,nssv2856326,nssv2856359,nssv2856327,nssv2856346,nssv2856406,nssv2856373,nssv2856419,nssv2856334,nssv2856338,nssv2856358,nssv2856401 M 2366 0 196 "" NA07022,NA07347,NA07349,NA10830,NA10835,NA10837,NA10838,NA10845,NA10846,NA10857,NA10860,NA11892,NA11930,NA11992,NA12004,NA12044,NA12058,NA12145,NA12154,NA12249,NA12272,NA12335,NA12336,NA12340,NA12341,NA12343,NA12386,NA12399,NA12546,NA12766,NA12776,NA12778,NA12817,NA12828,NA12843,NA12864,NA12873,NA12877,NA12890,NA18484,NA18485,NA18486,NA18487,NA18488,NA18497,NA18498,NA18499,NA18503,NA18504,NA18506,NA18507,NA18510,NA18511,NA18517,NA18522,NA18523,NA18852,NA18853,NA18854,NA18855,NA18857,NA18859,NA18861,NA18862,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18874,NA18875,NA18907,NA18908,NA18910,NA18911,NA18917,NA18924,NA18925,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19114,NA19115,NA19116,NA19117,NA19118,NA19120,NA19121,NA19122,NA19123,NA19130,NA19131,NA19132,NA19137,NA19141,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19174,NA19175,NA19177,NA19181,NA19182,NA19183,NA19184,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19204,NA19205,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19222,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19256,NA21301,NA21302,NA21303,NA21309,NA21312,NA21313,NA21317,NA21360,NA21361,NA21362,NA21365,NA21382,NA21384,NA21387,NA21389,NA21399,NA21400,NA21401,NA21403,NA21438,NA21439,NA21441,NA21447,NA21479,NA21480,NA21486,NA21487,NA21494,NA21522,NA21524,NA21526,NA21580,NA21583,NA21599,NA21608,NA21615,NA21634,NA21636,NA21648,NA21716,NA21717,NA21718 esv2764233 1 197392559 197418073 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006937,essv7006936,essv7006935 M 1109 0 3 "" RW_0145,RW_0665,RW_0669 dgv5n68 1 197420265 197673503 CNV gain Wong_et_al_2007 17160897 BAC aCGH nsv832281,nsv832270 M 95 2 0 "" nsv525766 1 197458099 197460512 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701934 M 2026 0 1 "" esv2764221 1 197497390 197507047 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006939,essv7006938 M 1109 0 2 "" RW_0090,RW_0192 esv8490 1 197509843 197510032 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30931 M 1 0 0 "" nsv473398 1 197586371 197586371 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017627 M 9 1 0 "" NA19129 nsv946571 1 197604983 197614446 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810279,nssv1810254,nssv1810280,nssv1810242,nssv1813193,nssv1810250,nssv1813189,nssv1810247,nssv1813195,nssv1810245,nssv1810219,nssv1810287,nssv1810275,nssv1810270,nssv1812259,nssv1810262,nssv1813188,nssv1810244,nssv1810222,nssv1812252,nssv1812256,nssv1810246,nssv1810227,nssv1810261,nssv1813184,nssv1810251,nssv1810278,nssv1810236,nssv1810229,nssv1810239,nssv1812255,nssv1810290,nssv1810282,nssv1810273,nssv1812257,nssv1810288,nssv1813194,nssv1810249,nssv1810281,nssv1810237,nssv1810226,nssv1810294,nssv1813191,nssv1810259,nssv1810284,nssv1810241,nssv1812254,nssv1810260,nssv1813187,nssv1810228,nssv1812258,nssv1810243,nssv1813185,nssv1810230,nssv1810220,nssv1810231,nssv1810218,nssv1810256,nssv1810276,nssv1810225,nssv1810277,nssv1810267,nssv1810283,nssv1810258,nssv1810223,nssv1810264,nssv1813186,nssv1810252,nssv1813192,nssv1810240,nssv1812253,nssv1810255,nssv1813190,nssv1810263,nssv1810269,nssv1810274,nssv1810293,nssv1810238,nssv1810292,nssv1810234,nssv1810291,nssv1810271,nssv1810235,nssv1810265,nssv1810286,nssv1810253,nssv1810233,nssv1810232,nssv1810266,nssv1810285,nssv1810268,nssv1810224,nssv1810248,nssv1810221,nssv1810257,nssv1810272,nssv1810289 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv524123 1 197614846 197624135 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700001 M 2026 0 1 "" nsv946572 1 197622739 197624329 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810319,nssv1810295,nssv1810314,nssv1810339,nssv1810377,nssv1810364,nssv1810309,nssv1810388,nssv1810307,nssv1810354,nssv1810303,nssv1810383,nssv1810380,nssv1810386,nssv1810324,nssv1810355,nssv1810316,nssv1810359,nssv1810298,nssv1810362,nssv1810373,nssv1810357,nssv1810326,nssv1810325,nssv1810375,nssv1810367,nssv1810300,nssv1810337,nssv1810312,nssv1810345,nssv1810376,nssv1810352,nssv1810304,nssv1810382,nssv1810379,nssv1810369,nssv1810299,nssv1810358,nssv1810305,nssv1810341,nssv1810323,nssv1810387,nssv1810378,nssv1810343,nssv1810372,nssv1810342,nssv1810302,nssv1810384,nssv1810301,nssv1810351,nssv1810317,nssv1810338,nssv1810306,nssv1810344,nssv1810308,nssv1810334,nssv1810315,nssv1810370,nssv1810381,nssv1810391,nssv1810313,nssv1810336,nssv1810374,nssv1810333,nssv1810311,nssv1810328,nssv1810296,nssv1810335,nssv1810310,nssv1810318,nssv1810320,nssv1810346,nssv1810297,nssv1810356,nssv1810340,nssv1810385,nssv1810348,nssv1810361,nssv1810390,nssv1810353,nssv1810389,nssv1810366,nssv1810347,nssv1810360,nssv1810322,nssv1810371,nssv1810332,nssv1810331,nssv1810365,nssv1810368,nssv1810327,nssv1810349,nssv1810350,nssv1810363,nssv1810321,nssv1810329,nssv1810330 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv826143 1 197703209 197703704 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434215 M 31 1 0 "" NA18570 esv2528855 1 197704675 197707529 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5341789 M 1 0 1 "" NA18507 esv8820 1 197705075 197707100 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31261 M 1 0 0 "" esv2318680 1 197705158 197707066 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4861233 M 1 0 1 "" NA18507 esv4930 1 197705327 197706985 CNV loss Wang_et_al_2008 18987735 Sequencing essv27371 M 1 0 1 "" YH nsv511727 1 197705327 197707592 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626371 M 1 0 1 "" 1 esv2399413 1 197714090 197714548 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4693622 M 1 0 1 "" NA18507 nsv467950 1 197738239 197850660 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543086 M 1557 1 0 "" HGDP01368 nsv548972 1 197738239 197850660 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174032 M 17421 1 0 "" HGDP01368 nsv520149 1 197808393 197812030 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682148,nssv661215 M 2026 0 2 "" nsv548973 1 197824395 197832682 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734621 M 17421 1 0 "" esv24849 1 197829410 197833274 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14911,esv11825 M 40 23 0 "" NA11993,NA12004,NA12156,NA12239,NA12414,NA12828,NA12878,NA15510,NA18502,NA18505,NA18511,NA18517,NA18523,NA18861,NA18909,NA18916,NA19099,NA19114,NA19129,NA19147,NA19190,NA19240,NA19257 esv999591 1 197829666 197833411 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564945 M 3 0 1 "" HuRef nsv820449 1 197830355 197833385 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420847 M 1 0 1 "" NA10851 nsv548975 1 197830836 197832682 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734631,nssv734630,nssv734624,nssv734626,nssv734625,nssv734627,nssv734629,nssv734628,nssv734634,nssv734633,nssv734632,nssv734635,nssv734636,nssv734640,nssv734637,nssv734638,nssv734639 M 17421 17 0 "" dgv774n54 1 197830836 197832781 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548976,nsv548974 M 17421 3 2 "" dgv775n54 1 197830836 197833132 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548977,nsv548979,nsv548978 M 17421 0 6 "" nsv548980 1 197831325 197832316 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734650 M 17421 0 1 "" dgv776n54 1 197831325 197833625 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv548981,nsv548984,nsv548982,nsv548986,nsv548987,nsv548985,nsv548988 M 17421 0 23 "" nsv548983 1 197831494 197832682 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734659,nssv734657,nssv734658 M 17421 0 3 "" nsv548989 1 197832101 197833132 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734677 M 17421 0 1 "" esv33996 1 197896906 197897283 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv93482,essv99243 M 51 2 0 "" 22128,22275 nsv832292 1 197907805 198068898 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441614 M 95 1 0 "" nsv1010166 1 197966775 198186641 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705492 M 29084 0 1 "" nsv475497 1 198026542 198026542 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011931 M 9 1 0 "" NA19240 esv33225 1 198032894 198032955 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93982 M 51 0 1 "" 21802 nsv832303 1 198040470 198202979 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441615 M 95 0 1 "" nsv520569 1 198130178 198130783 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv702515,nssv691689,nssv672672 M 2026 1 2 "" nsv1008303 1 198148785 198220389 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495838 M 29084 1 0 "" esv3392772 1 198150264 198150264 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823479 M 185 1 0 "" NA12878 esv3345035 1 198150292 198150292 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701360 M 185 1 0 "" NA12878 esv3379011 1 198150301 198150301 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823480 M 185 1 0 "" NA12878 nsv478438 1 198151513 198151513 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011026 M 9 1 0 "" NA18507 nsv161112 1 198310168 198310487 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179690 M 24 NR5A2 nsv437265 1 198356842 198375169 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467146 M 60 0 1 NR5A2 NA19221 esv3349022 1 198360917 198360936 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597758 M 185 1 0 NR5A2 NA12873 nsv506972 1 198377619 198383619 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619258,nssv617546,nssv623289,nssv620675 M 4 0 0 NR5A2 CHM,NA10860,NA15510,NA18994 nsv947463 1 198410455 198412778 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2763673 M 97 1 0 NR5A2 HGDP00998 esv25770 1 198522137 198526232 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12486 M 40 2 0 "" NA18511,NA18523 esv25840 1 198529688 198530520 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15940 M 40 1 0 "" NA12878 nsv947464 1 198539149 198549482 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2758854 M 97 1 0 "" HGDP00998 dgv23n21 1 198566922 198598828 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv527560,nsv520089 M 2026 2 0 LINC00862 nsv518035 1 198590786 198631496 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695445 M 2026 0 1 LINC00862 nsv548990 1 198636381 198688089 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734678 M 17421 0 1 ZNF281 esv3334401 1 198648971 198649306 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670861,essv8670862 M 185 2 0 "" NA12878,NA19240 nsv998889 1 198769929 198822238 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499567 M 29084 1 0 KIF14 dgv559n100 1 198769929 198849417 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010952,nsv1001769 M 29084 2 0 KIF14 esv2758991 1 198774133 198863600 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756881 M 270 0 1 KIF14 NA12814 nsv478280 1 198798921 198798921 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019530 M 9 1 0 KIF14 NA18507 nsv947465 1 198833800 198839559 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762125 M 97 1 0 KIF14 HGDP00998 dgv95n67 1 198859987 198860482 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826154,nsv826165 M 31 0 2 "" AK10,NA18542 esv2764187 1 198914311 198924545 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006941,essv7006940,essv7006943,essv7006942 M 1109 0 4 "" RW_0062,RW_0158,RW_0188,RW_0646 nsv160731 1 198924789 198934596 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179309 M 24 "" nsv826176 1 198999640 199002930 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1435689 M 31 1 0 CAMSAP2 NA18566 nsv528910 1 199029665 199093392 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705595 M 2026 0 1 CAMSAP2 esv1463839 1 199052538 199052644 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3857846 M 2 0 1 CAMSAP2 HuRef nsv1000619 1 199055442 199115709 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705493 M 29084 1 0 CAMSAP2,GPR25 nsv518356 1 199058577 199078388 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695783 M 2026 0 1 CAMSAP2 nsv548991 1 199058577 199129180 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734679 M 17421 1 0 C1orf106,CAMSAP2,GPR25 nsv1012562 1 199061871 199173096 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496440 M 29084 1 0 C1orf106,CAMSAP2,GPR25 esv33174 1 199093796 199262355 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv97928 M 51 0 1 C1orf106,CAMSAP2,GPR25,KIF21B 21837 nsv946573 1 199099360 199099962 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1810411,nssv1811372,nssv1811340,nssv1811403,nssv1810406,nssv1811357,nssv1811402,nssv1811352,nssv1810404,nssv1811378,nssv1810400,nssv1811371,nssv1810395,nssv1811360,nssv1811401,nssv1811356,nssv1811344,nssv1811386,nssv1810402,nssv1811353,nssv1810403,nssv1811379,nssv1811337,nssv1810392,nssv1810397,nssv1811366,nssv1810398,nssv1811375,nssv1810407,nssv1811373,nssv1811394,nssv1811383,nssv1811393,nssv1811351,nssv1810409,nssv1811349,nssv1811398,nssv1811407,nssv1810401,nssv1811363,nssv1811399,nssv1811380,nssv1811400,nssv1811358,nssv1811396,nssv1811354,nssv1811347,nssv1811390,nssv1811397,nssv1811409,nssv1810399,nssv1811408,nssv1810394,nssv1811364,nssv1810405,nssv1811385,nssv1811341,nssv1811365,nssv1810410,nssv1811392,nssv1811336,nssv1811350,nssv1810408,nssv1811404,nssv1810393,nssv1811359,nssv1811338,nssv1811342,nssv1811345,nssv1811376,nssv1811395,nssv1811343,nssv1810396,nssv1811377,nssv1811411,nssv1811362,nssv1811384,nssv1811367,nssv1811405,nssv1811374,nssv1811348,nssv1811346,nssv1811410,nssv1811369,nssv1811339,nssv1811387,nssv1811381,nssv1811406,nssv1811361,nssv1811368,nssv1811355,nssv1811389,nssv1811412,nssv1811391,nssv1811370,nssv1811382,nssv1811388 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv506973 1 199109010 199115010 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623290 M 4 0 0 GPR25 NA18994 nsv946574 1 199149550 199151196 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811420,nssv1811414,nssv1811415,nssv1811413,nssv1811416,nssv1811417,nssv1811419,nssv1811418,nssv1811422,nssv1811421,nssv1811423 M 97 10 0 C1orf106 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv471904 1 199159069 199159069 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017674 M 9 1 0 "" NA18555 esv3426160 1 199166852 199168150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692090 M 185 1 0 "" NA19239 esv3419962 1 199176764 199176774 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863802,essv7863801 M 185 2 0 "" NA12005,NA18871 esv989611 1 199240972 199253332 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563779 M 3 0 1 KIF21B HuRef esv3364403 1 199242152 199244950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692091 M 185 1 0 KIF21B NA19239 dgv267e59 1 199242252 199243950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3410758,esv3412457 M 185 2 0 KIF21B NA19238,NA19240 nsv472323 1 199246923 199246923 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019231 M 9 1 0 KIF21B NA18555 nsv4054 1 199261133 199287544 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv434 M 9 1 0 CACNA1S NA19240 esv2252164 1 199267602 199268006 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4935860 M 1 0 1 "" NA18507 esv1000350 1 199276066 199279810 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565362 M 3 0 1 CACNA1S HuRef nsv428301 1 199294967 199427097 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv452864 M 62 1 0 ASCL5,CACNA1S,IGFN1,TMEM9 NA18916 nsv515571 1 199345711 199348566 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv663935,nssv685282 M 2026 0 2 CACNA1S esv25305 1 199444497 199447839 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17846,esv16711 M 40 3 0 IGFN1 NA06985,NA12776,NA19108 nsv548992 1 199445093 199446443 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734680,nssv734681 M 17421 0 2 IGFN1 esv1570400 1 199445567 199445783 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4034974 M 2 0 1 IGFN1 HuRef esv1754216 1 199446767 199446767 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4039827 M 2 1 0 IGFN1 HuRef nsv518716 1 199450025 199450396 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696167 M 2026 0 1 IGFN1 nsv515827 1 199479459 199483771 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv692309,nssv654896,nssv675865,nssv664909,nssv673889,nssv662306 M 2026 2 4 "" nsv520734 1 199484965 199500374 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697581 M 2026 0 1 "" esv26568 1 199485448 199489034 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18977,esv13511 M 40 0 2 "" NA12878,NA18916 nsv548993 1 199485461 199487801 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734682 M 17421 0 1 "" nsv548994 1 199485775 199488055 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734683 M 17421 1 0 "" nsv548995 1 199486690 199488425 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734684,nssv734686,nssv734685,nssv734687,nssv734688 M 17421 0 5 "" nsv520413 1 199488425 199489541 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv671283,nssv682834 M 2026 0 2 "" esv22920 1 199490904 199494499 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17602 M 40 1 1 "" NA18909,NA19108 nsv820582 1 199490904 199494499 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420858 M 1 1 0 "" NA10851 dgv268e59 1 199491952 199494650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3417680,esv3434929 M 185 2 0 "" NA19238,NA19240 esv3440061 1 199492752 199494450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692096 M 185 1 0 "" NA19239 esv2168306 1 199493085 199493430 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4548024 M 1 0 1 "" NA18507 esv1105311 1 199493829 199494023 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3665228 M 2 0 1 "" HuRef esv3355674 1 199525652 199528950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692098 M 185 1 0 PKP1 NA19239 nsv480396 1 199543871 199543871 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010994 M 9 0 0 PKP1 nsv947466 1 199544266 199776249 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762274 M 97 1 0 CSRP1,LAD1,PHLDA3,PKP1,RPS10P7,TNNI1,TNNT2 HGDP00456 nsv548996 1 199547272 199566093 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174033 M 17421 0 1 PKP1 HGDP00490 esv992760 1 199551886 199551886 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585841 M 3 1 0 PKP1 HuRef esv1197580 1 199551887 199551887 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4049853 M 2 1 0 PKP1 HuRef nsv467961 1 199552335 199770355 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543097 M 1557 1 0 CSRP1,LAD1,PHLDA3,PKP1,RPS10P7,TNNI1,TNNT2 HGDP00456 nsv548997 1 199552335 199770355 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174034 M 17421 1 0 CSRP1,LAD1,PHLDA3,PKP1,RPS10P7,TNNI1,TNNT2 HGDP00456 nsv470776 1 199555578 199770355 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544411 M 443 1 0 CSRP1,LAD1,PHLDA3,PKP1,RPS10P7,TNNI1,TNNT2 HGDP00456 nsv1002728 1 199562337 199577059 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484760 M 29084 1 0 PKP1 nsv471865 1 199584167 199584167 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013739 M 9 1 0 "" NA18555 nsv473258 1 199589712 199589712 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015920 M 9 1 0 "" NA19129 nsv832315 1 199600214 199761739 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441616 M 95 0 1 CSRP1,LAD1,PHLDA3,RPS10P7,TNNI1,TNNT2 nsv832326 1 199611471 199711638 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441617,nssv1441619 M 95 0 2 LAD1,PHLDA3,TNNI1,TNNT2 nsv508687 1 199616601 199693275 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622785 M 4 0 1 LAD1,TNNI1 NA18994 nsv4065 1 199650307 199684822 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3637 M 9 1 0 TNNI1 NA12878 nsv522795 1 199654771 199655922 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698439 M 2026 0 1 TNNI1 nsv1009060 1 199705727 199727493 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502499 M 29084 1 0 CSRP1 nsv946575 1 199752211 199766584 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811431,nssv1811454,nssv1811449,nssv1811465,nssv1811443,nssv1811480,nssv1811448,nssv1811490,nssv1811439,nssv1811479,nssv1811432,nssv1811470,nssv1811501,nssv1811495,nssv1811438,nssv1811468,nssv1811441,nssv1811464,nssv1811429,nssv1811496,nssv1811510,nssv1811447,nssv1811502,nssv1811451,nssv1811504,nssv1811497,nssv1811505,nssv1811499,nssv1811430,nssv1811487,nssv1811435,nssv1811486,nssv1811436,nssv1811514,nssv1811452,nssv1811460,nssv1811427,nssv1811450,nssv1811445,nssv1811461,nssv1811508,nssv1811457,nssv1811507,nssv1811481,nssv1811506,nssv1811483,nssv1811428,nssv1811474,nssv1811433,nssv1811466,nssv1811437,nssv1811488,nssv1811453,nssv1811494,nssv1811426,nssv1811511,nssv1811455,nssv1811491,nssv1811440,nssv1811515,nssv1811442,nssv1811462,nssv1811444,nssv1811471,nssv1811425,nssv1811459,nssv1811509,nssv1811517,nssv1811434,nssv1811458,nssv1811446,nssv1811512,nssv1811503,nssv1811467,nssv1811516,nssv1811500,nssv1811498,nssv1811485,nssv1811475,nssv1811484,nssv1811513,nssv1811493,nssv1811472,nssv1811492,nssv1811519,nssv1811473,nssv1811489,nssv1811469,nssv1811520,nssv1811477,nssv1811424,nssv1811482,nssv1811476,nssv1811463,nssv1811456,nssv1811518,nssv1811478 M 97 10 0 RPS10P7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv520939 1 199769978 199770355 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694408 M 2026 0 1 "" nsv4077 1 199774631 199807482 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4886 M 9 1 0 "" NA19129 esv33114 1 199784793 199835239 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99789 M 51 1 0 "" 22086 nsv548998 1 199810424 199838694 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734689 M 17421 0 1 "" nsv527756 1 199828298 199831532 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704243 M 2026 0 1 "" nsv472190 1 199869480 199869480 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016351 M 9 1 0 "" NA18555 nsv1012535 1 199898094 199936318 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496418 M 29084 0 1 IPO9-AS1,NAV1 nsv818766 1 199903347 199934485 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417518 M 112 0 1 IPO9-AS1,NAV1 NA18968 nsv826187 1 199961611 199965051 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1439500 M 31 0 1 IPO9-AS1,NAV1 NA18537 nsv478835 1 199973367 199973367 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016905 M 9 1 0 IPO9-AS1,NAV1 NA18507 esv1632559 1 200051763 200051865 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3856469 M 2 0 0 IPO9-AS1,NAV1 HuRef nsv159766 1 200092281 200092281 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178344 M 24 IPO9 nsv521567 1 200127249 200155592 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698184 M 2026 0 1 LMOD1,SHISA4 nsv4088 1 200153719 200164833 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2739 M 9 1 0 LMOD1 NA18555 nsv159297 1 200182977 200188892 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177875 M 24 "" nsv161136 1 200200378 200203268 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179714 M 24 TIMM17A nsv478856 1 200205280 200205280 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018108 M 9 1 0 TIMM17A NA18507 nsv946576 1 200206322 200214698 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811606,nssv1811592,nssv1811530,nssv1811551,nssv1811536,nssv1811593,nssv1811545,nssv1811558,nssv1811528,nssv1811566,nssv1811531,nssv1811617,nssv1811529,nssv1811544,nssv1811532,nssv1811577,nssv1811523,nssv1811594,nssv1811603,nssv1811567,nssv1811546,nssv1811576,nssv1811538,nssv1811587,nssv1811550,nssv1811573,nssv1811526,nssv1811611,nssv1811535,nssv1811561,nssv1811527,nssv1811548,nssv1811601,nssv1811584,nssv1811549,nssv1811585,nssv1811540,nssv1811612,nssv1811605,nssv1811571,nssv1811542,nssv1811583,nssv1811552,nssv1811596,nssv1811604,nssv1811557,nssv1811598,nssv1811565,nssv1811599,nssv1811591,nssv1811607,nssv1811578,nssv1811524,nssv1811521,nssv1811533,nssv1811547,nssv1811600,nssv1811580,nssv1811537,nssv1811608,nssv1811541,nssv1811563,nssv1811543,nssv1811568,nssv1811539,nssv1811555,nssv1811522,nssv1811562,nssv1811525,nssv1811614,nssv1811534,nssv1811575,nssv1811602,nssv1811559,nssv1811553,nssv1811556,nssv1811554,nssv1811613,nssv1811588,nssv1811597,nssv1811590,nssv1811581,nssv1811610,nssv1811564,nssv1811595,nssv1811616,nssv1811609,nssv1811589,nssv1811569,nssv1811582,nssv1811570,nssv1811574,nssv1811560,nssv1811586,nssv1811579,nssv1811572,nssv1811615 M 97 10 0 TIMM17A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv516812 1 200244450 200253041 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv671101,nssv662957,nssv697276 M 2026 0 3 ELF3 esv2045337 1 200268149 200268568 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4698609 M 1 0 1 "" NA18507 nsv522841 1 200386357 200547629 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698493 M 2026 1 0 LGR6,PTPN7,PTPRVP nsv467972 1 200395735 200420206 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543108 M 1557 0 1 PTPN7,PTPRVP HGDP00136 nsv548999 1 200395735 200420206 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174035 M 17421 0 1 PTPN7,PTPRVP HGDP00136 nsv1010102 1 200400399 200496731 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491815 M 29084 1 0 LGR6,PTPRVP nsv946577 1 200418977 200433732 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1811624,nssv1812907,nssv1811625,nssv1812885,nssv1811626,nssv1812897,nssv1811640,nssv1812933,nssv1811637,nssv1812932,nssv1811642,nssv1812886,nssv1811621,nssv1812915,nssv1812922,nssv1812930,nssv1811627,nssv1812576,nssv1811643,nssv1812568,nssv1811635,nssv1812579,nssv1811623,nssv1812569,nssv1812926,nssv1812584,nssv1811632,nssv1812572,nssv1811620,nssv1812578,nssv1812923,nssv1812917,nssv1812570,nssv1812929,nssv1812921,nssv1812906,nssv1811633,nssv1812903,nssv1811639,nssv1812888,nssv1812927,nssv1811641,nssv1812920,nssv1812896,nssv1811629,nssv1812913,nssv1811634,nssv1812904,nssv1812573,nssv1812901,nssv1812918,nssv1812935,nssv1811638,nssv1812577,nssv1812924,nssv1812908,nssv1811619,nssv1812936,nssv1812925,nssv1812909,nssv1811636,nssv1812900,nssv1812919,nssv1812898,nssv1811628,nssv1812582,nssv1811622,nssv1812575,nssv1812571,nssv1812891,nssv1811630,nssv1812902,nssv1811631,nssv1812931,nssv1812574,nssv1812910,nssv1812905,nssv1812580,nssv1812585,nssv1812911,nssv1812889,nssv1812887,nssv1812583,nssv1812916,nssv1812912,nssv1812937,nssv1812890,nssv1811618,nssv1812895,nssv1812581,nssv1812894,nssv1812934,nssv1812892,nssv1812928,nssv1812914,nssv1812893,nssv1812899 M 97 10 0 LGR6,PTPRVP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3891059 1 200420206 200467422 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25792592 M 3017 1 0 LGR6,PTPRVP esv1167532 1 200439983 200439983 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4298034 M 2 1 0 LGR6 HuRef esv1458469 1 200440025 200440025 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4362931 M 2 1 0 LGR6 HuRef esv1038842 1 200440044 200440044 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3706967 M 2 1 0 LGR6 HuRef esv1257220 1 200440960 200441166 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4203806 M 2 0 1 LGR6 HuRef nsv1014912 1 200442508 200478356 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498210 M 29084 1 0 LGR6 nsv473872 1 200475096 200475096 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015038 M 9 1 0 LGR6 NA12156 nsv473896 1 200475110 200475110 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014046 M 9 1 0 LGR6 NA12156 nsv478110 1 200479611 200479611 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020292 M 9 1 0 LGR6 NA18507 nsv473451 1 200591070 200591070 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017533 M 9 1 0 PPP1R12B NA19129 esv29503 1 200604099 200667848 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14824 M 40 0 21 PPP1R12B NA06985,NA07045,NA11993,NA12156,NA12287,NA12414,NA12489,NA12749,NA12828,NA18508,NA18523,NA18861,NA18907,NA18909,NA18916,NA19099,NA19114,NA19129,NA19147,NA19190,NA19225 dgv96n67 1 200604233 200668775 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826209,nsv826231,nsv826220,nsv826198 M 31 0 4 PPP1R12B NA18526,NA18552,NA18973,NA18999 nsv433192 1 200604878 200652543 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463073 M 9 0 1 PPP1R12B NA19129 nsv946578 1 200604892 200609400 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1812948,nssv1812968,nssv1812950,nssv1813011,nssv1812942,nssv1812976,nssv1812947,nssv1812990,nssv1813019,nssv1813010,nssv1812960,nssv1813025,nssv1813020,nssv1812996,nssv1812946,nssv1812994,nssv1813023,nssv1813012,nssv1812962,nssv1813007,nssv1812940,nssv1812982,nssv1812955,nssv1813027,nssv1812949,nssv1812981,nssv1812943,nssv1812983,nssv1812970,nssv1813004,nssv1812945,nssv1813003,nssv1812963,nssv1812993,nssv1812956,nssv1812965,nssv1812941,nssv1813014,nssv1812944,nssv1813000,nssv1812969,nssv1812985,nssv1812966,nssv1813026,nssv1813024,nssv1813034,nssv1812967,nssv1813029,nssv1813018,nssv1813032,nssv1813017,nssv1812998,nssv1813022,nssv1813005,nssv1812951,nssv1812964,nssv1813021,nssv1813033,nssv1812957,nssv1812977,nssv1812952,nssv1812961,nssv1812954,nssv1812997,nssv1812958,nssv1813006,nssv1813016,nssv1813031,nssv1812939,nssv1812972,nssv1813015,nssv1812988,nssv1812953,nssv1813001,nssv1812959,nssv1813030,nssv1812980,nssv1813008,nssv1812938,nssv1813009,nssv1813028,nssv1812995,nssv1812974,nssv1812999,nssv1812979,nssv1813002,nssv1812978,nssv1813013,nssv1812992,nssv1812984,nssv1812986,nssv1812975,nssv1812971,nssv1812987,nssv1812991,nssv1812989,nssv1812973 M 97 10 0 PPP1R12B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1009152 1 200614197 200796856 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586473 M 3 1 0 PPP1R12B HuRef nsv946579 1 200616703 200647096 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813037,nssv1813035,nssv1813044,nssv1813038,nssv1813036,nssv1813042,nssv1813040,nssv1813039,nssv1813043,nssv1813041 M 97 10 0 PPP1R12B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2027802 1 200627277 200627961 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4611730 M 1 0 1 PPP1R12B NA18507 nsv159751 1 200627666 200627905 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178329 M 24 PPP1R12B nsv514037 1 200656528 200668624 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2856423,nssv2854484,nssv2856471,nssv2853260,nssv2856429,nssv2853277,nssv2856503,nssv2854452,nssv2856440,nssv2854463,nssv2856507,nssv2854429,nssv2856453,nssv2854453,nssv2853237,nssv2854434,nssv2853229,nssv2853276,nssv2856430,nssv2853273,nssv2856442,nssv2854414,nssv2853254,nssv2854486,nssv2856500,nssv2854476,nssv2853245,nssv2854422,nssv2853248,nssv2854399,nssv2856458,nssv2854440,nssv2856488,nssv2854441,nssv2856489,nssv2854490,nssv2856483,nssv2854410,nssv2856433,nssv2854445,nssv2856509,nssv2854407,nssv2856477,nssv2854411,nssv2856495,nssv2853259,nssv2853232,nssv2854435,nssv2856424,nssv2854439,nssv2856437,nssv2853278,nssv2856441,nssv2853281,nssv2856474,nssv2853263,nssv2856459,nssv2853272,nssv2856461,nssv2854401,nssv2856498,nssv2854450,nssv2856473,nssv2854418,nssv2853225,nssv2853289,nssv2856496,nssv2853267,nssv2856468,nssv2854409,nssv2856452,nssv2853264,nssv2856485,nssv2853286,nssv2856508,nssv2854400,nssv2856490,nssv2854419,nssv2856466,nssv2854447,nssv2856460,nssv2854416,nssv2856492,nssv2854430,nssv2853224,nssv2854403,nssv2856438,nssv2853275,nssv2856428,nssv2854431,nssv2856487,nssv2854475,nssv2856469,nssv2854427,nssv2856443,nssv2854473,nssv2856506,nssv2854491,nssv2856432,nssv2853270,nssv2853256,nssv2853279,nssv2856446,nssv2854455,nssv2853227,nssv2854428,nssv2853252,nssv2853266,nssv2856486,nssv2853284,nssv2856448,nssv2854437,nssv2856476,nssv2854461,nssv2853255,nssv2854488,nssv2856427,nssv2854480,nssv2856484,nssv2853265,nssv2853240,nssv2853269,nssv2856491,nssv2854442,nssv2853230,nssv2854462,nssv2856422,nssv2854421,nssv2856421,nssv2853282,nssv2853226,nssv2854469,nssv2853235,nssv2854466,nssv2853239,nssv2854483,nssv2856465,nssv2854471,nssv2856439,nssv2854477,nssv2853253,nssv2854472,nssv2856434,nssv2854449,nssv2856464,nssv2854426,nssv2856457,nssv2853283,nssv2853247,nssv2853285,nssv2853241,nssv2854457,nssv2853258,nssv2854464,nssv2856455,nssv2854402,nssv2853246,nssv2853287,nssv2856493,nssv2854413,nssv2856456,nssv2853288,nssv2856472,nssv2854487,nssv2856478,nssv2853262,nssv2853234,nssv2854446,nssv2856497,nssv2854405,nssv2856447,nssv2854479,nssv2856501,nssv2854443,nssv2856445,nssv2854444,nssv2856470,nssv2854432,nssv2856426,nssv2854423,nssv2853243,nssv2853261,nssv2856475,nssv2853274,nssv2853242,nssv2853291,nssv2853244,nssv2854412,nssv2853236,nssv2853271,nssv2856467,nssv2854465,nssv2856504,nssv2854459,nssv2856449,nssv2854456,nssv2853250,nssv2854474,nssv2856499,nssv2854481,nssv2856436,nssv2853268,nssv2853228,nssv2854467,nssv2853233,nssv2854436,nssv2856444,nssv2854425,nssv2856480,nssv2854478,nssv2856450,nssv2854438,nssv2856482,nssv2854454,nssv2853249,nssv2854451,nssv2856481,nssv2853280,nssv2856454,nssv2854448,nssv2853238,nssv2853290,nssv2856510,nssv2854417,nssv2856502,nssv2854460,nssv2856451,nssv2854470,nssv2856431,nssv2854420,nssv2856462,nssv2854408,nssv2856494,nssv2854458,nssv2856479,nssv2854404,nssv2853251,nssv2854406,nssv2853257,nssv2854489,nssv2856505,nssv2854433,nssv2853231,nssv2854424,nssv2856420,nssv2854482,nssv2856425,nssv2854485,nssv2856435,nssv2854468,nssv2856463,nssv2854415 M 2366 252 0 PPP1R12B NA06984,NA06986,NA06993,NA06994,NA06995,NA07022,NA07034,NA07048,NA07051,NA07347,NA07349,NA07357,NA07435,NA10830,NA10835,NA10837,NA10838,NA10845,NA10846,NA10851,NA10856,NA10857,NA10860,NA11829,NA11831,NA11839,NA11843,NA11881,NA11893,NA11917,NA11919,NA11930,NA11992,NA11994,NA12005,NA12043,NA12045,NA12056,NA12144,NA12146,NA12154,NA12155,NA12248,NA12264,NA12272,NA12274,NA12282,NA12286,NA12335,NA12340,NA12344,NA12347,NA12375,NA12399,NA12485,NA12546,NA12716,NA12748,NA12750,NA12752,NA12760,NA12766,NA12775,NA12777,NA12801,NA12812,NA12814,NA12817,NA12827,NA12829,NA12842,NA12864,NA12872,NA12874,NA12877,NA12889,NA12891,NA18485,NA18486,NA18487,NA18497,NA18498,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18509,NA18510,NA18516,NA18519,NA18522,NA18524,NA18558,NA18562,NA18563,NA18572,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18854,NA18856,NA18857,NA18859,NA18860,NA18862,NA18863,NA18868,NA18869,NA18871,NA18872,NA18874,NA18908,NA18910,NA18911,NA18917,NA18923,NA18925,NA18934,NA18935,NA18940,NA18945,NA18948,NA18952,NA18953,NA18959,NA18960,NA18961,NA18965,NA18966,NA18967,NA18970,NA18971,NA18974,NA18990,NA18994,NA18995,NA19000,NA19005,NA19007,NA19012,NA19092,NA19096,NA19098,NA19101,NA19103,NA19107,NA19113,NA19117,NA19119,NA19120,NA19121,NA19123,NA19128,NA19130,NA19138,NA19141,NA19142,NA19144,NA19145,NA19146,NA19150,NA19153,NA19154,NA19160,NA19161,NA19171,NA19173,NA19174,NA19175,NA19177,NA19178,NA19181,NA19184,NA19186,NA19189,NA19191,NA19192,NA19194,NA19198,NA19200,NA19205,NA19207,NA19208,NA19210,NA19211,NA19223,NA19224,NA19236,NA19239,NA19248,NA19249,NA19252,NA19256,NA19258,NA21301,NA21307,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21366,NA21381,NA21383,NA21384,NA21387,NA21389,NA21390,NA21399,NA21401,NA21423,NA21439,NA21440,NA21442,NA21447,NA21453,NA21475,NA21477,NA21478,NA21485,NA21488,NA21490,NA21512,NA21514,NA21522,NA21523,NA21525,NA21581,NA21583,NA21599,NA21608,NA21614,NA21634,NA21648,NA21716,NA21718 nsv946581 1 200660660 200662874 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813054,nssv1813052,nssv1813046,nssv1813048,nssv1813053,nssv1813049,nssv1813051,nssv1813045,nssv1813047,nssv1813050 M 97 10 0 PPP1R12B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv97n67 1 200681239 200797506 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826265,nsv826309,nsv826387,nsv826276,nsv826365,nsv826298,nsv826254,nsv826242,nsv826353,nsv826331,nsv826320,nsv826342,nsv826376,nsv826287 M 31 0 21 PPP1R12B AK12,AK14,AK16,AK18,AK2,AK4,AK6,NA18526,NA18537,NA18552,NA18564,NA18566,NA18582,NA18942,NA18949,NA18951,NA18968,NA18969,NA18973,NA18997,NA18999 esv24486 1 200681547 200797011 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18626 M 40 0 39 PPP1R12B NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv514038 1 200681632 200763088 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2854506,nssv2854703,nssv2854584,nssv2854681,nssv2854533,nssv2854701,nssv2854585,nssv2854620,nssv2854613,nssv2854706,nssv2854595,nssv2854698,nssv2854590,nssv2854691,nssv2854615,nssv2854727,nssv2854525,nssv2854650,nssv2854546,nssv2854672,nssv2854507,nssv2854736,nssv2854524,nssv2854635,nssv2854529,nssv2854651,nssv2854611,nssv2854735,nssv2854603,nssv2854658,nssv2854495,nssv2854657,nssv2854571,nssv2854641,nssv2854492,nssv2854634,nssv2854511,nssv2854661,nssv2854574,nssv2854685,nssv2854605,nssv2854696,nssv2854522,nssv2854654,nssv2854617,nssv2854692,nssv2854502,nssv2854726,nssv2854517,nssv2854686,nssv2854582,nssv2854690,nssv2854564,nssv2854693,nssv2854508,nssv2854704,nssv2854562,nssv2854721,nssv2854528,nssv2854688,nssv2854581,nssv2854639,nssv2854575,nssv2854636,nssv2854598,nssv2854647,nssv2854526,nssv2854670,nssv2854561,nssv2854679,nssv2854566,nssv2854723,nssv2854614,nssv2854680,nssv2854520,nssv2854739,nssv2854503,nssv2854665,nssv2854610,nssv2854662,nssv2854555,nssv2854712,nssv2854514,nssv2854637,nssv2854579,nssv2854713,nssv2854541,nssv2854628,nssv2854591,nssv2854666,nssv2854572,nssv2854660,nssv2854609,nssv2854734,nssv2854565,nssv2854697,nssv2854536,nssv2854731,nssv2854535,nssv2854702,nssv2854549,nssv2854664,nssv2854568,nssv2854676,nssv2854531,nssv2854667,nssv2854616,nssv2854668,nssv2854496,nssv2854728,nssv2854553,nssv2854673,nssv2854538,nssv2854633,nssv2854500,nssv2854669,nssv2854498,nssv2854642,nssv2854580,nssv2854711,nssv2854612,nssv2854722,nssv2854548,nssv2854716,nssv2854516,nssv2854741,nssv2854509,nssv2854653,nssv2854560,nssv2854678,nssv2854578,nssv2854638,nssv2854597,nssv2854709,nssv2854573,nssv2854684,nssv2854606,nssv2854648,nssv2854589,nssv2854714,nssv2854540,nssv2854656,nssv2854556,nssv2854631,nssv2854504,nssv2854663,nssv2854557,nssv2854715,nssv2854587,nssv2854652,nssv2854583,nssv2854618,nssv2854537,nssv2854630,nssv2854544,nssv2854708,nssv2854493,nssv2854674,nssv2854570,nssv2854683,nssv2854501,nssv2854644,nssv2854505,nssv2854724,nssv2854527,nssv2854732,nssv2854563,nssv2854643,nssv2854594,nssv2854625,nssv2854588,nssv2854687,nssv2854567,nssv2854694,nssv2854510,nssv2854646,nssv2854550,nssv2854729,nssv2854513,nssv2854718,nssv2854497,nssv2854627,nssv2854543,nssv2854738,nssv2854512,nssv2854626,nssv2854551,nssv2854624,nssv2854494,nssv2854623,nssv2854592,nssv2854705,nssv2854558,nssv2854629,nssv2854576,nssv2854730,nssv2854577,nssv2854689,nssv2854600,nssv2854619,nssv2854552,nssv2854645,nssv2854569,nssv2854677,nssv2854523,nssv2854725,nssv2854545,nssv2854707,nssv2854599,nssv2854700,nssv2854608,nssv2854655,nssv2854518,nssv2854640,nssv2854499,nssv2854720,nssv2854596,nssv2854719,nssv2854539,nssv2854699,nssv2854521,nssv2854621,nssv2854554,nssv2854717,nssv2854530,nssv2854659,nssv2854534,nssv2854622,nssv2854602,nssv2854671,nssv2854547,nssv2854710,nssv2854559,nssv2854695,nssv2854586,nssv2854632,nssv2854519,nssv2854649,nssv2854593,nssv2854675,nssv2854604,nssv2854737,nssv2854515,nssv2854733,nssv2854607,nssv2854740,nssv2854542,nssv2854742,nssv2854532,nssv2854682,nssv2854601 M 2366 251 0 PPP1R12B NA06984,NA06986,NA06993,NA06994,NA06995,NA07022,NA07034,NA07048,NA07051,NA07347,NA07349,NA07357,NA07435,NA10830,NA10835,NA10837,NA10838,NA10845,NA10846,NA10851,NA10856,NA10857,NA10860,NA11829,NA11831,NA11839,NA11843,NA11881,NA11893,NA11917,NA11919,NA11930,NA11992,NA11994,NA12005,NA12043,NA12045,NA12056,NA12144,NA12146,NA12154,NA12155,NA12248,NA12264,NA12272,NA12274,NA12282,NA12286,NA12335,NA12340,NA12344,NA12347,NA12375,NA12399,NA12485,NA12546,NA12716,NA12748,NA12750,NA12752,NA12760,NA12766,NA12775,NA12777,NA12801,NA12812,NA12814,NA12817,NA12827,NA12829,NA12842,NA12864,NA12872,NA12874,NA12877,NA12889,NA12891,NA18485,NA18486,NA18487,NA18497,NA18498,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18509,NA18510,NA18516,NA18519,NA18522,NA18524,NA18558,NA18562,NA18563,NA18572,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18854,NA18856,NA18857,NA18859,NA18860,NA18862,NA18863,NA18868,NA18869,NA18871,NA18872,NA18874,NA18908,NA18910,NA18911,NA18917,NA18923,NA18925,NA18934,NA18935,NA18940,NA18945,NA18948,NA18952,NA18953,NA18959,NA18960,NA18961,NA18965,NA18967,NA18970,NA18971,NA18974,NA18990,NA18994,NA18995,NA19000,NA19005,NA19007,NA19012,NA19092,NA19096,NA19098,NA19101,NA19103,NA19107,NA19113,NA19117,NA19119,NA19120,NA19121,NA19123,NA19128,NA19130,NA19138,NA19141,NA19142,NA19144,NA19145,NA19146,NA19150,NA19153,NA19154,NA19160,NA19161,NA19171,NA19173,NA19174,NA19175,NA19177,NA19178,NA19181,NA19184,NA19186,NA19189,NA19191,NA19192,NA19194,NA19198,NA19200,NA19205,NA19207,NA19208,NA19210,NA19211,NA19223,NA19224,NA19236,NA19239,NA19248,NA19249,NA19252,NA19256,NA19258,NA21301,NA21307,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21366,NA21381,NA21383,NA21384,NA21387,NA21389,NA21390,NA21399,NA21401,NA21423,NA21439,NA21440,NA21442,NA21447,NA21453,NA21475,NA21477,NA21478,NA21485,NA21488,NA21490,NA21512,NA21514,NA21522,NA21523,NA21525,NA21581,NA21583,NA21599,NA21608,NA21614,NA21634,NA21648,NA21716,NA21718 esv8498 1 200693849 200694346 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30939 M 1 0 0 PPP1R12B esv2379385 1 200693858 200694375 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4685497 M 1 0 1 PPP1R12B NA18507 esv1006468 1 200693941 200694228 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581402 M 3 0 1 PPP1R12B HuRef nsv471538 1 200698967 200795502 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547946,nssv547947,nssv547948 M 3 3 0 PPP1R12B JDW,NA18507,YH nsv946582 1 200706178 200708292 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813146,nssv1813133,nssv1813150,nssv1813087,nssv1813114,nssv1813075,nssv1813098,nssv1813074,nssv1813104,nssv1813077,nssv1813148,nssv1813060,nssv1813142,nssv1813136,nssv1813090,nssv1813137,nssv1813127,nssv1813067,nssv1813106,nssv1813084,nssv1813111,nssv1813076,nssv1813108,nssv1813063,nssv1813107,nssv1813057,nssv1813124,nssv1813132,nssv1813096,nssv1813061,nssv1813121,nssv1813079,nssv1813095,nssv1813073,nssv1813128,nssv1813072,nssv1813117,nssv1813062,nssv1813113,nssv1813086,nssv1813102,nssv1813064,nssv1813129,nssv1813083,nssv1813120,nssv1813059,nssv1813115,nssv1813141,nssv1813151,nssv1813135,nssv1813100,nssv1813080,nssv1813144,nssv1813139,nssv1813131,nssv1813140,nssv1813147,nssv1813058,nssv1813099,nssv1813065,nssv1813110,nssv1813068,nssv1813085,nssv1813138,nssv1813122,nssv1813070,nssv1813105,nssv1813066,nssv1813089,nssv1813071,nssv1813149,nssv1813134,nssv1813094,nssv1813056,nssv1813143,nssv1813069,nssv1813082,nssv1813118,nssv1813081,nssv1813112,nssv1813123,nssv1813116,nssv1813103,nssv1813109,nssv1813055,nssv1813119,nssv1813125,nssv1813145,nssv1813091,nssv1813078,nssv1813097,nssv1813092,nssv1813088,nssv1813101,nssv1813093,nssv1813126,nssv1813130 M 97 10 0 PPP1R12B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946583 1 200708292 200709221 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813161,nssv1813159,nssv1813158,nssv1813156,nssv1813153,nssv1813155,nssv1813157,nssv1813152,nssv1813160,nssv1813154 M 97 10 0 PPP1R12B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946584 1 200731281 200792390 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813169,nssv1813171,nssv1813165,nssv1813168,nssv1813166,nssv1813163,nssv1813162,nssv1813167,nssv1813170,nssv1813164 M 97 10 0 PPP1R12B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3891070 1 200736346 200794644 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25799791 M 3017 0 1 PPP1R12B nsv516501 1 200736346 200813724 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705448,nssv677317,nssv668714,nssv680690 M 2026 4 0 PPP1R12B nsv832337 1 200763310 200945571 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441620,nssv1441624,nssv1441622,nssv1441626,nssv1441621,nssv1441625,nssv1441623,nssv1441627 M 95 0 8 PPP1R12B,SYT2 dgv560n100 1 200826341 200895782 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998898,nsv999941,nsv1011716 M 29084 3 0 SYT2 esv3330144 1 200832752 200834150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692099 M 185 1 0 SYT2 NA19239 nsv1014524 1 200833895 200875629 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705494 M 29084 1 0 SYT2 esv2758992 1 200834012 200990829 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757768 M 270 0 1 KDM5B,SYT2 NA19154 nsv946585 1 200841202 200854065 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814270,nssv1813182,nssv1814247,nssv1813177,nssv1814220,nssv1814210,nssv1814274,nssv1813174,nssv1814208,nssv1813176,nssv1814204,nssv1814197,nssv1814272,nssv1814261,nssv1814214,nssv1813180,nssv1814221,nssv1814200,nssv1814267,nssv1814257,nssv1814231,nssv1814191,nssv1814216,nssv1813179,nssv1814240,nssv1814202,nssv1814227,nssv1814196,nssv1814224,nssv1813183,nssv1814234,nssv1814195,nssv1814215,nssv1814264,nssv1814243,nssv1814198,nssv1814250,nssv1814207,nssv1814253,nssv1814259,nssv1814219,nssv1814263,nssv1814249,nssv1813175,nssv1814252,nssv1814206,nssv1814244,nssv1814209,nssv1814230,nssv1814255,nssv1814236,nssv1813181,nssv1814265,nssv1813178,nssv1814266,nssv1814193,nssv1814218,nssv1814199,nssv1814233,nssv1814190,nssv1814248,nssv1814192,nssv1814213,nssv1814203,nssv1814226,nssv1814194,nssv1814251,nssv1814262,nssv1814271,nssv1814260,nssv1814212,nssv1813173,nssv1814225,nssv1814258,nssv1814246,nssv1814256,nssv1813172,nssv1814238,nssv1814228,nssv1814254,nssv1814222,nssv1814269,nssv1814235,nssv1814223,nssv1814239,nssv1814229,nssv1814273,nssv1814211,nssv1814205,nssv1814245,nssv1814217,nssv1814237,nssv1814242,nssv1814201,nssv1814241,nssv1814268,nssv1814232 M 97 10 0 SYT2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv561n100 1 200850760 200895782 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002319,nsv1009688 M 29084 2 0 SYT2 esv3721 1 200860541 200860844 OTHER complex Wang_et_al_2008 18987735 Sequencing essv26162 M 1 0 0 SYT2 YH nsv946586 1 200863275 200873385 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814307,nssv1814338,nssv1814278,nssv1814314,nssv1814358,nssv1814344,nssv1814294,nssv1814345,nssv1814279,nssv1814313,nssv1814295,nssv1814308,nssv1814304,nssv1814329,nssv1814281,nssv1814370,nssv1814297,nssv1814325,nssv1814277,nssv1814369,nssv1814285,nssv1814336,nssv1814283,nssv1814320,nssv1814288,nssv1814301,nssv1814299,nssv1814367,nssv1814354,nssv1814331,nssv1814293,nssv1814371,nssv1814361,nssv1814364,nssv1814292,nssv1814335,nssv1814356,nssv1814305,nssv1814280,nssv1814317,nssv1814359,nssv1814340,nssv1814303,nssv1814337,nssv1814282,nssv1814328,nssv1814290,nssv1814316,nssv1814306,nssv1814321,nssv1814360,nssv1814311,nssv1814287,nssv1814324,nssv1814357,nssv1814350,nssv1814286,nssv1814346,nssv1814284,nssv1814349,nssv1814289,nssv1814339,nssv1814353,nssv1814365,nssv1814291,nssv1814341,nssv1814296,nssv1814333,nssv1814352,nssv1814327,nssv1814300,nssv1814275,nssv1814355,nssv1814347,nssv1814276,nssv1814330,nssv1814312,nssv1814363,nssv1814318,nssv1814362,nssv1814348,nssv1814368,nssv1814309,nssv1814298,nssv1814315,nssv1814332,nssv1814343,nssv1814366,nssv1814322,nssv1814342,nssv1814326,nssv1814334,nssv1814351,nssv1814310,nssv1814319,nssv1814302,nssv1814323 M 97 10 0 SYT2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv562n100 1 200870271 201044884 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010265,nsv999672 M 29084 2 0 KDM5B,SYT2 nsv4099 1 200875043 200903253 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7953 M 9 1 0 SYT2 NA12156 nsv832348 1 200877039 201048785 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441628 M 95 0 1 KDM5B,PCAT6,SYT2 esv2762216 1 200888925 200892802 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006945 M 1109 0 1 SYT2 RW_0599 esv2545821 1 200907943 200908920 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5207001 M 1 1 0 SYT2 NA18507 nsv7186 1 200910134 200935187 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6062 M 9 0 0 SYT2 NA12156 nsv832359 1 200975039 201154617 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441631 M 95 0 1 KDM5B,KLHL12,LOC148709,LOC641515,PCAT6,RABIF nsv946587 1 201002631 201003131 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814397,nssv1814849,nssv1814404,nssv1814870,nssv1814860,nssv1814827,nssv1814857,nssv1814846,nssv1814856,nssv1814832,nssv1814376,nssv1814844,nssv1814391,nssv1814411,nssv1814375,nssv1814845,nssv1814378,nssv1814847,nssv1814382,nssv1814840,nssv1814859,nssv1814398,nssv1814394,nssv1814395,nssv1814380,nssv1814848,nssv1814858,nssv1814836,nssv1814392,nssv1814818,nssv1814401,nssv1814405,nssv1814383,nssv1814402,nssv1814855,nssv1814867,nssv1814390,nssv1814822,nssv1814396,nssv1814864,nssv1814389,nssv1814829,nssv1814385,nssv1814861,nssv1814374,nssv1814839,nssv1814851,nssv1814826,nssv1814377,nssv1814817,nssv1814400,nssv1814819,nssv1814386,nssv1814850,nssv1814379,nssv1814862,nssv1814854,nssv1814841,nssv1814387,nssv1814821,nssv1814403,nssv1814865,nssv1814853,nssv1814842,nssv1814384,nssv1814843,nssv1814381,nssv1814408,nssv1814388,nssv1814413,nssv1814393,nssv1814825,nssv1814852,nssv1814372,nssv1814373,nssv1814833,nssv1814838,nssv1814837,nssv1814831,nssv1814816,nssv1814410,nssv1814830,nssv1814869,nssv1814834,nssv1814820,nssv1814823,nssv1814828,nssv1814866,nssv1814835,nssv1814409,nssv1814399,nssv1814824,nssv1814863,nssv1814412,nssv1814868,nssv1814406,nssv1814407 M 97 10 0 KDM5B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1740431 1 201004789 201005113 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4309008 M 2 0 1 KDM5B HuRef nsv4110 1 201023263 201056309 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7966 M 9 1 0 KDM5B,PCAT6 NA12156 esv2490406 1 201024930 201025538 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5224693 M 1 1 0 KDM5B NA18507 nsv521757 1 201047153 201047787 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694524 M 2026 0 1 PCAT6 nsv946588 1 201108402 201110160 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814903,nssv1814946,nssv1814881,nssv1814962,nssv1814885,nssv1814943,nssv1814890,nssv1814959,nssv1814954,nssv1814945,nssv1814875,nssv1814909,nssv1814877,nssv1814942,nssv1814953,nssv1814924,nssv1814948,nssv1814907,nssv1814902,nssv1814911,nssv1814955,nssv1814920,nssv1814893,nssv1814941,nssv1814879,nssv1814933,nssv1814872,nssv1814929,nssv1814895,nssv1814871,nssv1814873,nssv1814915,nssv1814889,nssv1814944,nssv1814949,nssv1814906,nssv1814888,nssv1814937,nssv1814957,nssv1814961,nssv1814876,nssv1814898,nssv1814882,nssv1814926,nssv1814900,nssv1814916,nssv1814899,nssv1814908,nssv1814896,nssv1814918,nssv1814878,nssv1814936,nssv1814884,nssv1814964,nssv1814892,nssv1814914,nssv1814880,nssv1814958,nssv1814886,nssv1814905,nssv1814950,nssv1814923,nssv1814951,nssv1814912,nssv1814883,nssv1814917,nssv1814952,nssv1814967,nssv1814874,nssv1814901,nssv1814891,nssv1814919,nssv1814887,nssv1814947,nssv1814956,nssv1814939,nssv1814904,nssv1814938,nssv1814897,nssv1814913,nssv1814927,nssv1814928,nssv1814934,nssv1814922,nssv1814894,nssv1814935,nssv1814930,nssv1814966,nssv1814921,nssv1814925,nssv1814940,nssv1814963,nssv1814931,nssv1814932,nssv1814965,nssv1814910,nssv1814960 M 97 10 0 LOC148709 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946589 1 201127201 201129099 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815000,nssv1815038,nssv1814983,nssv1814994,nssv1815054,nssv1815021,nssv1814976,nssv1815043,nssv1814989,nssv1815040,nssv1814982,nssv1815026,nssv1814987,nssv1815056,nssv1814975,nssv1815017,nssv1814997,nssv1815014,nssv1814972,nssv1815009,nssv1814973,nssv1815006,nssv1815053,nssv1815008,nssv1815052,nssv1814968,nssv1815046,nssv1815030,nssv1814990,nssv1815012,nssv1814999,nssv1815039,nssv1814986,nssv1815042,nssv1815051,nssv1815024,nssv1814985,nssv1815034,nssv1814992,nssv1815041,nssv1814971,nssv1814995,nssv1814978,nssv1815004,nssv1814974,nssv1815058,nssv1815045,nssv1815015,nssv1814977,nssv1815033,nssv1814996,nssv1815023,nssv1814981,nssv1815060,nssv1815050,nssv1815005,nssv1815048,nssv1815061,nssv1814979,nssv1815055,nssv1814980,nssv1815064,nssv1815049,nssv1815016,nssv1814993,nssv1815059,nssv1814988,nssv1815003,nssv1814970,nssv1815013,nssv1814969,nssv1815002,nssv1814984,nssv1815036,nssv1815047,nssv1815020,nssv1815019,nssv1815057,nssv1815044,nssv1815001,nssv1815018,nssv1815035,nssv1815011,nssv1815032,nssv1814998,nssv1815063,nssv1815031,nssv1814991,nssv1815025,nssv1815062,nssv1815028,nssv1815007,nssv1815037,nssv1815022,nssv1815010,nssv1815029,nssv1815027 M 97 10 0 KLHL12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946590 1 201147416 201148900 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815097,nssv1815106,nssv1816010,nssv1815104,nssv1815074,nssv1815984,nssv1816008,nssv1815091,nssv1815066,nssv1815987,nssv1815075,nssv1815108,nssv1816012,nssv1816024,nssv1816017,nssv1816004,nssv1815094,nssv1816027,nssv1815079,nssv1815993,nssv1815084,nssv1816025,nssv1815086,nssv1815985,nssv1815069,nssv1816019,nssv1815077,nssv1816026,nssv1816009,nssv1816020,nssv1816013,nssv1816021,nssv1815076,nssv1816003,nssv1815068,nssv1815111,nssv1815087,nssv1816001,nssv1815073,nssv1815982,nssv1816014,nssv1815996,nssv1815083,nssv1815981,nssv1815082,nssv1815109,nssv1815089,nssv1816002,nssv1815071,nssv1815988,nssv1815096,nssv1815105,nssv1815085,nssv1815065,nssv1815070,nssv1815101,nssv1815067,nssv1815997,nssv1815072,nssv1815989,nssv1815093,nssv1816023,nssv1816016,nssv1815980,nssv1815090,nssv1815103,nssv1816015,nssv1815990,nssv1816011,nssv1815112,nssv1815080,nssv1816005,nssv1815078,nssv1815092,nssv1815081,nssv1815983,nssv1816006,nssv1815986,nssv1816018,nssv1815113,nssv1815110,nssv1815999,nssv1815107,nssv1815099,nssv1815100,nssv1815994,nssv1815995,nssv1816022,nssv1815088,nssv1815991,nssv1815992,nssv1815998,nssv1815102,nssv1815098,nssv1815095,nssv1816000,nssv1816007 M 97 10 0 KLHL12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4121 1 201202459 201240696 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7971 M 9 0 1 CYB5R1,LOC401980 NA12156 nsv832370 1 201232942 201431856 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441632 M 95 0 1 ADORA1,CHI3L1,LOC401980,MYBPH,MYOG,PPFIA4,TMEM183A,TMEM183B nsv4132 1 201247386 201275491 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3648 M 9 1 0 TMEM183A,TMEM183B NA12878 nsv946592 1 201258626 201259624 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816113,nssv1816079,nssv1816060,nssv1816073,nssv1816039,nssv1816104,nssv1816114,nssv1816089,nssv1816109,nssv1816117,nssv1816049,nssv1816088,nssv1816110,nssv1816054,nssv1816030,nssv1816095,nssv1816041,nssv1816101,nssv1816047,nssv1816124,nssv1816034,nssv1816058,nssv1816048,nssv1816116,nssv1816032,nssv1816065,nssv1816037,nssv1816121,nssv1816036,nssv1816070,nssv1816107,nssv1816062,nssv1816042,nssv1816122,nssv1816111,nssv1816071,nssv1816057,nssv1816068,nssv1816038,nssv1816082,nssv1816050,nssv1816075,nssv1816046,nssv1816100,nssv1816045,nssv1816123,nssv1816059,nssv1816090,nssv1816029,nssv1816099,nssv1816043,nssv1816084,nssv1816031,nssv1816097,nssv1816052,nssv1816061,nssv1816033,nssv1816118,nssv1816112,nssv1816067,nssv1816056,nssv1816093,nssv1816108,nssv1816102,nssv1816106,nssv1816078,nssv1816040,nssv1816120,nssv1816053,nssv1816069,nssv1816105,nssv1816055,nssv1816035,nssv1816103,nssv1816044,nssv1816094,nssv1816085,nssv1816077,nssv1816074,nssv1816076,nssv1816115,nssv1816098,nssv1816081,nssv1816087,nssv1816028,nssv1816091,nssv1816086,nssv1816083,nssv1816080,nssv1816066,nssv1816092,nssv1816063,nssv1816119,nssv1816064,nssv1816072,nssv1816051,nssv1816096 M 97 10 0 TMEM183A,TMEM183B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv467983 1 201272721 201314244 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543119 M 1557 0 1 PPFIA4 NINDS_200 nsv549000 1 201272721 201314244 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174036 M 17421 0 1 PPFIA4 NINDS_200 nsv522340 1 201286273 201291390 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694157 M 2026 0 1 PPFIA4 esv22303 1 201288144 201288625 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14072 M 40 1 0 PPFIA4 NA12156 nsv519378 1 201289745 201291390 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696822 M 2026 0 1 PPFIA4 nsv4143 1 201291789 201299154 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7975 M 9 0 1 PPFIA4 NA12156 nsv821421 1 201330618 201332138 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420869 M 1 0 1 "" NA10851 nsv549001 1 201330709 201331757 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734690,nssv734691 M 17421 0 2 "" esv25652 1 201330729 201331890 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18022 M 40 29 0 "" NA06985,NA07037,NA11894,NA11931,NA11993,NA11995,NA12004,NA12239,NA12414,NA12749,NA12776,NA12828,NA12878,NA15510,NA18505,NA18511,NA18517,NA18523,NA18861,NA18907,NA18909,NA19099,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 dgv777n54 1 201331006 201331757 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549003,nsv549004,nsv549002 M 17421 0 21 "" nsv521682 1 201349434 201350631 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698302 M 2026 0 1 "" nsv523111 1 201432004 201435504 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698809 M 2026 0 1 "" esv26033 1 201432090 201433290 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14494 M 40 0 2 "" NA19114,NA19257 esv33921 1 201432797 201433208 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95025 M 51 0 1 "" 22231 nsv549005 1 201448915 201463880 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734713 M 17421 0 1 CHIT1 nsv946593 1 201475553 201503311 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816157,nssv1816193,nssv1816146,nssv1816160,nssv1816127,nssv1816161,nssv1813207,nssv1816167,nssv1816144,nssv1816169,nssv1813200,nssv1816189,nssv1816137,nssv1816188,nssv1816138,nssv1816166,nssv1816154,nssv1816185,nssv1816134,nssv1813215,nssv1816135,nssv1816186,nssv1816129,nssv1816198,nssv1813203,nssv1816162,nssv1816133,nssv1816168,nssv1813206,nssv1816192,nssv1816145,nssv1816194,nssv1813204,nssv1816155,nssv1816139,nssv1813218,nssv1816143,nssv1816148,nssv1816131,nssv1816151,nssv1816142,nssv1813209,nssv1816147,nssv1813196,nssv1816130,nssv1813214,nssv1816153,nssv1813211,nssv1816140,nssv1816179,nssv1816149,nssv1816159,nssv1816156,nssv1816187,nssv1813199,nssv1813197,nssv1816126,nssv1816170,nssv1813202,nssv1813198,nssv1816128,nssv1813210,nssv1813208,nssv1816152,nssv1813201,nssv1813217,nssv1813205,nssv1816181,nssv1816150,nssv1816165,nssv1816132,nssv1816197,nssv1816141,nssv1816164,nssv1816136,nssv1813213,nssv1816196,nssv1813216,nssv1816182,nssv1816176,nssv1816158,nssv1816191,nssv1816172,nssv1816190,nssv1816174,nssv1816173,nssv1816195,nssv1816178,nssv1816175,nssv1816163,nssv1816183,nssv1816184,nssv1816177,nssv1816171,nssv1813212,nssv1816125,nssv1816180 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv527064 1 201476104 201506927 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703443 M 2026 0 1 "" nsv1012201 1 201550420 201575651 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492779 M 29084 1 0 "" nsv478439 1 201559806 201559806 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019090 M 9 1 0 "" NA18507 esv1372584 1 201608968 201609023 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4069426 M 2 0 1 "" HuRef esv2762217 1 201645377 201865815 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006946 M 1109 1 0 ATP2B4,OPTC,PRELP RW_0024 esv1567874 1 201735825 201735825 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3718505 M 2 1 0 OPTC HuRef esv3369656 1 201762552 201763450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692100 M 185 1 0 "" NA19240 esv2452765 1 201764766 201765740 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5257961 M 1 1 0 "" NA18507 esv3391862 1 201764988 201765321 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652060 M 185 1 0 "" NA19240 nsv472270 1 201774357 201774357 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011662 M 9 1 0 "" NA19129 esv995454 1 201790516 201792185 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564251 M 3 1 0 "" HuRef nsv946594 1 201892641 201897350 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813251,nssv1813265,nssv1813239,nssv1813245,nssv1813231,nssv1813267,nssv1813223,nssv1813309,nssv1813230,nssv1813289,nssv1813241,nssv1813290,nssv1813221,nssv1813294,nssv1813234,nssv1813219,nssv1813297,nssv1813252,nssv1813238,nssv1813246,nssv1813222,nssv1813306,nssv1813304,nssv1813285,nssv1813232,nssv1813272,nssv1813227,nssv1813291,nssv1813298,nssv1813242,nssv1813243,nssv1813262,nssv1813237,nssv1813268,nssv1813236,nssv1813263,nssv1813226,nssv1813270,nssv1813224,nssv1813312,nssv1813300,nssv1813277,nssv1813228,nssv1813266,nssv1813240,nssv1813254,nssv1813229,nssv1813281,nssv1813301,nssv1813275,nssv1813247,nssv1813288,nssv1813248,nssv1813264,nssv1813303,nssv1813271,nssv1813225,nssv1813279,nssv1813250,nssv1813259,nssv1813244,nssv1813274,nssv1813299,nssv1813249,nssv1813305,nssv1813258,nssv1813302,nssv1813311,nssv1813235,nssv1813256,nssv1813296,nssv1813284,nssv1813220,nssv1813293,nssv1813233,nssv1813292,nssv1813314,nssv1813295,nssv1813308,nssv1813307,nssv1813253,nssv1813260,nssv1813310,nssv1813286,nssv1813313,nssv1813273,nssv1813287,nssv1813280,nssv1813257,nssv1813278,nssv1813283,nssv1813261,nssv1813282,nssv1813276,nssv1813255,nssv1813269,nssv1813315 M 97 10 0 ATP2B4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv778n54 1 201946557 201952351 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549006,nsv549009,nsv549010,nsv549008 M 17421 0 5 ATP2B4 nsv467994 1 201947115 202001608 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543130 M 1557 0 1 ATP2B4,LAX1,LINC00260,SNORA77 1780862401_A nsv549007 1 201947115 202001608 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174037 M 17421 0 1 ATP2B4,LAX1,LINC00260,SNORA77 1780862401_A esv26128 1 201951054 201952979 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13829,esv11858 M 40 21 0 ATP2B4 NA11931,NA11995,NA12239,NA12414,NA12749,NA12776,NA12828,NA12878,NA15510,NA18505,NA18511,NA18523,NA18861,NA18916,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv820549 1 201951054 201952979 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420880 M 1 0 1 ATP2B4 NA10851 dgv779n54 1 201951571 201952191 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549011,nsv549018 M 17421 0 6 ATP2B4 dgv780n54 1 201951571 201952509 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549023,nsv549028,nsv549021,nsv549012,nsv549024,nsv549027,nsv549014,nsv549013,nsv549020,nsv549019,nsv549015,nsv549016 M 17421 0 169 ATP2B4 dgv781n54 1 201951571 201953753 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549036,nsv549022,nsv549025,nsv549029,nsv549034,nsv549017 M 17421 0 19 ATP2B4 dgv782n54 1 201951725 201952509 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549026,nsv549030,nsv549031,nsv549032,nsv549033 M 17421 0 14 ATP2B4 dgv783n54 1 201951914 201952509 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549037,nsv549035 M 17421 0 12 ATP2B4 esv2512221 1 202030492 202030803 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5332360 M 1 0 1 "" NA18507 nsv946595 1 202030896 202032302 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813348,nssv1813366,nssv1813319,nssv1813357,nssv1813320,nssv1813377,nssv1813341,nssv1813346,nssv1813318,nssv1813380,nssv1813335,nssv1813356,nssv1813338,nssv1813353,nssv1813337,nssv1813354,nssv1813331,nssv1813370,nssv1813387,nssv1813342,nssv1813321,nssv1813364,nssv1813324,nssv1813316,nssv1813388,nssv1813343,nssv1813322,nssv1813359,nssv1813328,nssv1813362,nssv1813394,nssv1813349,nssv1813340,nssv1813363,nssv1813334,nssv1813339,nssv1813333,nssv1813365,nssv1813390,nssv1813369,nssv1813327,nssv1813351,nssv1813323,nssv1813382,nssv1813336,nssv1813368,nssv1813344,nssv1813376,nssv1813393,nssv1813355,nssv1813345,nssv1813371,nssv1813326,nssv1813352,nssv1813330,nssv1813372,nssv1813391,nssv1813385,nssv1813325,nssv1813374,nssv1813389,nssv1813360,nssv1813395,nssv1813361,nssv1813329,nssv1813381,nssv1813392,nssv1813378,nssv1813347,nssv1813383,nssv1813332,nssv1813375,nssv1813386,nssv1813350,nssv1813317,nssv1813379,nssv1813384,nssv1813373,nssv1813358,nssv1813367 M 97 10 0 ZC3H11A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv520482 1 202034951 202067049 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv679660,nssv671804,nssv677636,nssv676246,nssv692396 M 2026 0 5 ZBED6,ZC3H11A nsv522989 1 202036514 202091411 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698659 M 2026 0 1 ZC3H11A nsv946596 1 202037751 202038775 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813428,nssv1813437,nssv1813427,nssv1813433,nssv1813425,nssv1813426,nssv1813404,nssv1813429,nssv1813406,nssv1813464,nssv1813410,nssv1813438,nssv1813400,nssv1813455,nssv1813407,nssv1813447,nssv1813415,nssv1813459,nssv1813411,nssv1813446,nssv1813398,nssv1813457,nssv1813418,nssv1813450,nssv1813420,nssv1813460,nssv1813402,nssv1813432,nssv1813417,nssv1813434,nssv1813421,nssv1813431,nssv1813399,nssv1813422,nssv1813408,nssv1813423,nssv1813474,nssv1813442,nssv1813414,nssv1813436,nssv1813413,nssv1813444,nssv1813401,nssv1813449,nssv1813467,nssv1813445,nssv1813472,nssv1813419,nssv1813403,nssv1813396,nssv1813416,nssv1813462,nssv1813468,nssv1813439,nssv1813424,nssv1813441,nssv1813471,nssv1813443,nssv1813470,nssv1813456,nssv1813466,nssv1813454,nssv1813473,nssv1813440,nssv1813469,nssv1813448,nssv1813475,nssv1813452,nssv1813409,nssv1813461,nssv1813412,nssv1813465,nssv1813397,nssv1813451,nssv1813405,nssv1813430,nssv1813435,nssv1813458,nssv1813463,nssv1813453 M 97 10 0 ZC3H11A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946597 1 202063954 202065806 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814560,nssv1814545,nssv1814514,nssv1814521,nssv1814558,nssv1814539,nssv1813480,nssv1814509,nssv1814559,nssv1814544,nssv1813489,nssv1814550,nssv1814507,nssv1814529,nssv1814501,nssv1814541,nssv1813490,nssv1814546,nssv1813491,nssv1814516,nssv1813484,nssv1814530,nssv1814504,nssv1814517,nssv1814502,nssv1814533,nssv1814503,nssv1814543,nssv1814500,nssv1814536,nssv1813487,nssv1814505,nssv1814557,nssv1814551,nssv1813479,nssv1814512,nssv1813481,nssv1814508,nssv1814499,nssv1814527,nssv1814506,nssv1814524,nssv1813488,nssv1814542,nssv1813483,nssv1814515,nssv1814552,nssv1814532,nssv1814511,nssv1814537,nssv1813486,nssv1814518,nssv1814554,nssv1814519,nssv1814510,nssv1813476,nssv1814556,nssv1814547,nssv1814555,nssv1814549,nssv1813485,nssv1814535,nssv1814553,nssv1814538,nssv1813482,nssv1814523,nssv1814561,nssv1814531,nssv1814498,nssv1814520,nssv1814513,nssv1814548,nssv1813477,nssv1814528,nssv1813478,nssv1814526,nssv1814525,nssv1814540,nssv1814534,nssv1814522 M 97 10 0 ZC3H11A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946598 1 202071377 202075302 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814594,nssv1814622,nssv1814576,nssv1814599,nssv1814582,nssv1814617,nssv1814645,nssv1814655,nssv1814643,nssv1814649,nssv1814581,nssv1814589,nssv1814566,nssv1814597,nssv1814572,nssv1814613,nssv1814587,nssv1814609,nssv1814584,nssv1814630,nssv1814570,nssv1814610,nssv1814583,nssv1814635,nssv1814568,nssv1814596,nssv1814565,nssv1814638,nssv1814575,nssv1814626,nssv1814573,nssv1814653,nssv1814580,nssv1814592,nssv1814642,nssv1814625,nssv1814586,nssv1814656,nssv1814579,nssv1814631,nssv1814567,nssv1814585,nssv1814571,nssv1814621,nssv1814644,nssv1814658,nssv1814590,nssv1814607,nssv1814569,nssv1814619,nssv1814641,nssv1814623,nssv1814591,nssv1814657,nssv1814593,nssv1814601,nssv1814574,nssv1814604,nssv1814577,nssv1814595,nssv1814639,nssv1814588,nssv1814648,nssv1814632,nssv1814640,nssv1814611,nssv1814578,nssv1814616,nssv1814564,nssv1814612,nssv1814646,nssv1814651,nssv1814647,nssv1814654,nssv1814563,nssv1814652,nssv1814603,nssv1814624,nssv1814608,nssv1814606,nssv1814633,nssv1814615,nssv1814602,nssv1814637,nssv1814562,nssv1814600,nssv1814629,nssv1814627,nssv1814614,nssv1814618,nssv1814636,nssv1814605,nssv1814598,nssv1814628,nssv1814650,nssv1814634,nssv1814620 M 97 10 0 ZC3H11A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1633923 1 202075773 202075773 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3994319 M 2 1 0 ZC3H11A HuRef nsv946599 1 202088139 202090130 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814691,nssv1814686,nssv1814690,nssv1812587,nssv1814673,nssv1814703,nssv1814670,nssv1814701,nssv1812599,nssv1814699,nssv1814678,nssv1812590,nssv1812603,nssv1814685,nssv1814665,nssv1814696,nssv1814681,nssv1814707,nssv1814667,nssv1814714,nssv1812601,nssv1812592,nssv1814684,nssv1812593,nssv1814677,nssv1814706,nssv1814661,nssv1814704,nssv1814676,nssv1814698,nssv1814683,nssv1814692,nssv1812607,nssv1814694,nssv1814668,nssv1814689,nssv1812608,nssv1814693,nssv1814664,nssv1814682,nssv1812602,nssv1814710,nssv1814669,nssv1812595,nssv1814672,nssv1812596,nssv1814688,nssv1814709,nssv1814663,nssv1812594,nssv1814687,nssv1814713,nssv1814662,nssv1812591,nssv1814666,nssv1812598,nssv1814679,nssv1814700,nssv1812600,nssv1812589,nssv1814674,nssv1812597,nssv1812605,nssv1814659,nssv1814680,nssv1814715,nssv1812606,nssv1814702,nssv1814671,nssv1814705,nssv1812604,nssv1814708,nssv1814675,nssv1814712,nssv1814660,nssv1814711,nssv1814695,nssv1814697,nssv1812588,nssv1812586 M 97 10 0 ZC3H11A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946600 1 202105458 202106124 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1812630,nssv1812660,nssv1812613,nssv1812676,nssv1812691,nssv1812656,nssv1812640,nssv1812703,nssv1812628,nssv1812666,nssv1812619,nssv1812669,nssv1812631,nssv1812668,nssv1812633,nssv1812670,nssv1812617,nssv1812645,nssv1812634,nssv1812639,nssv1812690,nssv1812659,nssv1812641,nssv1812677,nssv1812624,nssv1812705,nssv1812616,nssv1812651,nssv1812695,nssv1812679,nssv1812626,nssv1812672,nssv1812627,nssv1812632,nssv1812622,nssv1812664,nssv1812614,nssv1812635,nssv1812612,nssv1812636,nssv1812621,nssv1812662,nssv1812611,nssv1812646,nssv1812638,nssv1812658,nssv1812637,nssv1812684,nssv1812689,nssv1812644,nssv1812686,nssv1812663,nssv1812688,nssv1812673,nssv1812618,nssv1812665,nssv1812694,nssv1812699,nssv1812623,nssv1812643,nssv1812615,nssv1812657,nssv1812692,nssv1812642,nssv1812620,nssv1812682,nssv1812687,nssv1812609,nssv1812625,nssv1812680,nssv1812693,nssv1812647,nssv1812610,nssv1812683,nssv1812629,nssv1812648,nssv1812661,nssv1812653,nssv1812655,nssv1812696,nssv1812698,nssv1812667,nssv1812674,nssv1812701,nssv1812681,nssv1812650,nssv1812675,nssv1812649,nssv1812652,nssv1812671,nssv1812654,nssv1812700,nssv1812704,nssv1812678,nssv1812685,nssv1812702,nssv1812697 M 97 10 0 SNRPE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946601 1 202108540 202109933 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1812791,nssv1812745,nssv1812716,nssv1812779,nssv1812728,nssv1812753,nssv1812710,nssv1812801,nssv1812708,nssv1812749,nssv1812718,nssv1812782,nssv1812792,nssv1812760,nssv1812725,nssv1812794,nssv1812737,nssv1812800,nssv1812714,nssv1812750,nssv1812788,nssv1812763,nssv1812730,nssv1812773,nssv1812787,nssv1812766,nssv1812724,nssv1812748,nssv1812713,nssv1812729,nssv1812731,nssv1812765,nssv1812717,nssv1812774,nssv1812711,nssv1812732,nssv1812723,nssv1812799,nssv1812735,nssv1812733,nssv1812719,nssv1812756,nssv1812786,nssv1812769,nssv1812715,nssv1812767,nssv1812734,nssv1812736,nssv1812785,nssv1812754,nssv1812738,nssv1812706,nssv1812709,nssv1812776,nssv1812784,nssv1812740,nssv1812789,nssv1812742,nssv1812720,nssv1812770,nssv1812721,nssv1812755,nssv1812783,nssv1812781,nssv1812722,nssv1812796,nssv1812790,nssv1812752,nssv1812707,nssv1812777,nssv1812726,nssv1812743,nssv1812727,nssv1812741,nssv1812712,nssv1812761,nssv1812762,nssv1812759,nssv1812758,nssv1812757,nssv1812793,nssv1812739,nssv1812802,nssv1812780,nssv1812751,nssv1812744,nssv1812771,nssv1812795,nssv1812764,nssv1812747,nssv1812746,nssv1812778,nssv1812798,nssv1812775,nssv1812768,nssv1812772,nssv1812797 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946603 1 202127318 202144435 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1812813,nssv1812848,nssv1812807,nssv1812868,nssv1812811,nssv1812872,nssv1812825,nssv1813801,nssv1812815,nssv1813800,nssv1812822,nssv1812865,nssv1813809,nssv1812863,nssv1812810,nssv1812842,nssv1813813,nssv1813818,nssv1813811,nssv1813820,nssv1812834,nssv1812870,nssv1812827,nssv1812858,nssv1812828,nssv1812850,nssv1812832,nssv1812845,nssv1812820,nssv1812867,nssv1812821,nssv1812864,nssv1812808,nssv1812873,nssv1813812,nssv1813819,nssv1812806,nssv1812826,nssv1812812,nssv1812862,nssv1813805,nssv1813803,nssv1812831,nssv1813821,nssv1812823,nssv1812871,nssv1813806,nssv1812843,nssv1812818,nssv1812839,nssv1812817,nssv1812853,nssv1812809,nssv1813816,nssv1813808,nssv1812833,nssv1812816,nssv1813823,nssv1812805,nssv1812860,nssv1812814,nssv1813822,nssv1812835,nssv1812830,nssv1812819,nssv1812837,nssv1813807,nssv1812829,nssv1812804,nssv1812866,nssv1813804,nssv1812852,nssv1812824,nssv1812851,nssv1813810,nssv1812838,nssv1812857,nssv1812836,nssv1812874,nssv1812803,nssv1812840,nssv1812875,nssv1812849,nssv1813802,nssv1812855,nssv1812869,nssv1813814,nssv1813817,nssv1812856,nssv1812859,nssv1812854,nssv1812844,nssv1812847,nssv1812846,nssv1813815,nssv1812861,nssv1812841 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2616780 1 202153721 202156912 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5287074 M 1 0 1 "" NA18507 esv2367235 1 202154139 202156650 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4560650 M 1 0 1 "" NA18507 esv2761076 1 202171726 202189118 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005166,essv7005234,essv7005212,essv7005190,essv7005223,essv7005245,essv7005201,essv7005256,essv7005177 M 1109 0 9 "" SW_0072,SW_0099,SW_0144,SW_0605,SW_0791,SW_1054,SW_1428,SW_1448,SW_1472 nsv525331 1 202179061 202184808 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701442 M 2026 0 1 "" nsv549038 1 202190452 202282341 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734939 M 17421 0 1 LINC00303 nsv998796 1 202197421 202235808 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705496 M 29084 0 1 "" dgv7e203 1 202203406 202212248 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array esv2762136,esv2764217 M 1109 0 5 "" RW_0071,RW_0132,RW_0148,RW_0622,SW_0338 nsv441733 1 202204481 202212021 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656855,nssv1656856,nssv1656857 M 270 0 3 "" NA06994,NA07029,NA19204 esv3449081 1 202209718 202209718 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8639336 M 185 0 0 "" esv3348542 1 202209737 202209746 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863803 M 185 1 0 "" NA19172 esv1340488 1 202209746 202209746 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4066433 M 2 1 0 "" HuRef esv3359448 1 202298643 202298684 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863804 M 185 1 0 "" NA12005 nsv520522 1 202364482 202366006 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697467 M 2026 0 1 "" esv2762138 1 202374710 202483769 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005278 M 1109 1 0 ETNK2,GOLT1A,KISS1,PLEKHA6,REN SW_0032 nsv826398 1 202385404 202388893 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432496 M 31 1 0 ETNK2 NA18972 nsv1007228 1 202410750 202452195 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492481 M 29084 1 0 GOLT1A,KISS1 nsv549039 1 202428214 202540879 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734940 M 17421 1 0 GOLT1A,KISS1,PLEKHA6 esv2627051 1 202430424 202431239 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5385199 M 1 1 0 KISS1 NA18507 nsv528249 1 202431314 202432666 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704815 M 2026 0 1 KISS1 esv2477162 1 202440192 202441791 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5307527 M 1 0 1 GOLT1A NA18507 nsv820074 1 202477261 202477711 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418957 M 2 1 0 PLEKHA6 AK1 esv2449168 1 202504719 202505755 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5195219 M 1 1 0 PLEKHA6 NA18507 esv3356911 1 202505081 202505095 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673884,essv8673882,essv8673883 M 185 3 0 PLEKHA6 NA12878,NA12891,NA12892 esv3357110 1 202552494 202552494 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653203,essv8653205,essv8653204 M 185 3 0 PLEKHA6 NA12878,NA12891,NA12892 esv3357869 1 202558352 202559750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692101 M 185 1 0 PLEKHA6 NA19239 nsv946604 1 202581631 202583785 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813826,nssv1813916,nssv1813832,nssv1813869,nssv1813828,nssv1813880,nssv1813835,nssv1813891,nssv1813836,nssv1813896,nssv1813837,nssv1813912,nssv1813844,nssv1813859,nssv1813903,nssv1813911,nssv1813846,nssv1813871,nssv1813908,nssv1813893,nssv1813839,nssv1813864,nssv1813845,nssv1813824,nssv1813853,nssv1813858,nssv1813829,nssv1813898,nssv1813848,nssv1813879,nssv1813855,nssv1813890,nssv1813842,nssv1813882,nssv1813841,nssv1813897,nssv1813906,nssv1813889,nssv1813849,nssv1813868,nssv1813838,nssv1813917,nssv1813831,nssv1813857,nssv1813834,nssv1813875,nssv1813852,nssv1813918,nssv1813901,nssv1813915,nssv1813907,nssv1813887,nssv1813902,nssv1813863,nssv1813910,nssv1813892,nssv1813856,nssv1813881,nssv1813843,nssv1813900,nssv1813904,nssv1813920,nssv1813909,nssv1813914,nssv1813840,nssv1813913,nssv1813905,nssv1813876,nssv1813827,nssv1813865,nssv1813825,nssv1813919,nssv1813833,nssv1813866,nssv1813830,nssv1813883,nssv1813874,nssv1813850,nssv1813888,nssv1813878,nssv1813851,nssv1813860,nssv1813886,nssv1813847,nssv1813854,nssv1813885,nssv1813872,nssv1813877,nssv1813862,nssv1813884,nssv1813870,nssv1813867,nssv1813873,nssv1813899,nssv1813861,nssv1813895,nssv1813894 M 97 10 0 PLEKHA6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv6345 1 202581889 202583716 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28786 M 1 0 0 PLEKHA6 esv3210 1 202581978 202583639 CNV loss Wang_et_al_2008 18987735 Sequencing essv25651 M 1 0 1 PLEKHA6 YH nsv818778 1 202589558 202621867 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417713 M 112 1 0 LINC00628,PLEKHA6 NA18999 esv3344948 1 202611654 202611673 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597925,essv9597880,essv9597892,essv9597914,essv9597903 M 185 5 0 "" NA11881,NA11894,NA11931,NA12043,NA19143 esv3306465 1 202611663 202611664 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7807188,essv7783686,essv7826556,essv7779343,essv7814954,essv7805335,essv7824206,essv7810735,essv7820396,essv7804211,essv7794337,essv7778123,essv7820044,essv7797090,essv7806640,essv7825095,essv7817114,essv7825635,essv7788390,essv7776915,essv7821221,essv7833114,essv7795665,essv7786552,essv7772169,essv7836236,essv7774090,essv7781583,essv7773766,essv7786332,essv7813425,essv7815918,essv7793804,essv7829638,essv7800198,essv7783735,essv7777319,essv7834961 M 185 38 0 "" NA10851,NA11831,NA11881,NA11894,NA11918,NA11919,NA11931,NA12004,NA12006,NA12043,NA12489,NA12751,NA12776,NA12828,NA18502,NA18523,NA18545,NA18558,NA18577,NA18593,NA18608,NA18858,NA18861,NA18870,NA18907,NA18916,NA18940,NA18945,NA18959,NA18961,NA18980,NA19093,NA19099,NA19114,NA19143,NA19147,NA19190,NA19225 esv3338141 1 202611665 202611677 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902778,essv8902773,essv8902764,essv8902786,essv8902801,essv8902800,essv8902794,essv8902766,essv8902771,essv8902785,essv8902790,essv8902765,essv8902777,essv8902797,essv8902772,essv8902795,essv8902791,essv8902782,essv8902768,essv8902775,essv8902796,essv8902784,essv8902767,essv8902793,essv8902798,essv8902804,essv8902787,essv8902783,essv8902802,essv8902789,essv8902799,essv8902770,essv8902788,essv8902779,essv8902776,essv8902774 M 185 36 0 "" NA10851,NA11831,NA11881,NA11918,NA11919,NA11931,NA12004,NA12006,NA12043,NA12489,NA12751,NA12776,NA12828,NA18502,NA18523,NA18545,NA18558,NA18577,NA18593,NA18608,NA18858,NA18861,NA18870,NA18907,NA18916,NA18940,NA18945,NA18959,NA18961,NA18980,NA19093,NA19099,NA19114,NA19147,NA19190,NA19225 nsv525847 1 202626220 202632372 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702041 M 2026 0 1 "" nsv522489 1 202632372 202637037 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705856 M 2026 0 1 "" nsv826409 1 202647269 202650512 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436380 M 31 0 1 PPP1R15B NA18542 esv26808 1 202647732 202651622 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10101,esv14411,esv12296 M 40 0 10 "" NA18517,NA18523,NA18861,NA18909,NA18916,NA19114,NA19129,NA19147,NA19240,NA19257 nsv549040 1 202647798 202650571 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734941 M 17421 0 1 "" nsv826420 1 202648823 202650512 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1427301,nssv1429603,nssv1440169,nssv1435691,nssv1432507,nssv1424471,nssv1437983 M 31 0 7 "" AK14,AK8,NA18564,NA18566,NA18947,NA18951,NA18972 nsv516276 1 202667406 202670282 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv685629,nssv659349,nssv667277,nssv662853 M 2026 0 4 PIK3C2B esv1350665 1 202706843 202706993 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3989075 M 2 0 1 PIK3C2B HuRef nsv826431 1 202785758 202787765 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1421499 M 31 0 1 MDM4 NA18997 nsv4154 1 202791881 202855825 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4904,nssv3667 M 9 2 0 LRRN2,MDM4 NA12878,NA19129 esv3362662 1 202847320 202847330 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863805 M 185 1 0 "" NA12005 esv3328620 1 202861194 202861213 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597936 M 185 1 0 LRRN2 NA12872 esv3336117 1 202906463 202906490 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863806 M 185 1 0 LRRN2 NA12005 nsv506974 1 202927126 202933126 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619259 M 4 0 0 "" NA10860 esv275014 1 202953677 202958821 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585774,essv2585974 M 1250 1 1 "" nsv473835 1 202983680 202983680 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014444 M 9 1 0 "" NA12156 nsv524853 1 203027980 203039360 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700856 M 2026 0 1 "" nsv1003949 1 203033947 203073102 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486003 M 29084 1 0 NFASC nsv999463 1 203035583 203094664 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500263 M 29084 1 0 NFASC nsv1004125 1 203061658 203097657 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705497 M 29084 1 0 NFASC esv3376336 1 203088895 203088923 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902806,essv8902805 M 185 2 0 NFASC NA18856,NA18909 esv3305977 1 203088904 203088905 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7749193,essv7758413 M 185 2 0 NFASC NA18856,NA18909 esv1007437 1 203109907 203121008 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565775 M 3 0 1 NFASC HuRef nsv521899 1 203143589 203147961 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694670 M 2026 0 1 NFASC nsv4165 1 203220255 203252353 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10450 M 9 1 0 NFASC NA18956 nsv549041 1 203242358 203308088 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734942 M 17421 0 1 CNTN2,NFASC nsv819953 1 203322620 203323163 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418997 M 2 0 1 RBBP5 AK1 dgv563n100 1 203337145 203387858 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006398,nsv1008277 M 29084 2 0 DSTYK,RBBP5 nsv468016 1 203350743 203429680 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543151 M 1557 0 1 DSTYK,RBBP5 NINDS_159 nsv549042 1 203350743 203429680 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174038 M 17421 0 1 DSTYK,RBBP5 NINDS_159 esv29655 1 203372947 203374286 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12318 M 40 0 1 "" NA18916 nsv946605 1 203436317 203439982 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1813926,nssv1813977,nssv1814000,nssv1813983,nssv1813941,nssv1813959,nssv1813952,nssv1813954,nssv1813932,nssv1813921,nssv1813925,nssv1813996,nssv1813940,nssv1813956,nssv1813943,nssv1813973,nssv1813950,nssv1813967,nssv1813934,nssv1813958,nssv1814003,nssv1813964,nssv1814007,nssv1813955,nssv1813929,nssv1813992,nssv1814006,nssv1813968,nssv1813930,nssv1814011,nssv1813939,nssv1814008,nssv1814005,nssv1813961,nssv1813945,nssv1813986,nssv1814004,nssv1813976,nssv1813936,nssv1814014,nssv1813942,nssv1813993,nssv1813953,nssv1814009,nssv1813928,nssv1813987,nssv1813924,nssv1813995,nssv1813946,nssv1813960,nssv1813923,nssv1813979,nssv1813933,nssv1813994,nssv1814001,nssv1813965,nssv1813949,nssv1813966,nssv1813935,nssv1813990,nssv1813998,nssv1813989,nssv1814002,nssv1814012,nssv1813927,nssv1813970,nssv1813999,nssv1814016,nssv1813931,nssv1813997,nssv1813937,nssv1813978,nssv1813938,nssv1813985,nssv1813922,nssv1814015,nssv1813975,nssv1813972,nssv1814013,nssv1813984,nssv1813980,nssv1813988,nssv1814010,nssv1813948,nssv1813963,nssv1813947,nssv1813951,nssv1813969,nssv1813982,nssv1813971,nssv1814017,nssv1813944,nssv1813974,nssv1813981,nssv1813962,nssv1813991,nssv1813957 M 97 10 0 DSTYK HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv7237 1 203444971 203445653 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29678 M 1 0 0 DSTYK esv1503810 1 203445294 203445397 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3825156 M 2 0 0 DSTYK HuRef esv3414627 1 203445417 203445417 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701361 M 185 1 0 DSTYK NA12878 nsv477442 1 203485572 203485572 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019490 M 9 1 0 TMCC2 NA18517 nsv832381 1 203525992 203715339 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441633 M 95 1 0 BLACAT1,KLHDC8A,LEMD1,LEMD1-AS1,MIR135B,NUAK2 nsv525872 1 203527797 203529927 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702072 M 2026 0 1 "" nsv946606 1 203586676 203588447 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814414,nssv1814432,nssv1814483,nssv1814469,nssv1814484,nssv1814435,nssv1814488,nssv1814458,nssv1814490,nssv1814496,nssv1814434,nssv1814444,nssv1814430,nssv1814439,nssv1814486,nssv1815115,nssv1814489,nssv1814481,nssv1814023,nssv1814459,nssv1814427,nssv1814456,nssv1814026,nssv1814468,nssv1814482,nssv1814431,nssv1814425,nssv1814453,nssv1814423,nssv1814428,nssv1814422,nssv1814464,nssv1814429,nssv1814474,nssv1814418,nssv1814462,nssv1814487,nssv1814466,nssv1814416,nssv1814018,nssv1814022,nssv1814495,nssv1814025,nssv1814438,nssv1814491,nssv1814450,nssv1814024,nssv1814447,nssv1814020,nssv1814497,nssv1814433,nssv1814465,nssv1814415,nssv1814449,nssv1814419,nssv1814455,nssv1814437,nssv1814494,nssv1814420,nssv1814472,nssv1814021,nssv1814475,nssv1814417,nssv1814467,nssv1814485,nssv1814441,nssv1814426,nssv1814451,nssv1814436,nssv1814446,nssv1814421,nssv1814461,nssv1814424,nssv1814480,nssv1814019,nssv1814454,nssv1814471,nssv1814470,nssv1814477,nssv1814443,nssv1814476,nssv1815114,nssv1815117,nssv1814452,nssv1814457,nssv1814448,nssv1814463,nssv1814479,nssv1814493,nssv1814492,nssv1814478,nssv1814440,nssv1814445,nssv1814460,nssv1814473,nssv1815116,nssv1814442 M 97 10 0 KLHDC8A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1014629 1 203603166 203670860 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497877 M 29084 1 0 BLACAT1,LEMD1,LEMD1-AS1 esv3439684 1 203646814 203646814 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863808,essv7863807 M 185 2 0 LEMD1 NA11992,NA18522 nsv476065 1 203693704 203693704 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014815 M 9 1 0 "" NA12878 nsv4176 1 203701197 203735633 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2745 M 9 1 0 "" NA18555 nsv509602 1 203714590 203800276 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619821 M 4 1 0 CDK18,LOC284578 NA10860 nsv468027 1 203737459 203766324 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543162 M 1557 0 1 CDK18 HGDP00973 nsv549043 1 203737459 203766324 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174039 M 17421 0 1 CDK18 HGDP00973 nsv820091 1 203765769 203767389 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419293 M 2 1 0 CDK18 AK1 nsv549044 1 203792421 203834836 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734943 M 17421 0 1 MFSD4 nsv159784 1 203799213 203799213 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178362 M 24 "" esv6789 1 203839250 203839410 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29230 M 1 0 0 "" esv3302739 1 203839313 203839431 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7738616,essv7737731,essv7738976,essv7736535,essv7732132,essv7732599,essv7733241,essv7737324,essv7735849,essv7733334,essv7736893,essv7735472,essv7735204,essv7736128,essv7734208,essv7735992,essv7737075,essv7731948,essv7734088,essv7737285,essv7737105,essv7733019 M 185 22 0 "" NA07357,NA10851,NA11992,NA11993,NA12004,NA12043,NA12144,NA12287,NA12414,NA12776,NA18501,NA18508,NA18517,NA18858,NA18870,NA18909,NA18945,NA18956,NA19093,NA19108,NA19129,NA19190 esv1125095 1 203839424 203839424 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3765626 M 2 1 0 "" HuRef nsv4188 1 203861202 203895022 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv444 M 9 1 0 ELK4,SLC45A3 NA19240 nsv529048 1 203887792 203888898 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705766 M 2026 1 0 "" esv1009208 1 204066288 204068922 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571562 M 3 0 1 PM20D1 HuRef nsv946607 1 204089540 204148499 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815138,nssv1815155,nssv1815199,nssv1815172,nssv1815133,nssv1815174,nssv1815139,nssv1815161,nssv1815137,nssv1815177,nssv1815201,nssv1815187,nssv1815130,nssv1815148,nssv1815195,nssv1815213,nssv1815140,nssv1815185,nssv1815203,nssv1815212,nssv1815126,nssv1815151,nssv1815119,nssv1815179,nssv1815121,nssv1815160,nssv1815129,nssv1815144,nssv1815136,nssv1815157,nssv1815127,nssv1815207,nssv1815135,nssv1815168,nssv1815142,nssv1815189,nssv1815124,nssv1815162,nssv1815123,nssv1815171,nssv1815202,nssv1815167,nssv1815125,nssv1815210,nssv1815122,nssv1815193,nssv1815146,nssv1815118,nssv1815149,nssv1815190,nssv1815204,nssv1815176,nssv1815197,nssv1815159,nssv1815120,nssv1815180,nssv1815143,nssv1815164,nssv1815147,nssv1815188,nssv1815132,nssv1815192,nssv1815128,nssv1815184,nssv1815150,nssv1815158,nssv1815198,nssv1815154,nssv1815131,nssv1815165,nssv1815196,nssv1815206,nssv1815134,nssv1815183,nssv1815200,nssv1815173,nssv1815166,nssv1815205,nssv1815191,nssv1815156,nssv1815145,nssv1815208,nssv1815141,nssv1815186,nssv1815211,nssv1815170,nssv1815214,nssv1815178,nssv1815175,nssv1815209,nssv1815169,nssv1815194,nssv1815181,nssv1815163,nssv1815152,nssv1815182,nssv1815153 M 97 10 0 LOC284581 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv275594 1 204107895 204111537 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585639,essv2585219 M 1250 1 1 LOC284581 nsv832392 1 204118116 204180656 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441634 M 95 1 0 LOC284581,SLC26A9 esv2249382 1 204120044 204120487 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4501568 M 1 0 1 LOC284581 NA18507 esv2112001 1 204142028 204142431 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv5001272 M 1 0 1 "" NA18507 nsv549045 1 204145311 204150897 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734944 M 17421 0 1 SLC26A9 nsv480249 1 204149875 204149875 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017020 M 9 0 0 SLC26A9 nsv481232 1 204151277 204151277 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012230 M 9 0 0 SLC26A9 nsv480812 1 204151428 204151428 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015505 M 9 0 0 SLC26A9 nsv479107 1 204153361 204153361 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015958 M 9 0 0 SLC26A9 nsv479511 1 204153527 204153527 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019448 M 9 0 0 SLC26A9 nsv481550 1 204153570 204153570 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014488 M 9 0 0 SLC26A9 nsv475664 1 204154339 204154339 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017199 M 9 1 0 SLC26A9 NA12878 nsv479207 1 204155629 204155629 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016970 M 9 0 0 SLC26A9 nsv481089 1 204155762 204155762 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014718 M 9 0 0 SLC26A9 nsv476747 1 204156103 204156103 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017643 M 9 1 0 SLC26A9 NA12878 nsv476521 1 204156408 204156408 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019653 M 9 1 0 SLC26A9 NA12878 nsv475370 1 204157016 204157016 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014974 M 9 1 0 SLC26A9 NA19240 nsv470777 1 204158259 204181508 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544412 M 443 0 1 SLC26A9 HGDP00298 nsv479203 1 204158610 204158610 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012662 M 9 0 0 SLC26A9 nsv479830 1 204159209 204159209 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020407 M 9 0 0 SLC26A9 nsv473847 1 204159533 204159533 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015660 M 9 1 0 SLC26A9 NA12156 nsv480833 1 204159653 204159653 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016400 M 9 0 0 SLC26A9 nsv481605 1 204159705 204159705 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017682 M 9 0 0 SLC26A9 nsv475020 1 204159925 204159925 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013229 M 9 1 0 SLC26A9 NA18956 nsv480339 1 204160565 204160565 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019356 M 9 0 0 SLC26A9 esv29758 1 204161154 204189296 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv21038,esv19366,esv20317 M 40 13 0 SLC26A9 NA11993,NA12156,NA12776,NA18511,NA18858,NA18861,NA18907,NA18916,NA19129,NA19147,NA19190,NA19240,NA19257 nsv480749 1 204161746 204161746 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019938 M 9 0 0 SLC26A9 nsv479422 1 204163332 204163332 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011642 M 9 0 0 SLC26A9 nsv475104 1 204164577 204164577 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017431 M 9 1 0 SLC26A9 NA19240 nsv480933 1 204165335 204165335 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011730 M 9 0 0 SLC26A9 nsv476362 1 204165338 204165338 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019390 M 9 1 0 SLC26A9 NA12878 nsv479879 1 204166746 204166746 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018540 M 9 0 0 SLC26A9 nsv476104 1 204166767 204166767 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011041 M 9 1 0 SLC26A9 NA12878 esv3353279 1 204189076 204189284 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740947 M 185 1 0 "" NA19240 nsv946608 1 204239116 204244050 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815222,nssv1815215,nssv1815225,nssv1815219,nssv1815218,nssv1815223,nssv1815224,nssv1815220,nssv1815217,nssv1815216,nssv1815221 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26345 1 204239359 204372531 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12622,esv14819,esv17780 M 40 21 4 FAM72A NA07037,NA12156,NA12239,NA12414,NA12776,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18523,NA18858,NA18861,NA18907,NA18916,NA19108,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv947047 1 204244050 204251091 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605171,nssv2605177,nssv2605175,nssv2605173,nssv2605174,nssv2605179,nssv2605178,nssv2605176,nssv2605170,nssv2605180,nssv2605172 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946609 1 204251091 204255439 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815249,nssv1815307,nssv1815280,nssv1815304,nssv1815319,nssv1815258,nssv1815271,nssv1815241,nssv1815295,nssv1815245,nssv1815302,nssv1815240,nssv1815290,nssv1815251,nssv1815286,nssv1815230,nssv1815277,nssv1815309,nssv1815293,nssv1815247,nssv1815263,nssv1815234,nssv1815268,nssv1815238,nssv1815287,nssv1815243,nssv1815315,nssv1815305,nssv1815252,nssv1815248,nssv1815259,nssv1815228,nssv1815320,nssv1815311,nssv1815256,nssv1815244,nssv1815265,nssv1815250,nssv1815276,nssv1815255,nssv1815279,nssv1815246,nssv1815275,nssv1815231,nssv1815269,nssv1815303,nssv1815321,nssv1815236,nssv1815285,nssv1815232,nssv1815278,nssv1815235,nssv1815318,nssv1815229,nssv1815298,nssv1815254,nssv1815317,nssv1815227,nssv1815314,nssv1815306,nssv1815253,nssv1815237,nssv1815284,nssv1815312,nssv1815301,nssv1815257,nssv1815272,nssv1815233,nssv1815283,nssv1815308,nssv1815296,nssv1815239,nssv1815297,nssv1815310,nssv1815267,nssv1815242,nssv1815260,nssv1815288,nssv1815292,nssv1815291,nssv1815266,nssv1815300,nssv1815226,nssv1815270,nssv1815281,nssv1815282,nssv1815262,nssv1815313,nssv1815299,nssv1815273,nssv1815294,nssv1815316,nssv1815264,nssv1815322,nssv1815274,nssv1815289,nssv1815261 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946610 1 204255439 204300582 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815326,nssv1815328,nssv1815330,nssv1815324,nssv1815333,nssv1815327,nssv1815325,nssv1815331,nssv1815329,nssv1815323,nssv1815332 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947048 1 204300582 204301171 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605181,nssv2605183,nssv2605189,nssv2605184,nssv2605182,nssv2605190,nssv2605186,nssv2605191,nssv2605185,nssv2605187,nssv2605188 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv946611 1 204301171 204352169 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815342,nssv1815344,nssv1815335,nssv1815337,nssv1815338,nssv1815340,nssv1815339,nssv1815341,nssv1815334,nssv1815336,nssv1815343 M 97 10 0 FAM72A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832414 1 204335918 204438576 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441642,nssv1441643 M 95 2 0 AVPR1B,C1orf186 nsv947049 1 204342851 204347558 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605200,nssv2605194,nssv2605192,nssv2605199,nssv2605193,nssv2605201,nssv2605197,nssv2605198,nssv2605196,nssv2605202,nssv2605195 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv549046 1 204389955 204394075 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734945 M 17421 1 0 AVPR1B nsv819252 1 204390067 204390865 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419085 M 2 1 0 "" AK1 esv1695799 1 204443400 204443703 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3728758 M 2 0 1 C1orf186 HuRef esv1010640 1 204447536 204449155 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563997 M 3 1 0 C1orf186 HuRef esv1000013 1 204447538 204452339 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564663 M 3 0 1 C1orf186 HuRef dgv10e180 1 204447574 204449222 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv990479,esv999615 M 3 0 1 C1orf186 HuRef dgv784n54 1 204448497 204454476 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549047,nsv549048 M 17421 4 0 C1orf186 esv3386019 1 204449052 204453550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692103 M 185 1 0 C1orf186 NA12878 nsv4199 1 204449151 204464292 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6088,nssv3677,nssv2749 M 9 3 0 C1orf186 NA12156,NA12878,NA18555 esv28442 1 204449492 204454807 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv21103 M 40 1 0 C1orf186 NA11931 dgv785n54 1 204451005 204454476 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549049,nsv549050,nsv549051 M 17421 0 5 C1orf186 nsv499241 1 204451703 204451858 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv586169 M 9 1 0 C1orf186 esv991628 1 204452306 204452609 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563557 M 3 1 0 C1orf186 HuRef esv3337264 1 204454252 204454950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692104 M 185 1 0 C1orf186 NA12878 nsv479873 1 204458692 204458692 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018705 M 9 0 0 "" nsv481096 1 204460007 204460007 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012538 M 9 0 0 "" nsv478682 1 204464598 204464598 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014598 M 9 1 0 "" NA18507 nsv478947 1 204473443 204473443 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014564 M 9 1 0 "" NA18507 dgv786n54 1 204482556 204496274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549053,nsv549052,nsv549056,nsv549054,nsv549055,nsv549057,nsv549059,nsv549058 M 17421 0 17 CTSE nsv549060 1 204486861 204496274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734972 M 17421 0 1 CTSE dgv787n54 1 204489539 204496274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549062,nsv549061 M 17421 0 2 CTSE dgv788n54 1 204491693 204496274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549063,nsv549065,nsv549064 M 17421 0 5 CTSE dgv789n54 1 204493121 204496274 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549067,nsv549066 M 17421 0 2 CTSE nsv946612 1 204549491 204650513 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815350,nssv1815347,nssv1815353,nssv1815354,nssv1815346,nssv1815355,nssv1815349,nssv1815352,nssv1815345,nssv1815351,nssv1815348 M 97 10 0 SRGAP2,SRGAP2B,SRGAP2C,SRGAP2D HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821120 1 204620809 204650800 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420891 M 1 1 0 SRGAP2,SRGAP2B,SRGAP2C,SRGAP2D NA10851 esv28559 1 204622578 204670033 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16139,esv18245 M 40 16 0 SRGAP2,SRGAP2B,SRGAP2C,SRGAP2D NA12156,NA12489,NA12878,NA15510,NA18502,NA18505,NA18523,NA18858,NA18907,NA18916,NA19108,NA19129,NA19147,NA19190,NA19225,NA19257 nsv826442 1 204692127 204692683 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440859 M 31 1 0 SRGAP2 NA18969 nsv478296 1 204695172 204695172 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017798 M 9 1 0 SRGAP2 NA18507 dgv564n100 1 204708673 204728491 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010049,nsv1013172 M 29084 2 0 IKBKE,MIR6769B nsv549068 1 204712897 204722255 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734982 M 17421 1 0 IKBKE,MIR6769B nsv160541 1 204766250 204775640 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179119 M 24 RASSF5 nsv946614 1 204767539 204770644 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815369,nssv1815739,nssv1815385,nssv1815730,nssv1815745,nssv1815756,nssv1815366,nssv1815419,nssv1815749,nssv1815383,nssv1815358,nssv1815412,nssv1815387,nssv1815420,nssv1815746,nssv1815738,nssv1815360,nssv1815416,nssv1815375,nssv1815407,nssv1815373,nssv1815395,nssv1815357,nssv1815417,nssv1815371,nssv1815401,nssv1815370,nssv1815382,nssv1815747,nssv1815751,nssv1815367,nssv1815393,nssv1815364,nssv1815391,nssv1815381,nssv1815390,nssv1815388,nssv1815398,nssv1815378,nssv1815737,nssv1815374,nssv1815732,nssv1815372,nssv1815410,nssv1815361,nssv1815389,nssv1815380,nssv1815731,nssv1815377,nssv1815406,nssv1815359,nssv1815413,nssv1815743,nssv1815379,nssv1815744,nssv1815755,nssv1815748,nssv1815386,nssv1815368,nssv1815392,nssv1815384,nssv1815757,nssv1815750,nssv1815399,nssv1815376,nssv1815740,nssv1815365,nssv1815405,nssv1815363,nssv1815760,nssv1815742,nssv1815753,nssv1815362,nssv1815418,nssv1815741,nssv1815733,nssv1815409,nssv1815421,nssv1815402,nssv1815415,nssv1815414,nssv1815397,nssv1815736,nssv1815396,nssv1815408,nssv1815759,nssv1815754,nssv1815411,nssv1815400,nssv1815404,nssv1815758,nssv1815394,nssv1815403,nssv1815752,nssv1815735,nssv1815356,nssv1815734 M 97 10 0 RASSF5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4210 1 204893270 204906468 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3686 M 9 1 0 "" NA12878 nsv8713 1 204923246 204926386 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv23063,nssv27015,nssv21756,nssv24284,nssv22091,nssv23679 M 31 6 0 MAPKAPK2 NA07048,NA10863,NA11830,NA12155,NA12872,NA18504 esv21658 1 204924527 204925571 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19669 M 40 0 1 MAPKAPK2 NA12156 nsv549069 1 204924709 204925459 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734983 M 17421 0 1 MAPKAPK2 nsv946616 1 204935475 204936253 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815814,nssv1815785,nssv1815818,nssv1815845,nssv1815835,nssv1815774,nssv1815797,nssv1815843,nssv1815852,nssv1815844,nssv1815830,nssv1815777,nssv1815836,nssv1815783,nssv1815794,nssv1815850,nssv1815859,nssv1815768,nssv1815806,nssv1815846,nssv1815834,nssv1815771,nssv1815807,nssv1815847,nssv1815839,nssv1815778,nssv1815803,nssv1815772,nssv1815821,nssv1815779,nssv1815804,nssv1815770,nssv1815810,nssv1815767,nssv1815823,nssv1815786,nssv1815822,nssv1815782,nssv1815829,nssv1815781,nssv1815817,nssv1815773,nssv1815838,nssv1815849,nssv1815764,nssv1815788,nssv1815813,nssv1815795,nssv1815819,nssv1815769,nssv1815851,nssv1815776,nssv1815856,nssv1815848,nssv1815812,nssv1815765,nssv1815791,nssv1815775,nssv1815811,nssv1815766,nssv1815816,nssv1815792,nssv1815825,nssv1815796,nssv1815808,nssv1815789,nssv1815855,nssv1815784,nssv1815832,nssv1815842,nssv1815831,nssv1815793,nssv1815827,nssv1815780,nssv1815802,nssv1815841,nssv1815800,nssv1815824,nssv1815805,nssv1815837,nssv1815840,nssv1815833,nssv1815826,nssv1815815,nssv1815828,nssv1815798,nssv1815857,nssv1815853,nssv1815820,nssv1815858,nssv1815787,nssv1815860,nssv1815801,nssv1815809,nssv1815854,nssv1815799,nssv1815790 M 97 10 0 MAPKAPK2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2314071 1 204983785 204984111 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4737632 M 1 0 1 "" NA18507 esv2597499 1 205020979 205022471 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5251871 M 1 0 1 "" NA18507 esv2116724 1 205021655 205022204 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4834058 M 1 0 1 "" NA18507 esv1601718 1 205068101 205068101 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4109934 M 2 1 0 IL19 HuRef esv3407405 1 205068101 205068101 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701362 M 185 1 0 IL19 NA12878 esv997006 1 205077473 205085250 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565609 M 3 0 1 IL19 HuRef nsv521261 1 205097608 205102270 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697873 M 2026 0 1 "" nsv549070 1 205097608 205107282 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv734985,nssv734984 M 17421 0 2 IL20 nsv1010486 1 205116454 205271653 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705498 M 29084 1 0 C1orf116,FAIM3,FCAMR,IL24,PIGR esv3329069 1 205127152 205128350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692105 M 185 1 0 "" NA19239 nsv468049 1 205134463 205203961 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543183 M 1557 0 1 FAIM3,FCAMR,IL24,PIGR NINDS_21 nsv549071 1 205134463 205203961 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174040 M 17421 0 1 FAIM3,FCAMR,IL24,PIGR NINDS_21 nsv946617 1 205147489 205150136 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816202,nssv1816263,nssv1816285,nssv1816243,nssv1816280,nssv1816246,nssv1816210,nssv1816199,nssv1816211,nssv1816240,nssv1816220,nssv1816262,nssv1816277,nssv1816235,nssv1816219,nssv1816275,nssv1816228,nssv1816288,nssv1816212,nssv1816267,nssv1816279,nssv1816234,nssv1816218,nssv1816266,nssv1816283,nssv1816269,nssv1816201,nssv1816259,nssv1816284,nssv1816236,nssv1816208,nssv1816222,nssv1816203,nssv1816295,nssv1816207,nssv1816292,nssv1816282,nssv1816225,nssv1816200,nssv1816272,nssv1816217,nssv1816268,nssv1816231,nssv1816229,nssv1816216,nssv1816242,nssv1816221,nssv1816287,nssv1816205,nssv1816233,nssv1816276,nssv1816293,nssv1816223,nssv1816260,nssv1816214,nssv1816244,nssv1816209,nssv1816261,nssv1816230,nssv1816290,nssv1816204,nssv1816238,nssv1816227,nssv1816255,nssv1816278,nssv1816241,nssv1816224,nssv1816253,nssv1816281,nssv1816294,nssv1816213,nssv1816239,nssv1816206,nssv1816250,nssv1816215,nssv1816265,nssv1816289,nssv1816270,nssv1816271,nssv1816232,nssv1816248,nssv1816264,nssv1816256,nssv1816249,nssv1816257,nssv1816226,nssv1816273,nssv1816251,nssv1816252,nssv1816254,nssv1816291,nssv1816286,nssv1816274,nssv1816237,nssv1816247,nssv1816258,nssv1816245 M 97 10 0 FAIM3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv512755 1 205164378 205164383 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625384 M 1 1 0 "" 1 esv2425494 1 205164443 205165291 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5267206 M 1 1 0 "" NA18507 esv3375038 1 205186293 205186312 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597947 M 185 1 0 PIGR NA12814 nsv832426 1 205202152 205369439 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441644 M 95 1 0 C1orf116,C4BPA,C4BPB,FCAMR,PFKFB2,YOD1 nsv526285 1 205202614 205210137 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702564 M 2026 0 1 FCAMR nsv472009 1 205226739 205226739 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014711 M 9 1 0 "" NA18555 esv3349454 1 205253652 205256250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692106 M 185 1 0 "" NA19239 nsv946618 1 205284018 205285261 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816375,nssv1816344,nssv1816317,nssv1816343,nssv1816305,nssv1816296,nssv1816309,nssv1816355,nssv1816371,nssv1816334,nssv1816366,nssv1816340,nssv1816321,nssv1816332,nssv1816328,nssv1816342,nssv1816316,nssv1816359,nssv1816315,nssv1816360,nssv1816302,nssv1816333,nssv1816367,nssv1816356,nssv1816303,nssv1816364,nssv1816298,nssv1816357,nssv1816301,nssv1816363,nssv1816300,nssv1816331,nssv1816314,nssv1816365,nssv1816304,nssv1816326,nssv1816372,nssv1816337,nssv1816370,nssv1816339,nssv1816308,nssv1816319,nssv1816310,nssv1816358,nssv1816374,nssv1816349,nssv1816369,nssv1816354,nssv1816306,nssv1816322,nssv1816313,nssv1816336,nssv1816318,nssv1816330,nssv1816325,nssv1816341,nssv1816311,nssv1816335,nssv1816320,nssv1816352,nssv1816368,nssv1816338,nssv1816299,nssv1816347,nssv1816324,nssv1816353,nssv1816327,nssv1816351,nssv1816307,nssv1816329,nssv1816373,nssv1816350,nssv1816297,nssv1816362,nssv1816312,nssv1816348,nssv1816361,nssv1816345,nssv1816323,nssv1816346 M 97 10 0 YOD1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv475618 1 205300194 205300194 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014517 M 9 1 0 PFKFB2 NA12878 nsv526699 1 205303147 205310474 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703038 M 2026 0 1 PFKFB2 nsv946619 1 205323810 205325019 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816401,nssv1816441,nssv1816397,nssv1816424,nssv1816454,nssv1816399,nssv1816389,nssv1816468,nssv1816395,nssv1816431,nssv1816462,nssv1816426,nssv1816457,nssv1816450,nssv1816396,nssv1816466,nssv1816405,nssv1816423,nssv1816384,nssv1816463,nssv1816458,nssv1816428,nssv1816385,nssv1816434,nssv1816408,nssv1816435,nssv1816456,nssv1816422,nssv1816394,nssv1816467,nssv1816379,nssv1816425,nssv1816387,nssv1816433,nssv1816380,nssv1816429,nssv1816378,nssv1816412,nssv1816388,nssv1816439,nssv1816377,nssv1816420,nssv1816453,nssv1816451,nssv1816461,nssv1816376,nssv1816459,nssv1816414,nssv1816390,nssv1816440,nssv1816393,nssv1816452,nssv1816398,nssv1816406,nssv1816460,nssv1816436,nssv1816381,nssv1816465,nssv1816382,nssv1816444,nssv1816400,nssv1816417,nssv1816391,nssv1816411,nssv1816455,nssv1816413,nssv1816404,nssv1816437,nssv1816407,nssv1816449,nssv1816386,nssv1816446,nssv1816383,nssv1816472,nssv1816392,nssv1816445,nssv1816443,nssv1816419,nssv1816464,nssv1816402,nssv1816410,nssv1816415,nssv1816470,nssv1816438,nssv1816448,nssv1816469,nssv1816471,nssv1816403,nssv1816427,nssv1816421,nssv1816409,nssv1816430,nssv1816447,nssv1816418,nssv1816442,nssv1816432,nssv1816416 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv511134 1 205357749 205360119 CNV gain Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624488 M 1 1 0 C4BPA 1 esv1000470 1 205358868 205359825 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564887 M 3 0 1 C4BPA HuRef esv9705 1 205358882 205359997 CNV loss Ahn_et_al_2009 19470904 Sequencing essv32146 M 1 0 0 C4BPA esv7318 1 205358968 205360051 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29759 M 1 0 0 C4BPA esv28463 1 205359125 205359831 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16778 M 40 28 0 C4BPA NA06985,NA07037,NA11894,NA11993,NA11995,NA12004,NA12239,NA12414,NA12749,NA12776,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19225,NA19240,NA19257 nsv821224 1 205359125 205359831 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420902 M 1 0 1 C4BPA NA10851 dgv790n54 1 205359137 205359796 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549072,nsv549076,nsv549075 M 17421 0 54 C4BPA nsv549073 1 205359137 205359796 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv735592,nssv735821,nssv735573,nssv735491,nssv735739,nssv735475,nssv735661,nssv735775,nssv735601,nssv735776,nssv735679,nssv735792,nssv735650,nssv735622,nssv735621,nssv735515,nssv735747,nssv735773,nssv735673,nssv735377,nssv735774,nssv735789,nssv735404,nssv735342,nssv735772,nssv735245,nssv735770,nssv735338,nssv735771,nssv735760,nssv735574,nssv735768,nssv735761,nssv735769,nssv735778,nssv735779,nssv735791,nssv735788,nssv735777,nssv735649,nssv735339,nssv735438,nssv735252,nssv735875,nssv735781,nssv735780,nssv735627,nssv735786,nssv735784,nssv735783,nssv735822,nssv735782,nssv735790,nssv735793,nssv735820,nssv735239,nssv735401,nssv735724,nssv735237,nssv735803,nssv735802,nssv735654,nssv735651,nssv735476,nssv735485,nssv735484,nssv735794,nssv735876,nssv735653,nssv735427,nssv735800,nssv735798,nssv735238,nssv735652,nssv735799,nssv735796,nssv735818,nssv735801,nssv735797,nssv735795,nssv735244,nssv735817,nssv735809,nssv735243,nssv735808,nssv735819,nssv735807,nssv735655,nssv735806,nssv735659,nssv735483,nssv735660,nssv735804,nssv735805,nssv735814,nssv735241,nssv735815,nssv735240,nssv735242,nssv735657,nssv735813,nssv735658,nssv735812,nssv735656,nssv735810,nssv735811,nssv735823,nssv735540,nssv735416,nssv735594,nssv735385,nssv735399,nssv735824,nssv735596,nssv735250,nssv735490,nssv735471,nssv735246,nssv735376,nssv735254,nssv735251,nssv735678,nssv735840,nssv735593,nssv735745,nssv735668,nssv735662,nssv735600,nssv735426,nssv735328,nssv735833,nssv735842,nssv735834,nssv735327,nssv735839,nssv735672,nssv735825,nssv735665,nssv735474,nssv735595,nssv735832,nssv735831,nssv735664,nssv735830,nssv735663,nssv735829,nssv735826,nssv735828,nssv735827,nssv735666,nssv735667,nssv735248,nssv735337,nssv735841,nssv735414,nssv735873,nssv735843,nssv735838,nssv735835,nssv735836,nssv735249,nssv735837,nssv735247,nssv735489,nssv735599,nssv735671,nssv735402,nssv735669,nssv735852,nssv735332,nssv735861,nssv735874,nssv735853,nssv735597,nssv735850,nssv735872,nssv735844,nssv735331,nssv735677,nssv735725,nssv735329,nssv735846,nssv735845,nssv735851,nssv735848,nssv735330,nssv735849,nssv735847,nssv735854,nssv735386,nssv735333,nssv735472,nssv735488,nssv735403,nssv735676,nssv735865,nssv735859,nssv735860,nssv735598,nssv735670,nssv735871,nssv735335,nssv735397,nssv735858,nssv735864,nssv735855,nssv735856,nssv735863,nssv735862,nssv735857,nssv735334,nssv735866,nssv735675,nssv735487,nssv735336,nssv735870,nssv735473,nssv735486,nssv735867,nssv735674,nssv735869,nssv735868,nssv735363,nssv735620,nssv735623,nssv735693,nssv735880,nssv735605,nssv735879,nssv735406,nssv735705,nssv735706,nssv735351,nssv735685,nssv735878,nssv735726,nssv735877,nssv735723,nssv735717,nssv735785,nssv735816,nssv735493,nssv735684,nssv735492,nssv735253,nssv735884,nssv735881,nssv735885,nssv735886,nssv735883,nssv735716,nssv735882,nssv735613,nssv735415,nssv735375,nssv735606,nssv735343,nssv735888,nssv735887,nssv735405,nssv735411,nssv735359,nssv735498,nssv735362,nssv735602,nssv735384,nssv735700,nssv735683,nssv735626,nssv735356,nssv735383,nssv735603,nssv735350,nssv735348,nssv735680,nssv735349,nssv735539,nssv735681,nssv735497,nssv735347,nssv735682,nssv735496,nssv735345,nssv735344,nssv735346,nssv735499,nssv735495,nssv735494,nssv735711,nssv735500,nssv735617,nssv735699,nssv735694,nssv735382,nssv735625,nssv735408,nssv735715,nssv735366,nssv735413,nssv735538,nssv735712,nssv735374,nssv735507,nssv735513,nssv735365,nssv735361,nssv735504,nssv735624,nssv735503,nssv735619,nssv735501,nssv735502,nssv735381,nssv735506,nssv735604,nssv735508,nssv735505,nssv735512,nssv735409,nssv735380,nssv735698,nssv735702,nssv735713,nssv735372,nssv735697,nssv735714,nssv735710,nssv735696,nssv735701,nssv735379,nssv735537,nssv735618,nssv735695,nssv735511,nssv735704,nssv735371,nssv735509,nssv735709,nssv735370,nssv735378,nssv735514,nssv735708,nssv735707,nssv735369,nssv735703,nssv735510,nssv735367,nssv735394,nssv735730,nssv735373,nssv735482,nssv735721,nssv735358,nssv735718,nssv735519,nssv735545,nssv735446,nssv735734,nssv735354,nssv735440,nssv735424,nssv735616,nssv735392,nssv735615,nssv735687,nssv735470,nssv735559,nssv735631,nssv735355,nssv735236,nssv735536,nssv735518,nssv735541,nssv735632,nssv735516,nssv735428,nssv735523,nssv735787,nssv735517,nssv735391,nssv735529,nssv735766,nssv735629,nssv735390,nssv735752,nssv735748,nssv735735,nssv735763,nssv735633,nssv735423,nssv735728,nssv735607,nssv735628,nssv735326,nssv735543,nssv735522,nssv735751,nssv735743,nssv735388,nssv735542,nssv735421,nssv735572,nssv735733,nssv735731,nssv735389,nssv735419,nssv735521,nssv735418,nssv735544,nssv735722,nssv735729,nssv735340,nssv735732,nssv735727,nssv735520,nssv735417,nssv735353,nssv735412,nssv735396,nssv735434,nssv735686,nssv735737,nssv735524,nssv735634,nssv735528,nssv735364,nssv735750,nssv735749,nssv735738,nssv735527,nssv735445,nssv735741,nssv735433,nssv735439,nssv735558,nssv735736,nssv735546,nssv735526,nssv735432,nssv735422,nssv735692,nssv735352,nssv735431,nssv735550,nssv735549,nssv735429,nssv735525,nssv735551,nssv735548,nssv735547,nssv735744,nssv735444,nssv735552,nssv735436,nssv735612,nssv735742,nssv735648,nssv735441,nssv735437,nssv735435,nssv735395,nssv735360,nssv735553,nssv735591,nssv735557,nssv735443,nssv735740,nssv735635,nssv735630,nssv735442,nssv735554,nssv735555,nssv735556,nssv735341,nssv735583,nssv735638,nssv735754,nssv735455,nssv735565,nssv735368,nssv735590,nssv735447,nssv735746,nssv735759,nssv735614,nssv735575,nssv735532,nssv735530,nssv735755,nssv735101,nssv735762,nssv735481,nssv735571,nssv735454,nssv735235,nssv735450,nssv735430,nssv735393,nssv735257,nssv735691,nssv735407,nssv735753,nssv735689,nssv735449,nssv735448,nssv735255,nssv735569,nssv735425,nssv735560,nssv735535,nssv735611,nssv735469,nssv735563,nssv735562,nssv735564,nssv735647,nssv735561,nssv735256,nssv735608,nssv735765,nssv735070,nssv735757,nssv735758,nssv735688,nssv735756,nssv735582,nssv735041,nssv735020,nssv735012,nssv735013,nssv735010,nssv735011,nssv735531,nssv735576,nssv735014,nssv735566,nssv735019,nssv735637,nssv735018,nssv735015,nssv735017,nssv735016,nssv735024,nssv735387,nssv735568,nssv735026,nssv735023,nssv735025,nssv735021,nssv735040,nssv735022,nssv735031,nssv735038,nssv735027,nssv735028,nssv735039,nssv735036,nssv735030,nssv735029,nssv735035,nssv735032,nssv735037,nssv735034,nssv735033,nssv735068,nssv735044,nssv735577,nssv735567,nssv735099,nssv735045,nssv735043,nssv735042,nssv735046,nssv735055,nssv735047,nssv735049,nssv735048,nssv735050,nssv735052,nssv735053,nssv735054,nssv735051,nssv735452,nssv735059,nssv735581,nssv735100,nssv735058,nssv735056,nssv735057,nssv735069,nssv735067,nssv735075,nssv735074,nssv735073,nssv735061,nssv735060,nssv735066,nssv735063,nssv735062,nssv735065,nssv735072,nssv735636,nssv735064,nssv735071,nssv735077,nssv735453,nssv735085,nssv735076,nssv735078,nssv735578,nssv735084,nssv735079,nssv735764,nssv735083,nssv735082,nssv735081,nssv735080,nssv735090,nssv735098,nssv735086,nssv735089,nssv735088,nssv735087,nssv735580,nssv735451,nssv735579,nssv735096,nssv735092,nssv735091,nssv735097,nssv735095,nssv735094,nssv735093,nssv735234,nssv735468,nssv735458,nssv735111,nssv735324,nssv735641,nssv735104,nssv735589,nssv735110,nssv735646,nssv735570,nssv735197,nssv735103,nssv735102,nssv735109,nssv735144,nssv735105,nssv735106,nssv735108,nssv735192,nssv735107,nssv735113,nssv735112,nssv735457,nssv735116,nssv735122,nssv735115,nssv735114,nssv735117,nssv735420,nssv735143,nssv735534,nssv735121,nssv735119,nssv735258,nssv735767,nssv735120,nssv735118,nssv735142,nssv735325,nssv735123,nssv735128,nssv735410,nssv735456,nssv735127,nssv735126,nssv735125,nssv735124,nssv735141,nssv735131,nssv735129,nssv735132,nssv735130,nssv735134,nssv735135,nssv735133,nssv735139,nssv735140,nssv735138,nssv735137,nssv735136,nssv735173,nssv735460,nssv735584,nssv735196,nssv735153,nssv735145,nssv735152,nssv735146,nssv735151,nssv735150,nssv735147,nssv735149,nssv735148,nssv735157,nssv735155,nssv735154,nssv735156,nssv735158,nssv735172,nssv735161,nssv735162,nssv735159,nssv735160,nssv735357,nssv735168,nssv735171,nssv735166,nssv735165,nssv735163,nssv735167,nssv735164,nssv735170,nssv735690,nssv735169,nssv735610,nssv735461,nssv735195,nssv735639,nssv735174,nssv735175,nssv735459,nssv735179,nssv735177,nssv735176,nssv735178,nssv735640,nssv735184,nssv735180,nssv735189,nssv735183,nssv735190,nssv735182,nssv735194,nssv735181,nssv735188,nssv735185,nssv735193,nssv735186,nssv735187,nssv735191,nssv735588,nssv735609,nssv735220,nssv735203,nssv735587,nssv735202,nssv735233,nssv735232,nssv735261,nssv735479,nssv735198,nssv735201,nssv735200,nssv735199,nssv735206,nssv735219,nssv735719,nssv735204,nssv735205,nssv735260,nssv735208,nssv735209,nssv735207,nssv735259,nssv735218,nssv735212,nssv735211,nssv735210,nssv735217,nssv735215,nssv735214,nssv735213,nssv735216,nssv735533,nssv735586,nssv735400,nssv735463,nssv735467,nssv735264,nssv735270,nssv735263,nssv735231,nssv735224,nssv735262,nssv735281,nssv735223,nssv735269,nssv735642,nssv735280,nssv735585,nssv735222,nssv735266,nssv735265,nssv735268,nssv735221,nssv735267,nssv735272,nssv735229,nssv735271,nssv735230,nssv735462,nssv735273,nssv735279,nssv735464,nssv735228,nssv735226,nssv735227,nssv735225,nssv735274,nssv735278,nssv735276,nssv735277,nssv735275,nssv735398,nssv735480,nssv735300,nssv735282,nssv735286,nssv735720,nssv735285,nssv735283,nssv735290,nssv735284,nssv735466,nssv735287,nssv735289,nssv735288,nssv735299,nssv735291,nssv735293,nssv735292,nssv735294,nssv735296,nssv735298,nssv735295,nssv735297,nssv735309,nssv735645,nssv735303,nssv735302,nssv735301,nssv735307,nssv735308,nssv735478,nssv735322,nssv735305,nssv735306,nssv735304,nssv735465,nssv735644,nssv735643,nssv735311,nssv735310,nssv735312,nssv735316,nssv735321,nssv735477,nssv735315,nssv735317,nssv735314,nssv735313,nssv735320,nssv735323,nssv735318,nssv735319 M 17421 2 877 C4BPA dgv791n54 1 205359137 205360403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549074,nsv549077 M 17421 0 7 C4BPA esv2764240 1 205388217 205412365 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006951,essv7006953,essv7006952 M 1109 0 3 "" RW_0090,RW_0284,RW_0554 nsv946620 1 205388882 205393798 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816559,nssv1816515,nssv1816474,nssv1816500,nssv1816484,nssv1816545,nssv1816554,nssv1816506,nssv1816551,nssv1816539,nssv1816485,nssv1816568,nssv1816494,nssv1816560,nssv1816505,nssv1816544,nssv1816492,nssv1816527,nssv1816483,nssv1816563,nssv1816498,nssv1816528,nssv1816557,nssv1816525,nssv1816502,nssv1816547,nssv1816555,nssv1816522,nssv1816486,nssv1816523,nssv1816487,nssv1816538,nssv1816558,nssv1816519,nssv1816493,nssv1816532,nssv1816481,nssv1816564,nssv1816477,nssv1816531,nssv1816556,nssv1816526,nssv1816491,nssv1816530,nssv1816476,nssv1816513,nssv1816495,nssv1816509,nssv1816490,nssv1816511,nssv1816552,nssv1816536,nssv1816482,nssv1816517,nssv1816479,nssv1816521,nssv1816478,nssv1816548,nssv1816497,nssv1816520,nssv1816475,nssv1816565,nssv1816504,nssv1816561,nssv1816501,nssv1816541,nssv1816480,nssv1816508,nssv1816550,nssv1816503,nssv1816488,nssv1816510,nssv1816553,nssv1816562,nssv1816489,nssv1816569,nssv1816533,nssv1816549,nssv1816537,nssv1816514,nssv1816534,nssv1816473,nssv1816499,nssv1816542,nssv1816496,nssv1816546,nssv1816529,nssv1816507,nssv1816566,nssv1816518,nssv1816540,nssv1816567,nssv1816516,nssv1816543,nssv1816535,nssv1816512,nssv1816524 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1002014 1 205463872 205599568 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483280 M 29084 1 0 CD55 nsv4221 1 205593395 205624180 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4924,nssv2665 M 9 0 2 CD55 NA18555,NA19129 nsv508688 1 205596836 205621072 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620145 M 4 0 1 CD55 NA15510 nsv506975 1 205604298 205610298 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617547,nssv623291 M 4 0 0 "" CHM,NA18994 nsv435651 1 205607052 205612772 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465872 M 2 0 1 "" NA15510 esv2650191 1 205608075 205612939 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5373166 M 1 0 1 "" NA18507 nsv511728 1 205608162 205612707 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626372 M 1 0 1 "" 1 esv1950731 1 205608448 205612396 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4653155 M 1 0 1 "" NA18507 dgv4n47 1 205608586 205612260 CNV loss Kidd_et_al_2010b 21111241 Sequencing nsv498703,nsv498704 M 9 0 2 "" esv22151 1 205608618 205612197 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16894,esv15956 M 40 12 1 "" NA07045,NA11993,NA11995,NA12156,NA12239,NA12489,NA12828,NA18502,NA18517,NA18909,NA19108,NA19225,NA19257 nsv820725 1 205608618 205612197 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420913 M 1 0 1 "" NA10851 nsv826453 1 205608618 205612197 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434903,nssv1424483,nssv1432518,nssv1427302,nssv1421500,nssv1437984,nssv1437262,nssv1423841,nssv1424001,nssv1426435,nssv1436381,nssv1431862,nssv1433464,nssv1425548,nssv1431120,nssv1428067,nssv1434216,nssv1437996 M 31 0 18 "" AK10,AK18,AK20,AK4,AK6,AK8,NA18526,NA18542,NA18547,NA18570,NA18582,NA18942,NA18947,NA18949,NA18951,NA18968,NA18972,NA18997 esv990476 1 205608641 205613065 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563909 M 3 0 1 "" HuRef esv1229841 1 205608658 205612259 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3619098 M 2 0 1 "" HuRef dgv11e180 1 205609146 205612167 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1004602,esv998815 M 3 0 1 "" HuRef nsv826464 1 205610009 205612167 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430389,nssv1424788,nssv1440860,nssv1435692,nssv1423172,nssv1438622,nssv1428864 M 31 0 7 "" AK12,AK16,AK2,NA18566,NA18969,NA18973,NA18999 nsv549078 1 205610297 205610475 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv735926,nssv735937,nssv735936,nssv735934,nssv735927,nssv735935,nssv735928,nssv735933,nssv735932,nssv735930,nssv735931,nssv735929,nssv735938,nssv735940,nssv735939,nssv735942,nssv735941,nssv735946,nssv735945,nssv735943,nssv735944 M 17421 0 21 "" nsv549079 1 205610297 205612121 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv735981,nssv735982,nssv735988,nssv735979,nssv735980,nssv735952,nssv735950,nssv735978,nssv735977,nssv735949,nssv735951,nssv735947,nssv735948,nssv735954,nssv735964,nssv735962,nssv735955,nssv735953,nssv735963,nssv735975,nssv735956,nssv735961,nssv735976,nssv735960,nssv735959,nssv735957,nssv735958,nssv735973,nssv735966,nssv735967,nssv735965,nssv735972,nssv735971,nssv735974,nssv735968,nssv735970,nssv735969,nssv735985,nssv735987,nssv735984,nssv735983,nssv735986 M 17421 1 41 "" dgv792n54 1 205610444 205611718 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549080,nsv549081 M 17421 3 0 "" nsv511128 1 205610444 205620431 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626254 M 1 0 1 "" 1 nsv549082 1 205611367 205619905 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv735992 M 17421 1 0 "" nsv549083 1 205611718 205612121 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv735994,nssv735995,nssv735993,nssv735996,nssv736007,nssv736006,nssv735998,nssv736004,nssv736005,nssv735997,nssv736003,nssv736002,nssv736001,nssv736000,nssv736008,nssv735999 M 17421 0 16 "" nsv549084 1 205611930 205612121 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736009,nssv736019,nssv736018,nssv736012,nssv736013,nssv736017,nssv736014,nssv736016,nssv736015,nssv736011,nssv736010 M 17421 0 11 "" nsv549085 1 205611930 205619905 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736020 M 17421 0 1 "" esv2758993 1 205624518 205991690 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757769 M 270 5 1 CR1,CR1L,CR2 NA07048,NA07056,NA10857,NA12750,NA18501,NA19141 esv3308488 1 205690652 205690653 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838502,essv7837117,essv7837521 M 185 3 0 "" NA19238,NA19239,NA19240 esv3304723 1 205690656 205690657 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7752841,essv7747190,essv7755903,essv7754591,essv7756070,essv7755598,essv7745928,essv7750375 M 185 8 0 "" NA18505,NA18861,NA18870,NA19102,NA19108,NA19114,NA19239,NA19240 nsv508690 1 205744364 205837057 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617393,nssv618998,nssv622786,nssv620146 M 4 0 4 CR1 CHM,NA10860,NA15510,NA18994 nsv946621 1 205746051 205747051 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816602,nssv1816609,nssv1816656,nssv1816604,nssv1816651,nssv1816610,nssv1816652,nssv1816632,nssv1816584,nssv1816597,nssv1816591,nssv1816606,nssv1816587,nssv1816621,nssv1816579,nssv1816622,nssv1816589,nssv1816644,nssv1816576,nssv1816636,nssv1816599,nssv1816665,nssv1816595,nssv1816641,nssv1816582,nssv1816612,nssv1816583,nssv1816625,nssv1816647,nssv1816613,nssv1816653,nssv1816603,nssv1816578,nssv1816657,nssv1816655,nssv1816619,nssv1816574,nssv1816635,nssv1816590,nssv1816620,nssv1816580,nssv1816629,nssv1816588,nssv1816660,nssv1816577,nssv1816628,nssv1816592,nssv1816662,nssv1816649,nssv1816623,nssv1816648,nssv1816645,nssv1816575,nssv1816661,nssv1816594,nssv1816634,nssv1816581,nssv1816633,nssv1816601,nssv1816627,nssv1816573,nssv1816616,nssv1816598,nssv1816608,nssv1816585,nssv1816618,nssv1816571,nssv1816659,nssv1816654,nssv1816646,nssv1816650,nssv1816626,nssv1816572,nssv1816638,nssv1816586,nssv1816624,nssv1816666,nssv1816611,nssv1816570,nssv1816617,nssv1816630,nssv1816593,nssv1816614,nssv1816600,nssv1816615,nssv1816596,nssv1816658,nssv1816637,nssv1816643,nssv1816639,nssv1816605,nssv1816631,nssv1816642,nssv1816664,nssv1816663,nssv1816640,nssv1816607 M 97 10 0 CR1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4232 1 205756245 205827755 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4934,nssv6098,nssv9390,nssv9670,nssv3695,nssv453,nssv2681,nssv11178 M 9 0 8 CR1 NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA19129,NA19240 nsv821188 1 205762356 205821816 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420924 M 1 0 1 CR1 NA10851 nsv826476 1 205762356 205821816 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434904,nssv1438623,nssv1427303,nssv1437264,nssv1432532,nssv1423173,nssv1440170,nssv1429604,nssv1440861,nssv1422412,nssv1421501,nssv1423852,nssv1424003,nssv1430390,nssv1425549,nssv1433465,nssv1436382,nssv1424789,nssv1428068,nssv1431121,nssv1428865,nssv1439502,nssv1437986,nssv1435693,nssv1438007,nssv1426436,nssv1435074,nssv1434217,nssv1431865 M 31 0 29 CR1 AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 esv26263 1 205763104 205821509 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11404,esv19203,esv20307 M 40 15 4 CR1 NA06985,NA07037,NA11931,NA11995,NA12006,NA12239,NA12287,NA12489,NA12749,NA12878,NA18502,NA18511,NA18523,NA18858,NA18909,NA19099,NA19190,NA19225,NA19257 esv3891082 1 205763340 206019867 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779440 M 3017 0 1 CD46,CR1,CR1L nsv946622 1 205763424 205820828 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816687,nssv1816701,nssv1814748,nssv1814739,nssv1816676,nssv1814741,nssv1816698,nssv1816694,nssv1814750,nssv1814740,nssv1816686,nssv1814722,nssv1816688,nssv1814757,nssv1816670,nssv1816710,nssv1816679,nssv1814760,nssv1816678,nssv1814754,nssv1816699,nssv1816712,nssv1814744,nssv1816706,nssv1816674,nssv1816700,nssv1816680,nssv1814735,nssv1816675,nssv1816707,nssv1814752,nssv1814731,nssv1816671,nssv1814726,nssv1816696,nssv1814743,nssv1814747,nssv1814758,nssv1814745,nssv1816709,nssv1816685,nssv1814718,nssv1816681,nssv1814724,nssv1816684,nssv1814736,nssv1816689,nssv1814763,nssv1816672,nssv1814730,nssv1816669,nssv1814755,nssv1816692,nssv1814762,nssv1814749,nssv1814725,nssv1816691,nssv1814734,nssv1814751,nssv1814727,nssv1816695,nssv1814721,nssv1814753,nssv1816713,nssv1814746,nssv1816690,nssv1816668,nssv1814728,nssv1816673,nssv1814759,nssv1816682,nssv1816703,nssv1816677,nssv1816697,nssv1816683,nssv1816705,nssv1814717,nssv1814756,nssv1816715,nssv1814732,nssv1816704,nssv1814761,nssv1816714,nssv1816667,nssv1814737,nssv1814723,nssv1814729,nssv1814716,nssv1814733,nssv1814719,nssv1816702,nssv1816711,nssv1814738,nssv1816693,nssv1814720,nssv1814742,nssv1816708 M 97 10 0 CR1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv124 1 205763497 205805949 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv124 M 1 0 1 CR1 NA15510 nsv8724 1 205763538 205818327 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv23068,nssv24292,nssv23385,nssv23373 M 31 3 1 CR1 NA11830,NA18502,NA18572,NA18860 nsv471426 1 205763569 205818230 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548256,nssv548278,nssv548267 M 3 3 0 CR1 JDW,NA18507,YH nsv514918 1 205765328 205810208 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2854858,nssv2854846,nssv2854855,nssv2854847,nssv2854877,nssv2855746,nssv2854867,nssv2854848,nssv2854859,nssv2854743,nssv2854874,nssv2855587,nssv2854866,nssv2854808,nssv2854863,nssv2855621,nssv2854876,nssv2854849,nssv2854852,nssv2855755,nssv2854872,nssv2855673,nssv2854873,nssv2855592,nssv2854892,nssv2853658,nssv2854885,nssv2855730,nssv2854883,nssv2855618,nssv2854893,nssv2855765,nssv2854891,nssv2854775,nssv2854895,nssv2854810,nssv2854878,nssv2855604,nssv2854856,nssv2855732,nssv2854868,nssv2855643,nssv2854851,nssv2855699,nssv2854886,nssv2855573,nssv2854869,nssv2854754,nssv2854862,nssv2853593,nssv2854880,nssv2855579,nssv2854875,nssv2855756,nssv2854870,nssv2855719,nssv2854884,nssv2855606,nssv2854865,nssv2853651,nssv2854857,nssv2853644,nssv2854853,nssv2855518,nssv2854871,nssv2854753,nssv2854887,nssv2854798,nssv2854854,nssv2855584,nssv2854860,nssv2855712,nssv2854879,nssv2854750,nssv2854888,nssv2853600,nssv2854864,nssv2855605,nssv2854861,nssv2853605,nssv2854889,nssv2855576,nssv2854894,nssv2853630,nssv2854882,nssv2854814,nssv2854881,nssv2853622,nssv2854890,nssv2855731,nssv2855671,nssv2854832,nssv2855762,nssv2855644,nssv2853641,nssv2855710,nssv2853635,nssv2854765,nssv2854764,nssv2855646,nssv2854815,nssv2855529,nssv2854834,nssv2855660,nssv2855752,nssv2855561,nssv2855547,nssv2855536,nssv2853617,nssv2855678,nssv2855589,nssv2855666,nssv2855769,nssv2855652,nssv2855617,nssv2853612,nssv2855639,nssv2855519,nssv2855675,nssv2855591,nssv2853596,nssv2855737,nssv2853632,nssv2855628,nssv2855682,nssv2853657,nssv2855722,nssv2855685,nssv2853602,nssv2855527,nssv2854746,nssv2855688,nssv2854763,nssv2855516,nssv2855554,nssv2855687,nssv2854773,nssv2855613,nssv2855636,nssv2855700,nssv2855753,nssv2853645,nssv2855727,nssv2854801,nssv2855612,nssv2854803,nssv2854777,nssv2854788,nssv2853623,nssv2855521,nssv2855724,nssv2854790,nssv2854785,nssv2855708,nssv2855661,nssv2855551,nssv2855766,nssv2855680,nssv2853614,nssv2854778,nssv2855707,nssv2855735,nssv2855555,nssv2854794,nssv2855749,nssv2854782,nssv2853633,nssv2855523,nssv2854770,nssv2855568,nssv2854792,nssv2855739,nssv2855616,nssv2855683,nssv2855540,nssv2853616,nssv2854799,nssv2855524,nssv2853652,nssv2855734,nssv2855601,nssv2855608,nssv2855744,nssv2855620,nssv2855693,nssv2855672,nssv2855665,nssv2854816,nssv2855586,nssv2855515,nssv2855743,nssv2855759,nssv2853638,nssv2855614,nssv2855768,nssv2855583,nssv2855624,nssv2853608,nssv2855570,nssv2855647,nssv2855648,nssv2855594,nssv2854755,nssv2853595,nssv2855560,nssv2854828,nssv2855545,nssv2853649,nssv2855721,nssv2853626,nssv2853637,nssv2854774,nssv2853659,nssv2855582,nssv2855770,nssv2855569,nssv2853653,nssv2855538,nssv2854838,nssv2855593,nssv2855637,nssv2854749,nssv2855532,nssv2855565,nssv2855694,nssv2855638,nssv2855726,nssv2855742,nssv2855703,nssv2853643,nssv2855659,nssv2855510,nssv2854813,nssv2855751,nssv2854819,nssv2855590,nssv2855771,nssv2854771,nssv2854827,nssv2853628,nssv2854833,nssv2855767,nssv2855748,nssv2854787,nssv2854836,nssv2855674,nssv2855701,nssv2855558,nssv2854796,nssv2853607,nssv2853636,nssv2855557,nssv2854769,nssv2855733,nssv2855704,nssv2855631,nssv2855559,nssv2855686,nssv2853650,nssv2854829,nssv2855738,nssv2855697,nssv2853631,nssv2855520,nssv2853656,nssv2854806,nssv2853639,nssv2855650,nssv2855747,nssv2853594,nssv2853640,nssv2855654,nssv2854791,nssv2855526,nssv2855525,nssv2855597,nssv2855556,nssv2854748,nssv2855548,nssv2855611,nssv2854817,nssv2855760,nssv2854779,nssv2853660,nssv2853613,nssv2855509,nssv2855578,nssv2855717,nssv2853598,nssv2853615,nssv2855684,nssv2853604,nssv2853655,nssv2855750,nssv2855667,nssv2855741,nssv2855598,nssv2855541,nssv2855692,nssv2854841,nssv2854809,nssv2854760,nssv2855508,nssv2854843,nssv2853618,nssv2855772,nssv2854757,nssv2854822,nssv2854845,nssv2855609,nssv2855610,nssv2855714,nssv2855511,nssv2854830,nssv2855531,nssv2854766,nssv2855656,nssv2855645,nssv2855574,nssv2854837,nssv2855522,nssv2855534,nssv2855670,nssv2855633,nssv2855702,nssv2853599,nssv2855640,nssv2855596,nssv2854789,nssv2855663,nssv2855600,nssv2853647,nssv2853620,nssv2855669,nssv2855764,nssv2853646,nssv2855543,nssv2854780,nssv2855566,nssv2854784,nssv2853642,nssv2853603,nssv2855634,nssv2854802,nssv2855681,nssv2854768,nssv2855580,nssv2855657,nssv2855679,nssv2855715,nssv2853621,nssv2853648,nssv2854800,nssv2855564,nssv2855514,nssv2855758,nssv2855725,nssv2855649,nssv2855542,nssv2855695,nssv2855728,nssv2854831,nssv2855550,nssv2855668,nssv2855729,nssv2853625,nssv2855552,nssv2855623,nssv2855629,nssv2853610,nssv2855676,nssv2855642,nssv2854747,nssv2855577,nssv2855567,nssv2855533,nssv2855615,nssv2855651,nssv2854761,nssv2853601,nssv2854793,nssv2855622,nssv2855619,nssv2855572,nssv2853611,nssv2854839,nssv2854805,nssv2854767,nssv2855575,nssv2854825,nssv2854821,nssv2854772,nssv2854797,nssv2854844,nssv2855506,nssv2853597,nssv2853609,nssv2855763,nssv2855691,nssv2855546,nssv2854783,nssv2855626,nssv2855698,nssv2855549,nssv2854826,nssv2853634,nssv2855635,nssv2855677,nssv2854756,nssv2855528,nssv2855530,nssv2855723,nssv2855757,nssv2854824,nssv2854745,nssv2853624,nssv2853627,nssv2854807,nssv2855709,nssv2854751,nssv2855581,nssv2854840,nssv2855625,nssv2855544,nssv2855539,nssv2855689,nssv2855507,nssv2854762,nssv2855627,nssv2855716,nssv2854811,nssv2854823,nssv2855705,nssv2855588,nssv2855658,nssv2855512,nssv2855517,nssv2855632,nssv2855745,nssv2855718,nssv2855630,nssv2855754,nssv2854850,nssv2855585,nssv2853629,nssv2855761,nssv2854776,nssv2855736,nssv2855740,nssv2855662,nssv2855537,nssv2855653,nssv2854842,nssv2855595,nssv2855696,nssv2855713,nssv2854781,nssv2855571,nssv2854812,nssv2855603,nssv2855562,nssv2854744,nssv2855706,nssv2855513,nssv2854752,nssv2855711,nssv2854804,nssv2853619,nssv2854759,nssv2853606,nssv2855553,nssv2854758,nssv2854795,nssv2854786,nssv2854820,nssv2855599,nssv2855655,nssv2853654,nssv2855664,nssv2855607,nssv2855563,nssv2855535,nssv2855720,nssv2854818,nssv2855641,nssv2855602,nssv2854835,nssv2855690 M 2366 488 0 CR1 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv549086 1 205769476 205801279 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736021 M 17421 0 1 CR1 dgv5n47 1 205774501 205812328 CNV loss Kidd_et_al_2010b 21111241 Sequencing nsv498705,nsv498706 M 9 0 2 CR1 dgv793n54 1 205782722 205808067 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549088,nsv549087 M 17421 0 2 CR1 dgv6n47 1 205785379 205804283 CNV loss Kidd_et_al_2010b 21111241 Sequencing nsv498708,nsv498707 M 9 0 2 CR1 nsv436034 1 205792717 205806736 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465874 M 2 1 0 CR1 NA15510 esv33009 1 205803247 205814725 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93993,essv97688,essv100774 M 51 1 2 CR1 21656,21802,22278 dgv794n54 1 205805750 205814607 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549092,nsv549091,nsv549089 M 17421 0 3 CR1 nsv549090 1 205806938 205808067 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736025 M 17421 0 1 CR1 nsv514919 1 205813296 205815968 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2854909,nssv2854898,nssv2854900,nssv2854907,nssv2854896,nssv2854902,nssv2854904,nssv2854901,nssv2854899,nssv2854908,nssv2854897,nssv2854906,nssv2854903,nssv2854905 M 2366 12 2 CR1 NA11994,NA12239,NA12286,NA18594,NA19107,NA19121,NA19123,NA19131,NA19141,NA19193,NA19225,NA19239,NA21366,NA21442 nsv946623 1 205856506 205857006 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815463,nssv1815440,nssv1814778,nssv1814764,nssv1815461,nssv1815437,nssv1814766,nssv1814800,nssv1814768,nssv1815436,nssv1814795,nssv1815443,nssv1814775,nssv1814804,nssv1814783,nssv1815428,nssv1815462,nssv1814802,nssv1814774,nssv1815444,nssv1815466,nssv1815456,nssv1814793,nssv1815476,nssv1814786,nssv1815447,nssv1814772,nssv1815473,nssv1815457,nssv1815449,nssv1814782,nssv1814791,nssv1815458,nssv1815469,nssv1814770,nssv1815422,nssv1814788,nssv1815441,nssv1815460,nssv1815431,nssv1814781,nssv1815471,nssv1814769,nssv1815430,nssv1815459,nssv1814801,nssv1814777,nssv1815425,nssv1814789,nssv1814799,nssv1814776,nssv1814798,nssv1814773,nssv1815434,nssv1815465,nssv1815429,nssv1814765,nssv1815426,nssv1814792,nssv1814794,nssv1814771,nssv1815451,nssv1814785,nssv1815474,nssv1814767,nssv1814787,nssv1814784,nssv1814805,nssv1815464,nssv1815475,nssv1814779,nssv1815452,nssv1814780,nssv1815468,nssv1814796,nssv1815438,nssv1815423,nssv1814790,nssv1815450,nssv1815433,nssv1815455,nssv1815442,nssv1815446,nssv1815472,nssv1815445,nssv1814797,nssv1815448,nssv1815454,nssv1815432,nssv1815453,nssv1815439,nssv1814803,nssv1815424,nssv1815427,nssv1815435,nssv1815470,nssv1815467 M 97 10 0 CR1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv826487 1 205880935 205881576 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1435185 M 31 1 0 CR1 NA18592 nsv8735 1 205888316 205895072 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25712,nssv24585,nssv21759,nssv22425 M 31 4 0 CR1L NA12740,NA18537,NA18563,NA18975 nsv8746 1 205906876 205914498 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv27747,nssv26857,nssv23378,nssv20420,nssv24582 M 31 0 5 CR1L NA18502,NA18517,NA18853,NA18860,NA19221 esv25546 1 205907825 205912404 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11321 M 40 0 3 CR1L NA18502,NA18517,NA19099 nsv945269 1 205916069 205952751 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815506,nssv1815522,nssv1815508,nssv1815521,nssv1815558,nssv1815504,nssv1815487,nssv1815570,nssv1815561,nssv1815516,nssv1815497,nssv1815551,nssv1815496,nssv1815502,nssv1815563,nssv1815519,nssv1815560,nssv1815564,nssv1815491,nssv1815524,nssv1815499,nssv1815545,nssv1815495,nssv1815511,nssv1815494,nssv1815515,nssv1815492,nssv1815477,nssv1815556,nssv1815544,nssv1815505,nssv1815546,nssv1815482,nssv1815553,nssv1815485,nssv1815513,nssv1815501,nssv1815540,nssv1815481,nssv1815567,nssv1815478,nssv1815541,nssv1815489,nssv1815573,nssv1815486,nssv1815533,nssv1815480,nssv1815509,nssv1815479,nssv1815538,nssv1815559,nssv1815500,nssv1815554,nssv1815512,nssv1815490,nssv1815507,nssv1815484,nssv1815528,nssv1815555,nssv1815514,nssv1815483,nssv1815525,nssv1815488,nssv1815537,nssv1815562,nssv1815568,nssv1815498,nssv1815532,nssv1815557,nssv1815549,nssv1815493,nssv1815547,nssv1815534,nssv1815566,nssv1815550,nssv1815527,nssv1815503,nssv1815510,nssv1815531,nssv1815543,nssv1815571,nssv1815520,nssv1815548,nssv1815529,nssv1815542,nssv1815572,nssv1815518,nssv1815565,nssv1815539,nssv1815523,nssv1815526,nssv1815535,nssv1815530,nssv1815517,nssv1815536,nssv1815569,nssv1815552 M 97 10 0 CR1L HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv27524 1 205925624 205926319 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19792 M 40 0 1 CR1L NA18909 nsv8757 1 205938138 205940575 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv23683 M 31 1 0 CR1L NA11830 nsv549093 1 206023182 206034363 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736028 M 17421 0 1 CD46 esv2127231 1 206086601 206086983 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4868960 M 1 0 1 "" NA18507 nsv4243 1 206102175 206134545 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv464 M 9 1 0 CD34 NA19240 nsv1002076 1 206103132 206140812 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705499 M 29084 1 0 CD34 nsv999483 1 206156641 206180354 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500285 M 29084 0 1 "" esv3329461 1 206175443 206175443 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740948 M 185 1 0 "" NA19240 nsv4254 1 206188079 206232793 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8005 M 9 0 1 "" NA12156 nsv945270 1 206197624 206198124 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815605,nssv1815633,nssv1815655,nssv1815638,nssv1815653,nssv1815670,nssv1815587,nssv1815629,nssv1815603,nssv1815627,nssv1815658,nssv1815649,nssv1815575,nssv1815631,nssv1815585,nssv1815648,nssv1815593,nssv1815632,nssv1815577,nssv1815618,nssv1815578,nssv1815666,nssv1815588,nssv1815642,nssv1815582,nssv1815661,nssv1815589,nssv1815597,nssv1815592,nssv1815647,nssv1815657,nssv1815626,nssv1815596,nssv1815621,nssv1815579,nssv1815641,nssv1815594,nssv1815574,nssv1815591,nssv1815601,nssv1815595,nssv1815637,nssv1815660,nssv1815610,nssv1815576,nssv1815630,nssv1815598,nssv1815643,nssv1815586,nssv1815650,nssv1815583,nssv1815612,nssv1815584,nssv1815665,nssv1815602,nssv1815614,nssv1815590,nssv1815608,nssv1815659,nssv1815623,nssv1815581,nssv1815635,nssv1815652,nssv1815619,nssv1815580,nssv1815634,nssv1815654,nssv1815606,nssv1815656,nssv1815599,nssv1815651,nssv1815607,nssv1815628,nssv1815663,nssv1815625,nssv1815609,nssv1815611,nssv1815667,nssv1815624,nssv1815604,nssv1815664,nssv1815613,nssv1815616,nssv1815622,nssv1815600,nssv1815640,nssv1815620,nssv1815668,nssv1815617,nssv1815645,nssv1815644,nssv1815669,nssv1815662,nssv1815646,nssv1815639,nssv1815636,nssv1815615 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4265 1 206202118 206247709 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2759,nssv6108 M 9 2 0 "" NA12156,NA18555 nsv477883 1 206286099 206286099 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018973 M 9 1 0 PLXNA2 NA18517 nsv4276 1 206299457 206323920 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3704 M 9 1 0 PLXNA2 NA12878 esv3447338 1 206330595 206330614 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597958 M 185 1 0 PLXNA2 NA12045 nsv4287 1 206343961 206376945 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv475 M 9 1 0 PLXNA2 NA19240 nsv832437 1 206365584 206526445 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441646,nssv1441647,nssv1441645 M 95 1 2 PLXNA2 nsv470778 1 206387741 206398272 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544413 M 443 0 1 PLXNA2 HGDP00716 nsv479347 1 206452938 206452938 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013847 M 9 0 0 PLXNA2 esv28439 1 206483039 206484784 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9916 M 40 0 1 PLXNA2 NA12156 dgv565n100 1 206488099 206524796 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007364,nsv1008372 M 29084 2 0 "" dgv14e55 1 206492331 206521802 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750826,esv2750827 M 771 5 0 "" BEC_494,BEC_520 dgv566n100 1 206502637 206524945 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003097,nsv1006892,nsv1001251,nsv999026,nsv1010984 M 29084 20 0 "" nsv549094 1 206505588 206524543 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736029 M 17421 1 0 "" nsv1013230 1 206505595 206518382 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705500,nssv3492010 M 29084 2 0 "" esv2763714 1 206505607 206524945 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005323,essv7005367,essv7005289,essv7005356,essv7005334,essv7005345,essv7005312,essv7005301 M 1109 8 0 "" SW_0165,SW_0505,SW_0805,SW_1070,SW_1244,SW_1277,SW_1419,SW_1539 dgv15e55 1 206510145 206521802 CNV gain Pinto_et_al_2007 17911159 SNP array esv34329,esv2750828 M 771 5 0 "" NA12146,SPC_18 esv2758994 1 206510145 206563741 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756882 M 270 2 0 "" NA07357,NA12146 dgv567n100 1 206512331 206524945 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998720,nsv1011908,nsv999764,nsv1010404,nsv1008535 M 29084 15 0 "" nsv818789 1 206512423 206523545 CNV gain Wang_et_al_2007 17921354 SNP array nssv1418343 M 112 1 0 "" NA12146 nsv522684 1 206577428 206580351 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv706093 M 2026 0 1 "" esv3415611 1 206583979 206583998 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597969 M 185 1 0 "" NA19143 nsv832448 1 206602034 206791859 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441648 M 95 1 0 "" nsv549095 1 206605454 207185409 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736030 M 17421 1 0 "" nsv549096 1 206712713 206748442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736031 M 17421 0 1 "" esv3891093 1 206712713 207184923 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25792404 M 3017 1 0 "" nsv506976 1 206756166 206762166 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617548 M 4 0 0 "" CHM nsv472813 1 206825619 206825619 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015928 M 9 1 0 "" NA18555 esv3304245 1 206829425 206829426 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7797395,essv7777123 M 185 2 0 "" NA11918,NA11992 esv3369774 1 206829426 206829445 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9597991 M 185 1 0 "" NA11918 esv3402724 1 206829427 206829453 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902863,essv8902864 M 185 2 0 "" NA11918,NA11992 nsv7189 1 206840755 206884716 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6116 M 9 0 0 "" NA12156 nsv549097 1 206848109 207048947 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736032 M 17421 1 0 "" nsv832459 1 206883653 207054953 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441649 M 95 1 0 "" nsv945271 1 206932763 206955404 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815888,nssv1815724,nssv1815702,nssv1815719,nssv1815692,nssv1815898,nssv1815675,nssv1815892,nssv1815883,nssv1815726,nssv1815673,nssv1815864,nssv1815677,nssv1815890,nssv1815881,nssv1815728,nssv1815680,nssv1815874,nssv1815690,nssv1815897,nssv1815879,nssv1815729,nssv1815684,nssv1815720,nssv1815681,nssv1815868,nssv1815676,nssv1815873,nssv1815674,nssv1815872,nssv1815679,nssv1815861,nssv1815685,nssv1815867,nssv1815885,nssv1815723,nssv1815887,nssv1815718,nssv1815882,nssv1815876,nssv1815686,nssv1815877,nssv1815884,nssv1815698,nssv1815689,nssv1815671,nssv1815693,nssv1815889,nssv1815688,nssv1815894,nssv1815695,nssv1815715,nssv1815682,nssv1815709,nssv1815699,nssv1815727,nssv1815678,nssv1815712,nssv1815700,nssv1815703,nssv1815683,nssv1815893,nssv1815691,nssv1815722,nssv1815672,nssv1815870,nssv1815886,nssv1815707,nssv1815687,nssv1815865,nssv1815880,nssv1815895,nssv1815716,nssv1815878,nssv1815708,nssv1815694,nssv1815711,nssv1815896,nssv1815871,nssv1815866,nssv1815869,nssv1815710,nssv1815714,nssv1815697,nssv1815706,nssv1815701,nssv1815696,nssv1815725,nssv1815875,nssv1815713,nssv1815863,nssv1815862,nssv1815704,nssv1815705,nssv1815891,nssv1815721,nssv1815717 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3433790 1 206944652 206946250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692112 M 185 1 0 "" NA19238 nsv832470 1 207065001 207205914 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441650 M 95 1 0 "" nsv477523 1 207099393 207099393 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017270 M 9 1 0 "" NA18517 nsv4299 1 207138762 207169193 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10460 M 9 1 0 "" NA18956 dgv568n100 1 207143895 207203442 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000999,nsv1007896,nsv999126,nsv1013499 M 29084 4 0 "" nsv1008249 1 207161152 207190475 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495778 M 29084 1 0 "" dgv569n100 1 207172589 207233178 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013286,nsv1000624 M 29084 2 0 "" nsv438137 1 207188300 207192596 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469818,nssv469907,nssv469874,nssv469840,nssv469807,nssv469885,nssv469829,nssv469929,nssv469785,nssv469896,nssv469796,nssv469918,nssv469863,nssv469852 M 269 0 13 "" NA06991,NA06993,NA10851,NA10857,NA10861,NA10863,NA11995,NA12044,NA12056,NA12234,NA12264,NA12740,NA12751 nsv1006716 1 207328275 207352405 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491613 M 29084 1 0 "" nsv522816 1 207391661 207409245 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698463 M 2026 0 1 "" dgv6n68 1 207437899 207655935 CNV loss Wong_et_al_2007 17160897 BAC aCGH nsv832481,nsv832492 M 95 0 2 "" nsv4310 1 207455627 207488303 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6123 M 9 1 0 "" NA12156 nsv475856 1 207464531 207464531 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015954 M 9 1 0 "" NA12878 nsv945272 1 207472654 207474190 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1815930,nssv1815961,nssv1815905,nssv1815972,nssv1815920,nssv1815944,nssv1815919,nssv1815950,nssv1814029,nssv1815940,nssv1815912,nssv1815929,nssv1815978,nssv1815953,nssv1815918,nssv1815925,nssv1815914,nssv1815933,nssv1815902,nssv1814033,nssv1815903,nssv1815941,nssv1814028,nssv1815932,nssv1814031,nssv1815945,nssv1815979,nssv1815964,nssv1815907,nssv1815971,nssv1815913,nssv1815965,nssv1815910,nssv1815942,nssv1815976,nssv1815938,nssv1815921,nssv1814034,nssv1814032,nssv1815970,nssv1815917,nssv1815956,nssv1815916,nssv1814036,nssv1815928,nssv1815939,nssv1815900,nssv1815949,nssv1815901,nssv1815952,nssv1815908,nssv1815948,nssv1815923,nssv1815969,nssv1815904,nssv1815958,nssv1814030,nssv1814037,nssv1814027,nssv1815957,nssv1815927,nssv1814038,nssv1815977,nssv1815934,nssv1815906,nssv1815926,nssv1815909,nssv1815947,nssv1815915,nssv1815973,nssv1815911,nssv1814041,nssv1815974,nssv1815954,nssv1815967,nssv1815899,nssv1815951,nssv1815931,nssv1815962,nssv1815937,nssv1814040,nssv1815946,nssv1815943,nssv1814042,nssv1814035,nssv1815963,nssv1815966,nssv1815935,nssv1814039,nssv1815960,nssv1815924,nssv1815922,nssv1815936,nssv1815959,nssv1815975,nssv1815955,nssv1815968 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1008555 1 207476200 207483119 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565638 M 3 0 1 "" HuRef esv3306533 1 207605373 207605374 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768365 M 185 1 0 "" NA12872 esv3380843 1 207605379 207605398 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598003 M 185 1 0 "" NA12872 esv3415563 1 207659968 207659987 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598014 M 185 1 0 "" NA11931 esv3398582 1 207687093 207687114 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863810 M 185 1 0 "" NA12005 nsv4321 1 207688424 207695033 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8033 M 9 0 1 "" NA12156 nsv473796 1 207698851 207698851 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015571 M 9 1 0 "" NA12156 esv29558 1 207698994 207699697 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17828 M 40 0 9 "" NA18505,NA18517,NA18523,NA18861,NA19099,NA19108,NA19129,NA19190,NA19257 nsv4332 1 207779437 207813110 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2763 M 9 1 0 "" NA18555 nsv478773 1 207806698 207806698 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018514 M 9 1 0 "" NA18507 esv2762140 1 207882954 207896970 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005378 M 1109 0 1 LAMB3 SW_1482 nsv1004343 1 207945927 207976008 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487904 M 29084 1 0 HSD11B1 nsv525445 1 207951941 207979216 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701573 M 2026 0 1 HSD11B1 nsv1006632 1 207952825 208036978 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705507 M 29084 1 0 C1orf74,HSD11B1,IRF6,TRAF3IP3 nsv478363 1 207963713 207963713 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019091 M 9 1 0 HSD11B1 NA18507 nsv1001588 1 207975499 208004866 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500921 M 29084 1 0 TRAF3IP3 nsv4343 1 207996555 208041500 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8043 M 9 0 1 C1orf74,IRF6,TRAF3IP3 NA12156 nsv159698 1 208001959 208002699 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178276 M 24 TRAF3IP3 esv3449118 1 208010152 208012350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692115 M 185 1 0 TRAF3IP3 NA19240 esv3393757 1 208010752 208012050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692116 M 185 1 0 TRAF3IP3 NA19238 esv2491231 1 208011281 208011470 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5241723 M 1 0 1 TRAF3IP3 NA18507 nsv945273 1 208024875 208026659 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814074,nssv1814091,nssv1814065,nssv1814075,nssv1814056,nssv1814139,nssv1814128,nssv1814096,nssv1814125,nssv1814105,nssv1814046,nssv1814084,nssv1814047,nssv1814092,nssv1814052,nssv1814080,nssv1814062,nssv1814099,nssv1814049,nssv1814114,nssv1814124,nssv1814086,nssv1814072,nssv1814095,nssv1814063,nssv1814089,nssv1814120,nssv1814111,nssv1814064,nssv1814098,nssv1814045,nssv1814118,nssv1814051,nssv1814130,nssv1814122,nssv1814108,nssv1814061,nssv1814101,nssv1814067,nssv1814078,nssv1814060,nssv1814109,nssv1814126,nssv1814113,nssv1814048,nssv1814115,nssv1814050,nssv1814117,nssv1814129,nssv1814077,nssv1814054,nssv1814043,nssv1814055,nssv1814090,nssv1814058,nssv1814131,nssv1814057,nssv1814083,nssv1814071,nssv1814136,nssv1814127,nssv1814133,nssv1814053,nssv1814087,nssv1814059,nssv1814076,nssv1814123,nssv1814073,nssv1814121,nssv1814088,nssv1814044,nssv1814134,nssv1814116,nssv1814100,nssv1814082,nssv1814119,nssv1814066,nssv1814094,nssv1814070,nssv1814097,nssv1814107,nssv1814106,nssv1814110,nssv1814081,nssv1814102,nssv1814093,nssv1814104,nssv1814068,nssv1814085,nssv1814138,nssv1814137,nssv1814112,nssv1814069,nssv1814135,nssv1814079,nssv1814103,nssv1814132 M 97 10 0 IRF6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4354 1 208137197 208167406 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9397,nssv9676,nssv10467,nssv4940,nssv1685 M 9 0 5 "" NA18507,NA18517,NA18555,NA18956,NA19129 nsv826498 1 208142550 208152759 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1421502,nssv1423175,nssv1434905,nssv1429605,nssv1440171,nssv1440862,nssv1424790,nssv1438018,nssv1437987,nssv1425550,nssv1433466,nssv1436383,nssv1431122,nssv1430391,nssv1435694,nssv1422413 M 31 0 16 "" AK14,AK16,AK18,AK2,AK4,NA18526,NA18542,NA18547,NA18552,NA18564,NA18566,NA18942,NA18951,NA18969,NA18997,NA18999 esv2481942 1 208143127 208160461 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5165590 M 1 0 1 "" NA18507 esv2524131 1 208143646 208152866 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5190096 M 1 0 1 "" NA18507 nsv436646 1 208143946 208152620 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465875 M 2 0 1 "" NA18505 nsv820382 1 208144233 208152759 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420935 M 1 0 1 "" NA10851 esv1002272 1 208144266 208159912 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565226 M 3 0 1 "" HuRef esv9127 1 208144437 208152798 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31568 M 1 0 0 "" esv2283783 1 208144493 208152787 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4868425 M 1 0 1 "" NA18507 esv28232 1 208144616 208152585 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv9854 M 40 7 12 "" NA06985,NA11894,NA11993,NA12004,NA12239,NA12287,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18523,NA18909,NA19099,NA19108,NA19225,NA19240,NA19257 nsv826509 1 208144638 208150343 CNV gain+loss Park_et_al_2010 20364138 Oligo aCGH nssv1432543,nssv1424495,nssv1434218,nssv1439503,nssv1424004,nssv1437265 M 31 1 5 "" NA18537,NA18570,NA18582,NA18947,NA18949,NA18972 nsv514039 1 208144656 208152816 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857690,nssv2855124,nssv2857748,nssv2855125,nssv2857666,nssv2854915,nssv2857792,nssv2855036,nssv2857663,nssv2855126,nssv2857786,nssv2854972,nssv2857650,nssv2855028,nssv2857681,nssv2855003,nssv2857661,nssv2855105,nssv2857742,nssv2854913,nssv2855134,nssv2855114,nssv2857637,nssv2855024,nssv2857789,nssv2855092,nssv2857655,nssv2855022,nssv2857743,nssv2855064,nssv2857773,nssv2855042,nssv2857654,nssv2855013,nssv2857677,nssv2855012,nssv2857772,nssv2854919,nssv2857641,nssv2855038,nssv2857715,nssv2854917,nssv2857775,nssv2855017,nssv2857684,nssv2854983,nssv2857703,nssv2854969,nssv2857766,nssv2855039,nssv2857714,nssv2855087,nssv2857759,nssv2855050,nssv2857695,nssv2854920,nssv2857744,nssv2855090,nssv2855131,nssv2854923,nssv2855128,nssv2855122,nssv2857691,nssv2855025,nssv2857644,nssv2854922,nssv2857768,nssv2855101,nssv2857735,nssv2855062,nssv2857648,nssv2855111,nssv2857777,nssv2855097,nssv2857686,nssv2854975,nssv2857784,nssv2855074,nssv2857679,nssv2855033,nssv2857673,nssv2854996,nssv2857712,nssv2854990,nssv2857779,nssv2855085,nssv2857738,nssv2855108,nssv2857741,nssv2854931,nssv2857685,nssv2855084,nssv2857624,nssv2855123,nssv2857618,nssv2854912,nssv2857782,nssv2854993,nssv2857734,nssv2854980,nssv2857687,nssv2855079,nssv2857727,nssv2855045,nssv2857719,nssv2854971,nssv2857776,nssv2855073,nssv2857634,nssv2854945,nssv2857795,nssv2855116,nssv2857780,nssv2854957,nssv2857754,nssv2854958,nssv2857771,nssv2855118,nssv2857647,nssv2854938,nssv2857676,nssv2854926,nssv2857745,nssv2854936,nssv2857669,nssv2854932,nssv2857678,nssv2855121,nssv2857694,nssv2854935,nssv2857622,nssv2855032,nssv2857652,nssv2855100,nssv2857658,nssv2855020,nssv2857761,nssv2854974,nssv2857688,nssv2855093,nssv2857705,nssv2854967,nssv2857693,nssv2855030,nssv2857633,nssv2854997,nssv2857783,nssv2855119,nssv2857656,nssv2855004,nssv2857785,nssv2854982,nssv2857704,nssv2854939,nssv2857767,nssv2855058,nssv2857662,nssv2855029,nssv2857720,nssv2854988,nssv2857790,nssv2855109,nssv2857639,nssv2854961,nssv2857674,nssv2855115,nssv2857716,nssv2854977,nssv2857746,nssv2854970,nssv2857699,nssv2854976,nssv2855133,nssv2854949,nssv2857645,nssv2855071,nssv2857763,nssv2855099,nssv2857778,nssv2855000,nssv2857751,nssv2855046,nssv2857657,nssv2855021,nssv2857707,nssv2854911,nssv2857710,nssv2854933,nssv2857781,nssv2855127,nssv2857640,nssv2854995,nssv2857739,nssv2854928,nssv2857700,nssv2855043,nssv2857671,nssv2854940,nssv2857787,nssv2854924,nssv2857680,nssv2855072,nssv2857729,nssv2855086,nssv2855132,nssv2855076,nssv2857701,nssv2854999,nssv2857632,nssv2855031,nssv2857765,nssv2855104,nssv2857631,nssv2855091,nssv2857683,nssv2855005,nssv2857682,nssv2855061,nssv2857796,nssv2855035,nssv2857659,nssv2855023,nssv2857653,nssv2854962,nssv2857628,nssv2855008,nssv2857769,nssv2854929,nssv2857726,nssv2855001,nssv2857760,nssv2854918,nssv2857625,nssv2854960,nssv2857627,nssv2854959,nssv2857670,nssv2855048,nssv2857736,nssv2854987,nssv2857747,nssv2854965,nssv2857621,nssv2855016,nssv2857756,nssv2855057,nssv2857737,nssv2855044,nssv2857651,nssv2855041,nssv2857750,nssv2855063,nssv2857626,nssv2854948,nssv2855129,nssv2854984,nssv2855136,nssv2855102,nssv2857733,nssv2854986,nssv2857635,nssv2854950,nssv2857709,nssv2854942,nssv2857623,nssv2854943,nssv2857758,nssv2855110,nssv2857698,nssv2854989,nssv2857753,nssv2855081,nssv2857788,nssv2854953,nssv2857770,nssv2855077,nssv2857708,nssv2855034,nssv2857731,nssv2854968,nssv2857702,nssv2855066,nssv2857713,nssv2854927,nssv2857620,nssv2855120,nssv2857757,nssv2855107,nssv2857646,nssv2855112,nssv2857732,nssv2854934,nssv2857692,nssv2855011,nssv2857764,nssv2854991,nssv2857696,nssv2854994,nssv2857711,nssv2855098,nssv2857791,nssv2854930,nssv2857668,nssv2854963,nssv2857724,nssv2855009,nssv2857697,nssv2854914,nssv2857665,nssv2854985,nssv2857774,nssv2855117,nssv2857730,nssv2855069,nssv2855135,nssv2855026,nssv2857675,nssv2855070,nssv2857664,nssv2854947,nssv2857629,nssv2855007,nssv2855130,nssv2855040,nssv2857740,nssv2854941,nssv2857717,nssv2855047,nssv2857723,nssv2854937,nssv2857638,nssv2854981,nssv2857749,nssv2854955,nssv2857630,nssv2855080,nssv2857718,nssv2854951,nssv2857706,nssv2855019,nssv2857794,nssv2855051,nssv2857667,nssv2854916,nssv2857643,nssv2855082,nssv2857722,nssv2854973,nssv2857762,nssv2854992,nssv2857619,nssv2855094,nssv2857649,nssv2854946,nssv2857728,nssv2855088,nssv2857636,nssv2855103,nssv2857725,nssv2854966,nssv2857642,nssv2855027,nssv2857721,nssv2855106,nssv2857660,nssv2855095,nssv2857672,nssv2854956,nssv2857755,nssv2854998,nssv2857689,nssv2855065,nssv2857793,nssv2855053,nssv2857752,nssv2855067,nssv2855078,nssv2855059,nssv2855014,nssv2854964,nssv2855037,nssv2855002,nssv2854921,nssv2854952,nssv2854910,nssv2855018,nssv2854925,nssv2855010,nssv2855056,nssv2855052,nssv2855075,nssv2855113,nssv2855055,nssv2855015,nssv2855068,nssv2855083,nssv2854978,nssv2855006,nssv2854954,nssv2855049,nssv2855060,nssv2855054,nssv2855096,nssv2854979,nssv2854944,nssv2855089 M 2366 0 406 "" NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10857,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11892,NA11893,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12760,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12817,NA12818,NA12827,NA12828,NA12830,NA12832,NA12842,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12889,NA12890,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18506,NA18507,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18522,NA18523,NA18524,NA18532,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18593,NA18594,NA18605,NA18609,NA18612,NA18620,NA18622,NA18624,NA18632,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18953,NA18956,NA18959,NA18960,NA18961,NA18965,NA18967,NA18969,NA18971,NA18972,NA18974,NA18975,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19121,NA19122,NA19123,NA19128,NA19129,NA19130,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19152,NA19153,NA19154,NA19159,NA19172,NA19173,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19190,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19236,NA19239,NA19247,NA19248,NA19249,NA19252,NA19256,NA19258,NA21302,NA21303,NA21307,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21362,NA21363,NA21365,NA21366,NA21381,NA21384,NA21386,NA21387,NA21388,NA21389,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21475,NA21476,NA21477,NA21478,NA21485,NA21486,NA21487,NA21488,NA21489,NA21494,NA21512,NA21513,NA21514,NA21522,NA21524,NA21525,NA21580,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21648,NA21686,NA21717,NA21718 nsv498709 1 208144678 208152601 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585424 M 9 0 1 "" nsv160131 1 208144679 208152594 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178709 M 24 "" esv2422020 1 208148236 208150607 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5159325,essv5092641,essv5079536,essv5092032,essv5002384,essv5137979,essv5028575,essv5092194,essv5082959,essv5006537,essv5119762,essv5043212,essv5076031,essv5007291,essv5157726,essv5061992,essv5068105,essv5014013,essv5152918,essv5084359,essv5017190,essv5067875,essv5068641,essv5006463,essv5116411,essv5041810,essv5023513,essv5125843,essv5014451,essv5037411,essv5015294,essv5149912,essv5004253,essv5003450,essv5064282,essv5018103,essv5151647,essv5131369,essv5031610,essv5132379,essv5029622,essv5148040,essv5022398,essv5099520,essv5133024,essv5076893,essv5107392,essv5048424,essv5038929,essv5071717,essv5034687,essv5119515,essv5071395,essv5050758,essv5158439,essv5145654,essv5093434,essv5008511,essv5023460,essv5086622,essv5071632,essv5095854,essv5070449,essv5150127,essv5078149,essv5016243,essv5096042,essv5074029,essv5091391,essv5072901,essv5043776,essv5065074,essv5120031,essv5056586,essv5128964,essv5105348,essv5063547,essv5111202,essv5035692,essv5007443,essv5071187,essv5007733,essv5044867,essv5018685,essv5097500,essv5108085,essv5024535,essv5040959,essv5018038,essv5061116,essv5108638,essv5152184,essv5108385,essv5107017,essv5054531,essv5016971,essv5078962,essv5100687,essv5070405,essv5063182,essv5075456,essv5113986,essv5017136,essv5072707,essv5071465,essv5003852,essv5102820,essv5021875,essv5008288,essv5052475,essv5120673,essv5132038,essv5106948,essv5103868,essv5083076,essv5007317,essv5080261,essv5134820,essv5094702,essv5089018,essv5073141,essv5049345,essv5126270,essv5030123,essv5062831,essv5022529,essv5136579,essv5067669,essv5080330,essv5105234,essv5118140,essv5028047,essv5048190,essv5056783,essv5093642,essv5050571,essv5087829,essv5102798,essv5153325,essv5066638,essv5033057,essv5037598,essv5130842,essv5139417,essv5060594,essv5088964,essv5004739,essv5020646,essv5026497,essv5110255,essv5018623,essv5039727,essv5158053,essv5116525,essv5059229,essv5068459,essv5019930,essv5061040,essv5061023,essv5068968,essv5030586,essv5030005,essv5073234,essv5075497,essv5018555,essv5093330,essv5073774,essv5145103,essv5088180,essv5057206,essv5148194,essv5145531,essv5113678,essv5155969,essv5057876,essv5077674,essv5023958,essv5160129,essv5160889,essv5143959,essv5094405,essv5060942,essv5018412,essv5124480,essv5038439,essv5025736,essv5037613,essv5011753,essv5084854,essv5094471,essv5075603,essv5002970,essv5037461,essv5094322,essv5123505,essv5145016,essv5027359,essv5119827,essv5078711,essv5108547,essv5042945,essv5133734,essv5020278,essv5134927,essv5108142,essv5088168,essv5052259,essv5090519,essv5141851,essv5066729,essv5020879,essv5110436,essv5159430,essv5102063,essv5014362,essv5145106,essv5100409,essv5080169,essv5131331,essv5099926,essv5115176,essv5019517,essv5052827,essv5015928,essv5092415,essv5156658,essv5116587,essv5043417,essv5060509,essv5043042,essv5036503,essv5101999,essv5109685,essv5068007,essv5143887,essv5153033,essv5032916,essv5003811,essv5109976,essv5107367,essv5045299,essv5129205,essv5006996,essv5118455,essv5017365,essv5046001,essv5118601,essv5012763,essv5105634,essv5141363,essv5152886,essv5111329,essv5119833,essv5057742,essv5036173,essv5022115,essv5089426,essv5129282,essv5094627,essv5015134,essv5130665,essv5084432,essv5095290,essv5049510,essv5030549,essv5107730,essv5120027,essv5157579,essv5113478,essv5134869,essv5023891,essv5117008,essv5120415,essv5085746,essv5099354,essv5058215,essv5070254,essv5138306,essv5017711,essv5036746,essv5140493,essv5007266,essv5054711,essv5063545,essv5084466,essv5062666,essv5021715,essv5138110,essv5037096,essv5060618,essv5069701,essv5014060,essv5105423,essv5006529,essv5087510,essv5002520,essv5158437,essv5046084,essv5006701,essv5042573,essv5109596,essv5138464,essv5060519,essv5071530,essv5093331,essv5045384,essv5107071,essv5012043,essv5087718,essv5038638,essv5027768,essv5138900,essv5062063,essv5053027,essv5061815,essv5010326,essv5006563,essv5085554,essv5149024,essv5033906,essv5012395,essv5099865,essv5040394,essv5066483,essv5084638,essv5060025,essv5025964,essv5016363,essv5134914,essv5014939,essv5085054,essv5120674,essv5002815,essv5023157,essv5059215,essv5101956,essv5058498,essv5103963,essv5054334,essv5136136,essv5148449,essv5111949,essv5145451,essv5035941,essv5045587,essv5112348,essv5095223,essv5150082,essv5156774,essv5089393,essv5142975,essv5070422,essv5097482,essv5018741,essv5141806,essv5060288,essv5032855,essv5050164,essv5159002,essv5033502,essv5122678,essv5025553,essv5026479,essv5058295,essv5058328,essv5118807,essv5089794,essv5052492,essv5066302,essv5021141,essv5099400,essv5147061,essv5038465,essv5044790,essv5003564,essv5069404,essv5028342,essv5152787,essv5142466,essv5081601,essv5135422,essv5154045,essv5010764,essv5017085,essv5140927,essv5118038,essv5123938,essv5101472,essv5013099,essv5157371,essv5080822,essv5037054,essv5053997,essv5020534,essv5004841,essv5033253,essv5140163,essv5007677,essv5038760,essv5050916,essv5015752,essv5055054,essv5140820,essv5049702,essv5140612,essv5055730,essv5154257,essv5044679,essv5160519,essv5150863,essv5028115,essv5019315,essv5064995,essv5010451,essv5021921,essv5140955,essv5015004,essv5096640,essv5084625,essv5152419,essv5019887,essv5004582,essv5058239,essv5107289,essv5070799,essv5140877,essv5006276,essv5123286,essv5136614,essv5067695,essv5107133,essv5153801,essv5018054,essv5082479,essv5015968,essv5089787,essv5008277,essv5155488,essv5120802,essv5141831,essv5035233,essv5104330,essv5049183,essv5064020,essv5106438,essv5128253,essv5088310,essv5068809,essv5066214,essv5118137,essv5038445,essv5143745,essv5122654,essv5051582,essv5063903,essv5152389,essv5032775,essv5045147,essv5114264,essv5149128,essv5114313,essv5115281,essv5123692,essv5046425,essv5139020,essv5039209,essv5016512,essv5143198,essv5062872,essv5077680,essv5018458,essv5062786,essv5095042,essv5158303,essv5151234,essv5080542,essv5025113,essv5114296,essv5051024,essv5120036,essv5053052,essv5092718,essv5072623,essv5091241,essv5102434,essv5132879,essv5056626,essv5023279,essv5160867,essv5148372,essv5024446,essv5137701,essv5160572,essv5156538,essv5080790,essv5147921,essv5082966,essv5030575,essv5096627,essv5150042,essv5071138,essv5132748,essv5132028,essv5098090,essv5038304,essv5055745,essv5142655,essv5089433,essv5051634,essv5156087,essv5141785,essv5002036,essv5160126,essv5012065,essv5065061,essv5007081,essv5102776,essv5139444,essv5034967,essv5127494,essv5086051,essv5074639,essv5023966,essv5107134,essv5083343,essv5087178,essv5128642,essv5075078,essv5010111,essv5157015,essv5014059,essv5090521,essv5052278,essv5119694,essv5031382,essv5107861,essv5123456,essv5088817,essv5152217,essv5071651,essv5151488,essv5111848,essv5022478,essv5053216,essv5128999,essv5091664,essv5154444,essv5149338,essv5036132,essv5063229,essv5109962,essv5055063,essv5008995,essv5149300,essv5021311,essv5071490,essv5152411,essv5144717,essv5158308,essv5161026,essv5060601,essv5046103,essv5091773,essv5091951,essv5158752,essv5088221,essv5096717,essv5037046,essv5157923,essv5054667,essv5101051,essv5051977,essv5136673,essv5100627,essv5125977,essv5157310,essv5017871,essv5030314,essv5050223,essv5125805,essv5076284,essv5079641,essv5147058,essv5103443,essv5135716,essv5148765,essv5058798,essv5025101,essv5126407,essv5088146,essv5080291,essv5034243,essv5108441,essv5065790,essv5104147,essv5086989,essv5050572,essv5014591,essv5023541,essv5063658,essv5159453,essv5059794,essv5093802,essv5068351,essv5140385,essv5127785,essv5018244,essv5040081,essv5147434,essv5035455,essv5024479,essv5010340,essv5033243,essv5117830,essv5105006,essv5152059,essv5016784,essv5004181,essv5097806,essv5055521,essv5060369,essv5066950,essv5003957,essv5130664,essv5099729,essv5118547,essv5065737,essv5054585,essv5060645,essv5102834,essv5081241,essv5026326,essv5155270,essv5115880,essv5129570,essv5063535,essv5037475,essv5117906,essv5019744,essv5088866,essv5114238,essv5029360,essv5007499,essv5015116,essv5044900,essv5128872,essv5120314,essv5019735,essv5145304,essv5105917,essv5054441,essv5041685,essv5044113,essv5140547,essv5011155,essv5077407,essv5147384,essv5099248,essv5150155,essv5098449,essv5155759,essv5024051,essv5111761,essv5091012,essv5077006,essv5078185,essv5097639,essv5046786,essv5032238,essv5112706,essv5159513,essv5139929,essv5104434,essv5160189,essv5023432,essv5119780,essv5080334,essv5131189,essv5144904,essv5103590,essv5106135,essv5082417,essv5101827,essv5093790,essv5135484,essv5118679,essv5119344,essv5045255,essv5101480,essv5090614,essv5127240,essv5061022,essv5011377,essv5090114,essv5044225,essv5043960,essv5093341,essv5034952,essv5086511,essv5141905,essv5034211,essv5135281,essv5142992,essv5147211,essv5144706,essv5027280,essv5100703,essv5125455,essv5098351,essv5006637,essv5039696,essv5068342,essv5032713,essv5006168,essv5086216,essv5031338,essv5159667,essv5111961,essv5138526,essv5097872,essv5069501,essv5062034,essv5016567,essv5019112,essv5137972,essv5151533,essv5023283,essv5010280,essv5140817,essv5080333,essv5059396,essv5089171,essv5155478,essv5125803,essv5077506,essv5121622,essv5075237,essv5149157,essv5027049,essv5137110,essv5021080,essv5148882,essv5143802,essv5002322,essv5024335,essv5064086,essv5145040,essv5021217,essv5067649,essv5062102,essv5042097,essv5018461,essv5099287,essv5072137,essv5118165,essv5134893,essv5039284,essv5019277,essv5062664,essv5142591,essv5087524,essv5087393,essv5138357,essv5087771,essv5093770,essv5055144,essv5050507,essv5091608,essv5140178,essv5110408,essv5098623,essv5111474,essv5041604,essv5071708,essv5009967,essv5092945,essv5028539,essv5062874,essv5103431,essv5140409,essv5047786,essv5057423,essv5101831,essv5131444,essv5048902,essv5055613,essv5082012,essv5111582,essv5072772,essv5133578,essv5083800,essv5035552,essv5026559,essv5018495,essv5113532,essv5022790,essv5063404,essv5037289,essv5063069,essv5032544,essv5101887,essv5120487,essv5060284,essv5003510,essv5121870,essv5025738,essv5075609,essv5085952,essv5039925,essv5063957,essv5033972,essv5023758,essv5126498,essv5082290,essv5097868,essv5088169,essv5135611,essv5130612,essv5087603,essv5040670,essv5037596,essv5152000,essv5072967,essv5016127,essv5066602,essv5054359,essv5025663,essv5154991,essv5041398,essv5040494,essv5070779,essv5078184,essv5087333,essv5038964,essv5090179,essv5035855,essv5093587,essv5020144,essv5031786,essv5116897,essv5117366,essv5131814,essv5153244,essv5133429,essv5014518,essv5007948,essv5143659,essv5057672,essv5084389,essv5078231,essv5068203,essv5102580,essv5033752,essv5155633,essv5032222,essv5088375,essv5124825,essv5049006,essv5043508,essv5013173,essv5096925,essv5007056,essv5152418,essv5128742,essv5034289,essv5140870,essv5118474,essv5053747,essv5100528,essv5087763,essv5057511,essv5129782,essv5148173,essv5072285,essv5061115,essv5013535,essv5124867,essv5070699,essv5116586,essv5036887,essv5052277,essv5131774,essv5050300,essv5146242,essv5064469,essv5081014,essv5153466,essv5072351,essv5147177,essv5009772,essv5034322,essv5127938,essv5159009,essv5102765,essv5085465,essv5043705,essv5110393,essv5005709,essv5005023,essv5136205,essv5159733,essv5020333,essv5075287,essv5037064,essv5009247,essv5002283,essv5010608,essv5021441,essv5132642,essv5126805,essv5017051,essv5016377,essv5132016,essv5088353,essv5016055,essv5129042,essv5135122,essv5048795,essv5042506,essv5013599 M 1184 0 920 "" NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA06997,NA07000,NA07014,NA07022,NA07031,NA07037,NA07045,NA07051,NA07055,NA07056,NA07345,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10846,NA10847,NA10850,NA10852,NA10853,NA10854,NA10855,NA10861,NA10863,NA10864,NA10865,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11891,NA11892,NA11893,NA11917,NA11918,NA11919,NA11920,NA11930,NA11931,NA11992,NA11993,NA11994,NA11995,NA12005,NA12006,NA12045,NA12056,NA12057,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12239,NA12249,NA12264,NA12272,NA12273,NA12275,NA12282,NA12283,NA12286,NA12287,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12386,NA12399,NA12400,NA12413,NA12489,NA12546,NA12707,NA12708,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12760,NA12763,NA12766,NA12767,NA12775,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12817,NA12818,NA12827,NA12828,NA12830,NA12832,NA12842,NA12864,NA12865,NA12872,NA12873,NA12874,NA12875,NA12877,NA12889,NA12890,NA12892,NA17966,NA17967,NA17969,NA17974,NA17975,NA17976,NA17977,NA17979,NA17981,NA17982,NA17983,NA17986,NA17987,NA17988,NA17990,NA17993,NA17996,NA17997,NA17998,NA18102,NA18108,NA18109,NA18112,NA18114,NA18117,NA18122,NA18124,NA18125,NA18127,NA18128,NA18129,NA18131,NA18133,NA18134,NA18135,NA18136,NA18138,NA18141,NA18143,NA18144,NA18146,NA18147,NA18148,NA18149,NA18152,NA18154,NA18156,NA18158,NA18159,NA18160,NA18161,NA18162,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18505,NA18506,NA18507,NA18509,NA18510,NA18511,NA18515,NA18516,NA18517,NA18518,NA18520,NA18524,NA18526,NA18529,NA18532,NA18534,NA18542,NA18544,NA18545,NA18546,NA18550,NA18552,NA18555,NA18557,NA18558,NA18559,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18593,NA18594,NA18595,NA18597,NA18599,NA18602,NA18605,NA18609,NA18610,NA18612,NA18613,NA18614,NA18617,NA18619,NA18620,NA18622,NA18623,NA18624,NA18626,NA18627,NA18631,NA18632,NA18635,NA18636,NA18637,NA18639,NA18640,NA18641,NA18645,NA18670,NA18674,NA18682,NA18685,NA18689,NA18694,NA18696,NA18702,NA18704,NA18740,NA18757,NA18852,NA18853,NA18854,NA18855,NA18857,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18871,NA18872,NA18873,NA18874,NA18875,NA18909,NA18910,NA18911,NA18912,NA18913,NA18914,NA18916,NA18917,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18939,NA18940,NA18942,NA18944,NA18945,NA18946,NA18947,NA18948,NA18949,NA18951,NA18953,NA18955,NA18956,NA18957,NA18959,NA18960,NA18961,NA18963,NA18965,NA18967,NA18969,NA18971,NA18972,NA18974,NA18975,NA18976,NA18977,NA18979,NA18981,NA18987,NA18990,NA18991,NA18994,NA18997,NA18998,NA18999,NA19000,NA19001,NA19002,NA19005,NA19007,NA19009,NA19027,NA19028,NA19031,NA19035,NA19036,NA19038,NA19041,NA19044,NA19054,NA19055,NA19056,NA19058,NA19059,NA19064,NA19065,NA19067,NA19072,NA19074,NA19076,NA19077,NA19078,NA19079,NA19084,NA19086,NA19087,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19121,NA19122,NA19123,NA19128,NA19129,NA19130,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19146,NA19147,NA19148,NA19149,NA19150,NA19152,NA19153,NA19154,NA19159,NA19172,NA19173,NA19175,NA19176,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19190,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19203,NA19204,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19213,NA19214,NA19215,NA19221,NA19222,NA19226,NA19235,NA19236,NA19238,NA19239,NA19240,NA19247,NA19248,NA19249,NA19256,NA19258,NA19307,NA19308,NA19309,NA19310,NA19311,NA19313,NA19314,NA19315,NA19316,NA19319,NA19321,NA19324,NA19327,NA19332,NA19334,NA19346,NA19350,NA19352,NA19359,NA19372,NA19374,NA19375,NA19376,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19391,NA19393,NA19394,NA19396,NA19397,NA19398,NA19399,NA19403,NA19404,NA19428,NA19429,NA19430,NA19434,NA19435,NA19436,NA19438,NA19440,NA19443,NA19445,NA19448,NA19451,NA19452,NA19455,NA19457,NA19462,NA19463,NA19467,NA19469,NA19471,NA19472,NA19473,NA19474,NA19625,NA19652,NA19653,NA19656,NA19657,NA19658,NA19659,NA19663,NA19664,NA19665,NA19669,NA19670,NA19671,NA19675,NA19676,NA19677,NA19678,NA19679,NA19680,NA19684,NA19700,NA19701,NA19702,NA19703,NA19704,NA19705,NA19708,NA19711,NA19712,NA19713,NA19714,NA19716,NA19718,NA19719,NA19721,NA19722,NA19724,NA19725,NA19726,NA19727,NA19746,NA19749,NA19751,NA19755,NA19756,NA19757,NA19759,NA19760,NA19761,NA19762,NA19763,NA19770,NA19771,NA19772,NA19773,NA19774,NA19777,NA19779,NA19781,NA19782,NA19783,NA19784,NA19788,NA19789,NA19790,NA19794,NA19795,NA19796,NA19819,NA19828,NA19834,NA19836,NA19900,NA19908,NA19909,NA19914,NA19915,NA19917,NA19919,NA19985,NA20126,NA20127,NA20128,NA20276,NA20277,NA20279,NA20281,NA20282,NA20284,NA20287,NA20288,NA20291,NA20292,NA20294,NA20295,NA20297,NA20300,NA20301,NA20302,NA20319,NA20322,NA20332,NA20333,NA20334,NA20335,NA20336,NA20337,NA20340,NA20342,NA20343,NA20344,NA20345,NA20346,NA20347,NA20348,NA20349,NA20356,NA20357,NA20358,NA20359,NA20360,NA20364,NA20504,NA20505,NA20506,NA20508,NA20509,NA20510,NA20515,NA20516,NA20519,NA20522,NA20524,NA20525,NA20527,NA20529,NA20530,NA20531,NA20534,NA20538,NA20540,NA20541,NA20542,NA20543,NA20544,NA20581,NA20582,NA20586,NA20588,NA20589,NA20752,NA20753,NA20754,NA20755,NA20757,NA20758,NA20759,NA20761,NA20765,NA20766,NA20769,NA20771,NA20772,NA20773,NA20774,NA20775,NA20778,NA20785,NA20787,NA20792,NA20795,NA20796,NA20797,NA20799,NA20800,NA20801,NA20802,NA20803,NA20804,NA20805,NA20806,NA20807,NA20808,NA20809,NA20810,NA20811,NA20813,NA20816,NA20819,NA20826,NA20828,NA20845,NA20846,NA20847,NA20849,NA20850,NA20852,NA20853,NA20854,NA20856,NA20858,NA20859,NA20861,NA20862,NA20866,NA20869,NA20870,NA20871,NA20873,NA20874,NA20875,NA20876,NA20877,NA20879,NA20883,NA20884,NA20885,NA20887,NA20892,NA20894,NA20895,NA20896,NA20897,NA20898,NA20901,NA20902,NA20903,NA20904,NA20906,NA20907,NA20910,NA21088,NA21090,NA21091,NA21092,NA21094,NA21098,NA21100,NA21101,NA21102,NA21104,NA21105,NA21106,NA21107,NA21112,NA21113,NA21115,NA21116,NA21117,NA21118,NA21123,NA21125,NA21137,NA21141,NA21142,NA21143,NA21144,NA21295,NA21300,NA21302,NA21303,NA21308,NA21311,NA21312,NA21313,NA21314,NA21316,NA21317,NA21318,NA21320,NA21333,NA21336,NA21339,NA21344,NA21352,NA21355,NA21356,NA21357,NA21362,NA21363,NA21364,NA21365,NA21366,NA21367,NA21368,NA21370,NA21371,NA21378,NA21379,NA21381,NA21384,NA21385,NA21386,NA21387,NA21388,NA21389,NA21391,NA21399,NA21400,NA21401,NA21402,NA21403,NA21404,NA21405,NA21408,NA21414,NA21415,NA21417,NA21418,NA21420,NA21421,NA21423,NA21424,NA21425,NA21434,NA21435,NA21436,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21451,NA21457,NA21473,NA21475,NA21476,NA21477,NA21478,NA21485,NA21486,NA21487,NA21488,NA21489,NA21491,NA21494,NA21509,NA21510,NA21512,NA21513,NA21514,NA21517,NA21519,NA21520,NA21521,NA21522,NA21524,NA21525,NA21527,NA21529,NA21573,NA21574,NA21575,NA21576,NA21577,NA21580,NA21582,NA21583,NA21587,NA21597,NA21599,NA21600,NA21601,NA21608,NA21611,NA21613,NA21614,NA21616,NA21617,NA21631,NA21632,NA21648,NA21678,NA21682,NA21683,NA21686,NA21689,NA21693,NA21717,NA21718,NA21722,NA21723,NA21733,NA21738,NA21739,NA21740,NA21741,NA21776 nsv442573 1 208148236 208150607 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619616,nssv1619649,nssv1619446,nssv1619525,nssv1619448,nssv1619588,nssv1619644,nssv1619505,nssv1619629,nssv1619611,nssv1619631,nssv1619491,nssv1619521,nssv1619581,nssv1619640,nssv1619565,nssv1619503,nssv1619511,nssv1619569,nssv1619599,nssv1619641,nssv1619489,nssv1619597,nssv1619504,nssv1619553,nssv1619653,nssv1619570,nssv1619529,nssv1619607,nssv1619465,nssv1619643,nssv1619488,nssv1619464,nssv1619549,nssv1619481,nssv1619467,nssv1619657,nssv1619451,nssv1619537,nssv1619648,nssv1619436,nssv1619656,nssv1619478,nssv1619514,nssv1619574,nssv1619476,nssv1619455,nssv1619632,nssv1619633,nssv1619473,nssv1619545,nssv1619592,nssv1619524,nssv1619445,nssv1619652,nssv1619484,nssv1619547,nssv1619460,nssv1619618,nssv1619457,nssv1619486,nssv1619582,nssv1619561,nssv1619612,nssv1619544,nssv1619480,nssv1619523,nssv1619474,nssv1619546,nssv1619469,nssv1619562,nssv1619623,nssv1619604,nssv1619595,nssv1619606,nssv1619453,nssv1619519,nssv1619443,nssv1619539,nssv1619450,nssv1619471,nssv1619651,nssv1619571,nssv1619567,nssv1619495,nssv1619509,nssv1619642,nssv1619573,nssv1619563,nssv1619462,nssv1619559,nssv1619449,nssv1619497,nssv1619533,nssv1619609,nssv1619630,nssv1619625,nssv1619583,nssv1619596,nssv1619508,nssv1619442,nssv1619458,nssv1619598,nssv1619447,nssv1619527,nssv1619513,nssv1619470,nssv1619615,nssv1619512,nssv1619493,nssv1619494,nssv1619646,nssv1619627,nssv1619636,nssv1619628,nssv1619548,nssv1619600,nssv1619434,nssv1619526,nssv1619520,nssv1619578,nssv1619534,nssv1619550,nssv1619506,nssv1619541,nssv1619444,nssv1619532,nssv1619441,nssv1619535,nssv1619501,nssv1619564,nssv1619540,nssv1619477,nssv1619586,nssv1619490,nssv1619647,nssv1619617,nssv1619515,nssv1619459,nssv1619551,nssv1619468,nssv1619502,nssv1619622,nssv1619435,nssv1619621,nssv1619624,nssv1619518,nssv1619593,nssv1619655,nssv1619614,nssv1619613,nssv1619650,nssv1619587,nssv1619498,nssv1619472,nssv1619538,nssv1619585,nssv1619483,nssv1619437,nssv1619575,nssv1619602,nssv1619603,nssv1619536,nssv1619637,nssv1619510,nssv1619556,nssv1619555,nssv1619557,nssv1619454,nssv1619635,nssv1619580,nssv1619517,nssv1619542,nssv1619530,nssv1619475,nssv1619440,nssv1619566,nssv1619584,nssv1619487,nssv1619590,nssv1619591,nssv1619492,nssv1619500,nssv1619499,nssv1619554,nssv1619601,nssv1619579,nssv1619654,nssv1619482,nssv1619576,nssv1619634,nssv1619558,nssv1619516,nssv1619572,nssv1619463,nssv1619638,nssv1619531,nssv1619479,nssv1619485,nssv1619605,nssv1619461,nssv1619626,nssv1619552,nssv1619594,nssv1619619,nssv1619639,nssv1619466,nssv1619452,nssv1619456,nssv1619438,nssv1619439,nssv1619496,nssv1619528,nssv1619507,nssv1619560,nssv1619577,nssv1619645,nssv1619610,nssv1619589,nssv1619608,nssv1619543,nssv1619620,nssv1619568,nssv1619522 M 270 0 224 "" NA06985,NA06991,NA06993,NA06994,NA07000,NA07019,NA07022,NA07034,NA07048,NA07055,NA07056,NA07345,NA07348,NA07357,NA10830,NA10831,NA10835,NA10838,NA10839,NA10846,NA10847,NA10851,NA10854,NA10855,NA10857,NA10860,NA10861,NA10863,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12006,NA12043,NA12056,NA12057,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12249,NA12264,NA12707,NA12717,NA12740,NA12750,NA12751,NA12760,NA12763,NA12801,NA12802,NA12812,NA12813,NA12814,NA12864,NA12865,NA12872,NA12873,NA12874,NA12875,NA12892,NA18500,NA18501,NA18502,NA18503,NA18505,NA18506,NA18507,NA18515,NA18516,NA18517,NA18521,NA18522,NA18523,NA18524,NA18526,NA18529,NA18532,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18593,NA18594,NA18605,NA18609,NA18612,NA18620,NA18622,NA18623,NA18624,NA18632,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18871,NA18872,NA18912,NA18913,NA18914,NA18940,NA18942,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18953,NA18956,NA18959,NA18960,NA18961,NA18965,NA18967,NA18969,NA18971,NA18972,NA18974,NA18975,NA18976,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19116,NA19128,NA19129,NA19130,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19172,NA19173,NA19192,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19221,NA19222,NA19238,NA19239 nsv549098 1 208148829 208152310 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736033 M 17421 1 0 "" nsv549099 1 208148829 208152379 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736258,nssv736145,nssv736061,nssv736390,nssv736388,nssv736387,nssv736142,nssv736333,nssv736270,nssv736192,nssv736141,nssv736395,nssv736123,nssv736159,nssv736399,nssv736394,nssv736393,nssv736257,nssv736195,nssv736412,nssv736398,nssv736400,nssv736256,nssv736396,nssv736397,nssv736402,nssv736264,nssv736433,nssv736122,nssv736290,nssv736401,nssv736411,nssv736405,nssv736403,nssv736259,nssv736263,nssv736404,nssv736406,nssv736262,nssv736261,nssv736260,nssv736064,nssv736408,nssv736269,nssv736265,nssv736407,nssv736267,nssv736410,nssv736409,nssv736268,nssv736266,nssv736385,nssv736280,nssv736276,nssv736422,nssv736136,nssv736272,nssv736271,nssv736140,nssv736137,nssv736273,nssv736275,nssv736274,nssv736289,nssv736332,nssv736413,nssv736278,nssv736279,nssv736421,nssv736277,nssv736414,nssv736288,nssv736415,nssv736331,nssv736416,nssv736417,nssv736139,nssv736284,nssv736420,nssv736287,nssv736283,nssv736282,nssv736138,nssv736330,nssv736281,nssv736418,nssv736286,nssv736285,nssv736419,nssv736291,nssv736292,nssv736424,nssv736426,nssv736423,nssv736338,nssv736345,nssv736337,nssv736381,nssv736432,nssv736375,nssv736148,nssv736144,nssv736143,nssv736336,nssv736335,nssv736334,nssv736158,nssv736349,nssv736344,nssv736339,nssv736147,nssv736425,nssv736146,nssv736347,nssv736716,nssv736346,nssv736342,nssv736340,nssv736343,nssv736348,nssv736341,nssv736350,nssv736374,nssv736373,nssv736359,nssv736157,nssv736427,nssv736355,nssv736351,nssv736358,nssv736354,nssv736353,nssv736357,nssv736360,nssv736352,nssv736356,nssv736368,nssv736362,nssv736363,nssv736428,nssv736431,nssv736372,nssv736156,nssv736149,nssv736361,nssv736150,nssv736430,nssv736151,nssv736367,nssv736155,nssv736366,nssv736364,nssv736152,nssv736371,nssv736370,nssv736429,nssv736365,nssv736154,nssv736153,nssv736369,nssv736194,nssv736191,nssv736172,nssv736059,nssv736168,nssv736443,nssv736442,nssv736435,nssv736380,nssv736540,nssv736434,nssv736382,nssv736441,nssv736440,nssv736439,nssv736436,nssv736438,nssv736437,nssv736465,nssv736445,nssv736444,nssv736448,nssv736446,nssv736450,nssv736447,nssv736449,nssv736452,nssv736458,nssv736451,nssv736457,nssv736455,nssv736488,nssv736456,nssv736453,nssv736454,nssv736463,nssv736466,nssv736464,nssv736460,nssv736462,nssv736459,nssv736461,nssv736160,nssv736169,nssv736487,nssv736379,nssv736476,nssv736467,nssv736468,nssv736472,nssv736167,nssv736471,nssv736469,nssv736470,nssv736475,nssv736473,nssv736474,nssv736486,nssv736164,nssv736161,nssv736479,nssv736162,nssv736478,nssv736166,nssv736170,nssv736477,nssv736163,nssv736485,nssv736165,nssv736483,nssv736484,nssv736480,nssv736481,nssv736482,nssv736178,nssv736495,nssv736177,nssv736377,nssv736057,nssv736378,nssv736489,nssv736190,nssv736490,nssv736492,nssv736493,nssv736494,nssv736491,nssv736503,nssv736171,nssv736173,nssv736176,nssv736175,nssv736496,nssv736498,nssv736497,nssv736174,nssv736502,nssv736501,nssv736499,nssv736500,nssv736504,nssv736539,nssv736509,nssv736506,nssv736505,nssv736508,nssv736507,nssv736180,nssv736179,nssv736193,nssv736376,nssv736518,nssv736538,nssv736511,nssv736510,nssv736512,nssv736517,nssv736515,nssv736514,nssv736516,nssv736513,nssv736188,nssv736183,nssv736189,nssv736182,nssv736522,nssv736519,nssv736181,nssv736537,nssv736536,nssv736520,nssv736523,nssv736521,nssv736524,nssv736535,nssv736529,nssv736528,nssv736525,nssv736187,nssv736527,nssv736526,nssv736534,nssv736184,nssv736186,nssv736530,nssv736185,nssv736531,nssv736532,nssv736533,nssv736549,nssv736391,nssv736645,nssv736196,nssv736255,nssv736202,nssv736199,nssv736198,nssv736541,nssv736392,nssv736542,nssv736543,nssv736547,nssv736548,nssv736546,nssv736545,nssv736544,nssv736550,nssv736553,nssv736554,nssv736552,nssv736551,nssv736556,nssv736559,nssv736557,nssv736580,nssv736558,nssv736555,nssv736715,nssv736571,nssv736564,nssv736135,nssv736197,nssv736563,nssv736562,nssv736561,nssv736560,nssv736565,nssv736570,nssv736567,nssv736579,nssv736566,nssv736569,nssv736568,nssv736121,nssv736092,nssv736095,nssv736573,nssv736578,nssv736572,nssv736093,nssv736574,nssv736576,nssv736577,nssv736575,nssv736201,nssv736094,nssv736592,nssv736046,nssv736045,nssv736582,nssv736583,nssv736384,nssv736036,nssv736386,nssv736581,nssv736389,nssv736584,nssv736091,nssv736035,nssv736591,nssv736587,nssv736586,nssv736585,nssv736588,nssv736644,nssv736034,nssv736590,nssv736589,nssv736603,nssv736043,nssv736596,nssv736044,nssv736329,nssv736595,nssv736602,nssv736594,nssv736383,nssv736593,nssv736601,nssv736041,nssv736597,nssv736042,nssv736037,nssv736600,nssv736040,nssv736599,nssv736038,nssv736598,nssv736039,nssv736074,nssv736200,nssv736087,nssv736624,nssv736048,nssv736090,nssv736047,nssv736071,nssv736612,nssv736605,nssv736606,nssv736604,nssv736607,nssv736609,nssv736613,nssv736611,nssv736608,nssv736610,nssv736623,nssv736072,nssv736643,nssv736614,nssv736618,nssv736073,nssv736086,nssv736615,nssv736616,nssv736617,nssv736622,nssv736070,nssv736069,nssv736049,nssv736050,nssv736619,nssv736621,nssv736620,nssv736051,nssv736052,nssv736078,nssv736089,nssv736088,nssv736085,nssv736642,nssv736080,nssv736079,nssv736629,nssv736077,nssv736628,nssv736627,nssv736626,nssv736625,nssv736081,nssv736641,nssv736634,nssv736083,nssv736631,nssv736632,nssv736630,nssv736084,nssv736633,nssv736082,nssv736640,nssv736636,nssv736639,nssv736635,nssv736637,nssv736638,nssv736646,nssv736224,nssv736213,nssv736113,nssv736133,nssv736120,nssv736100,nssv736112,nssv736328,nssv736254,nssv736097,nssv736697,nssv736096,nssv736724,nssv736647,nssv736656,nssv736099,nssv736655,nssv736648,nssv736654,nssv736076,nssv736723,nssv736696,nssv736098,nssv736068,nssv736653,nssv736056,nssv736651,nssv736650,nssv736649,nssv736652,nssv736053,nssv736102,nssv736658,nssv736119,nssv736695,nssv736111,nssv736103,nssv736657,nssv736660,nssv736659,nssv736694,nssv736107,nssv736104,nssv736661,nssv736101,nssv736108,nssv736109,nssv736665,nssv736662,nssv736663,nssv736671,nssv736105,nssv736110,nssv736664,nssv736106,nssv736721,nssv736698,nssv736054,nssv736699,nssv736203,nssv736212,nssv736131,nssv736117,nssv736670,nssv736223,nssv736667,nssv736702,nssv736114,nssv736700,nssv736703,nssv736706,nssv736666,nssv736701,nssv736722,nssv736134,nssv736130,nssv736129,nssv736705,nssv736115,nssv736116,nssv736132,nssv736704,nssv736707,nssv736118,nssv736128,nssv736127,nssv736124,nssv736126,nssv736125,nssv736206,nssv736708,nssv736719,nssv736222,nssv736211,nssv736669,nssv736205,nssv736204,nssv736668,nssv736711,nssv736214,nssv736209,nssv736208,nssv736207,nssv736221,nssv736210,nssv736718,nssv736216,nssv736713,nssv736714,nssv736220,nssv736215,nssv736720,nssv736712,nssv736717,nssv736219,nssv736217,nssv736218,nssv736237,nssv736232,nssv736710,nssv736227,nssv736747,nssv736693,nssv736060,nssv736058,nssv736734,nssv736736,nssv736250,nssv736672,nssv736253,nssv736680,nssv736327,nssv736674,nssv736226,nssv736067,nssv736231,nssv736733,nssv736725,nssv736731,nssv736726,nssv736225,nssv736075,nssv736727,nssv736673,nssv736228,nssv736732,nssv736735,nssv736730,nssv736229,nssv736729,nssv736230,nssv736728,nssv736249,nssv736235,nssv736241,nssv736745,nssv736738,nssv736236,nssv736737,nssv736240,nssv736676,nssv736234,nssv736233,nssv736055,nssv736239,nssv736679,nssv736238,nssv736675,nssv736746,nssv736744,nssv736743,nssv736739,nssv736248,nssv736678,nssv736740,nssv736243,nssv736242,nssv736748,nssv736742,nssv736247,nssv736741,nssv736245,nssv736677,nssv736244,nssv736246,nssv736298,nssv736066,nssv736308,nssv736251,nssv736065,nssv736252,nssv736293,nssv736297,nssv736295,nssv736296,nssv736294,nssv736709,nssv736683,nssv736751,nssv736300,nssv736681,nssv736299,nssv736684,nssv736307,nssv736326,nssv736682,nssv736301,nssv736750,nssv736306,nssv736305,nssv736749,nssv736752,nssv736302,nssv736304,nssv736303,nssv736311,nssv736063,nssv736310,nssv736320,nssv736309,nssv736325,nssv736687,nssv736319,nssv736685,nssv736692,nssv736312,nssv736318,nssv736691,nssv736686,nssv736313,nssv736316,nssv736315,nssv736317,nssv736314,nssv736321,nssv736688,nssv736062,nssv736324,nssv736323,nssv736690,nssv736689,nssv736322 M 17421 4 715 "" dgv795n54 1 208149371 208152379 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549100,nsv549102 M 17421 0 5 "" dgv796n54 1 208149449 208152379 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549101,nsv549103 M 17421 5 0 "" nsv160698 1 208230498 208230498 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179276 M 24 SYT14 nsv818800 1 208325276 208370942 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417434 M 112 1 0 SYT14 NA18952 esv2561272 1 208361201 208362867 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5378829 M 1 0 1 SYT14 NA18507 esv2399148 1 208361749 208362439 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4953576 M 1 0 1 SYT14 NA18507 esv8433 1 208361787 208362483 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30874 M 1 0 0 SYT14 esv4684 1 208361879 208362293 CNV loss Wang_et_al_2008 18987735 Sequencing essv27125 M 1 0 1 SYT14 YH esv1564426 1 208361943 208362262 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3684442 M 2 0 1 SYT14 HuRef nsv4365 1 208368813 208400929 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3719 M 9 1 0 SYT14 NA12878 nsv468072 1 208370942 208404819 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543205 M 1557 0 1 SYT14 1780862001_A dgv797n54 1 208370942 208405020 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549105,nsv549104 M 17421 0 2 SYT14 1780862001_A nsv526050 1 208447880 208453208 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702287 M 2026 0 1 "" nsv8769 1 208470132 208631211 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv27021,nssv25158,nssv24574 M 31 3 0 HHAT,SERTAD4,SERTAD4-AS1 NA07029,NA18504,NA18517 nsv945274 1 208504737 208507160 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1814171,nssv1817044,nssv1814153,nssv1817049,nssv1817053,nssv1814140,nssv1817052,nssv1817043,nssv1817060,nssv1814170,nssv1817055,nssv1814174,nssv1814144,nssv1817069,nssv1814159,nssv1817062,nssv1814146,nssv1814178,nssv1817056,nssv1817042,nssv1814162,nssv1814176,nssv1817054,nssv1814189,nssv1814148,nssv1817038,nssv1814151,nssv1814183,nssv1814142,nssv1814172,nssv1814143,nssv1817047,nssv1817059,nssv1814186,nssv1814164,nssv1814181,nssv1814158,nssv1817031,nssv1817058,nssv1814177,nssv1817051,nssv1817030,nssv1814157,nssv1817034,nssv1814160,nssv1817041,nssv1814145,nssv1817067,nssv1814147,nssv1817045,nssv1817057,nssv1814188,nssv1814155,nssv1817028,nssv1814150,nssv1817025,nssv1814168,nssv1817068,nssv1814149,nssv1814180,nssv1814161,nssv1817036,nssv1814152,nssv1814175,nssv1814154,nssv1817048,nssv1814169,nssv1817035,nssv1814156,nssv1817066,nssv1814141,nssv1814187,nssv1814166,nssv1817064,nssv1817033,nssv1814184,nssv1817024,nssv1814182,nssv1817046,nssv1817063,nssv1817061,nssv1814185,nssv1814167,nssv1817040,nssv1817039,nssv1814179,nssv1814173,nssv1814165,nssv1817032,nssv1817026,nssv1817037,nssv1817070,nssv1817050,nssv1814163,nssv1817027,nssv1817029,nssv1817065 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2758995 1 208646146 208687402 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756883 M 270 0 4 HHAT NA19143,NA19145,NA19160,NA19161 nsv999294 1 208665352 208679151 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500004,nssv3484355 M 29084 0 2 HHAT nsv515857 1 208670753 208680239 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv670153,nssv682738,nssv690432,nssv675250,nssv668526,nssv699524,nssv665032,nssv673890,nssv677861,nssv692528,nssv660922,nssv686153,nssv686575 M 2026 0 13 HHAT nsv818811 1 208670753 208680239 CNV loss Wang_et_al_2007 17921354 SNP array nssv1418132,nssv1418133 M 112 0 2 HHAT NA19143,NA19145 nsv1001747 1 208671357 208681904 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499357,nssv3500422,nssv3492386,nssv3490955,nssv3492380,nssv3494155,nssv3494905,nssv3486295,nssv3487696,nssv3483549 M 29084 0 10 HHAT nsv999833 1 208671357 208686834 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496810,nssv3491097 M 29084 0 2 HHAT nsv441734 1 208671369 208679147 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656860,nssv1656858,nssv1656861,nssv1656859,nssv1656863,nssv1656862 M 270 0 6 HHAT NA19143,NA19145,NA19160,NA19161,NA19204,NA19205 esv2421437 1 208671369 208680239 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5097481,essv5091852,essv5093709,essv5021859,essv5045329,essv5054433,essv5141876,essv5146125,essv5065649,essv5108870,essv5113616,essv5099042,essv5053282,essv5005621,essv5099353,essv5043492,essv5131715,essv5142834,essv5055585,essv5017139,essv5085125,essv5150439,essv5065423 M 1184 0 23 HHAT NA19095,NA19097,NA19121,NA19123,NA19143,NA19160,NA19161,NA19176,NA19204,NA19213,NA19327,NA19403,NA19468,NA19471,NA19472,NA19718,NA20288,NA20332,NA20333,NA20356,NA20358,NA21295,NA21524 esv2764216 1 208671369 208681916 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006956,essv7006963,essv7006961,essv7006968,essv7006962,essv7006960,essv7006959,essv7006957,essv7006971,essv7006964,essv7006970,essv7006969,essv7006958,essv7006972,essv7006954,essv7006965 M 1109 0 16 HHAT RW_0058,RW_0060,RW_0072,RW_0075,RW_0114,RW_0185,RW_0186,RW_0196,RW_0258,RW_0266,RW_0331,RW_0341,RW_0504,RW_0540,RW_0619,RW_0656 nsv514040 1 208671680 208678576 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857805,nssv2857807,nssv2857802,nssv2857803,nssv2857804,nssv2857800,nssv2857798,nssv2857806,nssv2857801,nssv2857797,nssv2857799 M 2366 0 11 HHAT NA19095,NA19097,NA19121,NA19123,NA19143,NA19145,NA19160,NA19161,NA19204,NA19205,NA21524 nsv4376 1 208694243 208738949 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8049 M 9 0 1 HHAT NA12156 esv2497060 1 208705231 208706645 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5390708 M 1 0 1 HHAT NA18507 esv2255563 1 208705727 208706165 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4673627 M 1 0 1 HHAT NA18507 esv989821 1 208705824 208705943 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581153 M 3 0 1 HHAT HuRef esv1269016 1 208705958 208706078 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3777678 M 2 0 1 HHAT HuRef esv275540 1 208724959 208729623 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585673,essv2585193 M 1250 1 1 HHAT nsv549106 1 208765342 208803131 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736764 M 17421 0 1 HHAT nsv1011702 1 208772946 208805653 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494553 M 29084 1 0 HHAT esv3935 1 208773111 208773480 CNV loss Wang_et_al_2008 18987735 Sequencing essv26376 M 1 0 1 HHAT YH esv2193652 1 208773124 208773527 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4700281 M 1 0 1 HHAT NA18507 esv1006570 1 208773228 208773327 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578280 M 3 0 1 HHAT HuRef esv1205334 1 208773316 208773416 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3690204 M 2 0 1 HHAT HuRef esv988198 1 208773923 208783175 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564955 M 3 0 1 HHAT HuRef dgv570n100 1 208783911 208809649 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003105,nsv1014480 M 29084 2 0 HHAT dgv798n54 1 208788497 208791951 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549116,nsv549107,nsv549120 M 17421 0 3 HHAT nsv819787 1 208788822 208791691 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419484 M 2 1 0 HHAT AK1 esv6795 1 208788866 208791764 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29236 M 1 0 0 HHAT nsv435854 1 208788878 208793886 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465876 M 2 0 1 HHAT NA15510 esv4955 1 208788882 208791631 CNV loss Wang_et_al_2008 18987735 Sequencing essv27396 M 1 0 1 HHAT YH dgv98n67 1 208789026 208791761 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826531,nsv826520 M 31 0 18 HHAT AK10,AK12,AK14,AK20,AK4,AK6,NA18542,NA18547,NA18552,NA18564,NA18570,NA18592,NA18949,NA18951,NA18968,NA18969,NA18973,NA18999 nsv820875 1 208789026 208791761 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420946 M 1 0 1 HHAT NA10851 esv22101 1 208789097 208791588 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13554 M 40 34 2 HHAT NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18523,NA18858,NA18907,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 dgv799n54 1 208789177 208790636 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549118,nsv549108,nsv549110,nsv549109,nsv549111 M 17421 0 16 HHAT dgv800n54 1 208789177 208791402 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549119,nsv549115,nsv549121,nsv549114,nsv549113,nsv549112 M 17421 0 37 HHAT nsv549117 1 208789177 208794138 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736812 M 17421 0 1 HHAT nsv549122 1 208790048 208791402 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736822 M 17421 0 1 HHAT nsv522480 1 208846559 208914967 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705847 M 2026 1 0 HHAT nsv473759 1 208852529 208852529 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018316 M 9 1 0 HHAT NA12156 nsv480053 1 208853866 208853866 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017262 M 9 0 0 HHAT nsv479407 1 208854038 208854038 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018351 M 9 0 0 HHAT nsv475447 1 208855124 208855124 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013918 M 9 1 0 HHAT NA19240 nsv480212 1 208855358 208855358 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011810 M 9 0 0 HHAT nsv523712 1 208856543 208856837 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699525 M 2026 0 1 HHAT nsv473703 1 208857658 208857658 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019261 M 9 1 0 HHAT NA19129 nsv473885 1 208858304 208858304 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012644 M 9 1 0 HHAT NA12156 nsv4387 1 208869521 208916934 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3728,nssv2770,nssv6133 M 9 3 0 HHAT NA12156,NA12878,NA18555 nsv509624 1 208883751 208904288 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617998,nssv619823,nssv623810,nssv621109 M 4 4 0 HHAT CHM,NA10860,NA15510,NA18994 esv3353042 1 208893769 208894092 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808946 M 185 1 0 HHAT NA12878 esv3348452 1 208893826 208893995 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652062 M 185 1 0 HHAT NA19240 esv1178918 1 208893959 208893959 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4337516 M 2 1 0 HHAT HuRef esv1059701 1 208893972 208893972 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4232772 M 2 1 0 HHAT HuRef esv1079015 1 208893978 208893978 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3694579 M 2 1 0 HHAT HuRef esv1365511 1 208893994 208893994 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3677249 M 2 1 0 HHAT HuRef esv1524987 1 208894015 208894015 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3839465 M 2 1 0 HHAT HuRef esv1002583 1 208894165 208896107 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563844 M 3 1 0 HHAT HuRef nsv527699 1 208896071 208896943 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704177 M 2026 0 1 HHAT nsv468083 1 208921438 208942815 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543216 M 1557 0 1 KCNH1 NINDS_21 nsv549123 1 208921438 208942815 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174042 M 17421 0 1 KCNH1 NINDS_21 nsv478747 1 208921991 208921991 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011159 M 9 1 0 KCNH1 NA18507 nsv480066 1 208929754 208929754 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015988 M 9 0 0 KCNH1 nsv481086 1 208930151 208930151 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015610 M 9 0 0 KCNH1 nsv473603 1 208930298 208930298 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020410 M 9 1 0 KCNH1 NA19129 nsv475328 1 208934750 208934750 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011877 M 9 1 0 KCNH1 NA19240 nsv506977 1 208955512 208961512 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619260,nssv617549,nssv620676 M 4 0 0 KCNH1 CHM,NA10860,NA15510 esv1789869 1 208958332 208958332 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4154448 M 2 1 0 KCNH1 HuRef nsv999018 1 208973862 209065929 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499758 M 29084 1 0 KCNH1 esv1705029 1 208985123 208985123 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4359644 M 2 1 0 KCNH1 HuRef nsv832503 1 209015383 209169786 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441654 M 95 1 0 KCNH1 nsv520509 1 209088410 209108213 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697461 M 2026 0 1 KCNH1 nsv945275 1 209097815 209101261 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1817102,nssv1817126,nssv1817076,nssv1817138,nssv1817079,nssv1817119,nssv1817073,nssv1817146,nssv1817152,nssv1817124,nssv1817157,nssv1817097,nssv1817151,nssv1817143,nssv1817149,nssv1817129,nssv1817086,nssv1817120,nssv1817155,nssv1817141,nssv1817080,nssv1817160,nssv1817078,nssv1817162,nssv1817087,nssv1817147,nssv1817090,nssv1817109,nssv1817075,nssv1817101,nssv1817081,nssv1817140,nssv1817092,nssv1817139,nssv1817083,nssv1817166,nssv1817100,nssv1817123,nssv1817085,nssv1817071,nssv1817091,nssv1817117,nssv1817089,nssv1817159,nssv1817084,nssv1817135,nssv1817093,nssv1817106,nssv1817088,nssv1817122,nssv1817082,nssv1817098,nssv1817153,nssv1817115,nssv1817072,nssv1817165,nssv1817156,nssv1817144,nssv1817154,nssv1817118,nssv1817150,nssv1817128,nssv1817095,nssv1817107,nssv1817099,nssv1817131,nssv1817148,nssv1817112,nssv1817077,nssv1817103,nssv1817074,nssv1817094,nssv1817125,nssv1817114,nssv1817105,nssv1817164,nssv1817127,nssv1817142,nssv1817116,nssv1817132,nssv1817130,nssv1817145,nssv1817110,nssv1817111,nssv1817108,nssv1817096,nssv1817133,nssv1817137,nssv1817113,nssv1817121,nssv1817104,nssv1817134,nssv1817158,nssv1817161,nssv1817163,nssv1817136,nssv1817167 M 97 10 0 KCNH1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4398 1 209101205 209145740 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1686 M 9 0 1 KCNH1 NA18555 nsv549124 1 209136317 209155097 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736823 M 17421 0 1 KCNH1 nsv524740 1 209209731 209222237 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700731 M 2026 0 1 KCNH1 nsv524860 1 209219319 209222237 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700864 M 2026 1 0 KCNH1 esv2570583 1 209243714 209245297 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282649 M 1 0 1 KCNH1 NA18507 nsv4410 1 209260347 209277194 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8060 M 9 0 1 KCNH1 NA12156 esv3391368 1 209286900 209286937 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863811 M 185 1 0 KCNH1 NA12005 esv2186126 1 209351674 209352018 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4658662 M 1 0 1 KCNH1 NA18507 esv3342773 1 209387232 209387242 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863812 M 185 1 0 "" NA12005 nsv945276 1 209407784 209414655 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1817199,nssv1817191,nssv1817253,nssv1817215,nssv1817173,nssv1817258,nssv1817171,nssv1817193,nssv1817254,nssv1817264,nssv1817249,nssv1817226,nssv1817183,nssv1817218,nssv1817252,nssv1817217,nssv1817174,nssv1817231,nssv1817184,nssv1817233,nssv1817177,nssv1817234,nssv1817187,nssv1817243,nssv1817180,nssv1817240,nssv1817189,nssv1817222,nssv1817246,nssv1817223,nssv1817175,nssv1817257,nssv1817176,nssv1817259,nssv1817245,nssv1817221,nssv1817179,nssv1817204,nssv1817250,nssv1817238,nssv1817172,nssv1817237,nssv1817247,nssv1817263,nssv1817186,nssv1817198,nssv1817178,nssv1817244,nssv1817181,nssv1817236,nssv1817185,nssv1817203,nssv1817188,nssv1817206,nssv1817251,nssv1817220,nssv1817190,nssv1817212,nssv1817197,nssv1817256,nssv1817182,nssv1817194,nssv1817248,nssv1817168,nssv1817192,nssv1817216,nssv1817196,nssv1817214,nssv1817170,nssv1817235,nssv1817169,nssv1817262,nssv1817261,nssv1817225,nssv1817232,nssv1817239,nssv1817202,nssv1817219,nssv1817228,nssv1817242,nssv1817241,nssv1817211,nssv1817195,nssv1817260,nssv1817224,nssv1817227,nssv1817207,nssv1817200,nssv1817229,nssv1817205,nssv1817210,nssv1817208,nssv1817201,nssv1817230,nssv1817213,nssv1817255,nssv1817209 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2456740 1 209435451 209438070 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5284468 M 1 0 1 "" NA18507 esv2052725 1 209435748 209437298 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4956011 M 1 0 1 "" NA18507 esv21988 1 209436373 209437063 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20741 M 40 0 1 "" NA18909 nsv945277 1 209444012 209449501 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1817296,nssv1818282,nssv1818267,nssv1817298,nssv1817268,nssv1817331,nssv1817270,nssv1818265,nssv1818275,nssv1818262,nssv1818270,nssv1817290,nssv1817281,nssv1817330,nssv1817284,nssv1817315,nssv1817286,nssv1818257,nssv1817280,nssv1817307,nssv1817272,nssv1817323,nssv1818268,nssv1817288,nssv1818271,nssv1817320,nssv1817285,nssv1818279,nssv1818273,nssv1817318,nssv1818266,nssv1817300,nssv1817271,nssv1818261,nssv1817273,nssv1817314,nssv1817283,nssv1817328,nssv1817269,nssv1818281,nssv1817274,nssv1818259,nssv1817278,nssv1818258,nssv1817275,nssv1818264,nssv1817282,nssv1817295,nssv1817294,nssv1818285,nssv1817287,nssv1817265,nssv1817279,nssv1818280,nssv1818274,nssv1818284,nssv1818269,nssv1818278,nssv1817293,nssv1817291,nssv1817267,nssv1817310,nssv1817289,nssv1817303,nssv1817276,nssv1817304,nssv1817277,nssv1817313,nssv1817266,nssv1817329,nssv1818272,nssv1818276,nssv1817311,nssv1817309,nssv1818277,nssv1818263,nssv1817325,nssv1817312,nssv1817317,nssv1817322,nssv1818256,nssv1817292,nssv1817321,nssv1818260,nssv1817316,nssv1817306,nssv1817301,nssv1817324,nssv1817308,nssv1817326,nssv1817302,nssv1818283,nssv1817305,nssv1817327,nssv1817297,nssv1817319,nssv1817299 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv159013 1 209516178 209520373 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177591 M 24 RCOR3 esv6409 1 209525979 209526184 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28850 M 1 0 0 RCOR3 esv2762141 1 209605308 209670466 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005389 M 1109 0 1 LINC00467,TRAF5 SW_0841 nsv508059 1 209612012 209618012 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618520 M 4 0 0 TRAF5 CHM nsv4421 1 209681062 209703759 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv489 M 9 1 0 "" NA19240 nsv945278 1 209682349 209682849 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818317,nssv1818338,nssv1818365,nssv1818323,nssv1818366,nssv1818332,nssv1818363,nssv1818327,nssv1818295,nssv1818375,nssv1818298,nssv1818318,nssv1818372,nssv1818328,nssv1818291,nssv1818335,nssv1818306,nssv1818309,nssv1818367,nssv1818329,nssv1818305,nssv1818345,nssv1818287,nssv1818359,nssv1818315,nssv1818336,nssv1818302,nssv1818378,nssv1818289,nssv1818351,nssv1818370,nssv1818286,nssv1818368,nssv1818326,nssv1818371,nssv1818322,nssv1818307,nssv1818362,nssv1818294,nssv1818343,nssv1818288,nssv1818349,nssv1818297,nssv1818348,nssv1818296,nssv1818360,nssv1818304,nssv1818331,nssv1818303,nssv1818339,nssv1818369,nssv1818361,nssv1818290,nssv1818352,nssv1818308,nssv1818325,nssv1818299,nssv1818358,nssv1818293,nssv1818316,nssv1818314,nssv1818376,nssv1818301,nssv1818357,nssv1818310,nssv1818354,nssv1818364,nssv1818347,nssv1818292,nssv1818341,nssv1818300,nssv1818355,nssv1818350,nssv1818321,nssv1818382,nssv1818320,nssv1818356,nssv1818312,nssv1818346,nssv1818377,nssv1818311,nssv1818324,nssv1818381,nssv1818319,nssv1818373,nssv1818380,nssv1818334,nssv1818374,nssv1818337,nssv1818379,nssv1818333,nssv1818344,nssv1818353,nssv1818340,nssv1818342,nssv1818313,nssv1818330 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832514 1 209696870 209861586 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441655 M 95 0 1 RD3,SLC30A1 esv3336593 1 209697352 209697650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692117 M 185 1 0 "" NA19238 esv29853 1 209722223 209723115 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16051 M 40 0 1 RD3 NA18916 esv29508 1 209753083 209753675 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19010 M 40 4 0 "" NA11993,NA11995,NA18508,NA18858 nsv549125 1 209816985 209819717 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736824 M 17421 1 0 SLC30A1 nsv826542 1 209817184 209819618 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432554 M 31 1 0 SLC30A1 NA18972 esv27192 1 209817803 209819764 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16536 M 40 0 1 SLC30A1 NA12156 dgv801n54 1 209817831 209819717 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549126,nsv549127 M 17421 0 3 SLC30A1 dgv802n54 1 209818123 209819370 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549131,nsv549128 M 17421 0 2 SLC30A1 nsv549129 1 209818123 209819717 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736830,nssv736829 M 17421 2 0 SLC30A1 dgv803n54 1 209818226 209819717 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549132,nsv549136,nsv549135,nsv549138,nsv549130,nsv549134,nsv549133 M 17421 0 9 SLC30A1 nsv549137 1 209818670 209818844 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736840 M 17421 0 1 SLC30A1 esv1631560 1 209849068 209849068 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3818210 M 2 1 0 "" HuRef nsv1010919 1 209870875 209889696 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493385 M 29084 1 0 "" nsv478639 1 209887877 209887877 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019912 M 9 1 0 "" NA18507 nsv945280 1 209900171 209902826 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818412,nssv1818459,nssv1818393,nssv1818434,nssv1818463,nssv1818427,nssv1818414,nssv1818457,nssv1818389,nssv1818437,nssv1818388,nssv1818439,nssv1817640,nssv1818454,nssv1818403,nssv1817652,nssv1818464,nssv1818425,nssv1818399,nssv1818424,nssv1818402,nssv1817651,nssv1818461,nssv1818406,nssv1817643,nssv1818446,nssv1818384,nssv1818432,nssv1818386,nssv1818442,nssv1818460,nssv1818456,nssv1818404,nssv1818415,nssv1818391,nssv1818426,nssv1818394,nssv1818429,nssv1818401,nssv1818433,nssv1818400,nssv1818435,nssv1818392,nssv1818419,nssv1818387,nssv1818383,nssv1818385,nssv1818448,nssv1817642,nssv1817648,nssv1818462,nssv1817645,nssv1818411,nssv1818413,nssv1817641,nssv1818444,nssv1818405,nssv1818445,nssv1818395,nssv1818458,nssv1818396,nssv1818417,nssv1817644,nssv1818428,nssv1818397,nssv1818438,nssv1818407,nssv1818455,nssv1818390,nssv1818436,nssv1818398,nssv1817650,nssv1818408,nssv1818451,nssv1818423,nssv1817649,nssv1818409,nssv1817654,nssv1818449,nssv1817653,nssv1818422,nssv1818420,nssv1818452,nssv1818453,nssv1818440,nssv1818418,nssv1818447,nssv1817647,nssv1818421,nssv1818431,nssv1818430,nssv1818441,nssv1818443,nssv1817646,nssv1818410,nssv1818450,nssv1818416 M 97 10 0 NEK2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv826553 1 210024882 210025646 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1426438 M 31 0 1 LPGAT1 AK6 esv3440536 1 210032313 210032358 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673895,essv8673896,essv8673894,essv8673893 M 185 4 0 LPGAT1 NA12878,NA12891,NA12892,NA19240 esv3418118 1 210045066 210045090 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863813 M 185 1 0 LPGAT1 NA12005 esv2240640 1 210085925 210086359 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4888380 M 1 0 1 "" NA18507 nsv506978 1 210102912 210108912 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617550,nssv620677 M 4 0 0 "" CHM,NA15510 esv2762218 1 210113070 210154305 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006973 M 1109 1 0 "" RW_0258 nsv4432 1 210269784 210302969 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8070 M 9 1 0 DTL,INTS7 NA12156 nsv506979 1 210286223 210292223 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619261 M 4 0 0 DTL NA10860 nsv945281 1 210290295 210291973 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1817686,nssv1817717,nssv1817660,nssv1817743,nssv1817739,nssv1817719,nssv1817741,nssv1817700,nssv1817671,nssv1817715,nssv1817736,nssv1817722,nssv1817667,nssv1817689,nssv1817734,nssv1817742,nssv1817740,nssv1817716,nssv1817666,nssv1817698,nssv1817668,nssv1817711,nssv1817674,nssv1817699,nssv1817676,nssv1817712,nssv1817662,nssv1817697,nssv1817656,nssv1817709,nssv1817684,nssv1817706,nssv1817732,nssv1817728,nssv1817663,nssv1817692,nssv1817670,nssv1817682,nssv1817673,nssv1817704,nssv1817659,nssv1817696,nssv1817672,nssv1817729,nssv1817733,nssv1817687,nssv1817658,nssv1817695,nssv1817735,nssv1817694,nssv1817677,nssv1817749,nssv1817669,nssv1817691,nssv1817661,nssv1817690,nssv1817738,nssv1817748,nssv1817679,nssv1817726,nssv1817657,nssv1817713,nssv1817683,nssv1817705,nssv1817664,nssv1817707,nssv1817665,nssv1817678,nssv1817675,nssv1817714,nssv1817737,nssv1817710,nssv1817745,nssv1817727,nssv1817731,nssv1817747,nssv1817655,nssv1817685,nssv1817721,nssv1817720,nssv1817718,nssv1817680,nssv1817688,nssv1817723,nssv1817751,nssv1817750,nssv1817744,nssv1817746,nssv1817703,nssv1817724,nssv1817708,nssv1817701,nssv1817693,nssv1817681,nssv1817702,nssv1817725,nssv1817730 M 97 10 0 DTL HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv506980 1 210366646 210372646 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623292,nssv620678 M 4 0 0 "" NA15510,NA18994 nsv4443 1 210396629 210431559 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3738 M 9 1 0 "" NA12878 nsv549139 1 210398917 210943525 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736842 M 17421 1 0 ATF3,BATF3,FAM71A,NENF,PPP2R5A,SNORA16B,TMEM206 nsv518153 1 210411384 210411915 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695574 M 2026 0 1 "" esv987786 1 210426517 210426517 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580165 M 3 1 0 "" HuRef esv997899 1 210483532 210483934 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573417 M 3 0 1 "" HuRef esv2461437 1 210502782 210504383 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5384663 M 1 0 1 "" NA18507 nsv549140 1 210524940 210525880 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736843 M 17421 0 1 PPP2R5A dgv804n54 1 210524940 210526186 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549143,nsv549141,nsv549146 M 17421 0 4 PPP2R5A dgv805n54 1 210524940 210526246 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549142,nsv549144 M 17421 6 2 PPP2R5A esv27948 1 210524948 210526725 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18594 M 40 0 1 PPP2R5A NA12156 dgv806n54 1 210525165 210526246 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549147,nsv549145 M 17421 5 0 PPP2R5A esv2464712 1 210537031 210540028 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5205300 M 1 0 1 PPP2R5A NA18507 esv7385 1 210537527 210539486 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29826 M 1 0 0 PPP2R5A nsv511729 1 210537535 210539583 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626373 M 1 0 1 PPP2R5A 1 esv2411059 1 210537566 210539442 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4528478 M 1 0 1 PPP2R5A NA18507 dgv7n6 1 210537759 210539257 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159922,nsv160540 M 24 PPP2R5A esv990359 1 210537761 210539241 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573051 M 3 0 1 PPP2R5A HuRef esv1467950 1 210537776 210539257 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4350749 M 2 0 1 PPP2R5A HuRef nsv945282 1 210542360 210549355 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1817754,nssv1817814,nssv1817833,nssv1817790,nssv1817767,nssv1817827,nssv1817838,nssv1817798,nssv1817763,nssv1817812,nssv1817768,nssv2605203,nssv1817758,nssv1817816,nssv1817829,nssv1817806,nssv1817757,nssv1817811,nssv1817837,nssv1817813,nssv1817773,nssv1817840,nssv1817836,nssv1817809,nssv1817771,nssv1817795,nssv1817759,nssv1817794,nssv1817760,nssv1817808,nssv1817753,nssv1817803,nssv1817770,nssv1817796,nssv1817772,nssv1817819,nssv1817783,nssv1817779,nssv1817756,nssv1817826,nssv1817769,nssv1817846,nssv1817781,nssv1817784,nssv1817765,nssv1817825,nssv1817832,nssv1817822,nssv1817774,nssv1817802,nssv1817766,nssv1817823,nssv1817830,nssv1817801,nssv1817755,nssv1817845,nssv1817835,nssv1817788,nssv1817834,nssv1817839,nssv1817761,nssv1817810,nssv1817764,nssv1817791,nssv1817776,nssv1817797,nssv1817780,nssv1817828,nssv1817831,nssv1817793,nssv1817762,nssv1817804,nssv1817777,nssv1817775,nssv1817789,nssv1817787,nssv1817792,nssv1817817,nssv1817807,nssv1817815,nssv1817842,nssv1817844,nssv1817848,nssv1817752,nssv1817818,nssv1817786,nssv1817800,nssv1817841,nssv1817778,nssv1817821,nssv1817824,nssv1817820,nssv1817843,nssv1817785,nssv1817799,nssv1817847,nssv1817805,nssv1817782 M 97 10 0 PPP2R5A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4454 1 210550936 210582215 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6144 M 9 1 0 PPP2R5A NA12156 esv3418305 1 210616752 210618050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692118 M 185 1 0 TMEM206 NA19239 esv6419 1 210637839 210638009 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28860 M 1 0 0 TMEM206 esv3415613 1 210648852 210650250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692120 M 185 1 0 TMEM206 NA19239 nsv527863 1 210684046 210767241 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704361 M 2026 0 1 NENF nsv945283 1 210687792 210689177 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1817929,nssv1817943,nssv1817869,nssv1817896,nssv1817926,nssv1817940,nssv1817931,nssv1817879,nssv1817934,nssv1817882,nssv1817854,nssv1817938,nssv1817859,nssv1817945,nssv1817930,nssv1817909,nssv1817935,nssv1817906,nssv1817933,nssv1817875,nssv1817858,nssv1817911,nssv1817860,nssv1817910,nssv1817868,nssv1817918,nssv1817865,nssv1817937,nssv1817861,nssv1817944,nssv1817870,nssv1817908,nssv1817856,nssv1817919,nssv1817857,nssv1817903,nssv1817850,nssv1817913,nssv1817853,nssv1817876,nssv1817855,nssv1817916,nssv1817867,nssv1817905,nssv1817864,nssv1817900,nssv1817866,nssv1817895,nssv1817851,nssv1817892,nssv1817862,nssv1817924,nssv1817878,nssv1817891,nssv1817871,nssv1817897,nssv1817852,nssv1817872,nssv1817880,nssv1817885,nssv1817927,nssv1817923,nssv1817877,nssv1817887,nssv1817863,nssv1817907,nssv1817873,nssv1817893,nssv1817932,nssv1817922,nssv1817928,nssv1817899,nssv1817898,nssv1817925,nssv1817881,nssv1817936,nssv1817920,nssv1817914,nssv1817942,nssv1817912,nssv1817890,nssv1817894,nssv1817888,nssv1817941,nssv1817904,nssv1817849,nssv1817917,nssv1817921,nssv1817889,nssv1817886,nssv1817915,nssv1817939,nssv1817874,nssv1817901,nssv1817883,nssv1817884,nssv1817902 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv524329 1 210698016 210701206 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700235 M 2026 0 1 "" nsv519924 1 210698016 210705348 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697130 M 2026 0 1 "" esv2541393 1 210708275 210709126 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5237539 M 1 1 0 "" NA18507 nsv512756 1 210708308 210708636 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625385 M 1 1 0 "" 1 esv2758996 1 210714766 210909726 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757770 M 270 0 1 ATF3,FAM71A NA18552 nsv8780 1 210722258 210725381 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21085 M 31 0 1 "" NA18980 esv9006 1 210766559 210770545 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31447 M 1 0 0 "" esv28337 1 210789659 210790215 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13409 M 40 0 1 "" NA06985 esv3394920 1 210832448 210832467 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598025 M 185 1 0 ATF3 NA12873 nsv4465 1 210905333 210939038 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv499 M 9 1 0 BATF3 NA19240 nsv160457 1 210913883 210921385 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179035 M 24 "" nsv549148 1 210943525 211028830 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736861 M 17421 0 1 NSL1 esv3390746 1 210957658 210957680 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902865,essv8902866 M 185 2 0 "" NA18858,NA19257 esv3307825 1 210957659 210957660 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7750500,essv7746621 M 185 2 0 "" NA18858,NA19257 esv1096110 1 210965014 210965014 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4264638 M 2 1 0 "" HuRef nsv1005983 1 210984154 211014144 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501958 M 29084 1 0 NSL1 esv2758997 1 210992052 211073020 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756884 M 270 0 1 C1orf227,NSL1,TATDN3 NA12740 nsv159271 1 210992869 210994734 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177849 M 24 NSL1 nsv1010003 1 211010863 211053619 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489718 M 29084 1 0 NSL1,TATDN3 nsv947467 1 211021462 211024571 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2757464 M 97 1 0 NSL1 HGDP00998 dgv807n54 1 211064008 211078435 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549149,nsv549150 M 17421 0 2 C1orf227 nsv508691 1 211064942 211095015 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617401 M 4 0 1 C1orf227 CHM esv3891104 1 211066324 211078434 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797075,essv25796636,essv25796665,essv25797564,essv25797117,essv25797064 M 3017 0 6 C1orf227 dgv808n54 1 211068711 211074850 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549159,nsv549158,nsv549152,nsv549151,nsv549153 M 17421 0 7 C1orf227 dgv809n54 1 211068711 211076280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549160,nsv549161,nsv549155,nsv549154 M 17421 0 19 C1orf227 esv2421907 1 211068711 211077059 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5016501,essv5011011,essv5137626,essv5135387,essv5044540,essv5049664,essv5123496,essv5108205,essv5131961,essv5125112,essv5052772,essv5117715,essv5116268,essv5073220,essv5066977,essv5151442,essv5055374,essv5040712,essv5020163,essv5008320,essv5062602,essv5031168,essv5084565,essv5040857,essv5023169,essv5150774,essv5137221,essv5003792,essv5019254,essv5138157,essv5055167,essv5057857,essv5068918,essv5038406,essv5091653,essv5012922,essv5111662,essv5074761,essv5028301,essv5159835,essv5040538,essv5092253,essv5068226,essv5084906,essv5128204,essv5109254,essv5046544,essv5153876,essv5020490 M 1184 0 49 C1orf227 NA07346,NA07347,NA07349,NA10838,NA10847,NA10850,NA10863,NA10865,NA11892,NA11920,NA12146,NA12234,NA12275,NA12740,NA12750,NA12753,NA12763,NA18114,NA18128,NA18159,NA18160,NA18537,NA18548,NA18622,NA18952,NA18973,NA18990,NA18993,NA19000,NA19681,NA19683,NA20300,NA20347,NA20363,NA20512,NA20530,NA20538,NA20581,NA20757,NA20775,NA20799,NA20890,NA21116,NA21318,NA21400,NA21597,NA21634,NA21647,NA21650 dgv810n54 1 211068711 211078435 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549162,nsv549156 M 17421 0 18 C1orf227 dgv811n54 1 211068711 211084748 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549169,nsv549163,nsv549175,nsv549157 M 17421 0 11 C1orf227 esv3891115 1 211068711 211097780 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796216 M 3017 0 1 C1orf227,FLVCR1-AS1 nsv8791 1 211068720 211081467 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21755,nssv22086,nssv22089,nssv22753 M 31 0 4 C1orf227 NA10847,NA10863,NA12740,NA18537 nsv826564 1 211068855 211080188 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1439504,nssv1438625 M 31 0 2 C1orf227 NA18537,NA18973 esv2763825 1 211071078 211081076 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005434,essv7005489,essv7005500,essv7005511,essv7005478,essv7005400,essv7005456,essv7005423,essv7005445,essv7005523,essv7005467,essv7005412 M 1109 0 12 C1orf227 SW_0058,SW_0189,SW_0197,SW_0757,SW_0760,SW_0890,SW_1113,SW_1156,SW_1198,SW_1209,SW_1469,SW_1470 esv24713 1 211071486 211079763 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10902 M 40 0 1 C1orf227 NA12004 nsv514041 1 211071616 211076992 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857825,nssv2857827,nssv2857808,nssv2857830,nssv2857817,nssv2857832,nssv2857810,nssv2857829,nssv2857812,nssv2857831,nssv2857818,nssv2857828,nssv2857824,nssv2857809,nssv2857822,nssv2857811,nssv2857823,nssv2857826,nssv2857821,nssv2857815,nssv2857819,nssv2857813,nssv2857820,nssv2857814,nssv2857816 M 2366 0 25 C1orf227 NA07346,NA07347,NA07349,NA10838,NA10847,NA10850,NA10863,NA11892,NA11920,NA12004,NA12146,NA12234,NA12275,NA12740,NA12750,NA12753,NA12763,NA18537,NA18622,NA18952,NA18973,NA18990,NA19000,NA21400,NA21634 dgv812n54 1 211071635 211074850 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549164,nsv549165 M 17421 0 3 C1orf227 dgv813n54 1 211071635 211076280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549167,nsv549166,nsv549170 M 17421 0 5 C1orf227 dgv814n54 1 211071635 211078435 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549168,nsv549172,nsv549173 M 17421 0 3 C1orf227 nsv441735 1 211071638 211077059 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656877,nssv1656874,nssv1656868,nssv1656865,nssv1656872,nssv1656873,nssv1656879,nssv1656870,nssv1656869,nssv1656878,nssv1656875,nssv1656866,nssv1656864,nssv1656867,nssv1656871,nssv1656876,nssv1656880 M 270 0 17 C1orf227 NA10838,NA10847,NA10863,NA12004,NA12146,NA12234,NA12740,NA12750,NA12753,NA12763,NA18537,NA18540,NA18622,NA18952,NA18973,NA18990,NA19000 dgv571n100 1 211071788 211136186 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011186,nsv1013705 M 29084 2 0 C1orf227,FLVCR1,FLVCR1-AS1 dgv815n54 1 211072500 211076280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549171,nsv549176,nsv549174 M 17421 0 3 C1orf227 esv32562 1 211072687 211076120 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93958 M 51 0 1 C1orf227 21634 nsv549177 1 211074088 211076280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736933 M 17421 0 1 C1orf227 nsv1008383 1 211092169 211181517 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495949 M 29084 1 0 FLVCR1,FLVCR1-AS1 dgv572n100 1 211096437 211139636 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998979,nsv998261 M 29084 2 0 FLVCR1,FLVCR1-AS1 nsv1007129 1 211103867 211149884 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492371 M 29084 1 0 FLVCR1 esv1413001 1 211105861 211106030 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4068619 M 2 0 1 FLVCR1 HuRef dgv99n67 1 211107512 211108982 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826575,nsv826587 M 31 0 2 FLVCR1 NA18526,NA18542 esv1000808 1 211149963 211154069 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564326 M 3 0 1 "" HuRef nsv511730 1 211150399 211153269 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626374 M 1 0 1 "" 1 esv29349 1 211198204 211222650 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11434 M 40 1 0 VASH2 NA07045 esv3307325 1 211203526 211203527 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7789694,essv7809138,essv7817402,essv7835024,essv7771455,essv7785328,essv7778821,essv7823268,essv7832940,essv7792441,essv7786457,essv7818270,essv7775186 M 185 13 0 VASH2 NA07051,NA07346,NA12043,NA18498,NA18517,NA18522,NA18523,NA18853,NA18909,NA18912,NA18916,NA19099,NA19129 nsv508692 1 211375659 211397530 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620148 M 4 0 1 RPS6KC1 NA15510 esv28931 1 211381194 211386747 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14011 M 40 0 1 RPS6KC1 NA15510 nsv549178 1 211382712 211386222 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736934 M 17421 0 1 RPS6KC1 esv1004277 1 211382751 211384818 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586984 M 3 1 0 RPS6KC1 HuRef dgv573n100 1 211437750 211494644 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001201,nsv1012014 M 29084 2 0 RPS6KC1 nsv826598 1 211444740 211453916 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430392 M 31 0 1 RPS6KC1 AK16 esv275574 1 211449295 211460223 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585417,essv2585910 M 1250 1 1 RPS6KC1 nsv4476 1 211452352 211485460 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4941 M 9 1 0 RPS6KC1 NA19129 nsv508693 1 211472843 211488249 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620149 M 4 0 1 RPS6KC1 NA15510 nsv832525 1 211647099 211849438 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441656 M 95 1 0 "" nsv4487 1 211655194 211688274 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8083 M 9 1 0 "" NA12156 esv8096 1 211685330 211685495 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30537 M 1 0 0 "" esv3426773 1 211700372 211700389 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863815,essv7863814 M 185 2 0 "" NA12005,NA18871 nsv524186 1 211704106 211708566 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700068 M 2026 0 1 "" nsv526119 1 211704106 211718771 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702369 M 2026 0 1 "" nsv549179 1 211708566 211741355 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736935 M 17421 0 1 "" nsv520354 1 211712467 211718771 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv663143,nssv677840,nssv679184,nssv677183 M 2026 0 4 "" nsv526718 1 211718771 211721202 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703058 M 2026 0 1 "" esv3891126 1 211721202 211971965 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788981 M 3017 1 0 "" esv2443395 1 211780964 211781159 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5220691 M 1 1 0 "" NA18507 esv1564394 1 211781124 211781124 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3758985 M 2 1 0 "" HuRef nsv826609 1 211967693 211969579 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437267 M 31 0 1 "" NA18949 nsv472742 1 211991435 211991435 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018355 M 9 1 0 "" NA18555 nsv472971 1 212002842 212002842 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012579 M 9 1 0 "" NA19129 nsv476220 1 212019363 212019363 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018270 M 9 1 0 "" NA12878 esv3412257 1 212030968 212030968 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825094 M 185 1 0 "" NA19240 esv275485 1 212070341 212080759 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585275 M 1250 0 1 "" nsv472859 1 212103818 212103818 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015957 M 9 1 0 "" NA18555 nsv478400 1 212130239 212130239 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018499 M 9 1 0 "" NA18507 nsv4498 1 212221429 212256185 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3747 M 9 1 0 PROX1 NA12878 nsv516687 1 212625281 212626674 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv658406,nssv691566,nssv693734,nssv681847,nssv687122,nssv658990,nssv687846,nssv670154,nssv678447 M 2026 0 9 PTPN14 esv275028 1 212704431 212705876 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585496 M 1250 0 1 PTPN14 nsv468094 1 212721588 212754348 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543227 M 1557 0 1 PTPN14 HGDP00807 nsv549180 1 212721588 212754348 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174043 M 17421 0 1 PTPN14 HGDP00807 nsv945284 1 212722216 212723427 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818593,nssv1818650,nssv1818591,nssv1818626,nssv1818646,nssv1818652,nssv1818642,nssv1818628,nssv1818574,nssv1818596,nssv1818570,nssv1818631,nssv1818578,nssv1818589,nssv1818567,nssv1818632,nssv1818648,nssv1818604,nssv1818643,nssv1818613,nssv1818568,nssv1818619,nssv1818576,nssv1818629,nssv1818581,nssv1818595,nssv1818571,nssv1818609,nssv1818582,nssv1818606,nssv1818644,nssv1818594,nssv1818639,nssv1818636,nssv1818641,nssv1818656,nssv1818572,nssv1818621,nssv1818583,nssv1818622,nssv1818580,nssv1818585,nssv1818579,nssv1818635,nssv1818640,nssv1818638,nssv1818565,nssv1818649,nssv1818647,nssv1818633,nssv1818573,nssv1818655,nssv1818569,nssv1818616,nssv1818566,nssv1818618,nssv1818584,nssv1818592,nssv1818564,nssv1818603,nssv1818575,nssv1818634,nssv1818590,nssv1818611,nssv1817947,nssv1818612,nssv1818577,nssv1818623,nssv1818586,nssv1818598,nssv1818645,nssv1818627,nssv1818658,nssv1818608,nssv1818605,nssv1818624,nssv1818587,nssv1818654,nssv1818602,nssv1818637,nssv1818651,nssv1818614,nssv1818617,nssv1818600,nssv1818657,nssv1818588,nssv1818653,nssv1818615,nssv1818630,nssv1818607,nssv1818610,nssv1818599,nssv1818625,nssv1818620,nssv1817946,nssv1818601,nssv1818597 M 97 10 0 PTPN14 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945285 1 212771950 212773977 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818674,nssv1818721,nssv1818739,nssv1818703,nssv1818661,nssv1818725,nssv1818673,nssv1818713,nssv1818744,nssv1818717,nssv1818664,nssv1818728,nssv1818741,nssv1818729,nssv1818670,nssv1818699,nssv1818745,nssv1818707,nssv1818660,nssv1818734,nssv1818668,nssv1818747,nssv1818665,nssv1818754,nssv1818738,nssv1818686,nssv1818688,nssv1818694,nssv1818675,nssv1818716,nssv1818679,nssv1818726,nssv1818743,nssv1818706,nssv1818690,nssv1818718,nssv1818667,nssv1818710,nssv1818740,nssv1818723,nssv1818680,nssv1818749,nssv1818671,nssv1818693,nssv1818677,nssv1818753,nssv1818676,nssv1818697,nssv1818666,nssv1818719,nssv1818678,nssv1818692,nssv1818663,nssv1818682,nssv1818669,nssv1818733,nssv1818662,nssv1818691,nssv1818681,nssv1818696,nssv1818687,nssv1818715,nssv1818736,nssv1818698,nssv1818737,nssv1818748,nssv1818672,nssv1818752,nssv1818683,nssv1818730,nssv1818742,nssv1818732,nssv1818701,nssv1818684,nssv1818735,nssv1818659,nssv1818700,nssv1818720,nssv1818689,nssv1818751,nssv1818722,nssv1818755,nssv1818724,nssv1818709,nssv1818695,nssv1818705,nssv1818702,nssv1818708,nssv1818750,nssv1818731,nssv1818712,nssv1818714,nssv1818704,nssv1818727,nssv1818711,nssv1818685,nssv1818746 M 97 10 0 PTPN14 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv574n100 1 212830401 213079998 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005669,nsv1002937,nsv997864,nsv1004475 M 29084 4 0 CENPF esv988434 1 212836026 212837154 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563727 M 3 0 1 "" HuRef esv29119 1 212840830 212845386 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10993 M 40 0 1 CENPF NA12489 esv27146 1 212845464 212849199 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14763 M 40 2 1 CENPF NA12156,NA12239,NA19108 nsv549181 1 212846832 212849115 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736936 M 17421 0 1 CENPF esv2145066 1 212862582 212862923 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4507931 M 1 0 1 CENPF NA18507 nsv160230 1 212862800 212862889 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178808 M 24 CENPF esv1007536 1 212865341 212870052 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564331 M 3 1 0 CENPF HuRef nsv436780 1 212889557 212889975 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465877 M 2 1 0 CENPF NA18505 esv3330504 1 212919590 212919596 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863817,essv7863816 M 185 2 0 "" NA11992,NA18520 esv2421770 1 212919913 212922145 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5026918,essv5003870,essv5135537,essv5109430,essv5145579,essv5045968,essv5090777,essv5097267,essv5045997,essv5115542,essv5041543,essv5145192,essv5067333 M 1184 0 13 "" NA18870,NA18872,NA18916,NA18924,NA18925,NA18930,NA19113,NA19115,NA19200,NA19316,NA19445,NA19449,NA20342 nsv441736 1 212919913 212922145 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656882,nssv1656883,nssv1656881 M 270 0 3 "" NA18870,NA18872,NA19200 esv26357 1 212919939 212923503 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12466 M 40 0 1 "" NA18916 nsv514042 1 212920048 212921920 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857837,nssv2857834,nssv2857835,nssv2857833,nssv2857840,nssv2857839,nssv2857838,nssv2857841,nssv2857836 M 2366 0 9 "" NA18870,NA18872,NA18916,NA18924,NA18925,NA18930,NA19113,NA19115,NA19200 esv3358292 1 212977623 212977637 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673899,essv8673897 M 185 2 0 "" NA19238,NA19240 esv3403626 1 212977626 212977645 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598058,essv9598047,essv9598069 M 185 3 0 "" NA11894,NA19141,NA19143 esv3437512 1 212977628 212977639 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902918,essv8902898,essv8902915,essv8902901,essv8902886,essv8902906,essv8902913,essv8902885,essv8902897,essv8902905,essv8902900,essv8902882,essv8902889,essv8902908,essv8902909,essv8902896,essv8902902,essv8902894,essv8902887,essv8902904,essv8902890,essv8902895,essv8902917,essv8902888,essv8902883,essv8902912,essv8902910,essv8902899,essv8902911,essv8902916,essv8902884,essv8902893,essv8902907 M 185 33 0 "" NA06986,NA11894,NA11995,NA12044,NA18498,NA18499,NA18502,NA18508,NA18511,NA18516,NA18519,NA18520,NA18522,NA18523,NA18856,NA18858,NA18861,NA18870,NA18907,NA18909,NA18912,NA19099,NA19108,NA19114,NA19116,NA19129,NA19137,NA19138,NA19147,NA19172,NA19190,NA19210,NA19257 nsv4509 1 213010527 213042553 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv518 M 9 1 0 "" NA19240 esv1007585 1 213029596 213033324 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564754 M 3 0 1 "" HuRef nsv523081 1 213066142 213073562 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698772 M 2026 0 1 "" esv1482541 1 213074070 213074070 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3982560 M 2 1 0 "" HuRef esv8885 1 213074990 213075168 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31326 M 1 0 0 "" nsv945286 1 213110451 213113041 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816780,nssv1816766,nssv1816785,nssv1816726,nssv1816728,nssv1816768,nssv1816783,nssv1816760,nssv1816779,nssv1816736,nssv1816720,nssv1816755,nssv1816718,nssv1816742,nssv1818766,nssv1816793,nssv1818772,nssv1816738,nssv1818761,nssv1816733,nssv1816730,nssv1816770,nssv1818764,nssv1816771,nssv1818760,nssv1816761,nssv1818763,nssv1816750,nssv1816717,nssv1816757,nssv1816782,nssv1816749,nssv1818768,nssv1816754,nssv1816716,nssv1816739,nssv1818758,nssv1816773,nssv1816721,nssv1816744,nssv1818757,nssv1816765,nssv1816719,nssv1816764,nssv1816781,nssv1816794,nssv1816723,nssv1816731,nssv1816778,nssv1816732,nssv1816727,nssv1816741,nssv1818770,nssv1816789,nssv1816776,nssv1816786,nssv1818759,nssv1816758,nssv1816777,nssv1816748,nssv1818765,nssv1816792,nssv1818762,nssv1816724,nssv1818769,nssv1816769,nssv1818767,nssv1816759,nssv1816784,nssv1816751,nssv1818771,nssv1816752,nssv1816762,nssv1816735,nssv1816795,nssv1816790,nssv1816740,nssv1816788,nssv1816737,nssv1816767,nssv1816747,nssv1816775,nssv1816734,nssv1816722,nssv1816729,nssv1816774,nssv1816791,nssv1816745,nssv1816763,nssv1816753,nssv1818756,nssv1816746,nssv1816725,nssv1816743,nssv1816756,nssv1816787,nssv1816772 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4521 1 213144586 213178019 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2771 M 9 1 0 MIR548F3 NA18555 nsv549182 1 213233859 213315040 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736937 M 17421 0 1 KCNK2,MIR548F3 esv3360711 1 213299116 213299142 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863818 M 185 1 0 KCNK2,MIR548F3 NA18522 nsv160908 1 213333691 213333750 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179486 M 24 KCNK2,MIR548F3 esv1046148 1 213333763 213333826 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3661406 M 2 0 1 KCNK2,MIR548F3 HuRef esv3398251 1 213351892 213351911 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598080 M 185 1 0 KCNK2 NA19143 esv3421442 1 213351899 213351913 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902951,essv8902943,essv8902923,essv8902938,essv8902937,essv8902924,essv8902944,essv8902933,essv8902928,essv8902952,essv8902931,essv8902945,essv8902948,essv8902926,essv8902929,essv8902919,essv8902953,essv8902927,essv8902922,essv8902935,essv8902920,essv8902950,essv8902942,essv8902949,essv8902921,essv8902930,essv8902946,essv8902939,essv8902932,essv8902941,essv8902934,essv8902940 M 185 32 0 KCNK2 NA06986,NA12717,NA12750,NA12763,NA12828,NA18489,NA18498,NA18502,NA18504,NA18508,NA18510,NA18511,NA18516,NA18517,NA18519,NA18522,NA18853,NA18858,NA18861,NA18871,NA18907,NA18916,NA19093,NA19102,NA19114,NA19116,NA19137,NA19138,NA19172,NA19210,NA19225,NA19257 esv3307846 1 213351900 213351901 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7792990,essv7777801,essv7778799,essv7779444,essv7804364,essv7805818,essv7808447,essv7786392,essv7806331,essv7832702,essv7792050,essv7823316,essv7806930,essv7805295,essv7819926,essv7816118,essv7814104,essv7829804,essv7813969,essv7781158,essv7826229,essv7825516,essv7836316,essv7803838,essv7771564,essv7816446,essv7801579,essv7811353,essv7789683,essv7828089,essv7788847,essv7832055,essv7798753 M 185 33 0 KCNK2 NA06986,NA12717,NA12750,NA12763,NA12828,NA18489,NA18498,NA18502,NA18504,NA18508,NA18510,NA18511,NA18516,NA18517,NA18519,NA18522,NA18853,NA18858,NA18861,NA18871,NA18907,NA18916,NA19093,NA19102,NA19114,NA19116,NA19137,NA19138,NA19143,NA19172,NA19225,NA19238,NA19257 esv3337050 1 213351908 213351924 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673900 M 185 1 0 KCNK2 NA19238 esv3308609 1 213351913 213351914 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838054,essv7837426,essv7838218,essv7837752 M 185 4 0 KCNK2 NA12878,NA12891,NA12892,NA19240 esv2760086 1 213437193 213447888 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006975,essv7006979,essv7006974,essv7006976,essv7006977 M 1109 0 5 KCNK2 RW_0006,RW_0047,RW_0071,RW_0105,RW_0148 esv1227395 1 213449512 213449512 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4359143 M 2 1 0 KCNK2 HuRef dgv24n21 1 213463166 213468645 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv518732,nsv527715 M 2026 0 2 KCNK2 esv3388970 1 213467540 213467559 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598091 M 185 1 0 KCNK2 NA12287 esv1008393 1 213493555 213495746 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563956 M 3 0 1 "" HuRef nsv4532 1 213509281 213531850 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3756 M 9 1 0 "" NA12878 dgv575n100 1 213519909 213596370 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003660,nsv1014878 M 29084 0 2 "" esv4176 1 213558856 213567706 CNV loss Wang_et_al_2008 18987735 Sequencing essv26617 M 1 0 1 "" YH nsv826620 1 213558859 213563020 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1430393,nssv1422415,nssv1436387,nssv1424005,nssv1431123 M 31 0 5 "" AK16,AK18,NA18542,NA18552,NA18582 esv2422168 1 213560092 213565727 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5038865,essv5109503,essv5121675,essv5154180,essv5042025,essv5087950,essv5143760,essv5019574,essv5057239,essv5135954,essv5138969,essv5064445,essv5133166,essv5105830,essv5051991,essv5143184,essv5131348,essv5154125,essv5013465,essv5122184,essv5010542,essv5021041,essv5016349,essv5075341,essv5007822,essv5003060,essv5071405,essv5065625,essv5113438,essv5117562,essv5112971,essv5041946,essv5056641,essv5139991,essv5078615,essv5119005,essv5117978,essv5010967,essv5158566,essv5094018,essv5142373,essv5144844,essv5143458,essv5098509,essv5029069,essv5105889,essv5121835,essv5150424,essv5160653,essv5015482,essv5027015,essv5152799,essv5129430,essv5055050,essv5102022,essv5069777,essv5044013,essv5080001,essv5011784,essv5146980,essv5157670,essv5145455,essv5146292,essv5014277,essv5098153,essv5006066,essv5153728,essv5034767,essv5044532 M 1184 0 69 "" NA07357,NA12832,NA12842,NA17968,NA17974,NA17981,NA17986,NA17995,NA17998,NA18102,NA18108,NA18128,NA18134,NA18140,NA18146,NA18147,NA18148,NA18149,NA18153,NA18160,NA18161,NA18542,NA18546,NA18552,NA18571,NA18582,NA18593,NA18596,NA18602,NA18611,NA18623,NA18626,NA18628,NA18637,NA18638,NA18643,NA18645,NA18670,NA18689,NA18694,NA18954,NA18963,NA19007,NA19058,NA19065,NA19081,NA19649,NA19651,NA19652,NA19654,NA19661,NA19662,NA19663,NA19685,NA19722,NA19725,NA19747,NA19770,NA19772,NA19783,NA19784,NA19788,NA20539,NA20542,NA20772,NA20783,NA20787,NA20790,NA21107 esv2762151 1 213560092 213565727 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005534 M 1109 0 1 "" SW_0646 nsv442576 1 213560092 213565727 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619664,nssv1619658,nssv1619661,nssv1619663,nssv1619667,nssv1619660,nssv1619665,nssv1619659,nssv1619668,nssv1619666,nssv1619662 M 270 0 11 "" NA07357,NA18540,NA18542,NA18552,NA18571,NA18582,NA18593,NA18611,NA18623,NA18637,NA19007 nsv514043 1 213560400 213562880 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857847,nssv2857852,nssv2857850,nssv2857848,nssv2857844,nssv2857842,nssv2857849,nssv2857851,nssv2857845,nssv2857846,nssv2857843 M 2366 0 11 "" NA07357,NA12832,NA12842,NA18542,NA18552,NA18571,NA18582,NA18593,NA18611,NA18637,NA19007 nsv1009296 1 213564775 213586746 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705509 M 29084 0 1 "" nsv832537 1 213575649 213771728 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441657 M 95 0 1 "" esv9170 1 213605820 213606005 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31611 M 1 0 0 "" nsv945288 1 213739087 213739822 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816832,nssv1816830,nssv2605211,nssv1816835,nssv2605208,nssv1816834,nssv1816833,nssv1816837,nssv2605204,nssv2605209,nssv1816838,nssv2605210,nssv2605213,nssv2605205,nssv1816828,nssv2605206,nssv1816829,nssv1816831,nssv1816836,nssv2605212,nssv2605207 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4543 1 213780044 213802218 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv527,nssv4958 M 9 2 0 "" NA19129,NA19240 esv23405 1 213915859 213918386 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11246 M 40 0 1 USH2A NA18508 esv2763680 1 213922506 213937306 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005622,essv7005611,essv7005578,essv7005567,essv7005556,essv7005600,essv7005545,essv7005634,essv7005589 M 1109 0 9 USH2A SW_0147,SW_0215,SW_0678,SW_0844,SW_0871,SW_1088,SW_1149,SW_1165,SW_1243 nsv549183 1 213927087 213928380 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736940,nssv736938,nssv736939 M 17421 0 3 USH2A dgv816n54 1 213927087 213930201 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549185,nsv549184 M 17421 0 2 USH2A dgv817n54 1 213927679 213928380 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549187,nsv549186 M 17421 0 10 USH2A dgv818n54 1 213927960 213928380 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549189,nsv549188 M 17421 0 2 USH2A nsv549190 1 213970460 213995106 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736955 M 17421 0 1 USH2A nsv468116 1 213989483 214014031 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543248 M 1557 0 1 USH2A 1780854261_A nsv549191 1 213989483 214014031 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174044 M 17421 0 1 USH2A 1780854261_A nsv549192 1 214034480 214101376 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736956 M 17421 0 1 USH2A dgv279e59 1 214045752 214046250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3419231,esv3398842 M 185 1 0 USH2A NA19239 esv3302618 1 214045797 214046207 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731334 M 185 1 0 USH2A NA19239 nsv1012279 1 214048681 214102181 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492880 M 29084 0 1 USH2A nsv832548 1 214053712 214242347 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441658 M 95 1 0 USH2A nsv474190 1 214081807 214081807 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019017 M 9 1 0 USH2A NA18507 esv2762219 1 214094007 214096528 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006980 M 1109 0 1 USH2A RW_0020 nsv468127 1 214120709 214133060 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543259 M 1557 0 1 USH2A 1798860114_A nsv549193 1 214120709 214133060 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174045,nssv736957 M 17421 0 2 USH2A 1798860114_A nsv549194 1 214122476 214139221 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736958 M 17421 0 1 USH2A nsv520724 1 214144387 214146778 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689743,nssv674800 M 2026 0 2 USH2A esv1749994 1 214152439 214152501 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4299364 M 2 0 1 USH2A HuRef nsv527176 1 214178831 214182331 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703572 M 2026 0 1 USH2A esv2652396 1 214230666 214232142 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5339777 M 1 0 1 USH2A NA18507 esv1292949 1 214251939 214252111 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4232581 M 2 0 1 USH2A HuRef nsv549195 1 214264638 214282141 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736959 M 17421 0 1 USH2A esv3329628 1 214265337 214265356 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678369 M 185 1 0 USH2A NA19240 esv3325216 1 214265338 214265374 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902957,essv8902956,essv8902959,essv8902955,essv8902954 M 185 5 0 USH2A NA18498,NA18511,NA18909,NA19138,NA19147 esv3422062 1 214265351 214265365 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673901,essv8673902,essv8673903 M 185 3 0 USH2A NA19238,NA19239,NA19240 nsv549196 1 214276295 214284408 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736960 M 17421 0 1 USH2A dgv819n54 1 214281084 214291871 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549197,nsv549198 M 17421 0 2 USH2A nsv1007720 1 214335419 214372750 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493728 M 29084 0 1 USH2A nsv999211 1 214335419 214395959 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499975 M 29084 0 1 USH2A nsv1006028 1 214335419 214499168 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502014 M 29084 0 1 USH2A esv6553 1 214340940 214341134 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28994 M 1 0 0 USH2A nsv476146 1 214350765 214350765 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016004 M 9 1 0 USH2A NA12878 esv2496367 1 214360677 214362027 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5191876 M 1 0 1 USH2A NA18507 nsv473278 1 214368060 214368060 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018503 M 9 1 0 USH2A NA19129 nsv549199 1 214451531 214881325 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174046 M 17421 1 0 ESRRG,USH2A HGDP00823 esv1560943 1 214471202 214471202 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3978915 M 2 1 0 USH2A HuRef nsv4554 1 214479836 214512950 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8090 M 9 1 0 USH2A NA12156 esv3309838 1 214505139 214505140 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7842594,essv7841851 M 185 2 0 USH2A NA19238,NA19240 nsv998835 1 214506295 214548858 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499484 M 29084 0 1 USH2A nsv527827 1 214536730 214542165 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704323 M 2026 0 1 USH2A nsv523863 1 214584258 214696039 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699700 M 2026 0 1 USH2A esv2764185 1 214592516 214604071 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006982,essv7006981 M 1109 0 2 USH2A RW_0088,RW_0508 dgv820n54 1 214696039 214717156 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549201,nsv549200,nsv549202 M 17421 0 3 "" dgv576n100 1 214701837 214721874 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999214,nsv1004287 M 29084 0 4 "" nsv508060 1 214706506 214712506 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621487,nssv622304,nssv624230 M 4 0 0 "" NA10860,NA15510,NA18994 nsv1011849 1 214735004 214767786 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495437 M 29084 1 0 ESRRG nsv1008939 1 214754907 214779193 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489745,nssv3498340 M 29084 2 0 ESRRG nsv4565 1 214786693 214831676 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4969 M 9 0 1 ESRRG NA19129 nsv520098 1 214802761 214812222 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697222 M 2026 0 1 ESRRG nsv468138 1 214802761 214828781 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543270 M 1557 0 1 ESRRG HGDP00963 nsv549203 1 214802761 214828781 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174047 M 17421 0 1 ESRRG HGDP00963 nsv508694 1 214967637 214990506 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620150 M 4 0 1 ESRRG NA15510 esv2762162 1 215009404 215032763 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005645 M 1109 0 1 ESRRG SW_1332 nsv512757 1 215018687 215019493 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625386 M 1 1 0 ESRRG 1 esv1607878 1 215019455 215019455 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3768651 M 2 1 0 ESRRG HuRef esv2762163 1 215048763 215082248 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005656 M 1109 0 1 ESRRG SW_1180 nsv519715 1 215064778 215065087 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv691301,nssv687144,nssv657827,nssv677804,nssv681208,nssv693422,nssv662419,nssv662240,nssv681070,nssv673273,nssv680732,nssv673840,nssv684665,nssv681456 M 2026 0 14 ESRRG nsv472202 1 215078066 215078066 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016586 M 9 1 0 ESRRG NA18555 esv3378536 1 215091480 215091499 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598102 M 185 1 0 ESRRG NA12814 nsv474225 1 215107699 215107699 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013598 M 9 1 0 ESRRG NA18507 nsv520457 1 215168684 215169095 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv671621,nssv691640 M 2026 0 2 ESRRG nsv549204 1 215201589 215269714 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736966 M 17421 1 0 ESRRG dgv577n100 1 215221737 215282088 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011212,nsv1012243,nsv1008670,nsv1004880,nsv1006155 M 29084 10 0 ESRRG nsv471899 1 215225440 215225440 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012487 M 9 1 0 ESRRG NA18555 nsv549205 1 215232171 215336842 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736967 M 17421 0 1 ESRRG esv3364640 1 215236307 215236307 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653207,essv8653209,essv8653206 M 185 3 0 ESRRG NA12878,NA12891,NA12892 nsv521019 1 215294739 215296297 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682412,nssv679966 M 2026 0 2 ESRRG nsv160531 1 215336582 215336646 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179109 M 24 ESRRG nsv525040 1 215350496 215351932 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701084 M 2026 0 1 ESRRG nsv441737 1 215356748 215360951 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656887,nssv1656885,nssv1656884,nssv1656886 M 270 0 4 ESRRG NA06991,NA06993,NA07019,NA07056 nsv514044 1 215356784 215360160 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857854,nssv2857855,nssv2857856,nssv2857853 M 2366 0 4 ESRRG NA06991,NA06993,NA07019,NA07056 dgv59n27 1 215385218 215391277 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv468172,nsv468160 M 1557 0 2 "" HGDP01013,HGDP01015 nsv549206 1 215385218 215391277 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174048 M 17421 0 1 "" HGDP01015 nsv549207 1 215399895 215522526 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736968 M 17421 1 0 "" nsv4576 1 215402181 215433324 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10481 M 9 1 0 "" NA18956 nsv1003559 1 215420718 215485355 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486332 M 29084 1 0 "" esv9487 1 215420778 215420969 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31928 M 1 0 0 "" esv2762164 1 215456574 215809373 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005667 M 1109 1 0 GPATCH2 SW_1373 nsv473263 1 215463456 215463456 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012393 M 9 1 0 "" NA19129 esv2506381 1 215538198 215539047 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5171119 M 1 1 0 "" NA18507 nsv1008328 1 215540365 215842304 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495858 M 29084 1 0 GPATCH2 esv21944 1 215544081 215545855 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12566 M 40 0 1 "" NA19190 nsv832559 1 215545424 215722268 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441659,nssv1441660 M 95 0 2 GPATCH2 esv275295 1 215556383 215559733 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2586140,essv2586141 M 1250 1 1 "" esv1001739 1 215563735 215563790 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574366 M 3 0 1 "" HuRef esv1753802 1 215563762 215563818 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4220711 M 2 0 1 "" HuRef nsv999502 1 215593647 215651392 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500304 M 29084 0 1 "" dgv821n54 1 215602483 215609811 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549209,nsv549208 M 17421 0 2 "" esv22977 1 215609266 215609928 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11365 M 40 0 2 "" NA11993,NA19114 nsv549210 1 215609287 215609709 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736973,nssv736972,nssv736971 M 17421 0 3 "" dgv822n54 1 215609287 215609862 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549212,nsv549211,nsv549214,nsv549213,nsv549215 M 17421 0 16 "" esv3379508 1 215615599 215615618 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598114,essv9598125 M 185 2 0 "" NA11881,NA12234 nsv832570 1 215642604 215816541 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441661 M 95 1 0 GPATCH2 esv2247209 1 215644074 215644510 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4630670 M 1 0 1 "" NA18507 nsv528685 1 215659568 215659893 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705328 M 2026 1 0 "" nsv826631 1 215669957 215670469 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434221 M 31 1 0 GPATCH2 NA18570 nsv832581 1 215701252 215854656 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441671,nssv1441662,nssv1441668,nssv1441667,nssv1441669,nssv1441670,nssv1441665,nssv1441672,nssv1441664,nssv1441666 M 95 9 1 GPATCH2 nsv1003999 1 215729254 215880383 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486047 M 29084 0 1 GPATCH2,SPATA17 esv2572444 1 215820044 215821553 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5351585 M 1 0 1 GPATCH2 NA18507 esv8618 1 215820484 215821281 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31059 M 1 0 0 GPATCH2 esv2015860 1 215820494 215821203 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4894103 M 1 0 1 GPATCH2 NA18507 esv3768 1 215820651 215821055 CNV loss Wang_et_al_2008 18987735 Sequencing essv26209 M 1 0 1 GPATCH2 YH nsv159790 1 215820698 215821000 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178368 M 24 GPATCH2 esv1658318 1 215820713 215821016 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3632945 M 2 0 1 GPATCH2 HuRef esv2762166 1 215828491 215967278 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005678 M 1109 0 1 GPATCH2,SPATA17 SW_1423 nsv468183 1 215955595 215959513 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543314 M 1557 0 1 SPATA17 1780854017_A nsv549216 1 215955595 215959513 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174049 M 17421 0 1 SPATA17 1780854017_A esv3308331 1 215980057 215980058 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839039 M 185 1 0 SPATA17 NA19238 esv3396866 1 215980090 215980139 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673910,essv8673908 M 185 2 0 SPATA17 NA12878,NA12891 esv3352301 1 215980114 215980133 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598136,essv9598147 M 185 2 0 SPATA17 NA11918,NA18970 esv3304574 1 215980123 215980124 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7795607,essv7774638,essv7777120,essv7826622,essv7776016,essv7796099,essv7788763,essv7822446,essv7799405,essv7793565,essv7797537,essv7824298,essv7810745,essv7790049,essv7785736,essv7780114,essv7788344,essv7792675,essv7783358,essv7807375,essv7796441,essv7816665,essv7781922,essv7794774,essv7836167,essv7834498,essv7814666,essv7822727,essv7776949 M 185 29 0 SPATA17 NA06986,NA07357,NA11918,NA11919,NA11992,NA12003,NA12878,NA12891,NA18537,NA18542,NA18550,NA18552,NA18562,NA18563,NA18572,NA18577,NA18592,NA18593,NA18608,NA18638,NA18940,NA18944,NA18945,NA18948,NA18949,NA18961,NA18965,NA18970,NA18980 esv3322896 1 215980124 215980136 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8902999,essv8902995,essv8902993,essv8902986,essv8902987,essv8903007,essv8902989,essv8902983,essv8902984,essv8903009,essv8903005,essv8903008,essv8902985,essv8902988,essv8902997,essv8902981,essv8903000,essv8902992,essv8902996,essv8902994,essv8902998,essv8902990,essv8903001,essv8903004,essv8902982,essv8903006 M 185 26 0 SPATA17 NA06986,NA07357,NA11918,NA11919,NA11992,NA12003,NA18537,NA18542,NA18550,NA18552,NA18562,NA18563,NA18572,NA18577,NA18592,NA18593,NA18608,NA18638,NA18940,NA18944,NA18945,NA18948,NA18949,NA18961,NA18965,NA18980 nsv477696 1 215980788 215980788 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018518 M 9 1 0 SPATA17 NA18517 esv8865 1 215983875 215984681 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31306 M 1 0 0 SPATA17 esv989721 1 215984137 215984449 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572738 M 3 0 1 SPATA17 HuRef esv1474893 1 215984145 215984458 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3674394 M 2 0 1 SPATA17 HuRef nsv549217 1 215990719 216059367 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736990 M 17421 0 1 SPATA17 nsv472635 1 216012746 216012746 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014038 M 9 1 0 SPATA17 NA18555 esv1000763 1 216040315 216043530 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563672 M 3 1 0 SPATA17 HuRef nsv1005829 1 216055212 216542962 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501785 M 29084 1 0 LINC00210,RRP15,SPATA17 esv3402578 1 216068431 216068479 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673911 M 185 1 0 SPATA17 NA12891 esv3305168 1 216068445 216068446 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7782516,essv7834602,essv7806213,essv7819108,essv7779816,essv7833461,essv7808637,essv7788697,essv7793002,essv7785184,essv7793487,essv7802715,essv7770344,essv7813054,essv7813820,essv7797347,essv7806846,essv7773903,essv7821223,essv7771792,essv7798631,essv7784000,essv7820515,essv7808653,essv7772568,essv7803183,essv7809388,essv7774093,essv7787406,essv7790698 M 185 30 0 SPATA17 NA06986,NA07000,NA07037,NA07051,NA07346,NA10847,NA10851,NA11830,NA11894,NA11931,NA11992,NA12004,NA12006,NA12045,NA12144,NA12249,NA12287,NA12489,NA12750,NA12751,NA12763,NA12873,NA12891,NA18489,NA18504,NA18526,NA18552,NA18558,NA18566,NA18970 esv1410169 1 216068466 216068466 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3850118 M 2 1 0 SPATA17 HuRef nsv945292 1 216089373 216091256 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1816933,nssv1816913,nssv1816971,nssv1816912,nssv1816941,nssv1816989,nssv1816967,nssv1816984,nssv1816944,nssv1816980,nssv1816939,nssv1816904,nssv1816950,nssv1816988,nssv1816938,nssv1816915,nssv1816929,nssv1816922,nssv1816976,nssv1816924,nssv1816963,nssv1816987,nssv1816960,nssv1816911,nssv1816947,nssv1816905,nssv1816991,nssv1816981,nssv1816937,nssv1816985,nssv1816943,nssv1816916,nssv1816957,nssv1816907,nssv1816972,nssv1816982,nssv1816997,nssv1816908,nssv1816970,nssv1816921,nssv1816964,nssv1816920,nssv1816959,nssv1816986,nssv1816940,nssv1816927,nssv1816946,nssv1816914,nssv1816965,nssv1816925,nssv1816954,nssv1816934,nssv1816977,nssv1816906,nssv1816996,nssv1816909,nssv1816930,nssv1816917,nssv1816974,nssv1816931,nssv1816942,nssv1816923,nssv1816951,nssv1816918,nssv1816961,nssv1816910,nssv1816948,nssv1816983,nssv1816962,nssv1816932,nssv1816975,nssv1816919,nssv1816973,nssv1816953,nssv1816936,nssv1816968,nssv1816935,nssv1816945,nssv1816993,nssv1816969,nssv1816978,nssv1816995,nssv1816966,nssv1816990,nssv1816956,nssv1816994,nssv1816955,nssv1816928,nssv1816926,nssv1816979,nssv1816952,nssv1816949,nssv1816903,nssv1816999,nssv1816992,nssv1816998,nssv1816958 M 97 10 0 SPATA17 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv477649 1 216091118 216091118 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012828 M 9 1 0 SPATA17 NA18517 nsv523504 1 216093200 216103440 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699275 M 2026 0 1 SPATA17 nsv506981 1 216232470 216238470 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619262,nssv617551,nssv623293,nssv620679 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 nsv4587 1 216234605 216282164 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1705,nssv3771,nssv6154,nssv9907,nssv11183 M 9 0 5 "" NA12156,NA12878,NA15510,NA18507,NA18555 esv2763636 1 216246214 216248880 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005700,essv7005689 M 1109 0 2 "" SW_0072,SW_1162 nsv508695 1 216247326 216264374 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617411,nssv618999,nssv622787,nssv620151 M 4 0 4 "" CHM,NA10860,NA15510,NA18994 nsv135 1 216247751 216282164 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv135 M 1 0 1 "" NA15510 esv2451951 1 216248152 216255682 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5348682 M 1 0 1 "" NA18507 nsv511731 1 216248295 216255960 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626375 M 1 0 1 "" 1 nsv435729 1 216248326 216257063 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465878 M 2 0 1 "" NA15510 esv8443 1 216248854 216255482 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30884 M 1 0 0 "" esv2007662 1 216248911 216255430 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4521431 M 1 0 1 "" NA18507 esv994047 1 216249004 216255496 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564206 M 3 0 1 "" HuRef esv2847 1 216249101 216255288 CNV loss Wang_et_al_2008 18987735 Sequencing essv25288 M 1 0 1 "" YH nsv498710 1 216249111 216255232 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585425 M 9 0 1 "" esv2762167 1 216260138 216267719 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005711 M 1109 0 1 "" SW_0815 esv33696 1 216263960 216270552 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv100641 M 51 1 0 "" 21656 nsv8802 1 216268504 216273470 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23984 M 31 0 1 "" NA11830 nsv832592 1 216275677 216455326 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441673 M 95 1 0 "" nsv511732 1 216311803 216313150 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626376 M 1 0 1 "" 1 esv991053 1 216311910 216319383 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565633 M 3 0 1 "" HuRef esv9459 1 216312055 216313369 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31900 M 1 0 0 "" esv1206785 1 216312261 216313122 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4150269 M 2 0 1 "" HuRef nsv515726 1 216320435 216464203 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv658847,nssv664587 M 2026 0 2 "" nsv476471 1 216335622 216335622 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013542 M 9 1 0 "" NA12878 nsv549218 1 216413409 216453859 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736991 M 17421 0 1 "" esv3306586 1 216440131 216440132 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7758908,essv7743817 M 185 2 0 "" NA18511,NA19129 esv3437490 1 216440132 216440172 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903039,essv8903038 M 185 2 0 "" NA18511,NA19129 esv35038 1 216484143 216490228 CNV loss Pinto_et_al_2007 17911159 SNP array essv6980644,essv6987828 M 771 0 2 "" NA19240 esv25651 1 216484530 216488237 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12815 M 40 0 2 "" NA19108,NA19240 nsv441738 1 216484875 216489763 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656888,nssv1656889 M 270 0 2 "" NA19238,NA19239 nsv514045 1 216485152 216488192 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857864,nssv2857868,nssv2857859,nssv2857862,nssv2857869,nssv2857863,nssv2857860,nssv2857865,nssv2857861,nssv2857866,nssv2857857,nssv2857867,nssv2857858 M 2366 0 13 "" NA18924,NA18925,NA19096,NA19101,NA19108,NA19153,NA19221,NA19223,NA19239,NA19240,NA19248,NA21404,NA21717 esv3450036 1 216517387 216517406 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598180 M 185 1 0 "" NA12874 nsv4598 1 216547772 216583054 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8107 M 9 0 1 RRP15 NA12156 nsv945293 1 216578419 216578919 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818004,nssv1818019,nssv1818002,nssv1818015,nssv1817005,nssv1817996,nssv1817007,nssv1817980,nssv1817012,nssv1817977,nssv1817006,nssv1817958,nssv1818003,nssv1817000,nssv1817013,nssv1817999,nssv1817009,nssv1817962,nssv1818005,nssv1818013,nssv1817001,nssv1817950,nssv1817021,nssv1817986,nssv1817019,nssv1817972,nssv1817010,nssv1818020,nssv1817008,nssv1817957,nssv1818009,nssv1817954,nssv1817953,nssv1817992,nssv1817004,nssv1817985,nssv1817002,nssv1817984,nssv1817018,nssv1817993,nssv1818006,nssv1817976,nssv1817017,nssv1817971,nssv1817015,nssv1817981,nssv1817014,nssv1818012,nssv1817022,nssv1817978,nssv1818001,nssv1817988,nssv1818008,nssv1817991,nssv1817955,nssv1817975,nssv1817948,nssv1817982,nssv1817952,nssv1817989,nssv1818010,nssv1817966,nssv1817016,nssv1817970,nssv1817020,nssv1817968,nssv1817003,nssv1817951,nssv1818007,nssv1817967,nssv1817011,nssv1817998,nssv1818018,nssv1817997,nssv1817995,nssv1817987,nssv1817965,nssv1818000,nssv1818017,nssv1817994,nssv1817960,nssv1817983,nssv1817990,nssv1817956,nssv1817973,nssv1818011,nssv1817979,nssv1817969,nssv1817963,nssv1817974,nssv1818014,nssv1817959,nssv1817964,nssv1818016,nssv1817961,nssv1817949,nssv1817023 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832603 1 216603976 216765332 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441675 M 95 1 0 TGFB2 nsv4609 1 216719533 216752879 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4970 M 9 1 0 "" NA19129 nsv826642 1 216736958 216737480 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1425553 M 31 1 0 "" AK4 nsv477257 1 216744313 216744313 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013938 M 9 1 0 "" NA18517 nsv528696 1 216755778 216772384 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705341 M 2026 0 1 "" nsv1010342 1 216763546 216815854 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493188 M 29084 1 0 "" esv3361007 1 216822554 216822564 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673913,essv8673912 M 185 2 0 "" NA12878,NA12892 esv3308605 1 216822556 216822557 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838248,essv7838137 M 185 2 0 "" NA12878,NA12891 esv1089132 1 216838804 216838987 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4106166 M 2 0 1 "" HuRef esv8778 1 216852309 216853107 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31219 M 1 0 0 "" esv4179 1 216852508 216852951 CNV loss Wang_et_al_2008 18987735 Sequencing essv26620 M 1 0 1 "" YH nsv1002772 1 216923367 217065495 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484822 M 29084 0 1 "" nsv549219 1 216924320 217064055 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736992 M 17421 0 1 "" esv24370 1 216984203 216989392 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19851 M 40 0 1 "" NA19108 esv3385952 1 217007331 217007331 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701364 M 185 1 0 "" NA12878 nsv1014510 1 217042384 217258581 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497742 M 29084 0 1 "" esv2762220 1 217065507 217075521 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006983 M 1109 0 1 "" RW_0186 nsv1000897 1 217110357 217173829 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705517 M 29084 0 1 "" nsv832614 1 217126843 217303243 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441676 M 95 1 0 "" nsv525059 1 217154788 217162005 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701109 M 2026 0 1 "" nsv549220 1 217203759 217234461 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736993 M 17421 0 1 "" nsv549221 1 217210221 217249247 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736994 M 17421 0 1 "" nsv512758 1 217228006 217228467 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625387 M 1 1 0 "" 1 esv3367405 1 217228118 217228708 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808948 M 185 1 0 "" NA12878 esv1220167 1 217228234 217228234 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4319881 M 2 1 0 "" HuRef nsv826653 1 217236333 217238523 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423875 M 31 0 1 "" NA18968 esv3363087 1 217240882 217240901 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598191 M 185 1 0 "" NA11840 esv8114 1 217250683 217250898 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30555 M 1 0 0 "" esv3450121 1 217250799 217250799 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825103 M 185 1 0 "" NA19240 esv3449706 1 217250800 217250800 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825104 M 185 1 0 "" NA19240 esv2605796 1 217258183 217259597 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5267207 M 1 0 1 "" NA18507 nsv1010912 1 217295439 217413227 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493378 M 29084 0 1 LOC643723 dgv25n21 1 217417479 217434585 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv520564,nsv527700 M 2026 0 2 LYPLAL1 nsv4620 1 217439664 217484422 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8111 M 9 0 1 LYPLAL1 NA12156 esv2762222 1 217469050 217491333 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006984 M 1109 0 1 "" RW_0210 esv2187882 1 217499167 217499574 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4663197 M 1 0 1 "" NA18507 esv3335506 1 217567076 217567091 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863819 M 185 1 0 "" NA12005 esv3307733 1 217625487 217625488 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7751923,essv7757149,essv7761851,essv7753856,essv7762766 M 185 5 0 "" NA10847,NA11995,NA12003,NA12155,NA12716 esv3378337 1 217625499 217625538 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903040,essv8903042,essv8903043,essv8903044,essv8903041 M 185 5 0 "" NA10847,NA11995,NA12003,NA12155,NA12716 esv3334495 1 217641291 217641310 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598213,essv9598202 M 185 2 0 "" NA11931,NA12872 esv3304850 1 217641300 217641301 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7765247,essv7766274,essv7767241,essv7766217,essv7768399 M 185 5 0 "" NA11931,NA12872,NA12873,NA12891,NA19238 esv3332954 1 217641300 217641315 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673914,essv8673915 M 185 2 0 "" NA12891,NA19238 esv3308509 1 217641306 217641307 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838439 M 185 1 0 "" NA12891 nsv832625 1 217703664 217892621 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441677 M 95 0 1 "" nsv472352 1 217815442 217815442 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019087 M 9 1 0 "" NA18555 nsv945294 1 217828660 217852949 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818094,nssv1818075,nssv1818028,nssv1818056,nssv1818041,nssv1818021,nssv1818024,nssv1818083,nssv1818050,nssv1818089,nssv1818026,nssv1818059,nssv1818100,nssv1818054,nssv1818095,nssv1818055,nssv1818023,nssv1818074,nssv1818037,nssv1818051,nssv1818040,nssv1818082,nssv1818031,nssv1818047,nssv1818092,nssv1818090,nssv1818091,nssv1818081,nssv1818042,nssv1818068,nssv1818030,nssv1818078,nssv1818093,nssv1818073,nssv1818029,nssv1818085,nssv1818032,nssv1818069,nssv1818099,nssv1818048,nssv1818022,nssv1818077,nssv1818096,nssv1818060,nssv1818039,nssv1818072,nssv1818038,nssv1818088,nssv1818036,nssv1818080,nssv1818033,nssv1818065,nssv1818025,nssv1818063,nssv1818027,nssv1818067,nssv1818034,nssv1818079,nssv1818043,nssv1818086,nssv1818045,nssv1818066,nssv1818052,nssv1818046,nssv1818049,nssv1818064,nssv1818035,nssv1818076,nssv1818098,nssv1818084,nssv1818097,nssv1818062,nssv1818061,nssv1818057,nssv1818044,nssv1818058,nssv1818053,nssv1818087,nssv1818071,nssv1818070 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv8449 1 217989689 217990493 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30890 M 1 0 0 "" esv2142917 1 217989751 217990457 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4714937 M 1 0 1 "" NA18507 esv3789 1 217989899 217990338 CNV loss Wang_et_al_2008 18987735 Sequencing essv26230 M 1 0 1 "" YH nsv160852 1 217989932 217990249 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179430 M 24 "" nsv479199 1 218101739 218101739 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016132 M 9 0 0 "" nsv479134 1 218109059 218109059 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015048 M 9 0 0 "" nsv480665 1 218110113 218110113 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011692 M 9 0 0 "" nsv160622 1 218140980 218140980 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179200 M 24 RNU5F-1 esv3310435 1 218143588 218144778 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843545 M 185 1 0 RNU5F-1 NA19240 esv3441707 1 218143658 218144776 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652063 M 185 1 0 RNU5F-1 NA19240 esv1008351 1 218144180 218144191 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564532 M 3 1 0 RNU5F-1 HuRef esv1506490 1 218144279 218144279 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4058295 M 2 1 0 RNU5F-1 HuRef esv2281071 1 218181236 218181737 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4614613 M 1 0 1 RNU5F-1 NA18507 esv4170 1 218181418 218181638 CNV loss Wang_et_al_2008 18987735 Sequencing essv26611 M 1 0 1 RNU5F-1 YH esv1609241 1 218181517 218181589 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3977761 M 2 0 1 RNU5F-1 HuRef nsv478980 1 218186499 218186499 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012663 M 9 0 0 RNU5F-1 nsv998124 1 218199362 218255834 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498678 M 29084 1 0 EPRS,RNU5F-1 esv1356387 1 218200404 218200404 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3996520 M 2 1 0 RNU5F-1 HuRef nsv832636 1 218206320 218360975 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441678 M 95 0 1 BPNT1,EPRS,IARS2,MIR194-1,MIR215,RNU5F-1 nsv819514 1 218208628 218208751 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418547 M 2 0 1 EPRS,RNU5F-1 AK1 esv9238 1 218252646 218252849 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31679 M 1 0 0 EPRS,RNU5F-1 esv1351321 1 218252788 218252788 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3629226 M 2 1 0 EPRS,RNU5F-1 HuRef esv5550 1 218265169 218265343 CNV gain Ahn_et_al_2009 19470904 Sequencing essv27991 M 1 0 0 EPRS,RNU5F-1 nsv4632 1 218281492 218316817 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv545 M 9 1 0 BPNT1,EPRS,RNU5F-1 NA19240 nsv826664 1 218288197 218291031 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431125,nssv1433468 M 31 0 2 RNU5F-1 AK18,NA18526 esv2360153 1 218292457 218292903 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4931780 M 1 0 1 RNU5F-1 NA18507 esv3201 1 218292572 218292793 CNV loss Wang_et_al_2008 18987735 Sequencing essv25642 M 1 0 1 RNU5F-1 YH esv1103180 1 218292649 218292731 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3694799 M 2 0 1 RNU5F-1 HuRef nsv549222 1 218293355 218313015 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736995 M 17421 0 1 BPNT1,RNU5F-1 nsv945295 1 218349026 218350881 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818121,nssv1818101,nssv1818102,nssv1818136,nssv1817354,nssv1818140,nssv1818110,nssv1818141,nssv1817362,nssv1818126,nssv1817357,nssv1818156,nssv1818106,nssv1818151,nssv1818103,nssv1818138,nssv1818104,nssv1817334,nssv1818120,nssv1817341,nssv1818117,nssv1817338,nssv1817360,nssv1817366,nssv1818114,nssv1818146,nssv1817353,nssv1817348,nssv1818122,nssv1817367,nssv1818109,nssv1818135,nssv1818119,nssv1817372,nssv1818111,nssv1818154,nssv1818118,nssv1817365,nssv1818107,nssv1818134,nssv1817358,nssv1818131,nssv1818112,nssv1818139,nssv1818105,nssv1817351,nssv1818108,nssv1817342,nssv1817359,nssv1818127,nssv1818123,nssv1817371,nssv1818116,nssv1817339,nssv1817355,nssv1817346,nssv1818129,nssv1817364,nssv1817361,nssv1817345,nssv1817356,nssv1818148,nssv1818113,nssv1817333,nssv1818125,nssv1818149,nssv1818132,nssv1817344,nssv1818115,nssv1818152,nssv1818130,nssv1818153,nssv1818150,nssv1818128,nssv1818145,nssv1818155,nssv1817370,nssv1817340,nssv1817336,nssv1817352,nssv1817369,nssv1817349,nssv1818143,nssv1817335,nssv1817350,nssv1818147,nssv1817347,nssv1817343,nssv1817368,nssv1818133,nssv1818137,nssv1817332,nssv1818144,nssv1817363,nssv1818124,nssv1817337,nssv1818142 M 97 10 0 IARS2,RNU5F-1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2107700 1 218351874 218352535 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4755934 M 1 0 1 IARS2,RNU5F-1 NA18507 nsv947468 1 218354599 218359372 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765368 M 97 0 1 IARS2,MIR194-1,MIR215,RNU5F-1 HGDP00521 nsv945296 1 218383829 218384329 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1817450,nssv1817410,nssv1817393,nssv1817449,nssv1817378,nssv1817407,nssv1817459,nssv1817413,nssv1817376,nssv1817399,nssv1817454,nssv1817412,nssv1817452,nssv1817465,nssv1817384,nssv1817418,nssv1817389,nssv1817415,nssv1817392,nssv1817460,nssv1817382,nssv1817431,nssv1817388,nssv1817445,nssv1817451,nssv1817464,nssv1817457,nssv1817463,nssv1817394,nssv1817428,nssv1817381,nssv1817438,nssv1817385,nssv1817398,nssv1817383,nssv1817423,nssv1817377,nssv1817469,nssv1817391,nssv1817396,nssv1817386,nssv1817422,nssv1817390,nssv1817468,nssv1817380,nssv1817406,nssv1817374,nssv1817436,nssv1817375,nssv1817426,nssv1817402,nssv1817462,nssv1817395,nssv1817403,nssv1817456,nssv1817373,nssv1817387,nssv1817448,nssv1817453,nssv1817439,nssv1817397,nssv1817414,nssv1817404,nssv1817427,nssv1817401,nssv1817443,nssv1817379,nssv1817435,nssv1817458,nssv1817441,nssv1817455,nssv1817442,nssv1817421,nssv1817425,nssv1817408,nssv1817411,nssv1817461,nssv1817419,nssv1817420,nssv1817417,nssv1817430,nssv1817409,nssv1817467,nssv1817446,nssv1817416,nssv1817424,nssv1817429,nssv1817405,nssv1817466,nssv1817437,nssv1817433,nssv1817400,nssv1817432,nssv1817434,nssv1817447,nssv1817440,nssv1817444 M 97 10 0 IARS2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv6960 1 218457480 218457672 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29401 M 1 0 0 RAB3GAP2 nsv4643 1 218464265 218508854 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1706 M 9 0 1 AURKAPS1,RAB3GAP2 NA18555 nsv945297 1 218493437 218501302 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1817555,nssv1817546,nssv1817501,nssv1817507,nssv1817473,nssv1817561,nssv1817556,nssv1817511,nssv1817475,nssv1817500,nssv1817489,nssv1817531,nssv1817480,nssv1817563,nssv1817486,nssv1817544,nssv1817485,nssv1817513,nssv1817550,nssv1817522,nssv1817490,nssv1817510,nssv1817549,nssv1817505,nssv1817481,nssv1817541,nssv1817491,nssv1817543,nssv1817554,nssv1817504,nssv1817552,nssv1817502,nssv1817551,nssv1817509,nssv1817478,nssv1817515,nssv1817548,nssv1817519,nssv1817553,nssv1817542,nssv1817488,nssv1817562,nssv1817474,nssv1817535,nssv1817487,nssv1817560,nssv1817472,nssv1817528,nssv1817483,nssv1817525,nssv1817492,nssv1817470,nssv1817499,nssv1817557,nssv1817484,nssv1817495,nssv1817498,nssv1817493,nssv1817471,nssv1817520,nssv1817494,nssv1817533,nssv1817477,nssv1817503,nssv1817476,nssv1817523,nssv1817479,nssv1817536,nssv1817547,nssv1817532,nssv1817482,nssv1817566,nssv1817526,nssv1817496,nssv1817521,nssv1817565,nssv1817497,nssv1817506,nssv1817540,nssv1817545,nssv1817539,nssv1817518,nssv1817538,nssv1817559,nssv1817514,nssv1817516,nssv1817508,nssv1817530,nssv1817527,nssv1817558,nssv1817517,nssv1817564,nssv1817512,nssv1817524,nssv1817529,nssv1817537,nssv1817534 M 97 10 0 RAB3GAP2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv826675 1 218503564 218506287 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1435695 M 31 0 1 AURKAPS1,RAB3GAP2 NA18566 nsv826686 1 218506312 218507633 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1435697 M 31 0 1 AURKAPS1,RAB3GAP2 NA18566 nsv945298 1 218506421 218507737 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818877,nssv1817602,nssv1818879,nssv1817634,nssv1817586,nssv1817627,nssv1817575,nssv1817623,nssv1817572,nssv1817628,nssv1817583,nssv1817609,nssv1817574,nssv1818890,nssv1818880,nssv1817621,nssv1818885,nssv1817610,nssv1817576,nssv1817608,nssv1817578,nssv1817603,nssv1817588,nssv1818888,nssv1818883,nssv1817618,nssv1817598,nssv1818874,nssv1817596,nssv1818894,nssv1817582,nssv1818889,nssv1817587,nssv1817606,nssv1818882,nssv1817638,nssv1817580,nssv1817604,nssv1817568,nssv1817612,nssv1817585,nssv1817594,nssv1818884,nssv1817590,nssv1817571,nssv1817599,nssv1817584,nssv1817607,nssv1817570,nssv1817622,nssv1817577,nssv1817625,nssv1817579,nssv1817617,nssv1817573,nssv1818887,nssv1817589,nssv1817629,nssv1817581,nssv1817601,nssv1818876,nssv1817619,nssv1817595,nssv1817632,nssv1817591,nssv1817616,nssv1817569,nssv1817600,nssv1818878,nssv1817636,nssv1818881,nssv1817615,nssv1817592,nssv1817567,nssv1817630,nssv1817633,nssv1818886,nssv1817635,nssv1818893,nssv1817639,nssv1817597,nssv1818873,nssv1817637,nssv1817613,nssv1817593,nssv1817605,nssv1817624,nssv1817620,nssv1818875,nssv1818891,nssv1818895,nssv1818892,nssv1817611,nssv1817614,nssv1817631,nssv1818872,nssv1817626 M 97 10 0 AURKAPS1,RAB3GAP2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3358012 1 218526471 218526471 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823671 M 185 1 0 "" NA12878 nsv523114 1 218552972 218567581 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698813 M 2026 0 1 "" nsv945299 1 218554445 218558240 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818925,nssv1818988,nssv1818976,nssv1818939,nssv1818902,nssv1818935,nssv1818910,nssv1818934,nssv1818911,nssv1818942,nssv1818978,nssv1818959,nssv1818898,nssv1818956,nssv1818901,nssv1818946,nssv1818977,nssv1818969,nssv1818982,nssv1818954,nssv1818915,nssv1818968,nssv1818912,nssv1818961,nssv1818979,nssv1818987,nssv1818916,nssv1818989,nssv1818908,nssv1818932,nssv1818974,nssv1818964,nssv1818906,nssv1818949,nssv1818904,nssv1818923,nssv1818905,nssv1818943,nssv1818927,nssv1818941,nssv1818917,nssv1818933,nssv1818903,nssv1818971,nssv1818914,nssv1818944,nssv1818975,nssv1818985,nssv1818913,nssv1818940,nssv1818980,nssv1818958,nssv1818907,nssv1818962,nssv1818973,nssv1818965,nssv1818981,nssv1818960,nssv1818900,nssv1818953,nssv1818918,nssv1818936,nssv1818924,nssv1818931,nssv1818920,nssv1818984,nssv1818909,nssv1818952,nssv1818899,nssv1818963,nssv1818897,nssv1818929,nssv1818986,nssv1818930,nssv1818955,nssv1818919,nssv1818950,nssv1818947,nssv1818948,nssv1818991,nssv1818928,nssv1818945,nssv1818983,nssv1818970,nssv1818896,nssv1818990,nssv1818957,nssv1818951,nssv1818937,nssv1818926,nssv1818967,nssv1818972,nssv1818921,nssv1818922,nssv1818992,nssv1818938,nssv1818966 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1006979 1 218554811 218568141 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483292,nssv3491941 M 29084 0 2 "" esv26061 1 218562011 218566191 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16878 M 40 0 2 "" NA18511,NA19257 nsv549223 1 218567581 218570024 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv736996,nssv736997 M 17421 0 2 "" nsv549224 1 218568512 218570024 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737000,nssv736998,nssv737001,nssv736999 M 17421 0 4 "" nsv549225 1 218568512 218571046 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737002 M 17421 0 1 "" dgv100n67 1 218569355 218570359 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826731,nsv826698 M 31 0 9 "" AK16,AK2,AK4,AK8,NA18526,NA18537,NA18542,NA18566,NA18968 dgv101n67 1 218569522 218570112 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826720,nsv826709 M 31 0 2 "" AK10,NA18592 esv29182 1 218569635 218570146 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18796 M 40 0 4 "" NA06985,NA11993,NA12239,NA12489 nsv549226 1 218569660 218570024 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737018,nssv737017,nssv737046,nssv737014,nssv737011,nssv737047,nssv737003,nssv737024,nssv737023,nssv737025,nssv737044,nssv737036,nssv737021,nssv737041,nssv737040,nssv737029,nssv737027,nssv737034,nssv737038,nssv737031,nssv737037,nssv737022,nssv737026,nssv737043,nssv737032,nssv737013,nssv737016,nssv737028,nssv737054,nssv737035,nssv737045,nssv737019,nssv737033,nssv737030,nssv737042,nssv737048,nssv737020,nssv737015,nssv737039,nssv737050,nssv737053,nssv737052,nssv737009,nssv737051,nssv737010,nssv737049,nssv737006,nssv737008,nssv737012,nssv737004,nssv737007,nssv737005 M 17421 0 52 "" esv1113399 1 218632422 218632422 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4102975 M 2 1 0 "" HuRef esv1009136 1 218674186 218680069 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564897 M 3 0 1 "" HuRef nsv945300 1 218688085 218689324 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819077,nssv1819064,nssv1819008,nssv1819032,nssv1819073,nssv1819035,nssv1819078,nssv1819063,nssv1818998,nssv1819031,nssv1818996,nssv1818993,nssv1819075,nssv1819019,nssv1818995,nssv1818471,nssv1819007,nssv1819066,nssv1819003,nssv1819042,nssv1819074,nssv1819051,nssv1819079,nssv1819039,nssv1819022,nssv1819053,nssv1819013,nssv1819058,nssv1819012,nssv1819043,nssv1819009,nssv1819029,nssv1819002,nssv1819065,nssv1819071,nssv1819061,nssv1819000,nssv1819068,nssv1819001,nssv1819036,nssv1818999,nssv1819056,nssv1819005,nssv1819038,nssv1819076,nssv1819046,nssv1819072,nssv1819030,nssv1819014,nssv1819055,nssv1819011,nssv1819040,nssv1819010,nssv1819057,nssv1819024,nssv1819028,nssv1818997,nssv1819027,nssv1818994,nssv1819062,nssv1819004,nssv1818473,nssv1819015,nssv1818469,nssv1819021,nssv1819037,nssv1819070,nssv1819050,nssv1819017,nssv1819041,nssv1819006,nssv1819020,nssv1819059,nssv1818468,nssv1819060,nssv1819052,nssv1818466,nssv1819026,nssv1819025,nssv1819033,nssv1818472,nssv1819016,nssv1819023,nssv1819047,nssv1819044,nssv1819054,nssv1818467,nssv1819067,nssv1819034,nssv1818465,nssv1819049,nssv1819069,nssv1819080,nssv1819048,nssv1818470,nssv1819018,nssv1819045 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1360356 1 218706536 218706536 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4307662 M 2 1 0 "" HuRef esv1050000 1 218715957 218715957 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3652059 M 2 1 0 "" HuRef nsv473422 1 218744111 218744111 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015523 M 9 1 0 "" NA19129 nsv477261 1 218765340 218765340 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016940 M 9 1 0 "" NA18517 nsv508061 1 218767194 218773194 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621489,nssv622305,nssv624231,nssv618521 M 4 0 0 MARK1 CHM,NA10860,NA15510,NA18994 esv2470287 1 218815469 218816526 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5310984 M 1 1 0 MARK1 NA18507 nsv468194 1 218912233 218952235 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543325 M 1557 0 1 C1orf115 HGDP01214 nsv549227 1 218912233 218952235 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174050 M 17421 0 1 C1orf115 HGDP01214 nsv945302 1 218917972 218921336 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818553,nssv1818520,nssv1818554,nssv1818531,nssv1818494,nssv1818518,nssv1818479,nssv1818521,nssv1818555,nssv1818541,nssv1818560,nssv1818548,nssv1818493,nssv1818525,nssv1818490,nssv1818497,nssv1818475,nssv1818515,nssv1818505,nssv1818550,nssv1818483,nssv1818545,nssv1818552,nssv1818561,nssv1818482,nssv1819492,nssv1818495,nssv1819491,nssv1818556,nssv1818533,nssv1818551,nssv1818530,nssv1818492,nssv1818506,nssv1818486,nssv1818528,nssv1818559,nssv1818474,nssv1818491,nssv1819493,nssv1818477,nssv1818516,nssv1818558,nssv1819488,nssv1818488,nssv1818547,nssv1818478,nssv1819494,nssv1818485,nssv1818523,nssv1818489,nssv1818517,nssv1818480,nssv1818499,nssv1818496,nssv1818511,nssv1818487,nssv1818504,nssv1818476,nssv1818507,nssv1818503,nssv1818510,nssv1818481,nssv1818539,nssv1818484,nssv1818524,nssv1818502,nssv1818535,nssv1818498,nssv1818549,nssv1818557,nssv1818537,nssv1818546,nssv1819489,nssv1819490,nssv1818536,nssv1818529,nssv1818500,nssv1818542,nssv1818526,nssv1818514,nssv1818563,nssv1818527,nssv1818513,nssv1818501,nssv1818509,nssv1818519,nssv1818540,nssv1818534,nssv1818562,nssv1818543,nssv1818522,nssv1818544,nssv1818532,nssv1818508,nssv1818538,nssv1818512 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945303 1 218937112 218937793 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819526,nssv1819535,nssv1819502,nssv1819557,nssv1819496,nssv1819566,nssv1819575,nssv1819540,nssv1819508,nssv1819522,nssv1819577,nssv1819532,nssv1819573,nssv1819570,nssv1819579,nssv1819531,nssv1819500,nssv1819549,nssv1819572,nssv1819539,nssv1819576,nssv1819551,nssv1819507,nssv1819542,nssv1819581,nssv1819534,nssv1819514,nssv1819583,nssv1819511,nssv1819559,nssv1819510,nssv1819582,nssv1819506,nssv1819556,nssv1819580,nssv1819590,nssv1819504,nssv1819561,nssv1819509,nssv1819543,nssv1819513,nssv1819527,nssv1819503,nssv1819569,nssv1819578,nssv1819552,nssv1819574,nssv1819589,nssv1819512,nssv1819562,nssv1819516,nssv1819518,nssv1819498,nssv1819546,nssv1819497,nssv1819588,nssv1819519,nssv1819565,nssv1819501,nssv1819530,nssv1819515,nssv1819528,nssv1819505,nssv1819550,nssv1819499,nssv1819553,nssv1819524,nssv1819585,nssv1819517,nssv1819495,nssv1819523,nssv1819591,nssv1819529,nssv1819521,nssv1819571,nssv1819544,nssv1819563,nssv1819568,nssv1819520,nssv1819538,nssv1819545,nssv1819533,nssv1819525,nssv1819536,nssv1819537,nssv1819586,nssv1819567,nssv1819564,nssv1819541,nssv1819555,nssv1819584,nssv1819587,nssv1819558,nssv1819560,nssv1819548,nssv1819547,nssv1819554 M 97 10 0 C1orf115 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv826742 1 218937427 218938256 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431867 M 31 0 1 C1orf115 AK20 nsv160470 1 218985638 218989402 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179048 M 24 MARC2 nsv523389 1 218993467 219022635 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699139 M 2026 0 1 MARC2 esv1008867 1 219053588 219066326 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565053 M 3 0 1 MARC1 HuRef nsv819685 1 219119246 219120395 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419185 M 2 1 0 HLX AK1 nsv4654 1 219249599 219271037 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3781 M 9 1 0 "" NA12878 nsv159143 1 219281512 219282616 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177721 M 24 "" nsv947469 1 219361496 219374210 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2763656 M 97 1 0 "" HGDP00998 esv2471455 1 219537880 219539153 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5220629 M 1 0 1 "" NA18507 esv274994 1 219579246 219586481 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2586132,essv2585546 M 1250 1 1 "" nsv826753 1 219740751 219741462 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1432565,nssv1424509,nssv1427305,nssv1438040 M 31 0 4 "" AK8,NA18547,NA18947,NA18972 esv2760080 1 219809513 219830010 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006991,essv7006986,essv7006988,essv7006992,essv7006987,essv7006993,essv7006985,essv7006990 M 1109 0 8 "" RW_0047,RW_0105,RW_0117,RW_0266,RW_0271,RW_0567,RW_0603,RW_0607 esv27858 1 219810579 219821045 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11257 M 40 0 1 "" NA18517 nsv947470 1 219810695 219816045 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2757923 M 97 0 1 "" HGDP00927 nsv514046 1 219812672 219815952 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857872,nssv2857873,nssv2857871,nssv2857883,nssv2857870,nssv2857877,nssv2857876,nssv2857879,nssv2857875,nssv2857874,nssv2857880,nssv2857882,nssv2857881,nssv2857878 M 2366 0 14 "" NA18517,NA18874,NA18875,NA19096,NA19119,NA19160,NA19161,NA19201,NA19202,NA19221,NA19222,NA19248,NA19249,NA21600 nsv441739 1 219812673 219820232 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656898,nssv1656896,nssv1656891,nssv1656895,nssv1656890,nssv1656892,nssv1656894,nssv1656897,nssv1656893 M 270 0 9 "" NA18515,NA18517,NA19119,NA19160,NA19161,NA19201,NA19202,NA19221,NA19222 esv2421475 1 219812673 219820268 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5116307,essv5058130,essv5048687,essv5140419,essv5105416,essv5080351,essv5024601,essv5109738,essv5003763,essv5128804,essv5014821,essv5062931,essv5113214,essv5155138,essv5063058,essv5008432,essv5079922,essv5140339,essv5050109,essv5040880,essv5149420,essv5131192,essv5110020,essv5142349,essv5032309,essv5109712 M 1184 0 26 "" NA18515,NA18517,NA18520,NA18874,NA18875,NA19028,NA19096,NA19119,NA19160,NA19161,NA19201,NA19202,NA19221,NA19222,NA19248,NA19249,NA19377,NA19381,NA19382,NA19440,NA19661,NA19908,NA21573,NA21577,NA21600,NA21719 nsv506982 1 219821304 219827304 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619263,nssv623294 M 4 0 0 "" NA10860,NA18994 nsv1011037 1 219823149 219876175 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494268 M 29084 1 0 "" esv2551121 1 219856214 219857530 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5244971 M 1 0 1 "" NA18507 esv25042 1 219870530 219872497 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13406 M 40 0 1 "" NA18505 esv1751713 1 219894444 219894444 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4200792 M 2 1 0 "" HuRef nsv469786 1 219922494 220106958 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1672484 M 265 0 1 DUSP10 esv7152 1 219965483 219965667 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29593 M 1 0 0 DUSP10 esv3443591 1 220035769 220035788 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598269,essv9598236,essv9598258,essv9598225,essv9598247 M 185 5 0 "" NA11881,NA12249,NA12814,NA12815,NA12872 esv3305257 1 220035777 220035778 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7779054,essv7821012,essv7816348,essv7809841,essv7796465,essv7798002,essv7829408,essv7819600,essv7795270,essv7788038,essv7832717,essv7814114,essv7835979,essv7819892,essv7783360,essv7833903,essv7802151,essv7771382,essv7797100,essv7770665,essv7815990,essv7774626,essv7812800,essv7795014,essv7786202,essv7770226,essv7825233,essv7812464,essv7814426,essv7801479,essv7785972,essv7784691,essv7810651,essv7817372,essv7786707,essv7782357,essv7811122,essv7798179,essv7789400,essv7825864,essv7777420,essv7800573,essv7821880,essv7806882,essv7776419,essv7787367,essv7824745,essv7790294,essv7798958,essv7823850,essv7827663,essv7803393,essv7834209,essv7812351,essv7787746,essv7808030,essv7833254,essv7780402,essv7795739,essv7822131,essv7801836,essv7826886,essv7800131,essv7783081,essv7811679,essv7803051,essv7772633,essv7819222 M 185 68 0 "" NA07037,NA07347,NA07357,NA10847,NA11829,NA11830,NA11881,NA11918,NA11919,NA11920,NA11993,NA11994,NA11995,NA12003,NA12144,NA12154,NA12249,NA12414,NA12716,NA12717,NA12814,NA12815,NA12828,NA12872,NA12878,NA12892,NA18486,NA18499,NA18501,NA18502,NA18508,NA18516,NA18523,NA18526,NA18537,NA18558,NA18561,NA18564,NA18566,NA18572,NA18573,NA18576,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18638,NA18856,NA18870,NA18916,NA18940,NA18944,NA18945,NA18952,NA18953,NA18956,NA18959,NA18961,NA18965,NA19102,NA19116,NA19147,NA19190,NA19210 esv3423684 1 220035777 220035790 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903048,essv8903083,essv8903077,essv8903071,essv8903108,essv8903085,essv8903104,essv8903046,essv8903045,essv8903086,essv8903095,essv8903084,essv8903065,essv8903073,essv8903052,essv8903089,essv8903057,essv8903050,essv8903070,essv8903078,essv8903059,essv8903079,essv8903105,essv8903055,essv8903053,essv8903082,essv8903107,essv8903103,essv8903092,essv8903066,essv8903072,essv8903099,essv8903081,essv8903098,essv8903101,essv8903060,essv8903111,essv8903049,essv8903100,essv8903087,essv8903054,essv8903076,essv8903109,essv8903093,essv8903110,essv8903064,essv8903075,essv8903106,essv8903063,essv8903068,essv8903067,essv8903097,essv8903074,essv8903056,essv8903090,essv8903088,essv8903096,essv8903051,essv8903061,essv8903094,essv8903062 M 185 61 0 "" NA07037,NA07357,NA10847,NA11829,NA11830,NA11918,NA11919,NA11920,NA11993,NA11994,NA11995,NA12003,NA12144,NA12154,NA12249,NA12414,NA12716,NA12717,NA12828,NA18486,NA18499,NA18501,NA18502,NA18508,NA18516,NA18523,NA18526,NA18537,NA18558,NA18561,NA18564,NA18566,NA18572,NA18573,NA18576,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18638,NA18856,NA18870,NA18916,NA18940,NA18944,NA18945,NA18952,NA18953,NA18956,NA18959,NA18961,NA18965,NA19102,NA19116,NA19147,NA19190,NA19210 esv3365459 1 220035786 220035798 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673916,essv8673917 M 185 2 0 "" NA12878,NA12892 esv3308937 1 220035789 220035790 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838154,essv7837857 M 185 2 0 "" NA12878,NA12892 esv2520781 1 220100374 220101943 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5374871 M 1 0 1 "" NA18507 esv2194421 1 220100570 220101293 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4502486 M 1 0 1 "" NA18507 esv2858 1 220100699 220101140 CNV loss Wang_et_al_2008 18987735 Sequencing essv25299 M 1 0 1 "" YH esv1254343 1 220100781 220101113 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4129587 M 2 0 1 "" HuRef nsv518321 1 220119857 220122026 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695751 M 2026 1 0 "" nsv4665 1 220153298 220187084 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8123 M 9 1 0 "" NA12156 nsv945304 1 220180970 220197878 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819623,nssv1819652,nssv1819616,nssv1819633,nssv1819612,nssv1819635,nssv1819669,nssv1819684,nssv1819672,nssv1819667,nssv1819621,nssv1819681,nssv1819675,nssv1819619,nssv1819677,nssv1819645,nssv1819597,nssv1819654,nssv1819605,nssv1819644,nssv1819604,nssv1819655,nssv1819673,nssv1819637,nssv1819678,nssv1819646,nssv1819608,nssv1819685,nssv1819598,nssv1819661,nssv1819603,nssv1819629,nssv1819674,nssv1819682,nssv1819671,nssv1819630,nssv1819670,nssv1819636,nssv1819607,nssv1819628,nssv1819676,nssv1819639,nssv1819600,nssv1819648,nssv1819593,nssv1819657,nssv1819602,nssv1819631,nssv1819599,nssv1819680,nssv1819610,nssv1819656,nssv1819609,nssv1819649,nssv1819606,nssv1819640,nssv1819594,nssv1819653,nssv1819613,nssv1819666,nssv1819601,nssv1819686,nssv1819596,nssv1819643,nssv1819595,nssv1819658,nssv1819614,nssv1819624,nssv1819620,nssv1819659,nssv1819611,nssv1819632,nssv1819626,nssv1819679,nssv1819650,nssv1819662,nssv1819592,nssv1819647,nssv1819663,nssv1819618,nssv1819625,nssv1819641,nssv1819615,nssv1819687,nssv1819668,nssv1819688,nssv1819627,nssv1819617,nssv1819622,nssv1819642,nssv1819660,nssv1819665,nssv1819634,nssv1819664,nssv1819638,nssv1819651,nssv1819683 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1014333 1 220198408 220312201 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497580 M 29084 0 1 "" esv8316 1 220210400 220214380 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30757 M 1 0 0 "" esv1009077 1 220243602 220246943 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563806 M 3 0 1 "" HuRef nsv4676 1 220260875 220295068 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8131 M 9 1 0 "" NA12156 nsv832648 1 220299016 220451952 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441679 M 95 0 1 "" nsv478954 1 220319979 220319979 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016198 M 9 1 0 "" NA18507 esv1009780 1 220330144 220330144 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574735 M 3 1 0 "" HuRef esv3395548 1 220330146 220330146 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825110 M 185 1 0 "" NA19240 nsv160691 1 220330146 220330146 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179269 M 24 "" nsv475381 1 220348944 220348944 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020374 M 9 1 0 "" NA19240 esv2758998 1 220362590 220524936 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757771 M 270 3 2 "" NA06991,NA10854,NA12003,NA12762,NA18971 esv3427030 1 220362763 220362777 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673918 M 185 1 0 "" NA19239 esv3310092 1 220362766 220362767 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838346,essv7838560 M 185 2 0 "" NA12891,NA19238 nsv945305 1 220367996 220370994 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819690,nssv1819730,nssv1819766,nssv1819754,nssv1819769,nssv1819746,nssv1819771,nssv1819748,nssv1819691,nssv1819761,nssv1819694,nssv1819749,nssv1819702,nssv1819737,nssv1819767,nssv1819726,nssv1819775,nssv1819742,nssv1819708,nssv1819764,nssv1819705,nssv1819751,nssv1819695,nssv1819780,nssv1819718,nssv1819744,nssv1819772,nssv1819778,nssv1819720,nssv1819732,nssv1819704,nssv1819781,nssv1819696,nssv1819752,nssv1819697,nssv1819736,nssv1819770,nssv1819743,nssv1819703,nssv1819716,nssv1819706,nssv1819727,nssv1819707,nssv1819734,nssv1819774,nssv1819779,nssv1819710,nssv1819725,nssv1819700,nssv1819758,nssv1819768,nssv1819750,nssv1819773,nssv1819745,nssv1819692,nssv1819728,nssv1819713,nssv1819753,nssv1819699,nssv1819740,nssv1819717,nssv1819741,nssv1819711,nssv1819733,nssv1819693,nssv1819777,nssv1819709,nssv1819763,nssv1819698,nssv1819719,nssv1819701,nssv1819762,nssv1819783,nssv1819755,nssv1819735,nssv1819721,nssv1819759,nssv1819776,nssv1819747,nssv1819756,nssv1819722,nssv1819712,nssv1819738,nssv1819729,nssv1819784,nssv1819731,nssv1819724,nssv1819785,nssv1819760,nssv1819765,nssv1819723,nssv1819782,nssv1819715,nssv1819757,nssv1819714,nssv1819689,nssv1819739 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv521614 1 220369770 220384264 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698232 M 2026 0 1 "" esv2286357 1 220378264 220378681 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4681004 M 1 0 1 "" NA18507 esv1226082 1 220378753 220378753 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4262628 M 2 1 0 "" HuRef esv1196079 1 220378912 220378912 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4092240 M 2 1 0 "" HuRef esv1007260 1 220391649 220397269 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565603 M 3 0 1 "" HuRef esv3431783 1 220392652 220393850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692125 M 185 1 0 "" NA19239 nsv511146 1 220433231 220446861 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625821 M 1 0 1 "" 1 nsv508696 1 220434163 220464569 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620153 M 4 0 1 "" NA15510 nsv947471 1 220439417 220445425 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2766537 M 97 0 1 "" HGDP00998 nsv8813 1 220440440 220449978 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv24004,nssv27847,nssv24900,nssv23071,nssv24897,nssv23392,nssv24278,nssv25957,nssv24907,nssv22085,nssv26707,nssv27151,nssv20750,nssv28203,nssv25178 M 31 13 2 "" NA10839,NA10847,NA11830,NA18517,NA18537,NA18563,NA18853,NA18860,NA18942,NA18972,NA18975,NA19007,NA19132,NA19221,NA19240 nsv820720 1 220440446 220447282 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420958 M 1 0 1 "" NA10851 nsv826764 1 220440446 220447949 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440174,nssv1440865,nssv1424792,nssv1421503,nssv1428868,nssv1426439,nssv1428071,nssv1423178,nssv1429609,nssv1430395,nssv1431126,nssv1433470 M 31 0 12 "" AK10,AK12,AK14,AK16,AK18,AK2,AK6,NA18526,NA18564,NA18969,NA18997,NA18999 esv27165 1 220440566 220447122 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19109 M 40 15 3 "" NA06985,NA11894,NA11995,NA12239,NA12489,NA12749,NA12776,NA18505,NA18517,NA18523,NA18907,NA19099,NA19108,NA19114,NA19147,NA19225,NA19240,NA19257 esv993430 1 220440566 220447122 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586727 M 3 1 0 "" HuRef nsv511733 1 220440678 220447775 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626378 M 1 0 1 "" 1 dgv823n54 1 220441341 220444084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549229,nsv549228 M 17421 0 2 "" dgv824n54 1 220441341 220445131 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549230,nsv549232,nsv549233,nsv549236 M 17421 0 19 "" dgv825n54 1 220441341 220447047 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549237,nsv549231,nsv549234 M 17421 0 215 "" nsv819121 1 220441714 220447786 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419753 M 2 1 0 "" AK1 nsv549235 1 220442232 220444431 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737213 M 17421 0 1 "" esv1010113 1 220442838 220445427 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586859 M 3 1 0 "" HuRef nsv826775 1 220442838 220445427 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1439506 M 31 0 1 "" NA18537 nsv549238 1 220443253 220445131 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737292 M 17421 0 1 "" esv2421948 1 220443401 220443721 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5003428,essv5029869,essv5021371,essv5027089,essv5147259,essv5045973,essv5038673,essv5060360,essv5056809,essv5125334,essv5005145,essv5034912,essv5034485,essv5015466,essv5122744,essv5105746,essv5024450,essv5018242,essv5044410,essv5150956,essv5157556,essv5044768,essv5002053,essv5145892,essv5159380,essv5102523,essv5043406,essv5110807,essv5038950,essv5006532,essv5127131,essv5069561,essv5122798,essv5082771,essv5021749,essv5126497,essv5037862,essv5090934,essv5048355,essv5011817,essv5085114,essv5060206,essv5119252,essv5060538,essv5095220,essv5070412,essv5002903,essv5032426,essv5103303,essv5076954,essv5006630,essv5121531,essv5103940,essv5056092,essv5031648,essv5026026,essv5072717,essv5078975,essv5059116,essv5099212,essv5006083,essv5016114,essv5048998,essv5116697,essv5009451,essv5010932,essv5081141,essv5120115,essv5116195,essv5023893,essv5142899,essv5089911,essv5076194,essv5149115,essv5137165,essv5084104,essv5019708,essv5141475,essv5146649,essv5119545,essv5121229,essv5091458,essv5091109,essv5159019,essv5109103,essv5129403,essv5112953,essv5044234,essv5121416,essv5088893,essv5106394,essv5070658,essv5091433,essv5123011,essv5152542,essv5105243,essv5019996,essv5081560,essv5095601,essv5084725,essv5143165,essv5152795,essv5073397,essv5062020,essv5136530,essv5133862,essv5038535,essv5075928,essv5111588,essv5048195,essv5085332,essv5026598,essv5088805,essv5115756,essv5112443,essv5150871,essv5145102,essv5140241,essv5133890,essv5089963,essv5056230,essv5028273,essv5096362,essv5100477,essv5050397,essv5158024,essv5119474,essv5018949,essv5075411,essv5135002,essv5147416,essv5112315,essv5010214,essv5152252,essv5104319,essv5110170,essv5084146,essv5034030,essv5127987,essv5071659,essv5022009,essv5040786,essv5057404,essv5074037,essv5157208,essv5034402,essv5076483,essv5027135,essv5132106,essv5028117,essv5160283,essv5131890,essv5019143,essv5075304,essv5123949,essv5002993,essv5048486,essv5053594,essv5142460,essv5127001,essv5003853,essv5153525,essv5028839,essv5078732,essv5017012,essv5118910,essv5098913,essv5051026,essv5044692,essv5116996,essv5076949,essv5085916,essv5091267,essv5069001,essv5047712,essv5097377,essv5160482,essv5114553,essv5135023,essv5028399,essv5024314,essv5072888,essv5149830,essv5160227,essv5042045,essv5009993,essv5112977,essv5050169,essv5002436,essv5155214,essv5137461,essv5131827,essv5079231,essv5123745,essv5157061,essv5124446,essv5039132,essv5149767,essv5104731,essv5010317,essv5084622,essv5114219,essv5130643,essv5135485,essv5137862,essv5002874,essv5125744,essv5126576,essv5097552,essv5112557,essv5070064,essv5064930,essv5138437,essv5052757,essv5087539,essv5074742,essv5126471,essv5024081,essv5129882,essv5001964,essv5020840,essv5016902,essv5113533,essv5131450,essv5156826,essv5083451,essv5138789,essv5096964,essv5053126,essv5051553,essv5091164,essv5156961,essv5075294,essv5103615,essv5143666,essv5113833,essv5058286,essv5050540,essv5016725,essv5007941,essv5054459,essv5045654,essv5089543,essv5017531,essv5151250,essv5083967,essv5148811,essv5003155,essv5009556,essv5057546,essv5028105,essv5036338,essv5051570,essv5057111,essv5155075,essv5054357,essv5099957,essv5059421,essv5107161,essv5088773,essv5146062,essv5071257,essv5097352,essv5075756,essv5116548,essv5119283,essv5010514,essv5087848,essv5023511,essv5080613,essv5066533,essv5082930,essv5150812,essv5072004,essv5076856,essv5152301,essv5038508,essv5117135,essv5110528,essv5067007,essv5150167,essv5048546,essv5057634,essv5065889,essv5074341,essv5142888,essv5048267,essv5112441,essv5044489,essv5151776,essv5130429,essv5023465,essv5160607,essv5068495,essv5027977,essv5159633,essv5075881,essv5132704,essv5135072,essv5025036,essv5027522,essv5128667,essv5051594,essv5050240,essv5154567,essv5004762,essv5083818,essv5138575,essv5134653,essv5064570,essv5122871,essv5108908,essv5019725,essv5125347,essv5032026,essv5050726,essv5133830,essv5133113,essv5142924,essv5045572,essv5060863,essv5076601,essv5135449,essv5043605,essv5151403,essv5012839,essv5092944,essv5045868,essv5145183,essv5122408,essv5107837,essv5077890,essv5046400,essv5020889,essv5122143,essv5109035,essv5086437,essv5130047,essv5155594,essv5147703,essv5152382,essv5097343,essv5103693,essv5130938,essv5103924,essv5085616,essv5054463,essv5052433,essv5158412,essv5037245,essv5022745,essv5109939,essv5156136,essv5018036,essv5003512,essv5031402,essv5085284,essv5081790,essv5035086,essv5101331,essv5159885,essv5098556,essv5033557,essv5075268,essv5055220,essv5067100,essv5135887,essv5144690,essv5042584,essv5132596,essv5011826,essv5099145,essv5104537,essv5009553,essv5127745,essv5142028,essv5052170,essv5054161,essv5019999,essv5138037,essv5146027,essv5160750,essv5154616,essv5139820,essv5112330,essv5091743,essv5107708,essv5090490,essv5021470,essv5113881,essv5118487,essv5154598,essv5030835,essv5138923,essv5010950,essv5012570,essv5114058,essv5059454,essv5061441,essv5118707,essv5063051,essv5050710,essv5027585,essv5040921,essv5129072,essv5020366,essv5002524,essv5019426,essv5106225,essv5065658,essv5057654,essv5028140,essv5138722,essv5079943,essv5159706,essv5128518,essv5135061,essv5077871,essv5122069,essv5054055,essv5100263,essv5035988,essv5004206,essv5152370,essv5007006,essv5052498,essv5096486,essv5063869,essv5148325,essv5097348,essv5155859,essv5026833,essv5119258,essv5078422,essv5008032,essv5050344,essv5051403,essv5124632,essv5061648,essv5056614,essv5121367,essv5139614,essv5070520,essv5081086,essv5122993,essv5122827,essv5011711,essv5136351,essv5106836,essv5096529,essv5019993,essv5100692,essv5130493,essv5079222,essv5069246,essv5128932,essv5136442,essv5003719,essv5010793,essv5015537,essv5088620,essv5132468,essv5124727,essv5124559,essv5049496,essv5122393,essv5107564,essv5059841,essv5060493,essv5143635,essv5058556,essv5158351,essv5088812,essv5120299,essv5160692,essv5100458,essv5088361,essv5009417,essv5072077,essv5016449,essv5047172,essv5157915,essv5055797,essv5073277,essv5070700,essv5045818,essv5021212,essv5086672,essv5012478,essv5030389,essv5155031,essv5015731,essv5009851,essv5117079,essv5084061,essv5052212,essv5150266,essv5073329,essv5061893,essv5024492,essv5059446,essv5158341,essv5158153,essv5009866,essv5024589,essv5050131,essv5032979,essv5137276,essv5119864,essv5022119,essv5009381,essv5142996,essv5016110,essv5002765,essv5051073,essv5127891,essv5010628,essv5136913,essv5005282,essv5081630,essv5072079,essv5016852,essv5074825,essv5134105,essv5144361,essv5098841,essv5147954,essv5023427,essv5047492,essv5116153,essv5052093,essv5052798,essv5002911,essv5087227,essv5004970,essv5004044,essv5096734,essv5103445,essv5027202,essv5067942,essv5099399 M 1184 0 541 "" NA06984,NA06989,NA06994,NA06995,NA07000,NA07022,NA07029,NA07031,NA07037,NA07045,NA07055,NA07345,NA07346,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10836,NA10837,NA10838,NA10845,NA10847,NA10850,NA10852,NA10855,NA10859,NA10863,NA11831,NA11832,NA11882,NA11892,NA11917,NA11919,NA11931,NA11992,NA11993,NA11994,NA12003,NA12005,NA12006,NA12044,NA12045,NA12057,NA12144,NA12145,NA12154,NA12155,NA12234,NA12239,NA12248,NA12272,NA12275,NA12287,NA12335,NA12336,NA12340,NA12341,NA12343,NA12375,NA12376,NA12383,NA12399,NA12546,NA12707,NA12716,NA12740,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12762,NA12763,NA12767,NA12778,NA12801,NA12802,NA12813,NA12814,NA12828,NA12832,NA12842,NA12843,NA12865,NA12873,NA12874,NA12878,NA12889,NA12891,NA12892,NA17965,NA17970,NA17972,NA17974,NA17975,NA17976,NA17982,NA17988,NA17989,NA17996,NA17998,NA18102,NA18117,NA18125,NA18131,NA18140,NA18147,NA18148,NA18150,NA18154,NA18157,NA18158,NA18160,NA18162,NA18484,NA18486,NA18497,NA18498,NA18500,NA18503,NA18504,NA18507,NA18509,NA18511,NA18516,NA18518,NA18520,NA18529,NA18532,NA18536,NA18537,NA18543,NA18546,NA18555,NA18559,NA18561,NA18564,NA18571,NA18576,NA18577,NA18579,NA18594,NA18596,NA18602,NA18609,NA18610,NA18615,NA18617,NA18631,NA18639,NA18640,NA18642,NA18645,NA18647,NA18674,NA18694,NA18702,NA18704,NA18745,NA18747,NA18748,NA18857,NA18858,NA18863,NA18868,NA18871,NA18872,NA18909,NA18911,NA18912,NA18916,NA18917,NA18923,NA18925,NA18930,NA18939,NA18948,NA18952,NA18953,NA18969,NA18977,NA18978,NA18990,NA18995,NA18997,NA18998,NA18999,NA19001,NA19002,NA19027,NA19036,NA19038,NA19054,NA19056,NA19058,NA19065,NA19068,NA19072,NA19083,NA19087,NA19088,NA19095,NA19096,NA19097,NA19101,NA19116,NA19117,NA19122,NA19123,NA19128,NA19129,NA19140,NA19141,NA19143,NA19146,NA19149,NA19150,NA19151,NA19159,NA19161,NA19176,NA19179,NA19180,NA19181,NA19183,NA19190,NA19192,NA19193,NA19194,NA19197,NA19200,NA19204,NA19207,NA19209,NA19211,NA19224,NA19226,NA19236,NA19238,NA19247,NA19249,NA19257,NA19258,NA19309,NA19311,NA19313,NA19314,NA19315,NA19317,NA19327,NA19347,NA19352,NA19373,NA19375,NA19376,NA19377,NA19380,NA19382,NA19383,NA19385,NA19390,NA19391,NA19393,NA19398,NA19399,NA19428,NA19429,NA19431,NA19435,NA19438,NA19439,NA19440,NA19444,NA19452,NA19456,NA19466,NA19467,NA19469,NA19471,NA19473,NA19474,NA19649,NA19650,NA19651,NA19656,NA19660,NA19675,NA19678,NA19684,NA19686,NA19703,NA19705,NA19712,NA19716,NA19718,NA19723,NA19724,NA19725,NA19746,NA19759,NA19760,NA19761,NA19762,NA19763,NA19771,NA19772,NA19773,NA19777,NA19779,NA19780,NA19782,NA19784,NA19795,NA19796,NA19900,NA19901,NA19904,NA19908,NA19916,NA19918,NA19919,NA19982,NA19983,NA20126,NA20128,NA20129,NA20279,NA20281,NA20282,NA20284,NA20297,NA20300,NA20301,NA20302,NA20317,NA20349,NA20356,NA20357,NA20358,NA20359,NA20504,NA20505,NA20506,NA20508,NA20509,NA20512,NA20518,NA20519,NA20522,NA20524,NA20525,NA20527,NA20528,NA20530,NA20531,NA20534,NA20535,NA20538,NA20541,NA20542,NA20543,NA20586,NA20588,NA20756,NA20758,NA20759,NA20765,NA20766,NA20768,NA20770,NA20771,NA20772,NA20785,NA20786,NA20787,NA20790,NA20792,NA20795,NA20797,NA20801,NA20803,NA20805,NA20807,NA20808,NA20809,NA20810,NA20811,NA20815,NA20826,NA20828,NA20851,NA20856,NA20859,NA20870,NA20872,NA20873,NA20874,NA20875,NA20876,NA20879,NA20881,NA20883,NA20884,NA20885,NA20888,NA20889,NA20890,NA20891,NA20892,NA20896,NA20899,NA20901,NA20902,NA20903,NA20907,NA20910,NA20911,NA21086,NA21088,NA21089,NA21090,NA21091,NA21092,NA21098,NA21104,NA21105,NA21107,NA21109,NA21112,NA21113,NA21116,NA21118,NA21119,NA21137,NA21141,NA21142,NA21143,NA21144,NA21297,NA21300,NA21301,NA21302,NA21303,NA21307,NA21311,NA21312,NA21313,NA21314,NA21316,NA21317,NA21318,NA21336,NA21339,NA21344,NA21352,NA21353,NA21356,NA21357,NA21359,NA21363,NA21365,NA21366,NA21368,NA21379,NA21382,NA21384,NA21385,NA21386,NA21388,NA21389,NA21390,NA21402,NA21403,NA21404,NA21405,NA21414,NA21415,NA21417,NA21420,NA21434,NA21435,NA21440,NA21448,NA21453,NA21473,NA21475,NA21477,NA21478,NA21479,NA21486,NA21487,NA21488,NA21489,NA21491,NA21494,NA21510,NA21512,NA21513,NA21514,NA21517,NA21519,NA21520,NA21522,NA21524,NA21525,NA21526,NA21527,NA21529,NA21578,NA21580,NA21582,NA21583,NA21587,NA21596,NA21597,NA21608,NA21613,NA21614,NA21615,NA21616,NA21617,NA21631,NA21632,NA21634,NA21636,NA21647,NA21648,NA21678,NA21685,NA21686,NA21693,NA21716,NA21722,NA21740,NA21741,NA21768,NA21784,NA21825 nsv945306 1 220445425 220449556 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820741,nssv1820748,nssv1820734,nssv1820742,nssv1819792,nssv1819786,nssv1820792,nssv1820735,nssv1820721,nssv1820766,nssv1820724,nssv1820759,nssv1820794,nssv1820773,nssv1820730,nssv1820799,nssv1819791,nssv1820778,nssv1820793,nssv1820745,nssv1820789,nssv1820786,nssv1820791,nssv1820765,nssv1820729,nssv1820777,nssv1819793,nssv1820768,nssv1820726,nssv1820779,nssv1820788,nssv1820770,nssv1820731,nssv1820754,nssv1820723,nssv1820743,nssv1819788,nssv1820801,nssv1819794,nssv1820760,nssv1820732,nssv1820744,nssv1820728,nssv1820756,nssv1820722,nssv1820774,nssv1820727,nssv1820783,nssv1820787,nssv1820775,nssv1820739,nssv1820782,nssv1820790,nssv1820749,nssv1820720,nssv1820750,nssv1820795,nssv1820752,nssv1819787,nssv1820763,nssv1820725,nssv1820772,nssv1820796,nssv1820751,nssv1819795,nssv1820753,nssv1819789,nssv1820802,nssv1819790,nssv1820737,nssv1820738,nssv1820755,nssv1820804,nssv1820780,nssv1820747,nssv1820798,nssv1820785,nssv1820757,nssv1820740,nssv1820797,nssv1820803,nssv1820758,nssv1820784,nssv1820776,nssv1820771,nssv1820769,nssv1820733,nssv1820805,nssv1820764,nssv1820806,nssv1820746,nssv1820736,nssv1820800,nssv1820767,nssv1820761,nssv1820762,nssv1820781 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8824 1 220450960 220456508 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22754,nssv27281 M 31 0 2 "" NA18517,NA18552 nsv1013943 1 220537523 220562111 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482803,nssv3501274 M 29084 0 2 "" nsv826786 1 220599026 220635453 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431127 M 31 0 1 "" AK18 nsv826797 1 220615996 220617850 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431868 M 31 0 1 "" AK20 nsv511734 1 220616030 220617911 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626379 M 1 0 1 "" 1 esv3431948 1 220645721 220645740 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678371 M 185 1 0 "" NA19240 esv25737 1 220705662 220760196 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17973 M 40 1 0 "" NA18502 nsv945308 1 220707789 220717694 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605288,nssv2605256,nssv2605284,nssv2605275,nssv2605286,nssv2605255,nssv2605229,nssv2605262,nssv2605218,nssv2605276,nssv2605230,nssv2605248,nssv2605290,nssv2605260,nssv2605226,nssv2605261,nssv2605291,nssv2605253,nssv2605228,nssv2605246,nssv2605222,nssv2605263,nssv2605292,nssv2605247,nssv2605243,nssv2605254,nssv2605215,nssv2605271,nssv2605232,nssv2605280,nssv2605289,nssv2605244,nssv2605227,nssv2605282,nssv2605231,nssv2605264,nssv2605285,nssv2605269,nssv2605238,nssv2605278,nssv2605220,nssv2605265,nssv2605223,nssv2605259,nssv2605224,nssv2605279,nssv2605287,nssv2605281,nssv2605221,nssv2605249,nssv2605217,nssv2605267,nssv2605242,nssv2605245,nssv2605233,nssv2605214,nssv2605225,nssv2605283,nssv2605216,nssv2605268,nssv2605219,nssv2605240,nssv2605293,nssv2605272,nssv2605236,nssv2605241,nssv2605235,nssv2605270,nssv2605234,nssv2605257,nssv2605237,nssv2605251,nssv2605277,nssv2605250,nssv2605252,nssv2605266,nssv2605273,nssv2605258,nssv2605239,nssv2605274 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945307 1 220707789 220759917 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820818,nssv1818839,nssv1820826,nssv1818787,nssv1820811,nssv1818803,nssv1820815,nssv1818808,nssv1818832,nssv1818813,nssv1820821,nssv1818818,nssv1820827,nssv1818795,nssv1820813,nssv1818825,nssv1818831,nssv1818790,nssv1820809,nssv1820807,nssv1818836,nssv1818789,nssv1818829,nssv1818816,nssv1820812,nssv1818802,nssv1820810,nssv1818819,nssv1820820,nssv1818777,nssv1820824,nssv1818812,nssv1820819,nssv1818820,nssv1818781,nssv1818822,nssv1818779,nssv1818814,nssv1818834,nssv1818798,nssv1820829,nssv1818807,nssv1820823,nssv1818794,nssv1820814,nssv1818783,nssv1820817,nssv1818845,nssv1820816,nssv1818838,nssv1818835,nssv1818785,nssv1818828,nssv1818817,nssv1818827,nssv1818797,nssv1820825,nssv1818784,nssv1820822,nssv1818773,nssv1818830,nssv1818782,nssv1818778,nssv1818801,nssv1818833,nssv1818809,nssv1820808,nssv1818840,nssv1818774,nssv1818824,nssv1820828,nssv1818841,nssv1818806,nssv1818804,nssv1818837,nssv1818811,nssv1818810,nssv1818844,nssv1818780,nssv1818805,nssv1818826,nssv1818846,nssv1818792,nssv1818775,nssv1818788,nssv1818821,nssv1818843,nssv1818823,nssv1818791,nssv1818786,nssv1818842,nssv1818793,nssv1818796,nssv1818815,nssv1818776,nssv1818799,nssv1818800 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2762168 1 220784321 220803477 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005722 M 1109 0 1 HHIPL2,TAF1A SW_1209 esv2395464 1 220838249 220838579 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4552734 M 1 0 1 "" NA18507 esv2603048 1 220879265 220880755 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5289036 M 1 0 1 MIA3 NA18507 nsv945309 1 220908590 220910389 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1818856,nssv1819811,nssv1819854,nssv1819862,nssv1819851,nssv1819844,nssv1818861,nssv1819818,nssv1818855,nssv1818870,nssv1818862,nssv1819830,nssv1819848,nssv1819817,nssv1818852,nssv1819801,nssv1818854,nssv1819836,nssv1818853,nssv1819860,nssv1819852,nssv1819843,nssv1818863,nssv1819831,nssv1818866,nssv1819812,nssv1818859,nssv1819824,nssv1818867,nssv1819798,nssv1819850,nssv1819833,nssv1819849,nssv1819813,nssv1818868,nssv1819834,nssv1819855,nssv1819863,nssv1818849,nssv1819808,nssv1818857,nssv1819846,nssv1818865,nssv1819864,nssv1819802,nssv1819814,nssv1818864,nssv1819823,nssv1819856,nssv1819816,nssv1818851,nssv1819810,nssv1818858,nssv1819825,nssv1819800,nssv1819826,nssv1818869,nssv1819807,nssv1819857,nssv1819835,nssv1819853,nssv1819809,nssv1818850,nssv1819861,nssv1819799,nssv1819840,nssv1818871,nssv1819832,nssv1818860,nssv1819797,nssv1818848,nssv1819827,nssv1819819,nssv1819822,nssv1819858,nssv1819859,nssv1819815,nssv1819865,nssv1819837,nssv1819828,nssv1819803,nssv1819829,nssv1819845,nssv1819805,nssv1819821,nssv1819820,nssv1819838,nssv1819804,nssv1819806,nssv1819841,nssv1819796,nssv1819867,nssv1819839,nssv1819847,nssv1818847,nssv1819866,nssv1819842 M 97 10 0 AIDA HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3335605 1 220919241 220919260 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598280 M 185 1 0 AIDA NA12815 esv1787433 1 220937320 220937320 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4102427 M 2 1 0 AIDA HuRef esv3368539 1 220982774 220982781 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863822 M 185 1 0 FAM177B NA12005 esv2210399 1 221008258 221008678 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4546903 M 1 0 1 "" NA18507 nsv442589 1 221083948 221090227 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619669,nssv1619683,nssv1619672,nssv1619677,nssv1619681,nssv1619706,nssv1619698,nssv1619674,nssv1619705,nssv1619694,nssv1619691,nssv1619696,nssv1619701,nssv1619670,nssv1619685,nssv1619697,nssv1619680,nssv1619686,nssv1619692,nssv1619682,nssv1619684,nssv1619699,nssv1619704,nssv1619700,nssv1619687,nssv1619671,nssv1619689,nssv1619703,nssv1619690,nssv1619678,nssv1619673,nssv1619679,nssv1619676,nssv1619693,nssv1619695,nssv1619675,nssv1619702,nssv1619688 M 270 0 38 DISP1 NA07019,NA07022,NA07345,NA07357,NA10830,NA10831,NA10835,NA10838,NA10846,NA10851,NA10859,NA10861,NA11831,NA11881,NA11994,NA12003,NA12004,NA12057,NA12145,NA12155,NA12236,NA12248,NA12249,NA12717,NA12740,NA12750,NA12751,NA12753,NA12761,NA12762,NA12801,NA12812,NA12865,NA12875,NA18572,NA18949,NA18952,NA18994 esv5267 1 221127388 221127839 CNV loss Wang_et_al_2008 18987735 Sequencing essv27708 M 1 0 1 DISP1 YH esv998735 1 221127444 221127762 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569934 M 3 0 1 DISP1 HuRef esv991453 1 221191432 221191432 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581682 M 3 1 0 DISP1 HuRef esv1553806 1 221191435 221191435 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3673687 M 2 1 0 DISP1 HuRef esv1971876 1 221271179 221271607 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4661119 M 1 0 1 "" NA18507 esv993625 1 221271322 221271400 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571180 M 3 0 1 "" HuRef nsv159885 1 221271323 221271401 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178463 M 24 "" esv1187112 1 221271399 221271478 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3764817 M 2 0 1 "" HuRef esv9499 1 221304778 221304974 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31940 M 1 0 0 "" esv1004280 1 221339898 221343726 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565324 M 3 0 1 "" HuRef esv1122523 1 221359946 221359946 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4067091 M 2 1 0 TLR5 HuRef nsv832659 1 221361390 221505110 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441680 M 95 1 0 SUSD4,TLR5 nsv516810 1 221534959 221535355 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv674189,nssv659350,nssv671082,nssv692956 M 2026 4 0 SUSD4 nsv518979 1 221534959 221554933 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696446 M 2026 1 0 SUSD4 nsv1010798 1 221564768 221605612 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705518 M 29084 1 0 SUSD4 nsv826809 1 221602655 221605288 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432576 M 31 1 0 SUSD4 NA18972 nsv832670 1 221628394 221750004 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441681 M 95 0 1 C1orf65 nsv4687 1 221631703 221676985 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4989 M 9 0 1 C1orf65 NA19129 nsv517708 1 221633890 221634426 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv677711,nssv684089,nssv671037,nssv662997,nssv654747,nssv658315,nssv669588,nssv688017,nssv656875,nssv656191,nssv652917,nssv683331,nssv663272,nssv674673,nssv676838,nssv687388,nssv657651,nssv660426,nssv674072,nssv679393,nssv656993,nssv680691,nssv681071 M 2026 0 23 C1orf65 nsv473972 1 221679840 221679840 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014314 M 9 1 0 "" NA12156 nsv818822 1 221681361 221698668 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417824 M 112 1 0 "" NA18852 nsv518381 1 221685390 221711879 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695812 M 2026 1 0 "" nsv549239 1 221685390 221711879 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737294,nssv737293 M 17421 2 0 "" esv2764237 1 221686357 221711984 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006995,essv7006998,essv7006997,essv7006994,essv7006996 M 1109 5 0 "" RW_0121,RW_0500,RW_0504,RW_0631,RW_0644 nsv998267 1 221686357 221711984 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483949,nssv3705519 M 29084 2 0 "" esv3302974 1 221693522 221708817 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731788 M 185 1 0 "" NA19257 esv26987 1 221693527 221708769 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20135 M 40 1 0 "" NA19257 nsv1004378 1 221694801 221704837 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488314 M 29084 1 0 "" dgv578n100 1 221694801 221711984 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007223,nsv1013231,nsv1010813,nsv1006663,nsv1004791,nsv1001272,nsv1015043 M 29084 34 0 "" nsv1004111 1 221694801 221717649 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487646 M 29084 1 0 "" esv2764046 1 221694813 221711984 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005745,essv7005733 M 1109 2 0 "" SW_1326,SW_1332 esv2758999 1 221694997 221711029 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756885 M 270 1 0 "" NA18852 nsv521539 1 221695053 221708063 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698155 M 2026 1 0 "" nsv549240 1 221695053 221709269 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737295 M 17421 1 0 "" nsv479693 1 221735502 221735502 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016402 M 9 0 0 "" nsv475041 1 221737380 221737380 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020030 M 9 1 0 "" NA18956 nsv479982 1 221738654 221738654 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014613 M 9 0 0 "" nsv479479 1 221738753 221738753 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012047 M 9 0 0 "" nsv479139 1 221743029 221743029 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014077 M 9 0 0 "" nsv480479 1 221743624 221743624 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017786 M 9 0 0 "" nsv479580 1 221743631 221743631 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017082 M 9 0 0 "" nsv479079 1 221743913 221743913 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012372 M 9 0 0 "" nsv480426 1 221745034 221745034 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012215 M 9 0 0 "" nsv480231 1 221745059 221745059 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019355 M 9 0 0 "" nsv481184 1 221748116 221748116 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011571 M 9 0 0 "" nsv520420 1 221748674 221759785 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697405 M 2026 0 1 "" nsv478267 1 221751461 221751461 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013922 M 9 1 0 "" NA18507 nsv480492 1 221752411 221752411 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015682 M 9 0 0 "" nsv480807 1 221752554 221752554 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014109 M 9 0 0 "" nsv479994 1 221754030 221754030 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012041 M 9 0 0 "" nsv479516 1 221755539 221755539 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015464 M 9 0 0 "" nsv474347 1 221756154 221756154 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019651 M 9 1 0 "" NA18507 nsv480619 1 221757058 221757058 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012900 M 9 0 0 "" nsv479522 1 221757111 221757111 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019503 M 9 0 0 "" nsv832681 1 221764671 222069314 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441682 M 95 1 0 CAPN2,CAPN8,TP53BP2 esv3414527 1 221864478 221864753 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740949 M 185 1 0 CAPN8 NA19240 esv1919956 1 221889807 221890233 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4841130 M 1 0 1 CAPN8 NA18507 esv27704 1 221889829 221891318 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18764 M 40 0 5 CAPN8 NA18909,NA19129,NA19147,NA19190,NA19240 nsv821216 1 221889829 221891318 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420969 M 1 0 1 CAPN8 NA10851 esv1388923 1 221890741 221891105 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4178746 M 2 0 1 CAPN8 HuRef nsv479737 1 221894035 221894035 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017951 M 9 0 0 CAPN8 nsv945310 1 221897921 221898613 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819875,nssv1819924,nssv1819877,nssv1819913,nssv1819952,nssv1819927,nssv1819881,nssv1819918,nssv1819948,nssv1819894,nssv1819878,nssv1819964,nssv1819873,nssv1819944,nssv1819885,nssv1819939,nssv1819949,nssv1819868,nssv1819884,nssv1819898,nssv1819954,nssv1819902,nssv1819887,nssv1819914,nssv1819883,nssv1819908,nssv1819880,nssv1819933,nssv1819879,nssv1819941,nssv1819869,nssv1819940,nssv1819950,nssv1819961,nssv1819897,nssv1819928,nssv1819876,nssv1819930,nssv1819951,nssv1819931,nssv1819945,nssv1819957,nssv1819871,nssv1819911,nssv1819886,nssv1819960,nssv1819947,nssv1819895,nssv1819899,nssv1819906,nssv1819892,nssv1819909,nssv1819889,nssv1819959,nssv1819874,nssv1819923,nssv1819888,nssv1819922,nssv1819882,nssv1819921,nssv1819870,nssv1819907,nssv1819896,nssv1819943,nssv1819890,nssv1819932,nssv1819953,nssv1819937,nssv1819872,nssv1819915,nssv1819946,nssv1819904,nssv1819938,nssv1819919,nssv1819929,nssv1819900,nssv1819956,nssv1819905,nssv1819912,nssv1819934,nssv1819942,nssv1819926,nssv1819925,nssv1819920,nssv1819963,nssv1819955,nssv1819935,nssv1819891,nssv1819916,nssv1819962,nssv1819917,nssv1819958,nssv1819910,nssv1819901,nssv1819893,nssv1819903,nssv1819936 M 97 10 0 CAPN8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv479266 1 221900770 221900770 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013062 M 9 0 0 CAPN8 nsv479801 1 221902105 221902105 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016036 M 9 0 0 CAPN8 nsv479837 1 221903781 221903781 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013133 M 9 0 0 CAPN8 nsv475307 1 221903793 221903793 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012221 M 9 1 0 CAPN8 NA19240 nsv479450 1 221906154 221906154 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018799 M 9 0 0 CAPN8 nsv481510 1 221906756 221906756 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016973 M 9 0 0 CAPN8 nsv474099 1 221907203 221907203 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016457 M 9 1 0 CAPN8 NA12156 nsv480072 1 221907241 221907241 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011671 M 9 0 0 CAPN8 nsv481361 1 221907526 221907526 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013806 M 9 0 0 CAPN8 nsv480006 1 221907556 221907556 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017994 M 9 0 0 CAPN8 nsv480449 1 221907842 221907842 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019643 M 9 0 0 CAPN8 nsv481088 1 221909846 221909846 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015146 M 9 0 0 CAPN8 nsv479272 1 221910026 221910026 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012778 M 9 0 0 CAPN8 nsv479114 1 221912095 221912095 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014982 M 9 0 0 CAPN8 nsv479800 1 221912647 221912647 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019060 M 9 0 0 CAPN8 nsv481348 1 221914410 221914410 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017331 M 9 0 0 CAPN8 nsv480187 1 221914548 221914548 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017969 M 9 0 0 CAPN8 nsv478790 1 221916303 221916303 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011844 M 9 1 0 CAPN8 NA18507 nsv479023 1 221917587 221917587 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018913 M 9 0 0 CAPN8 esv34082 1 221917641 222211132 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990554 M 270 0 0 CAPN2,CAPN8,TP53BP2 nsv475163 1 221918040 221918040 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015847 M 9 1 0 CAPN8 NA19240 nsv477673 1 221919257 221919257 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011892 M 9 1 0 CAPN8 NA18517 nsv479392 1 221919459 221919459 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013733 M 9 0 0 CAPN8 nsv475476 1 221920180 221920180 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018617 M 9 1 0 "" NA19240 nsv481599 1 221920656 221920656 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010769 M 9 0 0 "" nsv474811 1 221920803 221920803 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013906 M 9 1 0 "" NA19240 nsv481063 1 221922479 221922479 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017777 M 9 0 0 "" nsv481330 1 221923232 221923232 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011478 M 9 0 0 "" nsv479847 1 221923508 221923508 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020490 M 9 0 0 "" nsv480112 1 221927034 221927034 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020247 M 9 0 0 "" nsv481231 1 221927498 221927498 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019731 M 9 0 0 "" nsv475086 1 221929074 221929074 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016238 M 9 1 0 "" NA18956 nsv437346 1 221970404 221972155 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467227 M 60 0 1 CAPN2 NA10856 esv3307033 1 221978180 221978181 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7780807,essv7805821,essv7807418,essv7799627,essv7773085,essv7814478,essv7808337,essv7783356,essv7791214,essv7823321,essv7771438,essv7805300,essv7806357,essv7832771,essv7819842,essv7811244,essv7814219,essv7778086,essv7770217,essv7836102,essv7817045,essv7830496,essv7826448,essv7810811,essv7782960,essv7815836,essv7810041,essv7822845,essv7836529,essv7779597,essv7792007,essv7825580,essv7804408,essv7791486,essv7780630,essv7795176,essv7818502,essv7816070,essv7815080,essv7773232,essv7793367,essv7830391,essv7811908,essv7827983,essv7827586,essv7804004,essv7772491,essv7800461,essv7808963,essv7789289,essv7802260 M 185 51 0 CAPN2 NA11881,NA11920,NA11993,NA12045,NA12144,NA12287,NA12749,NA12763,NA12776,NA12872,NA18498,NA18501,NA18504,NA18507,NA18510,NA18511,NA18516,NA18519,NA18520,NA18523,NA18542,NA18547,NA18552,NA18566,NA18571,NA18573,NA18579,NA18603,NA18638,NA18853,NA18856,NA18858,NA18861,NA18871,NA18907,NA18940,NA18948,NA18956,NA18960,NA18961,NA18964,NA18969,NA19099,NA19108,NA19114,NA19116,NA19190,NA19225,NA19238,NA19239,NA19257 esv3310267 1 221978184 221978185 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838153,essv7837735 M 185 2 0 CAPN2 NA12878,NA12892 esv3402894 1 221978187 221978206 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598336,essv9598347 M 185 2 0 CAPN2 NA11881,NA12872 nsv520609 1 221998034 222013704 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv673218,nssv675983 M 2026 0 2 CAPN2 nsv521758 1 221998034 222020703 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694525 M 2026 0 1 CAPN2 esv2759000 1 222001843 222429786 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757772 M 270 1 5 CAPN2,FBXO28,TP53BP2 NA11840,NA12865,NA18547,NA18572,NA18949,NA18971 nsv4698 1 222024832 222041844 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3790 M 9 1 0 CAPN2,TP53BP2 NA12878 nsv945311 1 222110377 222112844 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819972,nssv1820060,nssv1820045,nssv1820055,nssv1819970,nssv1819991,nssv1820046,nssv1820006,nssv1819968,nssv1820033,nssv1820044,nssv1820000,nssv1820051,nssv1820035,nssv1819971,nssv1820052,nssv1819984,nssv1820014,nssv1819976,nssv1819998,nssv1820049,nssv1819999,nssv1819981,nssv1820024,nssv1819989,nssv1820015,nssv1820047,nssv1820041,nssv1820042,nssv1820036,nssv1819985,nssv1820007,nssv1820050,nssv1819995,nssv1820048,nssv1820061,nssv1819973,nssv1820011,nssv1819980,nssv1820018,nssv1819978,nssv1820030,nssv1819975,nssv1819965,nssv1819996,nssv1820005,nssv1819983,nssv1820028,nssv1819977,nssv1820027,nssv1819982,nssv1820037,nssv1819967,nssv1820038,nssv1819994,nssv1819992,nssv1819986,nssv1820025,nssv1819966,nssv1820054,nssv1819974,nssv1820023,nssv1819979,nssv1820002,nssv1819993,nssv1820016,nssv1820043,nssv1820021,nssv1819969,nssv1820056,nssv1819987,nssv1820020,nssv1820003,nssv1820010,nssv1820057,nssv1820029,nssv1820034,nssv1820040,nssv1820019,nssv1820013,nssv1820001,nssv1820004,nssv1820008,nssv1820009,nssv1820012,nssv1819990,nssv1819988,nssv1820039,nssv1820053,nssv1820026,nssv1820058,nssv1820022,nssv1819997,nssv1820031,nssv1820017,nssv1820032,nssv1820059 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945313 1 222115184 222127259 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821064,nssv1821042,nssv1820082,nssv1820102,nssv1820091,nssv1821079,nssv1820073,nssv1821073,nssv1820071,nssv1820087,nssv1820063,nssv1821080,nssv1821066,nssv1821043,nssv1821065,nssv1821082,nssv1820067,nssv1821081,nssv1821071,nssv1821061,nssv1820086,nssv1820088,nssv1820064,nssv1821062,nssv1821070,nssv1821038,nssv1821067,nssv1820097,nssv1820081,nssv1820092,nssv1820072,nssv1821049,nssv1820078,nssv1820062,nssv1821072,nssv1820089,nssv1821068,nssv1821044,nssv1820068,nssv1820095,nssv1821069,nssv1820096,nssv1820069,nssv1821040,nssv1820070,nssv1821037,nssv1820080,nssv1821054,nssv1820077,nssv1821030,nssv1820079,nssv1821057,nssv1820093,nssv1821046,nssv1820083,nssv1821055,nssv1820075,nssv1821056,nssv1820074,nssv1821050,nssv1820065,nssv1821034,nssv1821063,nssv1821028,nssv1820066,nssv1821032,nssv1820076,nssv1821036,nssv1820090,nssv1821053,nssv1820084,nssv1821051,nssv1821048,nssv1821059,nssv1821075,nssv1820103,nssv1821035,nssv1821041,nssv1821058,nssv1821039,nssv1821077,nssv1821031,nssv1821078,nssv1820100,nssv1821045,nssv1820094,nssv1821047,nssv1821060,nssv1821033,nssv1820099,nssv1820101,nssv1820098,nssv1821052,nssv1821076,nssv1821029,nssv1820085,nssv1821074 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522556 1 222128521 222142106 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705938 M 2026 0 1 "" esv24862 1 222141222 222246574 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15701,esv17549,esv17562 M 40 2 9 "" NA11894,NA12006,NA12239,NA12287,NA12414,NA12749,NA12776,NA18502,NA18858,NA19114,NA19225 nsv945315 1 222142842 222151960 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603905,nssv2603904,nssv2603909,nssv2603911,nssv2603910,nssv2603906,nssv2603912,nssv2603907,nssv2603913,nssv2603903,nssv2603908,nssv2603902 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945314 1 222142842 222195322 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821114,nssv1821125,nssv1818175,nssv1818168,nssv1821107,nssv1818167,nssv1821087,nssv1821113,nssv1821103,nssv1821122,nssv1818172,nssv1818157,nssv1821089,nssv1821120,nssv1818176,nssv1818161,nssv1818181,nssv1821131,nssv1818180,nssv1821121,nssv1821092,nssv1821106,nssv1821097,nssv1821135,nssv1821098,nssv1818170,nssv1821088,nssv1818171,nssv1821102,nssv1821109,nssv1818174,nssv1818164,nssv1821099,nssv1818163,nssv1818173,nssv1821134,nssv1818177,nssv1818166,nssv1821090,nssv1818162,nssv1821096,nssv1818159,nssv1821104,nssv1821119,nssv1821095,nssv1821137,nssv1821091,nssv1821127,nssv1821105,nssv1821108,nssv1821084,nssv1818158,nssv1821112,nssv1821130,nssv1821094,nssv1818169,nssv1821086,nssv1821083,nssv1821101,nssv1818160,nssv1821100,nssv1821117,nssv1818179,nssv1821118,nssv1821111,nssv1821136,nssv1821093,nssv1821129,nssv1821085,nssv1821123,nssv1818178,nssv1821115,nssv1818165,nssv1821132,nssv1821110,nssv1821133,nssv1821124,nssv1821126,nssv1821116,nssv1821128 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv8835 1 222142925 222163089 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23688,nssv22090 M 31 0 2 "" NA12802,NA18502 nsv947053 1 222151960 222153674 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603916,nssv2603924,nssv2603923,nssv2603925,nssv2603919,nssv2603918,nssv2603920,nssv2603922,nssv2603915,nssv2603921,nssv2603914,nssv2603917 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947054 1 222153674 222155534 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603927,nssv2603930,nssv2603932,nssv2603936,nssv2603928,nssv2603929,nssv2603931,nssv2603934,nssv2603935,nssv2603937,nssv2603926,nssv2603933 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947055 1 222155534 222161755 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603943,nssv2603942,nssv2603947,nssv2603948,nssv2603940,nssv2603941,nssv2603938,nssv2603949,nssv2603944,nssv2603946,nssv2603939,nssv2603945 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947057 1 222161755 222165643 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603960,nssv2603952,nssv2603961,nssv2603955,nssv2603954,nssv2603959,nssv2603953,nssv2603956,nssv2603958,nssv2603951,nssv2603957 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3891137 1 222163778 222256939 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25791338 M 3017 1 0 "" nsv947059 1 222165643 222167483 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2603973,nssv2603977,nssv2603965,nssv2603967,nssv2603972,nssv2603968,nssv2603969,nssv2603978,nssv2603966,nssv2604009,nssv2603970,nssv2603993,nssv2604002,nssv2604003,nssv2603984,nssv2603997,nssv2603975,nssv2604006,nssv2603991,nssv2603963,nssv2603971,nssv2604000,nssv2604001,nssv2603986,nssv2603998,nssv2603974,nssv2603988,nssv2603983,nssv2603990,nssv2603989,nssv2603996,nssv2603992,nssv2604004,nssv2603995,nssv2603987,nssv2604010,nssv2603994,nssv2603980,nssv2604007,nssv2603985,nssv2604005,nssv2603982,nssv2603999,nssv2603964,nssv2603979,nssv2604008,nssv2603981,nssv2603976 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947061 1 222167483 222169048 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604019,nssv2604029,nssv2604022,nssv2604058,nssv2604015,nssv2604041,nssv2604014,nssv2604027,nssv2604021,nssv2604030,nssv2604018,nssv2604046,nssv2604028,nssv2604060,nssv2604025,nssv2604037,nssv2604050,nssv2604043,nssv2604020,nssv2604026,nssv2604012,nssv2604053,nssv2604055,nssv2604040,nssv2604057,nssv2604045,nssv2604044,nssv2604048,nssv2604033,nssv2604039,nssv2604013,nssv2604056,nssv2604052,nssv2604047,nssv2604017,nssv2604024,nssv2604032,nssv2604035,nssv2604016,nssv2604054,nssv2604023,nssv2604051,nssv2604034,nssv2604038,nssv2604036,nssv2604042,nssv2604059,nssv2604031,nssv2604049 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947062 1 222169048 222170890 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604063,nssv2604062,nssv2604064,nssv2604089,nssv2604068,nssv2604098,nssv2604071,nssv2604095,nssv2604067,nssv2604092,nssv2604070,nssv2604106,nssv2604104,nssv2605341,nssv2604077,nssv2604078,nssv2604080,nssv2604075,nssv2604096,nssv2605340,nssv2604069,nssv2604084,nssv2604086,nssv2604076,nssv2604061,nssv2604100,nssv2604074,nssv2604093,nssv2604102,nssv2604087,nssv2604088,nssv2604082,nssv2604101,nssv2604079,nssv2604091,nssv2604065,nssv2604072,nssv2604105,nssv2604081,nssv2604099,nssv2604103,nssv2604085,nssv2604066,nssv2604083,nssv2604094,nssv2604090,nssv2604097,nssv2604073,nssv2604107 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv826n54 1 222170615 222283380 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549243,nsv549241 M 17421 4 0 "" nsv947063 1 222170890 222185610 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605349,nssv2605371,nssv2605348,nssv2605360,nssv2605352,nssv2605381,nssv2605345,nssv2605386,nssv2605351,nssv2605383,nssv2605344,nssv2605343,nssv2605355,nssv2605378,nssv2605387,nssv2605358,nssv2605373,nssv2605356,nssv2605379,nssv2605364,nssv2605369,nssv2605359,nssv2605389,nssv2605367,nssv2605363,nssv2605342,nssv2605374,nssv2605382,nssv2605368,nssv2605365,nssv2605380,nssv2605370,nssv2605366,nssv2605353,nssv2605354,nssv2605350,nssv2605357,nssv2605385,nssv2605361,nssv2605388,nssv2605362,nssv2605347,nssv2605376,nssv2605346,nssv2605377,nssv2605372,nssv2605375,nssv2605384 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv549242 1 222181920 222270541 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737302,nssv737301,nssv737300,nssv737299 M 17421 2 2 "" nsv947065 1 222185610 222195322 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605394,nssv2605416,nssv2605397,nssv2605418,nssv2605401,nssv2605411,nssv2605393,nssv2605410,nssv2605398,nssv2605434,nssv2605400,nssv2605431,nssv2605404,nssv2605395,nssv2605430,nssv2605422,nssv2605423,nssv2605428,nssv2605417,nssv2605402,nssv2605406,nssv2605413,nssv2605414,nssv2605424,nssv2605408,nssv2605420,nssv2605399,nssv2605419,nssv2605409,nssv2605432,nssv2605405,nssv2605421,nssv2605436,nssv2605437,nssv2605415,nssv2605407,nssv2605425,nssv2605427,nssv2605433,nssv2605412,nssv2605403,nssv2605426,nssv2605392,nssv2605435,nssv2605438,nssv2605429,nssv2605396,nssv2605391 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1065015 1 222191384 222191482 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4266736 M 2 0 1 "" HuRef nsv945317 1 222199989 222204696 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605512,nssv2605497,nssv2605449,nssv2605502,nssv2605517,nssv2605479,nssv2605516,nssv2605505,nssv2605442,nssv2605509,nssv2605513,nssv2605506,nssv2605443,nssv2605508,nssv2605448,nssv2605483,nssv2605510,nssv2605496,nssv2605514,nssv2605476,nssv2605468,nssv2605480,nssv2605441,nssv2605486,nssv2605454,nssv2605492,nssv2605464,nssv2605467,nssv2605457,nssv2605495,nssv2605451,nssv2605482,nssv2605456,nssv2605440,nssv2605458,nssv2605500,nssv2605469,nssv2605507,nssv2605519,nssv2605493,nssv2605511,nssv2605488,nssv2605461,nssv2605463,nssv2605453,nssv2605487,nssv2605450,nssv2605494,nssv2605452,nssv2605499,nssv2605515,nssv2605501,nssv2605462,nssv2605474,nssv2605447,nssv2605466,nssv2605445,nssv2605489,nssv2605444,nssv2605503,nssv2605455,nssv2605477,nssv2605446,nssv2605475,nssv2605460,nssv2605473,nssv2605459,nssv2605465,nssv2605518,nssv2605485,nssv2605470,nssv2605471,nssv2605481,nssv2605498,nssv2605472,nssv2605490,nssv2605484,nssv2605491,nssv2605478,nssv2605504 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945316 1 222199989 222263149 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819192,nssv1818223,nssv1819186,nssv1818242,nssv1818192,nssv1818216,nssv1818183,nssv1818208,nssv1818187,nssv1818228,nssv1818185,nssv1818247,nssv1818202,nssv1818182,nssv1819185,nssv1818231,nssv1819187,nssv1819182,nssv1818188,nssv1819202,nssv1818201,nssv1818214,nssv1818198,nssv1818225,nssv1819190,nssv1818220,nssv1819189,nssv1819201,nssv1819183,nssv1818241,nssv1818184,nssv1818219,nssv1818190,nssv1818232,nssv1818203,nssv1818248,nssv1818213,nssv1818250,nssv1818194,nssv1818218,nssv1818200,nssv1818237,nssv1818199,nssv1818244,nssv1818211,nssv1818222,nssv1818189,nssv1818212,nssv1819184,nssv1818254,nssv1818186,nssv1818221,nssv1818191,nssv1818235,nssv1818195,nssv1818227,nssv1818204,nssv1818251,nssv1819191,nssv1818217,nssv1818197,nssv1819198,nssv1818210,nssv1818243,nssv1818206,nssv1819197,nssv1819188,nssv1818239,nssv1818193,nssv1818252,nssv1818196,nssv1818207,nssv1819195,nssv1819193,nssv1818255,nssv1819181,nssv1818236,nssv1818246,nssv1818215,nssv1818234,nssv1818238,nssv1818229,nssv1819199,nssv1818233,nssv1818230,nssv1818249,nssv1818226,nssv1818240,nssv1819194,nssv1818209,nssv1818205,nssv1819196,nssv1819180,nssv1818253,nssv1818224,nssv1818245,nssv1819200 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv827n54 1 222250222 222270541 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549247,nsv549245,nsv549246,nsv549244 M 17421 13 0 "" dgv828n54 1 222250222 222283445 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549248,nsv549249 M 17421 8 0 "" esv2457419 1 222250899 222268596 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5359724 M 1 1 0 "" NA18507 dgv288e59 1 222265852 222271050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3350171,esv3393344 M 185 2 0 "" NA12891,NA19238 nsv821379 1 222265979 222271108 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420980 M 1 1 0 "" NA10851 esv27353 1 222265979 222307937 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11310,esv16231 M 40 1 9 "" NA12287,NA12489,NA12776,NA12828,NA18508,NA18907,NA18909,NA18916,NA19129,NA19147 nsv511735 1 222266476 222268388 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626380 M 1 0 1 "" 1 esv6246 1 222267589 222270400 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28687 M 1 0 0 "" dgv829n54 1 222268448 222270541 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549251,nsv549250 M 17421 3 0 "" dgv830n54 1 222268448 222283380 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549252,nsv549256 M 17421 7 0 "" dgv831n54 1 222268550 222270309 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549253,nsv549254 M 17421 0 2 "" nsv549255 1 222268550 222270541 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737338,nssv737337,nssv737336,nssv737335,nssv737340,nssv737339 M 17421 2 4 "" dgv832n54 1 222268836 222270541 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549258,nsv549257 M 17421 0 2 "" dgv833n54 1 222269391 222270541 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549260,nsv549259 M 17421 0 14 "" nsv832692 1 222273159 222474340 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441683 M 95 1 0 DEGS1,FBXO28 nsv945318 1 222273498 222277278 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819210,nssv1819235,nssv1819212,nssv1819222,nssv1819209,nssv2605619,nssv1819205,nssv2605621,nssv1819232,nssv2605617,nssv2605622,nssv1819203,nssv2605614,nssv1819206,nssv1819207,nssv2605620,nssv1819211,nssv2605607,nssv2605602,nssv1819230,nssv1819239,nssv2605603,nssv2605624,nssv1819237,nssv1819246,nssv2605606,nssv2605610,nssv1819249,nssv1819233,nssv2605608,nssv1819217,nssv2605609,nssv2605618,nssv1819227,nssv1819236,nssv1819231,nssv1819244,nssv1819241,nssv1819220,nssv2605604,nssv1819218,nssv2605623,nssv1819224,nssv1819223,nssv2605616,nssv1819204,nssv1819234,nssv1819229,nssv1819219,nssv1819243,nssv1819208,nssv1819240,nssv1819250,nssv1819226,nssv1819215,nssv1819238,nssv1819216,nssv1819228,nssv1819247,nssv1819221,nssv2605605,nssv2605613,nssv1819245,nssv1819213,nssv1819225,nssv1819248,nssv2605615,nssv1819214,nssv2605611,nssv2605612,nssv1819242 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945319 1 222287149 222288001 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819252,nssv1819281,nssv1819324,nssv1819285,nssv1819280,nssv1819308,nssv1819326,nssv1819302,nssv1819256,nssv1819292,nssv1819258,nssv1819295,nssv1819325,nssv1819276,nssv1819266,nssv1819314,nssv1819265,nssv1819251,nssv1819321,nssv1819277,nssv1819329,nssv1819300,nssv1819330,nssv1819309,nssv1819270,nssv1819303,nssv1819257,nssv1819316,nssv1819267,nssv1819318,nssv1819327,nssv1819319,nssv1819254,nssv1819278,nssv1819272,nssv1819293,nssv1819262,nssv1819301,nssv1819259,nssv1819311,nssv1819261,nssv1819287,nssv1819260,nssv1819297,nssv1819269,nssv1819274,nssv1819323,nssv1819313,nssv1819268,nssv1819310,nssv1819263,nssv1819288,nssv1819271,nssv1819307,nssv1819328,nssv1819289,nssv1819253,nssv1819304,nssv1819322,nssv1819294,nssv1819255,nssv1819299,nssv1819282,nssv1819320,nssv1819273,nssv1819317,nssv1819279,nssv1819298,nssv1819264,nssv1819306,nssv1819275,nssv1819296,nssv1819290,nssv1819305,nssv1819283,nssv1819284,nssv1819291,nssv1819315,nssv1819286,nssv1819312 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945320 1 222290439 222294674 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1819341,nssv1819387,nssv1819407,nssv1819364,nssv1819404,nssv1819375,nssv1819339,nssv1819392,nssv1819338,nssv1819385,nssv1819336,nssv1819366,nssv1819344,nssv1819382,nssv1819346,nssv1819365,nssv1819405,nssv1819398,nssv1819410,nssv1819354,nssv1819403,nssv1819388,nssv1819362,nssv1819356,nssv1819409,nssv1819357,nssv1819350,nssv1819331,nssv1819334,nssv1819372,nssv1819332,nssv1819380,nssv1819345,nssv1819389,nssv1819343,nssv1819363,nssv1819342,nssv1819378,nssv1819408,nssv1819361,nssv1819402,nssv1819394,nssv1819340,nssv1819399,nssv1819349,nssv1819383,nssv1819360,nssv1819367,nssv1819352,nssv1819396,nssv1819348,nssv1819377,nssv1819351,nssv1819381,nssv1819401,nssv1819391,nssv1819335,nssv1819373,nssv1819353,nssv1819374,nssv1819406,nssv1819369,nssv1819359,nssv1819386,nssv1819347,nssv1819379,nssv1819333,nssv1819390,nssv1819337,nssv1819368,nssv1819355,nssv1819400,nssv1819376,nssv1819393,nssv1819384,nssv1819395,nssv1819371,nssv1819358,nssv1819370,nssv1819397 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3371162 1 222308076 222308087 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903172,essv8903196,essv8903220,essv8903188,essv8903216,essv8903183,essv8903190,essv8903201,essv8903212,essv8903221,essv8903203,essv8903192,essv8903175,essv8903222,essv8903214,essv8903209,essv8903219,essv8903178,essv8903193,essv8903176,essv8903186,essv8903199,essv8903210,essv8903165,essv8903185,essv8903198,essv8903182,essv8903207,essv8903166,essv8903181,essv8903205,essv8903170,essv8903204,essv8903197,essv8903184,essv8903171,essv8903167,essv8903173,essv8903177,essv8903208,essv8903179,essv8903164,essv8903218,essv8903200,essv8903211,essv8903187,essv8903174,essv8903189,essv8903217,essv8903215,essv8903195,essv8903206,essv8903168,essv8903194 M 185 54 0 "" NA07000,NA07037,NA07357,NA11881,NA11920,NA11931,NA11992,NA11993,NA12144,NA12414,NA12489,NA12716,NA12717,NA12763,NA18502,NA18505,NA18511,NA18516,NA18517,NA18519,NA18522,NA18532,NA18537,NA18542,NA18558,NA18562,NA18564,NA18570,NA18571,NA18576,NA18592,NA18593,NA18609,NA18638,NA18858,NA18861,NA18871,NA18907,NA18916,NA18942,NA18944,NA18945,NA18947,NA18965,NA18973,NA18980,NA19005,NA19093,NA19099,NA19102,NA19114,NA19129,NA19138,NA19172 nsv511736 1 222311932 222314677 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626381 M 1 0 1 "" 1 esv2434057 1 222313095 222314953 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5347557 M 1 0 1 "" NA18507 esv5612 1 222313515 222314418 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28053 M 1 0 0 "" esv1983369 1 222313532 222314351 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4952108 M 1 0 1 "" NA18507 esv4353 1 222313691 222314299 CNV loss Wang_et_al_2008 18987735 Sequencing essv26794 M 1 0 1 "" YH esv2444088 1 222313737 222314212 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5290476 M 1 0 1 "" NA18507 esv1449207 1 222313740 222314216 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3983295 M 2 0 1 "" HuRef nsv160722 1 222320437 222320754 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179300 M 24 "" nsv8846 1 222329336 222331588 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv22420,nssv22419,nssv22421,nssv27166,nssv20098,nssv24568,nssv25438,nssv27401,nssv22416 M 31 9 0 "" NA07029,NA10863,NA11830,NA12740,NA12802,NA12872,NA18517,NA19144,NA19173 nsv8857 1 222426566 222449646 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28253 M 31 1 0 DEGS1 NA18972 nsv478999 1 222445028 222445028 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014664 M 9 0 0 DEGS1 nsv8868 1 222449646 222819154 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv20428 M 31 0 1 CNIH4,MIR320B2,MIR4742,NVL,WDR26 NA19144 esv7156 1 222459247 222460023 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29597 M 1 0 0 "" esv2083847 1 222459266 222459957 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4675526 M 1 0 1 "" NA18507 esv3940 1 222459417 222459859 CNV loss Wang_et_al_2008 18987735 Sequencing essv26381 M 1 0 1 "" YH esv1008773 1 222459447 222459759 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572921 M 3 0 1 "" HuRef esv1385887 1 222459457 222459770 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3672426 M 2 0 1 "" HuRef nsv161004 1 222459458 222459770 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179582 M 24 "" nsv469889 1 222506977 222700997 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1674597 M 265 1 0 CNIH4,MIR320B2,MIR4742,NVL,WDR26 esv2328653 1 222531079 222531495 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4753931 M 1 0 1 NVL NA18507 nsv945322 1 222551119 222553488 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820460,nssv1819457,nssv1820458,nssv1819474,nssv1820414,nssv1820451,nssv1820459,nssv1820447,nssv1819487,nssv1820452,nssv1820423,nssv1819448,nssv1819476,nssv1819444,nssv1819475,nssv1820448,nssv1820415,nssv1820446,nssv1820433,nssv1819462,nssv1820413,nssv1820453,nssv1820424,nssv1819456,nssv1820418,nssv1819459,nssv1820442,nssv1819450,nssv1820455,nssv1819455,nssv1820428,nssv1820444,nssv1820441,nssv1819458,nssv1819483,nssv1820450,nssv1820454,nssv1819451,nssv1820462,nssv1819461,nssv1820461,nssv1819445,nssv1820457,nssv1819452,nssv1819469,nssv1819464,nssv1819443,nssv1819460,nssv1819477,nssv1819446,nssv1820426,nssv1819463,nssv1819466,nssv1820445,nssv1819478,nssv1820449,nssv1820434,nssv1819454,nssv1819470,nssv1819449,nssv1820425,nssv1819472,nssv1819468,nssv1819465,nssv1820416,nssv1819447,nssv1820443,nssv1819471,nssv1820463,nssv1819467,nssv1820438,nssv1819453,nssv1820435,nssv1820456,nssv1820436,nssv1819473,nssv1820430,nssv1820439,nssv1819485,nssv1819484,nssv1820417,nssv1820427,nssv1820432,nssv1820431,nssv1820422,nssv1820421,nssv1819479,nssv1820420,nssv1820419,nssv1819482,nssv1820437,nssv1819486,nssv1819480,nssv1820429,nssv1820412,nssv1820440,nssv1819481 M 97 10 0 NVL HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2508330 1 222632264 222633738 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5167159 M 1 0 1 CNIH4 NA18507 nsv508062 1 222642817 222648817 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624232 M 4 0 0 WDR26 NA18994 nsv160255 1 222646692 222655996 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178833 M 24 MIR4742,WDR26 nsv475735 1 222678801 222678801 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011227 M 9 1 0 WDR26 NA12878 esv2520695 1 222804777 222807690 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5249082 M 1 0 1 "" NA18507 nsv945324 1 222829035 222830272 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820488,nssv1820506,nssv1820486,nssv1819085,nssv1820468,nssv1819083,nssv1820470,nssv1819096,nssv1820475,nssv1819117,nssv1819104,nssv1820496,nssv1820478,nssv1819101,nssv1820484,nssv1820500,nssv1820476,nssv1820501,nssv1819105,nssv1820509,nssv1820469,nssv1820503,nssv1819111,nssv1820490,nssv1819103,nssv1820518,nssv1820466,nssv1820512,nssv1820483,nssv1820502,nssv1820480,nssv1820507,nssv1820465,nssv1820516,nssv1819102,nssv1819090,nssv1820471,nssv1819097,nssv1820485,nssv1820511,nssv1819109,nssv1819116,nssv1820493,nssv1819093,nssv1820472,nssv1819088,nssv1820482,nssv1819098,nssv1820473,nssv1820519,nssv1819110,nssv1819095,nssv1819106,nssv1820515,nssv1820481,nssv1819100,nssv1820477,nssv1819114,nssv1820474,nssv1819087,nssv1819108,nssv1820487,nssv1820479,nssv1820494,nssv1820495,nssv1820498,nssv1819107,nssv1819118,nssv1820467,nssv1820517,nssv1820492,nssv1819094,nssv1819121,nssv1820499,nssv1819082,nssv1819091,nssv1819092,nssv1820513,nssv1819113,nssv1819089,nssv1820464,nssv1819084,nssv1819115,nssv1820510,nssv1820489,nssv1820508,nssv1819081,nssv1820504,nssv1820497,nssv1819099,nssv1819086,nssv1819112,nssv1819119,nssv1820505,nssv1819120,nssv1820491,nssv1820514 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3445673 1 222843207 222843226 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598369 M 185 1 0 "" NA11918 esv3304083 1 222843216 222843217 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7790499,essv7781892,essv7777239,essv7792407,essv7823694,essv7796935,essv7789755,essv7835943,essv7770448,essv7799823,essv7812646,essv7829065,essv7774890,essv7779340,essv7807034,essv7832600,essv7771731,essv7786571,essv7826796,essv7791476,essv7792808,essv7831054,essv7792073,essv7796440,essv7812278,essv7805605,essv7780420,essv7825273,essv7817416,essv7815793,essv7808157,essv7818120,essv7777086,essv7830139,essv7777896,essv7832161,essv7816087,essv7786409,essv7810733 M 185 39 0 "" NA07000,NA11918,NA18498,NA18499,NA18501,NA18502,NA18517,NA18519,NA18523,NA18537,NA18563,NA18566,NA18579,NA18582,NA18593,NA18605,NA18870,NA18907,NA18909,NA18912,NA18916,NA18940,NA18942,NA18945,NA18949,NA18951,NA18959,NA18965,NA18973,NA18980,NA19102,NA19108,NA19114,NA19116,NA19138,NA19147,NA19190,NA19239,NA19257 esv3370377 1 222843217 222843229 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903262,essv8903227,essv8903260,essv8903261,essv8903233,essv8903264,essv8903255,essv8903253,essv8903254,essv8903231,essv8903258,essv8903223,essv8903236,essv8903232,essv8903247,essv8903245,essv8903246,essv8903235,essv8903250,essv8903228,essv8903256,essv8903240,essv8903265,essv8903244,essv8903263,essv8903229,essv8903234,essv8903241,essv8903266,essv8903251,essv8903243,essv8903257,essv8903239,essv8903249,essv8903252,essv8903238,essv8903230,essv8903242 M 185 38 0 "" NA07000,NA11918,NA18498,NA18499,NA18501,NA18502,NA18517,NA18519,NA18523,NA18537,NA18563,NA18566,NA18579,NA18582,NA18593,NA18605,NA18870,NA18907,NA18909,NA18912,NA18916,NA18940,NA18942,NA18945,NA18949,NA18951,NA18959,NA18965,NA18973,NA18980,NA19102,NA19108,NA19114,NA19116,NA19138,NA19147,NA19190,NA19257 esv3370039 1 222843223 222843236 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673924 M 185 1 0 "" NA19239 esv3309736 1 222843226 222843227 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836829,essv7838910 M 185 2 0 "" NA19238,NA19239 dgv102n67 1 222882273 222884928 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826820,nsv826831 M 31 0 3 CNIH3 NA18552,NA18582,NA18969 esv26044 1 222926825 222927900 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21093 M 40 0 2 CNIH3 NA12004,NA18517 nsv549261 1 222927143 222927825 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737359 M 17421 0 1 CNIH3 nsv474794 1 222955361 222955361 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013046 M 9 1 0 CNIH3 NA19240 nsv524125 1 222968677 223088483 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700003 M 2026 1 0 CNIH3 esv24936 1 222969324 222969927 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv9894 M 40 1 0 CNIH3 NA18909 esv2023755 1 223005169 223005622 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4634849 M 1 0 1 "" NA18507 esv3875 1 223005256 223005503 CNV loss Wang_et_al_2008 18987735 Sequencing essv26316 M 1 0 1 "" YH esv29331 1 223060217 223063223 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10566 M 40 0 3 "" NA18517,NA18861,NA19257 nsv527809 1 223112451 223115370 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704303 M 2026 0 1 "" nsv476145 1 223129882 223129882 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015929 M 9 1 0 "" NA12878 esv27952 1 223142151 223147714 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16888 M 40 0 1 "" NA18508 esv2759001 1 223154547 223319897 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757773 M 270 1 0 DNAH14 NA06985 nsv1005824 1 223181277 223225494 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501774 M 29084 0 1 DNAH14 dgv834n54 1 223258475 223386521 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549263,nsv549262 M 17421 0 2 DNAH14 nsv1004856 1 223294910 223337760 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489224 M 29084 0 1 DNAH14 nsv526708 1 223296489 223339871 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703047 M 2026 0 1 DNAH14 esv2607015 1 223322773 223324385 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282753 M 1 0 1 DNAH14 NA18507 esv2297381 1 223322970 223323627 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4606522 M 1 0 1 DNAH14 NA18507 esv7171 1 223323058 223323577 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29612 M 1 0 0 DNAH14 esv4999 1 223323096 223323501 CNV loss Wang_et_al_2008 18987735 Sequencing essv27440 M 1 0 1 DNAH14 YH esv2511976 1 223323155 223323424 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5186849 M 1 0 1 DNAH14 NA18507 esv1621884 1 223323168 223323438 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4165386 M 2 0 1 DNAH14 HuRef esv1092506 1 223333129 223333183 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4013952 M 2 0 1 DNAH14 HuRef nsv524461 1 223370954 223414312 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700395 M 2026 1 0 DNAH14 nsv549264 1 223371594 223542648 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737362 M 17421 0 1 DNAH14 nsv524233 1 223406864 223414312 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700123 M 2026 0 1 DNAH14 esv2566088 1 223410409 223411840 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5207134 M 1 0 1 DNAH14 NA18507 esv2367547 1 223410832 223411523 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4519200 M 1 0 1 DNAH14 NA18507 esv996698 1 223411024 223411337 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574091 M 3 0 1 DNAH14 HuRef esv2552398 1 223411032 223411345 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5228729 M 1 0 1 DNAH14 NA18507 nsv832703 1 223442576 223586839 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441684 M 95 1 0 DNAH14 dgv579n100 1 223456113 223538306 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002430,nsv1005481,nsv997904,nsv1014968 M 29084 6 0 DNAH14 esv2762171 1 223457556 223530395 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005756 M 1109 1 0 DNAH14 SW_1435 esv3378167 1 223460204 223460224 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903268,essv8903267 M 185 2 0 DNAH14 NA12004,NA12043 esv3303827 1 223460209 223460210 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7762114,essv7750759 M 185 2 0 DNAH14 NA12004,NA12043 nsv549265 1 223462582 223528969 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737363 M 17421 1 0 DNAH14 esv2759002 1 223471574 223593401 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757774 M 270 69 0 DNAH14 NA07000,NA07034,NA07048,NA10831,NA10838,NA11882,NA12003,NA12005,NA12234,NA12249,NA12264,NA12707,NA12750,NA12762,NA12763,NA12814,NA12872,NA12874,NA18504,NA18523,NA18529,NA18532,NA18537,NA18563,NA18566,NA18573,NA18577,NA18603,NA18609,NA18611,NA18612,NA18620,NA18859,NA18862,NA18912,NA18944,NA18945,NA18951,NA18952,NA18960,NA18961,NA18964,NA18966,NA18967,NA18971,NA18974,NA18976,NA18981,NA18990,NA19127,NA19129,NA19130,NA19137,NA19138,NA19141,NA19145,NA19153,NA19154,NA19159,NA19161,NA19171,NA19172,NA19194,NA19202,NA19204,NA19206,NA19210,NA19211,NA19238 nsv428312 1 223471574 223593401 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv453008,nssv452997 M 62 2 0 DNAH14 HGDP00984,NA19108 nsv521527 1 223530395 223532767 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698144 M 2026 0 1 DNAH14 nsv549266 1 223562279 223575335 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737364 M 17421 0 1 DNAH14 esv3379033 1 223582070 223582084 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863824,essv7863823 M 185 2 0 DNAH14 NA11992,NA18871 esv1357490 1 223589680 223589680 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4104530 M 2 1 0 DNAH14 HuRef esv1332453 1 223590161 223590161 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3997184 M 2 1 0 DNAH14 HuRef esv3331433 1 223627246 223627265 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598380 M 185 1 0 DNAH14 NA07346 nsv832714 1 223658956 223872019 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441686 M 95 0 1 ENAH,LBR nsv1004851 1 223680763 223750807 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489217 M 29084 1 0 ENAH,LBR esv34905 1 223698027 223743205 CNV gain Pinto_et_al_2007 17911159 SNP array essv6990403,essv6979748 M 771 2 0 ENAH NA18621 nsv8880 1 223723031 223754333 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25458,nssv26861 M 31 2 0 ENAH NA18564,NA18942 nsv826842 1 223724685 223753209 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440175 M 31 1 0 ENAH NA18564 nsv441740 1 223725840 223750819 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656899,nssv1656900,nssv1656901,nssv1656902 M 270 4 0 ENAH NA18555,NA18564,NA18621,NA18635 nsv4709 1 223731617 223734100 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1726 M 9 1 0 "" NA18555 nsv433350 1 223731907 223752648 CNV gain Cooper_et_al_2008 18776910 SNP array nssv463231 M 9 1 0 ENAH NA18555 esv2759003 1 223732317 223770108 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756886 M 270 4 0 ENAH NA18555,NA18564,NA18621,NA18635 nsv4720 1 223739841 223784632 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8149 M 9 0 1 ENAH NA12156 nsv826853 1 223739859 223740572 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434222,nssv1438051,nssv1437268,nssv1431128,nssv1435518,nssv1439508,nssv1428072,nssv1428869,nssv1429610,nssv1440176,nssv1433471,nssv1437989,nssv1440867 M 31 13 0 "" AK10,AK12,AK14,AK18,NA18526,NA18537,NA18547,NA18564,NA18570,NA18592,NA18949,NA18951,NA18969 nsv821259 1 223740078 223740572 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420991 M 1 0 1 "" NA10851 nsv826864 1 223740078 223740572 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436389,nssv1427306,nssv1434906 M 31 3 0 "" AK8,NA18542,NA18942 nsv4731 1 223746768 223748078 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1735 M 9 1 0 ENAH NA18555 nsv945325 1 223748903 223751139 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820129,nssv1819148,nssv1820126,nssv1819122,nssv1819137,nssv1819152,nssv1820123,nssv1820140,nssv1819127,nssv1820133,nssv1819136,nssv1820105,nssv1819124,nssv1819174,nssv1820127,nssv1820141,nssv1820130,nssv1819171,nssv1819141,nssv1820122,nssv1820125,nssv1820109,nssv1820132,nssv1820142,nssv1819138,nssv1820117,nssv1819125,nssv1820116,nssv1819151,nssv1820113,nssv1820128,nssv1819172,nssv1819129,nssv1819168,nssv1819130,nssv1820114,nssv1819142,nssv1820119,nssv1819134,nssv1819158,nssv1819123,nssv1820111,nssv1819132,nssv1820118,nssv1819140,nssv1820106,nssv1819143,nssv1819175,nssv1819139,nssv1819164,nssv1819126,nssv1819177,nssv1819144,nssv1820108,nssv1819131,nssv1820135,nssv1820131,nssv1820137,nssv1819153,nssv1819159,nssv1819133,nssv1820138,nssv1819150,nssv1819161,nssv1820124,nssv1819170,nssv1819128,nssv1819179,nssv1819146,nssv1820110,nssv1819135,nssv1819160,nssv1819149,nssv1820115,nssv1820136,nssv1819163,nssv1819145,nssv1819165,nssv1819167,nssv1819169,nssv1820121,nssv1819154,nssv1820104,nssv1819173,nssv1819147,nssv1819155,nssv1819157,nssv1819162,nssv1819176,nssv1819166,nssv1820107,nssv1820134,nssv1820139,nssv1820120,nssv1820112,nssv1819156,nssv1819178 M 97 10 0 ENAH HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832725 1 223793621 223976744 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441687 M 95 1 0 ENAH nsv511737 1 223826556 223829694 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626382 M 1 0 1 ENAH 1 esv2621711 1 223828176 223829723 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5269397 M 1 0 1 ENAH NA18507 esv1963994 1 223828768 223829440 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4939628 M 1 0 1 ENAH NA18507 esv7564 1 223828869 223829505 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30005 M 1 0 0 ENAH esv4193 1 223828886 223829340 CNV loss Wang_et_al_2008 18987735 Sequencing essv26634 M 1 0 1 ENAH YH esv1034120 1 223828944 223829262 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3928300 M 2 0 1 ENAH HuRef nsv832736 1 223882340 224035242 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441688 M 95 0 1 ENAH,SRP9 esv3416722 1 223961052 223963150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692132 M 185 1 0 "" NA19239 nsv160519 1 223971795 223971795 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179097 M 24 "" nsv525391 1 223979243 223995161 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701514 M 2026 1 0 "" nsv524126 1 224040400 224277276 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700004 M 2026 1 0 EPHX1,LEFTY1,LEFTY2,MIR6741,PYCR2,SDE2,SRP9,TMEM63A nsv945326 1 224043668 224045087 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820145,nssv1820144,nssv1820152,nssv1820147,nssv1820150,nssv1820151,nssv1820149,nssv1820146,nssv1820148,nssv1820143,nssv1820153 M 97 10 0 SRP9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1483803 1 224059167 224059227 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3818631 M 2 0 1 "" HuRef esv3305796 1 224063043 224063044 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7776829,essv7809593,essv7810513,essv7802321,essv7781628,essv7804666,essv7799607,essv7776398,essv7830959,essv7802985,essv7779244,essv7835040,essv7777882,essv7805142,essv7836218,essv7802006,essv7829064,essv7788457,essv7810786,essv7772471,essv7786742,essv7808823,essv7796591,essv7813448,essv7831656,essv7787560,essv7830757,essv7785294,essv7814374,essv7800237,essv7783240,essv7819199,essv7816813,essv7827790,essv7823769,essv7793971,essv7770256,essv7828755,essv7815598,essv7833702,essv7782793,essv7803537,essv7792645,essv7807956,essv7780007,essv7787133,essv7791822,essv7826656,essv7790405,essv7820291,essv7796110,essv7775832,essv7821707,essv7772814,essv7798018,essv7780475,essv7819477,essv7794582,essv7817720,essv7822341,essv7771042,essv7813536 M 185 62 0 "" NA06986,NA07037,NA07051,NA07346,NA07347,NA07357,NA10847,NA10851,NA11831,NA11840,NA11881,NA11993,NA12043,NA12045,NA12144,NA12155,NA12234,NA12249,NA12287,NA12414,NA12716,NA12750,NA12812,NA12814,NA12828,NA12873,NA12874,NA12878,NA12891,NA18519,NA18545,NA18550,NA18555,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18579,NA18582,NA18593,NA18603,NA18605,NA18638,NA18940,NA18945,NA18949,NA18951,NA18952,NA18956,NA18959,NA18961,NA18964,NA18965,NA18973,NA18980,NA19114,NA19239,NA19240 esv3309624 1 224063045 224063046 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840173,essv7841998,essv7840477,essv7843211 M 185 4 0 "" NA12878,NA12891,NA19239,NA19240 esv7173 1 224069285 224069974 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29614 M 1 0 0 EPHX1 nsv159413 1 224073389 224073567 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177991 M 24 EPHX1 esv1580917 1 224073401 224073580 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3587848 M 2 0 1 EPHX1 HuRef esv2762223 1 224091798 224268339 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006999 M 1109 1 0 EPHX1,LEFTY1,LEFTY2,MIR6741,PYCR2,SDE2,TMEM63A RW_0549 nsv520628 1 224093029 224159985 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694659,nssv674868,nssv697156,nssv685769,nssv673330 M 2026 0 5 EPHX1,LEFTY1,TMEM63A nsv160017 1 224124005 224127026 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178595 M 24 TMEM63A nsv549267 1 224145538 224201755 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737365 M 17421 0 1 LEFTY2,MIR6741,PYCR2 nsv945329 1 224191469 224192111 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820267,nssv1820238,nssv1820272,nssv1820254,nssv1820195,nssv1820211,nssv1820208,nssv1820263,nssv1820194,nssv1820276,nssv1820271,nssv1820239,nssv1820217,nssv1820262,nssv1820191,nssv1820283,nssv1820273,nssv1820245,nssv1820201,nssv1820282,nssv1820193,nssv1820275,nssv1820265,nssv1820247,nssv1820200,nssv1820234,nssv1820207,nssv1820214,nssv1820274,nssv1820213,nssv1820190,nssv1820256,nssv1820189,nssv1820278,nssv1820199,nssv1820218,nssv1820192,nssv1820237,nssv1820202,nssv1820284,nssv1820270,nssv1820244,nssv1820196,nssv1820222,nssv1820212,nssv1820264,nssv1820206,nssv1820221,nssv1820198,nssv1820240,nssv1820203,nssv1820223,nssv1820205,nssv1820281,nssv1820268,nssv1820255,nssv1820204,nssv1820188,nssv1820266,nssv1820252,nssv1820209,nssv1820248,nssv1820219,nssv1820215,nssv1820269,nssv1820251,nssv1820197,nssv1820260,nssv1820210,nssv1820225,nssv1820216,nssv1820259,nssv1820224,nssv1820220,nssv1820253,nssv1820250,nssv1820229,nssv1820277,nssv1820228,nssv1820258,nssv1820261,nssv1820279,nssv1820230,nssv1820236,nssv1820243,nssv1820235,nssv1820249,nssv1820241,nssv1820280,nssv1820257,nssv1820246,nssv1820233,nssv1820227,nssv1820232,nssv1820242,nssv1820226,nssv1820231 M 97 10 0 LEFTY2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3414693 1 224202794 224202794 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740950 M 185 1 0 "" NA19240 esv1480815 1 224218889 224218889 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3812865 M 2 1 0 "" HuRef nsv832747 1 224260766 224440038 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441689 M 95 1 0 ACBD3,H3F3A,H3F3AP4 dgv103n67 1 224264326 224266883 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826886,nsv826875 M 31 0 2 "" NA18949,NA18997 nsv523155 1 224301506 224306453 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698864 M 2026 0 1 "" nsv524575 1 224301506 224309395 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700531 M 2026 0 1 "" nsv945330 1 224325695 224326507 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820298,nssv1820327,nssv1820305,nssv1820321,nssv1820288,nssv1820317,nssv1820369,nssv1820308,nssv1820294,nssv1820310,nssv1820363,nssv1820377,nssv1820365,nssv1820381,nssv1820292,nssv1820322,nssv1820368,nssv1820351,nssv1820314,nssv1820373,nssv1820290,nssv1820346,nssv1820306,nssv1820360,nssv1820366,nssv1820336,nssv1820299,nssv1820342,nssv1820304,nssv1820344,nssv1820301,nssv1820359,nssv1820309,nssv1820372,nssv1820295,nssv1820379,nssv1820300,nssv1820341,nssv1820287,nssv1820315,nssv1820296,nssv1820320,nssv1820291,nssv1820380,nssv1820293,nssv1820331,nssv1820370,nssv1820311,nssv1820303,nssv1820334,nssv1820286,nssv1820361,nssv1820362,nssv1820339,nssv1820302,nssv1820340,nssv1820307,nssv1820337,nssv1820289,nssv1820353,nssv1820297,nssv1820333,nssv1820316,nssv1820318,nssv1820371,nssv1820348,nssv1820364,nssv1820319,nssv1820313,nssv1820312,nssv1820367,nssv1820350,nssv1820356,nssv1820285,nssv1820357,nssv1820345,nssv1820335,nssv1820352,nssv1820358,nssv1820349,nssv1820374,nssv1820328,nssv1820378,nssv1820355,nssv1820338,nssv1820325,nssv1820323,nssv1820347,nssv1820324,nssv1820329,nssv1820326,nssv1820332,nssv1820343,nssv1820354,nssv1820330,nssv1820375,nssv1820376 M 97 10 0 H3F3A,H3F3AP4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv475022 1 224346131 224346131 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013462 M 9 1 0 "" NA18956 nsv473355 1 224354855 224354855 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011188 M 9 1 0 "" NA19129 nsv832759 1 224370383 224570793 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441690 M 95 0 1 ACBD3,LIN9,MIXL1 nsv819122 1 224413180 224417019 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419580 M 2 0 1 ACBD3 AK1 nsv826897 1 224424172 224427106 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1435629 M 31 0 1 ACBD3 NA18592 esv2591433 1 224439462 224439470 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5227147 M 1 1 0 ACBD3 NA18507 nsv945331 1 224441001 224444137 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820406,nssv1821349,nssv1820396,nssv1821354,nssv1820386,nssv1820405,nssv1820397,nssv1821370,nssv1820402,nssv1821356,nssv1820392,nssv1821396,nssv1820390,nssv1821338,nssv1820404,nssv1821397,nssv1820387,nssv1821352,nssv1820389,nssv1821346,nssv1821386,nssv1821341,nssv1821383,nssv1821374,nssv1820401,nssv1821379,nssv1821390,nssv1821339,nssv1821391,nssv1821336,nssv1821387,nssv1821359,nssv1820398,nssv1821355,nssv1821392,nssv1821351,nssv1821385,nssv1821347,nssv1820391,nssv1821399,nssv1820393,nssv1821353,nssv1820384,nssv1821398,nssv1821388,nssv1821348,nssv1820385,nssv1821345,nssv1820395,nssv1821394,nssv1820400,nssv1821340,nssv1820411,nssv1821367,nssv1821389,nssv1820408,nssv1820399,nssv1821372,nssv1820383,nssv1821380,nssv1820394,nssv1821400,nssv1820403,nssv1821343,nssv1821384,nssv1821402,nssv1820388,nssv1821358,nssv1821337,nssv1821382,nssv1820410,nssv1821393,nssv1821363,nssv1820407,nssv1821381,nssv1821344,nssv1821364,nssv1821401,nssv1820382,nssv1821360,nssv1821373,nssv1821342,nssv1820409,nssv1821366,nssv1821395,nssv1821377,nssv1821378,nssv1821357,nssv1821369,nssv1821350,nssv1821376,nssv1821375,nssv1821362,nssv1821368,nssv1821361,nssv1821371,nssv1821365 M 97 10 0 ACBD3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv517107 1 224441890 224575268 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv653609,nssv700478,nssv674845,nssv705787,nssv669419,nssv661530,nssv668445,nssv660071,nssv676350,nssv665773,nssv692442,nssv689961,nssv656909,nssv670703,nssv679636,nssv655350,nssv670771 M 2026 14 3 LIN9,MIXL1 esv28762 1 224442473 224450631 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20384 M 40 0 1 "" NA12004 esv3891148 1 224490195 224561138 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25786066 M 3017 0 1 LIN9 nsv832770 1 224531753 224722135 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441691 M 95 0 1 LIN9,PARP1 nsv4744 1 224575921 224609381 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8156 M 9 1 0 "" NA12156 esv2085714 1 224610449 224610883 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4789956 M 1 0 1 "" NA18507 nsv527874 1 224624501 224629402 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704373 M 2026 0 1 PARP1 nsv832781 1 224637524 224817320 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441692 M 95 1 0 C1orf95,PARP1 nsv523247 1 224688401 224692900 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698976 M 2026 0 1 "" nsv945332 1 224691246 224693682 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821434,nssv1820836,nssv1821407,nssv1820871,nssv1821424,nssv1820850,nssv1821432,nssv1821445,nssv1821427,nssv1820840,nssv1820859,nssv1821449,nssv1821411,nssv1820838,nssv1820862,nssv1820852,nssv1820864,nssv1821430,nssv1821417,nssv1821446,nssv1820866,nssv1821435,nssv1821425,nssv1820858,nssv1821418,nssv1820872,nssv1821408,nssv1820842,nssv1821415,nssv1820851,nssv1821423,nssv1821433,nssv1821416,nssv1820845,nssv1820863,nssv1821438,nssv1821409,nssv1821436,nssv1821422,nssv1820849,nssv1821412,nssv1821448,nssv1820868,nssv1821426,nssv1820860,nssv1821444,nssv1821413,nssv1821443,nssv1820865,nssv1820831,nssv1821419,nssv1820846,nssv1820861,nssv1820873,nssv1820867,nssv1820854,nssv1821404,nssv1820832,nssv1821410,nssv1820847,nssv1821421,nssv1820855,nssv1821420,nssv1821450,nssv1821414,nssv1820844,nssv1821405,nssv1821429,nssv1821431,nssv1820833,nssv1821406,nssv1820876,nssv1820857,nssv1820835,nssv1820848,nssv1820830,nssv1820837,nssv1820843,nssv1820874,nssv1821447,nssv1821442,nssv1820875,nssv1821428,nssv1820878,nssv1821440,nssv1820870,nssv1821437,nssv1820841,nssv1820869,nssv1820856,nssv1820834,nssv1820839,nssv1821441,nssv1821403,nssv1820853,nssv1820877,nssv1821439 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945333 1 224745049 224747605 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820964,nssv1820955,nssv1820903,nssv1820952,nssv1820880,nssv1820974,nssv1820961,nssv1820939,nssv1820894,nssv1820912,nssv1820883,nssv1820975,nssv1820959,nssv1820931,nssv1820892,nssv1820915,nssv1820893,nssv1820930,nssv1820956,nssv1820933,nssv1820899,nssv1820905,nssv1820885,nssv1820950,nssv1820881,nssv1820947,nssv1820884,nssv1820937,nssv1820957,nssv1820921,nssv1820963,nssv1820914,nssv1820960,nssv1820942,nssv1820901,nssv1820949,nssv1820898,nssv1820948,nssv1820965,nssv1820923,nssv1820958,nssv1820911,nssv1820895,nssv1820934,nssv1820891,nssv1820920,nssv1820962,nssv1820944,nssv1820882,nssv1820904,nssv1820886,nssv1820929,nssv1820889,nssv1820928,nssv1820908,nssv1820919,nssv1820887,nssv1820946,nssv1820897,nssv1820879,nssv1820896,nssv1820925,nssv1820910,nssv1820970,nssv1820890,nssv1820968,nssv1820907,nssv1820969,nssv1820900,nssv1820917,nssv1820888,nssv1820918,nssv1820943,nssv1820941,nssv1820935,nssv1820971,nssv1820906,nssv1820913,nssv1820924,nssv1820951,nssv1820932,nssv1820926,nssv1820922,nssv1820953,nssv1820972,nssv1820966,nssv1820945,nssv1820938,nssv1820940,nssv1820902,nssv1820973,nssv1820967,nssv1820927,nssv1820936,nssv1820916,nssv1820954,nssv1820909 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv477811 1 224816349 224816349 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014225 M 9 1 0 C1orf95 NA18517 nsv470779 1 224845055 224899927 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544415,nssv544414 M 443 0 2 C1orf95,ITPKB HGDP00288,HGDP00825 nsv522446 1 224852153 224990561 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705805 M 2026 0 1 C1orf95,ITPKB,ITPKB-IT1 nsv4755 1 224862958 224898231 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3802 M 9 1 0 C1orf95,ITPKB NA12878 esv1105613 1 224877027 224877101 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4322232 M 2 0 1 "" HuRef esv1647637 1 224877196 224877196 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4257164 M 2 1 0 "" HuRef esv992736 1 224889563 224893769 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565601 M 3 0 1 ITPKB HuRef nsv516277 1 224891964 224899927 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv667279,nssv663808,nssv677712,nssv670946,nssv673552 M 2026 0 5 ITPKB nsv473166 1 224940227 224940227 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012599 M 9 1 0 ITPKB NA19129 nsv523759 1 224990128 224990561 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699579 M 2026 0 1 ITPKB esv2582920 1 225051123 225052935 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5323888 M 1 0 1 "" NA18507 esv989484 1 225052280 225052585 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569377 M 3 0 1 "" HuRef nsv160494 1 225052392 225052736 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179072 M 24 "" esv1018491 1 225052430 225052736 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3644759 M 2 0 1 "" HuRef esv3891159 1 225055781 225075125 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787183 M 3017 0 1 "" esv3403134 1 225065529 225065548 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598447 M 185 1 0 "" NA18970 nsv4766 1 225092577 225137584 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8162 M 9 0 1 PSEN2 NA12156 esv3309902 1 225157342 225157343 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837095,essv7838539 M 185 2 0 "" NA19238,NA19239 esv3434382 1 225157343 225157367 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673929 M 185 1 0 "" NA19239 esv3373767 1 225157360 225157377 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903328,essv8903331,essv8903329,essv8903327,essv8903332,essv8903330 M 185 6 0 "" NA18520,NA18523,NA18871,NA18907,NA19099,NA19114 esv3304398 1 225157367 225157368 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7754895,essv7753561,essv7742441,essv7741512,essv7746985,essv7750262,essv7763342 M 185 7 0 "" NA18520,NA18523,NA18871,NA18907,NA19099,NA19114,NA19239 nsv549268 1 225191283 225215826 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737366 M 17421 0 1 ADCK3 nsv520923 1 225194241 225245571 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682689,nssv700080,nssv677713 M 2026 0 3 ADCK3,CDC42BPA esv7588 1 225209564 225211604 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30029 M 1 0 0 ADCK3 esv27984 1 225209574 225211649 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18820 M 40 0 2 ADCK3 NA18511,NA18861 esv1025849 1 225209897 225209897 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4118291 M 2 1 0 ADCK3 HuRef esv1090769 1 225210349 225211383 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3616391 M 2 0 1 ADCK3 HuRef esv3450926 1 225214052 225215150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692133 M 185 1 0 ADCK3 NA19240 esv1004677 1 225230463 225230542 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3576201 M 3 0 1 ADCK3 HuRef esv1389161 1 225230484 225230564 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3801001 M 2 0 1 ADCK3 HuRef esv3339854 1 225232052 225233350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692134 M 185 1 0 ADCK3 NA19239 esv7871 1 225232735 225233217 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30312 M 1 0 0 ADCK3 esv3257 1 225232825 225233388 CNV loss Wang_et_al_2008 18987735 Sequencing essv25698 M 1 0 1 ADCK3 YH nsv1005811 1 225263125 225282590 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501757 M 29084 0 1 CDC42BPA dgv580n100 1 225263125 225313783 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007352,nsv1010864 M 29084 0 2 CDC42BPA dgv581n100 1 225263125 225338373 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014423,nsv1012482,nsv997751 M 29084 0 3 CDC42BPA nsv1011654 1 225263125 225375039 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494514 M 29084 0 1 CDC42BPA nsv832792 1 225278001 225431615 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441693 M 95 0 1 CDC42BPA nsv468227 1 225290359 225407413 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543356 M 1557 0 1 CDC42BPA NINDS_142 nsv549269 1 225290359 225407413 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174051 M 17421 0 1 CDC42BPA NINDS_142 nsv998420 1 225295214 225341654 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499034 M 29084 0 1 CDC42BPA nsv522990 1 225356762 225369535 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698660 M 2026 0 1 CDC42BPA nsv549270 1 225356762 225427695 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737368,nssv737367 M 17421 0 2 CDC42BPA esv33574 1 225416271 225420813 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98914 M 51 0 1 CDC42BPA 21606 nsv549271 1 225477626 225647640 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737369 M 17421 1 0 CDC42BPA esv3430743 1 225498337 225498354 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863825 M 185 1 0 CDC42BPA NA12005 nsv473310 1 225503650 225503650 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014934 M 9 1 0 CDC42BPA NA19129 esv22606 1 225511652 225515889 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10821 M 40 0 4 CDC42BPA NA18511,NA18517,NA18861,NA19108 nsv522490 1 225512631 225516767 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705857 M 2026 0 1 CDC42BPA esv2476939 1 225518256 225519735 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5219140 M 1 0 1 CDC42BPA NA18507 esv2261733 1 225518480 225519152 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4911506 M 1 0 1 CDC42BPA NA18507 esv3304704 1 225529554 225529555 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7784662,essv7808765,essv7820952,essv7827810,essv7795069,essv7824584,essv7814163,essv7776110,essv7804515,essv7799132,essv7780501,essv7819301,essv7815062,essv7834162,essv7775857,essv7797335,essv7771088,essv7801649,essv7817351,essv7804566,essv7794275,essv7781210,essv7815469,essv7783295,essv7803299,essv7828850,essv7826779,essv7831897,essv7824488,essv7815999,essv7806902,essv7814510,essv7819560,essv7823340,essv7818372,essv7786548,essv7770148,essv7795200,essv7822173,essv7832921,essv7809754,essv7834489,essv7770798,essv7825296,essv7789472,essv7799828,essv7778520,essv7830516,essv7782934,essv7779525,essv7774602,essv7776962,essv7807455,essv7798858,essv7792090,essv7831437,essv7798309,essv7818219,essv7810120,essv7797206,essv7828285,essv7777769,essv7792348,essv7806090,essv7825534,essv7773286,essv7835826,essv7788111,essv7791416 M 185 69 0 CDC42BPA NA07347,NA07357,NA10847,NA11992,NA11993,NA11995,NA12003,NA12154,NA12234,NA12287,NA12716,NA12776,NA12815,NA12872,NA18502,NA18507,NA18511,NA18516,NA18517,NA18519,NA18522,NA18523,NA18526,NA18537,NA18542,NA18545,NA18555,NA18558,NA18564,NA18566,NA18570,NA18572,NA18573,NA18576,NA18577,NA18579,NA18592,NA18593,NA18603,NA18608,NA18638,NA18856,NA18861,NA18870,NA18907,NA18909,NA18912,NA18940,NA18943,NA18947,NA18959,NA18960,NA18961,NA18964,NA18970,NA18973,NA18980,NA19093,NA19099,NA19108,NA19114,NA19138,NA19147,NA19172,NA19190,NA19238,NA19239,NA19240,NA19257 esv3309042 1 225529558 225529559 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836932 M 185 1 0 CDC42BPA NA19239 esv3424218 1 225529559 225529578 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598480,essv9598469,essv9598458 M 185 3 0 CDC42BPA NA07347,NA12815,NA18970 esv3330543 1 225529560 225529568 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673930,essv8673934,essv8673933 M 185 3 0 CDC42BPA NA19238,NA19239,NA19240 esv3371169 1 225529569 225529583 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903360,essv8903349,essv8903395,essv8903396,essv8903376,essv8903388,essv8903391,essv8903341,essv8903374,essv8903368,essv8903356,essv8903344,essv8903390,essv8903382,essv8903400,essv8903380,essv8903351,essv8903350,essv8903333,essv8903375,essv8903366,essv8903347,essv8903371,essv8903352,essv8903339,essv8903362,essv8903383,essv8903385,essv8903365,essv8903358,essv8903377,essv8903399,essv8903369,essv8903346,essv8903398,essv8903342,essv8903372,essv8903357,essv8903361,essv8903379,essv8903353,essv8903343,essv8903378,essv8903334,essv8903397,essv8903355,essv8903345,essv8903387,essv8903340,essv8903354,essv8903394,essv8903384,essv8903335,essv8903386,essv8903364,essv8903363,essv8903401,essv8903393,essv8903373,essv8903367,essv8903389,essv8903338 M 185 62 0 CDC42BPA NA07347,NA07357,NA10847,NA11992,NA11993,NA11995,NA12003,NA12154,NA12287,NA12716,NA12776,NA18502,NA18507,NA18511,NA18516,NA18517,NA18519,NA18522,NA18523,NA18526,NA18537,NA18542,NA18545,NA18555,NA18558,NA18564,NA18566,NA18570,NA18572,NA18573,NA18576,NA18577,NA18579,NA18592,NA18593,NA18603,NA18608,NA18638,NA18856,NA18861,NA18870,NA18907,NA18909,NA18912,NA18940,NA18943,NA18947,NA18959,NA18960,NA18961,NA18964,NA18973,NA18980,NA19093,NA19099,NA19108,NA19114,NA19138,NA19147,NA19172,NA19190,NA19257 nsv508063 1 225546801 225552801 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618522 M 4 0 0 CDC42BPA CHM esv1982712 1 225548686 225549411 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4807333 M 1 0 1 CDC42BPA NA18507 esv2628592 1 225548731 225550100 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5355185 M 1 0 1 CDC42BPA NA18507 esv4979 1 225548834 225549414 CNV loss Wang_et_al_2008 18987735 Sequencing essv27420 M 1 0 1 CDC42BPA YH esv2565209 1 225564988 225566475 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5292433 M 1 0 1 CDC42BPA NA18507 esv3310254 1 225569045 225569046 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836730 M 185 1 0 CDC42BPA NA19239 esv3340080 1 225569064 225569102 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673937,essv8673936,essv8673935 M 185 3 0 CDC42BPA NA19238,NA19239,NA19240 esv3307225 1 225569077 225569078 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7755382,essv7762796,essv7756439,essv7761860,essv7750311,essv7757114,essv7744716,essv7754349,essv7749815,essv7749409,essv7745574,essv7752005,essv7750588,essv7743912,essv7746080,essv7742197,essv7761688,essv7755042,essv7759858,essv7746669,essv7756085 M 185 21 0 CDC42BPA NA10847,NA12003,NA12154,NA12155,NA12716,NA18511,NA18516,NA18519,NA18523,NA18870,NA18912,NA19093,NA19108,NA19138,NA19147,NA19172,NA19190,NA19238,NA19239,NA19240,NA19257 esv3370426 1 225569077 225569097 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903413,essv8903412,essv8903418,essv8903420,essv8903409,essv8903417,essv8903419,essv8903406,essv8903402,essv8903408,essv8903405,essv8903416,essv8903404,essv8903411,essv8903415,essv8903407,essv8903410,essv8903421 M 185 18 0 CDC42BPA NA10847,NA12003,NA12154,NA12155,NA12716,NA18511,NA18516,NA18519,NA18523,NA18870,NA18912,NA19093,NA19108,NA19138,NA19147,NA19172,NA19190,NA19257 nsv1003278 1 225629749 225745087 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488242 M 29084 0 1 "" nsv4777 1 225641963 225674742 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4998 M 9 1 0 "" NA19129 nsv523549 1 225662589 225662903 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699327 M 2026 0 1 "" dgv293e59 1 225668742 225668910 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302541,esv3302979 M 185 8 0 "" NA07051,NA11918,NA12717,NA12750,NA12763,NA12878,NA12892,NA18558 esv3345579 1 225668763 225668910 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670866,essv8670865 M 185 2 0 "" NA12878,NA12892 esv1475719 1 225668901 225668901 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4057778 M 2 1 0 "" HuRef nsv945335 1 225684782 225685455 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820986,nssv1821644,nssv1821000,nssv1821687,nssv1820980,nssv1821663,nssv1821677,nssv1821646,nssv1821672,nssv1820976,nssv1820991,nssv1821662,nssv1820990,nssv1821657,nssv1820982,nssv1821661,nssv1820996,nssv1821655,nssv1820981,nssv1821002,nssv1820985,nssv1821652,nssv1820995,nssv1821659,nssv1821673,nssv1821651,nssv1820992,nssv1821006,nssv1821678,nssv1821027,nssv1821005,nssv1821022,nssv1820987,nssv1821664,nssv1821676,nssv1821012,nssv1820983,nssv1821681,nssv1821004,nssv1821001,nssv1820984,nssv1821020,nssv1820988,nssv1821025,nssv1820994,nssv1821647,nssv1821669,nssv1821683,nssv1821671,nssv1821682,nssv1820993,nssv1821648,nssv1820998,nssv1821654,nssv1820977,nssv1821656,nssv1821674,nssv1821665,nssv1821007,nssv1821008,nssv1820979,nssv1821009,nssv1821675,nssv1820999,nssv1820989,nssv1821016,nssv1820978,nssv1821026,nssv1820997,nssv1821017,nssv1821670,nssv1821645,nssv1821018,nssv1821685,nssv1821011,nssv1821653,nssv1821015,nssv1821003,nssv1821668,nssv1821023,nssv1821021,nssv1821019,nssv1821658,nssv1821666,nssv1821688,nssv1821650,nssv1821686,nssv1821024,nssv1821680,nssv1821013,nssv1821667,nssv1821679,nssv1821014,nssv1821010,nssv1821684,nssv1821649,nssv1821660 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945336 1 225686853 225689421 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821696,nssv1821758,nssv1821767,nssv1821785,nssv1821713,nssv1821760,nssv1821690,nssv1821689,nssv1821771,nssv1821765,nssv1821769,nssv1821744,nssv1821692,nssv1821746,nssv1821773,nssv1821737,nssv1821710,nssv1821726,nssv1821774,nssv1821782,nssv1821694,nssv1821759,nssv1821709,nssv1821757,nssv1821766,nssv1821784,nssv1821770,nssv1821727,nssv1821703,nssv1821716,nssv1821717,nssv1821749,nssv1821708,nssv1821752,nssv1821698,nssv1821754,nssv1821718,nssv1821761,nssv1821720,nssv1821740,nssv1821705,nssv1821748,nssv1821695,nssv1821756,nssv1821699,nssv1821725,nssv1821768,nssv1821739,nssv1821700,nssv1821743,nssv1821697,nssv1821729,nssv1821701,nssv1821778,nssv1821707,nssv1821721,nssv1821711,nssv1821719,nssv1821706,nssv1821712,nssv1821772,nssv1821724,nssv1821702,nssv1821780,nssv1821775,nssv1821735,nssv1821693,nssv1821738,nssv1821704,nssv1821751,nssv1821691,nssv1821779,nssv1821745,nssv1821734,nssv1821728,nssv1821762,nssv1821753,nssv1821742,nssv1821781,nssv1821732,nssv1821733,nssv1821715,nssv1821730,nssv1821731,nssv1821723,nssv1821722,nssv1821750,nssv1821736,nssv1821763,nssv1821747,nssv1821777,nssv1821714,nssv1821755,nssv1821764,nssv1821741,nssv1821783,nssv1821776 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7190 1 225719939 225751123 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv574,nssv6181 M 9 0 0 "" NA12156,NA19240 nsv945337 1 225747174 225779106 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821793,nssv1821828,nssv1821801,nssv1821840,nssv1821787,nssv1821882,nssv1821794,nssv1821811,nssv1821810,nssv1821856,nssv1821799,nssv1821880,nssv1821866,nssv1821833,nssv1821790,nssv1821820,nssv1821797,nssv1821855,nssv1821863,nssv1821827,nssv1821806,nssv1821857,nssv1821805,nssv1821838,nssv1821867,nssv1821862,nssv1821791,nssv1821852,nssv1821808,nssv1821786,nssv1821802,nssv1821861,nssv1821871,nssv1821812,nssv1821872,nssv1821834,nssv1821792,nssv1821881,nssv1821800,nssv1821841,nssv1821789,nssv1821879,nssv1821817,nssv1821849,nssv1821814,nssv1821813,nssv1821868,nssv1821825,nssv1821807,nssv1821843,nssv1821870,nssv1821845,nssv1821804,nssv1821824,nssv1821803,nssv1821818,nssv1821815,nssv1821854,nssv1821865,nssv1821875,nssv1821869,nssv1821823,nssv1821864,nssv1821846,nssv1821795,nssv1821837,nssv1821788,nssv1821853,nssv1821796,nssv1821851,nssv1821798,nssv1821858,nssv1821822,nssv1821873,nssv1821876,nssv1821829,nssv1821809,nssv1821836,nssv1821842,nssv1821826,nssv1821877,nssv1821821,nssv1821848,nssv1821859,nssv1821850,nssv1821831,nssv1821878,nssv1821816,nssv1821839,nssv1821832,nssv1821835,nssv1821830,nssv1821847,nssv1821874,nssv1821860,nssv1821844,nssv1821819 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1403387 1 225748162 225750091 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3625539 M 2 0 0 "" HuRef esv3349615 1 225751752 225753650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692135 M 185 1 0 "" NA19238 nsv1007479 1 225762491 226051089 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493501 M 29084 1 0 JMJD4,LOC100130093,SNAP47,ZNF678,ZNF847P nsv945339 1 225789168 225790165 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821907,nssv1822886,nssv1821902,nssv1821148,nssv1821158,nssv1822888,nssv1821153,nssv1821167,nssv1821924,nssv1822885,nssv1821915,nssv1821139,nssv1821903,nssv1821161,nssv1821901,nssv1821938,nssv1821913,nssv1822884,nssv1821904,nssv1821942,nssv1821909,nssv1821925,nssv1821905,nssv2605667,nssv1821155,nssv2605659,nssv1821154,nssv1821934,nssv1821920,nssv1821163,nssv1821922,nssv1822879,nssv1821159,nssv1822877,nssv1821919,nssv2604400,nssv1821914,nssv1822883,nssv1821916,nssv1821160,nssv2605661,nssv1821947,nssv1821929,nssv1821149,nssv1821906,nssv1821948,nssv1821156,nssv1821168,nssv2605666,nssv1821941,nssv1821152,nssv1821169,nssv1821908,nssv1821926,nssv1821911,nssv1821927,nssv1821931,nssv1821147,nssv1821918,nssv1821900,nssv1821151,nssv1821144,nssv1821150,nssv1821932,nssv1821928,nssv1821939,nssv1821917,nssv1821141,nssv2605665,nssv1821951,nssv1821910,nssv1821140,nssv1821912,nssv2605664,nssv1821921,nssv1821949,nssv1821157,nssv1821945,nssv1821142,nssv1822882,nssv1821937,nssv1821940,nssv1821143,nssv1821923,nssv1821138,nssv1821936,nssv1821950,nssv1822881,nssv1821146,nssv1821944,nssv1821164,nssv1821943,nssv1821162,nssv1821166,nssv1822887,nssv1821145,nssv2605663,nssv1821933,nssv1821935,nssv2605662,nssv1821930,nssv2605660,nssv2605668,nssv1822880,nssv1821946,nssv1822878,nssv1821165,nssv1822876 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945340 1 225825546 225827181 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821185,nssv1821197,nssv1821194,nssv1821262,nssv1821174,nssv1821203,nssv1821183,nssv1821200,nssv1821252,nssv1821215,nssv1821199,nssv1821258,nssv1821184,nssv1821217,nssv1821176,nssv1821212,nssv1821175,nssv1821264,nssv1821190,nssv1821236,nssv1821191,nssv1821204,nssv1821254,nssv1821231,nssv1821181,nssv1821193,nssv1821251,nssv1821263,nssv1821189,nssv1821226,nssv1821186,nssv1821207,nssv1821256,nssv1821244,nssv1821172,nssv1821218,nssv1821177,nssv1821209,nssv1821255,nssv1821222,nssv1821178,nssv1821196,nssv1821179,nssv1821227,nssv1821173,nssv1821246,nssv1821253,nssv1821266,nssv1821171,nssv1821208,nssv1821247,nssv1821257,nssv1821188,nssv1821245,nssv1821248,nssv1821265,nssv1821198,nssv1821241,nssv1821250,nssv1821228,nssv1821187,nssv1821195,nssv1821249,nssv1821224,nssv1821180,nssv1821221,nssv1821182,nssv1821225,nssv1821201,nssv1821237,nssv1821192,nssv1821260,nssv1821242,nssv1821230,nssv1821240,nssv1821214,nssv1821206,nssv1821233,nssv1821239,nssv1821232,nssv1821170,nssv1821235,nssv1821234,nssv1821213,nssv1821219,nssv1821223,nssv1821229,nssv1821205,nssv1821202,nssv1821243,nssv1821210,nssv1821211,nssv1821216,nssv1821238,nssv1821220,nssv1821261,nssv1821259 M 97 10 0 ZNF678 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3407161 1 225825663 225825671 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740927 M 185 1 0 ZNF678 NA12878 nsv945341 1 225851368 225854007 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821296,nssv1821335,nssv1821280,nssv1821294,nssv1821291,nssv1821314,nssv1821961,nssv1821957,nssv1821271,nssv1821290,nssv1821963,nssv1821971,nssv1821295,nssv1821316,nssv1821965,nssv1821308,nssv1821273,nssv1821975,nssv1821287,nssv1821954,nssv1821286,nssv1821977,nssv1821964,nssv1821979,nssv1821282,nssv1821320,nssv1821272,nssv1821312,nssv1821283,nssv1821297,nssv1821969,nssv1821307,nssv1821960,nssv1821300,nssv1821281,nssv1821970,nssv1821270,nssv1821952,nssv1821278,nssv1821958,nssv1821277,nssv1821953,nssv1821968,nssv1821317,nssv1821274,nssv1821959,nssv1821962,nssv1821309,nssv1821275,nssv1821293,nssv1821268,nssv1821315,nssv1821967,nssv1821333,nssv1821285,nssv1821328,nssv1821288,nssv1821978,nssv1821269,nssv1821306,nssv1821284,nssv1821304,nssv1821279,nssv1821319,nssv1821276,nssv1821301,nssv1821966,nssv1821292,nssv1821289,nssv1821955,nssv1821298,nssv1821313,nssv1821327,nssv1821311,nssv1821323,nssv1821305,nssv1821324,nssv1821325,nssv1821299,nssv1821302,nssv1821322,nssv1821330,nssv1821321,nssv1821972,nssv1821334,nssv1821318,nssv1821973,nssv1821310,nssv1821267,nssv1821303,nssv1821974,nssv1821956,nssv1821329,nssv1821332,nssv1821976,nssv1821331,nssv1821326 M 97 10 0 ZNF678 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv475962 1 225852812 225852812 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019705 M 9 1 0 ZNF678 NA12878 nsv945342 1 225886018 225896530 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821990,nssv1822019,nssv1821987,nssv1822041,nssv1821995,nssv1822023,nssv1822004,nssv1822038,nssv1821981,nssv1822029,nssv1822060,nssv1822024,nssv1821993,nssv1822033,nssv1821982,nssv1822013,nssv1821984,nssv1822025,nssv1821985,nssv1822076,nssv1822057,nssv1822074,nssv1821983,nssv1822072,nssv1822002,nssv1822068,nssv1822000,nssv1822054,nssv1822061,nssv1822046,nssv1821999,nssv1822049,nssv1821994,nssv1822075,nssv1821989,nssv1822067,nssv1821996,nssv1822056,nssv1822066,nssv1822028,nssv1822062,nssv1822022,nssv1821991,nssv1822050,nssv1821986,nssv1822027,nssv1822009,nssv1822005,nssv1821988,nssv1822051,nssv1821992,nssv1822073,nssv1822058,nssv1822014,nssv1822064,nssv1822039,nssv1822008,nssv1822055,nssv1822001,nssv1822006,nssv1822065,nssv1822007,nssv1821998,nssv1822010,nssv1822059,nssv1822040,nssv1821997,nssv1822045,nssv1822011,nssv1822018,nssv1822063,nssv1822037,nssv1822047,nssv1822017,nssv1822043,nssv1822031,nssv1821980,nssv1822069,nssv1822012,nssv1822052,nssv1822021,nssv1822016,nssv1822035,nssv1822015,nssv1822003,nssv1822034,nssv1822032,nssv1822020,nssv1822048,nssv1822042,nssv1822036,nssv1822026,nssv1822044,nssv1822030,nssv1822053,nssv1822070,nssv1822071 M 97 10 0 ZNF678 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945343 1 225899966 225901006 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1822160,nssv1822104,nssv1822105,nssv1822123,nssv1822086,nssv1822152,nssv1822099,nssv1822141,nssv1822090,nssv1822130,nssv1822084,nssv1822116,nssv1822092,nssv1822135,nssv1822087,nssv1822132,nssv1822101,nssv1822126,nssv1822157,nssv1822165,nssv1822078,nssv1822120,nssv1822081,nssv1822168,nssv1822156,nssv1822107,nssv1822155,nssv1822173,nssv1822082,nssv1822151,nssv1822079,nssv1822119,nssv1822097,nssv1822121,nssv1822158,nssv1822112,nssv1822096,nssv1822169,nssv1822093,nssv1822146,nssv1822091,nssv1822138,nssv1822163,nssv1822171,nssv1822106,nssv1822111,nssv1822083,nssv1822122,nssv1822094,nssv1822170,nssv1822085,nssv1822136,nssv1822080,nssv1822164,nssv1822154,nssv1822125,nssv1822161,nssv1822147,nssv1822095,nssv1822148,nssv1822162,nssv1822110,nssv1822159,nssv1822153,nssv1822089,nssv1822172,nssv1822088,nssv1822115,nssv1822098,nssv1822102,nssv1822108,nssv1822129,nssv1822118,nssv1822124,nssv1822103,nssv1822143,nssv1822134,nssv1822144,nssv1822167,nssv1822127,nssv1822100,nssv1822166,nssv1822140,nssv1822077,nssv1822142,nssv1822145,nssv1822149,nssv1822128,nssv1822131,nssv1822114,nssv1822139,nssv1822150,nssv1822117,nssv1822133,nssv1822137,nssv1822109,nssv1822113 M 97 10 0 ZNF678 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv33212 1 225945903 225946228 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv100064 M 51 0 1 "" 22086 esv32853 1 225946739 226872832 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99963 M 51 1 0 ARF1,C1orf145,C1orf35,DUSP5P1,GJC2,GUK1,HIST3H2A,HIST3H2BB,HIST3H3,IBA57,IBA57-AS1,JMJD4,LOC100130093,MIR3620,MIR4666A,MIR5008,MIR6742,MRPL55,OBSCN,PRSS38,RHOU,RNF187,SNAP47,TRIM11,TRIM17,WNT3A,WNT9A,ZNF847P 22086 nsv826908 1 225962009 226757723 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423897 M 31 1 0 ARF1,C1orf145,C1orf35,GJC2,GUK1,HIST3H2A,HIST3H2BB,HIST3H3,IBA57,IBA57-AS1,JMJD4,LOC100130093,MIR3620,MIR4666A,MIR5008,MIR6742,MRPL55,OBSCN,PRSS38,RNF187,SNAP47,TRIM11,TRIM17,WNT3A,WNT9A NA18968 nsv945344 1 225966562 225984399 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1822181,nssv1823187,nssv1822198,nssv1822197,nssv1822189,nssv1822228,nssv1822203,nssv1822234,nssv1822251,nssv1822214,nssv1822179,nssv1822243,nssv1822257,nssv1823188,nssv1822175,nssv1822247,nssv1822253,nssv1822242,nssv1822187,nssv1822215,nssv1822255,nssv1822236,nssv1822194,nssv1822204,nssv1822180,nssv1822230,nssv1822193,nssv1823194,nssv1822188,nssv1822224,nssv1822252,nssv1822210,nssv1822202,nssv1822213,nssv1823184,nssv1823186,nssv1822196,nssv1822246,nssv1822195,nssv1822217,nssv1822186,nssv1822232,nssv1822185,nssv1822223,nssv1822182,nssv1822226,nssv1822184,nssv1822248,nssv1822176,nssv1822238,nssv1822192,nssv1822227,nssv1822254,nssv1822209,nssv1822191,nssv1822218,nssv1822256,nssv1823185,nssv1822258,nssv1822222,nssv1822259,nssv1822233,nssv1822183,nssv1823192,nssv1822177,nssv1822229,nssv1822178,nssv1822206,nssv1822205,nssv1822231,nssv1822190,nssv1822245,nssv1822244,nssv1823189,nssv1822250,nssv1823193,nssv1822235,nssv1822249,nssv1823190,nssv1822219,nssv1822200,nssv1822199,nssv1822207,nssv1822201,nssv1822208,nssv1822216,nssv1822221,nssv1822212,nssv1822241,nssv1822220,nssv1822211,nssv1822240,nssv1822239,nssv1823191,nssv1822174,nssv1822225,nssv1822237 M 97 10 0 LOC100130093 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv515496 1 225979097 226034561 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv706069,nssv653322,nssv669589,nssv685630,nssv656192,nssv691302,nssv655930,nssv658371,nssv656035,nssv682125,nssv678134,nssv672343,nssv657033,nssv683178,nssv687627,nssv692887,nssv655111,nssv675688,nssv661954,nssv664423,nssv670947,nssv660970,nssv691322,nssv688321,nssv674739,nssv663718,nssv657798 M 2026 0 27 JMJD4,LOC100130093,SNAP47 nsv549272 1 226002385 226112371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737370 M 17421 0 1 PRSS38,SNAP47 esv8091 1 226012928 226013087 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30532 M 1 0 0 SNAP47 dgv294e59 1 226021352 226022550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3388809,esv3331526 M 185 2 0 SNAP47 NA19239,NA19240 nsv998933 1 226059551 226125919 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493779,nssv3485389,nssv3501577 M 29084 0 3 PRSS38 nsv549273 1 226062589 226117857 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737371 M 17421 0 1 PRSS38 esv3891170 1 226072681 226088526 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785892 M 3017 0 1 PRSS38 nsv519324 1 226072681 226090091 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696792 M 2026 1 0 PRSS38 dgv26n21 1 226082993 226086465 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv528332,nsv522256 M 2026 2 0 PRSS38 nsv468249 1 226082993 226112131 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543377 M 1557 0 1 PRSS38 1780854495_A nsv549274 1 226082993 226112131 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174052 M 17421 0 1 PRSS38 1780854495_A esv2632112 1 226090141 226091755 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5170586 M 1 0 1 PRSS38 NA18507 esv998645 1 226090277 226091028 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563613 M 3 0 1 PRSS38 HuRef esv2384898 1 226090551 226091241 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4846383 M 1 0 1 PRSS38 NA18507 esv7960 1 226090568 226091225 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30401 M 1 0 0 PRSS38 dgv8n6 1 226090717 226091041 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159589,nsv160557 M 24 PRSS38 esv1562504 1 226090729 226091041 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4303572 M 2 0 1 PRSS38 HuRef nsv516409 1 226101754 226363368 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv688018,nssv695015,nssv654535,nssv677714,nssv669590,nssv684814,nssv668165 M 2026 0 7 ARF1,C1orf35,MIR3620,MIR5008,MRPL55,WNT3A,WNT9A nsv523935 1 226104747 226748372 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699781 M 2026 0 1 ARF1,C1orf145,C1orf35,GJC2,GUK1,HIST3H2A,HIST3H2BB,HIST3H3,IBA57,IBA57-AS1,MIR3620,MIR4666A,MIR5008,MIR6742,MRPL55,OBSCN,RNF187,TRIM11,TRIM17,WNT3A,WNT9A esv2762172 1 226153457 226167878 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005767 M 1109 0 1 "" SW_0006 esv2062920 1 226160861 226161285 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4977365 M 1 0 1 "" NA18507 esv2392264 1 226164052 226164401 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4580717 M 1 0 1 "" NA18507 esv3426585 1 226170552 226171450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692138 M 185 1 0 "" NA19240 esv3415950 1 226170752 226171250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692139 M 185 1 0 "" NA19239 nsv826920 1 226173533 226183111 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432587 M 31 1 0 WNT9A NA18972 nsv826931 1 226179088 226179632 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431869 M 31 0 1 WNT9A AK20 nsv826942 1 226185553 226191512 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436390 M 31 1 0 WNT9A NA18542 nsv945346 1 226217898 226218779 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820525,nssv1820589,nssv1820544,nssv2604759,nssv1820524,nssv1820574,nssv2604729,nssv2604749,nssv1820597,nssv1820558,nssv1820534,nssv1820561,nssv1820526,nssv1820566,nssv1820530,nssv2604732,nssv1820593,nssv2604762,nssv1820540,nssv1820575,nssv1820523,nssv2604731,nssv2604733,nssv2604754,nssv1820596,nssv1820573,nssv1820591,nssv1820570,nssv1820594,nssv2604747,nssv1820527,nssv2604766,nssv1820599,nssv2604738,nssv1820598,nssv1820582,nssv1820536,nssv1820557,nssv1820595,nssv1820559,nssv1820532,nssv2604737,nssv1820551,nssv2604769,nssv1820539,nssv1820578,nssv1820522,nssv1820552,nssv1820528,nssv1820588,nssv1820590,nssv1820565,nssv1820538,nssv1820562,nssv1820537,nssv1820563,nssv2604734,nssv2604753,nssv1820533,nssv2604750,nssv1820535,nssv1820586,nssv1820549,nssv2604752,nssv1820542,nssv2604745,nssv1820529,nssv1820564,nssv1820531,nssv2604743,nssv1820592,nssv1820572,nssv1820541,nssv2604744,nssv1820521,nssv1820567,nssv1820548,nssv2604739,nssv2604755,nssv2604764,nssv1820568,nssv1820556,nssv1820550,nssv1820581,nssv2604740,nssv2604746,nssv2604771,nssv2604726,nssv2604728,nssv1820577,nssv2604742,nssv1820543,nssv1820571,nssv1820587,nssv2604760,nssv2604751,nssv2604757,nssv1820576,nssv1820584,nssv2604761,nssv2604756,nssv1820579,nssv1820546,nssv2604748,nssv2604768,nssv2604741,nssv2604727,nssv1820555,nssv2604758,nssv2604772,nssv2604730,nssv2604735,nssv2604765,nssv2604736,nssv1820585,nssv1820545,nssv2604774,nssv2604767,nssv1820547,nssv1820520,nssv1820553,nssv2604773,nssv1820569,nssv1820560,nssv2604770,nssv1820583,nssv2604763,nssv1820580,nssv1820554 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945347 1 226218779 226239992 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820624,nssv1820660,nssv1820685,nssv1820653,nssv1820604,nssv1820663,nssv1820603,nssv1820648,nssv1820614,nssv1820689,nssv1820606,nssv1820667,nssv1820680,nssv1820646,nssv1820622,nssv1820665,nssv1820620,nssv1820640,nssv1820631,nssv1820669,nssv1820629,nssv1820670,nssv1820609,nssv1820650,nssv1820681,nssv1820691,nssv1820612,nssv1820641,nssv1820619,nssv1820639,nssv1820683,nssv1820634,nssv1820686,nssv1820664,nssv1820607,nssv1820627,nssv1820605,nssv1820658,nssv1820616,nssv1820632,nssv1820601,nssv1820668,nssv1820678,nssv1820673,nssv1820682,nssv1820690,nssv1820613,nssv1820662,nssv1820608,nssv1820645,nssv1820618,nssv1820642,nssv1820617,nssv1820692,nssv1820677,nssv1820647,nssv1820610,nssv1820643,nssv1820602,nssv1820638,nssv1820684,nssv1820656,nssv1820611,nssv1820675,nssv1820679,nssv1820688,nssv1820621,nssv1820637,nssv1820615,nssv1820694,nssv1820628,nssv1820693,nssv1820687,nssv1820674,nssv1820636,nssv1820633,nssv1820666,nssv1820630,nssv1820654,nssv1820661,nssv1820623,nssv1820657,nssv1820626,nssv1820659,nssv1820695,nssv1820652,nssv1820655,nssv1820671,nssv1820676,nssv1820635,nssv1820651,nssv1820696,nssv1820649,nssv1820625,nssv1820672,nssv1820644,nssv1820600 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832803 1 226221741 226380304 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441694 M 95 0 1 ARF1,C1orf35,MIR3620,MRPL55,WNT3A esv22404 1 226225181 226228486 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18813 M 40 0 1 "" NA11993 nsv947074 1 226232055 226239992 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604787,nssv2604805,nssv2604846,nssv2604810,nssv2604785,nssv2604833,nssv2604852,nssv2604827,nssv2604799,nssv2604837,nssv2604797,nssv2604811,nssv2604850,nssv2604832,nssv2604793,nssv2604821,nssv2604853,nssv2604843,nssv2604796,nssv2604838,nssv2604788,nssv2604835,nssv2604792,nssv2604836,nssv2604790,nssv2604842,nssv2604804,nssv2604817,nssv2604807,nssv2604844,nssv2604854,nssv2604830,nssv2604845,nssv2604829,nssv2604849,nssv2604840,nssv2604777,nssv2604775,nssv2604784,nssv2604825,nssv2604791,nssv2604839,nssv2604779,nssv2604798,nssv2604800,nssv2604813,nssv2604780,nssv2604823,nssv2604806,nssv2604831,nssv2604778,nssv2604812,nssv2604847,nssv2604822,nssv2604851,nssv2604819,nssv2604786,nssv2604814,nssv2604848,nssv2604815,nssv2604783,nssv2604824,nssv2604794,nssv2604820,nssv2604782,nssv2604808,nssv2604781,nssv2604801,nssv2604789,nssv2604841,nssv2604776,nssv2604802,nssv2604795,nssv2604834,nssv2604803,nssv2604809,nssv2604818,nssv2604826,nssv2604816,nssv2604828 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945348 1 226239992 226253179 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1820701,nssv1822297,nssv1820711,nssv1822272,nssv1822268,nssv1822288,nssv1820709,nssv1822303,nssv1820703,nssv1822300,nssv1822261,nssv1822283,nssv1820717,nssv1822269,nssv1822310,nssv1820697,nssv1822313,nssv1822277,nssv1820700,nssv1822260,nssv1820702,nssv1822291,nssv1820708,nssv1822267,nssv1820698,nssv1822293,nssv1822307,nssv1822299,nssv1820716,nssv1822296,nssv1822312,nssv1822287,nssv1820710,nssv1822276,nssv1822311,nssv1822273,nssv1822266,nssv1822295,nssv1820704,nssv1822290,nssv1820713,nssv1822301,nssv1822308,nssv1822278,nssv1822309,nssv1822289,nssv1820699,nssv1822286,nssv1822316,nssv1822280,nssv1820705,nssv1822284,nssv1820715,nssv1822306,nssv1820707,nssv1822285,nssv1820714,nssv1822292,nssv1822314,nssv1822282,nssv1822265,nssv1822281,nssv1820719,nssv1822298,nssv1820706,nssv1822271,nssv1820718,nssv1822262,nssv1822315,nssv1822263,nssv1820712,nssv1822264,nssv1822270,nssv1822302,nssv1822279,nssv1822294,nssv1822275,nssv1822305,nssv1822274,nssv1822304 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv476006 1 226253055 226253055 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015813 M 9 1 0 "" NA12878 nsv826953 1 226258552 226263490 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432598 M 31 1 0 WNT3A NA18972 nsv826964 1 226313425 226314277 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1429611 M 31 1 0 WNT3A AK14 esv2593706 1 226321896 226324272 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5290297 M 1 0 1 "" NA18507 esv27321 1 226321898 226327823 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10341 M 40 3 0 "" NA06985,NA11894,NA12776 nsv821395 1 226321898 226327823 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421002 M 1 0 1 "" NA10851 dgv835n54 1 226322056 226323717 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549275,nsv549282 M 17421 0 4 "" nsv549276 1 226322056 226325599 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737374 M 17421 0 1 "" dgv836n54 1 226322056 226326910 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549278,nsv549277,nsv549279,nsv549283,nsv549286 M 17421 51 19 "" dgv837n54 1 226322056 226327914 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549281,nsv549280 M 17421 10 0 "" nsv549284 1 226322352 226327914 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737448 M 17421 0 1 "" dgv104n67 1 226322821 226326786 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv826975,nsv826986,nsv826997 M 31 0 3 "" NA18582,NA18973,NA18999 dgv838n54 1 226323023 226326910 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549287,nsv549285 M 17421 0 2 "" nsv827008 1 226323390 226326718 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436391 M 31 1 0 "" NA18542 nsv482143 1 226361003 226363636 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558504 M 1 1 0 MRPL55 KB1 nsv827019 1 226380790 226717643 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434907 M 31 0 1 C1orf145,GJC2,GUK1,HIST3H2A,HIST3H2BB,HIST3H3,IBA57,IBA57-AS1,MIR4666A,MIR6742,OBSCN,TRIM11,TRIM17 NA18942 dgv839n54 1 226394282 226437721 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549288,nsv549289 M 17421 0 2 GJC2,GUK1,IBA57,IBA57-AS1 nsv549290 1 226400275 226416429 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737462 M 17421 0 1 GJC2,GUK1 nsv549291 1 226405562 226417397 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737463 M 17421 0 1 GJC2 nsv473804 1 226407016 226407016 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017862 M 9 1 0 GJC2 NA12156 nsv827031 1 226410705 226416413 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1424521 M 31 1 0 GJC2 NA18947 dgv105n67 1 226411360 226414569 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv827042,nsv827053 M 31 2 0 GJC2 NA18526,NA18972 esv4840 1 226428422 226428881 CNV loss Wang_et_al_2008 18987735 Sequencing essv27281 M 1 0 1 IBA57 YH esv1008511 1 226428612 226428835 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566712 M 3 0 1 IBA57 HuRef esv1771567 1 226428647 226428839 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3951406 M 2 0 1 IBA57 HuRef nsv474639 1 226463844 226463844 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015417 M 9 1 0 C1orf145,OBSCN NA18956 nsv520340 1 226490559 226522770 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697358 M 2026 1 0 OBSCN nsv945350 1 226515344 226518592 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1822406,nssv1822380,nssv1822404,nssv1822426,nssv1822414,nssv1822352,nssv1822409,nssv1822363,nssv1822387,nssv1822359,nssv1822438,nssv1822377,nssv1822421,nssv1822427,nssv1822386,nssv1822353,nssv1822349,nssv1822356,nssv1822416,nssv1822429,nssv1822440,nssv1822373,nssv1822415,nssv1822364,nssv1822439,nssv1822435,nssv1822412,nssv1822354,nssv1822400,nssv1822362,nssv1822395,nssv1822369,nssv1822417,nssv1822360,nssv1822389,nssv1822368,nssv1822405,nssv1822365,nssv1822422,nssv1822350,nssv1822407,nssv1822430,nssv1822399,nssv1822361,nssv1822390,nssv1822432,nssv1822372,nssv1822370,nssv1822385,nssv1822357,nssv1822379,nssv1822355,nssv1822411,nssv1822428,nssv1822403,nssv1822431,nssv1822413,nssv1822367,nssv1822388,nssv1822366,nssv1822381,nssv1822378,nssv1822437,nssv1822371,nssv1822423,nssv1822433,nssv1822419,nssv1822351,nssv1822408,nssv1822358,nssv1822445,nssv1822434,nssv1822376,nssv1822401,nssv1822441,nssv1822392,nssv1822436,nssv1822398,nssv1822420,nssv1822402,nssv1822418,nssv1822443,nssv1822393,nssv1822425,nssv1822394,nssv1822384,nssv1822397,nssv1822442,nssv1822424,nssv1822374,nssv1822410,nssv1822375,nssv1822396,nssv1822444,nssv1822391,nssv1822382,nssv1822383 M 97 10 0 OBSCN HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv517545 1 226522770 226752622 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv676839,nssv669591,nssv664603,nssv652328,nssv692740,nssv668715,nssv657126,nssv677715,nssv691445,nssv664588,nssv690278,nssv670195,nssv688019,nssv686799,nssv706056 M 2026 0 15 HIST3H2A,HIST3H2BB,HIST3H3,MIR4666A,MIR6742,OBSCN,RNF187,TRIM11,TRIM17 nsv1013500 1 226525757 226916224 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494116 M 29084 1 0 DUSP5P1,HIST3H2A,HIST3H2BB,HIST3H3,MIR4666A,MIR6742,OBSCN,RHOU,RNF187,TRIM11,TRIM17 nsv827064 1 226526557 226536060 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432620 M 31 1 0 OBSCN NA18972 nsv549292 1 226530871 226541440 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737464 M 17421 0 1 OBSCN dgv840n54 1 226530871 226623411 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549294,nsv549293 M 17421 0 2 OBSCN nsv549295 1 226530871 226668261 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737467,nssv737469,nssv737468 M 17421 0 3 MIR6742,OBSCN,TRIM11,TRIM17 nsv470780 1 226530871 226673588 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544418,nssv544417,nssv544416 M 443 0 3 MIR6742,OBSCN,TRIM11,TRIM17 HGDP00298,HGDP00550,HGDP00825 esv995050 1 226535865 226545380 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563715 M 3 0 1 OBSCN HuRef nsv945351 1 226546701 226549697 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1822448,nssv1822510,nssv1822525,nssv1822484,nssv1822449,nssv1822483,nssv1822456,nssv1822480,nssv1822467,nssv1822509,nssv1822526,nssv1822503,nssv1822470,nssv1822518,nssv1822528,nssv1822446,nssv1822453,nssv1822511,nssv1822447,nssv1822536,nssv1822457,nssv1822535,nssv1822450,nssv1822513,nssv1822451,nssv1822514,nssv1822459,nssv1822504,nssv1822477,nssv1822492,nssv1822466,nssv1822486,nssv1822527,nssv1822519,nssv1822465,nssv1822497,nssv1822462,nssv1822512,nssv1822532,nssv1822496,nssv1822458,nssv1822500,nssv1822460,nssv1822506,nssv1822454,nssv1822482,nssv1822452,nssv1822469,nssv1822524,nssv1822487,nssv1822464,nssv1822476,nssv1822455,nssv1822502,nssv1822463,nssv1822517,nssv1822461,nssv1822478,nssv1822523,nssv1822481,nssv1822530,nssv1822508,nssv1822474,nssv1822493,nssv1822475,nssv1822485,nssv1822529,nssv1822534,nssv1822531,nssv1822501,nssv1822468,nssv1822542,nssv1822520,nssv1822538,nssv1822498,nssv1822533,nssv1822540,nssv1822505,nssv1822495,nssv1822537,nssv1822490,nssv1822489,nssv1822516,nssv1822494,nssv1822499,nssv1822473,nssv1822491,nssv1822515,nssv1822472,nssv1822522,nssv1822539,nssv1822507,nssv1822479,nssv1822541,nssv1822471,nssv1822521,nssv1822488 M 97 10 0 OBSCN HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945352 1 226557490 226564150 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823498,nssv1821471,nssv1822565,nssv1821473,nssv1823496,nssv1821511,nssv1821498,nssv1821478,nssv1822545,nssv1821477,nssv1822567,nssv1823493,nssv1822550,nssv1821485,nssv1822547,nssv1821462,nssv1822558,nssv1821507,nssv1821503,nssv1823492,nssv1822548,nssv1821474,nssv1821499,nssv1821468,nssv1821495,nssv1821480,nssv1821504,nssv1821490,nssv1822563,nssv1821508,nssv1821502,nssv1821461,nssv1822562,nssv1821464,nssv1821497,nssv1821453,nssv1822559,nssv1821509,nssv1822557,nssv1821483,nssv1822546,nssv1823497,nssv1822544,nssv1822543,nssv1822552,nssv1821482,nssv1822564,nssv1821491,nssv1822551,nssv1821463,nssv1822553,nssv1821467,nssv1821501,nssv1821506,nssv1822554,nssv1821451,nssv1822561,nssv1821458,nssv1822549,nssv1821459,nssv1823495,nssv1821457,nssv1821500,nssv1821510,nssv1821496,nssv1821492,nssv1822555,nssv1821466,nssv1822560,nssv1821486,nssv1822556,nssv1822566,nssv1821460,nssv1821465,nssv1821512,nssv1821470,nssv1821484,nssv1821479,nssv1821455,nssv1821514,nssv1821505,nssv1821513,nssv1821476,nssv1821494,nssv1821452,nssv1821475,nssv1821456,nssv1821493,nssv1823499,nssv1821489,nssv1821469,nssv1821481,nssv1821472,nssv1821454,nssv1823494,nssv1821488,nssv1821487 M 97 10 0 OBSCN HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3443546 1 226563952 226565250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692140 M 185 1 0 OBSCN NA19239 nsv508697 1 226606660 226689237 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620154 M 4 0 1 HIST3H3,MIR6742,OBSCN,TRIM11,TRIM17 NA15510 esv2640294 1 226638072 226639714 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5195658 M 1 0 1 "" NA18507 esv6596 1 226638578 226639367 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29037 M 1 0 0 "" esv1954034 1 226638601 226639312 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4909232 M 1 0 1 "" NA18507 nsv159804 1 226638784 226639112 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178382 M 24 "" nsv549296 1 226652460 226787103 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737470 M 17421 1 0 HIST3H2A,HIST3H2BB,HIST3H3,MIR4666A,RNF187,TRIM11,TRIM17 nsv945353 1 226701489 226704681 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821594,nssv1821555,nssv1821516,nssv1821566,nssv1821519,nssv1821571,nssv1821537,nssv1821608,nssv1821525,nssv1821556,nssv1821544,nssv1821580,nssv1821539,nssv1821585,nssv1821595,nssv1821542,nssv1821592,nssv1821548,nssv1821517,nssv1821560,nssv1821546,nssv1821575,nssv1821535,nssv1821574,nssv1821600,nssv1821577,nssv1821520,nssv1821569,nssv1821529,nssv1821587,nssv1821524,nssv1821582,nssv1821534,nssv1821551,nssv1821518,nssv1821565,nssv1821599,nssv1821578,nssv1821601,nssv1821605,nssv1821521,nssv1821604,nssv1821531,nssv1821541,nssv1821536,nssv1821558,nssv1821597,nssv1821550,nssv1821523,nssv1821538,nssv1821530,nssv1821545,nssv1821528,nssv1821606,nssv1821598,nssv1821561,nssv1821526,nssv1821547,nssv1821527,nssv1821568,nssv1821533,nssv1821579,nssv1821522,nssv1821559,nssv1821532,nssv1821564,nssv1821543,nssv1821588,nssv1821593,nssv1821573,nssv1821596,nssv1821607,nssv1821581,nssv1821603,nssv1821557,nssv2604856,nssv1821589,nssv1821562,nssv1821609,nssv1821554,nssv1821576,nssv1821549,nssv1821584,nssv1821591,nssv1821583,nssv1821602,nssv1821590,nssv1821552,nssv1821563,nssv1821553,nssv1821570,nssv1821611,nssv1821610,nssv1821540,nssv1821586,nssv1821567,nssv1821572,nssv1821515 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945354 1 226712135 226714136 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1821622,nssv1822592,nssv1821636,nssv1822611,nssv1822618,nssv1822605,nssv1821616,nssv1822597,nssv1821623,nssv1821639,nssv1822616,nssv1822608,nssv1821617,nssv1822573,nssv1821643,nssv1822570,nssv1821632,nssv1822586,nssv1821626,nssv1822601,nssv1821631,nssv1822626,nssv1821618,nssv1822574,nssv1821621,nssv1822583,nssv1822617,nssv1822625,nssv1821634,nssv1822593,nssv1821624,nssv1822602,nssv1821628,nssv1822609,nssv1821613,nssv1822599,nssv1822622,nssv1822591,nssv1821629,nssv1822576,nssv1821640,nssv1822582,nssv1821619,nssv1822587,nssv1822614,nssv1822594,nssv1821620,nssv1822604,nssv1821641,nssv1822629,nssv1822615,nssv1822603,nssv1822621,nssv1821642,nssv1822619,nssv1821635,nssv1821614,nssv1822585,nssv1821630,nssv1822588,nssv1821633,nssv1822590,nssv1821625,nssv1822572,nssv1821615,nssv1822577,nssv1822620,nssv1822596,nssv1822613,nssv1822624,nssv1821627,nssv1821638,nssv1822598,nssv1822568,nssv1822632,nssv1822623,nssv1822600,nssv1822575,nssv1822610,nssv1821612,nssv1822578,nssv1822595,nssv1822580,nssv1822628,nssv1822631,nssv1822630,nssv1822589,nssv1822627,nssv1822607,nssv1822579,nssv1821637,nssv1822584,nssv1822581,nssv1822612,nssv1822571,nssv1822606,nssv1822569 M 97 10 0 HIST3H2A,HIST3H2BB HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv841n54 1 226747818 226798300 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549298,nsv549297 M 17421 2 0 RNF187 HGDP00560 nsv468305 1 226747818 226798300 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543429 M 1557 1 0 RNF187 HGDP00560 esv24714 1 226783177 226850297 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15299,esv19715 M 40 11 14 DUSP5P1,RHOU NA06985,NA12156,NA12489,NA15510,NA18508,NA19114,NA19147 nsv827075 1 226783177 226850297 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1439509,nssv1429612,nssv1440177,nssv1438062,nssv1433473,nssv1424009,nssv1436392,nssv1434223,nssv1435740,nssv1432631,nssv1431870,nssv1438627,nssv1427309,nssv1426440,nssv1428870,nssv1425555,nssv1430398,nssv1423908,nssv1437270,nssv1437990,nssv1424534,nssv1421505,nssv1424794,nssv1440868,nssv1428074,nssv1422417,nssv1423180 M 31 0 27 DUSP5P1,RHOU AK10,AK12,AK14,AK16,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18570,NA18582,NA18592,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv945355 1 226783234 226850639 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1822690,nssv1822636,nssv1822686,nssv1822646,nssv1822678,nssv1822641,nssv1822682,nssv1822653,nssv1822709,nssv1822661,nssv1822670,nssv1822662,nssv1822681,nssv1822642,nssv1822703,nssv1822718,nssv1822728,nssv1822640,nssv1822708,nssv1822713,nssv1822666,nssv1822657,nssv1822675,nssv1822644,nssv1822724,nssv1822643,nssv1822705,nssv1822648,nssv1822658,nssv1822638,nssv1822659,nssv1822655,nssv1822725,nssv1822654,nssv1822680,nssv1822714,nssv1822702,nssv1822652,nssv1822694,nssv1822649,nssv1822667,nssv1822719,nssv1822679,nssv1822715,nssv1822723,nssv1822647,nssv1822664,nssv1822710,nssv1822704,nssv1822645,nssv1822673,nssv1822712,nssv1822671,nssv1822639,nssv1822722,nssv1822634,nssv1822691,nssv1822635,nssv1822698,nssv1822651,nssv1822656,nssv1822711,nssv1822696,nssv1822716,nssv1822668,nssv1822650,nssv1822726,nssv1822637,nssv1822699,nssv1822717,nssv1822706,nssv1822663,nssv1822689,nssv1822684,nssv1822683,nssv1822695,nssv1822633,nssv1822674,nssv1822721,nssv1822687,nssv1822701,nssv1822688,nssv1822729,nssv1822669,nssv1822700,nssv1822693,nssv1822665,nssv1822720,nssv1822672,nssv1822697,nssv1822707,nssv1822676,nssv1822692,nssv1822660,nssv1822685,nssv1822677,nssv1822727 M 97 10 0 DUSP5P1,RHOU HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509635 1 226788282 226888608 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623811 M 4 1 0 DUSP5P1,RHOU NA18994 nsv511020 1 226788282 226930908 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618636 M 4 0 0 DUSP5P1,RHOU CHM nsv160594 1 226821095 226823309 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179172 M 24 "" dgv9n6 1 226822360 226824562 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159946,nsv160307 M 24 "" nsv4788 1 226824299 226825206 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1746 M 9 1 0 "" NA18555 dgv10n6 1 226838004 226840255 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159225,nsv159594 M 24 "" nsv1009511 1 226858407 226920288 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487268 M 29084 1 0 RHOU esv2762224 1 226858407 226934279 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7007001 M 1109 1 0 RHOU RW_0589 nsv998255 1 226858407 226985825 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705522 M 29084 1 0 RHOU nsv549299 1 226859869 227522499 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737472 M 17421 1 0 RAB4A,RHOU,SPHAR esv3891181 1 226872478 227055824 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25790478 M 3017 1 0 RHOU nsv511738 1 226881056 226881950 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626383 M 1 0 1 RHOU 1 esv6055 1 226881314 226881957 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28496 M 1 0 0 RHOU esv1454255 1 226881441 226881777 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3784772 M 2 0 1 RHOU HuRef nsv945357 1 226888428 226891151 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1822737,nssv1822756,nssv1822813,nssv1822783,nssv1822742,nssv1822774,nssv1822810,nssv1822801,nssv1822754,nssv1822775,nssv1822734,nssv1822794,nssv1822758,nssv1822789,nssv1822741,nssv1822824,nssv1822751,nssv1822821,nssv1822807,nssv1822825,nssv1822735,nssv1822805,nssv1822745,nssv1822800,nssv1822812,nssv1822779,nssv1822811,nssv1822806,nssv1822746,nssv1822765,nssv1822749,nssv1822797,nssv1822750,nssv1822772,nssv1822809,nssv1822777,nssv1822816,nssv1822763,nssv1822815,nssv1822823,nssv1822744,nssv1822799,nssv1822738,nssv1822755,nssv1822752,nssv1822773,nssv1822748,nssv1822791,nssv1822814,nssv1822802,nssv1822732,nssv1822778,nssv1822731,nssv1822767,nssv1822743,nssv1822768,nssv1822747,nssv1822764,nssv1822739,nssv1822819,nssv1822736,nssv1822795,nssv1822740,nssv1822787,nssv1822808,nssv1822760,nssv1822733,nssv1822788,nssv1822759,nssv1822793,nssv1822757,nssv1822776,nssv1822803,nssv1822820,nssv1822761,nssv1822770,nssv1822730,nssv1822781,nssv1822826,nssv1822780,nssv1822818,nssv1822796,nssv1822766,nssv1822798,nssv1822785,nssv1822786,nssv1822753,nssv1822762,nssv1822792,nssv1822804,nssv1822817,nssv1822771,nssv1822784,nssv1822782,nssv1822822,nssv1822790,nssv1822769 M 97 10 0 RHOU HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv549300 1 226921326 226985825 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737473 M 17421 0 1 RHOU esv3435240 1 226960652 226962750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692148 M 185 1 0 "" NA19239 esv3413309 1 226971650 226971659 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863826 M 185 1 0 "" NA12005 dgv296e59 1 226983952 226985450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3434842,esv3388136 M 185 2 0 "" NA19238,NA19240 esv3426676 1 227026540 227026552 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673940,essv8673939,essv8673938 M 185 3 0 "" NA12891,NA19239,NA19240 esv3308880 1 227026541 227026542 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840970,essv7842024,essv7842997 M 185 3 0 "" NA12891,NA19239,NA19240 esv1326977 1 227026556 227026556 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3721226 M 2 1 0 "" HuRef nsv437266 1 227033244 227034568 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467147 M 60 0 1 "" NA19100 nsv1004943 1 227034807 227061011 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489345 M 29084 0 1 "" nsv820260 1 227089316 227097121 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419844 M 2 0 1 "" AK1 nsv827108 1 227093631 227094515 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1421506,nssv1428076,nssv1427310,nssv1433475,nssv1440869 M 31 0 5 "" AK10,AK8,NA18526,NA18969,NA18997 nsv945358 1 227239854 227248273 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1822908,nssv1822868,nssv1822856,nssv1822895,nssv1822907,nssv1822898,nssv1822901,nssv1823811,nssv1822835,nssv1822911,nssv1822840,nssv1822891,nssv1822851,nssv1823803,nssv1822903,nssv1823801,nssv1822904,nssv1823809,nssv1822843,nssv1822859,nssv1822836,nssv1822892,nssv1822838,nssv1822896,nssv1822831,nssv1822854,nssv1822832,nssv1822916,nssv1822842,nssv1822918,nssv1822905,nssv1822872,nssv1822846,nssv1822919,nssv1822830,nssv1823815,nssv1822847,nssv1822862,nssv1822841,nssv1822869,nssv1822910,nssv1823800,nssv1822845,nssv1822900,nssv1822902,nssv1822915,nssv1822855,nssv1823804,nssv1822849,nssv1823812,nssv1822834,nssv1822899,nssv1822828,nssv1822864,nssv1822848,nssv1822865,nssv1822829,nssv1822853,nssv1822837,nssv1822917,nssv1822844,nssv1823808,nssv1822909,nssv1822860,nssv1822833,nssv1822894,nssv1822839,nssv1822914,nssv1822906,nssv1822874,nssv1823810,nssv1823807,nssv1822873,nssv1822861,nssv1822893,nssv1822852,nssv1822889,nssv1822875,nssv1823805,nssv1823806,nssv1822871,nssv1822913,nssv1822857,nssv1822827,nssv1823814,nssv1822866,nssv1822920,nssv1822867,nssv1822858,nssv1822897,nssv1823802,nssv1822870,nssv1822850,nssv1822863,nssv1822890,nssv1823813,nssv1822912 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv298e59 1 227350752 227352350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3417911,esv3418319 M 185 2 0 "" NA19239,NA19240 esv3433821 1 227351252 227352350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692155 M 185 1 0 "" NA19238 esv3891193 1 227398303 227407375 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797983,essv25796902,essv25796255 M 3017 0 3 "" nsv527652 1 227433809 227440247 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704123 M 2026 0 1 "" nsv516336 1 227438736 227440247 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv676369,nssv667674,nssv693593 M 2026 0 3 "" esv9229 1 227439825 227440583 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31670 M 1 0 0 "" esv3470 1 227439910 227440632 CNV loss Wang_et_al_2008 18987735 Sequencing essv25911 M 1 0 1 "" YH esv25148 1 227478304 227480214 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18349 M 40 0 3 RAB4A NA18505,NA18907,NA19147 nsv827119 1 227500075 227500745 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440870 M 31 1 0 RAB4A NA18969 nsv945360 1 227633600 227637644 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1822966,nssv1823005,nssv1822950,nssv1823014,nssv1823021,nssv1822983,nssv1823015,nssv1822990,nssv1823017,nssv1822974,nssv1822960,nssv1822982,nssv1822948,nssv1823025,nssv1823016,nssv1823004,nssv1822962,nssv1822970,nssv1822967,nssv1822998,nssv1823023,nssv1823026,nssv1822943,nssv1823032,nssv1822942,nssv1823009,nssv1822954,nssv1822993,nssv1822941,nssv1822977,nssv1823019,nssv1822997,nssv1822958,nssv1822991,nssv1822940,nssv1822987,nssv1822947,nssv1823033,nssv1822953,nssv1822965,nssv1822957,nssv1823000,nssv1823024,nssv1823006,nssv1823018,nssv1822992,nssv1822946,nssv1822973,nssv1822952,nssv1823029,nssv1823022,nssv1822981,nssv1822945,nssv1823002,nssv1822949,nssv1823030,nssv1822956,nssv1822980,nssv1822939,nssv1822964,nssv1822951,nssv1823011,nssv1822959,nssv1822971,nssv1822955,nssv1822989,nssv1822944,nssv1823013,nssv1823020,nssv1823008,nssv1822999,nssv1822979,nssv1822976,nssv1822996,nssv1822985,nssv1823010,nssv1822975,nssv1822963,nssv1823031,nssv1823012,nssv1823007,nssv1823003,nssv1822938,nssv1822994,nssv1822968,nssv1822995,nssv1822986,nssv1823001,nssv1822972,nssv1823034,nssv1822969,nssv1822961,nssv1822988,nssv1822984,nssv1823027,nssv1822978,nssv1823028 M 97 10 0 ACTA1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv299e59 1 227655588 227655781 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302452,esv3302775 M 185 12 0 NUP133 NA07346,NA18510,NA18523,NA18853,NA18861,NA19099,NA19102,NA19108,NA19138,NA19147,NA19238,NA19240 esv3379471 1 227655598 227655779 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670867,essv8670868 M 185 2 0 NUP133 NA19238,NA19240 esv3398475 1 227711152 227712650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692156 M 185 1 0 "" NA19239 nsv945361 1 227718279 227720231 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823048,nssv1823069,nssv1823056,nssv1823109,nssv1823038,nssv1823076,nssv1823115,nssv1823091,nssv1823063,nssv1823085,nssv1823059,nssv1823081,nssv1823112,nssv1823067,nssv1823047,nssv1823079,nssv1823039,nssv1823123,nssv1823040,nssv1823095,nssv1823044,nssv1823087,nssv1823057,nssv1823128,nssv1823064,nssv1823122,nssv1823113,nssv1823094,nssv1823116,nssv1823071,nssv1823050,nssv1823106,nssv1823120,nssv1823129,nssv1823114,nssv1823108,nssv1823045,nssv1823088,nssv1823054,nssv1823127,nssv1823051,nssv1823080,nssv1823055,nssv1823075,nssv1823121,nssv1823101,nssv1823118,nssv1823097,nssv1823043,nssv1823102,nssv1823037,nssv1823062,nssv1823046,nssv1823090,nssv1823053,nssv1823130,nssv1823049,nssv1823074,nssv1823052,nssv1823058,nssv1823036,nssv1823099,nssv1823042,nssv1823084,nssv1823117,nssv1823066,nssv1823041,nssv1823060,nssv1823119,nssv1823089,nssv1823126,nssv1823061,nssv1823077,nssv1823105,nssv1823103,nssv1823070,nssv1823093,nssv1823096,nssv1823111,nssv1823092,nssv1823082,nssv1823098,nssv1823086,nssv1823110,nssv1823073,nssv1823100,nssv1823035,nssv1823107,nssv1823078,nssv1823068,nssv1823072,nssv1823104,nssv1823065,nssv1823124,nssv1823125,nssv1823083,nssv1823131 M 97 10 0 ABCB10 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv827130 1 227719352 227720637 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431871 M 31 1 0 ABCB10 AK20 esv28834 1 227760415 227761345 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19220 M 40 0 1 ABCB10 NA18508 nsv945362 1 227767230 227775364 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824140,nssv1823169,nssv1823160,nssv1823172,nssv1824133,nssv1824152,nssv1823138,nssv1823159,nssv1824134,nssv1824113,nssv1824139,nssv1823132,nssv1824136,nssv1823162,nssv1823156,nssv1824130,nssv1823142,nssv1824126,nssv1823161,nssv1823173,nssv1823145,nssv1824112,nssv1824141,nssv1824108,nssv1823136,nssv1823180,nssv1823144,nssv1823170,nssv1823141,nssv1823163,nssv1823151,nssv1824148,nssv1823137,nssv1824119,nssv1824137,nssv1823182,nssv1823135,nssv1824146,nssv1823148,nssv1823166,nssv1823152,nssv1824125,nssv1823154,nssv1823178,nssv1823147,nssv1824144,nssv1823140,nssv1824149,nssv1823134,nssv1823176,nssv1823146,nssv1824109,nssv1824135,nssv1824124,nssv1823150,nssv1823155,nssv1823149,nssv1823177,nssv1823143,nssv1824118,nssv1823139,nssv1823164,nssv1824138,nssv1824123,nssv1824142,nssv1824114,nssv1823153,nssv1824116,nssv1823133,nssv1823168,nssv1823158,nssv1824150,nssv1824120,nssv1824143,nssv1824131,nssv1824151,nssv1824147,nssv1823181,nssv1824110,nssv1824128,nssv1823174,nssv1823167,nssv1824132,nssv1823175,nssv1823165,nssv1823171,nssv1823179,nssv1824127,nssv1824122,nssv1824115,nssv1824121,nssv1824129,nssv1824111,nssv1824117,nssv1823183,nssv1824145,nssv1823157 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1750293 1 227789428 227789428 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4354587 M 2 1 0 "" HuRef esv22567 1 227828010 227828728 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21330 M 40 0 1 TAF5L,URB2 NA07045 nsv549301 1 227828037 227828701 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737474,nssv737475,nssv737476,nssv737477 M 17421 3 1 TAF5L,URB2 nsv549302 1 227828433 227834920 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737478 M 17421 0 1 URB2 nsv508698 1 227852691 227905219 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617421,nssv622788 M 4 0 2 URB2 CHM,NA18994 nsv4799 1 227866306 227897812 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv585,nssv3820,nssv10510 M 9 0 3 "" NA12878,NA18956,NA19240 nsv8891 1 227874674 227889647 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23695,nssv21080,nssv25187,nssv27025,nssv26847,nssv25180,nssv21415 M 31 0 7 "" NA10839,NA18564,NA18572,NA18853,NA18975,NA18980,NA19240 nsv1007555 1 227876526 227893931 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705523 M 29084 1 0 "" esv2643721 1 227878348 227887895 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5172877 M 1 0 1 "" NA18507 dgv6n50 1 227878463 227888902 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nsv511139,nsv511739 M 1 0 1 "" 1 dgv842n54 1 227878612 227887206 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549309,nsv549303,nsv549308,nsv549307,nsv549314,nsv549315,nsv549316 M 17421 0 208 "" nsv436315 1 227878654 227887386 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465879 M 2 0 1 "" NA18505 nsv819423 1 227878853 227886237 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419824 M 2 0 1 "" AK1 esv5724 1 227878975 227887723 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28165 M 1 0 0 "" esv1924374 1 227878979 227887643 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4842082 M 1 0 1 "" NA18507 dgv107n67 1 227879006 227883005 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827164,nsv827153,nsv827142,nsv827175 M 31 0 18 "" AK10,AK12,AK2,AK20,AK4,AK6,NA18526,NA18542,NA18552,NA18564,NA18566,NA18570,NA18947,NA18951,NA18969,NA18972,NA18973,NA18999 esv27308 1 227879149 227896400 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20986,esv10730 M 40 0 15 "" NA11894,NA12004,NA12239,NA12287,NA12414,NA12878,NA18502,NA18505,NA18858,NA18861,NA19114,NA19190,NA19225,NA19240,NA19257 nsv498711 1 227879156 227887464 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585427 M 9 0 1 "" nsv160940 1 227879161 227887463 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179518 M 24 "" nsv514047 1 227879296 227882848 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2854376,nssv2855977,nssv2855875,nssv2855989,nssv2854395,nssv2856003,nssv2854386,nssv2855958,nssv2854340,nssv2856012,nssv2857884,nssv2855953,nssv2855891,nssv2855945,nssv2854385,nssv2855923,nssv2855877,nssv2855930,nssv2854368,nssv2855936,nssv2855896,nssv2855951,nssv2854370,nssv2855938,nssv2854397,nssv2855931,nssv2855909,nssv2855950,nssv2855885,nssv2855955,nssv2854394,nssv2855965,nssv2855899,nssv2856002,nssv2854383,nssv2855949,nssv2854369,nssv2855920,nssv2854331,nssv2855993,nssv2855903,nssv2855940,nssv2854388,nssv2856013,nssv2854356,nssv2855992,nssv2855881,nssv2855921,nssv2854398,nssv2856011,nssv2854396,nssv2855957,nssv2855910,nssv2855934,nssv2854359,nssv2855922,nssv2855912,nssv2855939,nssv2854362,nssv2855976,nssv2854352,nssv2855996,nssv2854348,nssv2855959,nssv2855919,nssv2855974,nssv2855878,nssv2855998,nssv2855905,nssv2855963,nssv2854347,nssv2855927,nssv2855913,nssv2855990,nssv2855916,nssv2855933,nssv2854339,nssv2855988,nssv2854363,nssv2856014,nssv2855907,nssv2856001,nssv2854390,nssv2856008,nssv2854342,nssv2855942,nssv2855889,nssv2855956,nssv2855888,nssv2855941,nssv2855902,nssv2856004,nssv2855882,nssv2855980,nssv2854353,nssv2856017,nssv2855894,nssv2855932,nssv2854378,nssv2855970,nssv2854374,nssv2855969,nssv2855901,nssv2855924,nssv2854358,nssv2855943,nssv2854337,nssv2855928,nssv2855914,nssv2855995,nssv2855880,nssv2856016,nssv2854391,nssv2855925,nssv2855897,nssv2855947,nssv2854335,nssv2855967,nssv2855918,nssv2856010,nssv2854364,nssv2855987,nssv2854382,nssv2855948,nssv2854333,nssv2855973,nssv2854355,nssv2855978,nssv2854373,nssv2856006,nssv2854367,nssv2855972,nssv2854338,nssv2855952,nssv2854360,nssv2855966,nssv2854387,nssv2855946,nssv2855883,nssv2855979,nssv2854361,nssv2855975,nssv2854379,nssv2855999,nssv2855915,nssv2855985,nssv2854380,nssv2855962,nssv2854377,nssv2855954,nssv2855886,nssv2856015,nssv2855895,nssv2855983,nssv2854372,nssv2856009,nssv2854350,nssv2855986,nssv2855879,nssv2855926,nssv2855911,nssv2855968,nssv2855898,nssv2855960,nssv2854341,nssv2856005,nssv2854365,nssv2855971,nssv2854349,nssv2855961,nssv2855900,nssv2855984,nssv2855887,nssv2855994,nssv2855884,nssv2855991,nssv2854343,nssv2855964,nssv2854344,nssv2855982,nssv2854389,nssv2856007,nssv2855893,nssv2855929,nssv2854346,nssv2855981,nssv2854336,nssv2855944,nssv2854334,nssv2855997,nssv2854375,nssv2855937,nssv2854366,nssv2855935,nssv2854371,nssv2856000,nssv2855908,nssv2854392,nssv2854345,nssv2854357,nssv2854384,nssv2854354,nssv2854332,nssv2855904,nssv2855906,nssv2855892,nssv2855876,nssv2854381,nssv2855890,nssv2855917,nssv2854351,nssv2854393 M 2366 0 212 "" NA06986,NA06989,NA06991,NA06995,NA07034,NA07051,NA07347,NA07348,NA07357,NA07435,NA10830,NA10835,NA10839,NA10846,NA10850,NA10856,NA10857,NA10859,NA10863,NA11829,NA11840,NA11843,NA11882,NA11893,NA11894,NA11919,NA11920,NA11930,NA12044,NA12058,NA12144,NA12145,NA12154,NA12234,NA12236,NA12239,NA12249,NA12275,NA12282,NA12287,NA12340,NA12344,NA12347,NA12386,NA12400,NA12414,NA12485,NA12717,NA12748,NA12763,NA12766,NA12767,NA12775,NA12778,NA12814,NA12815,NA12832,NA12842,NA12873,NA12874,NA12878,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18501,NA18503,NA18504,NA18506,NA18507,NA18516,NA18518,NA18519,NA18522,NA18532,NA18542,NA18545,NA18552,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18572,NA18576,NA18577,NA18593,NA18594,NA18609,NA18611,NA18621,NA18622,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18855,NA18857,NA18861,NA18863,NA18867,NA18870,NA18872,NA18874,NA18924,NA18933,NA18934,NA18935,NA18947,NA18948,NA18952,NA18956,NA18959,NA18960,NA18961,NA18967,NA18969,NA18970,NA18971,NA18973,NA18974,NA18975,NA18980,NA18987,NA18991,NA18994,NA18998,NA18999,NA19000,NA19003,NA19005,NA19012,NA19093,NA19094,NA19098,NA19100,NA19102,NA19103,NA19113,NA19114,NA19115,NA19117,NA19118,NA19122,NA19123,NA19130,NA19137,NA19149,NA19151,NA19172,NA19174,NA19175,NA19177,NA19178,NA19180,NA19189,NA19190,NA19191,NA19192,NA19194,NA19198,NA19199,NA19206,NA19208,NA19210,NA19211,NA19223,NA19225,NA19240,NA19247,NA19257,NA21307,NA21310,NA21312,NA21317,NA21360,NA21361,NA21363,NA21381,NA21382,NA21386,NA21423,NA21425,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21475,NA21476,NA21489,NA21490,NA21522,NA21524,NA21580,NA21599,NA21600,NA21601,NA21634,NA21716,NA21718 dgv843n54 1 227880074 227882854 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549304,nsv549312 M 17421 0 4 "" dgv844n54 1 227880074 227884368 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549305,nsv549306,nsv549313 M 17421 0 7 "" nsv549310 1 227880074 227888902 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737685 M 17421 0 1 "" nsv549311 1 227880634 227881339 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737686 M 17421 0 1 "" dgv845n54 1 227882163 227887206 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549317,nsv549319,nsv549318 M 17421 0 57 "" esv2421933 1 227883479 227886819 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5140678,essv5123592,essv5092823,essv5086116,essv5070616,essv5101863,essv5114251,essv5145209,essv5029458,essv5098796,essv5057026,essv5001985,essv5125587,essv5121349,essv5068062,essv5086412,essv5131483,essv5016493,essv5147492,essv5111927,essv5022079,essv5153931,essv5018494,essv5158181,essv5004065,essv5083837,essv5127125,essv5153817,essv5082728,essv5062813,essv5139030,essv5123763,essv5047292,essv5094813,essv5102473,essv5133084,essv5107299,essv5021555,essv5074727,essv5124426,essv5011858,essv5121161,essv5085803,essv5006439,essv5132300,essv5033798,essv5016756,essv5033413,essv5016513,essv5076566,essv5083802,essv5033957,essv5050876,essv5034171,essv5132355,essv5040418,essv5094619,essv5133362,essv5149225,essv5004518,essv5011735,essv5086822,essv5018606,essv5072223,essv5039158,essv5138868,essv5135490,essv5053517,essv5061149,essv5147959,essv5119900,essv5141142,essv5160335,essv5152837,essv5035853,essv5085305,essv5140369,essv5045869,essv5080244,essv5079434,essv5053478,essv5104927,essv5105139,essv5155181,essv5152126,essv5011530,essv5033296,essv5135226,essv5141877,essv5122275,essv5078285,essv5026116,essv5078484,essv5033079,essv5087555,essv5153903,essv5098625,essv5076167,essv5119166,essv5070271,essv5107732,essv5054770,essv5065086,essv5101734,essv5010394,essv5098675,essv5150344,essv5121954,essv5136335,essv5137099,essv5065755,essv5132701,essv5068799,essv5112068,essv5104362,essv5155453,essv5140681,essv5148198,essv5120912,essv5072056,essv5101258,essv5062419,essv5027078,essv5044313,essv5117878,essv5096058,essv5017004,essv5024415,essv5082592,essv5129317,essv5105823,essv5050477,essv5015635,essv5143899,essv5161194,essv5053731,essv5070776,essv5041153,essv5066202,essv5123396,essv5055480,essv5041942,essv5005294,essv5038146,essv5013014,essv5121393,essv5045263,essv5090127,essv5053209,essv5112816,essv5011162,essv5155569,essv5008841,essv5027361,essv5148973,essv5018327,essv5128249,essv5037351,essv5037270,essv5005731,essv5092017,essv5004899,essv5052138,essv5065695,essv5097915,essv5145807,essv5007249,essv5147326,essv5008553,essv5132734,essv5157251,essv5052135,essv5114544,essv5094654,essv5109952,essv5097688,essv5078163,essv5065027,essv5129709,essv5064778,essv5007652,essv5060828,essv5072733,essv5109744,essv5066808,essv5054024,essv5102072,essv5021787,essv5092693,essv5156249,essv5058596,essv5079259,essv5017473,essv5039720,essv5129915,essv5073306,essv5076019,essv5080532,essv5124249,essv5066778,essv5119378,essv5093261,essv5109023,essv5057840,essv5043694,essv5037311,essv5076376,essv5136185,essv5114592,essv5083012,essv5099461,essv5069287,essv5145034,essv5127036,essv5082562,essv5106388,essv5113786,essv5039323,essv5047825,essv5132215,essv5025718,essv5133697,essv5055626,essv5056164,essv5061613,essv5018586,essv5029273,essv5029742,essv5159737,essv5004964,essv5144401,essv5134671,essv5096371,essv5081035,essv5073447,essv5055651,essv5157718,essv5092404,essv5028480,essv5116894,essv5026249,essv5068162,essv5078341,essv5052921,essv5099994,essv5148520,essv5139079,essv5067501,essv5082890,essv5156761,essv5140656,essv5073954,essv5146266,essv5023322,essv5037633,essv5102170,essv5082278,essv5073321,essv5094879,essv5139238,essv5092863,essv5139548,essv5068714,essv5138463,essv5125310,essv5123630,essv5044774,essv5073452,essv5092351,essv5033565,essv5122782,essv5104462,essv5023029,essv5089597,essv5029595,essv5036845,essv5132037,essv5132184,essv5158534,essv5140649,essv5065372,essv5117923,essv5133265,essv5057470,essv5104423,essv5057774,essv5132943,essv5061566,essv5090712,essv5130868,essv5143478,essv5037237,essv5120774,essv5077278,essv5077605,essv5049400,essv5149903,essv5085527,essv5090628,essv5038791,essv5157644,essv5019881,essv5144979,essv5021129,essv5015329,essv5070266,essv5018497,essv5143281,essv5064984,essv5154088,essv5095337,essv5071961,essv5136883,essv5105954,essv5080600,essv5114576,essv5091380,essv5025897,essv5046765,essv5119884,essv5006201,essv5037857,essv5143164,essv5026763,essv5119161,essv5154654,essv5111089,essv5137424,essv5017464,essv5015218,essv5084262,essv5012205,essv5096137,essv5038376,essv5126170,essv5045589,essv5091236,essv5041159,essv5133155,essv5047650,essv5020802,essv5109819,essv5080767,essv5149834,essv5146456,essv5050150,essv5062098,essv5082213,essv5018140,essv5154697,essv5107413,essv5098128,essv5090054,essv5010683,essv5030405,essv5159722,essv5112087,essv5059737,essv5087175,essv5068263,essv5081786,essv5013194,essv5059548,essv5088656,essv5160468,essv5087937,essv5090783,essv5031115,essv5075831,essv5016405,essv5138187,essv5039670,essv5035063,essv5078643,essv5147784,essv5038696,essv5030392,essv5069303,essv5018262,essv5074630,essv5099843,essv5057927,essv5066287,essv5078965,essv5059983,essv5048888,essv5013984,essv5031386,essv5159665,essv5084741,essv5049031,essv5025459,essv5127530,essv5132471,essv5045053,essv5101546,essv5073889,essv5138424,essv5005506,essv5030462,essv5156401,essv5147597,essv5030921,essv5054187,essv5139962,essv5002439,essv5115791,essv5145885,essv5109343,essv5089666,essv5110162,essv5152174,essv5077799,essv5142286,essv5084270,essv5059081,essv5150200,essv5057371,essv5040066,essv5037769,essv5146820,essv5058451,essv5159798,essv5151990,essv5069296,essv5023661,essv5038940,essv5015118,essv5103463,essv5058302,essv5030984,essv5118822,essv5014652,essv5084054,essv5053188,essv5007614,essv5006808,essv5081220,essv5156897,essv5108407,essv5080881,essv5038770,essv5118908,essv5151144,essv5120845,essv5141830,essv5034125,essv5046883,essv5076117,essv5154185,essv5095875,essv5151257,essv5022599,essv5067150,essv5052485,essv5030530,essv5013976,essv5074272,essv5114777,essv5077142,essv5131734,essv5046788,essv5071707,essv5095278,essv5015594,essv5083523,essv5057502,essv5065066,essv5119750,essv5015386,essv5136103,essv5048336,essv5089965,essv5140331,essv5038669,essv5059971,essv5152535,essv5049152,essv5008034,essv5007322,essv5053830,essv5033734,essv5076853,essv5018008,essv5061828,essv5023615,essv5023474,essv5083601,essv5076696,essv5090251,essv5033861,essv5159412,essv5076427,essv5131327,essv5112983,essv5010962,essv5010571,essv5150620,essv5088782,essv5153726,essv5016894,essv5035844,essv5050768,essv5085725,essv5006716,essv5160426,essv5016169,essv5130888,essv5085517,essv5140662,essv5005826,essv5081365,essv5132731,essv5017812 M 1184 0 514 "" NA06986,NA06989,NA06995,NA07051,NA07347,NA07357,NA10830,NA10835,NA10839,NA10846,NA10854,NA10856,NA10859,NA10863,NA11829,NA11840,NA11882,NA11891,NA11894,NA11919,NA11920,NA11930,NA12005,NA12044,NA12144,NA12145,NA12154,NA12234,NA12239,NA12249,NA12275,NA12287,NA12340,NA12344,NA12347,NA12386,NA12400,NA12739,NA12748,NA12762,NA12763,NA12766,NA12767,NA12775,NA12778,NA12814,NA12815,NA12832,NA12842,NA12865,NA12874,NA12878,NA12891,NA12892,NA17965,NA17967,NA17969,NA17970,NA17972,NA17974,NA17975,NA17976,NA17977,NA17981,NA17982,NA17983,NA17986,NA17987,NA17993,NA17995,NA17996,NA17998,NA17999,NA18101,NA18102,NA18105,NA18106,NA18112,NA18120,NA18127,NA18129,NA18132,NA18133,NA18134,NA18135,NA18136,NA18138,NA18139,NA18141,NA18143,NA18144,NA18147,NA18148,NA18149,NA18150,NA18152,NA18153,NA18154,NA18156,NA18157,NA18159,NA18160,NA18161,NA18162,NA18166,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18501,NA18503,NA18504,NA18505,NA18506,NA18507,NA18516,NA18518,NA18519,NA18524,NA18526,NA18529,NA18532,NA18534,NA18542,NA18543,NA18545,NA18546,NA18552,NA18557,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18572,NA18576,NA18577,NA18593,NA18594,NA18596,NA18599,NA18609,NA18611,NA18615,NA18616,NA18617,NA18619,NA18621,NA18622,NA18623,NA18627,NA18630,NA18632,NA18633,NA18634,NA18636,NA18637,NA18638,NA18639,NA18640,NA18641,NA18642,NA18643,NA18647,NA18685,NA18689,NA18694,NA18702,NA18704,NA18740,NA18745,NA18749,NA18757,NA18853,NA18855,NA18857,NA18861,NA18863,NA18870,NA18872,NA18874,NA18912,NA18914,NA18924,NA18933,NA18934,NA18935,NA18947,NA18948,NA18951,NA18952,NA18954,NA18956,NA18959,NA18960,NA18961,NA18967,NA18969,NA18970,NA18971,NA18973,NA18975,NA18976,NA18979,NA18980,NA18987,NA18991,NA18993,NA18994,NA18998,NA18999,NA19000,NA19001,NA19005,NA19036,NA19041,NA19046,NA19055,NA19057,NA19059,NA19060,NA19062,NA19063,NA19064,NA19065,NA19067,NA19068,NA19072,NA19074,NA19077,NA19078,NA19079,NA19080,NA19083,NA19087,NA19088,NA19093,NA19094,NA19098,NA19102,NA19103,NA19113,NA19114,NA19115,NA19117,NA19118,NA19122,NA19123,NA19130,NA19137,NA19149,NA19151,NA19174,NA19175,NA19176,NA19178,NA19180,NA19189,NA19190,NA19191,NA19192,NA19194,NA19198,NA19199,NA19206,NA19208,NA19210,NA19211,NA19213,NA19222,NA19223,NA19225,NA19226,NA19238,NA19240,NA19247,NA19257,NA19309,NA19311,NA19317,NA19324,NA19332,NA19360,NA19379,NA19380,NA19396,NA19397,NA19429,NA19435,NA19436,NA19440,NA19451,NA19455,NA19463,NA19468,NA19625,NA19649,NA19650,NA19652,NA19660,NA19664,NA19665,NA19670,NA19675,NA19676,NA19677,NA19678,NA19680,NA19681,NA19682,NA19683,NA19700,NA19701,NA19708,NA19718,NA19725,NA19726,NA19727,NA19747,NA19749,NA19751,NA19756,NA19761,NA19773,NA19774,NA19777,NA19778,NA19779,NA19781,NA19782,NA19834,NA19904,NA19916,NA19918,NA19921,NA20127,NA20128,NA20129,NA20277,NA20284,NA20291,NA20292,NA20294,NA20297,NA20317,NA20319,NA20335,NA20344,NA20346,NA20347,NA20359,NA20360,NA20502,NA20504,NA20505,NA20508,NA20512,NA20522,NA20525,NA20529,NA20530,NA20531,NA20534,NA20535,NA20538,NA20540,NA20541,NA20542,NA20589,NA20752,NA20756,NA20759,NA20760,NA20761,NA20766,NA20768,NA20769,NA20770,NA20773,NA20775,NA20778,NA20783,NA20785,NA20786,NA20790,NA20792,NA20801,NA20803,NA20804,NA20806,NA20811,NA20813,NA20818,NA20819,NA20845,NA20846,NA20847,NA20849,NA20850,NA20853,NA20854,NA20856,NA20858,NA20859,NA20861,NA20866,NA20869,NA20871,NA20872,NA20881,NA20883,NA20884,NA20885,NA20887,NA20888,NA20889,NA20890,NA20892,NA20895,NA20896,NA20899,NA20901,NA20902,NA20904,NA20909,NA20910,NA21086,NA21090,NA21094,NA21097,NA21098,NA21100,NA21101,NA21102,NA21104,NA21106,NA21107,NA21108,NA21109,NA21112,NA21113,NA21117,NA21118,NA21119,NA21123,NA21125,NA21137,NA21141,NA21142,NA21143,NA21144,NA21297,NA21307,NA21311,NA21312,NA21314,NA21317,NA21333,NA21355,NA21360,NA21361,NA21363,NA21367,NA21368,NA21370,NA21371,NA21381,NA21382,NA21385,NA21386,NA21405,NA21415,NA21425,NA21436,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21457,NA21475,NA21476,NA21489,NA21490,NA21520,NA21521,NA21522,NA21524,NA21573,NA21577,NA21578,NA21580,NA21599,NA21600,NA21601,NA21613,NA21619,NA21634,NA21647,NA21678,NA21683,NA21685,NA21689,NA21722,NA21739,NA21740,NA21741 nsv442599 1 227883479 227886819 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619819,nssv1619733,nssv1619763,nssv1619708,nssv1619762,nssv1619752,nssv1619805,nssv1619777,nssv1619828,nssv1619797,nssv1619779,nssv1619800,nssv1619829,nssv1619769,nssv1619710,nssv1619721,nssv1619785,nssv1619793,nssv1619744,nssv1619732,nssv1619712,nssv1619756,nssv1619765,nssv1619728,nssv1619707,nssv1619790,nssv1619725,nssv1619729,nssv1619794,nssv1619822,nssv1619792,nssv1619784,nssv1619757,nssv1619815,nssv1619759,nssv1619740,nssv1619825,nssv1619754,nssv1619823,nssv1619748,nssv1619827,nssv1619783,nssv1619767,nssv1619746,nssv1619741,nssv1619808,nssv1619751,nssv1619753,nssv1619806,nssv1619768,nssv1619731,nssv1619738,nssv1619743,nssv1619789,nssv1619723,nssv1619799,nssv1619771,nssv1619807,nssv1619816,nssv1619714,nssv1619747,nssv1619812,nssv1619719,nssv1619804,nssv1619818,nssv1619736,nssv1619787,nssv1619727,nssv1619830,nssv1619735,nssv1619826,nssv1619795,nssv1619737,nssv1619809,nssv1619788,nssv1619734,nssv1619718,nssv1619730,nssv1619796,nssv1619803,nssv1619745,nssv1619715,nssv1619742,nssv1619760,nssv1619811,nssv1619817,nssv1619778,nssv1619801,nssv1619798,nssv1619814,nssv1619770,nssv1619780,nssv1619820,nssv1619755,nssv1619821,nssv1619726,nssv1619716,nssv1619709,nssv1619764,nssv1619772,nssv1619774,nssv1619791,nssv1619766,nssv1619776,nssv1619739,nssv1619781,nssv1619802,nssv1619758,nssv1619782,nssv1619775,nssv1619786,nssv1619824,nssv1619720,nssv1619717,nssv1619711,nssv1619713,nssv1619773,nssv1619750,nssv1619810,nssv1619722,nssv1619761,nssv1619749,nssv1619724,nssv1619813 M 270 0 124 "" NA07034,NA07357,NA10830,NA10835,NA10839,NA10846,NA10854,NA10856,NA10857,NA10859,NA10863,NA11829,NA11840,NA11882,NA12005,NA12044,NA12144,NA12145,NA12154,NA12234,NA12236,NA12239,NA12249,NA12762,NA12763,NA12814,NA12815,NA12865,NA12873,NA12874,NA12878,NA12891,NA12892,NA18501,NA18502,NA18503,NA18504,NA18505,NA18506,NA18507,NA18516,NA18521,NA18522,NA18524,NA18526,NA18529,NA18532,NA18542,NA18545,NA18552,NA18561,NA18562,NA18563,NA18564,NA18566,NA18570,NA18572,NA18576,NA18577,NA18593,NA18594,NA18609,NA18611,NA18621,NA18622,NA18623,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18855,NA18857,NA18858,NA18861,NA18863,NA18870,NA18872,NA18912,NA18914,NA18947,NA18948,NA18951,NA18952,NA18956,NA18959,NA18960,NA18961,NA18967,NA18969,NA18970,NA18971,NA18973,NA18975,NA18976,NA18980,NA18987,NA18991,NA18994,NA18998,NA18999,NA19000,NA19003,NA19005,NA19012,NA19093,NA19094,NA19098,NA19100,NA19102,NA19103,NA19130,NA19137,NA19192,NA19194,NA19206,NA19208,NA19210,NA19211,NA19222,NA19223,NA19238,NA19240 nsv523763 1 227888902 227891674 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699584 M 2026 0 1 "" nsv438148 1 227888902 227894006 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469951,nssv469940 M 269 0 2 "" NA10838,NA12004 nsv945363 1 227889921 227891661 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824155,nssv1824208,nssv1824162,nssv1824223,nssv1824237,nssv1824214,nssv1824166,nssv1824189,nssv1824175,nssv1824228,nssv1824174,nssv1824242,nssv1824235,nssv1824176,nssv1824154,nssv1824227,nssv1824156,nssv1824216,nssv1824182,nssv1824246,nssv1824181,nssv1824190,nssv1824236,nssv1824213,nssv1824233,nssv1824184,nssv1824168,nssv1824206,nssv1824232,nssv1824210,nssv1824231,nssv1824200,nssv1824177,nssv1824209,nssv1824160,nssv1824241,nssv1824158,nssv1824222,nssv1824157,nssv1824249,nssv1824234,nssv1824245,nssv1824169,nssv1824186,nssv1824164,nssv1824153,nssv1824239,nssv1824205,nssv1824163,nssv1824243,nssv1824161,nssv1824211,nssv1824230,nssv1824194,nssv1824173,nssv1824196,nssv1824171,nssv1824197,nssv1824170,nssv1824204,nssv1824172,nssv1824192,nssv1824159,nssv1824179,nssv1824165,nssv1824221,nssv1824238,nssv1824220,nssv1824167,nssv1824247,nssv1824187,nssv1824215,nssv1824199,nssv1824244,nssv1824203,nssv1824185,nssv1824240,nssv1824248,nssv1824217,nssv1824225,nssv1824219,nssv1824178,nssv1824180,nssv1824229,nssv1824191,nssv1824188,nssv1824224,nssv1824193,nssv1824198,nssv1824212,nssv1824195,nssv1824183,nssv1824202,nssv1824201,nssv1824226,nssv1824218,nssv1824207 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945364 1 227907262 227911397 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824258,nssv1824320,nssv1824263,nssv1824304,nssv1824278,nssv1824275,nssv1823196,nssv1824280,nssv1824262,nssv1824288,nssv1824272,nssv1823202,nssv1824331,nssv1824276,nssv1824253,nssv1823203,nssv1823198,nssv1824287,nssv1824327,nssv1824305,nssv1824254,nssv1824293,nssv1824256,nssv1824297,nssv1824259,nssv1824315,nssv1824330,nssv1824273,nssv1824329,nssv1824313,nssv1824271,nssv1824324,nssv1824252,nssv1824311,nssv1824257,nssv1823206,nssv1824274,nssv1824283,nssv1824265,nssv1824295,nssv1824328,nssv1824281,nssv1824255,nssv1823201,nssv1824261,nssv1824290,nssv1824251,nssv1824307,nssv1823195,nssv1823209,nssv1824266,nssv1824319,nssv1824260,nssv1824302,nssv1823199,nssv1824294,nssv1824270,nssv1824250,nssv1824279,nssv1824306,nssv1824268,nssv1824303,nssv1824267,nssv1823200,nssv1823197,nssv1823207,nssv1824269,nssv1824314,nssv1824264,nssv1823205,nssv1824298,nssv1824323,nssv1824301,nssv1824296,nssv1823208,nssv1824310,nssv1824300,nssv1824286,nssv1824325,nssv1824289,nssv1824282,nssv1824317,nssv1824318,nssv1824312,nssv1823204,nssv1824322,nssv1824284,nssv1824292,nssv1824308,nssv1824285,nssv1824277,nssv1824291,nssv1824321,nssv1824299,nssv1824316,nssv1824309,nssv1824326 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3330385 1 227990052 227990850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692160 M 185 1 0 "" NA19240 nsv1012016 1 228021992 228100602 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492187 M 29084 0 1 "" esv2488766 1 228072833 228073713 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5299492 M 1 1 0 "" NA18507 nsv1003230 1 228082408 228234193 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488211 M 29084 0 1 "" esv2576101 1 228101511 228102908 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5249406 M 1 0 1 "" NA18507 esv2577312 1 228173949 228174974 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5260339 M 1 1 0 "" NA18507 esv3302666 1 228174231 228174408 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731034,essv7731594,essv7731179,essv7731255,essv7731487 M 185 5 0 "" NA12878,NA12891,NA12892,NA19239,NA19240 esv3376151 1 228174242 228174417 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670875,essv8670878,essv8670876,essv8670873,essv8670877 M 185 5 0 "" NA12878,NA12891,NA12892,NA19239,NA19240 esv3406394 1 228174408 228174408 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653232,essv8653231,essv8653229 M 185 3 0 "" NA19238,NA19239,NA19240 esv1010662 1 228197932 228207100 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563570 M 3 0 1 "" HuRef nsv511143 1 228198206 228201384 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625488 M 1 0 1 "" 1 esv2475640 1 228198523 228201039 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5362290 M 1 0 1 "" NA18507 esv2057263 1 228199087 228200586 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4874439 M 1 0 1 "" NA18507 nsv511740 1 228199131 228200754 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626385 M 1 0 1 "" 1 esv26332 1 228199470 228200805 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18434 M 40 0 6 "" NA12156,NA18508,NA18907,NA19108,NA19190,NA19257 nsv549320 1 228199497 228199939 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737775,nssv737776,nssv737786,nssv737785,nssv737764,nssv737761,nssv737763,nssv737762,nssv737766,nssv737772,nssv737774,nssv737765,nssv737770,nssv737768,nssv737769,nssv737767,nssv737781,nssv737784,nssv737779,nssv737780,nssv737778,nssv737771,nssv737777,nssv737782,nssv737787,nssv737783,nssv737789,nssv737788,nssv737792,nssv737790,nssv737791,nssv737773,nssv737760,nssv737759,nssv737758,nssv737757 M 17421 0 36 "" dgv846n54 1 228199497 228200253 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549327,nsv549321,nsv549322 M 17421 0 5 "" dgv847n54 1 228199497 228200506 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549330,nsv549329,nsv549325,nsv549324,nsv549323 M 17421 0 32 "" nsv549326 1 228199497 228201384 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737824 M 17421 0 1 "" nsv549328 1 228199548 228200402 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737826 M 17421 1 0 "" dgv848n54 1 228199757 228200506 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549333,nsv549332,nsv549331 M 17421 0 5 "" nsv832814 1 228205983 228402005 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441695 M 95 1 0 GALNT2 esv275327 1 228257641 228271161 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585140,essv2585233 M 1250 1 1 GALNT2 nsv528956 1 228314187 228330582 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705652 M 2026 0 1 GALNT2 esv3891204 1 228314187 228333832 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785155 M 3017 0 1 GALNT2 nsv832825 1 228338069 228505163 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441697 M 95 0 1 GALNT2 nsv473679 1 228447483 228447483 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020068 M 9 1 0 GALNT2 NA19129 nsv827186 1 228475244 228475980 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437271 M 31 0 1 GALNT2 NA18949 nsv518223 1 228476785 228483917 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695647 M 2026 0 1 GALNT2 nsv520656 1 228481916 228482841 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697540 M 2026 0 1 GALNT2 nsv516432 1 228482661 228483917 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv668326,nssv694339,nssv683156,nssv661344,nssv672780,nssv655622 M 2026 0 6 GALNT2 nsv526554 1 228488654 228490104 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702868 M 2026 0 1 "" esv2225956 1 228494667 228495090 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4691771 M 1 0 1 "" NA18507 nsv468327 1 228502361 228506880 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543450 M 1557 0 1 "" HGDP01081 nsv519157 1 228502361 228506880 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696635 M 2026 0 1 "" nsv549334 1 228502361 228506880 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174054 M 17421 0 1 "" HGDP01081 nsv470781 1 228502361 228510401 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544420,nssv544419 M 443 0 2 "" HGDP00449,HGDP01081 esv1919607 1 228517521 228518015 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4539348 M 1 0 1 "" NA18507 esv3427526 1 228534029 228534044 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863827 M 185 1 0 PGBD5 NA12005 esv2587431 1 228534283 228534643 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5315872 M 1 1 0 PGBD5 NA18507 esv3451220 1 228534363 228534481 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652065 M 185 1 0 PGBD5 NA19240 esv3347635 1 228560904 228560924 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673941 M 185 1 0 PGBD5 NA19239 esv3308402 1 228560910 228560911 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838917,essv7837234,essv7837108 M 185 3 0 PGBD5 NA19238,NA19239,NA19240 esv28174 1 228568676 228589684 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20963 M 40 3 0 PGBD5 NA11993,NA18523,NA19257 esv24937 1 228596610 228599831 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18049 M 40 1 0 PGBD5 NA18916 esv2296334 1 228598423 228598839 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4626814 M 1 0 1 PGBD5 NA18507 esv23377 1 228627962 228629048 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12808 M 40 0 1 PGBD5 NA07045 esv2421558 1 228646927 228654748 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5115876,essv5050965,essv5144599,essv5063501,essv5035038,essv5083241,essv5057468,essv5087979,essv5022586,essv5097371,essv5143173,essv5027847,essv5137281,essv5014141,essv5152548,essv5063245,essv5108247,essv5046051,essv5045657,essv5067511,essv5104720,essv5150158,essv5030360,essv5060328,essv5044652,essv5142622,essv5064973,essv5044922,essv5059128,essv5117136,essv5099417,essv5135055,essv5027883,essv5008335,essv5022851,essv5152290,essv5012707,essv5064845,essv5146615 M 1184 0 39 "" NA18857,NA19036,NA19159,NA19161,NA19221,NA19223,NA19247,NA19249,NA19347,NA19352,NA19376,NA19384,NA19394,NA19436,NA19439,NA19451,NA19466,NA19708,NA20317,NA20344,NA20359,NA20582,NA21320,NA21352,NA21357,NA21365,NA21366,NA21368,NA21390,NA21414,NA21441,NA21442,NA21509,NA21523,NA21619,NA21650,NA21678,NA21723,NA21733 esv274876 1 228670433 228680733 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585557 M 1250 0 1 "" nsv4810 1 228678072 228711596 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3829 M 9 1 0 "" NA12878 nsv508064 1 228680770 228686770 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618523 M 4 0 0 "" CHM nsv527891 1 228721990 228734873 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704394 M 2026 1 0 "" esv1054652 1 228768878 228768878 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3725907 M 2 1 0 "" HuRef esv32952 1 228779487 228782225 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv93924,essv92802,essv100182,essv94615,essv96814,essv96431,essv99137 M 51 7 0 "" 21634,21659,21932,21944,22261,22275,22286 nsv160269 1 228791153 228791153 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178847 M 24 "" esv1582763 1 228791248 228791248 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3758744 M 2 1 0 "" HuRef esv3325119 1 228798270 228798302 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863828 M 185 1 0 "" NA12005 dgv27n21 1 228812517 228816269 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv522630,nsv527218 M 2026 0 2 "" nsv472983 1 228872147 228872147 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013496 M 9 1 0 COG2 NA19129 esv3444074 1 228886104 228886114 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863829 M 185 1 0 COG2 NA12005 nsv524949 1 228888107 228888383 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700967 M 2026 0 1 COG2 nsv832836 1 228895697 229034632 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441698 M 95 0 1 AGT,CAPN9,COG2 nsv549335 1 228936173 228999730 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv737837 M 17421 1 0 CAPN9 nsv1010882 1 228988554 229051276 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493339 M 29084 1 0 C1orf198,CAPN9 nsv1000488 1 229002027 229472104 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500543 M 29084 1 0 ARV1,C1orf131,C1orf198,CAPN9,FAM89A,GNPAT,LOC149373,MIR1182,TRIM67,TTC13 nsv1011066 1 229142801 229445219 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494295 M 29084 1 0 ARV1,C1orf131,FAM89A,GNPAT,LOC149373,MIR1182,TRIM67,TTC13 esv2459424 1 229213146 229214024 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5330861 M 1 1 0 "" NA18507 nsv945366 1 229224734 229226331 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823275,nssv1823244,nssv1823338,nssv1823264,nssv1823307,nssv1823321,nssv1823282,nssv1823325,nssv1823274,nssv1823250,nssv1823293,nssv1823324,nssv1823305,nssv1823252,nssv1823242,nssv1823258,nssv1823298,nssv1823322,nssv1823265,nssv1823266,nssv1823281,nssv1823253,nssv1823279,nssv1823247,nssv1823292,nssv1823255,nssv1823285,nssv1823319,nssv1823312,nssv1823246,nssv1823331,nssv1823254,nssv1823272,nssv1823323,nssv1823296,nssv1823320,nssv1823280,nssv1823261,nssv1823288,nssv1823262,nssv1823273,nssv1823328,nssv1823316,nssv1823251,nssv1823301,nssv1823326,nssv1823311,nssv1823270,nssv1823332,nssv1823263,nssv1823294,nssv1823257,nssv1823276,nssv1823256,nssv1823295,nssv1823243,nssv1823313,nssv1823260,nssv1823304,nssv1823249,nssv1823283,nssv1823271,nssv1823290,nssv1823259,nssv1823330,nssv1823245,nssv1823286,nssv1823327,nssv1823287,nssv1823248,nssv1823329,nssv1823278,nssv1823302,nssv1823309,nssv1823269,nssv1823291,nssv1823336,nssv1823310,nssv1823300,nssv1823335,nssv1823308,nssv1823334,nssv1823277,nssv1823333,nssv1823306,nssv1823303,nssv1823337,nssv1823297,nssv1823317,nssv1823318,nssv1823268,nssv1823314,nssv1823284,nssv1823267,nssv1823315,nssv1823289,nssv1823299 M 97 10 0 FAM89A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2097594 1 229248063 229248472 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4830798 M 1 0 1 "" NA18507 esv5135 1 229249614 229250128 CNV loss Wang_et_al_2008 18987735 Sequencing essv27576 M 1 0 1 "" YH esv1004661 1 229254791 229254843 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578913 M 3 0 1 "" HuRef nsv945368 1 229311843 229321230 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823423,nssv1823415,nssv1823416,nssv1823411,nssv1823422,nssv1823394,nssv1823342,nssv1823379,nssv1823419,nssv1823387,nssv1823351,nssv1823385,nssv1823363,nssv1823381,nssv1823360,nssv1823412,nssv1823344,nssv1823435,nssv1823417,nssv1823405,nssv1823421,nssv1823402,nssv1823343,nssv1823372,nssv1823352,nssv1823369,nssv1823420,nssv1823395,nssv1823348,nssv1823382,nssv1823340,nssv1823413,nssv1823355,nssv1823393,nssv1823418,nssv1823414,nssv1823341,nssv1823362,nssv1823425,nssv1823404,nssv1823359,nssv1823391,nssv1823361,nssv1823390,nssv1823367,nssv1823389,nssv1823350,nssv1823339,nssv1823347,nssv1823428,nssv1823368,nssv1823378,nssv1823354,nssv1823376,nssv1823349,nssv1823380,nssv1823358,nssv1823398,nssv1823357,nssv1823409,nssv1823424,nssv1823370,nssv1823353,nssv1823373,nssv1823356,nssv1823377,nssv1823346,nssv1823429,nssv1823345,nssv1823410,nssv1823396,nssv1823366,nssv1823392,nssv1823401,nssv1823375,nssv1823427,nssv1823399,nssv1823371,nssv1823383,nssv1823407,nssv1823406,nssv1823408,nssv1823388,nssv1823432,nssv1823364,nssv1823426,nssv1823433,nssv1823397,nssv1823365,nssv1823403,nssv1823431,nssv1823434,nssv1823384,nssv1823374,nssv1823386,nssv1823430,nssv1823400 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2433292 1 229323846 229324913 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5207430 M 1 1 0 "" NA18507 esv1266647 1 229324483 229324483 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3587783 M 2 1 0 "" HuRef esv3374037 1 229349505 229349517 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903428,essv8903427,essv8903423,essv8903422,essv8903424,essv8903426 M 185 6 0 "" NA18499,NA18519,NA18907,NA19093,NA19108,NA19257 esv3305895 1 229349507 229349508 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7755470,essv7742114,essv7750414,essv7761403,essv7749556,essv7763129 M 185 6 0 "" NA18499,NA18519,NA18907,NA19093,NA19108,NA19257 nsv508065 1 229358451 229364451 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621490,nssv622306,nssv624233,nssv618524 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 esv2494270 1 229369283 229370754 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5229293 M 1 0 1 TRIM67 NA18507 esv7591 1 229369505 229370200 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30032 M 1 0 0 TRIM67 esv1972788 1 229369515 229370192 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4686812 M 1 0 1 TRIM67 NA18507 esv2764227 1 229378490 229390654 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007006,essv7007002,essv7007005,essv7007004,essv7007007,essv7007009,essv7007008,essv7007003 M 1109 0 8 LOC149373,TRIM67 RW_0131,RW_0146,RW_0173,RW_0201,RW_0224,RW_0272,RW_0639,RW_0669 nsv517116 1 229385301 229389962 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689495,nssv659411,nssv673075,nssv672883,nssv666987,nssv683876,nssv684344,nssv652884,nssv653811,nssv689029,nssv652647,nssv663273,nssv659733,nssv663936,nssv665817,nssv653381,nssv656768,nssv674401,nssv657975,nssv664842,nssv672611 M 2026 0 21 LOC149373,TRIM67 esv27426 1 229386536 229388661 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18729 M 40 0 3 LOC149373,TRIM67 NA18508,NA18858,NA18907 nsv818833 1 229387089 229388566 CNV loss Wang_et_al_2007 17921354 SNP array nssv1416701,nssv1416702 M 112 0 2 LOC149373,TRIM67 NA19160,NA19161 dgv18n17 1 229387089 229391106 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437268,nsv437267,nsv437270,nsv437271 M 60 0 4 LOC149373,TRIM67 NA18506,NA18860,NA19139,NA19161 esv2555185 1 229404273 229404848 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5256968 M 1 1 0 TRIM67 NA18507 esv3310546 1 229404318 229405032 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843522 M 185 1 0 TRIM67 NA19240 esv3334334 1 229404351 229404998 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652066 M 185 1 0 TRIM67 NA19240 esv2182022 1 229413111 229413602 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4630860 M 1 0 1 TRIM67 NA18507 nsv945369 1 229495596 229512673 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824444,nssv1824435,nssv1823457,nssv1824417,nssv1823439,nssv1823484,nssv1823445,nssv1824419,nssv1823447,nssv1823471,nssv1823465,nssv1824432,nssv1823438,nssv1824436,nssv1824443,nssv1823491,nssv1823441,nssv1823483,nssv1823460,nssv1824433,nssv1824440,nssv1823466,nssv1824439,nssv1824426,nssv1824442,nssv1823461,nssv1823449,nssv1823478,nssv1823448,nssv1824425,nssv1823440,nssv1823488,nssv1823458,nssv1824453,nssv1824441,nssv1823469,nssv1823452,nssv1823476,nssv1823451,nssv1824449,nssv1823464,nssv1823487,nssv1823437,nssv1823475,nssv1823456,nssv1824416,nssv1824438,nssv1823459,nssv1824446,nssv1824423,nssv1823444,nssv1823490,nssv1824445,nssv1823467,nssv1823450,nssv1824430,nssv1823454,nssv1823479,nssv1823455,nssv1823436,nssv1823453,nssv1824434,nssv1823446,nssv1824456,nssv1823442,nssv1823473,nssv1824437,nssv1824421,nssv1823443,nssv1823474,nssv1823486,nssv1824448,nssv1824418,nssv1824452,nssv1824429,nssv1823462,nssv1823468,nssv1824454,nssv1823470,nssv1823489,nssv1823482,nssv1824427,nssv1823477,nssv1824422,nssv1824455,nssv1824420,nssv1824447,nssv1823472,nssv1823480,nssv1823481,nssv1824428,nssv1824424,nssv1824431,nssv1824451,nssv1824450,nssv1823485,nssv1823463 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv23094 1 229497906 229511290 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16249 M 40 1 1 "" NA11993,NA19108 nsv827197 1 229538427 229539873 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431873 M 31 0 1 EXOC8 AK20 nsv819245 1 229556039 229556651 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419024 M 2 0 1 SPRTN AK1 esv3437885 1 229559807 229559826 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598613 M 185 1 0 "" NA19141 nsv945371 1 229568185 229568796 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824483,nssv1824504,nssv1824552,nssv1824562,nssv1824555,nssv1824510,nssv1824492,nssv1824566,nssv1824484,nssv1824511,nssv1824485,nssv1824532,nssv1824477,nssv1824537,nssv1824493,nssv1824520,nssv1824554,nssv1824530,nssv1824556,nssv1824543,nssv1824480,nssv1824497,nssv1824499,nssv1824513,nssv1824551,nssv1824544,nssv1824495,nssv1824564,nssv1824476,nssv1824547,nssv1824478,nssv1824542,nssv1824474,nssv1824501,nssv1824482,nssv1824498,nssv1824475,nssv1824471,nssv1824472,nssv1824506,nssv1824553,nssv1824512,nssv1824487,nssv1824494,nssv1824549,nssv1824536,nssv1824557,nssv1824514,nssv1824479,nssv1824518,nssv1824491,nssv1824561,nssv1824550,nssv1824526,nssv1824500,nssv1824560,nssv1824489,nssv1824496,nssv1824473,nssv1824509,nssv1824548,nssv1824534,nssv1824488,nssv1824516,nssv1824481,nssv1824522,nssv1824486,nssv1824563,nssv1824490,nssv1824508,nssv1824567,nssv1824503,nssv1824541,nssv1824545,nssv1824546,nssv1824559,nssv1824523,nssv1824528,nssv1824524,nssv1824529,nssv1824527,nssv1824502,nssv1824505,nssv1824515,nssv1824533,nssv1824540,nssv1824538,nssv1824517,nssv1824525,nssv1824519,nssv1824558,nssv1824521,nssv1824565,nssv1824531,nssv1824535,nssv1824507,nssv1824539 M 97 10 0 EGLN1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv827208 1 229602071 229612586 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1429613,nssv1435701,nssv1434910 M 31 0 3 EGLN1 AK14,NA18566,NA18942 nsv441741 1 229602207 229609275 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656904,nssv1656903 M 270 0 2 EGLN1 NA18566,NA18942 esv2421419 1 229602207 229609279 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5104034,essv5093066,essv5156599,essv5107991,essv5149901,essv5155297,essv5037618,essv5023159,essv5133249,essv5138588,essv5036200,essv5143535 M 1184 0 12 EGLN1 NA17972,NA17980,NA17983,NA18150,NA18153,NA18536,NA18566,NA18614,NA18694,NA18942,NA18955,NA19072 nsv473481 1 229603157 229603157 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019507 M 9 1 0 EGLN1 NA19129 esv2761187 1 229632325 229654915 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005778,essv7005789 M 1109 0 2 "" SW_0581,SW_1232 nsv827219 1 229641326 229643897 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431130 M 31 0 1 "" AK18 esv2759004 1 229691383 229982619 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757775,esv2756887 M 270 2 0 DISC1,LINC00582,TSNAX,TSNAX-DISC1 NA10856,NA11830 nsv516935 1 229718014 229879757 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv693621,nssv655054,nssv657699,nssv673980,nssv701885,nssv685222,nssv685923,nssv683120,nssv694737 M 2026 9 0 DISC1,LINC00582,TSNAX,TSNAX-DISC1 esv2763669 1 229767124 229874905 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005822,essv7005800,essv7005833,essv7005811 M 1109 4 0 DISC1,LINC00582,TSNAX,TSNAX-DISC1 SW_0063,SW_0241,SW_0690,SW_1450 dgv582n100 1 229773510 229883087 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010390,nsv1011187,nsv1007473,nsv1012528,nsv998168,nsv1009119,nsv1000141,nsv1001706,nsv1014496 M 29084 29 0 DISC1,LINC00582,TSNAX-DISC1 nsv8902 1 229776582 229881534 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24883 M 31 1 0 DISC1,LINC00582,TSNAX-DISC1 NA11830 dgv849n54 1 229778112 229879757 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549336,nsv549337 M 17421 5 0 DISC1,LINC00582,TSNAX-DISC1 1780846030_A nsv468338 1 229778112 229879757 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543461 M 1557 1 0 DISC1,LINC00582,TSNAX-DISC1 1780846030_A nsv4821 1 229779759 229815121 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv593 M 9 1 0 LINC00582,TSNAX-DISC1 NA19240 nsv999063 1 229807320 230015955 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499813 M 29084 1 0 DISC1,LINC00582,TSNAX-DISC1 nsv474919 1 229817006 229817006 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016947 M 9 1 0 TSNAX-DISC1 NA18956 nsv4832 1 229825618 229856492 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3836 M 9 1 0 DISC1,TSNAX-DISC1 NA12878 nsv1003284 1 229901524 229954108 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705529 M 29084 0 1 DISC1,TSNAX-DISC1 esv3429698 1 229934952 229936650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692165 M 185 1 0 DISC1,TSNAX-DISC1 NA19240 esv1761772 1 229935465 229935465 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3632300 M 2 1 0 DISC1,TSNAX-DISC1 HuRef nsv509646 1 229985602 230012405 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617999,nssv619824,nssv623812 M 4 3 0 DISC1,TSNAX-DISC1 CHM,NA10860,NA18994 esv2762173 1 229992577 230022349 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005844 M 1109 0 1 DISC1,DISC2,TSNAX-DISC1 SW_0047 nsv4843 1 229995308 230003727 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3837 M 9 1 0 DISC1,TSNAX-DISC1 NA12878 esv3446715 1 229998713 229998739 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673942 M 185 1 0 DISC1,TSNAX-DISC1 NA12891 esv3308383 1 229998717 229998718 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836647,essv7837633,essv7839045 M 185 3 0 DISC1,TSNAX-DISC1 NA19238,NA19239,NA19240 esv3434648 1 229998722 229998741 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598624 M 185 1 0 DISC1,TSNAX-DISC1 NA12814 esv994187 1 230001860 230002269 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564243 M 3 1 0 DISC1,TSNAX-DISC1 HuRef esv3409551 1 230002164 230002353 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652067 M 185 1 0 DISC1,TSNAX-DISC1 NA19240 nsv476204 1 230060179 230060179 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020181 M 9 1 0 DISC1,TSNAX-DISC1 NA12878 nsv4855 1 230098102 230100398 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3838 M 9 1 0 DISC1,TSNAX-DISC1 NA12878 nsv1013883 1 230150208 230209232 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496072 M 29084 1 0 DISC1,TSNAX-DISC1 nsv468382 1 230152108 230269643 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543502 M 1557 0 1 DISC1,TSNAX-DISC1 1780862530_A nsv549338 1 230152108 230269643 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174056 M 17421 0 1 DISC1,TSNAX-DISC1 1780862530_A nsv477268 1 230192968 230192968 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016933 M 9 1 0 DISC1,TSNAX-DISC1 NA18517 nsv827230 1 230206141 230208159 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434225 M 31 1 0 DISC1,TSNAX-DISC1 NA18570 nsv1011509 1 230208567 230242929 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492025 M 29084 1 0 DISC1,TSNAX-DISC1 esv3449086 1 230211721 230211721 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825132 M 185 1 0 DISC1,TSNAX-DISC1 NA19240 nsv528452 1 230225302 230247195 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705051 M 2026 0 1 DISC1,TSNAX-DISC1 esv3372688 1 230316111 230316120 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863830 M 185 1 0 "" NA12005 esv1238042 1 230318910 230318910 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3797943 M 2 1 0 "" HuRef esv2764203 1 230328637 230336820 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007013,essv7007010,essv7007012 M 1109 0 3 "" RW_0100,RW_0522,RW_0541 esv5511 1 230331640 230331775 CNV gain Ahn_et_al_2009 19470904 Sequencing essv27952 M 1 0 0 "" nsv474582 1 230380538 230380538 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015488 M 9 1 0 "" NA18956 nsv832847 1 230387678 230582558 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441699 M 95 0 1 "" nsv4866 1 230414370 230458693 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1747 M 9 0 1 "" NA18555 esv3308420 1 230416775 230416776 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836788 M 185 1 0 "" NA19239 esv3357434 1 230416803 230416893 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673945,essv8673944 M 185 2 0 "" NA19239,NA19240 nsv999628 1 230416872 230549700 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483578 M 29084 1 0 "" nsv526070 1 230446119 230451233 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702310 M 2026 0 1 "" esv2439851 1 230488916 230490431 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5181446 M 1 0 1 "" NA18507 esv9142 1 230489545 230490271 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31583 M 1 0 0 "" esv2087346 1 230489546 230490276 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4952446 M 1 0 1 "" NA18507 esv3764 1 230489705 230490210 CNV loss Wang_et_al_2008 18987735 Sequencing essv26205 M 1 0 1 "" YH esv1011005 1 230489745 230490072 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574196 M 3 0 1 "" HuRef esv1309144 1 230489756 230490084 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4199689 M 2 0 1 "" HuRef nsv159622 1 230489757 230490084 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178200 M 24 "" nsv1005000 1 230513176 230568069 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489800 M 29084 0 1 "" nsv511140 1 230523808 230527800 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625154 M 1 0 1 "" 1 esv2609681 1 230524478 230527389 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5258466 M 1 0 1 "" NA18507 esv1005339 1 230524734 230528757 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564211 M 3 0 1 "" HuRef esv7610 1 230524960 230527081 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30051 M 1 0 0 "" esv2245122 1 230525027 230527072 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4768459 M 1 0 1 "" NA18507 nsv511741 1 230525169 230526872 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626386 M 1 0 1 "" 1 esv996127 1 230525189 230526400 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586945 M 3 0 1 "" HuRef dgv108n67 1 230525189 230526655 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827265,nsv827254,nsv827241 M 31 0 8 "" AK14,AK16,AK4,AK8,NA18547,NA18949,NA18951,NA18968 nsv158971 1 230525214 230526874 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177549 M 24 "" esv27862 1 230525246 230526864 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10676 M 40 0 18 "" NA07037,NA07045,NA11931,NA11993,NA11995,NA12004,NA12006,NA12156,NA12239,NA12489,NA12749,NA12776,NA12828,NA18508,NA18517,NA18523,NA19225,NA19257 esv1001999 1 230525246 230526965 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586281 M 3 0 1 "" HuRef dgv850n54 1 230525587 230526443 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549342,nsv549339 M 17421 0 6 "" dgv851n54 1 230525587 230526741 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549340,nsv549341 M 17421 0 210 "" dgv852n54 1 230525726 230526741 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549346,nsv549348,nsv549347,nsv549349,nsv549353,nsv549352,nsv549345,nsv549344,nsv549343 M 17421 0 34 "" dgv853n54 1 230525889 230526557 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549350,nsv549351 M 17421 0 2 "" nsv549354 1 230526110 230526686 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738094 M 17421 0 1 "" esv1663066 1 230534693 230534742 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3641170 M 2 0 1 "" HuRef nsv1006763 1 230543607 230660613 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705530 M 29084 1 0 SIPA1L2 esv8579 1 230571407 230571612 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31020 M 1 0 0 "" dgv303e59 1 230571468 230571568 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302525,esv3302783 M 185 24 0 "" NA11993,NA12287,NA12878,NA18501,NA18502,NA18523,NA18561,NA18571,NA18870,NA18916,NA18943,NA18944,NA18948,NA18951,NA18956,NA18965,NA18980,NA19005,NA19093,NA19108,NA19138,NA19210,NA19238,NA19240 esv3358846 1 230571482 230571557 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670881,essv8670880,essv8670879 M 185 3 0 "" NA12878,NA19238,NA19240 esv6581 1 230571506 230571719 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29022 M 1 0 0 "" esv1302051 1 230571558 230571558 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4208631 M 2 1 0 "" HuRef nsv521855 1 230574258 230580289 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694629 M 2026 1 0 "" nsv517546 1 230576628 230580289 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv652329,nssv658706 M 2026 2 0 "" nsv549355 1 230590795 230638005 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738095 M 17421 1 0 SIPA1L2 nsv820068 1 230633630 230634604 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419139 M 2 0 1 SIPA1L2 AK1 esv994086 1 230654382 230654382 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569893 M 3 1 0 SIPA1L2 HuRef esv1056324 1 230654397 230654397 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4239658 M 2 1 0 SIPA1L2 HuRef dgv583n100 1 230659951 230696098 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009845,nsv1011438,nsv1009996 M 29084 3 0 SIPA1L2 esv2750829 1 230661638 231445842 CNV gain Pinto_et_al_2007 17911159 SNP array essv6985212,essv6985214,essv6988905,essv6985213,essv6985215 M 771 5 0 MAP10,NTPCR,PCNXL2,SIPA1L2 SPC_127 esv3352928 1 230698931 230698944 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863831 M 185 1 0 SIPA1L2 NA12005 nsv4877 1 230723280 230757175 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4999 M 9 1 0 "" NA19129 esv26795 1 230788474 230789653 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13574 M 40 0 1 "" NA12749 nsv159788 1 230815723 230817765 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178366 M 24 "" esv4864 1 230842090 230842563 CNV loss Wang_et_al_2008 18987735 Sequencing essv27305 M 1 0 1 "" YH esv2502448 1 230884575 230885939 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5348443 M 1 0 1 "" NA18507 esv2343946 1 230885085 230885519 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4842390 M 1 0 1 "" NA18507 esv2470235 1 230935402 230936300 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5318703 M 1 1 0 "" NA18507 esv1198787 1 230935886 230935886 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3896714 M 2 1 0 "" HuRef esv3308086 1 230935886 230935887 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838314 M 185 1 0 "" NA12891 esv3358943 1 230935888 230935894 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673952,essv8673953,essv8673957,essv8673951,essv8673956,essv8673955 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv27250 1 230956876 230965864 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12356 M 40 1 1 "" NA12776,NA12828 nsv827276 1 230957171 230963832 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1424010 M 31 0 1 "" NA18582 esv2430324 1 230958126 230964601 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5280962 M 1 0 1 "" NA18507 dgv854n54 1 230959340 230962277 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549356,nsv549357 M 17421 0 2 "" dgv855n54 1 230959340 230963286 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549359,nsv549358 M 17421 3 0 "" dgv856n54 1 230959340 230967895 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549360,nsv549363 M 17421 0 3 "" esv2762174 1 230959371 230974172 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005856 M 1109 0 1 "" SW_1330 nsv549361 1 230960182 230962277 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738103,nssv738104,nssv738107,nssv738105,nssv738106,nssv738108 M 17421 0 6 "" nsv549362 1 230960182 230963286 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738109 M 17421 0 1 "" nsv945372 1 231117176 231119782 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824578,nssv1823522,nssv1824583,nssv1824616,nssv1824582,nssv1823523,nssv1823511,nssv1824607,nssv1823514,nssv1824632,nssv1824590,nssv1824613,nssv1824581,nssv1824602,nssv1823516,nssv1823503,nssv1824580,nssv1824595,nssv1824577,nssv1824628,nssv1824587,nssv1824593,nssv1824592,nssv1824600,nssv1823513,nssv1824622,nssv1824573,nssv1823500,nssv1824575,nssv1824614,nssv1823512,nssv1823527,nssv1824596,nssv1823507,nssv1824572,nssv1824627,nssv1823509,nssv1824594,nssv1823508,nssv1824617,nssv1824584,nssv1824636,nssv1824571,nssv1823520,nssv1823517,nssv1824608,nssv1824574,nssv1824609,nssv1823515,nssv1823504,nssv1824569,nssv1824610,nssv1824589,nssv1823501,nssv1824576,nssv1824634,nssv1824570,nssv1824603,nssv1823510,nssv1824598,nssv1824588,nssv1823505,nssv1824579,nssv1824615,nssv1824586,nssv1824631,nssv1824585,nssv1823521,nssv1824597,nssv1824604,nssv1824629,nssv1824623,nssv1824601,nssv1824633,nssv1824606,nssv1823524,nssv1823502,nssv1824568,nssv1824624,nssv1824591,nssv1824625,nssv1823506,nssv1824626,nssv1824605,nssv1824619,nssv1824611,nssv1824630,nssv1823519,nssv1824621,nssv1823525,nssv1824612,nssv1824618,nssv1823518,nssv1824635,nssv1824599,nssv1824620,nssv1823526 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832858 1 231180926 231348095 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441700 M 95 0 1 PCNXL2 nsv1012893 1 231274087 231314832 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493884 M 29084 0 1 PCNXL2 nsv437272 1 231300770 231308629 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467153 M 60 0 1 PCNXL2 NA19205 nsv474219 1 231310188 231310188 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012358 M 9 1 0 PCNXL2 NA18507 nsv832870 1 231322629 231482615 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441701 M 95 0 1 PCNXL2 esv3363951 1 231330693 231330706 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863833 M 185 1 0 PCNXL2 NA12005 nsv522164 1 231348833 231376041 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694937 M 2026 1 0 PCNXL2 nsv528272 1 231368281 231370581 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704840 M 2026 0 1 PCNXL2 esv3305422 1 231408728 231408729 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7769817 M 185 1 0 PCNXL2 NA11894 esv3394567 1 231408732 231408751 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598713 M 185 1 0 PCNXL2 NA11894 nsv945374 1 231489560 231492165 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823605,nssv1823570,nssv1823587,nssv1823639,nssv1823654,nssv1823637,nssv1823655,nssv1823572,nssv1823609,nssv1823643,nssv1823621,nssv1823641,nssv1823651,nssv1823569,nssv1823626,nssv1823640,nssv1823647,nssv1823575,nssv1823615,nssv1823584,nssv1823595,nssv1823645,nssv1823632,nssv1823563,nssv1823560,nssv1823565,nssv1823617,nssv1823564,nssv1823591,nssv1823566,nssv1823625,nssv1823562,nssv1823586,nssv1823582,nssv1823608,nssv1823576,nssv1823590,nssv1823573,nssv1823636,nssv1823642,nssv1823614,nssv1823580,nssv1823629,nssv1823646,nssv1823652,nssv1823568,nssv1823585,nssv1823644,nssv1823593,nssv1823578,nssv1823616,nssv1823577,nssv1823602,nssv1823561,nssv1823623,nssv1823574,nssv1823583,nssv1823579,nssv1823619,nssv1823571,nssv1823656,nssv1823567,nssv1823600,nssv1823638,nssv1823606,nssv1823581,nssv1823603,nssv1823589,nssv1823624,nssv1823588,nssv1823607,nssv1823633,nssv1823618,nssv1823597,nssv1823649,nssv1823631,nssv1823650,nssv1823630,nssv1823598,nssv1823611,nssv1823599,nssv1823634,nssv1823635,nssv1823622,nssv1823610,nssv1823627,nssv1823653,nssv1823594,nssv1823620,nssv1823612,nssv1823592,nssv1823601,nssv1823648,nssv1823604,nssv1823596,nssv1823613,nssv1823628 M 97 10 0 PCNXL2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv473315 1 231524183 231524183 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017411 M 9 1 0 "" NA19129 esv22442 1 231534565 231535081 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11169 M 40 4 0 KIAA1804 NA18517,NA19190,NA19240,NA19257 esv2431778 1 231585310 231586240 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5192450 M 1 1 0 KIAA1804 NA18507 esv3354604 1 231585745 231585767 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673959,essv8673958 M 185 2 0 KIAA1804 NA12878,NA19239 esv3309615 1 231585750 231585751 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837550,essv7836973 M 185 2 0 KIAA1804 NA19239,NA19240 esv3305388 1 231585752 231585753 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7788117,essv7812780,essv7807386,essv7814312,essv7772870,essv7804047,essv7780742,essv7773453,essv7816682,essv7781315,essv7818424,essv7786011,essv7787158,essv7775053,essv7793318,essv7777001,essv7821384,essv7822872,essv7790130,essv7783524,essv7824383,essv7799553,essv7806743,essv7786780,essv7827023,essv7791713,essv7798509,essv7790579,essv7794281,essv7819087,essv7821146,essv7808832,essv7826108,essv7828614,essv7782875,essv7776178,essv7796298,essv7827293,essv7774505,essv7773607,essv7835363,essv7827871,essv7791977,essv7809825,essv7784579,essv7820068 M 185 46 0 KIAA1804 NA07000,NA07357,NA10847,NA11840,NA11931,NA11993,NA12044,NA12287,NA12489,NA12761,NA12812,NA12828,NA12872,NA12878,NA18507,NA18508,NA18519,NA18526,NA18537,NA18542,NA18545,NA18550,NA18552,NA18558,NA18561,NA18562,NA18571,NA18573,NA18576,NA18577,NA18579,NA18593,NA18608,NA18638,NA18944,NA18948,NA18953,NA18959,NA18960,NA18961,NA18980,NA19093,NA19108,NA19129,NA19225,NA19239 esv3325227 1 231585757 231585776 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598724,essv9598735 M 185 2 0 KIAA1804 NA11840,NA12812 esv3325872 1 231585760 231585771 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903535,essv8903529,essv8903512,essv8903524,essv8903541,essv8903538,essv8903528,essv8903548,essv8903540,essv8903534,essv8903520,essv8903517,essv8903521,essv8903532,essv8903530,essv8903511,essv8903522,essv8903513,essv8903549,essv8903537,essv8903510,essv8903518,essv8903507,essv8903519,essv8903516,essv8903545,essv8903523,essv8903543,essv8903508,essv8903526,essv8903531,essv8903544,essv8903539,essv8903542,essv8903509,essv8903546,essv8903550,essv8903551,essv8903533,essv8903515,essv8903527 M 185 41 0 KIAA1804 NA07000,NA07357,NA10847,NA11931,NA11993,NA12044,NA12287,NA12489,NA12761,NA12828,NA18507,NA18508,NA18519,NA18526,NA18537,NA18542,NA18545,NA18550,NA18552,NA18558,NA18561,NA18562,NA18571,NA18573,NA18576,NA18577,NA18579,NA18593,NA18608,NA18638,NA18944,NA18948,NA18953,NA18959,NA18960,NA18961,NA18980,NA19093,NA19108,NA19129,NA19225 nsv4888 1 231658293 231690398 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3839 M 9 1 0 "" NA12878 nsv521927 1 231735349 231737008 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694697 M 2026 0 1 "" nsv522289 1 231754864 231767919 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695071 M 2026 0 1 "" dgv584n100 1 231770353 231821100 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006880,nsv998926,nsv1008006 M 29084 0 5 KCNK1 dgv28n21 1 231781554 231802091 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv523182,nsv525793 M 2026 2 0 "" nsv1006016 1 231791723 231814149 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501998 M 29084 0 1 "" esv2764220 1 231791723 231814161 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007015,essv7007014 M 1109 0 2 "" RW_0006,RW_0612 nsv525217 1 231796069 231812882 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701303 M 2026 0 1 "" nsv827287 1 231815401 231817373 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432644 M 31 1 0 KCNK1 NA18972 nsv827298 1 231815634 231816837 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440872 M 31 1 0 KCNK1 NA18969 nsv528071 1 231822688 231832150 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704607 M 2026 0 1 KCNK1,MIR4427 esv27945 1 231832888 231833668 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20225 M 40 0 4 KCNK1 NA18858,NA18907,NA19240,NA19257 nsv522207 1 231871795 231879695 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694144 M 2026 0 1 KCNK1 nsv159841 1 231875039 231875039 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178419 M 24 "" esv3891215 1 231896497 231941256 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25786533 M 3017 0 1 "" nsv832881 1 231896561 232078841 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441702 M 95 1 0 "" nsv1013472 1 231918668 232013408 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497286 M 29084 1 0 "" esv2479947 1 231931345 231932844 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5347468 M 1 0 1 "" NA18507 esv1009645 1 231931532 231932320 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564279 M 3 0 1 "" HuRef esv5970 1 231931553 231932226 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28411 M 1 0 0 "" esv2272839 1 231931580 231932275 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4518506 M 1 0 1 "" NA18507 esv1059840 1 231931778 231932109 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3776964 M 2 0 1 "" HuRef esv7709 1 231980077 231980257 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30150 M 1 0 0 "" nsv832892 1 231986370 232167217 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441703 M 95 0 1 SLC35F3 nsv819592 1 232016517 232019178 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419460 M 2 0 1 "" AK1 nsv508066 1 232026619 232032619 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624234,nssv618525 M 4 0 0 "" CHM,NA18994 esv2621090 1 232028299 232031268 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5314345 M 1 0 1 "" NA18507 nsv511742 1 232028629 232030966 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626387 M 1 0 1 "" 1 nsv827309 1 232080059 232081018 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431131 M 31 0 1 "" AK18 nsv506983 1 232118851 232124851 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619264,nssv623295,nssv620680 M 4 0 0 SLC35F3 NA10860,NA15510,NA18994 esv1716945 1 232137187 232137187 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4280901 M 2 1 0 SLC35F3 HuRef nsv4899 1 232213765 232247727 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8178 M 9 1 0 SLC35F3 NA12156 nsv549364 1 232241577 232322680 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738112,nssv738111 M 17421 0 2 SLC35F3 dgv857n54 1 232259309 232322680 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549366,nsv549365 M 17421 0 2 SLC35F3 esv2762225 1 232266144 232274818 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007016 M 1109 0 1 SLC35F3 RW_0511 esv33741 1 232316803 232316906 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101365,essv100671,essv96440,essv95032,essv93666,essv97862,essv98702,essv98167,essv99797,essv97280,essv94294,essv100189 M 51 0 12 SLC35F3 21606,21656,21772,21805,21837,21972,22075,22086,22231,22261,22286,22394 esv33370 1 232323088 232323409 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv97539,essv94535 M 51 0 2 SLC35F3 21616,21932 nsv1012676 1 232324230 232337603 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496585 M 29084 1 0 SLC35F3 nsv832903 1 232330964 232487226 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441713,nssv1441722,nssv1441710,nssv1441712,nssv1441725,nssv1441704,nssv1441711,nssv1441709,nssv1441716,nssv1441720,nssv1441708,nssv1441717,nssv1441705,nssv1441721,nssv1441706,nssv1441719,nssv1441715,nssv1441726,nssv1441723,nssv1441714,nssv1441724 M 95 0 21 SLC35F3 nsv519237 1 232344068 232346267 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696728 M 2026 0 1 SLC35F3 nsv475392 1 232370010 232370010 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018287 M 9 1 0 SLC35F3 NA19240 nsv481199 1 232372816 232372816 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012380 M 9 0 0 SLC35F3 nsv477055 1 232378084 232378084 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017286 M 9 1 0 SLC35F3 NA18517 nsv819148 1 232384422 232386460 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419371 M 2 0 1 SLC35F3 AK1 esv7223 1 232385061 232386598 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29664 M 1 0 0 SLC35F3 esv4582 1 232385234 232386448 CNV loss Wang_et_al_2008 18987735 Sequencing essv27023 M 1 0 1 SLC35F3 YH nsv159799 1 232385268 232386370 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178377 M 24 SLC35F3 esv990606 1 232385486 232386200 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586959 M 3 1 0 SLC35F3 HuRef dgv109n67 1 232385486 232386334 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827331,nsv827320 M 31 0 28 SLC35F3 AK10,AK12,AK14,AK16,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv549367 1 232385797 232386209 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738130,nssv738129,nssv738125,nssv738124,nssv738123,nssv738131,nssv738121,nssv738127,nssv738128,nssv738122,nssv738120,nssv738126,nssv738136,nssv738119,nssv738118,nssv738115,nssv738135,nssv738116,nssv738117,nssv738134,nssv738133,nssv738132 M 17421 0 22 SLC35F3 nsv549368 1 232385797 232388096 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738137 M 17421 0 1 SLC35F3 esv24323 1 232385802 232386274 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16067 M 40 0 1 SLC35F3 NA12776 esv1005100 1 232385812 232386343 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586192 M 3 1 0 SLC35F3 HuRef nsv827342 1 232385860 232386334 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434226 M 31 0 1 SLC35F3 NA18570 nsv509657 1 232403562 232414880 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619826,nssv618000,nssv623814,nssv621110 M 4 4 0 SLC35F3 CHM,NA10860,NA15510,NA18994 esv3334867 1 232409730 232409853 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652068 M 185 1 0 SLC35F3 NA19240 nsv479135 1 232448851 232448851 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014082 M 9 0 0 SLC35F3 nsv512759 1 232449900 232450787 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625389 M 1 1 0 SLC35F3 1 nsv522312 1 232456048 232461794 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695092 M 2026 0 1 SLC35F3 dgv585n100 1 232456795 232685495 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005270,nsv1007006 M 29084 3 0 COA6,MIR4671,SLC35F3,TARBP1 nsv549369 1 232465503 232479982 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738138 M 17421 0 1 SLC35F3 nsv945375 1 232487649 232490225 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823741,nssv1823715,nssv1823666,nssv1823725,nssv1823679,nssv1823745,nssv1823660,nssv1823703,nssv1823658,nssv1823706,nssv1823736,nssv1823721,nssv1823740,nssv1823752,nssv1823734,nssv1823689,nssv1823681,nssv1823744,nssv1823737,nssv1823701,nssv1823676,nssv1823718,nssv1823677,nssv1823751,nssv1823662,nssv1823684,nssv1823738,nssv1823729,nssv1823669,nssv1823710,nssv1823739,nssv1823750,nssv1823670,nssv1823732,nssv1823667,nssv1823726,nssv1823673,nssv1823682,nssv1823678,nssv1823705,nssv1823743,nssv1823714,nssv1823664,nssv1823692,nssv1823735,nssv1823723,nssv1823665,nssv1823683,nssv1823675,nssv1823722,nssv1823674,nssv1823733,nssv1823742,nssv1823687,nssv1823672,nssv1823712,nssv1823663,nssv1823702,nssv1823668,nssv1823680,nssv1823671,nssv1823699,nssv1823686,nssv1823753,nssv1823685,nssv1823704,nssv1823661,nssv1823720,nssv1823659,nssv1823748,nssv1823696,nssv1823713,nssv1823716,nssv1823730,nssv1823711,nssv1823690,nssv1823657,nssv1823697,nssv1823728,nssv1823746,nssv1823708,nssv1823694,nssv1823700,nssv1823731,nssv1823724,nssv1823691,nssv1823719,nssv1823695,nssv1823747,nssv1823749,nssv1823717,nssv1823693,nssv1823709,nssv1823727,nssv1823707,nssv1823698,nssv1823688 M 97 10 0 SLC35F3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv159229 1 232572811 232576481 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177807 M 24 COA6 esv3384971 1 232629530 232629549 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598825 M 185 1 0 TARBP1 NA19141 nsv4910 1 232639505 232656359 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8185 M 9 0 1 TARBP1 NA12156 esv4245 1 232653749 232654244 CNV loss Wang_et_al_2008 18987735 Sequencing essv26686 M 1 0 1 TARBP1 YH esv1010367 1 232653826 232654135 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581905 M 3 0 1 TARBP1 HuRef esv1731674 1 232653834 232654144 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4064257 M 2 0 1 TARBP1 HuRef esv3891226 1 232668209 232679673 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780887 M 3017 0 1 TARBP1 dgv29n21 1 232670496 232679673 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv524608,nsv519695 M 2026 0 2 TARBP1 esv21821 1 232680689 232681459 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13288 M 40 0 1 TARBP1 NA07045 dgv858n54 1 232680716 232681423 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549373,nsv549370 M 17421 7 0 TARBP1 nsv549371 1 232680716 232681423 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738147,nssv738146,nssv738145,nssv738144,nssv738143,nssv738142 M 17421 4 2 TARBP1 nsv549372 1 232680716 232683145 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738148 M 17421 1 0 TARBP1 nsv549374 1 232680774 232683145 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738153 M 17421 0 1 TARBP1 nsv832914 1 232722606 232924137 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441727 M 95 0 1 IRF2BP2,LINC00184,LOC100506795 nsv441742 1 232770219 232774658 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656907,nssv1656908,nssv1656905,nssv1656910,nssv1656909,nssv1656906 M 270 0 6 "" NA18547,NA18942,NA18945,NA18960,NA18966,NA18973 dgv110n67 1 232770404 232775990 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827353,nsv827365,nsv827376 M 31 0 3 "" NA18547,NA18942,NA18973 nsv524784 1 232770669 232773999 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700776 M 2026 0 1 "" nsv468395 1 232776892 232810873 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543514 M 1557 0 1 IRF2BP2 1780862416_A nsv549375 1 232776892 232810873 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174057 M 17421 0 1 IRF2BP2 1780862416_A nsv827387 1 232783177 232823596 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423952 M 31 1 0 IRF2BP2 NA18968 nsv4921 1 232790749 232824369 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2782 M 9 1 0 IRF2BP2 NA18555 dgv859n54 1 232809860 232812587 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549376,nsv549377,nsv549378 M 17421 0 3 IRF2BP2 nsv549379 1 232810151 232812746 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738157 M 17421 1 0 IRF2BP2 dgv860n54 1 232810873 232813435 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549380,nsv549389 M 17421 0 2 IRF2BP2 esv25047 1 232810941 232813883 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16213 M 40 0 2 IRF2BP2 NA07045,NA12489 dgv861n54 1 232810971 232812897 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549382,nsv549381 M 17421 3 3 IRF2BP2 dgv862n54 1 232810971 232813609 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549390,nsv549383,nsv549384,nsv549387,nsv549385 M 17421 12 0 IRF2BP2 dgv863n54 1 232811260 232811894 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549388,nsv549386 M 17421 0 2 IRF2BP2 nsv997450 1 232864717 232905217 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484074 M 29084 1 0 "" esv2353164 1 232865325 232865770 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4622061 M 1 0 1 "" NA18507 esv2532455 1 232871939 232872857 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5222830 M 1 1 0 "" NA18507 nsv832925 1 232875925 233058352 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441730,nssv1441728,nssv1441731 M 95 0 3 LINC01132 nsv506984 1 232890271 232896271 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623296 M 4 0 0 "" NA18994 nsv947472 1 232895683 232909993 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762884 M 97 1 0 "" HGDP00998 nsv827398 1 232917530 232917994 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434227 M 31 0 1 "" NA18570 nsv472869 1 232928564 232928564 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013248 M 9 1 0 LINC01132 NA18555 esv2759005 1 232939949 233194586 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757776 M 270 6 7 "" NA12707,NA18507,NA18547,NA18570,NA18603,NA18608,NA18637,NA18913,NA19094,NA19101,NA19139,NA19206,NA19211 nsv428323 1 232939949 233194586 CNV loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv453142,nssv453153,nssv453164 M 62 0 3 "" HGDP00450,HGDP00460,NA18498 dgv111n67 1 232973634 233024889 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv827442,nsv827409,nsv827431 M 31 29 0 "" AK10,AK12,AK14,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18547,NA18552,NA18564,NA18566,NA18570,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv821094 1 232973634 233024889 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1421024 M 1 1 0 "" NA10851 dgv314e59 1 232978152 233022950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3415973,esv3449065,esv3416865 M 185 3 0 "" NA12878,NA12891,NA12892 dgv315e59 1 232978252 232987550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3427940,esv3396807 M 185 2 0 "" NA19239,NA19240 esv3365704 1 232978452 232991750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692172 M 185 1 0 "" NA19238 esv29663 1 232978568 233024889 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14900 M 40 13 5 "" NA07045,NA11993,NA11995,NA12004,NA12156,NA12239,NA12414,NA12749,NA12878,NA18505,NA18511,NA18517,NA18858,NA18909,NA19129,NA19190,NA19225,NA19257 nsv8913 1 232978694 233025699 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv23980,nssv23702,nssv27155,nssv24298,nssv21775 M 31 3 2 "" NA07048,NA18564,NA18980,NA19007,NA19132 nsv827420 1 232978850 232985100 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1424012 M 31 1 0 "" NA18582 nsv945376 1 232979241 232990092 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823761,nssv1823755,nssv1823756,nssv1823759,nssv1823760,nssv1823764,nssv1823758,nssv1823757,nssv1823762,nssv1823754,nssv1823763 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3334043 1 232994652 232997750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692173 M 185 1 0 "" NA19238 nsv945377 1 232995079 233023053 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823772,nssv1823773,nssv1823771,nssv1823774,nssv1823767,nssv1823770,nssv1823775,nssv1823766,nssv1823769,nssv1823768,nssv1823765 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2762226 1 232996794 233130493 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7007017 M 1109 1 0 "" RW_0171 esv3447875 1 232998452 233005150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692174 M 185 1 0 "" NA19238 esv3328766 1 233005952 233011550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692176 M 185 1 0 "" NA19238 esv3379420 1 233008452 233010550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692177 M 185 1 0 "" NA19240 esv3379320 1 233012952 233018950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692178 M 185 1 0 "" NA19238 dgv316e59 1 233019752 233023250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3351853,esv3332261 M 185 2 0 "" NA12891,NA12892 esv3390847 1 233020252 233022150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692180 M 185 1 0 "" NA19238 esv3367264 1 233048699 233048728 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863835,essv7863834 M 185 2 0 "" NA18520,NA18961 esv2762175 1 233061988 233067797 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005867 M 1109 0 1 "" SW_1343 esv3428386 1 233063452 233066050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692182 M 185 1 0 "" NA19239 nsv525688 1 233092198 233094294 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701846 M 2026 0 1 "" esv3446000 1 233104752 233106050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692183 M 185 1 0 "" NA19239 nsv528765 1 233120332 233128804 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705428 M 2026 0 1 "" nsv4932 1 233128273 233149159 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5009 M 9 1 0 "" NA19129 esv3351535 1 233167463 233167481 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903695 M 185 1 0 "" NA18517 esv3306084 1 233167470 233167471 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7741051 M 185 1 0 "" NA18517 nsv4943 1 233174054 233201574 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8195 M 9 1 0 "" NA12156 nsv481320 1 233201565 233201565 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013583 M 9 0 0 "" esv3417245 1 233204905 233204916 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863836 M 185 1 0 "" NA12005 nsv473271 1 233206674 233206674 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011256 M 9 1 0 "" NA19129 nsv479718 1 233207608 233207608 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016578 M 9 0 0 "" nsv477110 1 233208162 233208162 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014367 M 9 1 0 "" NA18517 nsv481616 1 233208711 233208711 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018126 M 9 0 0 "" nsv478565 1 233213511 233213511 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020035 M 9 1 0 "" NA18507 nsv475284 1 233213822 233213822 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015459 M 9 1 0 "" NA19240 nsv473164 1 233215382 233215382 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019690 M 9 1 0 "" NA19129 nsv480377 1 233215497 233215497 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020336 M 9 0 0 "" nsv481566 1 233216794 233216794 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010814 M 9 0 0 "" esv2762177 1 233218111 233232307 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005878 M 1109 0 1 "" SW_0102 nsv481445 1 233218259 233218259 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017426 M 9 0 0 "" nsv479587 1 233218536 233218536 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012162 M 9 0 0 "" nsv481418 1 233219274 233219274 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018724 M 9 0 0 "" nsv480579 1 233221308 233221308 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017095 M 9 0 0 "" nsv475422 1 233221316 233221316 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011174 M 9 1 0 "" NA19240 nsv481270 1 233225229 233225229 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012850 M 9 0 0 "" nsv479777 1 233227420 233227420 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011248 M 9 0 0 "" esv1346720 1 233228421 233228421 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3666340 M 2 1 0 "" HuRef nsv476704 1 233231707 233231707 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020098 M 9 1 0 "" NA12878 esv2462790 1 233320997 233323502 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5344925 M 1 0 1 "" NA18507 esv3891237 1 233329785 233363561 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780189 M 3017 0 1 RBM34,SNORA14B,TOMM20 nsv945381 1 233340152 233341997 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1825100,nssv1825042,nssv1825064,nssv1825095,nssv1825067,nssv1825040,nssv1825078,nssv1825088,nssv1825082,nssv1823785,nssv1825049,nssv1823789,nssv1825085,nssv1825033,nssv1825044,nssv1823786,nssv1825081,nssv1823780,nssv1825107,nssv1825091,nssv1825036,nssv1825094,nssv1825050,nssv1823790,nssv1825073,nssv1823784,nssv1825077,nssv1825035,nssv1825084,nssv1823783,nssv1825051,nssv1825092,nssv1825074,nssv1823781,nssv1825058,nssv1825093,nssv1825052,nssv1823795,nssv1825072,nssv1823788,nssv1825038,nssv1823782,nssv1825048,nssv1823799,nssv1825053,nssv1825090,nssv1825070,nssv1823787,nssv1825104,nssv1825039,nssv1825034,nssv1825097,nssv1825046,nssv1823797,nssv1825105,nssv1823796,nssv1825061,nssv1823791,nssv1825068,nssv1823798,nssv1825103,nssv1823792,nssv1825063,nssv1823793,nssv1825106,nssv1825089,nssv1825101,nssv1825096,nssv1825098,nssv1825032,nssv1825062,nssv1823794,nssv1825079,nssv1825075,nssv1825102,nssv1825065,nssv1825071,nssv1825054,nssv1825086,nssv1825080,nssv1825047,nssv1825069,nssv1825057,nssv1825059,nssv1825043,nssv1825083,nssv1825066,nssv1825087,nssv1823779,nssv1825055,nssv1825041,nssv1825045,nssv1825076,nssv1825056,nssv1825060,nssv1825037,nssv1825099 M 97 10 0 TOMM20 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474097 1 233342552 233342552 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018320 M 9 1 0 TOMM20 NA12156 nsv508699 1 233347104 233382593 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619000,nssv622789,nssv620155 M 4 0 3 RBM34,SNORA14B,TOMM20 NA10860,NA15510,NA18994 esv275126 1 233347186 233365995 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586049 M 1250 0 1 RBM34,SNORA14B,TOMM20 dgv30n21 1 233427940 233835001 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv523941,nsv528775 M 2026 2 0 ARID4B,B3GALNT2,GGPS1,GNG4,TBCE nsv947473 1 233433263 233438116 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761504 M 97 1 0 ARID4B HGDP00998 nsv1013571 1 233440669 233817728 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494947 M 29084 1 0 ARID4B,B3GALNT2,GGPS1,GNG4,TBCE nsv549391 1 233449811 233490230 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738180 M 17421 0 1 ARID4B nsv827453 1 233459124 233459581 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440876 M 31 0 1 ARID4B NA18969 esv1108970 1 233524363 233524518 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3735562 M 2 0 1 ARID4B HuRef esv1314619 1 233526784 233526784 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3632032 M 2 1 0 ARID4B HuRef esv1721702 1 233539568 233539568 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3883823 M 2 1 0 ARID4B HuRef nsv1012106 1 233584028 233631740 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492295 M 29084 0 1 TBCE nsv481050 1 233597285 233597285 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015589 M 9 0 0 "" dgv586n100 1 233597647 233777399 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009846,nsv1007248,nsv1006078 M 29084 3 0 B3GALNT2,TBCE esv2523478 1 233603127 233605576 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5252271 M 1 0 1 TBCE NA18507 nsv471774 1 233603367 233605161 CNV loss Hinds_et_al_2006 16327809 Oligo aCGH,PCR nssv646055 M 95 TBCE esv1003266 1 233603602 233605070 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565276 M 3 0 1 TBCE HuRef nsv549392 1 233605643 233778311 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738181 M 17421 1 0 B3GALNT2,GNG4,TBCE nsv1011288 1 233606594 233896225 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491065 M 29084 1 0 B3GALNT2,GNG4,LYST,TBCE nsv468406 1 233625329 233693029 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543525 M 1557 1 0 B3GALNT2,TBCE 1780854491_A nsv549393 1 233625329 233693029 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174058 M 17421 1 0 B3GALNT2,TBCE 1780854491_A nsv509668 1 233636037 233660848 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619827,nssv621111 M 4 2 0 TBCE NA10860,NA15510 nsv4954 1 233638783 233662862 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3840 M 9 1 0 TBCE NA12878 nsv478367 1 233666485 233666485 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017179 M 9 1 0 TBCE NA18507 dgv587n100 1 233675233 233761809 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001957,nsv1000657 M 29084 3 0 B3GALNT2,TBCE esv2762178 1 233718672 233730497 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005889 M 1109 0 1 B3GALNT2 SW_1119 nsv524135 1 233747085 233752293 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700013 M 2026 0 1 "" nsv819005 1 233747162 233752430 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419696 M 2 0 1 "" AK1 nsv945382 1 233767063 233772175 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1825139,nssv1825156,nssv1825113,nssv1825157,nssv1825192,nssv1825166,nssv1825119,nssv1825196,nssv1825190,nssv1825142,nssv1825129,nssv1825165,nssv1825118,nssv1825134,nssv1825110,nssv1825173,nssv1825122,nssv1825182,nssv1825130,nssv1825161,nssv1825121,nssv1825164,nssv1825115,nssv1825175,nssv1825185,nssv1825153,nssv1825191,nssv1825171,nssv1825188,nssv1825141,nssv1825132,nssv1825174,nssv1825117,nssv1825178,nssv1825193,nssv1825204,nssv1825111,nssv1825197,nssv1825136,nssv1825179,nssv1825189,nssv1825133,nssv1825114,nssv1825147,nssv1825124,nssv1825170,nssv1825137,nssv1825131,nssv1825112,nssv1825146,nssv1825123,nssv1825108,nssv1825187,nssv1825155,nssv1825120,nssv1825149,nssv1825194,nssv1825169,nssv1825116,nssv1825148,nssv1825186,nssv1825183,nssv1825128,nssv1825145,nssv1825126,nssv1825150,nssv1825125,nssv1825201,nssv1825109,nssv1825160,nssv1825127,nssv1825181,nssv1825167,nssv1825163,nssv1825195,nssv1825200,nssv1825135,nssv1825159,nssv1825162,nssv1825203,nssv1825199,nssv1825158,nssv1825143,nssv1825198,nssv1825176,nssv1825168,nssv1825202,nssv1825172,nssv1825151,nssv1825177,nssv1825138,nssv1825180,nssv1825152,nssv1825184,nssv1825154,nssv1825140,nssv1825144 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv21937 1 233767082 233771549 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19758 M 40 0 1 "" NA18508 nsv476824 1 233778389 233778389 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015075 M 9 1 0 GNG4 NA12878 nsv1013413 1 233790635 233837328 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497216 M 29084 1 0 GNG4 esv2471335 1 233816894 233817777 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5318849 M 1 1 0 GNG4 NA18507 nsv832936 1 233874221 234039870 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441732,nssv1441733 M 95 2 0 GNG4,LYST nsv472320 1 233901422 233901422 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018289 M 9 1 0 LYST NA18555 nsv945383 1 233967826 233970010 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823853,nssv1823829,nssv1825212,nssv1823834,nssv1823848,nssv1823837,nssv1823847,nssv1823839,nssv1825219,nssv1823859,nssv1825218,nssv1823857,nssv1823852,nssv1825243,nssv1825227,nssv1825241,nssv1823846,nssv1823836,nssv1823849,nssv1823819,nssv1825220,nssv1823827,nssv1825207,nssv1823826,nssv1825226,nssv1825248,nssv1825236,nssv1825251,nssv1825229,nssv1825231,nssv1825214,nssv1823833,nssv1823850,nssv1823821,nssv1825210,nssv1825239,nssv1825211,nssv1825205,nssv1825215,nssv1825230,nssv1823855,nssv1823863,nssv1825221,nssv1823818,nssv1825234,nssv1823830,nssv1825209,nssv1823864,nssv1823851,nssv1823841,nssv1825213,nssv1823856,nssv1825217,nssv1823860,nssv1825216,nssv1825238,nssv1825233,nssv1823845,nssv1825223,nssv1823835,nssv1825225,nssv1825246,nssv1823854,nssv1825244,nssv1825222,nssv1823844,nssv1825208,nssv1825250,nssv1825206,nssv1823842,nssv1825224,nssv1823865,nssv1823838,nssv1823822,nssv1823861,nssv1825245,nssv1823817,nssv1823862,nssv1823858,nssv1823828,nssv1823840,nssv1825242,nssv1825249,nssv1825228,nssv1823824,nssv1823816,nssv1825247,nssv1823832,nssv1825235,nssv1825232,nssv1823823,nssv1823825,nssv1825240,nssv1823820,nssv1825237,nssv1823831,nssv1823843 M 97 10 0 LYST HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832947 1 234000922 234185165 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441734 M 95 1 0 LYST,MIR1537 nsv508701 1 234022168 234055491 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622790 M 4 0 1 LYST NA18994 dgv588n100 1 234043217 234111389 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007914,nsv997513 M 29084 2 0 LYST,MIR1537 dgv589n100 1 234084664 234122228 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003013,nsv1002410 M 29084 3 0 LYST nsv1012436 1 234090580 234878023 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496317 M 29084 0 1 EDARADD,ERO1LB,GPR137B,HEATR1,LGALS8,LGALS8-AS1,LYST,NID1 nsv549394 1 234106500 234859629 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738182 M 17421 1 0 EDARADD,ERO1LB,GPR137B,HEATR1,LGALS8,LGALS8-AS1,LYST,NID1 nsv159765 1 234114063 234114529 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178343 M 24 "" dgv31n21 1 234117830 234120795 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv517883,nsv524989 M 2026 0 2 "" esv2655115 1 234120613 234122262 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5165715 M 1 0 1 "" NA18507 esv7675 1 234120956 234121751 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30116 M 1 0 0 "" esv1930649 1 234121005 234121753 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4737426 M 1 0 1 "" NA18507 nsv160124 1 234121199 234121536 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178702 M 24 "" nsv1005877 1 234142258 235268431 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501834 M 29084 1 0 ACTN2,EDARADD,ERO1LB,GPR137B,HEATR1,LGALS8,LGALS8-AS1,MT1HL1,MTR,NID1 nsv832958 1 234150544 234355279 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441735 M 95 0 1 NID1 esv9322 1 234206245 234206447 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31763 M 1 0 0 NID1 nsv509679 1 234281751 234348107 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619828,nssv623815,nssv621112 M 4 3 0 NID1 NA10860,NA15510,NA18994 nsv549395 1 234311638 234364781 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738183 M 17421 1 0 "" nsv4966 1 234321503 234344990 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5027,nssv3841,nssv9418,nssv6186,nssv1765 M 9 5 0 "" NA12156,NA12878,NA18517,NA18555,NA19129 nsv468417 1 234321657 234332288 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543536 M 1557 0 1 "" 1782681278_A nsv549396 1 234321657 234332288 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174059 M 17421 0 1 "" 1782681278_A esv989080 1 234326467 234327001 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564281 M 3 1 0 "" HuRef esv2486243 1 234326832 234327366 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5289063 M 1 1 0 "" NA18507 esv998032 1 234327225 234328673 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564413 M 3 1 0 "" HuRef dgv317e59 1 234331052 234332150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3410811,esv3342146 M 185 2 0 "" NA19239,NA19240 nsv832969 1 234340935 234541366 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441736 M 95 1 0 ERO1LB,GPR137B nsv827464 1 234345490 234346353 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431877 M 31 1 0 "" AK20 esv8947 1 234345697 234346651 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31388 M 1 0 0 "" nsv516792 1 234349280 234357655 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv670903,nssv693540,nssv661118,nssv655322 M 2026 0 4 "" nsv468428 1 234350923 234424014 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543547 M 1557 0 1 GPR137B HGDP00264 nsv549397 1 234350923 234424014 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174060 M 17421 0 1 GPR137B HGDP00264 nsv468439 1 234358516 234376647 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543558 M 1557 0 1 GPR137B 1780862101_A nsv549398 1 234358516 234376647 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174061 M 17421 0 1 GPR137B 1780862101_A nsv549399 1 234359291 234381693 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738184 M 17421 1 0 GPR137B dgv590n100 1 234369345 234497636 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007023,nsv1014768 M 29084 3 0 ERO1LB,GPR137B nsv827476 1 234371368 234373399 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432647 M 31 1 0 GPR137B NA18972 esv3345110 1 234379452 234380750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692187 M 185 1 0 GPR137B NA19240 esv1123909 1 234416256 234416256 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4056459 M 2 1 0 GPR137B HuRef esv28317 1 234429924 234432582 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14827 M 40 0 1 GPR137B NA19108 nsv522991 1 234445772 234480069 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698661 M 2026 0 1 ERO1LB nsv827487 1 234451921 234452471 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440877 M 31 0 1 ERO1LB NA18969 esv1064239 1 234469801 234469801 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3650262 M 2 1 0 ERO1LB HuRef nsv468450 1 234480069 234613009 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543569 M 1557 1 0 ERO1LB HGDP00307 nsv549400 1 234480069 234613009 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174062 M 17421 1 0 ERO1LB HGDP00307 esv2763410 1 234564131 234965665 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005911,essv7005900 M 1109 2 0 ACTN2,EDARADD,HEATR1,LGALS8,LGALS8-AS1 SW_0006,SW_1358 nsv508702 1 234569240 234618109 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622791,nssv620156 M 4 0 2 "" NA15510,NA18994 nsv4977 1 234578807 234620873 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1766 M 9 0 1 "" NA18555 esv3305234 1 234604815 234604816 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7766826,essv7766433,essv7764067 M 185 3 0 "" NA11881,NA12043,NA12814 esv3411594 1 234604821 234604840 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9598969 M 185 1 0 "" NA12814 esv1002624 1 234605389 234609416 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565753 M 3 1 0 "" HuRef esv2601364 1 234614948 234618304 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5202829 M 1 0 1 "" NA18507 esv7130 1 234615497 234618190 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29571 M 1 0 0 "" esv1989882 1 234615552 234618141 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4827534 M 1 0 1 "" NA18507 esv3512 1 234615682 234618090 CNV loss Wang_et_al_2008 18987735 Sequencing essv25953 M 1 0 1 "" YH nsv511743 1 234615686 234618105 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626389 M 1 0 1 "" 1 nsv498712 1 234615709 234617970 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585428 M 9 0 1 "" esv1594760 1 234615726 234617969 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4209242 M 2 0 1 "" HuRef nsv477568 1 234632758 234632758 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015893 M 9 1 0 EDARADD NA18517 nsv820827 1 234650974 234652210 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421035 M 1 0 1 EDARADD NA10851 esv28853 1 234650974 234653136 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19151,esv14989 M 40 14 0 EDARADD NA12004,NA12489,NA12749,NA18511,NA18517,NA18861,NA18907,NA18909,NA19099,NA19114,NA19129,NA19190,NA19225,NA19257 nsv549401 1 234651068 234651379 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738198,nssv738197,nssv738196,nssv738195,nssv738194,nssv738188,nssv738187,nssv738186,nssv738185,nssv738191,nssv738193,nssv738190,nssv738189,nssv738192,nssv738203,nssv738199,nssv738202,nssv738201,nssv738200 M 17421 0 19 EDARADD nsv549402 1 234651068 234651734 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738204 M 17421 0 1 EDARADD esv5800 1 234661340 234662058 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28241 M 1 0 0 EDARADD nsv159414 1 234661563 234661887 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177992 M 24 EDARADD nsv516855 1 234665731 234854412 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv684990,nssv654460,nssv683069,nssv659604,nssv658486 M 2026 5 0 EDARADD,HEATR1,LGALS8,LGALS8-AS1 dgv60n27 1 234670834 234848562 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv468461,nsv468472 M 1557 2 0 EDARADD,HEATR1,LGALS8,LGALS8-AS1 HGDP00021,HGDP01202 nsv549403 1 234670834 234848562 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174064,nssv1174063 M 17421 2 0 EDARADD,HEATR1,LGALS8,LGALS8-AS1 HGDP00021,HGDP01202 esv2762227 1 234670834 234853096 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7007018 M 1109 1 0 EDARADD,HEATR1,LGALS8,LGALS8-AS1 RW_0312 dgv591n100 1 234672456 234856750 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006798,nsv1000668,nsv1014662,nsv998581 M 29084 4 0 EDARADD,HEATR1,LGALS8,LGALS8-AS1 esv2598617 1 234727882 234728210 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5219672 M 1 1 0 "" NA18507 esv1610037 1 234728137 234728137 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4105077 M 2 1 0 "" HuRef nsv1003900 1 234730285 234754707 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485934 M 29084 1 0 LGALS8,LGALS8-AS1 nsv998009 1 234737414 234879020 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498574 M 29084 1 0 HEATR1,LGALS8,LGALS8-AS1 nsv475491 1 234767259 234767259 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017272 M 9 1 0 LGALS8 NA19240 nsv549404 1 234767605 234769525 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738205 M 17421 0 1 LGALS8 esv24676 1 234768471 234770388 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14371,esv15756,esv18577 M 40 0 5 LGALS8 NA07037,NA12239,NA12776,NA12878,NA15510 esv995705 1 234768471 234788319 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586311 M 3 1 0 HEATR1,LGALS8 HuRef nsv549405 1 234768740 234769525 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738209,nssv738207,nssv738208,nssv738206 M 17421 0 4 LGALS8 dgv864n54 1 234769351 234769581 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549408,nsv549407,nsv549406 M 17421 0 634 LGALS8 esv2002103 1 234789781 234790184 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4946157 M 1 0 1 HEATR1 NA18507 dgv592n100 1 234854429 234868716 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008225,nsv997406 M 29084 2 0 "" esv3413679 1 234856293 234856301 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863837 M 185 1 0 "" NA12005 nsv4988 1 234929087 234990306 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5036,nssv2788,nssv3843,nssv10547,nssv6197 M 9 5 0 ACTN2 NA12156,NA12878,NA18555,NA18956,NA19129 esv2759006 1 234933459 234968987 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756888 M 270 0 2 ACTN2 NA10855,NA11832 nsv510599 1 234938531 234951630 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618637 M 4 0 0 ACTN2 CHM nsv8924 1 234942342 234946131 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv22748,nssv23989,nssv27942,nssv27285,nssv25717,nssv27513,nssv22744,nssv24588,nssv25467,nssv27145,nssv25697,nssv22747,nssv27296,nssv22415,nssv24889 M 31 1 14 ACTN2 NA07029,NA10847,NA10863,NA12155,NA12740,NA12802,NA18502,NA18504,NA18517,NA18564,NA18942,NA19132,NA19173,NA19221,NA19240 nsv509690 1 234942788 234951630 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619829,nssv623816 M 4 2 0 ACTN2 NA10860,NA18994 dgv318e59 1 234943352 234945050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3406534,esv3389665,esv3337760,esv3368260 M 185 4 0 ACTN2 NA12878,NA12891,NA12892,NA19238 nsv820994 1 234943475 234945261 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421046 M 1 0 1 ACTN2 NA10851 nsv499679 1 234943517 234944988 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv585601 M 9 1 0 ACTN2 esv995766 1 234943578 234944924 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586118 M 3 0 1 ACTN2 HuRef esv28532 1 234943578 234944997 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17607 M 40 2 11 ACTN2 NA12287,NA18502,NA18505,NA18508,NA18511,NA18861,NA18907,NA18909,NA19099,NA19114,NA19147,NA19225,NA19240 dgv865n54 1 234943599 234944891 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549411,nsv549410,nsv549409 M 17421 0 8 ACTN2 nsv1013895 1 234946442 234957404 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705534 M 29084 0 1 ACTN2 nsv509702 1 234960842 234960842 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621113 M 4 1 0 ACTN2 NA15510 nsv428335 1 234964582 235143595 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv453175 M 62 1 0 ACTN2,MTR NA19113 esv2762180 1 234966641 234967160 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005922 M 1109 1 0 ACTN2 SW_0789 esv2762228 1 234966641 234967160 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007019 M 1109 0 1 ACTN2 RW_0175 nsv4999 1 234967222 235012146 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1778 M 9 0 1 ACTN2 NA18555 esv2649810 1 234980724 234982196 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5352231 M 1 0 1 ACTN2 NA18507 nsv477681 1 234983766 234983766 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011044 M 9 1 0 ACTN2 NA18517 nsv511744 1 234985292 234987277 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626390 M 1 0 1 ACTN2 1 esv2641685 1 234985413 234987504 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5370067 M 1 0 1 ACTN2 NA18507 esv2005187 1 234985520 234986394 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4734663 M 1 0 1 ACTN2 NA18507 esv25038 1 234985539 234987149 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16401 M 40 22 0 ACTN2 NA12489,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv820436 1 234985539 234987234 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421057 M 1 0 1 ACTN2 NA10851 esv1082367 1 234985776 234985825 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4258434 M 2 0 1 ACTN2 HuRef esv1676660 1 234986330 234986477 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3717009 M 2 0 1 ACTN2 HuRef esv1209958 1 234986771 234987065 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4152591 M 2 0 1 ACTN2 HuRef esv275031 1 234991515 234995748 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585820 M 1250 0 1 ACTN2 nsv522602 1 235004990 235006018 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705993 M 2026 0 1 "" nsv5010 1 235026274 235040650 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3844 M 9 1 0 MTR NA12878 nsv945385 1 235048003 235054170 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1823943,nssv1823982,nssv1823936,nssv1823915,nssv1823947,nssv1823901,nssv1823988,nssv1823909,nssv1823937,nssv1823976,nssv1823933,nssv1823920,nssv1823924,nssv1823929,nssv1823949,nssv1823919,nssv1823966,nssv1823927,nssv1823939,nssv1823926,nssv1823990,nssv1823980,nssv1823958,nssv1823981,nssv1823960,nssv1823977,nssv1823952,nssv1823978,nssv1823986,nssv1823975,nssv1823942,nssv1823904,nssv1823956,nssv1823922,nssv1823965,nssv1823903,nssv1823968,nssv1823979,nssv1823934,nssv1823902,nssv1823974,nssv1823907,nssv1823993,nssv1823908,nssv1823930,nssv1823913,nssv1823948,nssv1823914,nssv1823932,nssv1823983,nssv1823944,nssv1823984,nssv1823985,nssv1823918,nssv1823962,nssv1823906,nssv1823973,nssv1823905,nssv1823925,nssv1823900,nssv1823992,nssv1823910,nssv1823970,nssv1823916,nssv1823989,nssv1823899,nssv1823951,nssv1823911,nssv1823959,nssv1823917,nssv1823923,nssv1823912,nssv1823940,nssv1823938,nssv1823928,nssv1823964,nssv1823991,nssv1823955,nssv1823969,nssv1823957,nssv1823946,nssv1823963,nssv1823972,nssv1823945,nssv1823971,nssv1823953,nssv1823987,nssv1823931,nssv1823954,nssv1823921,nssv1823941,nssv1823967,nssv1823994,nssv1823950,nssv1823961,nssv1823898,nssv1823935 M 97 10 0 MTR HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv5021 1 235073402 235098695 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8212 M 9 0 1 MTR NA12156 nsv1009390 1 235183195 235199496 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487154 M 29084 1 0 "" nsv8935 1 235186315 235201056 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25169 M 31 1 0 "" NA18504 dgv61n27 1 235190394 235199343 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv468494,nsv468483 M 1557 2 0 "" HGDP00940,HGDP01200 dgv866n54 1 235190394 235199343 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549412,nsv549413 M 17421 2 0 "" HGDP00940,HGDP01200 nsv528602 1 235190394 235199343 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705228 M 2026 1 0 "" nsv818844 1 235190394 235199343 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417825 M 112 1 0 "" NA18852 nsv441743 1 235190798 235198134 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656911,nssv1656912,nssv1656914,nssv1656913 M 270 4 0 "" NA18503,NA18504,NA18852,NA18912 esv2764206 1 235190802 235199496 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7007021,essv7007020 M 1109 2 0 "" RW_0036,RW_0614 nsv516612 1 235195958 235197963 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689999,nssv669541 M 2026 0 2 "" esv34411 1 235198138 235199582 CNV gain Pinto_et_al_2007 17911159 SNP array essv6979990,essv6979989 M 771 2 0 "" NA18912 esv2759007 1 235198734 235212541 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756889 M 270 1 0 "" NA18503 nsv945386 1 235210827 235211926 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824079,nssv1824069,nssv1824072,nssv1824065,nssv1824017,nssv1824058,nssv1824023,nssv1824067,nssv1824026,nssv1824047,nssv1824074,nssv1824055,nssv1824073,nssv1824051,nssv1824006,nssv1824064,nssv1824078,nssv1823995,nssv1824015,nssv1824085,nssv1824075,nssv1824063,nssv1824019,nssv1824083,nssv1824002,nssv1824046,nssv1824080,nssv1824049,nssv1824000,nssv1824087,nssv1824024,nssv1824048,nssv1824076,nssv1824034,nssv1824010,nssv1824053,nssv1824008,nssv1824057,nssv1824011,nssv1824062,nssv1823997,nssv1824031,nssv1823996,nssv1824039,nssv1824016,nssv1824029,nssv1824004,nssv1824045,nssv1824081,nssv1824027,nssv1824003,nssv1824041,nssv1823998,nssv1824036,nssv1824013,nssv1824082,nssv1824005,nssv1824032,nssv1824001,nssv1824018,nssv1824012,nssv1824033,nssv1824009,nssv1824090,nssv1824014,nssv1824089,nssv1824007,nssv1824038,nssv1823999,nssv1824059,nssv1824077,nssv1824086,nssv1824070,nssv1824071,nssv1824030,nssv1824025,nssv1824044,nssv1824022,nssv1824061,nssv1824040,nssv1824043,nssv1824054,nssv1824084,nssv1824060,nssv1824066,nssv1824037,nssv1824068,nssv1824028,nssv1824042,nssv1824056,nssv1824035,nssv1824091,nssv1824088,nssv1824020,nssv1824050,nssv1824052,nssv1824021 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2468879 1 235228915 235229154 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5233470 M 1 0 1 "" NA18507 nsv1000707 1 235249035 235589635 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485044 M 29084 1 0 RYR2 nsv1013771 1 235294366 235393102 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495202 M 29084 0 1 RYR2 nsv468506 1 235344140 235345763 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543625 M 1557 0 1 RYR2 HGDP00527 nsv549414 1 235344140 235345763 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174067 M 17421 0 1 RYR2 HGDP00527 nsv832982 1 235350263 235511245 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441737 M 95 1 0 RYR2 nsv549415 1 235358771 236013587 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738852 M 17421 1 0 RYR2 esv3891248 1 235362854 235404273 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797763 M 3017 0 1 RYR2 nsv520100 1 235376762 235388592 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697223 M 2026 0 1 RYR2 nsv521224 1 235388537 235388592 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv686062,nssv687200 M 2026 0 2 RYR2 nsv476901 1 235396402 235396402 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020499 M 9 1 0 RYR2 NA12878 nsv516399 1 235409270 235409750 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv659519,nssv661736,nssv668041,nssv700968,nssv656534,nssv684386,nssv672884,nssv690384,nssv673662 M 2026 0 9 RYR2 nsv5032 1 235449507 235453279 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2792 M 9 1 0 RYR2 NA18555 nsv160668 1 235511856 235511856 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179246 M 24 RYR2 esv1753526 1 235516483 235516483 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4136827 M 2 1 0 RYR2 HuRef nsv1006191 1 235599325 235783193 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486675 M 29084 1 0 RYR2 esv5892 1 235632471 235633076 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv28333 M 1 0 0 RYR2 esv3306728 1 235635817 235635818 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7821874,essv7815674,essv7804750,essv7781301,essv7833297,essv7785860,essv7788752,essv7810375,essv7827746,essv7773442,essv7773709,essv7828197,essv7819181,essv7786599,essv7795592,essv7796715,essv7784012,essv7831128,essv7808682,essv7781727,essv7813224,essv7822684,essv7811583,essv7777851,essv7790948,essv7814660,essv7789023,essv7830369,essv7799375,essv7791596,essv7797727,essv7835921,essv7772331,essv7777032,essv7807352,essv7830819,essv7829256,essv7803466,essv7784343,essv7772944,essv7786882,essv7770811,essv7822547,essv7770454,essv7789859,essv7809952,essv7813888,essv7790160,essv7781063,essv7770917,essv7800630,essv7835535,essv7817811,essv7812669,essv7775725,essv7782841,essv7795996,essv7824149,essv7793543,essv7791020,essv7820055,essv7784994,essv7797901,essv7816870,essv7780706,essv7827074,essv7779872,essv7808019 M 185 68 0 RYR2 NA06986,NA07000,NA10847,NA10851,NA11829,NA11830,NA11919,NA11920,NA11931,NA11992,NA11993,NA11994,NA12003,NA12006,NA12144,NA12234,NA12287,NA12414,NA12716,NA12749,NA12750,NA12761,NA12815,NA12828,NA12872,NA12874,NA12878,NA12891,NA12892,NA18499,NA18505,NA18517,NA18542,NA18547,NA18550,NA18552,NA18555,NA18561,NA18562,NA18564,NA18566,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18593,NA18605,NA18609,NA18638,NA18940,NA18943,NA18944,NA18948,NA18949,NA18951,NA18959,NA18960,NA18964,NA18965,NA18969,NA18980,NA19093,NA19108,NA19114,NA19190,NA19238 esv3436973 1 235635819 235635830 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903750,essv8903726,essv8903756,essv8903748,essv8903753,essv8903700,essv8903732,essv8903737,essv8903740,essv8903730,essv8903741,essv8903717,essv8903702,essv8903699,essv8903696,essv8903742,essv8903743,essv8903722,essv8903718,essv8903709,essv8903712,essv8903713,essv8903733,essv8903735,essv8903701,essv8903754,essv8903707,essv8903706,essv8903755,essv8903710,essv8903738,essv8903723,essv8903711,essv8903716,essv8903708,essv8903759,essv8903752,essv8903715,essv8903749,essv8903697,essv8903757,essv8903734,essv8903744,essv8903704,essv8903746,essv8903727,essv8903751,essv8903728,essv8903731,essv8903729,essv8903724,essv8903739,essv8903745,essv8903721,essv8903705,essv8903719,essv8903698,essv8903720 M 185 58 0 RYR2 NA06986,NA07000,NA10847,NA10851,NA11829,NA11830,NA11919,NA11920,NA11931,NA11992,NA11993,NA11994,NA12003,NA12006,NA12144,NA12414,NA12716,NA12749,NA12750,NA12761,NA12828,NA18499,NA18505,NA18517,NA18542,NA18547,NA18550,NA18552,NA18555,NA18561,NA18562,NA18564,NA18566,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18593,NA18605,NA18609,NA18638,NA18940,NA18943,NA18944,NA18948,NA18949,NA18951,NA18959,NA18960,NA18964,NA18965,NA18980,NA19093,NA19108,NA19114,NA19190 esv3309777 1 235635823 235635824 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840694,essv7842409,essv7839786,essv7841204 M 185 4 0 RYR2 NA12878,NA12891,NA12892,NA19238 esv3445581 1 235635831 235635837 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673971,essv8673973,essv8673972,essv8673974 M 185 4 0 RYR2 NA12878,NA12891,NA12892,NA19238 nsv523073 1 235649381 235653007 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698762 M 2026 0 1 RYR2 nsv524393 1 235669263 235670476 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700311 M 2026 0 1 RYR2 esv1451750 1 235745660 235745660 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3914076 M 2 1 0 RYR2 HuRef esv2136360 1 235808466 235808836 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4980971 M 1 0 1 RYR2 NA18507 nsv159991 1 235808611 235808674 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178569 M 24 RYR2 nsv160537 1 235808679 235808742 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179115 M 24 RYR2 esv24945 1 235820675 235821523 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12305 M 40 0 1 RYR2 NA18909 nsv827498 1 235861666 235862442 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431133 M 31 1 0 RYR2 AK18 nsv474127 1 235947971 235947971 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020373 M 9 1 0 RYR2 NA18507 esv8781 1 235949822 235949986 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31222 M 1 0 0 RYR2 nsv1004084 1 235949851 236079393 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487623 M 29084 1 0 RYR2 esv2759008 1 236008417 236834725 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757777,esv2756890 M 270 1 0 LINC01139,LOC100130331,RYR2,ZP4 NA18633 nsv820221 1 236014314 236014670 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418848 M 2 1 0 RYR2 AK1 esv3398643 1 236019429 236019429 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823858 M 185 1 0 RYR2 NA12878 esv1756390 1 236019448 236019448 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3602135 M 2 1 0 RYR2 HuRef nsv8946 1 236030187 236032800 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv27275,nssv28025,nssv25177 M 31 3 0 RYR2 NA12155,NA18860,NA19221 esv3307698 1 236034235 236034236 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7769809,essv7765216,essv7765479,essv7767508,essv7768892,essv7764157,essv7764465,essv7766460,essv7767026,essv7767904 M 185 10 0 RYR2 NA11840,NA11894,NA12249,NA12287,NA12814,NA12874,NA12878,NA12892,NA18970,NA19238 esv3307981 1 236034237 236034238 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841270,essv7842316,essv7839964 M 185 3 0 RYR2 NA12878,NA12892,NA19238 esv3342405 1 236034242 236034254 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673977,essv8673978,essv8673975 M 185 3 0 RYR2 NA12878,NA12892,NA19238 nsv1000577 1 236056225 236083873 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500658 M 29084 1 0 RYR2 nsv827509 1 236061654 236062285 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436397 M 31 0 1 RYR2 NA18542 esv34468 1 236079393 236792582 CNV gain Pinto_et_al_2007 17911159 SNP array essv6979804,essv6986949,essv6986950,essv6979803,essv6979802 M 771 5 0 LINC01139,LOC100130331,ZP4 NA18633 nsv474288 1 236102929 236102929 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010791 M 9 1 0 LOC100130331 NA18507 nsv832993 1 236152656 236328485 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441738 M 95 0 1 LOC100130331 nsv8957 1 236170223 236176408 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv22743,nssv21410 M 31 0 2 "" NA10847,NA18853 nsv945387 1 236170978 236181415 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824105,nssv1825552,nssv1825606,nssv1825566,nssv1825551,nssv1825616,nssv1824093,nssv1825562,nssv1824095,nssv1825617,nssv1825600,nssv1825564,nssv1825543,nssv1825559,nssv1824101,nssv1825567,nssv1825604,nssv1824092,nssv1824098,nssv1825565,nssv1825544,nssv1825579,nssv1824099,nssv1825557,nssv1824107,nssv1825612,nssv1824103,nssv1825615,nssv1825602,nssv1825594,nssv1825605,nssv1825549,nssv1824094,nssv1825609,nssv1824097,nssv1825572,nssv1824096,nssv1825590,nssv1825546,nssv1825582,nssv1824104,nssv1825548,nssv1825553,nssv1825574,nssv1825603,nssv1825563,nssv1825550,nssv1825598,nssv1825538,nssv1825595,nssv1825599,nssv1825580,nssv1824100,nssv1825591,nssv1825607,nssv1825554,nssv1825542,nssv1825613,nssv1825608,nssv1825560,nssv1825601,nssv1825577,nssv1825540,nssv1825586,nssv1825539,nssv1825573,nssv1824102,nssv1825587,nssv1824106,nssv1825593,nssv1825541,nssv1825589,nssv1825610,nssv1825558,nssv1825581,nssv1825561,nssv1825570,nssv1825585,nssv1825556,nssv1825568,nssv1825618,nssv1825555,nssv1825578,nssv1825597,nssv1825596,nssv1825592,nssv1825588,nssv1825584,nssv1825583,nssv1825575,nssv1825571,nssv1825547,nssv1825569,nssv1825576,nssv1825614,nssv1825611,nssv1825545 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26929 1 236176893 236181505 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11981 M 40 0 1 "" NA19108 nsv471615 1 236250319 236400935 CNV gain+loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv549249,nssv549248,nssv549247,nssv549251,nssv549245,nssv549246,nssv549250 M 48 4 3 "" NA10470,NA10471,NA10496,NA15724,NA15727,NA15731,NA17059 esv2442382 1 236280996 236282029 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5214315 M 1 1 0 "" NA18507 nsv945388 1 236300320 236300997 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1825703,nssv1825686,nssv1825647,nssv1825713,nssv1825650,nssv1825680,nssv1825701,nssv1825708,nssv1825633,nssv1825681,nssv1825629,nssv1825663,nssv1825630,nssv1825670,nssv1825697,nssv1825714,nssv1825641,nssv1825659,nssv1825696,nssv1825711,nssv1825632,nssv1825682,nssv1825699,nssv1825658,nssv1825702,nssv1825666,nssv1825631,nssv1825661,nssv1825628,nssv1825707,nssv1825643,nssv1825656,nssv1825624,nssv1825712,nssv1825622,nssv1825676,nssv1825634,nssv1825709,nssv1825620,nssv1825664,nssv1825627,nssv1825646,nssv1825700,nssv1825694,nssv1825626,nssv1825649,nssv1825635,nssv1825691,nssv1825621,nssv1825710,nssv1825640,nssv1825692,nssv1825623,nssv1825673,nssv1825705,nssv1825706,nssv1825625,nssv1825671,nssv1825698,nssv1825683,nssv1825648,nssv1825677,nssv1825637,nssv1825688,nssv1825636,nssv1825695,nssv1825639,nssv1825679,nssv1825638,nssv1825687,nssv1825704,nssv1825654,nssv1825674,nssv1825651,nssv1825657,nssv1825669,nssv1825653,nssv1825690,nssv1825655,nssv1825652,nssv1825662,nssv1825684,nssv1825645,nssv1825715,nssv1825619,nssv1825672,nssv1825678,nssv1825675,nssv1825667,nssv1825665,nssv1825644,nssv1825689,nssv1825642,nssv1825693,nssv1825668,nssv1825660,nssv1825685 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv468517 1 236300720 236354756 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543636 M 1557 0 1 "" 1780854299_A nsv549416 1 236300720 236354756 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174068 M 17421 0 1 "" 1780854299_A esv23946 1 236383366 236384747 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20025 M 40 0 1 "" NA18861 nsv5043 1 236388725 236420231 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10562 M 9 1 0 "" NA18956 nsv160395 1 236418293 236418382 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178973 M 24 "" nsv517981 1 236434231 236434992 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695393 M 2026 0 1 "" esv2422256 1 236508584 236714485 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161321 M 181 1 0 LINC01139 ND03770 nsv1004363 1 236525325 236541080 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488296 M 29084 1 0 "" nsv833004 1 236546393 236731426 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441739 M 95 0 1 LINC01139 nsv8968 1 236549542 236553482 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv20758 M 31 0 1 "" NA19144 nsv515516 1 236552164 236554542 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv658007,nssv653422,nssv668376 M 2026 0 3 "" nsv997894 1 236559505 236681838 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485677 M 29084 0 1 "" nsv549417 1 236576093 236601557 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738853 M 17421 0 1 "" nsv521612 1 236600123 236796887 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694466 M 2026 0 1 LINC01139 nsv1000950 1 236609952 236738917 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485285 M 29084 1 0 LINC01139 esv21542 1 236675676 236676635 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15904 M 40 0 1 "" NA18916 nsv468528 1 236682489 236719591 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543647 M 1557 0 1 LINC01139 HGDP00855 nsv549418 1 236682489 236719591 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174069 M 17421 0 1 LINC01139 HGDP00855 nsv549419 1 236682489 236750675 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738854 M 17421 0 1 LINC01139 nsv833015 1 236688056 236861593 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441742 M 95 0 1 LINC01139 nsv945389 1 236698791 236699850 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824369,nssv1824361,nssv1825717,nssv1824332,nssv1825744,nssv1824374,nssv1825747,nssv1824351,nssv1825718,nssv1825739,nssv1825745,nssv1825750,nssv1825722,nssv1824338,nssv1824363,nssv1825760,nssv1825726,nssv1825753,nssv1824365,nssv1824342,nssv1825719,nssv1824355,nssv1825738,nssv1824350,nssv1824364,nssv1824346,nssv1825729,nssv1824340,nssv1825730,nssv1824359,nssv1825727,nssv1824348,nssv1824367,nssv1825743,nssv1825721,nssv1824337,nssv1825740,nssv1825746,nssv1824368,nssv1825758,nssv1824362,nssv1824333,nssv1824366,nssv1825756,nssv1825725,nssv1825748,nssv1825723,nssv1824377,nssv1825731,nssv1824381,nssv1825732,nssv1824354,nssv1824371,nssv1825755,nssv1825720,nssv1824341,nssv1825737,nssv1824336,nssv1825724,nssv1824373,nssv1825728,nssv1825716,nssv1825734,nssv1824345,nssv1824370,nssv1825761,nssv1825733,nssv1825751,nssv1825736,nssv1824343,nssv1825735,nssv1824347,nssv1824378,nssv1825757,nssv1824353,nssv1824379,nssv1824352,nssv1824335,nssv1825762,nssv1824334,nssv1824344,nssv1824375,nssv1824358,nssv1825754,nssv1825742,nssv1824372,nssv1824349,nssv1824376,nssv1824339,nssv1825759,nssv1825741,nssv1825749,nssv1824360,nssv1824356,nssv1824380,nssv1825752,nssv1824357 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv593n100 1 236716368 236853403 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006459,nsv1013312,nsv1014823,nsv1007817,nsv1014562,nsv1007032,nsv1005647,nsv1014501,nsv1008492,nsv1010974,nsv1013766,nsv997755 M 29084 14 0 "" esv2760965 1 236716380 236850654 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005933,essv7005944 M 1109 2 0 "" SW_1057,SW_1309 nsv468550 1 236719591 236840429 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543668 M 1557 1 0 "" NINDS_212 dgv867n54 1 236719591 236846097 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549422,nsv549420,nsv549421 M 17421 4 0 "" NINDS_212 nsv945391 1 236720738 236726508 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824386,nssv1824759,nssv1824774,nssv1824754,nssv1824404,nssv1824763,nssv1824395,nssv1824758,nssv1824775,nssv1824784,nssv1824392,nssv1824735,nssv1824402,nssv1824408,nssv1824768,nssv1824749,nssv1824403,nssv1824734,nssv1824773,nssv1824741,nssv1824770,nssv1824780,nssv1824410,nssv1824412,nssv1824406,nssv1824785,nssv1824767,nssv1824744,nssv1824388,nssv1824738,nssv1824385,nssv1824781,nssv1824387,nssv1824777,nssv1824413,nssv1824726,nssv1824393,nssv1824733,nssv1824383,nssv1824731,nssv1824771,nssv1824750,nssv1824384,nssv1824729,nssv1824769,nssv1824736,nssv1824398,nssv1824405,nssv1824772,nssv1824765,nssv1824397,nssv1824415,nssv1824776,nssv1824407,nssv1824390,nssv1824382,nssv1824389,nssv1824724,nssv1824396,nssv1824742,nssv1824391,nssv1824409,nssv1824399,nssv1824783,nssv1824411,nssv1824756,nssv1824400,nssv1824766,nssv1824394,nssv1824761,nssv1824401,nssv1824740,nssv1824739,nssv1824753,nssv1824730,nssv1824732,nssv1824762,nssv1824760,nssv1824779,nssv1824755,nssv1824751,nssv1824728,nssv1824786,nssv1824747,nssv1824748,nssv1824737,nssv1824778,nssv1824743,nssv1824745,nssv1824764,nssv1824782,nssv1824746,nssv1824725,nssv1824414,nssv1824752,nssv1824727,nssv1824757 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1002397 1 236721178 236808175 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501400 M 29084 0 1 "" nsv436204 1 236757562 236767971 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465880 M 2 0 1 "" NA18505 nsv159463 1 236769991 236771595 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178041 M 24 "" nsv525909 1 236772552 236773344 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702113 M 2026 0 1 "" nsv1003215 1 236789152 236864867 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488191 M 29084 1 0 "" nsv471775 1 236817115 236819235 CNV loss Hinds_et_al_2006 16327809 Oligo aCGH,PCR nssv646056 M 95 "" esv26208 1 236817476 236818661 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16764 M 40 0 5 "" NA15510,NA18502,NA18517,NA19108,NA19257 dgv868n54 1 236817568 236818560 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549424,nsv549423 M 17421 0 5 "" esv999826 1 236817783 236818251 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587276 M 3 1 0 "" HuRef nsv1014607 1 236821992 236842448 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497860 M 29084 0 1 "" nsv470782 1 236824683 236846513 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544422 M 443 0 1 "" HGDP01223 esv1677184 1 236871795 236871795 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3665429 M 2 1 0 "" HuRef esv1288847 1 236871825 236871825 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4184947 M 2 1 0 "" HuRef nsv833026 1 236872743 236995520 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441743 M 95 0 1 "" esv2762181 1 236915548 236954402 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005955 M 1109 0 1 "" SW_1384 esv2762229 1 236915548 237053346 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007023 M 1109 0 1 "" RW_0359 esv2535134 1 236918507 236920526 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5281777 M 1 0 1 "" NA18507 esv2303288 1 236918763 236920072 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4805549 M 1 0 1 "" NA18507 esv7940 1 236918783 236920133 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30381 M 1 0 0 "" nsv514920 1 236918864 236921776 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2856023,nssv2856028,nssv2856018,nssv2856033,nssv2856029,nssv2856027,nssv2856021,nssv2856024,nssv2856020,nssv2856031,nssv2856019,nssv2856032,nssv2856030,nssv2856026,nssv2856022,nssv2856034,nssv2856025 M 2366 16 1 "" NA12004,NA12056,NA12329,NA12489,NA12877,NA12891,NA12892,NA18522,NA18582,NA18859,NA19093,NA19141,NA19152,NA19239,NA19248,NA21361,NA21389 esv3214 1 236918884 236920062 CNV loss Wang_et_al_2008 18987735 Sequencing essv25655 M 1 0 1 "" YH nsv442620 1 236918890 236922717 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1619894,nssv1619871,nssv1619835,nssv1619893,nssv1619905,nssv1619901,nssv1619923,nssv1619888,nssv1619944,nssv1619927,nssv1619861,nssv1619880,nssv1619878,nssv1619932,nssv1619906,nssv1619851,nssv1619870,nssv1619921,nssv1619942,nssv1619946,nssv1619848,nssv1619920,nssv1619928,nssv1619899,nssv1619840,nssv1619892,nssv1619945,nssv1619909,nssv1619949,nssv1619841,nssv1619837,nssv1619947,nssv1619834,nssv1619868,nssv1619943,nssv1619882,nssv1619900,nssv1619903,nssv1619919,nssv1619849,nssv1619924,nssv1619842,nssv1619912,nssv1619925,nssv1619874,nssv1619886,nssv1619847,nssv1619831,nssv1619869,nssv1619935,nssv1619938,nssv1619926,nssv1619876,nssv1619939,nssv1619881,nssv1619875,nssv1619922,nssv1619844,nssv1619934,nssv1619856,nssv1619845,nssv1619952,nssv1619937,nssv1619885,nssv1619833,nssv1619911,nssv1619839,nssv1619865,nssv1619950,nssv1619896,nssv1619866,nssv1619883,nssv1619931,nssv1619838,nssv1619879,nssv1619862,nssv1619858,nssv1619897,nssv1619891,nssv1619936,nssv1619867,nssv1619933,nssv1619907,nssv1619877,nssv1619863,nssv1619918,nssv1619914,nssv1619852,nssv1619836,nssv1619855,nssv1619940,nssv1619854,nssv1619887,nssv1619846,nssv1619951,nssv1619850,nssv1619890,nssv1619908,nssv1619860,nssv1619948,nssv1619889,nssv1619904,nssv1619930,nssv1619915,nssv1619864,nssv1619916,nssv1619872,nssv1619895,nssv1619853,nssv1619832,nssv1619941,nssv1619898,nssv1619859,nssv1619857,nssv1619843,nssv1619884,nssv1619873,nssv1619910,nssv1619913,nssv1619917,nssv1619902,nssv1619929 M 270 0 122 "" NA07019,NA07022,NA07029,NA07034,NA07345,NA07348,NA10835,NA10846,NA10847,NA10856,NA10857,NA10860,NA10861,NA11829,NA11831,NA11881,NA11882,NA11993,NA11994,NA12043,NA12057,NA12146,NA12239,NA12249,NA12740,NA12752,NA12753,NA12761,NA12762,NA12763,NA12814,NA12815,NA12864,NA12872,NA18500,NA18502,NA18506,NA18507,NA18515,NA18516,NA18517,NA18521,NA18522,NA18523,NA18526,NA18529,NA18545,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18572,NA18592,NA18593,NA18594,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18624,NA18632,NA18633,NA18636,NA18637,NA18855,NA18856,NA18857,NA18858,NA18860,NA18862,NA18863,NA18913,NA18914,NA18942,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18959,NA18960,NA18964,NA18965,NA18967,NA18968,NA18969,NA18970,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18990,NA18991,NA18992,NA18995,NA18998,NA19003,NA19007,NA19101,NA19103,NA19116,NA19120,NA19128,NA19131,NA19138,NA19139,NA19153,NA19172,NA19192,NA19194,NA19204,NA19208,NA19221,NA19223 nsv518798 1 236920060 236922050 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694067 M 2026 0 1 "" nsv827520 1 236920856 236922980 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440878 M 31 0 1 "" NA18969 esv21908 1 236921617 236922722 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14140 M 40 0 1 "" NA18517 esv275214 1 236985036 236985355 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585293 M 1250 0 1 "" nsv549425 1 236993444 237019245 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738863 M 17421 1 0 "" nsv1014709 1 236995342 237079798 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498004 M 29084 0 1 "" nsv549426 1 236996976 237019121 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738865,nssv738864,nssv738866 M 17421 1 2 "" dgv869n54 1 236996976 237019245 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549427,nsv549428 M 17421 0 2 "" nsv470784 1 236997482 237019245 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544423 M 443 0 1 "" HGDP00903 nsv506985 1 237066514 237072514 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617552 M 4 0 0 "" CHM nsv549429 1 237069644 237185542 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738869 M 17421 0 1 "" nsv5054 1 237073109 237117362 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1784 M 9 0 1 "" NA18555 nsv468583 1 237127583 237157563 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543696 M 1557 0 1 "" HGDP00326 dgv870n54 1 237127583 237161470 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549431,nsv549430 M 17421 0 2 "" HGDP00321,HGDP00326 nsv818855 1 237141880 237146096 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417175 M 112 0 1 "" NA18550 esv2762182 1 237148370 237162653 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005967 M 1109 0 1 "" SW_0021 nsv468594 1 237152806 237186990 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543701 M 1557 0 1 "" HGDP01238 nsv549432 1 237152806 237186990 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174073 M 17421 0 1 "" HGDP01238 nsv1010183 1 237152997 237203366 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491893 M 29084 0 1 "" nsv468605 1 237176666 237222993 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543708 M 1557 0 1 "" 1780862432_A nsv549433 1 237176666 237222993 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174074 M 17421 0 1 "" 1780862432_A nsv1006851 1 237208206 237288395 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705541 M 29084 0 1 "" nsv470785 1 237214414 237239406 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544424 M 443 0 1 "" HGDP00566 nsv1002301 1 237248878 237841016 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501285 M 29084 1 0 "" esv1003006 1 237279164 237279992 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586601 M 3 0 1 "" HuRef nsv945392 1 237282132 237283724 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824864,nssv1824837,nssv1824871,nssv1824879,nssv1824793,nssv1824855,nssv1824801,nssv1824826,nssv1824802,nssv1824824,nssv1824797,nssv1824820,nssv1824809,nssv1824856,nssv1824800,nssv1824830,nssv1824865,nssv1824842,nssv1824870,nssv1824810,nssv1824867,nssv1824835,nssv1824794,nssv1824881,nssv1824811,nssv1824839,nssv1824796,nssv1824860,nssv1824799,nssv1824851,nssv1824818,nssv1824813,nssv1824792,nssv1824874,nssv1824868,nssv1824882,nssv1824815,nssv1824828,nssv1824866,nssv1824819,nssv1824803,nssv1824838,nssv1824789,nssv1824846,nssv1824816,nssv1824877,nssv1824873,nssv1824823,nssv1824795,nssv1824814,nssv1824790,nssv1824831,nssv1824807,nssv1824832,nssv1824805,nssv1824878,nssv1824872,nssv1824821,nssv1824788,nssv1824817,nssv1824804,nssv1824833,nssv1824808,nssv1824847,nssv1824798,nssv1824862,nssv1824869,nssv1824848,nssv1824806,nssv1824840,nssv1824791,nssv1824844,nssv1824825,nssv1824853,nssv1824863,nssv1824849,nssv1824836,nssv1824859,nssv1824858,nssv1824852,nssv1824841,nssv1824829,nssv1824876,nssv1824857,nssv1824834,nssv1824875,nssv1824850,nssv1824843,nssv1824822,nssv1824861,nssv1824845,nssv1824787,nssv1824827,nssv1824883,nssv1824812,nssv1824880,nssv1824854 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1000227 1 237314591 237488449 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483067 M 29084 1 0 "" nsv1007912 1 237372832 237476794 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705542 M 29084 1 0 "" esv3380829 1 237384162 237384202 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903761,essv8903760,essv8903765,essv8903766,essv8903764,essv8903762,essv8903767,essv8903763 M 185 8 0 "" NA11831,NA12156,NA12717,NA18489,NA18545,NA18582,NA18609,NA18858 esv3306611 1 237384168 237384169 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760507,essv7746564,essv7751370,essv7762282,essv7757592,essv7745152,essv7762546,essv7757675 M 185 8 0 "" NA11831,NA12156,NA12717,NA18489,NA18545,NA18582,NA18609,NA18858 nsv549434 1 237417351 237631305 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738870 M 17421 1 0 "" dgv594n100 1 237422298 237631305 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001152,nsv1002418,nsv1013763 M 29084 4 0 "" nsv1008640 1 237430631 237540769 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496864 M 29084 1 0 "" nsv549435 1 237441633 238040629 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738871 M 17421 1 0 CHRM3,CHRM3-AS2 esv3425671 1 237492878 237492887 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673979,essv8673980 M 185 2 0 "" NA19239,NA19240 esv3405830 1 237492885 237492897 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903806,essv8903784,essv8903815,essv8903807,essv8903794,essv8903809,essv8903805,essv8903812,essv8903802,essv8903796,essv8903783,essv8903782,essv8903788,essv8903808,essv8903779,essv8903791,essv8903790,essv8903810,essv8903801,essv8903773,essv8903800,essv8903774,essv8903772,essv8903778,essv8903795,essv8903797,essv8903768,essv8903777,essv8903813,essv8903786,essv8903804,essv8903811,essv8903776,essv8903770,essv8903775,essv8903785,essv8903787,essv8903771,essv8903793,essv8903789,essv8903799,essv8903798 M 185 42 0 "" NA07051,NA10851,NA11831,NA11894,NA11918,NA11993,NA12156,NA12249,NA12414,NA12776,NA18501,NA18502,NA18504,NA18507,NA18510,NA18511,NA18517,NA18520,NA18522,NA18523,NA18547,NA18552,NA18558,NA18561,NA18576,NA18856,NA18858,NA18861,NA18871,NA18909,NA18912,NA18916,NA18940,NA19099,NA19102,NA19108,NA19129,NA19137,NA19138,NA19190,NA19225,NA19257 nsv159281 1 237533073 237537732 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177859 M 24 "" nsv518880 1 237542363 237542548 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696339 M 2026 0 1 "" nsv833037 1 237588791 237766035 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441744 M 95 0 1 "" esv3383016 1 237641348 237642396 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652070 M 185 1 0 "" NA19240 esv3584614 1 237656846 237667786 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838218 M 34 0 1 "" KSF008 nsv549436 1 237698678 237744738 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738872 M 17421 0 1 "" nsv549437 1 237726576 237743627 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738873 M 17421 0 1 "" esv2759009 1 237832717 238456127 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756891,esv2757778 M 270 1 0 CHRM3,CHRM3-AS1,CHRM3-AS2,FMN2,RPS7P5 NA18566 nsv526244 1 237838077 237841293 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702516 M 2026 0 1 "" nsv549438 1 237841293 237878726 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738874,nssv738875 M 17421 2 0 CHRM3 esv2618187 1 237846157 237847190 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5277690 M 1 1 0 "" NA18507 esv3422902 1 237846756 237846778 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673981 M 185 1 0 "" NA19238 esv3308101 1 237846762 237846763 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838367,essv7839033,essv7837790,essv7837606,essv7838145,essv7836937 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv3304078 1 237846767 237846768 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7771083,essv7797123,essv7836261,essv7802131,essv7816928,essv7832427,essv7801249,essv7815843,essv7771678,essv7792296,essv7806713,essv7779488,essv7782767,essv7805478,essv7782838,essv7828181,essv7804243,essv7816169,essv7816997,essv7805844,essv7811945,essv7829669,essv7808684,essv7817943,essv7778546,essv7788053,essv7806862,essv7795206,essv7808261,essv7819447,essv7814211,essv7813063,essv7789545,essv7802707,essv7812488,essv7805185,essv7789147,essv7790718 M 185 38 0 "" NA07000,NA10847,NA10851,NA11920,NA12045,NA12155,NA12287,NA12489,NA12716,NA12717,NA12763,NA12873,NA18498,NA18499,NA18501,NA18502,NA18510,NA18511,NA18516,NA18517,NA18522,NA18523,NA18562,NA18573,NA18608,NA18856,NA18858,NA18870,NA18907,NA18909,NA18912,NA19102,NA19116,NA19143,NA19190,NA19210,NA19238,NA19257 esv3424508 1 237846770 237846789 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9599102,essv9599091 M 185 2 0 "" NA12873,NA19143 esv3340778 1 237846774 237846782 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903839,essv8903826,essv8903833,essv8903821,essv8903852,essv8903832,essv8903835,essv8903837,essv8903828,essv8903846,essv8903838,essv8903831,essv8903827,essv8903820,essv8903818,essv8903823,essv8903830,essv8903841,essv8903842,essv8903844,essv8903840,essv8903824,essv8903851,essv8903848,essv8903817,essv8903829,essv8903819,essv8903822,essv8903850,essv8903816,essv8903845,essv8903843,essv8903834,essv8903849 M 185 34 0 "" NA07000,NA10847,NA10851,NA11920,NA12045,NA12155,NA12489,NA12716,NA12717,NA12763,NA18498,NA18499,NA18501,NA18502,NA18510,NA18511,NA18516,NA18517,NA18522,NA18523,NA18562,NA18573,NA18608,NA18856,NA18858,NA18870,NA18907,NA18909,NA18912,NA19102,NA19116,NA19190,NA19210,NA19257 nsv549439 1 237851788 237866651 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738876 M 17421 0 1 CHRM3 nsv506986 1 237935669 237941669 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619265 M 4 0 0 CHRM3,CHRM3-AS2 NA10860 esv2376547 1 237962034 237962752 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4769218 M 1 0 1 CHRM3 NA18507 esv1778820 1 237962746 237962746 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3773431 M 2 1 0 CHRM3 HuRef esv35011 1 237974043 238365582 CNV gain Pinto_et_al_2007 17911159 SNP array essv6979532,essv6979531,essv6979530,essv6990377,essv6986880 M 771 5 0 CHRM3,CHRM3-AS1,FMN2,RPS7P5 NA18566 nsv827531 1 237981368 238366829 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1435704 M 31 1 0 CHRM3,CHRM3-AS1,FMN2,RPS7P5 NA18566 esv3891259 1 237991031 238366137 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25792791 M 3017 1 0 CHRM3,CHRM3-AS1,FMN2,RPS7P5 esv3373255 1 238020971 238020987 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863842 M 185 1 0 CHRM3 NA12005 nsv519393 1 238028625 238257211 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696830 M 2026 1 0 CHRM3,CHRM3-AS1,RPS7P5 esv5899 1 238068492 238068675 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28340 M 1 0 0 CHRM3 nsv5065 1 238074442 238076721 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1797 M 9 1 0 CHRM3 NA18555 nsv508067 1 238076903 238082903 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621491,nssv622307,nssv624236,nssv618526 M 4 0 0 CHRM3 CHM,NA10860,NA15510,NA18994 nsv473384 1 238141742 238141742 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014572 M 9 1 0 "" NA19129 esv9443 1 238169675 238226384 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv31884 M 1 0 0 "" nsv945393 1 238175417 238176144 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824893,nssv1824899,nssv1824891,nssv1824902,nssv1824886,nssv1824903,nssv1824890,nssv1824919,nssv1824885,nssv1824897,nssv1824904,nssv1824895,nssv1824914,nssv1824912,nssv1824930,nssv1824910,nssv1824931,nssv1824894,nssv1824923,nssv1824926,nssv1824921,nssv1824917,nssv1824905,nssv1824898,nssv1824913,nssv1824889,nssv1824908,nssv1824924,nssv1824884,nssv1824892,nssv1824922,nssv1824911,nssv1824906,nssv1824888,nssv1824918,nssv1824907,nssv1824896,nssv1824900,nssv1824927,nssv1824915,nssv1824928,nssv1824929,nssv1824925,nssv1824901,nssv1824909,nssv1824920,nssv1824887,nssv1824916 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2519244 1 238182420 238183515 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5350633 M 1 1 0 "" NA18507 esv2620874 1 238182583 238183492 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5192765 M 1 0 0 "" NA18507 esv6173 1 238182648 238183496 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv28614 M 1 0 0 "" esv3624 1 238182736 238182962 OTHER inversion Wang_et_al_2008 18987735 Sequencing essv26065 M 1 0 0 "" YH esv2261321 1 238189157 238189585 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4511711 M 1 0 1 "" NA18507 esv1117084 1 238189329 238189385 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3817385 M 2 0 1 "" HuRef nsv549440 1 238193916 238228344 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738877 M 17421 0 1 "" esv1413371 1 238205084 238205388 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3697058 M 2 0 1 "" HuRef nsv475824 1 238209340 238209340 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013218 M 9 1 0 "" NA12878 nsv945394 1 238222522 238223503 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824941,nssv1824971,nssv1824934,nssv1824973,nssv1824938,nssv1824977,nssv1824939,nssv1824957,nssv1824972,nssv1824948,nssv1824932,nssv1824952,nssv1824967,nssv1824951,nssv1824945,nssv1824950,nssv1824943,nssv1824947,nssv1824974,nssv1824958,nssv1824960,nssv1824964,nssv1824933,nssv1824962,nssv1824978,nssv1824942,nssv1824969,nssv1824953,nssv1824937,nssv1824936,nssv1824979,nssv1824954,nssv1824940,nssv1824955,nssv1824961,nssv1824944,nssv1824949,nssv1824946,nssv1824965,nssv1824970,nssv1824956,nssv1824959,nssv1824963,nssv1824935,nssv1824975,nssv1824966,nssv1824968,nssv1824976 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv519885 1 238237831 238240914 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697104 M 2026 1 0 RPS7P5 nsv827542 1 238242958 238243473 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434229 M 31 1 0 RPS7P5 NA18570 nsv1012980 1 238244718 238288609 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493976 M 29084 1 0 "" nsv827553 1 238245511 238246357 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423975 M 31 1 0 "" NA18968 nsv1007197 1 238248040 238276364 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492458 M 29084 1 0 "" esv2164746 1 238271140 238271561 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4993727 M 1 0 1 "" NA18507 esv25531 1 238285940 238291665 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12491 M 40 0 1 "" NA19129 nsv8979 1 238288314 238291671 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv27395 M 31 0 1 "" NA12155 dgv32n21 1 238291377 238292083 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv523248,nsv520537 M 2026 0 2 "" esv1922446 1 238369014 238369477 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4693144 M 1 0 1 FMN2 NA18507 nsv159120 1 238382242 238384030 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177698 M 24 FMN2 nsv945395 1 238400422 238401422 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824989,nssv1825435,nssv1825446,nssv1824980,nssv1825440,nssv1825019,nssv1825009,nssv1825021,nssv1824994,nssv1825434,nssv1824982,nssv1825437,nssv1825439,nssv1825422,nssv1825002,nssv1825431,nssv1824995,nssv1825017,nssv1825001,nssv1825027,nssv1824993,nssv1825005,nssv1825443,nssv1825414,nssv1825442,nssv1825018,nssv1825011,nssv1825426,nssv1825445,nssv1825430,nssv1824985,nssv1825438,nssv1825447,nssv1825417,nssv1824986,nssv1825455,nssv1825004,nssv1825420,nssv1824990,nssv1825433,nssv1824987,nssv1825013,nssv1824996,nssv1825436,nssv1824992,nssv1825416,nssv1824984,nssv1825003,nssv1824991,nssv1825020,nssv1825448,nssv1825022,nssv1825441,nssv1825015,nssv1825008,nssv1825458,nssv1824988,nssv1825030,nssv1825000,nssv1825427,nssv1825444,nssv1825429,nssv1824997,nssv1825007,nssv1824999,nssv1825451,nssv1824981,nssv1825016,nssv1824983,nssv1825449,nssv1824998,nssv1825028,nssv1825031,nssv1825012,nssv1825432,nssv1825418,nssv1825023,nssv1825428,nssv1825026,nssv1825024,nssv1825415,nssv1825010,nssv1825450,nssv1825421,nssv1825423,nssv1825424,nssv1825014,nssv1825454,nssv1825456,nssv1825425,nssv1825457,nssv1825419,nssv1825025,nssv1825453,nssv1825452,nssv1825006,nssv1825029 M 97 10 0 FMN2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509713 1 238413753 238429832 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623817,nssv621114 M 4 2 0 FMN2 NA15510,NA18994 esv3412286 1 238414881 238415024 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808953 M 185 1 0 FMN2 NA12878 nsv499240 1 238414956 238415042 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv586173 M 9 1 0 FMN2 esv1641435 1 238415127 238415127 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3831569 M 2 1 0 FMN2 HuRef nsv520710 1 238420692 238424260 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv687996,nssv674381 M 2026 2 0 FMN2 nsv821622 1 238429482 238461503 CNV loss Sebat_et_al_2004 15273396 ROMA nssv1421224 M 31 0 1 FMN2 esv1783439 1 238437863 238437863 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3690168 M 2 1 0 FMN2 HuRef nsv549441 1 238448650 238461003 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738878 M 17421 0 1 FMN2 nsv549442 1 238455099 238461337 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv738879 M 17421 0 1 FMN2 esv988900 1 238458127 238463308 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565623 M 3 0 1 FMN2 HuRef nsv511745 1 238458699 238461443 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626391 M 1 0 1 FMN2 1 esv2655283 1 238459114 238462341 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5215453 M 1 0 1 FMN2 NA18507 nsv8992 1 238459333 238461770 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23996,nssv25726,nssv25457,nssv25449,nssv23061,nssv24003,nssv21088,nssv27623,nssv23072,nssv26182,nssv27416,nssv27011,nssv27507,nssv28110,nssv22105,nssv25962,nssv24903,nssv23065,nssv28303,nssv21770,nssv23381 M 31 0 21 FMN2 NA10839,NA10847,NA12155,NA12740,NA18504,NA18517,NA18537,NA18552,NA18563,NA18572,NA18853,NA18860,NA18942,NA18972,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 esv6586 1 238459364 238461616 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29027 M 1 0 0 FMN2 esv2413252 1 238459445 238461567 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4532482 M 1 0 1 FMN2 NA18507 dgv112n67 1 238459681 238461392 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827564,nsv827575 M 31 0 11 FMN2 AK12,AK14,AK20,AK4,NA18526,NA18537,NA18542,NA18552,NA18582,NA18942,NA18969 dgv12e180 1 238459681 238461517 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1008576,esv1010156 M 3 0 1 FMN2 HuRef esv28231 1 238459885 238461481 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14223 M 40 0 25 FMN2 NA07037,NA07045,NA11931,NA11995,NA12239,NA12287,NA12828,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 dgv871n54 1 238460384 238461157 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549445,nsv549443,nsv549444,nsv549449,nsv549450 M 17421 0 34 FMN2 dgv872n54 1 238460384 238461502 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549446,nsv549447,nsv549451 M 17421 0 206 FMN2 dgv873n54 1 238460384 238469018 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549448,nsv549452 M 17421 0 2 FMN2 esv2421851 1 238460638 238461003 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5078883,essv5064544,essv5082552,essv5143835,essv5126324,essv5077277,essv5150480,essv5120584,essv5140598,essv5144984,essv5008174,essv5054863,essv5054100,essv5131602,essv5135816,essv5007047,essv5055598,essv5090813,essv5017650,essv5008044,essv5105063,essv5135717,essv5153916,essv5110014,essv5125288,essv5067783,essv5142855,essv5136924,essv5141862,essv5040298,essv5020706,essv5038178,essv5085497,essv5131518,essv5053639,essv5014881,essv5084396,essv5151191,essv5138406,essv5105211,essv5030506,essv5073006,essv5066036,essv5064050,essv5122490,essv5061912,essv5078086,essv5074103,essv5089158,essv5054563,essv5136909,essv5082506,essv5011700,essv5143179,essv5050291,essv5055048,essv5004024,essv5129537,essv5079095,essv5051444,essv5112487,essv5019178,essv5089051,essv5029064,essv5120467,essv5115489,essv5106286,essv5097799,essv5007192,essv5150437,essv5047077,essv5042893,essv5125528,essv5160594,essv5100160,essv5042581,essv5095151,essv5129432,essv5118595,essv5159685,essv5051131,essv5033535,essv5061309,essv5108713,essv5142302,essv5102784,essv5147556,essv5013233,essv5039025,essv5007621,essv5080564,essv5123413,essv5097730,essv5081762,essv5027866,essv5011699,essv5139574,essv5044911,essv5141497,essv5003975,essv5136601,essv5115502,essv5121462,essv5017851,essv5119427,essv5082604,essv5026222,essv5062570,essv5007717,essv5014617,essv5105364,essv5022413,essv5047762,essv5148516,essv5083927,essv5123173,essv5081333,essv5076479,essv5044414,essv5055444,essv5092547,essv5066931,essv5084881,essv5074177,essv5045002,essv5154488,essv5016267,essv5020313,essv5003980,essv5111360,essv5037127,essv5112962,essv5048062,essv5074953,essv5117678,essv5138111,essv5007229,essv5014095,essv5036718,essv5134242,essv5083207,essv5118744,essv5057373,essv5052476,essv5151476,essv5088864,essv5049831,essv5089625,essv5046856,essv5153580,essv5054724,essv5074442,essv5102083,essv5044976,essv5103600,essv5115893,essv5073626,essv5127651,essv5116246,essv5108828,essv5048696,essv5136769,essv5083214,essv5045483,essv5025706,essv5088085,essv5073688,essv5091849,essv5010145,essv5153775,essv5023381,essv5086306,essv5046408,essv5032730,essv5002288,essv5119380,essv5050845,essv5094823,essv5083909,essv5091815,essv5090950,essv5078939,essv5044847,essv5095066,essv5117046,essv5066877,essv5034093,essv5013758,essv5132790,essv5095567,essv5083749,essv5046717,essv5146810,essv5147096,essv5065670,essv5004713,essv5084753,essv5098907,essv5071696,essv5129679,essv5131991,essv5014265,essv5043571,essv5098260,essv5132966,essv5150423,essv5013101,essv5113617,essv5114778,essv5139251,essv5095373,essv5006414,essv5062605,essv5123503,essv5032453,essv5064219,essv5147439,essv5080687,essv5097796,essv5076819,essv5054677,essv5095304,essv5018465,essv5044473,essv5150768,essv5083684,essv5149468,essv5062711,essv5115562,essv5025992,essv5129905,essv5127194,essv5095174,essv5080547,essv5054986,essv5011816,essv5157014,essv5067658,essv5085093,essv5096061,essv5128042,essv5140072,essv5015013,essv5029730,essv5085614,essv5034975,essv5115801,essv5084566,essv5145272,essv5154441,essv5081623,essv5052457,essv5102353,essv5147709,essv5080959,essv5140936,essv5064605,essv5046033,essv5108609,essv5014895,essv5016600,essv5155058,essv5104817,essv5126395,essv5158727,essv5080609,essv5013398,essv5105737,essv5029828,essv5067388,essv5047757,essv5094457,essv5041211,essv5136084,essv5022886,essv5044481,essv5085324,essv5085015,essv5044885,essv5013818,essv5002832,essv5129383,essv5005504,essv5009260,essv5044125,essv5019587,essv5110207,essv5055337,essv5148513,essv5111606,essv5082600,essv5127463,essv5073378,essv5129046,essv5062176,essv5055959,essv5076656,essv5057434,essv5034519,essv5128426,essv5005700,essv5138831,essv5077778,essv5160777,essv5055304,essv5091632,essv5060846,essv5084698,essv5099197,essv5092697,essv5049500,essv5042574,essv5110746,essv5065153,essv5147098,essv5014953,essv5145859,essv5123862,essv5134991,essv5015333,essv5032269,essv5093451,essv5029453,essv5013225,essv5109754,essv5077616,essv5060506,essv5127568,essv5062764,essv5099413,essv5085470,essv5103339,essv5058454,essv5062920,essv5134656,essv5137291,essv5024122,essv5056970,essv5030399,essv5107873,essv5160707,essv5097171,essv5092432,essv5078075,essv5156723,essv5022384,essv5092176,essv5054911,essv5065229,essv5049595,essv5006280,essv5084242,essv5070511,essv5063091,essv5003877,essv5076882,essv5093093,essv5104933,essv5056255,essv5049520,essv5003916,essv5053459,essv5107012,essv5025637,essv5100159,essv5099871,essv5106108,essv5032876,essv5004593,essv5096594,essv5107875,essv5159920,essv5020208,essv5018011,essv5082018,essv5032169,essv5151872,essv5054078,essv5059366,essv5130207,essv5023012,essv5034542,essv5026277,essv5004811,essv5143170,essv5104098,essv5158472,essv5002430,essv5010874,essv5099875,essv5143865,essv5007548,essv5154074,essv5135093,essv5050915,essv5140744,essv5033940,essv5007426,essv5157172,essv5012525,essv5140500,essv5052482,essv5008238,essv5075761,essv5085955,essv5047745,essv5030421,essv5142306,essv5122879,essv5059803,essv5059618,essv5118331,essv5156590,essv5151182,essv5152625,essv5073542,essv5050372,essv5078726,essv5058780,essv5009868,essv5094710,essv5070093,essv5005338,essv5073571,essv5111050,essv5064683,essv5149223,essv5092967,essv5038089,essv5066327,essv5052504,essv5142559,essv5019747,essv5121221,essv5004443,essv5143624,essv5037268,essv5038802,essv5013559,essv5108934,essv5025412,essv5130490,essv5129466,essv5133077,essv5034302,essv5126180,essv5160905,essv5079044,essv5093597,essv5022295,essv5148488,essv5070581,essv5111235,essv5080140,essv5061742,essv5003676,essv5020636,essv5063364,essv5066418,essv5153752,essv5069598,essv5065831,essv5087220,essv5030129,essv5014522,essv5118579,essv5020952,essv5113528,essv5010365,essv5161044,essv5148216,essv5017131,essv5028246,essv5047446,essv5048880,essv5158142,essv5128294,essv5022930,essv5054402,essv5031783,essv5127572,essv5096418,essv5083689,essv5107701,essv5059426,essv5024144,essv5008135,essv5081658,essv5116674,essv5093542,essv5086910,essv5004769,essv5070010,essv5037822,essv5085048,essv5142954,essv5089855,essv5135107,essv5050561,essv5160900,essv5019884,essv5148523,essv5030606,essv5091787,essv5057321,essv5125473,essv5112550,essv5006831,essv5085098,essv5141389,essv5098996,essv5100333,essv5010660,essv5117542,essv5158536,essv5144554,essv5084692,essv5073169,essv5010348,essv5107442,essv5082826,essv5100858,essv5153868,essv5061214,essv5034213,essv5142422,essv5144947,essv5053454,essv5097435,essv5116054,essv5141774,essv5075026,essv5069164,essv5030300,essv5077763,essv5070229,essv5135811,essv5160411,essv5096550,essv5132822,essv5078409,essv5046986,essv5129330,essv5147782,essv5019088,essv5156089,essv5039252,essv5144746,essv5149592,essv5110936,essv5065577,essv5036677,essv5036303,essv5004948,essv5125917,essv5130618,essv5099832,essv5114519,essv5148965,essv5120717,essv5021113,essv5073646,essv5019506,essv5029313,essv5153094,essv5083928,essv5078249,essv5141328,essv5128090,essv5042227,essv5115521,essv5082500,essv5159620,essv5060727,essv5119979,essv5116478,essv5151934,essv5134612,essv5033973,essv5090924,essv5077322,essv5096862,essv5141701,essv5026512,essv5013434,essv5104193,essv5149885,essv5051926,essv5118258,essv5154803,essv5152971,essv5043280,essv5144604,essv5159096,essv5094858,essv5076826,essv5027273,essv5070328,essv5101252,essv5057792,essv5089231,essv5160448,essv5027054,essv5033583,essv5035721,essv5079812,essv5103854,essv5134248,essv5032950,essv5117689,essv5022924,essv5020073,essv5074767,essv5078969,essv5009082,essv5095222,essv5072399,essv5098536,essv5155865,essv5076172,essv5150663,essv5025242,essv5086816,essv5110580,essv5014602,essv5080224,essv5062422,essv5009608,essv5091717,essv5127326,essv5045702,essv5013387,essv5057228,essv5145110,essv5015977,essv5079828,essv5046096,essv5140982,essv5045231,essv5076591,essv5136612,essv5016201,essv5062025,essv5090175,essv5104175,essv5041776,essv5058919,essv5064702,essv5083034,essv5072019,essv5013079,essv5066791,essv5135701,essv5138634,essv5137161,essv5086704,essv5134036,essv5122814,essv5007924,essv5014357,essv5041952,essv5138094,essv5141521,essv5118178,essv5109256,essv5100357,essv5010092,essv5086449,essv5132479,essv5069233,essv5124724,essv5101560,essv5050716,essv5114980,essv5150909,essv5065541,essv5114415,essv5130066,essv5133993,essv5160985,essv5139244,essv5122812,essv5064521,essv5107409,essv5037204,essv5060921,essv5122048,essv5108412,essv5115775,essv5020390,essv5036121,essv5012633,essv5009183,essv5132989,essv5077768,essv5036598,essv5065218,essv5118402,essv5083741,essv5122945,essv5016863,essv5085174,essv5017638,essv5127583,essv5025772,essv5050299,essv5019247,essv5118326,essv5022975,essv5028245,essv5147995,essv5057447,essv5058364,essv5117856,essv5141675,essv5088321,essv5123497,essv5120434,essv5074390,essv5105531,essv5159319,essv5152874,essv5055632 M 1184 0 723 FMN2 NA06984,NA06986,NA06995,NA06997,NA07022,NA07037,NA07045,NA07055,NA07345,NA07346,NA07347,NA07349,NA07435,NA10830,NA10831,NA10835,NA10836,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10852,NA10853,NA10854,NA10855,NA10864,NA11832,NA11839,NA11882,NA11893,NA11894,NA11920,NA11930,NA11931,NA11995,NA12003,NA12005,NA12043,NA12045,NA12056,NA12057,NA12144,NA12145,NA12155,NA12239,NA12248,NA12249,NA12264,NA12273,NA12275,NA12282,NA12287,NA12335,NA12336,NA12340,NA12341,NA12343,NA12348,NA12386,NA12399,NA12400,NA12707,NA12708,NA12716,NA12739,NA12740,NA12748,NA12750,NA12752,NA12760,NA12762,NA12777,NA12801,NA12812,NA12813,NA12815,NA12817,NA12818,NA12828,NA12830,NA12842,NA12872,NA12873,NA12890,NA12892,NA17962,NA17966,NA17967,NA17968,NA17969,NA17970,NA17972,NA17975,NA17977,NA17980,NA17981,NA17982,NA17988,NA17989,NA17996,NA17997,NA17999,NA18102,NA18106,NA18108,NA18117,NA18120,NA18125,NA18127,NA18128,NA18129,NA18132,NA18133,NA18135,NA18136,NA18141,NA18146,NA18148,NA18149,NA18154,NA18158,NA18159,NA18161,NA18484,NA18485,NA18486,NA18487,NA18489,NA18497,NA18498,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18515,NA18516,NA18517,NA18518,NA18519,NA18524,NA18526,NA18529,NA18532,NA18534,NA18537,NA18542,NA18544,NA18545,NA18546,NA18552,NA18561,NA18562,NA18563,NA18571,NA18572,NA18576,NA18577,NA18582,NA18594,NA18595,NA18597,NA18599,NA18603,NA18605,NA18608,NA18610,NA18611,NA18612,NA18613,NA18615,NA18616,NA18620,NA18621,NA18623,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18637,NA18638,NA18639,NA18640,NA18641,NA18642,NA18645,NA18647,NA18674,NA18682,NA18685,NA18689,NA18694,NA18702,NA18704,NA18740,NA18747,NA18748,NA18749,NA18757,NA18852,NA18853,NA18854,NA18855,NA18857,NA18858,NA18859,NA18861,NA18862,NA18863,NA18867,NA18869,NA18870,NA18871,NA18872,NA18874,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18939,NA18940,NA18942,NA18944,NA18945,NA18948,NA18952,NA18953,NA18954,NA18960,NA18961,NA18962,NA18964,NA18967,NA18969,NA18970,NA18971,NA18972,NA18980,NA18981,NA18987,NA18990,NA18991,NA18994,NA18998,NA18999,NA19000,NA19001,NA19002,NA19007,NA19027,NA19031,NA19035,NA19036,NA19038,NA19041,NA19044,NA19055,NA19056,NA19060,NA19062,NA19063,NA19065,NA19066,NA19067,NA19070,NA19075,NA19076,NA19078,NA19080,NA19081,NA19083,NA19086,NA19093,NA19094,NA19095,NA19096,NA19097,NA19099,NA19101,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19116,NA19117,NA19118,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19144,NA19146,NA19147,NA19149,NA19150,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19176,NA19178,NA19179,NA19180,NA19183,NA19184,NA19185,NA19186,NA19189,NA19191,NA19192,NA19193,NA19194,NA19198,NA19199,NA19200,NA19201,NA19202,NA19203,NA19204,NA19206,NA19207,NA19208,NA19210,NA19211,NA19213,NA19214,NA19215,NA19221,NA19222,NA19224,NA19225,NA19226,NA19235,NA19238,NA19239,NA19240,NA19257,NA19258,NA19307,NA19308,NA19309,NA19310,NA19311,NA19313,NA19314,NA19315,NA19316,NA19318,NA19319,NA19324,NA19327,NA19328,NA19334,NA19347,NA19359,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19385,NA19390,NA19393,NA19394,NA19397,NA19398,NA19399,NA19403,NA19404,NA19429,NA19430,NA19434,NA19435,NA19437,NA19438,NA19443,NA19444,NA19445,NA19448,NA19449,NA19456,NA19457,NA19462,NA19463,NA19467,NA19469,NA19470,NA19471,NA19472,NA19473,NA19474,NA19625,NA19651,NA19653,NA19657,NA19660,NA19665,NA19671,NA19675,NA19679,NA19683,NA19686,NA19700,NA19711,NA19712,NA19716,NA19718,NA19719,NA19720,NA19722,NA19723,NA19724,NA19725,NA19727,NA19747,NA19748,NA19749,NA19751,NA19756,NA19757,NA19770,NA19773,NA19794,NA19818,NA19819,NA19828,NA19834,NA19835,NA19836,NA19901,NA19902,NA19908,NA19909,NA19914,NA19915,NA19916,NA19917,NA19919,NA19982,NA19983,NA19985,NA20129,NA20276,NA20277,NA20279,NA20281,NA20282,NA20284,NA20287,NA20288,NA20289,NA20295,NA20297,NA20300,NA20301,NA20302,NA20317,NA20319,NA20322,NA20332,NA20333,NA20336,NA20341,NA20343,NA20344,NA20345,NA20346,NA20347,NA20348,NA20349,NA20350,NA20356,NA20359,NA20363,NA20364,NA20502,NA20510,NA20515,NA20522,NA20525,NA20529,NA20535,NA20539,NA20582,NA20756,NA20757,NA20758,NA20759,NA20768,NA20769,NA20770,NA20771,NA20783,NA20792,NA20803,NA20805,NA20806,NA20809,NA20810,NA20818,NA20826,NA20828,NA20846,NA20849,NA20850,NA20854,NA20858,NA20861,NA20866,NA20869,NA20871,NA20873,NA20875,NA20876,NA20877,NA20879,NA20881,NA20883,NA20884,NA20888,NA20891,NA20895,NA20896,NA20898,NA20899,NA20901,NA20902,NA20907,NA20911,NA21088,NA21090,NA21097,NA21099,NA21105,NA21106,NA21109,NA21111,NA21115,NA21116,NA21117,NA21118,NA21123,NA21137,NA21141,NA21295,NA21297,NA21300,NA21301,NA21302,NA21308,NA21309,NA21311,NA21312,NA21313,NA21314,NA21316,NA21317,NA21318,NA21333,NA21339,NA21344,NA21352,NA21353,NA21355,NA21356,NA21359,NA21360,NA21361,NA21362,NA21363,NA21367,NA21370,NA21371,NA21378,NA21379,NA21381,NA21384,NA21385,NA21386,NA21387,NA21388,NA21390,NA21391,NA21399,NA21400,NA21401,NA21402,NA21404,NA21405,NA21408,NA21414,NA21417,NA21418,NA21420,NA21421,NA21423,NA21424,NA21425,NA21434,NA21435,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21448,NA21451,NA21453,NA21454,NA21455,NA21457,NA21473,NA21475,NA21477,NA21479,NA21480,NA21485,NA21487,NA21488,NA21489,NA21490,NA21491,NA21493,NA21494,NA21512,NA21513,NA21514,NA21519,NA21520,NA21522,NA21523,NA21524,NA21525,NA21526,NA21527,NA21528,NA21573,NA21574,NA21576,NA21577,NA21578,NA21582,NA21596,NA21597,NA21599,NA21600,NA21608,NA21613,NA21614,NA21616,NA21617,NA21619,NA21620,NA21632,NA21634,NA21635,NA21636,NA21647,NA21648,NA21650,NA21678,NA21682,NA21683,NA21685,NA21686,NA21689,NA21693,NA21717,NA21718,NA21719,NA21722,NA21723,NA21739,NA21768,NA21776,NA21784,NA21825,NA21826 esv2421638 1 238460638 238461502 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5048290,essv5147543,essv5092275,essv5052201,essv5157386,essv5036388,essv5019287,essv5007960,essv5104152,essv5004149,essv5107806,essv5090482,essv5067903,essv5155063,essv5161165,essv5009676,essv5129984,essv5015041,essv5122602,essv5034072,essv5096685,essv5072843,essv5046462,essv5085898,essv5121333,essv5044727,essv5073236,essv5145169,essv5103458,essv5075345,essv5009592,essv5110758,essv5075146,essv5041439,essv5011502,essv5092382,essv5121880,essv5022202,essv5103993,essv5058931,essv5147710,essv5084582,essv5149257,essv5140206,essv5055973,essv5129139,essv5129590,essv5040553,essv5087183,essv5118491,essv5010406,essv5042089,essv5160813,essv5003832,essv5086319,essv5078798,essv5022214,essv5088641,essv5120464,essv5091900,essv5014498,essv5144631,essv5043153,essv5062457,essv5116912,essv5015744,essv5111190,essv5128140,essv5051380,essv5144299,essv5050024,essv5150114,essv5013765,essv5047428,essv5093797,essv5102073,essv5024865,essv5109200,essv5047586,essv5020948,essv5018211,essv5093564,essv5058803,essv5132178,essv5159461,essv5039710,essv5118680,essv5013242,essv5135905,essv5027402,essv5088777,essv5131205,essv5156566,essv5069771,essv5012635,essv5144603,essv5057909,essv5009129,essv5127066,essv5135444,essv5158898,essv5125407,essv5158441,essv5063476,essv5087588,essv5076775,essv5013012,essv5119220,essv5018325,essv5125875,essv5046091,essv5031739,essv5068121,essv5106429,essv5061788,essv5058052,essv5066727,essv5133746,essv5032402,essv5053179,essv5077054,essv5022976,essv5129037,essv5043138,essv5148934,essv5010164,essv5142366,essv5062357,essv5140485,essv5056479,essv5142731,essv5156036,essv5089735,essv5050524,essv5107908,essv5157904,essv5027174,essv5023793,essv5019513,essv5083819,essv5066856,essv5045598,essv5097464,essv5020473,essv5035337,essv5061290,essv5057249,essv5079237,essv5050356,essv5039803,essv5065774,essv5141083,essv5133509,essv5108752,essv5045187,essv5061425,essv5085199,essv5087278,essv5003440,essv5129357,essv5044346,essv5141750,essv5112492,essv5159332,essv5045180,essv5141161,essv5159967,essv5117638,essv5104444,essv5032117,essv5057366,essv5031166,essv5037241,essv5073155,essv5060160,essv5012918,essv5144805,essv5013516,essv5069974,essv5045130,essv5046571,essv5159741,essv5092391,essv5103427,essv5053494,essv5028856,essv5147544,essv5121447,essv5068578,essv5148800,essv5114787,essv5059465,essv5053939,essv5153091,essv5099046,essv5071796,essv5092507,essv5064460,essv5078961,essv5081065,essv5082275,essv5104789,essv5108151,essv5013589,essv5080531,essv5013157,essv5126196,essv5017005,essv5115612,essv5071086,essv5078801,essv5072042,essv5024558,essv5072971,essv5156198,essv5090101,essv5050661,essv5102345,essv5158524,essv5133896,essv5048710,essv5076827,essv5154052,essv5085339,essv5021073,essv5050800,essv5108771,essv5148576,essv5018500,essv5125319,essv5012686,essv5133210,essv5004159,essv5118509,essv5019595,essv5053489,essv5037648,essv5097626,essv5119497,essv5013243,essv5139883,essv5033500,essv5048353,essv5087634,essv5030373,essv5075439,essv5093013,essv5150716,essv5081991,essv5016539,essv5095698,essv5133687,essv5020539,essv5004532,essv5046063,essv5029338,essv5062022,essv5043203,essv5082467,essv5057442,essv5146646,essv5065502,essv5072347,essv5077527,essv5054982,essv5133884,essv5033937,essv5149188,essv5022486,essv5134519,essv5062369,essv5101696,essv5147547,essv5071519,essv5141296,essv5014122,essv5061014,essv5130222,essv5036269,essv5152896,essv5051427,essv5115699,essv5070320,essv5092263,essv5087396,essv5061548,essv5023345,essv5073398,essv5053629,essv5073608,essv5121093,essv5064608,essv5093904,essv5054577,essv5112786,essv5006526,essv5044190,essv5156957,essv5140028,essv5074200,essv5077699,essv5066644,essv5018743,essv5104322,essv5072230,essv5066291,essv5050641,essv5125157,essv5119593,essv5107188,essv5038208,essv5110008,essv5007248,essv5121128,essv5051508,essv5150117,essv5063831,essv5034256,essv5020025,essv5052429,essv5071731,essv5076053,essv5009498,essv5146177,essv5100890,essv5058373,essv5070843,essv5008420,essv5098892,essv5003699,essv5076976,essv5082428,essv5139891,essv5091214,essv5118537,essv5033528,essv5096000,essv5161225,essv5062486,essv5124798,essv5008303,essv5106651,essv5037251,essv5002570,essv5103732,essv5045322,essv5033475,essv5041797,essv5028612,essv5049453,essv5074369,essv5043268,essv5009046,essv5073814,essv5121765,essv5090843,essv5119598,essv5079228,essv5036161,essv5042095,essv5002632,essv5101291,essv5016184,essv5088930,essv5043136,essv5007361,essv5110015,essv5044214,essv5151461,essv5029245,essv5066316,essv5012179,essv5132109,essv5125040,essv5143239,essv5133801,essv5127331,essv5042981,essv5140992,essv5142327,essv5096651,essv5125259,essv5042582,essv5072115,essv5124187,essv5062088,essv5069293,essv5106111,essv5030483,essv5117160,essv5046303,essv5136834,essv5158773,essv5012728,essv5082957,essv5031715,essv5117863,essv5151818,essv5108092,essv5029524,essv5128566,essv5097917,essv5120196,essv5136790,essv5144993,essv5079481,essv5133052,essv5085924,essv5095890,essv5011179,essv5159672,essv5059671,essv5100817,essv5048665,essv5058631,essv5069709,essv5051797,essv5055184,essv5136056,essv5024568,essv5088702,essv5022076,essv5012083,essv5136223,essv5139632,essv5125143,essv5100994,essv5090558,essv5147816,essv5073017,essv5134463,essv5002348,essv5137239,essv5033365,essv5022308,essv5136695,essv5144078,essv5055062,essv5113262,essv5115245,essv5053936,essv5130465,essv5022334,essv5084372,essv5121996,essv5047424,essv5058989,essv5099000,essv5013020,essv5112302,essv5081512,essv5155265,essv5010458,essv5159909,essv5145478,essv5038623,essv5037066,essv5156025,essv5097040,essv5128652,essv5137769,essv5074795,essv5088077,essv5118462,essv5097531,essv5079157,essv5065741,essv5065112,essv5042021,essv5025568,essv5014574,essv5057422,essv5076161,essv5043452,essv5119446,essv5032784,essv5120446,essv5029469,essv5097449,essv5121519,essv5150102,essv5111035,essv5056938,essv5065624,essv5031245,essv5105587,essv5130179,essv5114802,essv5028216,essv5012775,essv5017917,essv5104785,essv5036824,essv5141277,essv5101012,essv5101313,essv5015868,essv5052221,essv5084641,essv5154271,essv5160948,essv5048377,essv5135088,essv5105178,essv5015495,essv5006848,essv5126584,essv5010197,essv5120316,essv5075737,essv5085501,essv5027259,essv5043285,essv5056153,essv5125554,essv5154017,essv5046443,essv5049661,essv5010990,essv5107351,essv5070811,essv5063475,essv5153510,essv5020516,essv5102898,essv5108452,essv5133216,essv5034790,essv5087596,essv5085677,essv5147962,essv5075250,essv5005117,essv5050879,essv5109196,essv5042144,essv5149695,essv5085450,essv5080871,essv5133607,essv5080459,essv5082248,essv5056041,essv5031312,essv5020165,essv5065895,essv5012422,essv5108331,essv5051378,essv5101416,essv5063980,essv5029607,essv5037026,essv5004729,essv5109711,essv5040186,essv5092595,essv5122287,essv5123216,essv5141986,essv5009062,essv5043566,essv5069000,essv5043131,essv5155386,essv5147172,essv5080557,essv5101465,essv5134082,essv5119817,essv5046890,essv5036382,essv5098659,essv5049447,essv5015011,essv5055894,essv5027805,essv5087398,essv5019160,essv5024869,essv5041147,essv5113012,essv5111931,essv5112261,essv5043190,essv5124859,essv5155626,essv5011907,essv5150366,essv5014442,essv5008508,essv5040251,essv5075007,essv5054950,essv5086567,essv5027153,essv5026327,essv5093191,essv5142150,essv5045220,essv5095499,essv5137167,essv5146311,essv5035259,essv5037927,essv5140672,essv5025363,essv5033858,essv5008199,essv5090991,essv5130061,essv5060423,essv5155783,essv5096633,essv5138822,essv5148960,essv5094176,essv5017328,essv5046684,essv5150129,essv5031727,essv5105907,essv5021203,essv5076358,essv5104230,essv5054412,essv5091604,essv5086808,essv5036148,essv5030581,essv5053462,essv5042519,essv5104006,essv5139427,essv5153468,essv5070666,essv5077315,essv5097580,essv5022806,essv5060152,essv5133403,essv5133389,essv5079608,essv5104249,essv5107269,essv5026967,essv5120380,essv5029973,essv5115413,essv5149466,essv5071959,essv5013988,essv5020067,essv5018309,essv5035578,essv5111614,essv5002154,essv5136192,essv5158039,essv5095941,essv5005141,essv5133147,essv5020307,essv5022959,essv5068140,essv5028705,essv5068029,essv5021127,essv5107377,essv5095076,essv5044798,essv5068947,essv5021719,essv5129684,essv5132957,essv5125330,essv5123447,essv5005514,essv5100286,essv5108227,essv5132345,essv5081638,essv5137268,essv5092543,essv5071037,essv5135796,essv5069002,essv5106840,essv5020120,essv5099810 M 1184 0 690 FMN2 NA06986,NA06995,NA06997,NA07022,NA07037,NA07045,NA07345,NA07346,NA07347,NA07349,NA07435,NA10830,NA10831,NA10835,NA10838,NA10839,NA10840,NA10845,NA10846,NA10847,NA10850,NA10852,NA10853,NA10854,NA10855,NA10864,NA11832,NA11839,NA11882,NA11893,NA11894,NA11920,NA11931,NA11995,NA12003,NA12005,NA12043,NA12045,NA12056,NA12057,NA12144,NA12155,NA12239,NA12248,NA12249,NA12264,NA12282,NA12287,NA12335,NA12336,NA12340,NA12341,NA12343,NA12348,NA12386,NA12399,NA12400,NA12707,NA12708,NA12716,NA12739,NA12740,NA12748,NA12750,NA12752,NA12760,NA12762,NA12777,NA12801,NA12812,NA12813,NA12815,NA12817,NA12818,NA12828,NA12830,NA12843,NA12872,NA12873,NA12890,NA12892,NA17966,NA17967,NA17968,NA17969,NA17975,NA17980,NA17981,NA17982,NA17988,NA17989,NA17996,NA17997,NA18102,NA18106,NA18108,NA18117,NA18120,NA18125,NA18127,NA18128,NA18129,NA18132,NA18133,NA18135,NA18136,NA18141,NA18146,NA18148,NA18149,NA18154,NA18158,NA18159,NA18484,NA18485,NA18486,NA18487,NA18489,NA18498,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18515,NA18516,NA18517,NA18518,NA18519,NA18526,NA18529,NA18532,NA18534,NA18537,NA18542,NA18544,NA18545,NA18546,NA18552,NA18561,NA18562,NA18563,NA18571,NA18572,NA18576,NA18577,NA18582,NA18594,NA18595,NA18597,NA18599,NA18603,NA18605,NA18610,NA18611,NA18612,NA18613,NA18615,NA18616,NA18620,NA18621,NA18623,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18637,NA18638,NA18639,NA18640,NA18641,NA18642,NA18645,NA18647,NA18674,NA18682,NA18685,NA18689,NA18694,NA18702,NA18704,NA18747,NA18748,NA18749,NA18757,NA18852,NA18853,NA18854,NA18855,NA18857,NA18858,NA18859,NA18861,NA18862,NA18863,NA18867,NA18869,NA18870,NA18871,NA18872,NA18874,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18939,NA18940,NA18942,NA18944,NA18948,NA18952,NA18953,NA18954,NA18960,NA18961,NA18962,NA18964,NA18967,NA18969,NA18970,NA18971,NA18972,NA18980,NA18981,NA18987,NA18990,NA18991,NA18994,NA18998,NA18999,NA19000,NA19001,NA19002,NA19007,NA19027,NA19031,NA19035,NA19036,NA19038,NA19041,NA19044,NA19055,NA19060,NA19062,NA19063,NA19065,NA19066,NA19067,NA19070,NA19075,NA19076,NA19078,NA19080,NA19081,NA19083,NA19086,NA19093,NA19094,NA19095,NA19096,NA19097,NA19099,NA19101,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19120,NA19121,NA19123,NA19127,NA19128,NA19129,NA19130,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19144,NA19146,NA19147,NA19149,NA19150,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19176,NA19178,NA19180,NA19183,NA19184,NA19185,NA19186,NA19189,NA19191,NA19192,NA19193,NA19194,NA19198,NA19199,NA19200,NA19201,NA19202,NA19203,NA19204,NA19206,NA19207,NA19208,NA19210,NA19211,NA19213,NA19214,NA19215,NA19221,NA19222,NA19224,NA19225,NA19226,NA19235,NA19238,NA19239,NA19240,NA19257,NA19307,NA19308,NA19309,NA19310,NA19311,NA19313,NA19314,NA19315,NA19316,NA19318,NA19319,NA19324,NA19327,NA19328,NA19334,NA19347,NA19359,NA19371,NA19372,NA19373,NA19374,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19385,NA19390,NA19393,NA19394,NA19397,NA19399,NA19403,NA19404,NA19430,NA19434,NA19435,NA19437,NA19438,NA19443,NA19444,NA19445,NA19448,NA19449,NA19456,NA19457,NA19462,NA19463,NA19466,NA19467,NA19470,NA19471,NA19472,NA19473,NA19474,NA19625,NA19651,NA19653,NA19660,NA19670,NA19679,NA19686,NA19700,NA19712,NA19713,NA19716,NA19718,NA19719,NA19720,NA19722,NA19723,NA19724,NA19725,NA19727,NA19747,NA19748,NA19749,NA19751,NA19756,NA19757,NA19770,NA19773,NA19775,NA19794,NA19795,NA19818,NA19819,NA19828,NA19834,NA19835,NA19836,NA19901,NA19902,NA19908,NA19909,NA19914,NA19915,NA19916,NA19917,NA19919,NA19982,NA19983,NA19985,NA20129,NA20276,NA20277,NA20279,NA20281,NA20282,NA20284,NA20287,NA20288,NA20289,NA20295,NA20297,NA20300,NA20301,NA20302,NA20317,NA20319,NA20322,NA20332,NA20333,NA20336,NA20341,NA20343,NA20344,NA20345,NA20346,NA20347,NA20348,NA20349,NA20350,NA20356,NA20363,NA20364,NA20502,NA20510,NA20515,NA20522,NA20525,NA20529,NA20535,NA20539,NA20582,NA20756,NA20757,NA20758,NA20759,NA20768,NA20769,NA20770,NA20771,NA20783,NA20790,NA20792,NA20799,NA20803,NA20805,NA20806,NA20809,NA20810,NA20818,NA20826,NA20846,NA20849,NA20850,NA20854,NA20858,NA20861,NA20866,NA20869,NA20871,NA20873,NA20875,NA20876,NA20877,NA20879,NA20881,NA20883,NA20884,NA20888,NA20891,NA20895,NA20896,NA20898,NA20899,NA20901,NA20902,NA20907,NA20911,NA21088,NA21090,NA21097,NA21105,NA21106,NA21109,NA21111,NA21115,NA21116,NA21117,NA21118,NA21123,NA21137,NA21141,NA21295,NA21297,NA21300,NA21301,NA21302,NA21308,NA21311,NA21312,NA21313,NA21314,NA21316,NA21317,NA21318,NA21333,NA21339,NA21344,NA21352,NA21353,NA21355,NA21356,NA21359,NA21360,NA21361,NA21362,NA21363,NA21367,NA21370,NA21371,NA21378,NA21379,NA21381,NA21384,NA21385,NA21386,NA21387,NA21388,NA21390,NA21391,NA21399,NA21400,NA21401,NA21402,NA21404,NA21405,NA21408,NA21414,NA21417,NA21418,NA21420,NA21421,NA21423,NA21424,NA21425,NA21434,NA21435,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21448,NA21451,NA21453,NA21454,NA21455,NA21457,NA21473,NA21475,NA21477,NA21479,NA21480,NA21485,NA21487,NA21488,NA21490,NA21491,NA21493,NA21494,NA21512,NA21513,NA21514,NA21519,NA21520,NA21522,NA21523,NA21524,NA21525,NA21526,NA21528,NA21573,NA21574,NA21576,NA21577,NA21578,NA21582,NA21596,NA21597,NA21599,NA21600,NA21608,NA21613,NA21614,NA21616,NA21617,NA21619,NA21620,NA21632,NA21634,NA21635,NA21636,NA21647,NA21648,NA21650,NA21678,NA21682,NA21683,NA21685,NA21686,NA21689,NA21693,NA21717,NA21718,NA21722,NA21723,NA21739,NA21768,NA21776,NA21784,NA21825,NA21826 nsv549453 1 238460668 238461157 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739124,nssv739123,nssv739122,nssv739125 M 17421 0 4 FMN2 dgv874n54 1 238460668 238461337 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549455,nsv549454 M 17421 0 12 FMN2 nsv833048 1 238523319 238687732 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441745 M 95 1 0 FMN2 esv2075596 1 238594967 238595370 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4834023 M 1 0 1 FMN2 NA18507 nsv159151 1 238595070 238595153 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177729 M 24 FMN2 esv2600451 1 238683099 238684830 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5183179 M 1 0 1 FMN2 NA18507 esv8951 1 238683385 238684203 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31392 M 1 0 0 FMN2 esv2145928 1 238683428 238684124 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4831431 M 1 0 1 FMN2 NA18507 nsv527343 1 238688355 238690072 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703769 M 2026 0 1 FMN2 nsv506987 1 238706873 238712873 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619266 M 4 0 0 "" NA10860 esv2617307 1 238707266 238708833 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282886 M 1 0 1 "" NA18507 esv2018063 1 238707752 238708389 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4618654 M 1 0 1 "" NA18507 esv1227686 1 238707835 238708237 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3706267 M 2 0 1 "" HuRef esv993179 1 238708742 238709285 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564753 M 3 0 1 "" HuRef esv3447917 1 238742428 238742428 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825158 M 185 1 0 GREM2 NA19240 esv2178515 1 238766373 238766803 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4536985 M 1 0 1 GREM2 NA18507 esv1001491 1 238766489 238766489 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3582947 M 3 1 0 GREM2 HuRef esv2304550 1 238775208 238775615 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4913129 M 1 0 1 GREM2 NA18507 nsv523917 1 238778543 238811407 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699760 M 2026 0 1 GREM2 esv1005597 1 238804789 238805743 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579016 M 3 0 1 GREM2 HuRef esv3446041 1 238882149 238882149 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701367 M 185 1 0 "" NA12878 nsv470786 1 238912747 239023472 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544425 M 443 1 0 RGS7 HGDP00950 nsv468650 1 238912747 239034050 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543741 M 1557 1 0 RGS7 HGDP00950 nsv549456 1 238912747 239034050 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174075 M 17421 1 0 RGS7 HGDP00950 nsv549457 1 238912747 239162199 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739138 M 17421 1 0 RGS7 nsv945397 1 238990307 238992175 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824681,nssv1824674,nssv1824654,nssv1824667,nssv1824650,nssv1825492,nssv1824677,nssv1825501,nssv1825518,nssv1825508,nssv1824638,nssv1825504,nssv1825521,nssv1824673,nssv1825526,nssv1825513,nssv1824685,nssv1824670,nssv1825529,nssv1825520,nssv1824649,nssv1825505,nssv1825527,nssv1825506,nssv1824644,nssv1824669,nssv1825535,nssv1825515,nssv1824640,nssv1825496,nssv1824656,nssv1825500,nssv1824662,nssv1824671,nssv1824666,nssv1825498,nssv1824661,nssv1825503,nssv1825523,nssv1825502,nssv1825532,nssv1825494,nssv1825525,nssv1824668,nssv1825517,nssv1825507,nssv1825534,nssv1824676,nssv1824639,nssv1825499,nssv1824683,nssv1825495,nssv1824637,nssv1824675,nssv1825528,nssv1825512,nssv1824679,nssv1825511,nssv1824645,nssv1825522,nssv1825533,nssv1825493,nssv1824655,nssv1825509,nssv1824665,nssv1825519,nssv1824653,nssv1824672,nssv1824663,nssv1825497,nssv1824651,nssv1825510,nssv1825537,nssv1824658,nssv1825524,nssv1824648,nssv1824660,nssv1824647,nssv1824678,nssv1824686,nssv1824680,nssv1824682,nssv1824652,nssv1825531,nssv1824646,nssv1825516,nssv1824664,nssv1825491,nssv1825536,nssv1824642,nssv1824641,nssv1824684,nssv1824657,nssv1825514,nssv1825530,nssv1824643,nssv1824659 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945398 1 238998751 239001164 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1824701,nssv1825857,nssv1825893,nssv1825883,nssv1824693,nssv1825865,nssv1824700,nssv1825879,nssv1824709,nssv1825851,nssv1824698,nssv1825854,nssv1824697,nssv1825852,nssv1824702,nssv1825858,nssv1824699,nssv1825870,nssv1824716,nssv1824719,nssv1825887,nssv1824714,nssv1825889,nssv1825847,nssv1825886,nssv1825863,nssv1824689,nssv1824723,nssv1824715,nssv1825899,nssv1825891,nssv1825898,nssv1824711,nssv1825884,nssv1825892,nssv1825875,nssv1824692,nssv1825901,nssv1824694,nssv1825903,nssv1824718,nssv1825905,nssv1824691,nssv1825846,nssv1825890,nssv1825862,nssv1824703,nssv1825853,nssv1824690,nssv1824721,nssv1824695,nssv1825872,nssv1825895,nssv1825904,nssv1825888,nssv1825849,nssv1824707,nssv1824713,nssv1824705,nssv1824717,nssv1824696,nssv1825896,nssv1824704,nssv1825885,nssv1824688,nssv1825871,nssv1825894,nssv1825848,nssv1824708,nssv1825881,nssv1824706,nssv1825866,nssv1825877,nssv1825882,nssv1825867,nssv1825900,nssv1825880,nssv1825864,nssv1825878,nssv1825850,nssv1824687,nssv1825876,nssv1825861,nssv1825902,nssv1825873,nssv1825856,nssv1825869,nssv1824722,nssv1824712,nssv1825897,nssv1824710,nssv1825860,nssv1825859,nssv1825868,nssv1824720,nssv1825874,nssv1825855 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv516512 1 239001460 239001756 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv668770,nssv660466 M 2026 0 2 "" esv1049013 1 239008024 239008024 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3685711 M 2 1 0 RGS7 HuRef esv2630353 1 239048241 239049671 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5336609 M 1 0 1 RGS7 NA18507 nsv468661 1 239093681 239236773 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543752 M 1557 1 0 RGS7 HGDP00950 nsv549458 1 239093681 239236773 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174076 M 17421 1 0 RGS7 HGDP00950 nsv945399 1 239144195 239153673 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1825927,nssv1826002,nssv1825990,nssv1825942,nssv1825983,nssv1825959,nssv1825917,nssv1825932,nssv1825930,nssv1825976,nssv1825934,nssv1826000,nssv1825988,nssv1825965,nssv1825912,nssv1825952,nssv1825984,nssv1825931,nssv1825928,nssv1825939,nssv1825919,nssv1825950,nssv1825986,nssv1825954,nssv1825937,nssv1825980,nssv1825911,nssv1825929,nssv1825989,nssv1825940,nssv1825920,nssv1825999,nssv1825935,nssv1825972,nssv1825913,nssv1825955,nssv1825921,nssv1825967,nssv1825991,nssv1825906,nssv1825987,nssv1825944,nssv1825918,nssv1825960,nssv1825907,nssv1825995,nssv1825915,nssv1825998,nssv1825922,nssv1826001,nssv1825910,nssv1825978,nssv1825914,nssv1825964,nssv1825908,nssv1825993,nssv1825992,nssv1825996,nssv1825909,nssv1825948,nssv1825924,nssv1825979,nssv1825926,nssv1825947,nssv1825923,nssv1825982,nssv1825985,nssv1825933,nssv1825925,nssv1825962,nssv1825916,nssv1825936,nssv1825949,nssv1825969,nssv1825974,nssv1825945,nssv1825963,nssv1825943,nssv1825973,nssv1825981,nssv1825946,nssv1825997,nssv1825953,nssv1825968,nssv1825951,nssv1825938,nssv1825966,nssv1825961,nssv1825994,nssv1825977,nssv1825958,nssv1825956,nssv1825970,nssv1825941,nssv1825975,nssv1825957,nssv1825971 M 97 10 0 RGS7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv827587 1 239200113 239200769 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440880 M 31 0 1 RGS7 NA18969 nsv470787 1 239205774 239231293 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544426 M 443 1 0 RGS7 HGDP00950 esv2543708 1 239215997 239217544 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5180025 M 1 0 1 RGS7 NA18507 esv8124 1 239216246 239217088 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30565 M 1 0 0 RGS7 esv2404546 1 239216305 239217002 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4806701 M 1 0 1 RGS7 NA18507 esv3159 1 239216415 239216921 CNV loss Wang_et_al_2008 18987735 Sequencing essv25600 M 1 0 1 RGS7 YH esv988740 1 239216486 239216810 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584956 M 3 0 1 RGS7 HuRef esv1788930 1 239216496 239216821 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4225434 M 2 0 1 RGS7 HuRef nsv524932 1 239218713 239230547 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700945 M 2026 0 1 RGS7 esv274863 1 239251767 239255870 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585817,essv2585758 M 1250 1 1 RGS7 esv2310378 1 239252769 239253246 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4559725 M 1 0 1 RGS7 NA18507 esv1003704 1 239252940 239253062 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583963 M 3 0 1 RGS7 HuRef nsv998437 1 239261286 239281884 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500606,nssv3499560,nssv3705547,nssv3490816 M 29084 0 4 RGS7 nsv549459 1 239262958 239282363 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739139,nssv739140,nssv739141 M 17421 0 3 RGS7 esv3302493 1 239289706 239289808 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731686,essv7731317,essv7730933 M 185 3 0 RGS7 NA19238,NA19239,NA19240 esv3437950 1 239289719 239289819 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670882,essv8670884,essv8670883 M 185 3 0 RGS7 NA19238,NA19239,NA19240 esv1179588 1 239298162 239298162 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4135846 M 2 1 0 RGS7 HuRef nsv517999 1 239353148 239507041 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695410 M 2026 0 1 MIR3123,RGS7 nsv1001342 1 239364523 239412056 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484565 M 29084 1 0 RGS7 nsv833059 1 239413412 239591758 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441747,nssv1441746 M 95 2 0 RGS7 esv3891270 1 239423241 239436641 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25801089,essv25797672,essv25784061,essv25780931,essv25778815,essv25787256,essv25786401,essv25785639 M 3017 0 8 RGS7 nsv511746 1 239426785 239430529 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626392 M 1 0 1 RGS7 1 esv998180 1 239426870 239427719 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564557 M 3 0 1 RGS7 HuRef esv7124 1 239426965 239427723 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29565 M 1 0 0 RGS7 esv2194065 1 239426968 239427677 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4744132 M 1 0 1 RGS7 NA18507 esv5275 1 239427079 239427540 CNV loss Wang_et_al_2008 18987735 Sequencing essv27716 M 1 0 1 RGS7 YH esv1012905 1 239427176 239427491 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3791873 M 2 0 1 RGS7 HuRef nsv1015107 1 239429392 239463901 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498420 M 29084 0 1 RGS7 esv3423558 1 239449721 239449737 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903854,essv8903855,essv8903856,essv8903853 M 185 4 0 RGS7 NA18508,NA18523,NA18861,NA19108 esv3307721 1 239449725 239449726 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7755512,essv7754973,essv7754606,essv7759291 M 185 4 0 RGS7 NA18508,NA18523,NA18861,NA19108 esv275294 1 239469788 239473046 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2585827,essv2585929 M 1250 1 1 RGS7 nsv478823 1 239495214 239495214 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015394 M 9 1 0 RGS7 NA18507 nsv827598 1 239518045 239518645 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440881 M 31 0 1 RGS7 NA18969 nsv1002214 1 239525562 240166413 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484630 M 29084 1 0 CHML,EXO1,FH,KMO,OPN3,RGS7,WDR64 esv3387257 1 239535952 239536750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692198 M 185 1 0 RGS7 NA19239 nsv160688 1 239556962 239557051 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179266 M 24 RGS7 nsv549460 1 239561201 239899910 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739142 M 17421 1 0 CHML,FH,KMO,OPN3,RGS7,WDR64 nsv523209 1 239569532 239573870 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698929 M 2026 0 1 RGS7 nsv947474 1 239581918 239584467 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765049 M 97 1 0 RGS7 HGDP00998 nsv549461 1 239621226 239706024 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739143 M 17421 0 1 "" nsv475335 1 239622150 239622150 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013764 M 9 1 0 "" NA19240 esv2764245 1 239639469 239644161 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007025,essv7007026,essv7007027,essv7007024 M 1109 0 4 "" RW_0073,RW_0140,RW_0222,RW_0544 nsv827609 1 239651819 239652807 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428080 M 31 0 1 "" AK10 esv9650 1 239652750 239653259 CNV loss Ahn_et_al_2009 19470904 Sequencing essv32091 M 1 0 0 "" esv3841 1 239652821 239653177 CNV loss Wang_et_al_2008 18987735 Sequencing essv26282 M 1 0 1 "" YH nsv524187 1 239653310 239653457 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700070 M 2026 0 1 "" esv28035 1 239661427 239663139 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10467 M 40 0 1 "" NA18517 esv3323674 1 239684007 239684007 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653210,essv8653212,essv8653211 M 185 3 0 "" NA12878,NA12891,NA12892 esv3308556 1 239686698 239686699 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7842999,essv7841533,essv7842217 M 185 3 0 "" NA12892,NA19239,NA19240 esv3343819 1 239686701 239686714 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673986,essv8673988,essv8673985 M 185 3 0 "" NA12892,NA19239,NA19240 esv3407742 1 239686704 239686723 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678391 M 185 1 0 "" NA19240 esv2762230 1 239698430 239701143 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007028 M 1109 0 1 "" RW_0639 nsv527805 1 239717641 239723308 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704299 M 2026 0 1 "" esv8534 1 239773061 239773253 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30975 M 1 0 0 KMO nsv525983 1 239773156 239778324 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702202 M 2026 0 1 KMO esv7009 1 239844642 239844857 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29450 M 1 0 0 OPN3 esv1007397 1 239844659 239844659 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583758 M 3 1 0 OPN3 HuRef esv1555339 1 239844747 239844747 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3965054 M 2 1 0 OPN3 HuRef nsv159993 1 239854168 239854231 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178571 M 24 OPN3 esv3337219 1 239898824 239898837 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863844 M 185 1 0 WDR64 NA12005 nsv528015 1 239931842 240137354 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704543 M 2026 1 0 EXO1,WDR64 esv2762521 1 239957663 240140845 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005978,essv7005989 M 1109 0 2 EXO1,WDR64 SW_0569,SW_0631 esv2624301 1 239974601 239975747 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5178509 M 1 1 0 WDR64 NA18507 esv3307648 1 239975228 239975229 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7766496,essv7763954,essv7766981 M 185 3 0 WDR64 NA11881,NA12043,NA12814 esv3339965 1 239975232 239975251 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9599125,essv9599114 M 185 2 0 WDR64 NA11881,NA12043 nsv945406 1 240058738 240063043 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1826093,nssv1826131,nssv1826090,nssv1826149,nssv1826091,nssv1826161,nssv1826172,nssv1826153,nssv1826100,nssv1826137,nssv1826173,nssv1826164,nssv1826116,nssv1826159,nssv1826094,nssv1826144,nssv1826110,nssv1826184,nssv1826089,nssv1826148,nssv1826166,nssv1826134,nssv1826101,nssv1826111,nssv1826171,nssv1826113,nssv1826165,nssv1826121,nssv1826119,nssv1826139,nssv1826102,nssv1826157,nssv1826112,nssv1826181,nssv1826099,nssv1826147,nssv1826169,nssv1826126,nssv1826095,nssv1826114,nssv1826103,nssv1826124,nssv1826109,nssv1826176,nssv1826104,nssv1826088,nssv1826117,nssv1826150,nssv1826092,nssv1826162,nssv1826098,nssv1826154,nssv1826097,nssv1826122,nssv1826096,nssv1826136,nssv1826168,nssv1826151,nssv1826174,nssv1826142,nssv1826106,nssv1826152,nssv1826170,nssv1826158,nssv1826105,nssv1826132,nssv1826167,nssv1826163,nssv1826108,nssv1826130,nssv1826107,nssv1826115,nssv1826141,nssv1826146,nssv1826155,nssv1826180,nssv1826129,nssv1826182,nssv1826143,nssv1826133,nssv1826128,nssv1826135,nssv1826177,nssv1826118,nssv1826145,nssv1826178,nssv1826138,nssv1826125,nssv1826127,nssv1826156,nssv1826179,nssv1826160,nssv1826123,nssv1826120,nssv1826183,nssv1826175,nssv1826140 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3358204 1 240071613 240071673 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903857,essv8903859 M 185 2 0 "" NA10851,NA11831 esv3303538 1 240071633 240071634 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760477,essv7759632 M 185 2 0 "" NA10851,NA11831 nsv1008886 1 240082214 240243606 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488825,nssv3488003,nssv3484450 M 29084 3 0 EXO1,MAP1LC3C dgv16e55 1 240091721 240399582 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750830,esv2750831 M 771 7 0 EXO1,MAP1LC3C,PLD5 BEC_614,BEC_74 nsv523554 1 240095724 240163174 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699332 M 2026 0 1 EXO1 nsv1002309 1 240108865 240362258 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501294 M 29084 1 0 EXO1,MAP1LC3C,PLD5 nsv520996 1 240147178 240156418 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv679608,nssv686800,nssv682669 M 2026 0 3 "" nsv947475 1 240186282 240202970 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762246 M 97 1 0 "" HGDP01284 nsv827620 1 240189462 240191259 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440882 M 31 0 1 "" NA18969 nsv508068 1 240191428 240197428 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621492,nssv622308,nssv618527 M 4 0 0 "" CHM,NA10860,NA15510 nsv508703 1 240213563 240318724 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619001 M 4 0 1 MAP1LC3C,PLD5 NA10860 nsv479243 1 240261429 240261429 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016816 M 9 0 0 "" nsv468672 1 240267870 240622572 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543763 M 1557 1 0 PLD5 HGDP00950 nsv470788 1 240267870 240622572 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544427 M 443 1 0 PLD5 HGDP00950 nsv549462 1 240267870 240622572 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174077 M 17421 1 0 PLD5 HGDP00950 nsv511747 1 240286856 240296868 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626393 M 1 0 1 "" 1 nsv945407 1 240287890 240299210 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1826197,nssv1826278,nssv1826269,nssv1826239,nssv1826270,nssv1826210,nssv1826187,nssv1826276,nssv1826213,nssv1826275,nssv1826194,nssv1826257,nssv1826207,nssv1826226,nssv1826262,nssv1826261,nssv1826265,nssv1826235,nssv1826195,nssv1826245,nssv1826198,nssv1826249,nssv1826191,nssv1826241,nssv1826268,nssv1826258,nssv1826206,nssv1826220,nssv1826209,nssv1826256,nssv1826190,nssv1826237,nssv1826189,nssv1826281,nssv1826263,nssv1826254,nssv1826186,nssv1826250,nssv1826266,nssv1826228,nssv1826216,nssv1826223,nssv1826214,nssv1826185,nssv1826201,nssv1826259,nssv1826199,nssv1826218,nssv1826192,nssv1826240,nssv1826200,nssv1826244,nssv1826271,nssv1826211,nssv1826193,nssv1826236,nssv1826202,nssv1826260,nssv1826203,nssv1826221,nssv1826196,nssv1826231,nssv1826267,nssv1826208,nssv1826188,nssv1826219,nssv1826264,nssv1826253,nssv1826205,nssv1826272,nssv1826204,nssv1826247,nssv1826255,nssv1826280,nssv1826217,nssv1826238,nssv1826224,nssv1826233,nssv1826251,nssv1826234,nssv1826229,nssv1826246,nssv1826273,nssv1826279,nssv1826277,nssv1826243,nssv1826212,nssv1826215,nssv1826225,nssv1826227,nssv1826252,nssv1826248,nssv1826222,nssv1826274,nssv1826242,nssv1826230,nssv1826232 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv528016 1 240290022 240517973 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704544 M 2026 1 0 PLD5 nsv476062 1 240319313 240319313 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015950 M 9 1 0 PLD5 NA12878 dgv875n54 1 240332042 240923477 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549464,nsv549463 M 17421 2 0 PLD5 nsv998804 1 240347626 240557985 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499453 M 29084 0 1 PLD5 esv1038787 1 240374075 240374075 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3944129 M 2 1 0 PLD5 HuRef esv1676362 1 240374110 240374185 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4147237 M 2 0 1 PLD5 HuRef esv998850 1 240378125 240378184 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564036 M 3 1 0 PLD5 HuRef nsv515604 1 240381977 240396437 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv664058,nssv663296,nssv687922,nssv680077,nssv701176 M 2026 0 5 PLD5 esv2764195 1 240387283 240396828 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007029,essv7007030 M 1109 0 2 PLD5 RW_0100,RW_0666 esv1979417 1 240395070 240395519 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4758088 M 1 0 1 PLD5 NA18507 esv992990 1 240419666 240423850 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563564 M 3 1 0 PLD5 HuRef nsv1003844 1 240430321 240971378 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485873 M 29084 1 0 PLD5 esv998142 1 240448865 240449355 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586598 M 3 1 0 PLD5 HuRef esv25405 1 240451177 240453040 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18680 M 40 1 0 PLD5 NA06985 esv2089690 1 240455320 240455647 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4844036 M 1 0 1 PLD5 NA18507 nsv945408 1 240477925 240483994 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1825767,nssv1825805,nssv1825770,nssv1825773,nssv1825763,nssv1825788,nssv1825768,nssv1825800,nssv1825777,nssv1825783,nssv1825792,nssv1825778,nssv1825801,nssv1825771,nssv1826283,nssv1825802,nssv1825781,nssv1825786,nssv1825766,nssv1825807,nssv1825779,nssv1825796,nssv1825776,nssv1825803,nssv1825793,nssv1825806,nssv1825769,nssv1825797,nssv1826282,nssv1825794,nssv1825808,nssv1825774,nssv1825789,nssv1825799,nssv1825791,nssv1825790,nssv1825765,nssv1825804,nssv1825784,nssv1825782,nssv1825785,nssv1825780,nssv1825764,nssv1825772,nssv1825798,nssv1825795,nssv1825787,nssv1825775 M 97 10 0 PLD5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945409 1 240483994 240595533 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1825838,nssv1826284,nssv1826324,nssv1826301,nssv1825811,nssv1826294,nssv1826322,nssv1825832,nssv1825817,nssv1825836,nssv1825837,nssv1826304,nssv1825815,nssv1825809,nssv1825840,nssv1825843,nssv1825819,nssv1826303,nssv1825810,nssv1826311,nssv1825831,nssv1826297,nssv1825822,nssv1826302,nssv1826317,nssv1826292,nssv1826320,nssv1826306,nssv1826325,nssv1826307,nssv1826318,nssv1826316,nssv1825820,nssv1826290,nssv1826323,nssv1826312,nssv1825833,nssv1826298,nssv1825812,nssv1826288,nssv1825823,nssv1826293,nssv1825814,nssv1825845,nssv1826321,nssv1826299,nssv1825816,nssv1826286,nssv1825824,nssv1825841,nssv1825821,nssv1825839,nssv1825825,nssv1826309,nssv1825830,nssv1826285,nssv1825818,nssv1825844,nssv1825813,nssv1826295,nssv1825827,nssv1826296,nssv1825826,nssv1826313,nssv1825829,nssv1826315,nssv1826326,nssv1825834,nssv1826319,nssv1826305,nssv1825828,nssv1826314,nssv1826308,nssv1826291,nssv1826300,nssv1826289,nssv1825835,nssv1826310,nssv1826287,nssv1825842 M 97 10 0 PLD5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv5077 1 240508353 240553459 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8221 M 9 0 1 PLD5 NA12156 esv1505070 1 240508631 240508817 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4236023 M 2 0 1 PLD5 HuRef nsv549465 1 240532278 241055780 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739146 M 17421 1 0 PLD5 nsv945411 1 240605068 240608922 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1826398,nssv1826365,nssv1826401,nssv1826387,nssv1826386,nssv1826443,nssv1826446,nssv1826370,nssv1826411,nssv1826367,nssv1826385,nssv1826441,nssv1826450,nssv1826362,nssv1826427,nssv1826380,nssv1826399,nssv1826361,nssv1826431,nssv1826371,nssv1826389,nssv1826439,nssv1826448,nssv1826381,nssv1826391,nssv1826444,nssv1826434,nssv1826437,nssv1826449,nssv1826372,nssv1826406,nssv1826442,nssv1826400,nssv1826374,nssv1826424,nssv1826379,nssv1826447,nssv1826383,nssv1826454,nssv1826364,nssv1826430,nssv1826390,nssv1826435,nssv1826368,nssv1826422,nssv1826440,nssv1826455,nssv1826375,nssv1826396,nssv1826369,nssv1826418,nssv1826366,nssv1826410,nssv1826363,nssv1826423,nssv1826445,nssv1826419,nssv1826373,nssv1826415,nssv1826378,nssv1826432,nssv1826438,nssv1826402,nssv1826377,nssv1826409,nssv1826436,nssv1826394,nssv1826376,nssv1826405,nssv1826360,nssv1826420,nssv1826388,nssv1826393,nssv1826359,nssv1826428,nssv1826452,nssv1826413,nssv1826395,nssv1826416,nssv1826384,nssv1826382,nssv1826407,nssv1826433,nssv1826414,nssv1826453,nssv1826392,nssv1826429,nssv1826408,nssv1826425,nssv1826417,nssv1826403,nssv1826421,nssv1826426,nssv1826451,nssv1826412,nssv1826404,nssv1826397 M 97 10 0 PLD5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv595n100 1 240622022 240650727 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000347,nsv1004989 M 29084 2 0 PLD5 esv3305846 1 240627243 240627244 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7765975 M 185 1 0 PLD5 NA12873 esv3408183 1 240627249 240627268 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9599136 M 185 1 0 PLD5 NA12873 nsv160878 1 240674618 240674618 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179456 M 24 PLD5 esv1006418 1 240674620 240674620 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581998 M 3 1 0 PLD5 HuRef esv1110378 1 240674621 240674621 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3964063 M 2 1 0 PLD5 HuRef nsv5088 1 240686692 240731874 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8227 M 9 0 1 PLD5 NA12156 nsv159213 1 240751543 240751543 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177791 M 24 PLD5 esv3389198 1 240751544 240751595 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7862150 M 185 1 0 PLD5 NA18522 nsv1013636 1 240768190 240785603 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705548 M 29084 0 1 "" esv3332724 1 240777301 240777745 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808955 M 185 1 0 "" NA12878 dgv876n54 1 240780197 241207722 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549467,nsv549466 M 17421 2 0 "" HGDP01215 nsv468683 1 240805706 241207722 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543774 M 1557 1 0 "" HGDP01215 nsv470789 1 240807646 240926303 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544428 M 443 1 0 "" HGDP01215 nsv1013937 1 240816350 240921054 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496131 M 29084 1 0 "" esv3427781 1 240823340 240823349 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863845 M 185 1 0 "" NA12005 nsv525999 1 240829588 240835403 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702225 M 2026 1 0 "" nsv519452 1 240834301 240840987 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696861 M 2026 0 1 "" esv3382805 1 240859287 240859294 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863847,essv7863846 M 185 2 0 "" NA12005,NA18871 nsv468694 1 240864881 240891007 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543785 M 1557 1 0 "" HGDP00958 nsv549468 1 240864881 240891007 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174079 M 17421 1 0 "" HGDP00958 nsv519429 1 240874622 241404839 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696849 M 2026 1 0 CEP170,LOC731275 nsv526980 1 240902792 240908923 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703352 M 2026 0 1 "" nsv549469 1 240908923 241147146 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739148 M 17421 0 1 "" nsv5099 1 240914626 240959748 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8232 M 9 0 1 "" NA12156 esv1225945 1 240926930 240927011 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3867965 M 2 0 1 "" HuRef nsv470790 1 240986538 241375813 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544429 M 443 1 0 CEP170,LOC731275 HGDP01215 nsv945415 1 241002427 241006793 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1826561,nssv1826549,nssv1826572,nssv1826534,nssv1826578,nssv1826598,nssv1826563,nssv1826604,nssv1826586,nssv1826551,nssv1826587,nssv1826531,nssv1826612,nssv1826602,nssv1826543,nssv1826532,nssv1826614,nssv1826597,nssv1826573,nssv1826540,nssv1826575,nssv1826548,nssv1826582,nssv1826600,nssv1826558,nssv1826542,nssv1826609,nssv1826541,nssv1826581,nssv1826533,nssv1826565,nssv1826603,nssv1826562,nssv1826527,nssv1826560,nssv1826539,nssv1826592,nssv1826525,nssv1826547,nssv1826544,nssv1826610,nssv1826601,nssv1826567,nssv1826536,nssv1826564,nssv1826522,nssv1826613,nssv1826605,nssv1826559,nssv1826526,nssv1826611,nssv1826530,nssv1826550,nssv1826523,nssv1826607,nssv1826528,nssv1826596,nssv1826529,nssv1826616,nssv1826606,nssv1826588,nssv1826599,nssv1826579,nssv1826535,nssv1826583,nssv1826521,nssv1826552,nssv1826538,nssv1826615,nssv1826537,nssv1826557,nssv1826524,nssv1826591,nssv1826569,nssv1826580,nssv1826570,nssv1826576,nssv1826593,nssv1826571,nssv1826520,nssv1826585,nssv1826555,nssv1826584,nssv1826546,nssv1826595,nssv1826566,nssv1826608,nssv1826577,nssv1826556,nssv1826589,nssv1826568,nssv1826574,nssv1826554,nssv1826545,nssv1826594,nssv1826590,nssv1826553 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv991378 1 241021196 241051411 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586092 M 3 1 0 "" HuRef esv27772 1 241021196 241051465 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15977,esv17309,esv12280 M 40 0 7 "" NA07045,NA12776,NA18505,NA19114,NA19129,NA19147,NA19190 nsv522809 1 241037619 241043956 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698455 M 2026 0 1 "" esv3327896 1 241044463 241044481 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863848 M 185 1 0 "" NA12005 dgv596n100 1 241049304 241098496 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006355,nsv999778 M 29084 2 0 "" nsv999911 1 241094196 241130753 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705550 M 29084 1 0 "" dgv597n100 1 241098496 241131992 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001040,nsv1009358,nsv1006009 M 29084 3 0 "" esv2759010 1 241103290 241347508 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756892 M 270 16 23 LOC731275 NA07034,NA07048,NA07357,NA11839,NA11993,NA12003,NA12043,NA12264,NA12716,NA12814,NA12864,NA12872,NA18502,NA18508,NA18540,NA18547,NA18555,NA18564,NA18572,NA18579,NA18582,NA18592,NA18594,NA18861,NA18862,NA18870,NA18942,NA18968,NA18973,NA18976,NA18978,NA18991,NA18997,NA18998,NA19094,NA19098,NA19173,NA19203,NA19238 esv2763747 1 241103290 241349107 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006066,essv7006122,essv7006144,essv7006133,essv7006011,essv7006044,essv7006089,essv7006022,essv7006033,essv7006111,essv7006055,essv7006100,essv7006155,essv7006078,essv7006000 M 1109 14 1 LOC731275 SW_0029,SW_0061,SW_0271,SW_0831,SW_1049,SW_1354,SW_1374,SW_1381,SW_1389,SW_1396,SW_1404,SW_1459,SW_1484,SW_1501,SW_1547 nsv9003 1 241107180 241255045 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv24283,nssv23066,nssv23062,nssv25460,nssv26187,nssv23691,nssv27405,nssv25183,nssv27731,nssv22435,nssv23371,nssv27141,nssv23375,nssv25971,nssv28160,nssv25163,nssv23382,nssv28353 M 31 0 18 "" NA10839,NA10847,NA10863,NA11830,NA12740,NA12802,NA18502,NA18517,NA18537,NA18552,NA18564,NA18942,NA18972,NA18975,NA18980,NA19132,NA19221,NA19240 esv32774 1 241108566 241534705 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv94225,essv97797,essv93388,essv94365,essv95786,essv95070,essv96963,essv95460,essv100692,essv94832,essv101563,essv96006,essv92940,essv98148 M 51 14 0 CEP170,LOC731275,SDCCAG8 21603,21656,21721,21772,21791,21808,21817,21837,21847,21911,21939,22127,22170,22394 esv23865 1 241108917 241331740 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10415,esv9990,esv10021,esv16724,esv21383,esv18903,esv13791,esv18826 M 40 3 34 LOC731275 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18508,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv3414348 1 241110412 241110412 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740951 M 185 1 0 "" NA19240 dgv598n100 1 241114167 241125969 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008913,nsv1004755 M 29084 2 0 "" dgv599n100 1 241114167 241131992 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007263,nsv1000004,nsv1014645,nsv1006622 M 29084 13 0 "" nsv1010539 1 241115351 241125766 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484263,nssv3491047 M 29084 1 1 "" dgv600n100 1 241115351 241153729 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007393,nsv1015097 M 29084 3 0 "" nsv1013001 1 241115351 241289846 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705559 M 29084 1 0 LOC731275 nsv5110 1 241116505 241149113 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6205 M 9 1 0 "" NA12156 dgv19n17 1 241119144 241137354 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437357,nsv437369,nsv437380 M 60 0 3 "" NA07019,NA10859,NA12753 nsv438159 1 241125523 241131051 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469986,nssv469964,nssv470041,nssv469997,nssv470019,nssv470063,nssv470008,nssv470030,nssv469975,nssv470052 M 269 0 10 "" NA07019,NA07022,NA10856,NA10859,NA10860,NA11830,NA11881,NA11993,NA12753,NA12762 nsv1008948 1 241125766 241152513 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502395 M 29084 0 1 "" nsv437391 1 241128142 241132553 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467272 M 60 0 1 "" NA10856 nsv518969 1 241156159 241159058 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696437 M 2026 0 1 "" nsv1012884 1 241176471 241324674 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493870 M 29084 0 1 LOC731275 esv1282544 1 241181602 241181602 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4131050 M 2 1 0 "" HuRef dgv877n54 1 241186162 241196464 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549470,nsv549473 M 17421 2 0 "" esv1205493 1 241186515 241186515 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3807382 M 2 1 0 "" HuRef dgv878n54 1 241187008 241194267 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549471,nsv549474,nsv549472 M 17421 0 3 "" dgv879n54 1 241188388 241196871 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549477,nsv549476,nsv549475 M 17421 0 3 "" nsv549478 1 241192660 241196394 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739157 M 17421 0 1 "" nsv511748 1 241193637 241196657 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626394 M 1 0 1 "" 1 esv3891281 1 241199529 241325042 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25790087 M 3017 1 0 LOC731275 nsv945418 1 241202616 241206663 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1826706,nssv1825301,nssv1825275,nssv1826702,nssv1825260,nssv1825302,nssv1826707,nssv1826712,nssv1825263,nssv1826685,nssv1825253,nssv1826683,nssv1825284,nssv1826682,nssv1825282,nssv1825299,nssv1825265,nssv1826701,nssv1825291,nssv1825300,nssv1826715,nssv1826684,nssv1825286,nssv1825294,nssv1825270,nssv1825297,nssv1826714,nssv1826703,nssv1825283,nssv1826709,nssv1825272,nssv1826686,nssv1825287,nssv1826700,nssv1825313,nssv1826694,nssv1825280,nssv1825298,nssv1825266,nssv1826705,nssv1825305,nssv1826696,nssv1825273,nssv1826691,nssv1825279,nssv1825296,nssv1825306,nssv1826697,nssv1825256,nssv1825303,nssv1826704,nssv1826689,nssv1825261,nssv1826688,nssv1825276,nssv1826687,nssv1825257,nssv1826692,nssv1825274,nssv1826710,nssv1825278,nssv1825295,nssv1826711,nssv1826699,nssv1825311,nssv1826698,nssv1825254,nssv1826693,nssv1825262,nssv1826690,nssv1825289,nssv1826695,nssv1825269,nssv1825310,nssv1825268,nssv1825308,nssv1825258,nssv1825309,nssv1825264,nssv1826713,nssv1825255,nssv1826708,nssv1825307,nssv1825288,nssv1825271,nssv1825259,nssv1825293,nssv1825304,nssv1825312,nssv1825267,nssv1825285,nssv1825292,nssv1825252,nssv1825290,nssv1826681,nssv1825277,nssv1825281 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945421 1 241220136 241230483 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604881,nssv2604883,nssv2604877,nssv2604878,nssv2604882,nssv2604885,nssv2604879,nssv2604876,nssv2604880,nssv2604875,nssv2604884 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945419 1 241220136 241275662 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1825336,nssv1825364,nssv1825389,nssv1825363,nssv1825327,nssv1825374,nssv1825391,nssv1825383,nssv1825385,nssv1825339,nssv1825328,nssv1825378,nssv1825335,nssv1825366,nssv1825343,nssv1825346,nssv1825392,nssv1825365,nssv1825325,nssv1825357,nssv1825387,nssv1825368,nssv1825390,nssv1825372,nssv1825384,nssv1825344,nssv1825329,nssv1825348,nssv1825330,nssv1825340,nssv1825323,nssv1825381,nssv1825338,nssv1825360,nssv1825316,nssv1825350,nssv1825319,nssv1825379,nssv1825345,nssv1825370,nssv1825321,nssv1825359,nssv1825388,nssv1825362,nssv1825320,nssv1825375,nssv1825317,nssv1825380,nssv1825318,nssv1825376,nssv1825386,nssv1825347,nssv1825322,nssv1825314,nssv1825315,nssv1825367,nssv1825324,nssv1825373,nssv1825393,nssv1825377,nssv1825331,nssv1825353,nssv1825332,nssv1825355,nssv1825334,nssv1825369,nssv1825342,nssv1825337,nssv1825326,nssv1825371,nssv1825333,nssv1825354,nssv1825352,nssv1825356,nssv1825351,nssv1825361,nssv1825382,nssv1825341,nssv1825358,nssv1825349 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv433351 1 241228887 241325042 CNV gain Cooper_et_al_2008 18776910 SNP array nssv463232 M 9 1 0 LOC731275 NA19240 nsv947078 1 241230483 241233015 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604894,nssv2604887,nssv2604895,nssv2604888,nssv2604890,nssv2604889,nssv2604898,nssv2604893,nssv2604897,nssv2604892,nssv2604891,nssv2604896 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947079 1 241233015 241233515 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604909,nssv2604901,nssv2604910,nssv2604900,nssv2604906,nssv2604905,nssv2604907,nssv2604904,nssv2604903,nssv2604899,nssv2604902,nssv2604908 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947080 1 241236200 241239392 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604920,nssv2604919,nssv2604918,nssv2604915,nssv2604917,nssv2604911,nssv2604914,nssv2604916,nssv2604921,nssv2604912,nssv2604913 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947082 1 241240166 241242129 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604932,nssv2604924,nssv2604929,nssv2604928,nssv2604926,nssv2604927,nssv2604933,nssv2604923,nssv2604930,nssv2604931,nssv2604925 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947084 1 241242129 241245921 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604945,nssv2604962,nssv2604942,nssv2604953,nssv2604937,nssv2604943,nssv2604941,nssv2604969,nssv2604944,nssv2604947,nssv2604938,nssv2604972,nssv2604975,nssv2604973,nssv2604980,nssv2604956,nssv2604977,nssv2604965,nssv2604959,nssv2604967,nssv2604940,nssv2604964,nssv2604979,nssv2604971,nssv2604949,nssv2604957,nssv2604961,nssv2604981,nssv2604958,nssv2604950,nssv2604966,nssv2604952,nssv2604935,nssv2604936,nssv2604955,nssv2604963,nssv2604974,nssv2604982,nssv2604970,nssv2604948,nssv2604939,nssv2604978,nssv2604951,nssv2604976,nssv2604960,nssv2604968,nssv2604954,nssv2604946 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947085 1 241245921 241247277 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2604987,nssv2605029,nssv2604986,nssv2605008,nssv2604990,nssv2604998,nssv2604993,nssv2605031,nssv2604991,nssv2605013,nssv2604994,nssv2605030,nssv2605007,nssv2605026,nssv2605023,nssv2605021,nssv2605000,nssv2605018,nssv2604997,nssv2604984,nssv2604995,nssv2605017,nssv2605010,nssv2605025,nssv2605009,nssv2604999,nssv2605019,nssv2605011,nssv2605014,nssv2605003,nssv2605015,nssv2604989,nssv2605004,nssv2605024,nssv2605028,nssv2604985,nssv2604996,nssv2605002,nssv2605012,nssv2605001,nssv2605022,nssv2605020,nssv2604983,nssv2604988,nssv2605006,nssv2604992,nssv2605005,nssv2605027,nssv2605016 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947087 1 241247277 241257912 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605680,nssv2605686,nssv2605673,nssv2605717,nssv2605677,nssv2605713,nssv2605672,nssv2605706,nssv2605676,nssv2605710,nssv2605679,nssv2605690,nssv2605691,nssv2605707,nssv2605708,nssv2605712,nssv2605700,nssv2605715,nssv2605674,nssv2605698,nssv2605682,nssv2605705,nssv2605693,nssv2605704,nssv2605714,nssv2605703,nssv2605695,nssv2605716,nssv2605681,nssv2605696,nssv2605689,nssv2605709,nssv2605683,nssv2605697,nssv2605678,nssv2605670,nssv2605694,nssv2605688,nssv2605671,nssv2605711,nssv2605699,nssv2605675,nssv2605685,nssv2605702,nssv2605692,nssv2605701,nssv2605684,nssv2605687 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947088 1 241257912 241262153 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605728,nssv2605735,nssv2605721,nssv2605737,nssv2605722,nssv2605738,nssv2605725,nssv2605754,nssv2605729,nssv2605757,nssv2605726,nssv2605724,nssv2605756,nssv2605761,nssv2605741,nssv2605765,nssv2605719,nssv2605718,nssv2605763,nssv2605736,nssv2605720,nssv2605752,nssv2605742,nssv2605746,nssv2605747,nssv2605733,nssv2605732,nssv2605764,nssv2605753,nssv2605744,nssv2605743,nssv2605760,nssv2605759,nssv2605766,nssv2605739,nssv2605730,nssv2605755,nssv2605731,nssv2605734,nssv2605740,nssv2605751,nssv2605749,nssv2605748,nssv2605762,nssv2605758,nssv2605750,nssv2605745,nssv2605723,nssv2605727 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947090 1 241262153 241270523 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605778,nssv2605785,nssv2605771,nssv2605780,nssv2605770,nssv2605790,nssv2605777,nssv2605802,nssv2605775,nssv2605793,nssv2605774,nssv2605773,nssv2605808,nssv2605807,nssv2605792,nssv2605803,nssv2605779,nssv2605810,nssv2605768,nssv2605784,nssv2605791,nssv2605781,nssv2605796,nssv2605795,nssv2605813,nssv2605772,nssv2605783,nssv2605801,nssv2605782,nssv2605815,nssv2605804,nssv2605797,nssv2605794,nssv2605811,nssv2605809,nssv2605814,nssv2605805,nssv2605799,nssv2605786,nssv2605788,nssv2605769,nssv2605787,nssv2605798,nssv2605806,nssv2605800,nssv2605776,nssv2605812,nssv2605789 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv506988 1 241262726 241268726 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623297 M 4 0 0 "" NA18994 nsv945424 1 241275662 241282145 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2605829,nssv2605856,nssv2605818,nssv2605879,nssv2605889,nssv2605855,nssv2605838,nssv2605848,nssv2605824,nssv2605858,nssv2605896,nssv2605849,nssv2605827,nssv2605853,nssv2605893,nssv2605875,nssv2605845,nssv2605859,nssv2605828,nssv2605870,nssv2605821,nssv2605881,nssv2605823,nssv2605851,nssv2605835,nssv2605868,nssv2605820,nssv2605847,nssv2605822,nssv2605860,nssv2605832,nssv2605872,nssv2605839,nssv2605886,nssv2605846,nssv2605862,nssv2605831,nssv2605869,nssv2605894,nssv2605882,nssv2605890,nssv2605865,nssv2605895,nssv2605880,nssv2605888,nssv2605843,nssv2605837,nssv2605874,nssv2605891,nssv2605871,nssv2605830,nssv2605850,nssv2605841,nssv2605885,nssv2605887,nssv2605844,nssv2605826,nssv2605873,nssv2605825,nssv2605861,nssv2605833,nssv2605864,nssv2605834,nssv2605857,nssv2605819,nssv2605817,nssv2605836,nssv2605877,nssv2605892,nssv2605840,nssv2605854,nssv2605876,nssv2605863,nssv2605883,nssv2605867,nssv2605878,nssv2605866,nssv2605842,nssv2605884,nssv2605852 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945422 1 241275662 241332686 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827024,nssv1827068,nssv1827089,nssv1827052,nssv1827088,nssv1827034,nssv1827025,nssv1827077,nssv1827081,nssv1827044,nssv1825395,nssv1827038,nssv1825407,nssv1827039,nssv1825408,nssv1827080,nssv1825397,nssv1827047,nssv1825409,nssv1827046,nssv1827084,nssv1827069,nssv1825399,nssv1827072,nssv1827026,nssv1827055,nssv1827035,nssv1827041,nssv1827032,nssv1827054,nssv1825401,nssv1827079,nssv1827028,nssv1827073,nssv1825410,nssv1827064,nssv1827087,nssv1827051,nssv1827085,nssv1827049,nssv1825396,nssv1827060,nssv1825403,nssv1827071,nssv1827086,nssv1827036,nssv1825402,nssv1827031,nssv1827033,nssv1827059,nssv1827083,nssv1827078,nssv1825404,nssv1827092,nssv1825411,nssv1827062,nssv1827082,nssv1827053,nssv1827090,nssv1827029,nssv1825412,nssv1827096,nssv1825400,nssv1827067,nssv1825406,nssv1827066,nssv1825398,nssv1827056,nssv1825405,nssv1827093,nssv1825413,nssv1827098,nssv1827074,nssv1827042,nssv1827065,nssv1825394,nssv1827057,nssv1827048,nssv1827094,nssv1827097,nssv1827091,nssv1827095,nssv1827099,nssv1827070,nssv1827100,nssv1827027,nssv1827040,nssv1827050,nssv1827061,nssv1827030,nssv1827045,nssv1827063,nssv1827037,nssv1827043,nssv1827075,nssv1827076,nssv1827058 M 97 10 0 LOC731275 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1442536 1 241331774 241331823 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3935382 M 2 0 1 "" HuRef nsv1001378 1 241374277 241452482 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485701 M 29084 1 0 CEP170 nsv517939 1 241443380 241589529 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695351 M 2026 1 0 CEP170,MIR4677,SDCCAG8 nsv1001488 1 241457448 241649897 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500812 M 29084 0 1 CEP170,MIR4677,SDCCAG8 esv3432619 1 241513834 241513876 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863849 M 185 1 0 SDCCAG8 NA12005 nsv506989 1 241547156 241553156 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617553,nssv623298,nssv620682 M 4 0 0 SDCCAG8 CHM,NA15510,NA18994 nsv159918 1 241568906 241568959 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178496 M 24 SDCCAG8 esv991124 1 241568908 241568961 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578558 M 3 0 1 SDCCAG8 HuRef esv1353364 1 241569015 241569069 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4314233 M 2 0 1 SDCCAG8 HuRef nsv833070 1 241569734 241767426 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441748 M 95 1 0 AKT3,MIR4677,SDCCAG8 nsv472026 1 241642897 241642897 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017526 M 9 1 0 SDCCAG8 NA18555 nsv549479 1 241684940 241703962 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739158 M 17421 0 1 SDCCAG8 nsv1013039 1 241690546 241731194 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494036 M 29084 1 0 AKT3,SDCCAG8 esv25013 1 241703401 241704384 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19437 M 40 0 5 SDCCAG8 NA06985,NA12828,NA15510,NA18907,NA19129 nsv820437 1 241703401 241704384 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421069 M 1 0 1 SDCCAG8 NA10851 nsv512760 1 241710724 241711539 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625390 M 1 1 0 SDCCAG8 1 dgv601n100 1 241724571 241745012 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006961,nsv1009968 M 29084 2 0 AKT3,SDCCAG8 nsv1010479 1 241724653 241745012 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490183 M 29084 0 1 AKT3,SDCCAG8 esv2575701 1 241755291 241756105 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5198141 M 1 1 0 AKT3 NA18507 nsv833081 1 241761059 241887674 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441749 M 95 1 0 AKT3 nsv5121 1 241814052 241858669 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8247 M 9 0 1 AKT3 NA12156 esv274931 1 241826998 241833609 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586087 M 1250 0 1 AKT3 nsv833093 1 241842909 242045453 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441750 M 95 0 1 AKT3 nsv511135 1 241848467 241864422 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624599 M 1 0 1 AKT3 1 esv2606093 1 241849043 241850808 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5343863 M 1 0 1 AKT3 NA18507 esv7595 1 241849136 241850633 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30036 M 1 0 0 AKT3 nsv511749 1 241849191 241850548 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626395 M 1 0 1 AKT3 1 esv2182482 1 241849208 241850552 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4963503 M 1 0 1 AKT3 NA18507 esv5138 1 241849280 241850608 CNV loss Wang_et_al_2008 18987735 Sequencing essv27579 M 1 0 1 AKT3 YH esv28291 1 241849373 241850488 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19645 M 40 23 0 AKT3 NA06985,NA11931,NA12239,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv996767 1 241849373 241850488 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586291 M 3 0 1 AKT3 HuRef nsv821560 1 241849373 241850488 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421080 M 1 0 1 AKT3 NA10851 nsv549480 1 241849397 241850171 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739163,nssv739162,nssv739161,nssv739160,nssv739159,nssv739176,nssv739172,nssv739202,nssv739166,nssv739165,nssv739164,nssv739167,nssv739169,nssv739171,nssv739168,nssv739170,nssv739174,nssv739229,nssv739173,nssv739175,nssv739180,nssv739179,nssv739189,nssv739177,nssv739178,nssv739181,nssv739186,nssv739182,nssv739185,nssv739188,nssv739184,nssv739183,nssv739187,nssv739192,nssv739200,nssv739190,nssv739191,nssv739199,nssv739198,nssv739194,nssv739193,nssv739195,nssv739201,nssv739197,nssv739196,nssv739213,nssv739205,nssv739203,nssv739204,nssv739228,nssv739212,nssv739211,nssv739210,nssv739206,nssv739209,nssv739208,nssv739207,nssv739214,nssv739215,nssv739220,nssv739216,nssv739219,nssv739218,nssv739227,nssv739221,nssv739217,nssv739224,nssv739223,nssv739222,nssv739226,nssv739225,nssv739236,nssv739230,nssv739243,nssv739231,nssv739235,nssv739234,nssv739232,nssv739233,nssv739242,nssv739240,nssv739241,nssv739239,nssv739238,nssv739237,nssv739245,nssv739244 M 17421 0 87 AKT3 dgv880n54 1 241849397 241850355 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549481,nsv549482,nsv549484,nsv549486,nsv549487,nsv549485,nsv549489 M 17421 45 0 AKT3 nsv549483 1 241849452 241850119 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739260,nssv739259 M 17421 2 0 AKT3 dgv881n54 1 241849618 241850171 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549488,nsv549490 M 17421 0 124 AKT3 nsv549491 1 241849733 241850355 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739417 M 17421 1 0 AKT3 nsv1002245 1 241866400 242033850 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705562 M 29084 0 1 AKT3 esv3427368 1 241882698 241882719 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863850 M 185 1 0 AKT3 NA12005 nsv522102 1 241887987 242083988 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694874 M 2026 1 0 AKT3 esv275568 1 241920807 241929719 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585356 M 1250 0 1 AKT3 nsv997627 1 241986396 242065097 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485390 M 29084 1 0 AKT3 esv2648270 1 241987070 241988526 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5222578 M 1 0 1 AKT3 NA18507 nsv833104 1 242009371 242158921 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441751,nssv1441753 M 95 1 1 AKT3,LOC339529 nsv509724 1 242029315 242082523 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619831,nssv621115 M 4 2 0 AKT3 NA10860,NA15510 nsv480457 1 242036950 242036950 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018709 M 9 0 0 AKT3 nsv5132 1 242050461 242083987 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3845,nssv10580 M 9 2 0 AKT3 NA12878,NA18956 esv990522 1 242074394 242075576 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565556 M 3 1 0 "" HuRef nsv481034 1 242111178 242111178 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014753 M 9 0 0 "" nsv512761 1 242209432 242209667 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625391 M 1 1 0 LOC339529 1 esv3431844 1 242209433 242209795 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652071 M 185 1 0 LOC339529 NA19240 esv1523991 1 242209547 242209547 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3664805 M 2 1 0 LOC339529 HuRef nsv5143 1 242213295 242227022 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4610 M 9 0 1 LOC339529 NA19129 nsv160658 1 242228647 242228647 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179236 M 24 LOC339529 esv3360870 1 242228648 242228696 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7862156,essv7862155,essv7862151,essv7862152 M 185 4 0 LOC339529 NA11992,NA18522,NA18961,NA19172 esv1639370 1 242228715 242228715 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3815933 M 2 1 0 LOC339529 HuRef nsv827631 1 242296663 242297758 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431879 M 31 0 1 "" AK20 esv29748 1 242353965 242354569 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19387 M 40 0 1 "" NA19114 nsv519230 1 242381483 242389010 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696721 M 2026 0 1 "" nsv477294 1 242392839 242392839 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016245 M 9 1 0 "" NA18517 esv3310133 1 242397796 242397797 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837992,essv7836941 M 185 2 0 "" NA12878,NA19239 esv3343689 1 242397796 242397802 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673989,essv8673990 M 185 2 0 "" NA19239,NA19240 esv3397399 1 242412052 242413950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692202 M 185 1 0 "" NA19239 nsv833115 1 242476207 242641682 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441754 M 95 1 0 ADSS,C1orf100 nsv473969 1 242490951 242490951 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015482 M 9 1 0 "" NA12156 esv1212797 1 242493381 242493381 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3938505 M 2 1 0 "" HuRef nsv1014777 1 242538714 242598703 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498085 M 29084 1 0 C1orf100 nsv522504 1 242543378 242558464 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705872 M 2026 0 1 "" esv2762231 1 242559534 242604306 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7007031 M 1109 1 0 C1orf100 RW_0067 nsv1008760 1 242582935 242600084 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502213 M 29084 1 0 C1orf100 nsv1012985 1 242582935 242631649 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493981 M 29084 1 0 C1orf100 esv24742 1 242583567 242586158 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19967 M 40 2 0 C1orf100 NA12749,NA12878 esv3891292 1 242599439 242637008 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788719,essv25788948 M 3017 2 0 C1orf100 nsv516557 1 242611441 242768123 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705662,nssv688542,nssv669142 M 2026 3 0 ADSS,C1orf100,C1orf101 esv3391108 1 242617852 242617863 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863851 M 185 1 0 C1orf100 NA12005 nsv818866 1 242705151 242728100 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417827 M 112 1 0 C1orf101 NA18852 esv2107521 1 242812637 242813088 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4776669 M 1 0 1 C1orf101 NA18507 esv992950 1 242812835 242812886 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3576277 M 3 0 1 C1orf101 HuRef esv1291880 1 242812850 242812902 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3686631 M 2 0 1 C1orf101 HuRef esv24695 1 242813686 242815144 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15788 M 40 0 3 C1orf101 NA18916,NA19108,NA19129 nsv945426 1 242828150 242829985 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827201,nssv1827136,nssv1827190,nssv1827218,nssv1827159,nssv1827141,nssv1827169,nssv1827217,nssv1827193,nssv1827162,nssv1827171,nssv1827135,nssv1827204,nssv1827139,nssv1827174,nssv1827145,nssv1827187,nssv1827137,nssv1827184,nssv1827134,nssv1827177,nssv1827213,nssv1827172,nssv1827142,nssv1827166,nssv1827214,nssv1827206,nssv1827155,nssv1827163,nssv1827154,nssv1827181,nssv1827146,nssv1827183,nssv1827152,nssv1827229,nssv1827149,nssv1827209,nssv1827216,nssv1827225,nssv1827138,nssv1827178,nssv1827215,nssv1827198,nssv1827161,nssv1827160,nssv1827157,nssv1827175,nssv1827153,nssv1827205,nssv1827210,nssv1827176,nssv1827212,nssv1827202,nssv1827140,nssv1827170,nssv1827143,nssv1827179,nssv1827211,nssv1827189,nssv1827219,nssv1827197,nssv1827144,nssv1827182,nssv1827147,nssv1827180,nssv1827164,nssv1827191,nssv1827151,nssv1827196,nssv1827150,nssv1827173,nssv1827148,nssv1827167,nssv1827207,nssv1827200,nssv1827165,nssv1827208,nssv1827156,nssv1827221,nssv1827226,nssv1827227,nssv1827133,nssv1827185,nssv1827222,nssv1827158,nssv1827186,nssv1827220,nssv1827168,nssv1827203,nssv1827194,nssv1827224,nssv1827223,nssv1827192,nssv1827195,nssv1827199,nssv1827228,nssv1827188 M 97 10 0 C1orf101 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv528017 1 242848355 242905445 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704545 M 2026 1 0 C1orf101,DESI2 esv1134718 1 242850953 242851009 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3915137 M 2 0 1 C1orf101 HuRef nsv549492 1 242858692 242880094 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739418 M 17421 0 1 C1orf101 nsv5154 1 242860358 242891139 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10581 M 9 1 0 C1orf101,DESI2 NA18956 esv2639096 1 242861796 242863262 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5332641 M 1 0 1 C1orf101 NA18507 esv6188 1 242870938 242871081 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28629 M 1 0 0 "" nsv5165 1 242921712 242953678 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6213 M 9 1 0 DESI2 NA12156 esv1061538 1 242948609 242948609 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4154024 M 2 1 0 "" HuRef nsv549493 1 242951908 243086908 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739419 M 17421 1 0 COX20,HNRNPU,HNRNPU-AS1 nsv827642 1 242961663 242966144 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437276 M 31 0 1 "" NA18949 esv3366086 1 243023266 243024118 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652072 M 185 1 0 "" NA19240 nsv5176 1 243028299 243060193 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5059 M 9 1 0 "" NA19129 esv275279 1 243043474 243054848 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585724 M 1250 0 1 "" nsv827653 1 243121282 243130326 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437277 M 31 1 0 "" NA18949 esv22057 1 243124604 243263523 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14367 M 40 0 1 EFCAB2 NA12776 esv2253871 1 243144015 243144489 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4506427 M 1 0 1 "" NA18507 dgv602n100 1 243166122 243769907 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1012850,nsv1001232,nsv1002289,nsv1007273,nsv1009538 M 29084 5 0 EFCAB2,KIF26B nsv472226 1 243168950 243168950 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019963 M 9 1 0 "" NA18555 esv1024607 1 243171365 243171365 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4339372 M 2 1 0 "" HuRef nsv5188 1 243192473 243224210 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5065 M 9 1 0 EFCAB2 NA19129 nsv471922 1 243198757 243198757 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016258 M 9 1 0 "" NA18555 nsv549494 1 243221767 243493282 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739420 M 17421 1 0 EFCAB2,KIF26B nsv827664 1 243239502 243244684 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1428876 M 31 0 1 EFCAB2 AK12 esv3442501 1 243242407 243242417 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903868,essv8903865,essv8903864,essv8903866,essv8903862,essv8903867,essv8903860,essv8903861,essv8903863 M 185 9 0 EFCAB2 NA18498,NA18501,NA18502,NA18508,NA18516,NA18517,NA19093,NA19138,NA19147 esv3305006 1 243242410 243242411 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7829761,essv7814200,essv7828208,essv7806906,essv7831259,essv7825917,essv7781288,essv7789800,essv7825066,essv7812131,essv7832199,essv7771517 M 185 12 0 EFCAB2 NA18498,NA18501,NA18502,NA18508,NA18516,NA18517,NA19093,NA19138,NA19143,NA19147,NA19238,NA19240 esv3309718 1 243242415 243242416 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841816,essv7842413 M 185 2 0 EFCAB2 NA19238,NA19240 esv3324980 1 243242420 243242428 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673991,essv8673992 M 185 2 0 EFCAB2 NA19238,NA19240 nsv473048 1 243323085 243323085 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011729 M 9 1 0 EFCAB2 NA19129 esv24561 1 243332881 243333626 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14734 M 40 0 2 EFCAB2 NA19190,NA19225 nsv515634 1 243382842 243394708 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705443,nssv686032,nssv664179,nssv669679 M 2026 0 4 KIF26B nsv524642 1 243382842 243403395 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700608 M 2026 0 1 KIF26B esv3891315 1 243394708 243950774 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796075 M 3017 0 1 KIF26B nsv1002555 1 243413594 243434157 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501584 M 29084 0 1 KIF26B nsv1010191 1 243413594 243451789 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491899 M 29084 0 1 KIF26B nsv528375 1 243417681 243419593 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704962 M 2026 0 1 KIF26B nsv5199 1 243441173 243475380 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2799 M 9 1 0 KIF26B NA18555 nsv1001831 1 243453478 243581362 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705563 M 29084 0 1 KIF26B esv1964314 1 243499971 243500452 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4968691 M 1 0 1 KIF26B NA18507 esv4377 1 243500097 243500334 CNV loss Wang_et_al_2008 18987735 Sequencing essv26818 M 1 0 1 KIF26B YH esv1366991 1 243500198 243500290 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3867044 M 2 0 1 KIF26B HuRef esv2421654 1 243505830 243509160 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5080619,essv5089378,essv5131426,essv5020352,essv5121152,essv5146876,essv5137346,essv5127218,essv5053224,essv5148657,essv5123710,essv5006165,essv5055029,essv5124836,essv5120129 M 1184 0 15 KIF26B NA17967,NA17995,NA18140,NA18537,NA18602,NA18639,NA18647,NA18951,NA18965,NA18975,NA18979,NA18995,NA19063,NA19070,NA19074 nsv441744 1 243505832 243509159 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656918,nssv1656916,nssv1656920,nssv1656922,nssv1656915,nssv1656921,nssv1656919,nssv1656917 M 270 0 8 KIF26B NA18537,NA18547,NA18951,NA18965,NA18975,NA18992,NA18995,NA19012 dgv113n67 1 243506982 243509734 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827686,nsv827675 M 31 0 3 KIF26B NA18537,NA18547,NA18951 nsv527082 1 243528382 243528871 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703461 M 2026 0 1 KIF26B nsv549495 1 243542401 243558029 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739421 M 17421 0 1 KIF26B nsv1015005 1 243552708 243604732 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498304 M 29084 0 1 KIF26B nsv5210 1 243589749 243621822 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1805 M 9 1 0 KIF26B NA18555 nsv549496 1 243623917 243697037 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739422 M 17421 1 0 KIF26B esv28270 1 243641232 243641895 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15412 M 40 1 0 KIF26B NA12004 nsv7191 1 243642870 244003129 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6222 M 9 0 0 KIF26B,SMYD3 NA12156 nsv1011796 1 243657819 243878590 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495386 M 29084 1 0 KIF26B dgv326e59 1 243672552 243674250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3391547,esv3373813,esv3434048,esv3411697 M 185 4 0 KIF26B NA12878,NA12891,NA19239,NA19240 esv29096 1 243672564 243674450 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20002 M 40 0 8 KIF26B NA06985,NA11894,NA11931,NA11993,NA12004,NA12006,NA12776,NA15510 nsv161160 1 243672570 243672712 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179738 M 24 KIF26B esv1635429 1 243672918 243672976 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3606638 M 2 0 1 KIF26B HuRef esv2606381 1 243673217 243673274 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5324219 M 1 0 1 KIF26B NA18507 esv1457319 1 243673450 243673596 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3610327 M 2 0 1 KIF26B HuRef esv1330272 1 243673620 243673681 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3632627 M 2 0 1 KIF26B HuRef esv1756438 1 243673760 243673870 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4241935 M 2 0 1 KIF26B HuRef dgv882n54 1 243699625 243716464 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549497,nsv549500,nsv549498,nsv549499,nsv549501 M 17421 0 8 KIF26B 1780854436_A,HGDP00029,HGDP00094 dgv62n27 1 243700890 243714349 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv468705,nsv468739,nsv468728,nsv468750,nsv468716 M 1557 0 5 KIF26B 1780854436_A,HGDP00029,HGDP00094,HGDP00558,HGDP00683 dgv883n54 1 243702682 243714432 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549509,nsv549508,nsv549510,nsv549502,nsv549503 M 17421 0 64 KIF26B HGDP00558,HGDP00683 esv2763758 1 243703033 243716274 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006222,essv7006288,essv7006334,essv7006266,essv7006255,essv7006189,essv7006177,essv7006323,essv7006166,essv7006356,essv7006211,essv7006244,essv7006233,essv7006312,essv7006277,essv7006301,essv7006200,essv7006345,essv7006367 M 1109 0 19 KIF26B SW_0057,SW_0062,SW_0088,SW_0121,SW_0149,SW_0201,SW_0341,SW_0640,SW_0646,SW_0787,SW_0828,SW_0890,SW_1115,SW_1116,SW_1138,SW_1176,SW_1211,SW_1274,SW_1470 esv22570 1 243703417 243714597 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11268 M 40 0 1 KIF26B NA11993 dgv884n54 1 243703662 243711865 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549507,nsv549506,nsv549505,nsv549504 M 17421 0 7 KIF26B nsv517322 1 243703662 243714349 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv651714,nssv687836,nssv691284,nssv670704,nssv652317,nssv691664,nssv692741,nssv684778,nssv674994,nssv683394,nssv678388,nssv668784,nssv690751,nssv652813,nssv678614,nssv687556,nssv693423,nssv671356,nssv654897,nssv676441,nssv688589,nssv669331,nssv677830,nssv671438,nssv659653,nssv688436,nssv670359,nssv693509,nssv655323,nssv657769,nssv669680,nssv664574,nssv658836,nssv684815,nssv691139,nssv661820,nssv660984,nssv658848,nssv689138,nssv664273,nssv686971,nssv689110,nssv669269,nssv691042,nssv659171,nssv690947,nssv676675,nssv670926,nssv683099,nssv683553,nssv672787 M 2026 0 51 KIF26B nsv818877 1 243703662 243714349 CNV loss Wang_et_al_2007 17921354 SNP array nssv1415813,nssv1415812 M 112 0 2 KIF26B NA10860,NA11993 esv3891304 1 243703662 243716464 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785944,essv25787750,essv25780870 M 3017 0 3 KIF26B nsv468761 1 243703662 243720615 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543852 M 1557 0 1 KIF26B HGDP00195 nsv549511 1 243703662 243720615 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174085,nssv739497 M 17421 0 2 KIF26B HGDP00195 nsv549512 1 243703662 243730142 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739498 M 17421 0 1 KIF26B nsv470791 1 243703662 243750298 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544430 M 443 0 1 KIF26B HGDP00599 nsv441745 1 243703665 243713527 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656923,nssv1656926,nssv1656924,nssv1656925 M 270 0 4 KIF26B NA10860,NA11830,NA11840,NA11993 dgv885n54 1 243706253 243714432 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549516,nsv549515,nsv549514,nsv549513,nsv549517,nsv549518 M 17421 0 15 KIF26B nsv508704 1 243707778 243753970 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619002 M 4 0 1 KIF26B NA10860 nsv468783 1 243709308 243714349 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543867 M 1557 0 1 KIF26B HGDP00066 nsv549519 1 243709308 243714349 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174086 M 17421 0 1 KIF26B HGDP00066 nsv517138 1 243724288 243730142 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv662006,nssv664966,nssv662183,nssv674467,nssv689324,nssv658925,nssv682476,nssv678839,nssv672207,nssv690785,nssv660923,nssv676070,nssv653847,nssv656271,nssv673016,nssv688901 M 2026 0 16 KIF26B esv33776 1 243736331 243761706 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv100187 M 51 0 1 KIF26B 22286 nsv522286 1 243762877 243769907 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695068 M 2026 1 0 KIF26B esv2374353 1 243786051 243786473 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4533592 M 1 0 1 KIF26B NA18507 nsv474177 1 243798007 243798007 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015108 M 9 1 0 KIF26B NA18507 nsv5221 1 243813833 243832365 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3846 M 9 1 0 KIF26B NA12878 esv2636493 1 243829829 243830828 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5368292 M 1 1 0 KIF26B NA18507 esv1751553 1 243830063 243830063 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3847375 M 2 1 0 KIF26B HuRef esv2275975 1 243844606 243845168 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4884288 M 1 0 1 KIF26B NA18507 esv4958 1 243844759 243845018 CNV loss Wang_et_al_2008 18987735 Sequencing essv27399 M 1 0 1 KIF26B YH esv994414 1 243844808 243844909 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584973 M 3 0 1 KIF26B HuRef esv1719464 1 243844853 243844921 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3666186 M 2 0 1 KIF26B HuRef nsv472200 1 243849174 243849174 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017559 M 9 1 0 KIF26B NA18555 nsv480549 1 243850681 243850681 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018233 M 9 0 0 KIF26B nsv480417 1 243850763 243850763 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011847 M 9 0 0 KIF26B nsv479117 1 243853316 243853316 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012430 M 9 0 0 KIF26B nsv480246 1 243855465 243855465 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015943 M 9 0 0 KIF26B nsv509735 1 243873253 243897529 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618001 M 4 1 0 KIF26B CHM nsv521141 1 243889522 243929845 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697811 M 2026 0 1 KIF26B esv3430624 1 243890022 243890170 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740952 M 185 1 0 KIF26B NA19240 esv3337403 1 243890222 243890264 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740954 M 185 1 0 KIF26B NA19240 esv1786816 1 243890225 243890225 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3785232 M 2 1 0 KIF26B HuRef esv1010286 1 243890225 243892212 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565608 M 3 1 0 KIF26B HuRef nsv5232 1 243893607 243899266 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2808 M 9 1 0 KIF26B NA18555 nsv472353 1 243906437 243906437 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020164 M 9 1 0 KIF26B NA18555 nsv517510 1 243913657 243929845 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv652233,nssv684518,nssv657633,nssv664544,nssv687628,nssv675427,nssv654490,nssv672652 M 2026 0 8 KIF26B nsv827698 1 243914377 243920330 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1432648 M 31 1 0 KIF26B NA18972 esv2112759 1 243925524 243925998 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4763965 M 1 0 1 KIF26B NA18507 esv999717 1 243925679 243925812 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572141 M 3 0 1 KIF26B HuRef esv1770455 1 243925744 243925878 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3879505 M 2 0 1 KIF26B HuRef nsv475886 1 243925795 243925795 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014981 M 9 1 0 KIF26B NA12878 nsv479136 1 243926816 243926816 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017821 M 9 0 0 KIF26B nsv477195 1 243929386 243929386 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016573 M 9 1 0 KIF26B NA18517 nsv998007 1 243951382 244055985 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705564 M 29084 0 1 SMYD3 nsv549520 1 243980907 244066461 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739514 M 17421 1 0 SMYD3 esv3891326 1 243989303 244218798 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25787870 M 3017 1 0 SMYD3 nsv508069 1 243995960 244001960 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621493 M 4 0 0 SMYD3 NA15510 nsv160896 1 244004600 244004667 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179474 M 24 SMYD3 nsv1004993 1 244006957 244026999 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705565,nssv3705566,nssv3493289 M 29084 0 3 SMYD3 nsv468805 1 244017265 244295868 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543886 M 1557 0 1 SMYD3 HGDP00537 nsv549521 1 244017265 244295868 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174087 M 17421 0 1 SMYD3 HGDP00537 esv2472512 1 244027896 244028847 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5325763 M 1 1 0 SMYD3 NA18507 esv3382106 1 244027992 244028459 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652073 M 185 1 0 SMYD3 NA19240 nsv526429 1 244037173 244045980 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702731 M 2026 0 1 SMYD3 esv2762233 1 244043543 244044619 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007032 M 1109 0 1 SMYD3 RW_0251 nsv468816 1 244045980 244072421 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543893 M 1557 0 1 SMYD3 1780862393_A nsv549522 1 244045980 244072421 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174088 M 17421 0 1 SMYD3 1780862393_A esv3891337 1 244053484 244157441 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780541 M 3017 0 1 SMYD3 esv3371948 1 244055931 244055944 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8903913,essv8903926,essv8903928,essv8903930,essv8903894,essv8903965,essv8903900,essv8903885,essv8903918,essv8903976,essv8903884,essv8903886,essv8903946,essv8903870,essv8903961,essv8903896,essv8903973,essv8903950,essv8903929,essv8903912,essv8903921,essv8903943,essv8903968,essv8903944,essv8903977,essv8903966,essv8903890,essv8903920,essv8903949,essv8903967,essv8903940,essv8903939,essv8903889,essv8903956,essv8903932,essv8903978,essv8903927,essv8903962,essv8903873,essv8903938,essv8903923,essv8903907,essv8903919,essv8903937,essv8903951,essv8903872,essv8903905,essv8903877,essv8903963,essv8903910,essv8903933,essv8903960,essv8903931,essv8903953,essv8903876,essv8903904,essv8903941,essv8903888,essv8903952,essv8903875,essv8903948,essv8903945,essv8903915,essv8903916,essv8903906,essv8903874,essv8903975,essv8903922,essv8903974,essv8903934,essv8903899,essv8903878,essv8903911,essv8903964,essv8903871,essv8903959,essv8903898,essv8903971,essv8903895,essv8903882,essv8903942,essv8903879,essv8903887,essv8903901,essv8903893,essv8903883,essv8903972,essv8903955,essv8903924,essv8903908,essv8903917,essv8903897,essv8903909,essv8903881,essv8903970,essv8903935,essv8903954,essv8903902,essv8903957 M 185 99 0 SMYD3 NA06986,NA07000,NA07037,NA07051,NA07346,NA07347,NA07357,NA10847,NA10851,NA11831,NA11881,NA11894,NA11918,NA11919,NA11920,NA11931,NA11992,NA11993,NA11995,NA12003,NA12004,NA12006,NA12043,NA12044,NA12045,NA12144,NA12154,NA12155,NA12249,NA12716,NA12717,NA12749,NA12751,NA12761,NA12763,NA12776,NA12828,NA18486,NA18489,NA18498,NA18501,NA18502,NA18504,NA18505,NA18508,NA18510,NA18517,NA18522,NA18523,NA18526,NA18537,NA18542,NA18545,NA18550,NA18552,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18571,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18603,NA18605,NA18608,NA18609,NA18638,NA18861,NA18870,NA18871,NA18909,NA18912,NA18916,NA18940,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18961,NA18965,NA18973,NA19005,NA19093,NA19138,NA19147,NA19190,NA19225,NA19257 esv1341719 1 244055935 244055935 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4047955 M 2 1 0 SMYD3 HuRef esv3413890 1 244055938 244055950 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673996,essv8673993,essv8673997,essv8673999,essv8673994,essv8673995 M 185 6 0 SMYD3 NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv2759011 1 244095202 244182625 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756893 M 270 0 2 SMYD3 NA18550,NA18632 nsv441746 1 244095685 244103915 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656927,nssv1656928 M 270 0 2 SMYD3 NA18550,NA18632 esv2569869 1 244101513 244102867 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5389746 M 1 0 1 SMYD3 NA18507 esv2193501 1 244102149 244102615 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4729188 M 1 0 1 SMYD3 NA18507 nsv160904 1 244102347 244102431 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179482 M 24 SMYD3 nsv1014150 1 244105594 244274718 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497372 M 29084 1 0 SMYD3 nsv1002445 1 244178950 244196275 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501464 M 29084 0 1 SMYD3 nsv506990 1 244179163 244185163 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623299 M 4 0 0 SMYD3 NA18994 nsv1001139 1 244187139 244615565 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484321 M 29084 0 1 SMYD3 nsv549523 1 244187679 244212760 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739515 M 17421 0 1 SMYD3 esv4687 1 244192540 244192839 CNV loss Wang_et_al_2008 18987735 Sequencing essv27128 M 1 0 1 SMYD3 YH nsv549524 1 244194400 244458300 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174089 M 17421 0 1 SMYD3 HGDP01007 nsv5243 1 244196019 244211201 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8269 M 9 0 1 SMYD3 NA12156 esv1006575 1 244204210 244207720 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586488 M 3 0 1 SMYD3 HuRef nsv820737 1 244204375 244207016 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421091 M 1 0 1 SMYD3 NA10851 esv23200 1 244204440 244207016 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11357 M 40 1 16 SMYD3 NA06985,NA07037,NA11894,NA11931,NA12006,NA12156,NA12287,NA12414,NA12489,NA12749,NA12776,NA18517,NA19099,NA19147,NA19190,NA19240,NA19257 esv1406170 1 244204816 244205368 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3693047 M 2 0 1 SMYD3 HuRef nsv514921 1 244204848 244206736 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2856873,nssv2856842,nssv2856862,nssv2856843,nssv2856520,nssv2856844,nssv2856856,nssv2856845,nssv2856866,nssv2856846,nssv2856877,nssv2856702,nssv2856848,nssv2856223,nssv2856854,nssv2856119,nssv2856858,nssv2856187,nssv2856852,nssv2856617,nssv2856875,nssv2856726,nssv2856879,nssv2856752,nssv2856855,nssv2856069,nssv2856878,nssv2856661,nssv2856859,nssv2856669,nssv2856857,nssv2856196,nssv2856865,nssv2856719,nssv2856515,nssv2856801,nssv2856872,nssv2856783,nssv2856874,nssv2856120,nssv2856869,nssv2856621,nssv2856876,nssv2856201,nssv2856511,nssv2856626,nssv2856851,nssv2856662,nssv2856870,nssv2856102,nssv2856864,nssv2856222,nssv2856521,nssv2856642,nssv2856522,nssv2856676,nssv2856512,nssv2856096,nssv2856514,nssv2856741,nssv2856861,nssv2856162,nssv2856519,nssv2856101,nssv2856517,nssv2856806,nssv2856513,nssv2856628,nssv2856853,nssv2856062,nssv2856849,nssv2856619,nssv2856868,nssv2856218,nssv2856867,nssv2856747,nssv2856871,nssv2856797,nssv2856516,nssv2856081,nssv2856863,nssv2856228,nssv2856850,nssv2856074,nssv2856860,nssv2856141,nssv2856518,nssv2856775,nssv2856076,nssv2856138,nssv2856685,nssv2856817,nssv2856773,nssv2856613,nssv2856090,nssv2856654,nssv2856235,nssv2856173,nssv2856715,nssv2856191,nssv2856079,nssv2856230,nssv2856146,nssv2856125,nssv2856227,nssv2856780,nssv2856089,nssv2856728,nssv2856631,nssv2856660,nssv2856819,nssv2856147,nssv2856110,nssv2856105,nssv2856091,nssv2856770,nssv2856689,nssv2856645,nssv2856800,nssv2856643,nssv2856158,nssv2856051,nssv2856065,nssv2856167,nssv2856038,nssv2856207,nssv2856746,nssv2856615,nssv2856057,nssv2856696,nssv2856830,nssv2856137,nssv2856219,nssv2856649,nssv2856059,nssv2856831,nssv2856790,nssv2856648,nssv2856727,nssv2856818,nssv2856834,nssv2856678,nssv2856764,nssv2856739,nssv2856233,nssv2856815,nssv2856226,nssv2856795,nssv2856241,nssv2856121,nssv2856656,nssv2856771,nssv2856171,nssv2856673,nssv2856142,nssv2856751,nssv2856836,nssv2856766,nssv2856835,nssv2856210,nssv2856757,nssv2856732,nssv2856709,nssv2856658,nssv2856699,nssv2856123,nssv2856692,nssv2856164,nssv2856668,nssv2856066,nssv2856133,nssv2856047,nssv2856736,nssv2856738,nssv2856635,nssv2856232,nssv2856786,nssv2856682,nssv2856824,nssv2856148,nssv2856107,nssv2856789,nssv2856695,nssv2856755,nssv2856132,nssv2856723,nssv2856686,nssv2856784,nssv2856791,nssv2856737,nssv2856140,nssv2856687,nssv2856765,nssv2856657,nssv2856220,nssv2856136,nssv2856811,nssv2856077,nssv2856753,nssv2856206,nssv2856697,nssv2856084,nssv2856159,nssv2856804,nssv2856109,nssv2856827,nssv2856045,nssv2856704,nssv2856664,nssv2856145,nssv2856092,nssv2856115,nssv2856721,nssv2856154,nssv2856734,nssv2856691,nssv2856847,nssv2856829,nssv2856243,nssv2856152,nssv2856180,nssv2856759,nssv2856627,nssv2856203,nssv2856816,nssv2856209,nssv2856200,nssv2856186,nssv2856760,nssv2856671,nssv2856652,nssv2856135,nssv2856072,nssv2856124,nssv2856100,nssv2856049,nssv2856646,nssv2856240,nssv2856046,nssv2856675,nssv2856712,nssv2856106,nssv2856178,nssv2856828,nssv2856082,nssv2856036,nssv2856758,nssv2856050,nssv2856733,nssv2856713,nssv2856099,nssv2856217,nssv2856184,nssv2856192,nssv2856213,nssv2856170,nssv2856748,nssv2856670,nssv2856650,nssv2856156,nssv2856239,nssv2856653,nssv2856117,nssv2856821,nssv2856048,nssv2856640,nssv2856745,nssv2856633,nssv2856711,nssv2856833,nssv2856242,nssv2856743,nssv2856672,nssv2856665,nssv2856793,nssv2856666,nssv2856822,nssv2856754,nssv2856181,nssv2856659,nssv2856095,nssv2856185,nssv2856632,nssv2856176,nssv2856725,nssv2856620,nssv2856798,nssv2856706,nssv2856624,nssv2856163,nssv2856225,nssv2856054,nssv2856177,nssv2856637,nssv2856205,nssv2856769,nssv2856053,nssv2856694,nssv2856667,nssv2856198,nssv2856153,nssv2856700,nssv2856070,nssv2856708,nssv2856212,nssv2856618,nssv2856796,nssv2856189,nssv2856778,nssv2856188,nssv2856782,nssv2856224,nssv2856841,nssv2856075,nssv2856722,nssv2856042,nssv2856236,nssv2856143,nssv2856044,nssv2856683,nssv2856055,nssv2856127,nssv2856122,nssv2856169,nssv2856086,nssv2856777,nssv2856118,nssv2856730,nssv2856056,nssv2856111,nssv2856742,nssv2856838,nssv2856622,nssv2856840,nssv2856707,nssv2856040,nssv2856803,nssv2856693,nssv2856165,nssv2856630,nssv2856832,nssv2856151,nssv2856809,nssv2856112,nssv2856677,nssv2856781,nssv2856710,nssv2856157,nssv2856714,nssv2856647,nssv2856837,nssv2856083,nssv2856774,nssv2856149,nssv2856763,nssv2856724,nssv2856150,nssv2856131,nssv2856094,nssv2856688,nssv2856749,nssv2856684,nssv2856698,nssv2856717,nssv2856767,nssv2856068,nssv2856113,nssv2856035,nssv2856174,nssv2856234,nssv2856130,nssv2856776,nssv2856238,nssv2856614,nssv2856139,nssv2856041,nssv2856663,nssv2856787,nssv2856718,nssv2856810,nssv2856067,nssv2856237,nssv2856716,nssv2856060,nssv2856166,nssv2856788,nssv2856195,nssv2856814,nssv2856703,nssv2856779,nssv2856087,nssv2856073,nssv2856651,nssv2856679,nssv2856826,nssv2856636,nssv2856128,nssv2856820,nssv2856808,nssv2856812,nssv2856179,nssv2856043,nssv2856740,nssv2856063,nssv2856807,nssv2856701,nssv2856116,nssv2856108,nssv2856655,nssv2856644,nssv2856088,nssv2856625,nssv2856160,nssv2856214,nssv2856144,nssv2856762,nssv2856080,nssv2856182,nssv2856037,nssv2856761,nssv2856681,nssv2856193,nssv2856194,nssv2856085,nssv2856161,nssv2856097,nssv2856638,nssv2856802,nssv2856221,nssv2856634,nssv2856052,nssv2856823,nssv2856735,nssv2856093,nssv2856794,nssv2856785,nssv2856729,nssv2856134,nssv2856104,nssv2856720,nssv2856061,nssv2856705,nssv2856680,nssv2856805,nssv2856231,nssv2856756,nssv2856623,nssv2856772,nssv2856216,nssv2856639,nssv2856768,nssv2856799,nssv2856098,nssv2856168,nssv2856071,nssv2856690,nssv2856674,nssv2856731,nssv2856190,nssv2856155,nssv2856172,nssv2856825,nssv2856078,nssv2856229,nssv2856197,nssv2856114,nssv2856792,nssv2856064,nssv2856175,nssv2856813,nssv2856039,nssv2856126,nssv2856208,nssv2856204,nssv2856629,nssv2856129,nssv2856103,nssv2856744,nssv2856199,nssv2856183,nssv2856839,nssv2856641,nssv2856616,nssv2856211,nssv2856215,nssv2856058,nssv2856202,nssv2856750 M 2366 488 0 SMYD3 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 esv1098694 1 244205412 244205868 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3783281 M 2 0 1 SMYD3 HuRef nsv549525 1 244205518 244206928 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739516 M 17421 0 1 SMYD3 esv1372253 1 244205918 244206758 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3645005 M 2 0 1 SMYD3 HuRef nsv549526 1 244208873 244360339 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739517 M 17421 0 1 SMYD3 esv2562033 1 244221621 244223252 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5374564 M 1 0 1 SMYD3 NA18507 esv29332 1 244221727 244222861 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18775 M 40 0 1 SMYD3 NA07045 esv1739621 1 244222266 244222266 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3588807 M 2 1 0 SMYD3 HuRef esv6772 1 244222333 244222991 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29213 M 1 0 0 SMYD3 esv2155069 1 244222368 244222994 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv5000306 M 1 0 1 SMYD3 NA18507 esv1407105 1 244222407 244222736 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3830408 M 2 0 1 SMYD3 HuRef esv1003540 1 244222454 244222782 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575145 M 3 0 1 SMYD3 HuRef esv2332007 1 244223330 244223719 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4647447 M 1 0 1 SMYD3 NA18507 esv2499203 1 244231939 244233371 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5275153 M 1 0 1 SMYD3 NA18507 esv1003030 1 244233906 244234002 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565853 M 3 0 1 SMYD3 HuRef esv1389764 1 244233906 244234003 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3892909 M 2 0 1 SMYD3 HuRef nsv526469 1 244234640 244557061 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702773 M 2026 1 0 SMYD3 esv2473608 1 244239271 244240249 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5374064 M 1 1 0 SMYD3 NA18507 esv1341852 1 244239907 244239907 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4220110 M 2 1 0 SMYD3 HuRef nsv1005825 1 244240831 244755258 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501775 M 29084 1 0 LOC255654,SMYD3 esv3891348 1 244247693 244550406 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787575,essv25785994,essv25779413 M 3017 0 3 SMYD3 nsv1007071 1 244252603 244316262 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491563 M 29084 1 0 SMYD3 esv3402934 1 244255277 244255277 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740955 M 185 1 0 SMYD3 NA19240 nsv1008113 1 244265482 244438079 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705567 M 29084 0 1 SMYD3 esv3891359 1 244265938 244336569 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25787626 M 3017 0 1 SMYD3 nsv477422 1 244267356 244267356 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019255 M 9 1 0 SMYD3 NA18517 esv2605359 1 244286076 244287107 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5253839 M 1 1 0 SMYD3 NA18507 esv3451849 1 244291481 244291494 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863852 M 185 1 0 SMYD3 NA12005 nsv549527 1 244293189 244380346 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739518 M 17421 0 1 SMYD3 esv24517 1 244301690 244302524 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv18228 M 40 2 6 SMYD3 NA11931,NA12004,NA12239,NA12287,NA12489,NA12749,NA15510,NA19114 esv2434687 1 244301701 244302725 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5253206 M 1 1 0 SMYD3 NA18507 esv1782018 1 244301923 244301923 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3782003 M 2 1 0 SMYD3 HuRef esv1371383 1 244301991 244301991 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3594104 M 2 1 0 SMYD3 HuRef nsv1013805 1 244314743 244341514 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705568 M 29084 1 0 SMYD3 nsv997542 1 244332213 244623249 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484185 M 29084 1 0 SMYD3 esv33357 1 244341945 244342696 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98717 M 51 0 1 SMYD3 21606 nsv159602 1 244353545 244355012 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178180 M 24 SMYD3 nsv1006362 1 244366971 244421281 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705569 M 29084 0 1 SMYD3 nsv549528 1 244369751 244775090 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739519 M 17421 1 0 LOC255654,SMYD3,TFB2M nsv515510 1 244386105 244452757 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv676404,nssv660679,nssv685363,nssv686479,nssv683795,nssv677318,nssv657929,nssv660764,nssv679462,nssv685549,nssv653382,nssv665033 M 2026 0 12 SMYD3 esv3452015 1 244402052 244402850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692207 M 185 1 0 SMYD3 NA19238 dgv603n100 1 244406270 244662605 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001496,nsv1010307 M 29084 0 2 SMYD3 esv2607117 1 244429574 244430744 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5370865 M 1 1 0 SMYD3 NA18507 esv1623049 1 244430066 244430066 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4220680 M 2 1 0 SMYD3 HuRef nsv947476 1 244435927 244455708 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2758650 M 97 0 1 SMYD3 HGDP01284 esv2764205 1 244436222 244451537 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007034,essv7007035,essv7007036 M 1109 0 3 SMYD3 RW_0030,RW_0180,RW_0512 nsv1006481 1 244438079 244495681 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486984 M 29084 0 1 SMYD3 dgv114n67 1 244460196 244467573 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827720,nsv827709 M 31 0 3 SMYD3 AK18,NA18564,NA18570 nsv827731 1 244460232 244460967 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437278 M 31 0 1 SMYD3 NA18949 nsv9014 1 244461590 244467021 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv25463,nssv25708 M 31 0 2 SMYD3 NA18504,NA19132 esv25241 1 244462085 244465004 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12346 M 40 1 5 SMYD3 NA12828,NA18502,NA18517,NA18858,NA18907,NA19114 esv1565797 1 244462610 244462708 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3689078 M 2 0 1 SMYD3 HuRef esv3351598 1 244462752 244464250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692209 M 185 1 0 SMYD3 NA19238 esv1763627 1 244462964 244463111 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4144833 M 2 0 1 SMYD3 HuRef nsv549529 1 244463054 244463964 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739520 M 17421 0 1 SMYD3 esv1037683 1 244463514 244463514 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4000120 M 2 1 0 SMYD3 HuRef nsv549530 1 244464211 244481685 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739521 M 17421 0 1 SMYD3 esv3446524 1 244464540 244465520 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8699418 M 185 1 0 SMYD3 NA12878 esv3308763 1 244473324 244473325 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841421,essv7843293,essv7840314,essv7840473 M 185 4 0 SMYD3 NA12878,NA12891,NA12892,NA19239 nsv549531 1 244473385 244747739 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739522 M 17421 1 0 LOC255654,SMYD3 esv2759012 1 244473769 244807567 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757779 M 270 3 0 CNST,LOC255654,SMYD3,TFB2M NA18500,NA19144,NA19171 nsv428346 1 244473769 244807567 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv453197 M 62 1 0 CNST,LOC255654,SMYD3,TFB2M HGDP00986 nsv9025 1 244480701 244490938 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv27271 M 31 1 0 SMYD3 NA10839 esv1008315 1 244481074 244482135 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586548 M 3 0 1 SMYD3 HuRef esv22703 1 244481074 244482220 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13578 M 40 11 1 SMYD3 NA11894,NA12156,NA12776,NA12878,NA18502,NA18505,NA18508,NA18517,NA18523,NA18907,NA19129,NA19190 nsv820560 1 244481074 244482281 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421102 M 1 0 1 SMYD3 NA10851 nsv549532 1 244481219 244481742 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739523 M 17421 0 1 SMYD3 nsv549533 1 244481423 244487270 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739524 M 17421 0 1 SMYD3 nsv549534 1 244481685 244492485 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739525 M 17421 0 1 SMYD3 esv1396451 1 244481706 244481799 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3893225 M 2 0 1 SMYD3 HuRef esv1098199 1 244481846 244482001 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3704215 M 2 0 1 SMYD3 HuRef esv2762234 1 244495464 244592242 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007037 M 1109 0 1 SMYD3 RW_0096 nsv511750 1 244505000 244507595 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626396 M 1 0 1 SMYD3 1 esv1309596 1 244505811 244506305 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4140824 M 2 0 1 SMYD3 HuRef esv1404916 1 244506340 244506588 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4271834 M 2 0 1 SMYD3 HuRef esv3379677 1 244538269 244538298 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740956 M 185 1 0 SMYD3 NA19240 esv2516817 1 244554753 244555440 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5232908 M 1 1 0 SMYD3 NA18507 esv1589863 1 244554972 244554972 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3676048 M 2 1 0 SMYD3 HuRef esv3434322 1 244555190 244555320 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808956 M 185 1 0 SMYD3 NA12878 nsv1003441 1 244558459 244604390 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486205 M 29084 1 0 SMYD3 esv1003896 1 244561987 244563416 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565095 M 3 1 0 SMYD3 HuRef esv2762191 1 244613059 244881687 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006378 M 1109 1 0 CNST,LOC255654,SMYD3,TFB2M SW_1163 esv29109 1 244617632 244619964 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12420 M 40 0 1 SMYD3 NA07037 esv3408373 1 244618052 244619850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692210 M 185 1 0 SMYD3 NA19239 esv1643982 1 244619366 244619679 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4182799 M 2 0 1 SMYD3 HuRef esv2590335 1 244624895 244626277 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5202904 M 1 0 1 SMYD3 NA18507 esv2074719 1 244625409 244625888 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4761589 M 1 0 1 SMYD3 NA18507 esv1644154 1 244625545 244625601 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3663152 M 2 0 1 SMYD3 HuRef esv990691 1 244625595 244625648 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574089 M 3 0 1 SMYD3 HuRef nsv998644 1 244628703 244703223 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705572 M 29084 0 1 SMYD3 nsv524498 1 244643284 244685503 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700438 M 2026 0 1 SMYD3 esv2521573 1 244658415 244659276 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5191341 M 1 1 0 SMYD3 NA18507 nsv1003962 1 244658857 244690953 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705573 M 29084 0 1 SMYD3 esv3327246 1 244658944 244658963 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9599236,essv9599258,essv9599269,essv9599280,essv9599247 M 185 5 0 SMYD3 NA11894,NA12045,NA12812,NA12814,NA12873 esv1640065 1 244658965 244658965 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4142574 M 2 1 0 SMYD3 HuRef nsv478282 1 244679996 244679996 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016066 M 9 1 0 SMYD3 NA18507 esv1477661 1 244692102 244692164 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4146779 M 2 0 1 SMYD3 HuRef esv1000792 1 244692166 244692227 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578311 M 3 0 1 SMYD3 HuRef nsv1010453 1 244712420 244881675 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490157 M 29084 1 0 CNST,LOC255654,SMYD3,TFB2M esv2100000 1 244713769 244715258 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4649952 M 1 0 1 SMYD3 NA18507 esv2390771 1 244713833 244714308 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4960124 M 1 0 1 SMYD3 NA18507 esv27324 1 244714189 244715255 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13157 M 40 0 1 SMYD3 NA18909 esv1544511 1 244714191 244714243 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4299012 M 2 0 1 SMYD3 HuRef esv989400 1 244723725 244723789 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575440 M 3 0 1 SMYD3 HuRef esv1205920 1 244723751 244723816 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4085843 M 2 0 1 SMYD3 HuRef nsv522303 1 244735167 244759615 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695084 M 2026 0 1 LOC255654,SMYD3 nsv525447 1 244735167 244765276 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701575 M 2026 1 0 LOC255654,SMYD3 nsv945428 1 244746669 244758404 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827326,nssv1827292,nssv1827276,nssv1827280,nssv1827254,nssv1827291,nssv1827331,nssv1828261,nssv1827257,nssv1827283,nssv1827269,nssv1827301,nssv1827248,nssv1827313,nssv1827259,nssv1828266,nssv1827325,nssv1828262,nssv1827324,nssv1827309,nssv1827262,nssv1828258,nssv1827329,nssv1827302,nssv1827258,nssv1827277,nssv1827249,nssv1827286,nssv1827251,nssv1828264,nssv1827278,nssv1827288,nssv1827261,nssv1827318,nssv1827250,nssv1827297,nssv1827252,nssv1827270,nssv1827260,nssv1827287,nssv1827267,nssv1827304,nssv1827330,nssv1827314,nssv1827266,nssv1827319,nssv1827275,nssv1827323,nssv1827271,nssv1827321,nssv1827328,nssv1827320,nssv1828256,nssv1827293,nssv1827263,nssv1827307,nssv1827256,nssv1827312,nssv1827327,nssv1827273,nssv1827253,nssv1828267,nssv1827255,nssv1827315,nssv1827265,nssv1827274,nssv1827268,nssv1827305,nssv1827264,nssv1827281,nssv1828257,nssv1827316,nssv1827311,nssv1827298,nssv1827303,nssv1827295,nssv1827290,nssv1827279,nssv1827294,nssv1827284,nssv1827310,nssv1827296,nssv1827289,nssv1827285,nssv1827272,nssv1827317,nssv1827299,nssv1827300,nssv1827322,nssv1828259,nssv1827282,nssv1828265,nssv1827306,nssv1828263,nssv1828260,nssv1827247,nssv1827308 M 97 10 0 LOC255654 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv549535 1 244747739 244775090 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739526 M 17421 0 1 LOC255654,TFB2M nsv9036 1 244749012 244752951 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv25716,nssv26388,nssv25942,nssv23692,nssv25953,nssv27391,nssv23685,nssv22749,nssv24290,nssv25722,nssv27831,nssv27528,nssv23372,nssv22100,nssv25443 M 31 0 15 LOC255654 NA07029,NA10839,NA10863,NA11830,NA12740,NA12872,NA18504,NA18517,NA18552,NA18563,NA18572,NA18853,NA18860,NA19132,NA19173 esv26011 1 244749795 244752090 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13262 M 40 0 24 LOC255654 NA06985,NA07037,NA11993,NA12004,NA12006,NA12287,NA12414,NA12749,NA12878,NA15510,NA18505,NA18511,NA18517,NA18858,NA18861,NA18907,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19257 dgv886n54 1 244749951 244751930 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549540,nsv549539,nsv549536 M 17421 0 17 LOC255654 nsv549537 1 244749951 244752734 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739538,nssv739539 M 17421 0 2 LOC255654 dgv887n54 1 244749951 244754209 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549544,nsv549538 M 17421 0 2 LOC255654 esv1568202 1 244750551 244751433 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3794644 M 2 0 1 LOC255654 HuRef nsv549541 1 244750615 244751930 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739547 M 17421 0 1 LOC255654 nsv549542 1 244750720 244750973 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739552,nssv739551,nssv739550,nssv739549,nssv739548 M 17421 0 5 LOC255654 nsv549543 1 244750831 244752734 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739553 M 17421 0 1 LOC255654 esv1237155 1 244751469 244751523 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3657243 M 2 0 1 LOC255654 HuRef esv1722014 1 244751756 244751756 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4345624 M 2 1 0 LOC255654 HuRef esv3891370 1 244763219 244775090 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785559 M 3017 0 1 TFB2M dgv33n21 1 244763219 244814209 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv522963,nsv527464 M 2026 2 0 CNST,TFB2M nsv528615 1 244775090 244909938 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705243 M 2026 1 0 CNST,TFB2M nsv5254 1 244779983 244814545 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv618 M 9 1 0 CNST,TFB2M NA19240 esv2499098 1 244805652 244806315 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5225036 M 1 1 0 CNST NA18507 nsv9047 1 244805838 244809161 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv26178 M 31 0 1 CNST NA18504 esv1262343 1 244806178 244806178 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4143028 M 2 1 0 CNST HuRef esv26600 1 244806227 244808300 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20088 M 40 0 2 CNST NA18505,NA18861 nsv945430 1 244834457 244838385 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828299,nssv1828317,nssv1828269,nssv1828303,nssv1828277,nssv1828316,nssv1828346,nssv1828362,nssv1828275,nssv1828313,nssv1828345,nssv1828361,nssv1828352,nssv1828356,nssv1828270,nssv1828326,nssv1828287,nssv1828291,nssv1828282,nssv1828335,nssv1828348,nssv1828331,nssv1828350,nssv1828268,nssv1828280,nssv1828357,nssv1828297,nssv1828304,nssv1828347,nssv1828359,nssv1828290,nssv1828330,nssv1828349,nssv1828321,nssv1828353,nssv1828298,nssv1828279,nssv1828323,nssv1828289,nssv1828355,nssv1828292,nssv1828311,nssv1828273,nssv1828327,nssv1828351,nssv1828293,nssv1828283,nssv1828315,nssv1828284,nssv1828340,nssv1828272,nssv1828363,nssv1828276,nssv1828339,nssv1828281,nssv1828343,nssv1828278,nssv1828308,nssv1828271,nssv1828329,nssv1828288,nssv1828358,nssv1828274,nssv1828334,nssv1828354,nssv1828360,nssv1828285,nssv1828341,nssv1828286,nssv1828309,nssv1828296,nssv1828344,nssv1828364,nssv1828322,nssv1828319,nssv1828310,nssv1828312,nssv1828306,nssv1828314,nssv1828325,nssv1828295,nssv1828294,nssv1828301,nssv1828320,nssv1828300,nssv1828342,nssv1828336,nssv1828332,nssv1828338,nssv1828337,nssv1828328,nssv1828333,nssv1828305,nssv1828324,nssv1828307,nssv1828302,nssv1828318 M 97 10 0 CNST HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509746 1 244840348 244874399 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619832 M 4 1 0 CNST NA10860 esv3381478 1 244843490 244844728 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652076 M 185 1 0 CNST NA19240 nsv945431 1 244864240 244866854 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828366,nssv1828425,nssv1828442,nssv1828452,nssv1828376,nssv1828413,nssv1828450,nssv1828431,nssv1828443,nssv1828409,nssv1828372,nssv1828410,nssv1828449,nssv1828399,nssv1828394,nssv1828428,nssv1828396,nssv1828388,nssv1828367,nssv1828440,nssv1828379,nssv1828427,nssv1828385,nssv1828395,nssv1828445,nssv1828455,nssv1828384,nssv1828407,nssv1828444,nssv1828414,nssv1828447,nssv1828423,nssv1828374,nssv1828404,nssv1828387,nssv1828459,nssv1828375,nssv1828402,nssv1828446,nssv1828458,nssv1828377,nssv1828454,nssv1828371,nssv1828432,nssv1828389,nssv1828456,nssv1828381,nssv1828437,nssv1828448,nssv1828433,nssv1828370,nssv1828453,nssv1828378,nssv1828401,nssv1828369,nssv1828430,nssv1828380,nssv1828418,nssv1828373,nssv1828365,nssv1828368,nssv1828420,nssv1828451,nssv1828436,nssv1828383,nssv1828438,nssv1828386,nssv1828408,nssv1828382,nssv1828426,nssv1828393,nssv1828460,nssv1828405,nssv1828424,nssv1828441,nssv1828390,nssv1828406,nssv1828397,nssv1828391,nssv1828412,nssv1828411,nssv1828417,nssv1828400,nssv1828422,nssv1828457,nssv1828461,nssv1828429,nssv1828439,nssv1828392,nssv1828434,nssv1828421,nssv1828403,nssv1828435,nssv1828398,nssv1828416,nssv1828415,nssv1828419 M 97 10 0 CNST HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2621871 1 244872575 244873066 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5342900 M 1 1 0 CNST NA18507 esv1713139 1 244882778 244882778 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3635891 M 2 1 0 CNST HuRef esv2762192 1 244890480 245135855 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7006389 M 1109 1 0 AHCTF1,CNST,LOC149134,SCCPDH SW_0198 nsv509757 1 244892888 244933850 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619833,nssv623819,nssv621116 M 4 3 0 CNST NA10860,NA15510,NA18994 esv1007065 1 244922100 244922704 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565035 M 3 1 0 "" HuRef esv1297758 1 244940367 244940367 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3770512 M 2 1 0 "" HuRef nsv159075 1 244944413 244944645 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177653 M 24 "" nsv1006262 1 244959449 245031398 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486754 M 29084 1 0 LOC149134,SCCPDH nsv523531 1 244960571 245034522 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699306 M 2026 1 0 LOC149134,SCCPDH esv2443936 1 244994261 244995695 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5278609 M 1 0 1 SCCPDH NA18507 esv1933268 1 244994739 244995228 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4829301 M 1 0 1 SCCPDH NA18507 esv1000885 1 244994925 244995012 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3567676 M 3 0 1 SCCPDH HuRef esv1589537 1 244995047 244995179 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4115334 M 2 0 1 SCCPDH HuRef nsv160725 1 244995048 244995179 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179303 M 24 SCCPDH nsv549545 1 245002976 245029642 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739555 M 17421 0 1 LOC149134 nsv509768 1 245004336 245069331 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619834,nssv618002,nssv623820,nssv621117 M 4 4 0 AHCTF1,LOC149134 CHM,NA10860,NA15510,NA18994 esv2759013 1 245006479 245012644 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756894 M 270 0 1 "" NA18966 esv28400 1 245012934 245013534 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15314 M 40 3 0 "" NA18523,NA19114,NA19225 nsv473926 1 245015099 245015099 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018384 M 9 1 0 "" NA12156 esv2609864 1 245015251 245015964 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5235452 M 1 1 0 "" NA18507 nsv473142 1 245017726 245017726 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018237 M 9 1 0 "" NA19129 nsv473832 1 245019346 245019346 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015808 M 9 1 0 "" NA12156 nsv474344 1 245019583 245019583 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017606 M 9 1 0 LOC149134 NA18507 nsv525154 1 245020789 245029642 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701226 M 2026 0 1 LOC149134 nsv5265 1 245030415 245066279 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6231,nssv5084,nssv3847,nssv1816,nssv628 M 9 5 0 "" NA12156,NA12878,NA18555,NA19129,NA19240 esv4346 1 245036440 245036674 CNV loss Wang_et_al_2008 18987735 Sequencing essv26787 M 1 0 1 "" YH esv1230006 1 245036520 245036612 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4079672 M 2 0 1 "" HuRef nsv159925 1 245036521 245036612 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178503 M 24 "" esv2112127 1 245039329 245039774 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4506210 M 1 0 1 "" NA18507 esv993790 1 245044476 245050978 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565670 M 3 1 0 "" HuRef esv1009063 1 245047534 245049741 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564761 M 3 1 0 "" HuRef esv1166400 1 245047909 245047909 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4062477 M 2 1 0 "" HuRef esv1607517 1 245055819 245055882 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3687083 M 2 0 1 "" HuRef nsv945432 1 245069490 245070800 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827342,nssv1827389,nssv1828463,nssv1827358,nssv1827346,nssv1827353,nssv1827335,nssv1827375,nssv1827337,nssv1827372,nssv1827400,nssv1827381,nssv1827405,nssv1827390,nssv1827359,nssv1827394,nssv1827398,nssv1827364,nssv1827343,nssv1828462,nssv1827401,nssv1827354,nssv1827357,nssv1827393,nssv1827406,nssv1827367,nssv1827332,nssv1827396,nssv1827350,nssv1827383,nssv1827333,nssv1827385,nssv1827338,nssv1827361,nssv1827339,nssv1827378,nssv1827404,nssv1827377,nssv1827341,nssv1827386,nssv1827352,nssv1827374,nssv1827347,nssv1827351,nssv1827402,nssv1827395,nssv1827356,nssv1827373,nssv1827344,nssv1827363,nssv1827349,nssv1827362,nssv1827348,nssv1827369,nssv1827336,nssv1827392,nssv1827334,nssv1827384,nssv1827407,nssv1827388,nssv1827403,nssv1827379,nssv1827399,nssv1827360,nssv1827345,nssv1827397,nssv1827340,nssv1827371,nssv1828465,nssv1827376,nssv1828464,nssv1827355,nssv1827368,nssv1827382,nssv1827365,nssv1827380,nssv1827366,nssv1827391,nssv1827370,nssv1827387 M 97 10 0 AHCTF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945433 1 245079330 245081658 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827480,nssv1827474,nssv1827419,nssv1827444,nssv1827420,nssv1827465,nssv1827415,nssv1827453,nssv1827418,nssv1827443,nssv1827437,nssv1827455,nssv1827416,nssv1827469,nssv1827483,nssv1827433,nssv1827422,nssv1827452,nssv1827414,nssv1827461,nssv1827423,nssv1827438,nssv1827439,nssv1827447,nssv1827410,nssv1827462,nssv1827485,nssv1827473,nssv1827481,nssv1827459,nssv1827412,nssv1827476,nssv1827478,nssv1827475,nssv1827417,nssv1827466,nssv1827430,nssv1827408,nssv1827429,nssv1827441,nssv1827486,nssv1827431,nssv1827421,nssv1827434,nssv1827427,nssv1827449,nssv1827436,nssv1827454,nssv1827484,nssv1827477,nssv1827432,nssv1827472,nssv1827482,nssv1827458,nssv1827409,nssv1827468,nssv1827413,nssv1827464,nssv1827424,nssv1827435,nssv1827428,nssv1827448,nssv1827487,nssv1827451,nssv1827411,nssv1827440,nssv1827426,nssv1827470,nssv1827479,nssv1827456,nssv1827425,nssv1827463,nssv1827457,nssv1827446,nssv1827442,nssv1827460,nssv1827445,nssv1827471,nssv1827450,nssv1827467 M 97 10 0 AHCTF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945435 1 245089832 245091232 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827509,nssv1827547,nssv1827495,nssv1827536,nssv1827494,nssv1827532,nssv1827508,nssv1827526,nssv1827565,nssv1827551,nssv1827560,nssv1827535,nssv1827558,nssv1827525,nssv1827502,nssv1827537,nssv1827499,nssv1827530,nssv1827491,nssv1827540,nssv1827498,nssv1827554,nssv1827497,nssv1827541,nssv1827500,nssv1827488,nssv1827519,nssv1827553,nssv1827503,nssv1827549,nssv1827561,nssv1827524,nssv1827492,nssv1827513,nssv1827510,nssv1827523,nssv1827493,nssv1827518,nssv1827512,nssv1827533,nssv1827564,nssv1827545,nssv1827489,nssv1827556,nssv1827501,nssv1827529,nssv1827562,nssv1827542,nssv1827490,nssv1827514,nssv1827507,nssv1827555,nssv1827516,nssv1827521,nssv1827567,nssv1827546,nssv1827566,nssv1827527,nssv1827496,nssv1827511,nssv1827517,nssv1827544,nssv1827504,nssv1827520,nssv1827505,nssv1827552,nssv1827506,nssv1827534,nssv1827563,nssv1827538,nssv1827559,nssv1827539,nssv1827548,nssv1827528,nssv1827515,nssv1827550,nssv1827543,nssv1827531,nssv1827522,nssv1827557 M 97 10 0 AHCTF1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv511751 1 245092971 245096543 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626397 M 1 0 1 AHCTF1 1 esv2446831 1 245093736 245095316 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5227076 M 1 0 1 AHCTF1 NA18507 esv1940734 1 245094329 245095016 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4893228 M 1 0 1 AHCTF1 NA18507 esv2857 1 245094462 245094938 CNV loss Wang_et_al_2008 18987735 Sequencing essv25298 M 1 0 1 AHCTF1 YH nsv5276 1 245094987 245139721 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8288 M 9 0 1 AHCTF1 NA12156 esv33129 1 245141053 246395458 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv97135,essv100528,essv100634,essv94401,essv97853,essv95741,essv95800,essv96741 M 51 3 5 AHCTF1,C1orf229,GCSAML,GCSAML-AS1,MIR3916,NLRP3,OR11L1,OR13G1,OR14A16,OR1C1,OR2AK2,OR2B11,OR2C3,OR2G2,OR2G3,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M5,OR2T8,OR2W3,OR2W5,OR6F1,TRIM58,VN1R5,ZNF124,ZNF496,ZNF669,ZNF670,ZNF670-ZNF695,ZNF695 21656,21808,21837,21841,21911,22011,22075,22298 nsv524007 1 245165210 245229281 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699867 M 2026 1 0 ZNF670-ZNF695,ZNF695 esv1005990 1 245169635 245170598 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579106 M 3 0 1 "" HuRef esv1490388 1 245175165 245175165 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3651320 M 2 1 0 "" HuRef nsv999879 1 245178830 245343541 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484966 M 29084 1 0 C1orf229,ZNF669,ZNF670,ZNF670-ZNF695,ZNF695 esv3891381 1 245191978 245239188 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785167 M 3017 0 1 ZNF670-ZNF695,ZNF695 nsv549546 1 245212313 245271679 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739556 M 17421 0 1 ZNF670,ZNF670-ZNF695,ZNF695 nsv945436 1 245229405 245238351 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827574,nssv1827602,nssv1827579,nssv1827613,nssv1828570,nssv1827631,nssv1827582,nssv1828580,nssv1828576,nssv1827603,nssv1827571,nssv1827617,nssv1827589,nssv1827627,nssv1827580,nssv1828564,nssv1827599,nssv1827620,nssv1828577,nssv1827610,nssv1828569,nssv1827628,nssv1827583,nssv1827605,nssv1827572,nssv1828586,nssv1828572,nssv1827638,nssv1827581,nssv1827606,nssv1827590,nssv1827615,nssv1827570,nssv1828582,nssv1828575,nssv1827612,nssv1827577,nssv1827568,nssv1827592,nssv1828585,nssv1827573,nssv1827621,nssv1828573,nssv1827634,nssv1828574,nssv1827639,nssv1827587,nssv1828581,nssv1827588,nssv1827629,nssv1827575,nssv1827616,nssv1827584,nssv1827593,nssv1827596,nssv1827632,nssv1827576,nssv1827633,nssv1828571,nssv1827598,nssv1827597,nssv1828583,nssv1827569,nssv1828568,nssv1827586,nssv1828587,nssv1827585,nssv1827635,nssv1828578,nssv1828579,nssv1827578,nssv1828567,nssv1827604,nssv1827607,nssv1827594,nssv1827591,nssv1828565,nssv1827630,nssv1827611,nssv1827622,nssv1827614,nssv1827626,nssv1827619,nssv1827595,nssv1827600,nssv1827625,nssv1827601,nssv1827618,nssv1827609,nssv1828584,nssv1828588,nssv1827636,nssv1827608,nssv1828566,nssv1827624,nssv1827637,nssv1827623 M 97 10 0 ZNF670-ZNF695,ZNF695 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2487818 1 245252545 245254312 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5357471 M 1 0 1 ZNF670-ZNF695 NA18507 nsv1014012 1 245274555 245355761 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496219 M 29084 0 1 C1orf229,ZNF124,ZNF669,ZNF670,ZNF670-ZNF695 esv29446 1 245298537 245299486 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16837 M 40 0 1 ZNF670,ZNF670-ZNF695 NA18907 nsv549547 1 245299779 245348392 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739557 M 17421 0 1 C1orf229,ZNF669,ZNF670,ZNF670-ZNF695 esv1167318 1 245321380 245321380 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3884715 M 2 1 0 "" HuRef esv3891392 1 245326194 245349942 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797538 M 3017 0 1 C1orf229,ZNF669 nsv509779 1 245329103 245367240 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619835,nssv621118 M 4 2 0 C1orf229,ZNF124,ZNF669 NA10860,NA15510 esv27005 1 245336951 245341892 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16513 M 40 0 1 C1orf229 NA12489 nsv833126 1 245339707 245542773 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441755 M 95 0 1 C1orf229,MIR3916,VN1R5,ZNF124,ZNF496 nsv549548 1 245341062 245345330 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739559,nssv739558 M 17421 0 2 C1orf229 nsv549549 1 245341838 245359837 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739560 M 17421 0 1 C1orf229,ZNF124 nsv5287 1 245342118 245361744 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8296 M 9 1 0 C1orf229,ZNF124 NA12156 nsv511752 1 245345693 245348880 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626398 M 1 0 1 "" 1 esv24790 1 245345749 245348969 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13765 M 40 1 13 "" NA12156,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18916,NA19108,NA19114,NA19129,NA19147,NA19190,NA19240 esv995255 1 245345804 245348904 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586273 M 3 1 0 "" HuRef dgv888n54 1 245345835 245348473 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549550,nsv549559,nsv549558,nsv549557 M 17421 0 5 "" dgv889n54 1 245345835 245348856 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549568,nsv549555,nsv549554,nsv549551,nsv549560 M 17421 6 0 "" dgv890n54 1 245345835 245348856 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549561,nsv549552 M 17421 2 11 "" dgv891n54 1 245345835 245359837 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549564,nsv549563,nsv549553,nsv549573,nsv549572,nsv549574 M 17421 0 15 ZNF124 dgv892n54 1 245346002 245359837 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549566,nsv549556 M 17421 2 0 ZNF124 nsv549562 1 245346172 245349943 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739586 M 17421 0 1 "" dgv893n54 1 245346337 245348856 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549565,nsv549569 M 17421 0 3 "" nsv549567 1 245346425 245373456 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739598,nssv739599 M 17421 0 2 ZNF124 nsv549570 1 245346910 245348856 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739602 M 17421 1 0 "" nsv549571 1 245347080 245348856 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739605,nssv739604,nssv739603,nssv739606 M 17421 1 3 "" nsv499487 1 245357629 245402239 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585490 M 9 0 0 ZNF124 nsv513639 1 245357650 245398823 OTHER inversion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626891 M 1 0 0 ZNF124 1 esv1225151 1 245357729 245358039 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4057241 M 2 0 0 ZNF124 HuRef nsv7192 1 245357754 245436952 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9427 M 9 0 0 MIR3916,ZNF124 NA18517 nsv821373 1 245358594 245360108 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421113 M 1 0 1 ZNF124 NA10851 dgv335e59 1 245358652 245359950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3396272,esv3365672,esv3393228 M 185 3 0 ZNF124 NA12878,NA12891,NA12892 esv24532 1 245358773 245359993 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12039 M 40 1 24 ZNF124 NA07037,NA07045,NA11931,NA11993,NA11995,NA12006,NA12239,NA12414,NA12489,NA12828,NA15510,NA18505,NA18517,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19114,NA19129,NA19190,NA19225,NA19240,NA19257 dgv894n54 1 245358867 245359501 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549575,nsv549576 M 17421 0 2 ZNF124 dgv895n54 1 245358867 245359837 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549581,nsv549584,nsv549583,nsv549578,nsv549577 M 17421 0 8 ZNF124 dgv896n54 1 245358867 245359837 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549579,nsv549580 M 17421 2 25 ZNF124 esv1201683 1 245358948 245359505 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3645770 M 2 0 1 ZNF124 HuRef nsv549582 1 245358971 245359501 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739646 M 17421 1 0 ZNF124 nsv549585 1 245359179 245359837 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739651 M 17421 0 1 ZNF124 nsv472596 1 245369286 245369286 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018071 M 9 1 0 ZNF124 NA18555 esv3365909 1 245381993 245382005 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674008 M 185 1 0 ZNF124 NA19239 esv3308500 1 245381996 245381997 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836720,essv7837317 M 185 2 0 ZNF124 NA19239,NA19240 nsv945438 1 245387450 245390284 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828643,nssv1828593,nssv1828641,nssv1828670,nssv1828662,nssv1828677,nssv1828688,nssv1828601,nssv1828684,nssv1828603,nssv1828666,nssv1828676,nssv1828624,nssv1828599,nssv1828644,nssv1828621,nssv1828618,nssv1828595,nssv1828625,nssv1828612,nssv1828646,nssv1828611,nssv1828626,nssv1828669,nssv1828642,nssv1828606,nssv1828660,nssv1828672,nssv1828664,nssv1828613,nssv1828650,nssv1828598,nssv1828634,nssv1828597,nssv1828648,nssv1828602,nssv1828647,nssv1828594,nssv1828661,nssv1828614,nssv1828652,nssv1828673,nssv1828619,nssv1828616,nssv1828680,nssv1828623,nssv1828636,nssv1828675,nssv1828656,nssv1828608,nssv1828629,nssv1828620,nssv1828615,nssv1828596,nssv1828659,nssv1828607,nssv1828682,nssv1828671,nssv1828686,nssv1828600,nssv1828637,nssv1828605,nssv1828655,nssv1828674,nssv1828645,nssv1828604,nssv1828628,nssv1828678,nssv1828630,nssv1828610,nssv1828638,nssv1828609,nssv1828685,nssv1828657,nssv1828592,nssv1828681,nssv1828640,nssv1828653,nssv1828639,nssv1828635,nssv1828622,nssv1828651,nssv1828683,nssv1828631,nssv1828617,nssv1828633,nssv1828632,nssv1828663,nssv1828687,nssv1828679,nssv1828654,nssv1828668,nssv1828665,nssv1828658,nssv1828627,nssv1828649,nssv1828667 M 97 10 0 ZNF124 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1441492 1 245400251 245400562 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3627339 M 2 0 0 ZNF124 HuRef nsv549586 1 245402816 245407407 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739652 M 17421 0 1 "" esv3330893 1 245406156 245406156 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825177 M 185 1 0 "" NA19240 nsv945439 1 245429114 245431472 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828703,nssv1827647,nssv1828690,nssv1828765,nssv1828696,nssv1828734,nssv1828773,nssv1828746,nssv1828767,nssv1828735,nssv1828691,nssv1828755,nssv1828718,nssv1828759,nssv1828769,nssv1828747,nssv1828701,nssv1828757,nssv1828708,nssv1828740,nssv1828709,nssv1828721,nssv1828692,nssv1827644,nssv1828700,nssv1828714,nssv1828695,nssv1828715,nssv1828711,nssv1828763,nssv1828699,nssv1828739,nssv1828710,nssv1828741,nssv1828717,nssv1827649,nssv1828766,nssv1828745,nssv1828770,nssv1828743,nssv1828713,nssv1828762,nssv1828694,nssv1827646,nssv1827640,nssv1827642,nssv1828705,nssv1828716,nssv1828772,nssv1828751,nssv1828693,nssv1827650,nssv1827641,nssv1828722,nssv1828697,nssv1828731,nssv1828771,nssv1828758,nssv1828702,nssv1828761,nssv1828698,nssv1828749,nssv1828704,nssv1828738,nssv1828768,nssv1828723,nssv1828720,nssv1828733,nssv1828706,nssv1828712,nssv1828707,nssv1828756,nssv1828753,nssv1827645,nssv1828752,nssv1828744,nssv1827651,nssv1828742,nssv1828727,nssv1828689,nssv1828748,nssv1828737,nssv1828736,nssv1828726,nssv1828754,nssv1828764,nssv1828725,nssv1828750,nssv1827648,nssv1828719,nssv1828724,nssv1827643,nssv1828760,nssv1828732,nssv1828728,nssv1828729,nssv1828730 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945440 1 245457987 245466888 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827656,nssv1827708,nssv1827731,nssv1827705,nssv1827737,nssv1827721,nssv1827659,nssv1827711,nssv1827661,nssv1827707,nssv1827736,nssv1827722,nssv1827734,nssv1827712,nssv1827672,nssv1827740,nssv1827658,nssv1827745,nssv1827662,nssv1827679,nssv1827654,nssv1827716,nssv1827666,nssv1827692,nssv1827681,nssv1827697,nssv1827664,nssv1827715,nssv1827663,nssv1827701,nssv1827655,nssv1827695,nssv1827667,nssv1827741,nssv1827683,nssv1827746,nssv1827674,nssv1827724,nssv1827673,nssv1827694,nssv1827676,nssv1827704,nssv1827733,nssv1827686,nssv1827735,nssv1827744,nssv1827665,nssv1827739,nssv1827657,nssv1827699,nssv1827732,nssv1827743,nssv1827668,nssv1827747,nssv1827729,nssv1827689,nssv1827680,nssv1827696,nssv1827660,nssv1827652,nssv1827738,nssv1827714,nssv1827653,nssv1827719,nssv1827670,nssv1827684,nssv1827669,nssv1827713,nssv1827730,nssv1827723,nssv1827671,nssv1827700,nssv1827690,nssv1827728,nssv1827742,nssv1827727,nssv1827685,nssv1827748,nssv1827717,nssv1827682,nssv1827677,nssv1827687,nssv1827710,nssv1827718,nssv1827725,nssv1827688,nssv1827675,nssv1827691,nssv1827678,nssv1827709,nssv1827693,nssv1827703,nssv1827698,nssv1827706,nssv1827702,nssv1827720,nssv1827726 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv549587 1 245466882 245505069 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739653 M 17421 0 1 VN1R5 nsv5299 1 245480533 245507555 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8303 M 9 1 0 VN1R5 NA12156 nsv506991 1 245498393 245504393 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619267,nssv620683 M 4 0 0 "" NA10860,NA15510 nsv833137 1 245503940 245674051 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1441756 M 95 1 0 NLRP3,ZNF496 nsv509790 1 245540925 245675801 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619836 M 4 1 0 NLRP3,ZNF496 NA10860 esv3360419 1 245542660 245542693 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863853 M 185 1 0 ZNF496 NA12005 esv2335854 1 245557484 245557939 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4994963 M 1 0 1 ZNF496 NA18507 esv4468 1 245557629 245557828 CNV loss Wang_et_al_2008 18987735 Sequencing essv26909 M 1 0 1 ZNF496 YH esv992675 1 245557660 245557738 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584775 M 3 0 1 ZNF496 HuRef esv21506 1 245561334 245562396 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17401 M 40 0 1 ZNF496 NA07045 dgv897n54 1 245561361 245562316 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549589,nsv549594 M 17421 5 5 ZNF496 dgv898n54 1 245561361 245562316 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549588,nsv549590,nsv549591,nsv549592 M 17421 0 6 ZNF496 dgv899n54 1 245561464 245562316 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549596,nsv549595,nsv549593 M 17421 4 0 ZNF496 esv1009044 1 245593015 245593234 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563817 M 3 1 0 "" HuRef esv1098160 1 245603395 245603590 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4234023 M 2 0 1 "" HuRef nsv506992 1 245607268 245613268 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617554,nssv623300 M 4 0 0 "" CHM,NA18994 nsv1011097 1 245632822 245733134 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705574 M 29084 1 0 NLRP3,OR2B11,OR2W5 esv2168945 1 245636157 245636617 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4576489 M 1 0 1 "" NA18507 esv2440127 1 245662677 245664140 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5192928 M 1 0 1 NLRP3 NA18507 esv24867 1 245663513 245663978 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20768 M 40 0 2 NLRP3 NA18517,NA19129 esv4825 1 245663794 245664071 CNV loss Wang_et_al_2008 18987735 Sequencing essv27266 M 1 0 1 NLRP3 YH esv3326129 1 245676389 245676408 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9599291 M 185 1 0 NLRP3 NA12814 esv3306486 1 245676398 245676399 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7766484 M 185 1 0 NLRP3 NA12814 esv4767 1 245688233 245688777 CNV loss Wang_et_al_2008 18987735 Sequencing essv27208 M 1 0 1 "" YH dgv115n67 1 245720161 245721648 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827753,nsv827742 M 31 0 2 OR2W5 AK4,NA18949 nsv827764 1 245721138 245721588 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1437280 M 31 0 1 OR2W5 NA18949 nsv945441 1 245727758 245737321 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827756,nssv1827837,nssv1827761,nssv1827792,nssv1827833,nssv1827800,nssv1827778,nssv1827804,nssv1827755,nssv1827795,nssv1827750,nssv1827806,nssv1827769,nssv1827781,nssv1827831,nssv1827819,nssv1827763,nssv1827799,nssv1827828,nssv1827811,nssv1827760,nssv1827818,nssv1827759,nssv1827803,nssv1827751,nssv1827776,nssv1827834,nssv1827782,nssv1827829,nssv1827805,nssv1827827,nssv1827808,nssv1827764,nssv1827841,nssv1827753,nssv1827794,nssv1827770,nssv1827786,nssv1827771,nssv1827817,nssv1827752,nssv1827813,nssv1827826,nssv1827812,nssv1827754,nssv1827791,nssv1827780,nssv1827809,nssv1827830,nssv1827798,nssv1827832,nssv1827821,nssv1827773,nssv1827801,nssv1827762,nssv1827843,nssv1827765,nssv1827844,nssv1827758,nssv1827749,nssv1827757,nssv1827789,nssv1827777,nssv1827783,nssv1827768,nssv1827840,nssv1827835,nssv1827810,nssv1827767,nssv1827779,nssv1827766,nssv1827787,nssv1827836,nssv1827838,nssv1827802,nssv1827793,nssv1827784,nssv1827796,nssv1827825,nssv1827839,nssv1827774,nssv1827820,nssv1827845,nssv1827842,nssv1827814,nssv1827785,nssv1827790,nssv1827772,nssv1827816,nssv1827807,nssv1827775,nssv1827823,nssv1827815,nssv1827797,nssv1827788,nssv1827822,nssv1827824 M 97 10 0 GCSAML HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1006136 1 245769301 245866988 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486628 M 29084 0 1 GCSAML,OR2G2,OR2G3 esv2759014 1 245781208 246388939 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757780,esv2756895 M 270 3 3 GCSAML,OR11L1,OR13G1,OR14A16,OR1C1,OR2AK2,OR2G2,OR2G3,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M5,OR2T8,OR2W3,OR6F1,TRIM58 NA06993,NA12753,NA18562,NA18632,NA19093,NA19127 nsv818889 1 245782621 245795585 CNV loss Wang_et_al_2007 17921354 SNP array nssv1416823 M 112 0 1 GCSAML NA19239 nsv524193 1 245786000 245790293 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700076 M 2026 0 1 GCSAML esv3442383 1 245819203 245819254 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8904040,essv8904039,essv8904038 M 185 3 0 OR2G2 NA12249,NA12750,NA12751 esv3306120 1 245819215 245819216 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7756832,essv7762984,essv7751035 M 185 3 0 OR2G2 NA12249,NA12750,NA12751 nsv1003572 1 245819449 245865133 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486352 M 29084 0 1 OR2G3 esv34503 1 245819830 246442693 CNV gain Pinto_et_al_2007 17911159 SNP array essv6986635,essv6978496,essv6990244,essv6978497,essv6978498 M 771 5 0 OR11L1,OR13G1,OR14A16,OR1C1,OR2AK2,OR2G3,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M5,OR2T8,OR2W3,OR6F1,TRIM58 NA19127 nsv1004736 1 245832278 245866988 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705576,nssv3705575 M 29084 2 0 OR2G3 esv3891403 1 245845511 245850513 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785471 M 3017 0 1 "" nsv515858 1 245850513 246935401 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv683771,nssv680499,nssv663332,nssv701896,nssv680387,nssv663459,nssv666845,nssv699854,nssv705170,nssv662693,nssv705468,nssv685956,nssv657573,nssv688039,nssv669542,nssv678232,nssv667555,nssv692239,nssv695919,nssv675536,nssv665034,nssv698574,nssv685153,nssv699878,nssv663229,nssv687997,nssv675717,nssv665551,nssv690861 M 2026 21 8 OR11L1,OR13G1,OR14A16,OR14C36,OR14I1,OR1C1,OR2AK2,OR2G6,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T10,OR2T11,OR2T12,OR2T2,OR2T27,OR2T29,OR2T3,OR2T33,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6,OR2T8,OR2W3,OR6F1,TRIM58 nsv9058 1 245867330 245870215 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25961 M 31 1 0 "" NA18860 esv1351964 1 245879205 245879256 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3734981 M 2 0 1 "" HuRef dgv604n100 1 245884702 246359781 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999033,nsv1013346,nsv1001985,nsv1005942,nsv1014174,nsv1007517,nsv1010461,nsv1014813 M 29084 15 0 OR11L1,OR13G1,OR14A16,OR1C1,OR2AK2,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2T8,OR2W3,OR6F1,TRIM58 esv2762235 1 245884714 246359793 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7007038 M 1109 1 0 OR11L1,OR13G1,OR14A16,OR1C1,OR2AK2,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2T8,OR2W3,OR6F1,TRIM58 RW_0624 esv2276963 1 245885772 245886206 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4759421 M 1 0 1 "" NA18507 nsv1013273 1 245886598 247045382 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497046 M 29084 1 0 LYPD8,OR11L1,OR13G1,OR14A16,OR14C36,OR14I1,OR1C1,OR2AK2,OR2G6,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T10,OR2T11,OR2T12,OR2T2,OR2T27,OR2T29,OR2T3,OR2T33,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6,OR2T8,OR2W3,OR6F1,TRIM58 nsv5310 1 245887109 245943968 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5094,nssv3848,nssv1823,nssv638 M 9 0 4 OR13G1,OR6F1 NA12878,NA18555,NA19129,NA19240 nsv998451 1 245894579 245931522 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3499075 M 29084 0 1 OR13G1 dgv605n100 1 245894579 246262379 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001590,nsv1014801,nsv1000522 M 29084 4 0 OR11L1,OR13G1,OR14A16,OR1C1,OR2AK2,OR2L13,OR2L1P,OR2L5,OR2L8,OR2T8,OR2W3,OR6F1,TRIM58 dgv606n100 1 245894579 246798656 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000142,nsv1014363 M 29084 2 0 OR11L1,OR13G1,OR14A16,OR14C36,OR1C1,OR2AK2,OR2G6,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T12,OR2T2,OR2T29,OR2T3,OR2T33,OR2T4,OR2T5,OR2T6,OR2T8,OR2W3,OR6F1,TRIM58 esv995624 1 245914901 245923178 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563807 M 3 0 1 "" HuRef nsv549597 1 245916096 246563486 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739674 M 17421 1 0 OR11L1,OR14A16,OR1C1,OR2AK2,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T12,OR2T33,OR2T8,OR2W3,OR6F1,TRIM58 nsv511753 1 245916640 245923218 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626400 M 1 0 1 "" 1 dgv26n16 1 245916649 245923951 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436208,nsv435869 M 2 0 2 "" NA15510,NA18505 esv2621496 1 245916715 245926368 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5288902 M 1 0 1 "" NA18507 esv8644 1 245916814 245923406 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31085 M 1 0 0 "" esv2304093 1 245916900 245923357 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4606133 M 1 0 1 "" NA18507 esv2482439 1 245916915 245924338 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5182496 M 1 0 1 "" NA18507 nsv508705 1 245916918 245935562 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617429,nssv619003,nssv622792,nssv620157 M 4 0 4 "" CHM,NA10860,NA15510,NA18994 esv5114 1 245917047 245923190 CNV loss Wang_et_al_2008 18987735 Sequencing essv27555 M 1 0 1 "" YH nsv160148 1 245917079 245923131 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178726 M 24 "" nsv498713 1 245917085 245923152 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585429 M 9 0 1 "" esv1692741 1 245917098 245923151 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4340252 M 2 0 1 "" HuRef nsv549598 1 245928139 245953625 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739675 M 17421 0 1 OR6F1 esv3322668 1 245931735 245931751 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8904044,essv8904043,essv8904041,essv8904045,essv8904046,essv8904042 M 185 6 0 "" NA18501,NA18504,NA18519,NA18856,NA18861,NA19093 esv3303595 1 245931741 245931742 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760029,essv7749277,essv7742194,essv7749617,essv7740521,essv7754765 M 185 6 0 "" NA18501,NA18504,NA18519,NA18856,NA18861,NA19093 dgv900n54 1 245944294 246047487 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549600,nsv549599 M 17421 0 2 OR14A16,OR1C1 nsv999381 1 245960480 246007815 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500150 M 29084 0 1 OR1C1 esv2421363 1 245972288 245972460 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5046633,essv5119527,essv5129187,essv5113282,essv5066481,essv5012096,essv5044294,essv5011911,essv5065357,essv5022039,essv5083203,essv5154988,essv5151663,essv5066879,essv5138548,essv5041590,essv5090390,essv5003300,essv5018614,essv5125010,essv5115434,essv5013000,essv5147587,essv5116876,essv5046005,essv5141048,essv5126144,essv5156062,essv5079540,essv5074229,essv5059695,essv5076331,essv5054277,essv5013629,essv5114493,essv5042324,essv5064065,essv5049459,essv5038768,essv5050111,essv5155289,essv5120617,essv5095496,essv5059752,essv5059107,essv5130194,essv5101972,essv5043529,essv5051170,essv5055328,essv5123970,essv5125535,essv5036288,essv5081171,essv5017258,essv5130783,essv5081582,essv5029049,essv5065742,essv5155566,essv5139923,essv5008899,essv5029016,essv5153737,essv5096516,essv5132703,essv5077706,essv5151262,essv5122796,essv5104952,essv5043176,essv5107649,essv5056441,essv5136471,essv5091076,essv5099036,essv5081986,essv5126504,essv5152166,essv5105911,essv5118091,essv5156115,essv5047929,essv5091317,essv5112353,essv5155795,essv5050046,essv5046381,essv5046044,essv5088878,essv5084030,essv5065689,essv5099381,essv5026656,essv5061946,essv5146750,essv5147317,essv5046059,essv5147388,essv5018486,essv5007430,essv5116336,essv5101853,essv5081742,essv5051882,essv5109974,essv5035214,essv5046905 M 1184 0 108 "" NA06986,NA06997,NA07031,NA10859,NA10865,NA11882,NA11891,NA12145,NA12739,NA12740,NA12748,NA12750,NA12776,NA12802,NA17967,NA17998,NA18485,NA18486,NA18487,NA18505,NA18510,NA18519,NA18624,NA18635,NA18855,NA18861,NA18863,NA18874,NA18875,NA18910,NA18934,NA19095,NA19096,NA19097,NA19099,NA19101,NA19114,NA19121,NA19123,NA19130,NA19132,NA19149,NA19190,NA19191,NA19192,NA19198,NA19202,NA19221,NA19223,NA19224,NA19311,NA19321,NA19327,NA19332,NA19350,NA19380,NA19381,NA19382,NA19403,NA19435,NA19457,NA19704,NA19708,NA19719,NA19721,NA19900,NA20289,NA20290,NA20292,NA20297,NA20334,NA20335,NA20344,NA20346,NA20348,NA20357,NA20363,NA20520,NA20529,NA20539,NA20582,NA20586,NA20801,NA20892,NA20909,NA21089,NA21090,NA21115,NA21144,NA21311,NA21320,NA21364,NA21399,NA21402,NA21404,NA21414,NA21415,NA21421,NA21423,NA21453,NA21454,NA21455,NA21457,NA21473,NA21513,NA21574,NA21717,NA21738 nsv549601 1 245972298 246340178 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739678 M 17421 0 1 OR11L1,OR14A16,OR1C1,OR2AK2,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2T8,OR2W3,TRIM58 nsv9069 1 245999626 246001561 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv26196 M 31 0 1 "" NA19240 nsv549602 1 246010859 246221922 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739679 M 17421 0 1 OR11L1,OR14A16,OR2AK2,OR2L13,OR2L1P,OR2L8,OR2T8,OR2W3,TRIM58 nsv1010087 1 246047299 246127362 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705577 M 29084 1 0 OR11L1,OR2W3,TRIM58 nsv1008024 1 246047299 246305204 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494792 M 29084 1 0 OR11L1,OR2AK2,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2T8,OR2W3,TRIM58 esv1011387 1 246051273 246051908 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565288 M 3 0 1 "" HuRef nsv827775 1 246089350 246089904 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1421511 M 31 1 0 TRIM58 NA18997 nsv819723 1 246095365 246101323 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419745 M 2 1 0 TRIM58 AK1 esv1620378 1 246100567 246100567 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4338244 M 2 1 0 TRIM58 HuRef esv3891415 1 246106336 247056594 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788421,essv25788095 M 3017 2 0 LYPD8,OR14C36,OR14I1,OR2AK2,OR2G6,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T10,OR2T11,OR2T12,OR2T2,OR2T27,OR2T29,OR2T3,OR2T33,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6,OR2T8,OR2W3,TRIM58 nsv5321 1 246109619 246145574 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5104,nssv8310 M 9 0 2 OR2W3,TRIM58 NA12156,NA19129 esv3442019 1 246110413 246110425 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863855 M 185 1 0 "" NA12005 nsv549603 1 246115610 246902072 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739680 M 17421 0 1 OR14C36,OR2AK2,OR2G6,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T10,OR2T11,OR2T12,OR2T2,OR2T27,OR2T29,OR2T3,OR2T33,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6,OR2T8,OR2W3 dgv27n16 1 246116403 246124718 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436268,nsv435797 M 2 0 2 "" NA15510,NA18505 nsv508706 1 246116916 246131589 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619004,nssv617439,nssv622793,nssv620158 M 4 0 4 OR2W3 CHM,NA10860,NA15510,NA18994 esv2567586 1 246117724 246124799 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282022 M 1 0 1 "" NA18507 esv5869 1 246117875 246124535 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28310 M 1 0 0 "" dgv3e194 1 246117913 246124535 CNV deletion Bentley_et_al_2008 18987734 Sequencing esv2330046,esv2167487 M 1 0 1 "" NA18507 esv991883 1 246117970 246124288 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564772 M 3 0 1 "" HuRef nsv511754 1 246118054 246124259 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626401 M 1 0 1 "" 1 esv2976 1 246118074 246124316 CNV loss Wang_et_al_2008 18987735 Sequencing essv25417 M 1 0 1 "" YH nsv498714 1 246118101 246124276 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585430 M 9 0 1 "" esv1333498 1 246124524 246124524 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4013278 M 2 1 0 "" HuRef dgv607n100 1 246125198 246891748 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011612,nsv1008304 M 29084 0 2 OR14C36,OR2AK2,OR2G6,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T10,OR2T11,OR2T12,OR2T2,OR2T27,OR2T29,OR2T3,OR2T33,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6,OR2T8,OR2W3 esv2750832 1 246127582 247134313 CNV gain Pinto_et_al_2007 17911159 SNP array essv6982109,essv6982110,essv6982111,essv6986087 M 771 4 0 LYPD8,MIR3124,OR14C36,OR14I1,OR2AK2,OR2G6,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T10,OR2T11,OR2T12,OR2T2,OR2T27,OR2T29,OR2T3,OR2T33,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6,OR2T8,SH3BP5L,ZNF672,ZNF692 BEC_521 nsv997552 1 246133758 246160795 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484194 M 29084 1 0 OR2T8 dgv608n100 1 246137720 246861075 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004592,nsv1013574,nsv998465 M 29084 3 0 OR14C36,OR2AK2,OR2G6,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T10,OR2T11,OR2T12,OR2T2,OR2T29,OR2T3,OR2T33,OR2T34,OR2T4,OR2T5,OR2T6,OR2T8 nsv549604 1 246137743 246563486 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739681 M 17421 1 0 OR2AK2,OR2L13,OR2L1P,OR2L2,OR2L3,OR2L5,OR2L8,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T12,OR2T33,OR2T8 nsv945442 1 246150823 246153008 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827847,nssv1827889,nssv1827928,nssv1827916,nssv1827853,nssv1827872,nssv1827857,nssv1827892,nssv1827930,nssv1827887,nssv1827852,nssv1827886,nssv1827866,nssv1827915,nssv1827860,nssv1827903,nssv1827924,nssv1827873,nssv1827925,nssv1827869,nssv1827856,nssv1827920,nssv1827923,nssv1827905,nssv1827861,nssv1827919,nssv1827926,nssv1827878,nssv1827855,nssv1827898,nssv1827868,nssv1827939,nssv1827858,nssv1827879,nssv1827931,nssv1827894,nssv1827859,nssv1827896,nssv1827875,nssv1827897,nssv1827851,nssv1827910,nssv1827865,nssv1827906,nssv1827848,nssv1827895,nssv1827927,nssv1827900,nssv1827850,nssv1827902,nssv1827870,nssv1827914,nssv1827929,nssv1827891,nssv1827862,nssv1827940,nssv1827877,nssv1827934,nssv1827874,nssv1827901,nssv1827854,nssv1827909,nssv1827849,nssv1827880,nssv1827932,nssv1827888,nssv1827867,nssv1827941,nssv1827864,nssv1827893,nssv1827863,nssv1827933,nssv1827846,nssv1827937,nssv1827883,nssv1827935,nssv1827921,nssv1827890,nssv1827938,nssv1827899,nssv1827936,nssv1827881,nssv1827911,nssv1827876,nssv1827907,nssv1827922,nssv1827918,nssv1827904,nssv1827871,nssv1827908,nssv1827882,nssv1827917,nssv1827885,nssv1827942,nssv1827913,nssv1827884,nssv1827912 M 97 10 0 OR2T8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1334450 1 246167115 246167115 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3728225 M 2 1 0 "" HuRef nsv945443 1 246178848 246180238 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828898,nssv1828922,nssv1828944,nssv1828907,nssv1828882,nssv1828894,nssv1828949,nssv1828956,nssv1828951,nssv1828936,nssv1827946,nssv1828962,nssv1828874,nssv1828938,nssv1828895,nssv1828954,nssv1828945,nssv1828940,nssv1828886,nssv1828905,nssv1828896,nssv1828915,nssv1828879,nssv1828908,nssv1827944,nssv1828902,nssv1828947,nssv1828943,nssv1828873,nssv1828900,nssv1828889,nssv1828893,nssv1828881,nssv1828903,nssv1827947,nssv1828924,nssv1828887,nssv1828942,nssv1827945,nssv1828925,nssv1828950,nssv1828933,nssv1828948,nssv1828913,nssv1828891,nssv1828959,nssv1828946,nssv1828919,nssv1828883,nssv1828937,nssv1828888,nssv1828941,nssv1828872,nssv1828899,nssv1828875,nssv1828917,nssv1828952,nssv1828939,nssv1828876,nssv1828963,nssv1828880,nssv1828892,nssv1828877,nssv1828928,nssv1828885,nssv1828958,nssv1828884,nssv1828909,nssv1828878,nssv1828935,nssv1828953,nssv1828916,nssv1828934,nssv1828923,nssv1828901,nssv1828912,nssv1828931,nssv1828930,nssv1828929,nssv1828906,nssv1828890,nssv1828927,nssv1828955,nssv1828960,nssv1827943,nssv1828897,nssv1828957,nssv1828911,nssv1828961,nssv1828921,nssv1828926,nssv1828904,nssv1828920,nssv1828914,nssv1828918,nssv1828932,nssv1828910 M 97 10 0 OR2L13,OR2L8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv29107 1 246191289 246192385 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv21379 M 40 1 0 OR2L13 NA18517 nsv9080 1 246194494 246196693 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv27638 M 31 1 0 OR2AK2,OR2L13 NA19173 nsv508070 1 246194656 246200656 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621494,nssv622309,nssv624237,nssv618528 M 4 0 0 OR2AK2,OR2L13 CHM,NA10860,NA15510,NA18994 nsv9091 1 246209746 246214292 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv27746,nssv25967 M 31 0 2 OR2L13 NA19132,NA19173 nsv549605 1 246214811 246221922 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739682 M 17421 0 1 OR2L13,OR2L1P dgv609n100 1 246217655 246286000 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000559,nsv1011974,nsv999696,nsv1008345 M 29084 0 4 OR2L13,OR2L1P,OR2L2,OR2L5 nsv945444 1 246219007 246221423 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828981,nssv1829015,nssv1828985,nssv1829025,nssv1828965,nssv1829051,nssv1828984,nssv1829053,nssv1828975,nssv1829017,nssv1829048,nssv1829012,nssv1828979,nssv1828996,nssv1828995,nssv1829011,nssv1828976,nssv1828994,nssv1828992,nssv1829059,nssv1829046,nssv1828999,nssv1829044,nssv1829004,nssv1828978,nssv1829033,nssv1828966,nssv1828964,nssv1828983,nssv1829055,nssv1829042,nssv1829035,nssv1829041,nssv1829002,nssv1828970,nssv1829026,nssv1828967,nssv1829038,nssv1828993,nssv1829019,nssv1829045,nssv1829005,nssv1828988,nssv1829037,nssv1828986,nssv1829007,nssv1828969,nssv1829040,nssv1828971,nssv1829022,nssv1828980,nssv1829000,nssv1829043,nssv1829030,nssv1828973,nssv1829021,nssv1828968,nssv1829016,nssv1829050,nssv1829039,nssv1829047,nssv1829034,nssv1828972,nssv1829010,nssv1829049,nssv1829003,nssv1828982,nssv1829014,nssv1828974,nssv1829060,nssv1828977,nssv1828990,nssv1829031,nssv1829036,nssv1829032,nssv1828989,nssv1828997,nssv1829028,nssv1829020,nssv1829056,nssv1828998,nssv1829057,nssv1828991,nssv1829027,nssv1829006,nssv1828987,nssv1829054,nssv1829024,nssv1829013,nssv1829052,nssv1829001,nssv1829009,nssv1829023,nssv1829018,nssv1829058,nssv1829029,nssv1829008 M 97 10 0 OR2L13,OR2L1P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv827786 1 246221013 246221634 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1438634 M 31 0 1 OR2L13,OR2L1P NA18973 nsv827797 1 246221013 246222049 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423986,nssv1431880,nssv1428877,nssv1424799,nssv1433480,nssv1425564,nssv1422425 M 31 0 7 OR2L13,OR2L1P AK12,AK2,AK20,AK4,NA18526,NA18552,NA18968 esv29477 1 246221157 246222161 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12979 M 40 0 3 OR2L13 NA12004,NA18861,NA19190 dgv901n54 1 246221184 246222078 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549607,nsv549611,nsv549606,nsv549608,nsv549610,nsv549609,nsv549612 M 17421 0 35 OR2L13 nsv549613 1 246221235 246228417 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739718 M 17421 0 1 OR2L13 dgv902n54 1 246221424 246222078 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549615,nsv549614,nsv549616,nsv549617 M 17421 0 7 OR2L13 nsv549618 1 246221579 246222078 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739726 M 17421 0 1 OR2L13 dgv903n54 1 246221630 246289494 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549620,nsv549619 M 17421 0 2 OR2L13,OR2L2,OR2L5 nsv549621 1 246228417 246316518 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739729 M 17421 0 1 OR2L13,OR2L2,OR2L3,OR2L5 nsv945449 1 246231211 246234614 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829062,nssv1826759,nssv1826778,nssv1826721,nssv1829070,nssv1826750,nssv1826717,nssv1826748,nssv1826780,nssv1826766,nssv1826725,nssv1826768,nssv1829068,nssv1826744,nssv1829076,nssv1826763,nssv1826727,nssv1826788,nssv1829080,nssv1826754,nssv1826776,nssv1826753,nssv1826718,nssv1826751,nssv1826724,nssv1826785,nssv1829071,nssv1826737,nssv1829073,nssv1826719,nssv1829078,nssv1826729,nssv1826774,nssv1826730,nssv1826720,nssv1826732,nssv1826779,nssv1826790,nssv1829064,nssv1826762,nssv1829075,nssv1826722,nssv1826777,nssv1829061,nssv1829063,nssv1826749,nssv1826773,nssv1826783,nssv1826716,nssv1826758,nssv1826775,nssv1826787,nssv1826782,nssv1826786,nssv1829079,nssv1826757,nssv1826781,nssv1826741,nssv1829066,nssv1826734,nssv1829077,nssv1826735,nssv1829074,nssv1826736,nssv1829065,nssv1826755,nssv1829067,nssv1826747,nssv1829069,nssv1826743,nssv1829072,nssv1826791,nssv1826740,nssv1826767,nssv1826772,nssv1826726,nssv1826752,nssv1826764,nssv1826769,nssv1826789,nssv1826723,nssv1826739,nssv1826792,nssv1826733,nssv1826746,nssv1826728,nssv1826761,nssv1826745,nssv1826760,nssv1826738,nssv1826742,nssv1826784,nssv1826765,nssv1826756,nssv1826771,nssv1826770,nssv1826731 M 97 10 0 OR2L13 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1004090 1 246238187 246283052 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3705581 M 29084 0 1 OR2L13,OR2L2,OR2L5 nsv1013071 1 246248794 246359781 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494076 M 29084 1 0 OR2L13,OR2L2,OR2L3,OR2L5,OR2M1P nsv945450 1 246250942 246252865 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1826872,nssv1826839,nssv1826794,nssv1826856,nssv1826822,nssv1826853,nssv1826808,nssv1826793,nssv1826877,nssv1826862,nssv1826870,nssv1826867,nssv1826797,nssv1826835,nssv1826878,nssv1826842,nssv1826824,nssv1826818,nssv1826815,nssv1826860,nssv1826875,nssv1826851,nssv1826821,nssv1826881,nssv1826876,nssv1826845,nssv1826806,nssv1826828,nssv1826812,nssv1826850,nssv1826803,nssv1826837,nssv1826798,nssv1826854,nssv1826817,nssv1826829,nssv1826874,nssv1826847,nssv1826796,nssv1826863,nssv1826871,nssv1826887,nssv1826814,nssv1826885,nssv1826809,nssv1826882,nssv1826879,nssv1826884,nssv1826873,nssv1826819,nssv1826799,nssv1826846,nssv1826800,nssv1826834,nssv1826801,nssv1826859,nssv1826795,nssv1826883,nssv1826804,nssv1826820,nssv1826813,nssv1826858,nssv1826811,nssv1826886,nssv1826810,nssv1826861,nssv1826802,nssv1826838,nssv1826807,nssv1826865,nssv1826805,nssv1826880,nssv1826827,nssv1826826,nssv1826832,nssv1826816,nssv1826833,nssv1826841,nssv1826823,nssv1826840,nssv1826864,nssv1826888,nssv1826831,nssv1826855,nssv1826868,nssv1826852,nssv1826844,nssv1826866,nssv1826836,nssv1826889,nssv1826869,nssv1826848,nssv1826830,nssv1826849,nssv1826843,nssv1826857,nssv1826825 M 97 10 0 OR2L13,OR2L5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945451 1 246267588 246270811 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1826894,nssv1826942,nssv1826891,nssv1826945,nssv1826897,nssv1826917,nssv1826905,nssv1826955,nssv1826974,nssv1826927,nssv1826919,nssv1826954,nssv1826911,nssv1826959,nssv1826972,nssv1826944,nssv1826968,nssv1826932,nssv1826969,nssv1826950,nssv1826892,nssv1826915,nssv1826970,nssv1826953,nssv1826975,nssv1826964,nssv1826912,nssv1826957,nssv1826918,nssv1826943,nssv1826895,nssv1826934,nssv1826909,nssv1826925,nssv1826921,nssv1826948,nssv1826973,nssv1826939,nssv1826903,nssv1826890,nssv1826914,nssv1826936,nssv1826900,nssv1826984,nssv1826971,nssv1826960,nssv1826967,nssv1826980,nssv1826906,nssv1826940,nssv1826904,nssv1826979,nssv1826902,nssv1826916,nssv1826898,nssv1826924,nssv1826899,nssv1826931,nssv1826976,nssv1826983,nssv1826901,nssv1826977,nssv1826910,nssv1826981,nssv1826907,nssv1826951,nssv1826893,nssv1826922,nssv1826908,nssv1826956,nssv1826896,nssv1826929,nssv1826930,nssv1826923,nssv1826913,nssv1826947,nssv1826926,nssv1826985,nssv1826961,nssv1826946,nssv1826958,nssv1826941,nssv1826952,nssv1826937,nssv1826962,nssv1826949,nssv1826965,nssv1826935,nssv1826978,nssv1826986,nssv1826982,nssv1826933,nssv1826928,nssv1826963,nssv1826920,nssv1826938,nssv1826966 M 97 10 0 OR2L13,OR2L2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2613716 1 246274098 246275545 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5209058 M 1 0 1 OR2L13 NA18507 esv2035728 1 246274239 246274956 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4580098 M 1 0 1 OR2L13 NA18507 esv3861 1 246274275 246274951 CNV loss Wang_et_al_2008 18987735 Sequencing essv26302 M 1 0 1 OR2L13 YH nsv945452 1 246276115 246276615 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1827001,nssv1827977,nssv1826994,nssv1827957,nssv1827002,nssv1827019,nssv1826998,nssv1827950,nssv1826988,nssv1827954,nssv1826990,nssv1827952,nssv1826989,nssv1827966,nssv1827995,nssv1827970,nssv1827996,nssv1827985,nssv1826996,nssv1827014,nssv1827988,nssv1827968,nssv1827990,nssv1827979,nssv1826991,nssv1827983,nssv1827991,nssv1827973,nssv1827009,nssv1827980,nssv1827015,nssv1827012,nssv1827006,nssv1827022,nssv1827008,nssv1827981,nssv1826992,nssv1827961,nssv1827000,nssv1827986,nssv1827011,nssv1826987,nssv1826999,nssv1827959,nssv1827018,nssv1827967,nssv1827003,nssv1827010,nssv1827992,nssv1827974,nssv1827994,nssv1827963,nssv1827016,nssv1827956,nssv1827007,nssv1827971,nssv1827989,nssv1827960,nssv1826995,nssv1827965,nssv1827993,nssv1827975,nssv1826993,nssv1827999,nssv1827997,nssv1827962,nssv1827005,nssv1828003,nssv1827004,nssv1828005,nssv1826997,nssv1828000,nssv1827948,nssv1827953,nssv1828006,nssv1828002,nssv1827023,nssv1827020,nssv1827017,nssv1827951,nssv1827958,nssv1828004,nssv1827969,nssv1828001,nssv1827998,nssv1827964,nssv1827976,nssv1827955,nssv1827987,nssv1827972,nssv1827984,nssv1827013,nssv1827949,nssv1827021,nssv1827978,nssv1828007,nssv1827982 M 97 10 0 OR2L13 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv610n100 1 246289035 246321888 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999437,nsv1007923 M 29084 0 3 OR2L13,OR2L3 nsv945453 1 246290709 246291926 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828086,nssv1828033,nssv1828009,nssv1828035,nssv1828015,nssv1828079,nssv1828039,nssv1828047,nssv1828093,nssv1828080,nssv1828092,nssv1828075,nssv1828011,nssv1828104,nssv1828018,nssv1828052,nssv1828023,nssv1828084,nssv1828028,nssv1828048,nssv1828029,nssv1828069,nssv1828022,nssv1828049,nssv1828087,nssv1828081,nssv1828088,nssv1828034,nssv1828014,nssv1828051,nssv1828017,nssv1828055,nssv1828085,nssv1828074,nssv1828021,nssv1828065,nssv1828027,nssv1828067,nssv1828030,nssv1828054,nssv1828019,nssv1828076,nssv1828010,nssv1828041,nssv1828091,nssv1828040,nssv1828089,nssv1828077,nssv1828032,nssv1828063,nssv1828013,nssv1828100,nssv1828020,nssv1828082,nssv1828090,nssv1828064,nssv1828024,nssv1828050,nssv1828012,nssv1828101,nssv1828016,nssv1828078,nssv1828094,nssv1828042,nssv1828036,nssv1828099,nssv1828037,nssv1828102,nssv1828026,nssv1828068,nssv1828025,nssv1828031,nssv1828096,nssv1828072,nssv1828056,nssv1828103,nssv1828060,nssv1828045,nssv1828062,nssv1828057,nssv1828008,nssv1828046,nssv1828058,nssv1828044,nssv1828059,nssv1828097,nssv1828073,nssv1828061,nssv1828070,nssv1828053,nssv1828083,nssv1828071,nssv1828095,nssv1828098,nssv1828043,nssv1828066,nssv1828038 M 97 10 0 OR2L13,OR2L3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3381430 1 246292308 246292327 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9599302 M 185 1 0 OR2L13 NA12873 dgv17e55 1 246309151 246884005 CNV loss Pinto_et_al_2007 17911159 SNP array esv2750834,esv2750833 M 771 0 5 OR14C36,OR2G6,OR2L13,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T10,OR2T11,OR2T12,OR2T2,OR2T27,OR2T29,OR2T3,OR2T33,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6 BEC_592,BEC_693 dgv904n54 1 246311826 246505829 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549623,nsv549622 M 17421 3 0 OR2L13,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2T33 1780854079_A dgv611n100 1 246312679 246505552 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv999950,nsv1011102,nsv1010468,nsv1007322 M 29084 5 0 OR2L13,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2T33 nsv945454 1 246312876 246314678 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828112,nssv1828477,nssv1828491,nssv1828141,nssv1828136,nssv1828508,nssv1828497,nssv1828140,nssv1828495,nssv1828503,nssv1828115,nssv1828469,nssv1828490,nssv1828467,nssv1828121,nssv1828476,nssv1828125,nssv1828146,nssv1828116,nssv1828507,nssv1828119,nssv1828473,nssv1828108,nssv1828475,nssv1828126,nssv1828152,nssv1828498,nssv1828156,nssv1828493,nssv1828145,nssv1828120,nssv1828149,nssv1828134,nssv1828143,nssv1828117,nssv1828471,nssv1828111,nssv1828130,nssv1828127,nssv1828478,nssv1828129,nssv1828135,nssv1828106,nssv1828132,nssv1828110,nssv1828474,nssv1828494,nssv1828148,nssv1828492,nssv1828488,nssv1828118,nssv1828480,nssv1828496,nssv1828131,nssv1828109,nssv1828502,nssv1828124,nssv1828466,nssv1828113,nssv1828506,nssv1828133,nssv1828151,nssv1828114,nssv1828137,nssv1828107,nssv1828138,nssv1828499,nssv1828504,nssv1828123,nssv1828144,nssv1828122,nssv1828484,nssv1828479,nssv1828500,nssv1828128,nssv1828486,nssv1828489,nssv1828472,nssv1828468,nssv1828481,nssv1828139,nssv1828142,nssv1828153,nssv1828485,nssv1828470,nssv1828509,nssv1828505,nssv1828105,nssv1828483,nssv1828155,nssv1828157,nssv1828487,nssv1828482,nssv1828147,nssv1828154,nssv1828150,nssv1828501 M 97 10 0 OR2L13 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1006563 1 246315719 246501432 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493481,nssv3501919,nssv3485722,nssv3489362,nssv3494165,nssv3489508,nssv3490366,nssv3488722 M 29084 7 1 OR2L13,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5 dgv612n100 1 246315719 246505075 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006041,nsv997981 M 29084 0 2 OR2L13,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5,OR2T33 nsv468861 1 246327952 246482285 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv543923 M 1557 1 0 OR2L13,OR2M1P,OR2M2,OR2M3,OR2M4,OR2M5 1780854079_A nsv1011782 1 246344862 246420244 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3495368 M 29084 1 0 OR2M1P,OR2M2,OR2M5 nsv945457 1 246352073 246365092 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829544,nssv1829536,nssv1829527,nssv1828528,nssv1829525,nssv1829533,nssv1829491,nssv1828530,nssv1829523,nssv1828535,nssv1829494,nssv1828534,nssv1829519,nssv1828556,nssv1829489,nssv1829528,nssv1828553,nssv1829535,nssv1829524,nssv1828536,nssv1828563,nssv1828538,nssv1829503,nssv1828546,nssv1829497,nssv1828547,nssv1829541,nssv1828541,nssv1829540,nssv1829531,nssv1829513,nssv1828533,nssv1829508,nssv1828549,nssv1828554,nssv1828558,nssv1829514,nssv1828537,nssv1829500,nssv1829529,nssv1828561,nssv1828555,nssv1829502,nssv1829532,nssv1829507,nssv1828551,nssv1829495,nssv1829530,nssv1829543,nssv1828532,nssv1829510,nssv1828543,nssv1828550,nssv1828540,nssv1829542,nssv1828548,nssv1829545,nssv1828529,nssv1829526,nssv1828531,nssv1829515,nssv1828539,nssv1829511,nssv1828542,nssv1829516,nssv1829537,nssv1828560,nssv1828545,nssv1828527,nssv1828544,nssv1829518,nssv1829534,nssv1828557,nssv1829505,nssv1829539,nssv1829493,nssv1828559,nssv1829538,nssv1829488,nssv1828562,nssv1829490,nssv1829521,nssv1829496,nssv1829504,nssv1829512,nssv1829501,nssv1829520,nssv1829499,nssv1829509,nssv1828552,nssv1829498,nssv1829547,nssv1829546,nssv1829517,nssv1829522,nssv1829492,nssv1829506 M 97 10 0 OR2M1P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv549624 1 246352979 246409460 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739732 M 17421 0 1 OR2M5 dgv613n100 1 246359781 246727163 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014913,nsv1002682,nsv1014378,nsv1000984 M 29084 0 4 OR14C36,OR2M2,OR2M3,OR2M4,OR2M5,OR2M7,OR2T1,OR2T12,OR2T2,OR2T3,OR2T33,OR2T4,OR2T5,OR2T6 nsv945458 1 246367324 246367944 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829577,nssv1829603,nssv1829566,nssv1829638,nssv1829549,nssv1829584,nssv1829627,nssv1829583,nssv1829569,nssv1829609,nssv1829633,nssv1829591,nssv1829559,nssv1829571,nssv1829561,nssv1829618,nssv1829565,nssv1829644,nssv1829556,nssv1829600,nssv1829551,nssv1829598,nssv1829632,nssv1829586,nssv1829576,nssv1829604,nssv1829625,nssv1829621,nssv1829555,nssv1829622,nssv1829557,nssv1829624,nssv1829567,nssv1829588,nssv1829634,nssv1829594,nssv1829630,nssv1829616,nssv1829628,nssv1829611,nssv1829563,nssv1829597,nssv1829560,nssv1829575,nssv1829558,nssv1829580,nssv1829554,nssv1829637,nssv1829562,nssv1829607,nssv1829629,nssv1829581,nssv1829564,nssv1829574,nssv1829572,nssv1829605,nssv1829553,nssv1829642,nssv1829626,nssv1829640,nssv1829570,nssv1829610,nssv1829579,nssv1829639,nssv1829568,nssv1829548,nssv1829550,nssv1829592,nssv1829552,nssv1829623,nssv1829631,nssv1829641,nssv1829573,nssv1829590,nssv1829620,nssv1829585,nssv1829582,nssv1829612,nssv1829599,nssv1829593,nssv1829608,nssv1829636,nssv1829613,nssv1829578,nssv1829596,nssv1829635,nssv1829615,nssv1829602,nssv1829587,nssv1829595,nssv1829643,nssv1829606,nssv1829601,nssv1829617,nssv1829614,nssv1829589,nssv1829619 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945459 1 246375141 246383322 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829646,nssv1829684,nssv1829666,nssv1829733,nssv1829647,nssv1829703,nssv1829663,nssv1829680,nssv1829662,nssv1829716,nssv1829729,nssv1829740,nssv1829658,nssv1829681,nssv1829652,nssv1829671,nssv1829724,nssv1829701,nssv1829731,nssv1829686,nssv1829664,nssv1829715,nssv1829656,nssv1829706,nssv1829657,nssv1829670,nssv1829648,nssv1829668,nssv1829727,nssv1829718,nssv1829651,nssv1829711,nssv1829676,nssv1829699,nssv1829654,nssv1829741,nssv1829730,nssv1829719,nssv1829722,nssv1829697,nssv1829673,nssv1829693,nssv1829725,nssv1829700,nssv1829726,nssv1829685,nssv1829659,nssv1829721,nssv1829669,nssv1829735,nssv1829650,nssv1829688,nssv1829667,nssv1829708,nssv1829661,nssv1829720,nssv1829655,nssv1829677,nssv1829665,nssv1829704,nssv1829660,nssv1829694,nssv1829728,nssv1829672,nssv1829674,nssv1829702,nssv1829653,nssv1829734,nssv1829723,nssv1829683,nssv1829649,nssv1829691,nssv1829738,nssv1829737,nssv1829713,nssv1829732,nssv1829739,nssv1829696,nssv1829689,nssv1829678,nssv1829687,nssv1829709,nssv1829717,nssv1829690,nssv1829698,nssv1829705,nssv1829710,nssv1829645,nssv1829679,nssv1829707,nssv1829712,nssv1829736,nssv1829695,nssv1829682,nssv1829675,nssv1829714,nssv1829692 M 97 10 0 OR2M5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv549625 1 246383029 246429202 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739733 M 17421 1 0 OR2M2 nsv9103 1 246386026 246558125 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv26192 M 31 0 1 OR2M2,OR2M3,OR2M4,OR2M7,OR2T12,OR2T33 NA19132 dgv614n100 1 246388939 246493451 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997302,nsv1005709,nsv997866 M 29084 0 3 OR2M2,OR2M3,OR2M4 nsv549626 1 246407223 246614568 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739734 M 17421 0 1 OR14C36,OR2M2,OR2M3,OR2M4,OR2M7,OR2T12,OR2T33,OR2T4 dgv905n54 1 246409460 246563486 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549627,nsv549628 M 17421 2 0 OR2M2,OR2M3,OR2M4,OR2M7,OR2T12,OR2T33 nsv1001474 1 246409460 246726795 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485801 M 29084 1 0 OR14C36,OR2M2,OR2M3,OR2M4,OR2M7,OR2T1,OR2T12,OR2T2,OR2T3,OR2T33,OR2T4,OR2T5,OR2T6 nsv945460 1 246409708 246410314 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830437,nssv1829792,nssv1830433,nssv1830423,nssv1829743,nssv1829782,nssv1829760,nssv1829789,nssv1829763,nssv1830412,nssv1830434,nssv1830421,nssv1829759,nssv1829772,nssv1829755,nssv1830422,nssv1829773,nssv1829795,nssv1830435,nssv1830413,nssv1829749,nssv1830415,nssv1829748,nssv1829781,nssv1829761,nssv1829778,nssv1829754,nssv1830420,nssv1830429,nssv1829777,nssv1830431,nssv1829774,nssv1829753,nssv1829767,nssv1829745,nssv1829794,nssv1830430,nssv1829765,nssv1829744,nssv1829783,nssv1829752,nssv1830416,nssv1829756,nssv1830427,nssv1829770,nssv1830426,nssv1830428,nssv1830425,nssv1830432,nssv1829791,nssv1829747,nssv1829769,nssv1829766,nssv1829788,nssv1829762,nssv1829785,nssv1829764,nssv1830418,nssv1829758,nssv1829780,nssv1829771,nssv1829790,nssv1830436,nssv1829768,nssv1829757,nssv1830414,nssv1829750,nssv1830424,nssv1829751,nssv1829775,nssv1829746,nssv1829787,nssv1829776,nssv1829793,nssv1830419,nssv1830417,nssv1829779,nssv1829784,nssv1829742,nssv1829786 M 97 10 0 OR2M2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945461 1 246410314 246424871 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830520,nssv1828781,nssv1830444,nssv1830491,nssv1830521,nssv1830499,nssv1830439,nssv1830512,nssv1830442,nssv1830468,nssv1830459,nssv1830485,nssv1830456,nssv1830513,nssv1830452,nssv1830493,nssv1830446,nssv1830476,nssv1830447,nssv1828785,nssv1830448,nssv1830494,nssv1830522,nssv1830508,nssv1830455,nssv1830477,nssv1830453,nssv1830495,nssv1830516,nssv1830511,nssv1830458,nssv1828782,nssv1830517,nssv1830489,nssv1830440,nssv1830505,nssv1830469,nssv1828777,nssv1828774,nssv1830461,nssv1830515,nssv1830472,nssv1830457,nssv1830481,nssv1830518,nssv1830510,nssv1830451,nssv1830514,nssv1830450,nssv1830483,nssv1830466,nssv1830465,nssv1830449,nssv1828783,nssv1830441,nssv1830507,nssv1830445,nssv1830496,nssv1830467,nssv1830506,nssv1830519,nssv1830503,nssv1830443,nssv1828779,nssv1830454,nssv1830484,nssv1830462,nssv1830463,nssv1830460,nssv1830487,nssv1828775,nssv1830509,nssv1830498,nssv1830501,nssv1830473,nssv1830475,nssv1830470,nssv1830502,nssv1830478,nssv1830492,nssv1830479,nssv1828776,nssv1830482,nssv1828784,nssv1830486,nssv1830500,nssv1828778,nssv1830471,nssv1830504,nssv1828780,nssv1830480,nssv1830438,nssv1830474,nssv1830488,nssv1830497,nssv1830464,nssv1830490 M 97 10 0 OR2M2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv23828 1 246417306 246418897 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16385 M 40 12 0 "" NA07045,NA11931,NA12004,NA12239,NA12287,NA12489,NA18511,NA18523,NA18858,NA19108,NA19129,NA19257 esv2515212 1 246417374 246419155 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5383103 M 1 0 1 "" NA18507 esv3443179 1 246417652 246418250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692214 M 185 1 0 "" NA19239 esv1772703 1 246417663 246417663 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3955895 M 2 1 0 "" HuRef esv1706280 1 246417989 246418509 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3987592 M 2 0 1 "" HuRef nsv511148 1 246419262 246428962 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625977 M 1 0 1 "" 1 nsv549629 1 246426649 246502454 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739737 M 17421 1 0 OR2M3,OR2M4 nsv947477 1 246426686 246431086 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2756918 M 97 1 0 "" HGDP00998 nsv945462 1 246432999 246441247 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1828814,nssv1828811,nssv1828787,nssv1828832,nssv1828798,nssv1828855,nssv1828803,nssv1828857,nssv1828788,nssv1828827,nssv1828792,nssv1830105,nssv1828870,nssv1828834,nssv1828796,nssv1828852,nssv1828864,nssv1828862,nssv1828793,nssv1830109,nssv1828807,nssv1830106,nssv1830104,nssv1828821,nssv1828863,nssv1828861,nssv1828789,nssv1828822,nssv1828815,nssv1828812,nssv1828866,nssv1828843,nssv1828817,nssv1828818,nssv1828868,nssv1828826,nssv1828806,nssv1828836,nssv1828800,nssv1828856,nssv1828801,nssv1830113,nssv1828805,nssv1828842,nssv1828797,nssv1828844,nssv1828808,nssv1828838,nssv1828791,nssv1828860,nssv1828867,nssv1828813,nssv1828810,nssv1828854,nssv1828795,nssv1828853,nssv1828790,nssv1828819,nssv1828802,nssv1828858,nssv1828871,nssv1828848,nssv1828869,nssv1830108,nssv1828794,nssv1830107,nssv1828799,nssv1828830,nssv1828865,nssv1828828,nssv1828804,nssv1828820,nssv1828809,nssv1828846,nssv1828837,nssv1828835,nssv1830114,nssv1828850,nssv1830111,nssv1828849,nssv1828831,nssv1830110,nssv1828823,nssv1828851,nssv1828824,nssv1828786,nssv1828839,nssv1828859,nssv1828833,nssv1828841,nssv1828829,nssv1828840,nssv1828845,nssv1828847,nssv1828825,nssv1830112,nssv1828816 M 97 10 0 OR2M3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv549630 1 246444411 246755452 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739738 M 17421 0 1 OR14C36,OR2G6,OR2M4,OR2M7,OR2T1,OR2T12,OR2T2,OR2T3,OR2T33,OR2T4,OR2T5,OR2T6 nsv478305 1 246451661 246451661 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017976 M 9 1 0 "" NA18507 nsv945463 1 246502046 246503725 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830121,nssv1830190,nssv1830129,nssv1830154,nssv1830116,nssv1830147,nssv1830144,nssv1830160,nssv1830132,nssv1830142,nssv1830135,nssv1830150,nssv1830194,nssv1830155,nssv1830136,nssv1830178,nssv1830199,nssv1830206,nssv1830200,nssv1830183,nssv1830201,nssv1830162,nssv1830130,nssv1830173,nssv1830133,nssv1830179,nssv1830143,nssv1830184,nssv1830122,nssv1830169,nssv1830124,nssv1830187,nssv1830128,nssv1830158,nssv1830134,nssv1830115,nssv1830195,nssv1830141,nssv1830193,nssv1830175,nssv1830125,nssv1830210,nssv1830197,nssv1830202,nssv1830127,nssv1830153,nssv1830126,nssv1830157,nssv1830119,nssv1830203,nssv1830198,nssv1830182,nssv1830117,nssv1830148,nssv1830192,nssv1830186,nssv1830118,nssv1830145,nssv1830146,nssv1830165,nssv1830196,nssv1830149,nssv1830120,nssv1830176,nssv1830139,nssv1830164,nssv1830131,nssv1830168,nssv1830123,nssv1830159,nssv1830137,nssv1830151,nssv1830207,nssv1830189,nssv1830171,nssv1830191,nssv1830163,nssv1830180,nssv1830152,nssv1830205,nssv1830211,nssv1830188,nssv1830156,nssv1830138,nssv1830208,nssv1830172,nssv1830174,nssv1830140,nssv1830181,nssv1830167,nssv1830166,nssv1830170,nssv1830185,nssv1830204,nssv1830209,nssv1830177,nssv1830161 M 97 10 0 OR2T33 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945464 1 246524050 246525467 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830214,nssv1830235,nssv1830294,nssv1830245,nssv1830297,nssv1830301,nssv1830290,nssv1830261,nssv1830213,nssv1830306,nssv1830226,nssv1830237,nssv1830243,nssv1830257,nssv1830233,nssv1830275,nssv1830227,nssv1830280,nssv1830223,nssv1830305,nssv1830232,nssv1830244,nssv1830296,nssv1830247,nssv1830215,nssv1830266,nssv1830219,nssv1830250,nssv1830229,nssv1830254,nssv1830240,nssv1830284,nssv1830218,nssv1830270,nssv1830230,nssv1830281,nssv1830231,nssv1830276,nssv1830289,nssv1830279,nssv1830225,nssv1830303,nssv1830224,nssv1830251,nssv1830292,nssv1830239,nssv1830221,nssv1830252,nssv1830216,nssv1830272,nssv1830222,nssv1830300,nssv1830291,nssv1830242,nssv1830293,nssv1830285,nssv1830217,nssv1830299,nssv1830298,nssv1830255,nssv1830236,nssv1830249,nssv1830228,nssv1830248,nssv1830220,nssv1830307,nssv1830234,nssv1830283,nssv1830295,nssv1830259,nssv1830241,nssv1830274,nssv1830212,nssv1830265,nssv1830238,nssv1830256,nssv1830262,nssv1830273,nssv1830287,nssv1830277,nssv1830268,nssv1830260,nssv1830264,nssv1830308,nssv1830269,nssv1830271,nssv1830282,nssv1830286,nssv1830278,nssv1830302,nssv1830288,nssv1830258,nssv1830263,nssv1830304,nssv1830267,nssv1830253,nssv1830246 M 97 10 0 OR2T12 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1114163 1 246536735 246536735 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3770159 M 2 1 0 "" HuRef esv1438113 1 246536823 246536823 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3851309 M 2 1 0 "" HuRef nsv945465 1 246547438 246554461 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830323,nssv1830354,nssv1830395,nssv1830371,nssv1830387,nssv1830401,nssv1830391,nssv1830366,nssv1830315,nssv1830382,nssv1830310,nssv1830360,nssv1830329,nssv1830343,nssv1830311,nssv1830350,nssv1830330,nssv1830398,nssv1830393,nssv1830403,nssv1830326,nssv1830352,nssv1830321,nssv1830374,nssv1830338,nssv1830332,nssv1830327,nssv1830358,nssv1830324,nssv1830379,nssv1830318,nssv1830341,nssv1830312,nssv1830355,nssv1830322,nssv1830377,nssv1830340,nssv1830373,nssv1830328,nssv1830363,nssv1830389,nssv1830334,nssv1830319,nssv1830381,nssv1830337,nssv1830349,nssv1830386,nssv1830400,nssv1830316,nssv1830344,nssv1830392,nssv1830402,nssv1830313,nssv1830376,nssv1830388,nssv1830372,nssv1830390,nssv1830367,nssv1830394,nssv1830378,nssv1830314,nssv1830397,nssv1830333,nssv1830347,nssv1830325,nssv1830336,nssv1830320,nssv1830369,nssv1830317,nssv1830380,nssv1830331,nssv1830361,nssv1830396,nssv1830404,nssv1830348,nssv1830351,nssv1830345,nssv1830342,nssv1830309,nssv1830335,nssv1830356,nssv1830368,nssv1830362,nssv1830370,nssv1830365,nssv1830359,nssv1830353,nssv1830346,nssv1830375,nssv1830357,nssv1830405,nssv1830339,nssv1830383,nssv1830399,nssv1830384,nssv1830385,nssv1830364 M 97 10 0 OR2M7 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv20n17 1 246554261 246913992 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437274,nsv437273 M 60 0 2 OR14C36,OR14I1,OR2G6,OR2M7,OR2T1,OR2T10,OR2T11,OR2T2,OR2T27,OR2T29,OR2T3,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6 NA19103,NA19221 dgv906n54 1 246560134 246924302 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549632,nsv549631 M 17421 2 0 OR14C36,OR14I1,OR2G6,OR2T1,OR2T10,OR2T11,OR2T2,OR2T27,OR2T29,OR2T3,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6 esv2759015 1 246566732 246931997 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757781,esv2756896 M 270 1 59 OR14C36,OR14I1,OR2G6,OR2T1,OR2T10,OR2T11,OR2T2,OR2T27,OR2T29,OR2T3,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6 NA06985,NA07000,NA07357,NA10854,NA10861,NA11829,NA11840,NA12234,NA12761,NA12801,NA12813,NA12878,NA18505,NA18508,NA18515,NA18516,NA18522,NA18523,NA18550,NA18558,NA18605,NA18611,NA18622,NA18632,NA18635,NA18856,NA18857,NA18859,NA18860,NA18871,NA18872,NA18948,NA18966,NA19000,NA19099,NA19100,NA19103,NA19119,NA19129,NA19130,NA19131,NA19138,NA19139,NA19141,NA19142,NA19144,NA19152,NA19154,NA19159,NA19161,NA19171,NA19194,NA19202,NA19206,NA19208,NA19221,NA19222,NA19223,NA19240 nsv428357 1 246566732 246944046 CNV loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv453476,nssv453498,nssv453465,nssv453509,nssv453242,nssv453419,nssv453441,nssv453487,nssv453397,nssv453430,nssv453452,nssv453408 M 62 0 12 OR14C36,OR14I1,OR2G6,OR2T1,OR2T10,OR2T11,OR2T2,OR2T27,OR2T29,OR2T3,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6 HGDP00460,HGDP00463,HGDP00471,HGDP00473,HGDP00476,HGDP00986,HGDP01086,HGDP01089,HGDP01093,NA18498,NA19113,NA19257 nsv5332 1 246570993 246679548 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv658 M 9 0 1 OR14C36,OR2T1,OR2T4,OR2T6 NA19240 nsv1004790 1 246576118 246939269 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496801,nssv3489756,nssv3705583,nssv3487465,nssv3499369,nssv3705584 M 29084 6 0 OR14C36,OR14I1,OR2G6,OR2T1,OR2T10,OR2T11,OR2T2,OR2T27,OR2T29,OR2T3,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6 nsv9114 1 246579531 246581375 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv27926 M 31 1 0 OR14C36 NA18517 esv3308247 1 246580210 246580211 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7836926,essv7838436,essv7838580,essv7837327 M 185 4 0 "" NA12891,NA19238,NA19239,NA19240 esv3392405 1 246580211 246580223 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674010,essv8674011 M 185 2 0 "" NA19239,NA19240 esv2750835 1 246589303 247124862 CNV gain Pinto_et_al_2007 17911159 SNP array essv6983006,essv6986320,essv6988613 M 771 3 0 LYPD8,MIR3124,OR14I1,OR2G6,OR2T1,OR2T10,OR2T11,OR2T2,OR2T27,OR2T29,OR2T3,OR2T34,OR2T35,OR2T4,OR2T5,OR2T6,SH3BP5L,ZNF672,ZNF692 BEC_533 nsv9125 1 246590118 246592654 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24274,nssv26167,nssv24580,nssv26384,nssv23986 M 31 5 0 OR2T4 NA07029,NA07048,NA12740,NA18504,NA18572 nsv945466 1 246591760 246593043 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831361,nssv1831395,nssv1831412,nssv1831367,nssv1831339,nssv1831426,nssv1831416,nssv1831370,nssv1831409,nssv1831397,nssv1830407,nssv1831388,nssv1831352,nssv1831403,nssv1831338,nssv1831366,nssv1830409,nssv1831378,nssv1831359,nssv1831419,nssv1831351,nssv1831368,nssv1831344,nssv1831369,nssv1831358,nssv1831382,nssv1831348,nssv1831380,nssv1831414,nssv1831364,nssv1831347,nssv1831385,nssv1831415,nssv1831371,nssv1831346,nssv1831373,nssv1831341,nssv1831374,nssv1831349,nssv1831355,nssv1831340,nssv1831383,nssv1831408,nssv1831402,nssv1831407,nssv1831377,nssv1831345,nssv1831398,nssv1831342,nssv1831391,nssv1831410,nssv1831386,nssv1831413,nssv1831422,nssv1831343,nssv1831405,nssv1831336,nssv1831387,nssv1830410,nssv1831363,nssv1831350,nssv1831396,nssv1830411,nssv1831389,nssv1831411,nssv1831424,nssv1831337,nssv1831399,nssv1830408,nssv1831423,nssv1831354,nssv1831393,nssv1830406,nssv1831376,nssv1831384,nssv1831421,nssv1831372,nssv1831400,nssv1831362,nssv1831365,nssv1831356,nssv1831381,nssv1831353,nssv1831401,nssv1831379,nssv1831418,nssv1831392,nssv1831420,nssv1831425,nssv1831417,nssv1831360,nssv1831404,nssv1831390,nssv1831394,nssv1831357,nssv1831406,nssv1831375 M 97 10 0 OR2T4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv511035 1 246598893 246646894 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv624367,nssv618638 M 4 0 0 OR2T1,OR2T6 CHM,NA18994 dgv2n35 1 246600723 246600723 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nsv473931,nsv473854 M 9 1 0 "" NA12156 nsv473962 1 246600726 246600726 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018767 M 9 1 0 "" NA12156 nsv479128 1 246600756 246600756 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012240 M 9 0 0 "" nsv549633 1 246604886 246614506 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739741 M 17421 0 1 "" esv2311706 1 246612815 246613457 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4863156 M 1 0 1 "" NA18507 nsv9136 1 246612827 246615355 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv26186,nssv21418,nssv22430,nssv25719,nssv26561,nssv26398,nssv24297,nssv28009,nssv23067,nssv24564,nssv26373,nssv23682,nssv24280 M 31 6 7 "" NA07029,NA07048,NA10863,NA12740,NA12872,NA18517,NA18563,NA18853,NA18860,NA18975,NA19007,NA19132,NA19144 esv2603087 1 246612863 246614859 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5331337 M 1 0 1 "" NA18507 esv22745 1 246612917 246614970 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10109,esv20123 M 40 1 6 "" NA11931,NA12239,NA12749,NA18858,NA18907,NA19147,NA19257 nsv820904 1 246612917 246614970 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421124 M 1 0 1 "" NA10851 dgv907n54 1 246613059 246614506 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549634,nsv549636,nsv549635 M 17421 0 18 "" esv1541894 1 246613154 246613222 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3774059 M 2 0 1 "" HuRef esv1018953 1 246613270 246614358 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3913046 M 2 0 1 "" HuRef esv1048994 1 246614567 246614567 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3969868 M 2 1 0 "" HuRef nsv5343 1 246622617 246646934 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6241,nssv11211,nssv5113,nssv3849 M 9 4 0 OR2T1 NA12156,NA12878,NA15510,NA19129 nsv509801 1 246624065 246624065 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621120 M 4 1 0 "" NA15510 nsv508724 1 246626181 246626181 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619838 M 4 1 0 "" NA10860 esv1010251 1 246632541 246634519 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565060 M 3 1 0 "" HuRef esv2614714 1 246633630 246634289 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5248678 M 1 1 0 "" NA18507 esv3344107 1 246634041 246634208 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652077 M 185 1 0 "" NA19240 esv1242261 1 246634150 246634150 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3621561 M 2 1 0 "" HuRef esv27081 1 246637784 246639336 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv21224 M 40 10 10 "" NA06985,NA07037,NA11894,NA11931,NA12156,NA12287,NA12749,NA12776,NA15510,NA18508,NA18511,NA18517,NA18858,NA18861,NA18907,NA18909,NA18916,NA19114,NA19240,NA19257 nsv820463 1 246637784 246639454 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421135 M 1 0 1 "" NA10851 nsv549637 1 246637798 246638006 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739760 M 17421 0 1 "" dgv336e59 1 246637952 246638950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3428223,esv3443765,esv3335592,esv3381007,esv3449395 M 185 5 0 "" NA12878,NA12891,NA19238,NA19239,NA19240 nsv1007621 1 246639447 246707803 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493634 M 29084 1 0 OR2T2,OR2T3 nsv947478 1 246639541 246700339 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761429 M 97 1 0 OR2T2 HGDP01029 nsv7193 1 246640772 246900013 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9433,nssv9432,nssv10620,nssv10617,nssv10616,nssv5122,nssv3850,nssv3853,nssv9748,nssv6250,nssv669,nssv5132 M 9 0 0 OR2G6,OR2T10,OR2T11,OR2T2,OR2T27,OR2T29,OR2T3,OR2T34,OR2T35,OR2T5 NA12156,NA12878,NA18507,NA18517,NA18956,NA19129,NA19240 dgv615n100 1 246662304 246780602 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001661,nsv1013521 M 29084 0 2 OR2G6,OR2T2,OR2T3,OR2T5 esv3393656 1 246666152 246668850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692221 M 185 1 0 "" NA12891 dgv616n100 1 246666908 246804058 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000763,nsv1006552 M 29084 2 0 OR2G6,OR2T2,OR2T29,OR2T3,OR2T34,OR2T5 nsv478077 1 246667274 246667274 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020403 M 9 1 0 "" NA18517 nsv479027 1 246667735 246667735 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020235 M 9 0 0 "" esv26090 1 246669851 246701820 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16230,esv12971,esv11832,esv20556,esv15910 M 40 6 4 OR2T2 NA12878,NA18505,NA18508,NA18517,NA18858,NA19108,NA19240,NA19257 nsv945468 1 246670778 246672083 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829146,nssv1829112,nssv1831432,nssv1829105,nssv1829082,nssv1829098,nssv1831433,nssv1829091,nssv1831428,nssv1829122,nssv1829145,nssv1829114,nssv1829140,nssv1829104,nssv1831445,nssv1829152,nssv1831431,nssv1829130,nssv1831436,nssv1829134,nssv1829092,nssv1829132,nssv1831444,nssv1829156,nssv1829089,nssv1829101,nssv1831441,nssv1829108,nssv1829143,nssv1829123,nssv1831438,nssv1829115,nssv1829142,nssv1829148,nssv1831446,nssv1829136,nssv1829139,nssv1829137,nssv1829141,nssv1829127,nssv1831440,nssv1829116,nssv1831442,nssv1829099,nssv1831437,nssv1829096,nssv1831439,nssv1829102,nssv1831430,nssv1829093,nssv1829081,nssv1829128,nssv1831435,nssv1829097,nssv1831429,nssv1829154,nssv1829083,nssv1829157,nssv1829085,nssv1829135,nssv1829138,nssv1829119,nssv1829090,nssv1829131,nssv1829144,nssv1829118,nssv1831443,nssv1829107,nssv1829147,nssv1829153,nssv1831434,nssv1831427,nssv1829133,nssv1829150,nssv1829113,nssv1829111,nssv1829086,nssv1829110,nssv1829120,nssv1829126,nssv1829087,nssv1829100,nssv1829109,nssv1829125,nssv1829084,nssv1829121,nssv1829129,nssv1829088,nssv1829094,nssv1829124,nssv1829117,nssv1829151,nssv1829155,nssv1829149,nssv1829103,nssv1829106,nssv1829095 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv479165 1 246671433 246671433 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012555 M 9 0 0 "" nsv479942 1 246671963 246671963 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016446 M 9 0 0 "" nsv1009036 1 246672363 246764002 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486872,nssv3495101 M 29084 1 1 OR2G6,OR2T2,OR2T3,OR2T5 esv2760083 1 246672375 246885106 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007173,essv7007048,essv7007092,essv7007069,essv7007061,essv7007088,essv7007110,essv7007102,essv7007112,essv7007086,essv7007047,essv7007053,essv7007182,essv7007179,essv7007160,essv7007074,essv7007152,essv7007154,essv7007139,essv7007082,essv7007075,essv7007093,essv7007057,essv7007127,essv7007060,essv7007096,essv7007052,essv7007157,essv7007129,essv7007145,essv7007146,essv7007130,essv7007099,essv7007076,essv7007107,essv7007151,essv7007143,essv7007072,essv7007106,essv7007091,essv7007164,essv7007084,essv7007183,essv7007104,essv7007116,essv7007040,essv7007170,essv7007080,essv7007090,essv7007178,essv7007079,essv7007132,essv7007054,essv7007184,essv7007070,essv7007142,essv7007095,essv7007103,essv7007138,essv7007050,essv7007149,essv7007171,essv7007135,essv7007117,essv7007128,essv7007137,essv7007108,essv7007071,essv7007118,essv7007087,essv7007165,essv7007131,essv7007097,essv7007167,essv7007161,essv7007121,essv7007113,essv7007098,essv7007150,essv7007134,essv7007119,essv7007159,essv7007046,essv7007126,essv7007153,essv7007176,essv7007059,essv7007073,essv7007158,essv7007043,essv7007045,essv7007101,essv7007141,essv7007156,essv7007140,essv7007114,essv7007068,essv7007049,essv7007174,essv7007062,essv7007125,essv7007109,essv7007136,essv7007051,essv7007169,essv7007162,essv7007094,essv7007124,essv7007172,essv7007120,essv7007058,essv7007105,essv7007123,essv7007042,essv7007041,essv7007168,essv7007064,essv7007065,essv7007056,essv7007181,essv7007063,essv7007148,essv7007147,essv7007175,essv7007163,essv7007085,essv7007039,essv7007081,essv7007067,essv7007083,essv7007115,essv7007180 M 1109 10 122 OR2G6,OR2T10,OR2T11,OR2T2,OR2T27,OR2T29,OR2T3,OR2T34,OR2T35,OR2T5 RW_0002,RW_0003,RW_0006,RW_0007,RW_0008,RW_0013,RW_0014,RW_0017,RW_0021,RW_0023,RW_0025,RW_0028,RW_0029,RW_0032,RW_0036,RW_0039,RW_0043,RW_0046,RW_0053,RW_0061,RW_0067,RW_0071,RW_0074,RW_0087,RW_0088,RW_0092,RW_0093,RW_0095,RW_0101,RW_0106,RW_0110,RW_0111,RW_0112,RW_0117,RW_0118,RW_0124,RW_0132,RW_0144,RW_0147,RW_0148,RW_0149,RW_0162,RW_0164,RW_0169,RW_0170,RW_0171,RW_0174,RW_0176,RW_0184,RW_0193,RW_0195,RW_0197,RW_0202,RW_0203,RW_0207,RW_0208,RW_0210,RW_0212,RW_0213,RW_0216,RW_0220,RW_0221,RW_0222,RW_0223,RW_0224,RW_0234,RW_0237,RW_0241,RW_0248,RW_0250,RW_0254,RW_0257,RW_0258,RW_0263,RW_0267,RW_0269,RW_0272,RW_0273,RW_0276,RW_0281,RW_0289,RW_0300,RW_0316,RW_0324,RW_0325,RW_0330,RW_0344,RW_0348,RW_0354,RW_0357,RW_0361,RW_0509,RW_0511,RW_0519,RW_0521,RW_0527,RW_0528,RW_0530,RW_0534,RW_0539,RW_0541,RW_0550,RW_0554,RW_0555,RW_0564,RW_0575,RW_0576,RW_0578,RW_0586,RW_0601,RW_0604,RW_0606,RW_0608,RW_0614,RW_0616,RW_0618,RW_0624,RW_0627,RW_0629,RW_0632,RW_0633,RW_0635,RW_0637,RW_0643,RW_0652,RW_0662,RW_0665,RW_0666 nsv9147 1 246673290 246677682 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv24570,nssv26546,nssv23992,nssv27503,nssv26402 M 31 0 5 "" NA07029,NA10839,NA12740,NA18537,NA19240 dgv337e59 1 246673352 246678050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3353554,esv3365726 M 185 2 0 "" NA12878,NA12891 nsv827809 1 246673553 246674153 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1438129 M 31 0 1 "" NA18547 nsv549638 1 246674129 246695962 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739764,nssv739761,nssv739763,nssv739762,nssv739765 M 17421 5 0 OR2T2 esv2179040 1 246676214 246676574 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4680924 M 1 0 1 "" NA18507 esv32670 1 246676880 246713386 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95664,essv94879,essv96839,essv93092,essv101067 M 51 2 3 OR2T2,OR2T3 21659,21693,21841,21863,22231 nsv945469 1 246677414 246678775 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829179,nssv1829829,nssv1829175,nssv1829821,nssv1829159,nssv1829824,nssv1829805,nssv1829811,nssv1829178,nssv1829822,nssv1829852,nssv1829827,nssv1829849,nssv1829804,nssv1829176,nssv1829832,nssv1829853,nssv1829835,nssv1829851,nssv1829836,nssv1829165,nssv1829841,nssv1829160,nssv1829808,nssv1829177,nssv1829810,nssv1829173,nssv1829833,nssv1829803,nssv1829809,nssv1829167,nssv1829830,nssv1829847,nssv1829815,nssv1829844,nssv1829158,nssv1829164,nssv1829799,nssv1829846,nssv1829840,nssv1829168,nssv1829813,nssv1829850,nssv1829826,nssv1829802,nssv1829797,nssv1829845,nssv1829817,nssv1829170,nssv1829825,nssv1829172,nssv1829814,nssv1829171,nssv1829801,nssv1829169,nssv1829831,nssv1829848,nssv1829837,nssv1829163,nssv1829820,nssv1829174,nssv1829806,nssv1829798,nssv1829828,nssv1829796,nssv1829842,nssv1829166,nssv1829823,nssv1829162,nssv1829812,nssv1829161,nssv1829800,nssv1829818,nssv1829807,nssv1829843,nssv1829834,nssv1829819,nssv1829838,nssv1829839,nssv1829816 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1001494 1 246679946 246755211 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500817 M 29084 1 0 OR2G6,OR2T2,OR2T3,OR2T5 dgv908n54 1 246680271 246695962 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549639,nsv549640 M 17421 5 0 OR2T2 nsv549641 1 246680271 246852068 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739771 M 17421 1 0 OR2G6,OR2T10,OR2T2,OR2T29,OR2T3,OR2T34,OR2T5 nsv945470 1 246682286 246684601 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829867,nssv1829914,nssv1829874,nssv1829912,nssv1829936,nssv1829921,nssv1829855,nssv1829899,nssv1829882,nssv1829945,nssv1829883,nssv1829926,nssv1829875,nssv1829898,nssv1829871,nssv1829918,nssv1829885,nssv1829854,nssv1829865,nssv1829901,nssv1829872,nssv1829902,nssv1829931,nssv1829904,nssv1829873,nssv1829884,nssv1829856,nssv1829907,nssv1829937,nssv1829941,nssv1829934,nssv1829949,nssv1829866,nssv1829925,nssv1829864,nssv1829891,nssv1829938,nssv1829890,nssv1829859,nssv1829905,nssv1829857,nssv1829920,nssv1829861,nssv1829919,nssv1829860,nssv1829895,nssv1829939,nssv1829888,nssv1829933,nssv1829928,nssv1829935,nssv1829910,nssv1829878,nssv1829915,nssv1829940,nssv1829879,nssv1829870,nssv1829889,nssv1829932,nssv1829893,nssv1829876,nssv1829944,nssv1829868,nssv1829906,nssv1829863,nssv1829930,nssv1829869,nssv1829924,nssv1829862,nssv1829894,nssv1829858,nssv1829950,nssv1829897,nssv1829927,nssv1829943,nssv1829942,nssv1829877,nssv1829881,nssv1829947,nssv1829880,nssv1829913,nssv1829946,nssv1829917,nssv1829929,nssv1829916,nssv1829909,nssv1829911,nssv1829922,nssv1829900,nssv1829903,nssv1829923,nssv1829948,nssv1829886,nssv1829908,nssv1829887,nssv1829892,nssv1829896 M 97 10 0 OR2T2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv9158 1 246682351 246686198 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26557,nssv28210,nssv24573 M 31 3 0 OR2T2 NA18502,NA18504,NA19221 esv3424893 1 246686752 246704350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692224 M 185 1 0 OR2T3 NA12878 esv3384361 1 246686852 246692250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692225 M 185 1 0 "" NA12892 nsv442630 1 246687782 246702344 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1619954,nssv1619974,nssv1620028,nssv1620014,nssv1620017,nssv1619960,nssv1620004,nssv1619955,nssv1619978,nssv1619988,nssv1619982,nssv1620007,nssv1620020,nssv1620015,nssv1619985,nssv1619986,nssv1619963,nssv1619964,nssv1619979,nssv1619975,nssv1620030,nssv1619991,nssv1619995,nssv1619968,nssv1620018,nssv1619972,nssv1620000,nssv1619980,nssv1619959,nssv1619984,nssv1619993,nssv1619971,nssv1620009,nssv1620011,nssv1619999,nssv1620002,nssv1620001,nssv1619957,nssv1620010,nssv1620019,nssv1620005,nssv1620023,nssv1619976,nssv1619965,nssv1620029,nssv1619966,nssv1619996,nssv1619997,nssv1619990,nssv1620026,nssv1619970,nssv1620006,nssv1620022,nssv1619989,nssv1620003,nssv1620024,nssv1620025,nssv1619961,nssv1619998,nssv1619983,nssv1619973,nssv1619992,nssv1619981,nssv1619977,nssv1619962,nssv1620013,nssv1619994,nssv1620016,nssv1620012,nssv1620008,nssv1620021,nssv1619987,nssv1619958,nssv1620027,nssv1619967,nssv1619953,nssv1619969,nssv1619956 M 270 78 0 "" NA06985,NA07000,NA10854,NA10859,NA10861,NA10863,NA11840,NA11881,NA11994,NA11995,NA12145,NA12234,NA12761,NA12801,NA12813,NA12878,NA12892,NA18504,NA18505,NA18508,NA18515,NA18516,NA18517,NA18550,NA18555,NA18558,NA18561,NA18570,NA18572,NA18573,NA18594,NA18605,NA18611,NA18622,NA18635,NA18852,NA18855,NA18856,NA18859,NA18871,NA18872,NA18948,NA18966,NA18967,NA18973,NA18976,NA18978,NA19000,NA19012,NA19099,NA19100,NA19101,NA19102,NA19116,NA19120,NA19127,NA19129,NA19130,NA19131,NA19137,NA19138,NA19142,NA19144,NA19152,NA19154,NA19159,NA19160,NA19161,NA19171,NA19193,NA19200,NA19201,NA19202,NA19206,NA19221,NA19222,NA19223,NA19240 dgv617n100 1 246687786 246835597 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002506,nsv1005161,nsv1005778,nsv998636,nsv1007877,nsv1003950,nsv1002022,nsv1012700 M 29084 12 0 OR2G6,OR2T10,OR2T29,OR2T3,OR2T34,OR2T5 esv3328416 1 246688352 246696850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692226 M 185 1 0 "" NA12891 esv3412122 1 246688852 246691250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692227 M 185 1 0 "" NA19239 nsv514922 1 246689344 246696480 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857310,nssv2857298,nssv2857303,nssv2857299,nssv2857309,nssv2857300,nssv2857319,nssv2856559,nssv2857323,nssv2856564,nssv2857307,nssv2857301,nssv2857311,nssv2856534,nssv2857316,nssv2857288,nssv2857325,nssv2857250,nssv2857302,nssv2856592,nssv2857321,nssv2856539,nssv2857314,nssv2856546,nssv2857315,nssv2856601,nssv2857324,nssv2856527,nssv2857313,nssv2857271,nssv2857308,nssv2856606,nssv2857306,nssv2857283,nssv2857317,nssv2856598,nssv2857320,nssv2857290,nssv2857312,nssv2856538,nssv2857305,nssv2856540,nssv2857318,nssv2856582,nssv2857304,nssv2857281,nssv2857322,nssv2856552,nssv2857267,nssv2857289,nssv2856591,nssv2856551,nssv2857270,nssv2856566,nssv2857279,nssv2856574,nssv2856587,nssv2857287,nssv2856583,nssv2857294,nssv2856610,nssv2856572,nssv2856541,nssv2856570,nssv2856525,nssv2856594,nssv2856531,nssv2857260,nssv2856555,nssv2856612,nssv2856584,nssv2856528,nssv2857277,nssv2856599,nssv2857252,nssv2857266,nssv2857255,nssv2856557,nssv2856562,nssv2856523,nssv2856537,nssv2857256,nssv2856536,nssv2856585,nssv2856604,nssv2857291,nssv2856597,nssv2856580,nssv2856577,nssv2856553,nssv2857264,nssv2856605,nssv2856608,nssv2856595,nssv2856589,nssv2857282,nssv2856558,nssv2856609,nssv2856581,nssv2856611,nssv2857286,nssv2857263,nssv2856588,nssv2857249,nssv2856590,nssv2856545,nssv2856556,nssv2857284,nssv2856575,nssv2856567,nssv2856526,nssv2856563,nssv2856529,nssv2856569,nssv2856544,nssv2857253,nssv2856549,nssv2857278,nssv2856603,nssv2856542,nssv2857258,nssv2856524,nssv2857272,nssv2856535,nssv2857262,nssv2857296,nssv2856554,nssv2856532,nssv2857268,nssv2856600,nssv2857297,nssv2857257,nssv2856568,nssv2856602,nssv2856573,nssv2856565,nssv2856593,nssv2857276,nssv2857295,nssv2857292,nssv2856550,nssv2856571,nssv2856576,nssv2857285,nssv2857269,nssv2857274,nssv2856561,nssv2857275,nssv2856586,nssv2856530,nssv2856543,nssv2856547,nssv2856548,nssv2857265,nssv2857254,nssv2857280,nssv2856596,nssv2857251,nssv2856579,nssv2857293,nssv2856578,nssv2857259,nssv2857273,nssv2857261,nssv2856607,nssv2856560,nssv2856533 M 2366 11 156 "" NA06986,NA06995,NA07014,NA07022,NA07056,NA07349,NA07435,NA10830,NA10831,NA10835,NA10837,NA10838,NA10843,NA10851,NA10855,NA10856,NA10857,NA11830,NA11839,NA11843,NA11894,NA11919,NA11992,NA11993,NA12004,NA12005,NA12144,NA12146,NA12154,NA12156,NA12248,NA12249,NA12273,NA12274,NA12287,NA12335,NA12336,NA12340,NA12344,NA12348,NA12375,NA12376,NA12383,NA12485,NA12489,NA12717,NA12718,NA12749,NA12753,NA12763,NA12776,NA12777,NA12802,NA12812,NA12814,NA12828,NA12832,NA12842,NA12843,NA12872,NA12875,NA12877,NA12878,NA12889,NA12890,NA18484,NA18485,NA18487,NA18489,NA18497,NA18501,NA18509,NA18511,NA18518,NA18547,NA18550,NA18576,NA18577,NA18592,NA18593,NA18609,NA18636,NA18637,NA18869,NA18870,NA18907,NA18910,NA18942,NA18953,NA18956,NA18959,NA18965,NA18968,NA18971,NA18972,NA18974,NA18994,NA19097,NA19101,NA19108,NA19109,NA19119,NA19132,NA19140,NA19143,NA19145,NA19148,NA19161,NA19172,NA19175,NA19177,NA19182,NA19184,NA19186,NA19189,NA19190,NA19192,NA19198,NA19199,NA19202,NA19210,NA19222,NA19224,NA19225,NA19237,NA19249,NA19252,NA19257,NA21301,NA21307,NA21310,NA21316,NA21344,NA21359,NA21362,NA21382,NA21384,NA21387,NA21403,NA21438,NA21439,NA21440,NA21441,NA21442,NA21454,NA21479,NA21486,NA21487,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21524,NA21526,NA21583,NA21600,NA21608,NA21615,NA21634,NA21648,NA21716,NA21717,NA21718 esv3342648 1 246698152 246702150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692228 M 185 1 0 "" NA12891 esv3325443 1 246699352 246702250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692229 M 185 1 0 "" NA19240 nsv9169 1 246700399 246703149 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28094,nssv24888,nssv28260,nssv26392,nssv26716 M 31 5 0 "" NA18502,NA18504,NA18517,NA18860,NA19221 esv3342851 1 246700952 246702150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692231 M 185 1 0 "" NA19239 nsv472848 1 246700978 246700978 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013223 M 9 1 0 "" NA18555 nsv945471 1 246703071 246704987 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830023,nssv1829998,nssv1829979,nssv1830020,nssv1829961,nssv1829984,nssv1829952,nssv1829993,nssv1829966,nssv1830005,nssv1829960,nssv1830011,nssv1829968,nssv1830015,nssv1830028,nssv1829951,nssv1829969,nssv1829981,nssv1830021,nssv1829995,nssv1830022,nssv1830013,nssv1829958,nssv1830016,nssv1830027,nssv1829988,nssv1829964,nssv1830018,nssv1829962,nssv1830009,nssv1829982,nssv1829999,nssv1829953,nssv1830004,nssv1829957,nssv1829985,nssv1830024,nssv1829987,nssv1829980,nssv1830007,nssv1830026,nssv1830012,nssv1830029,nssv1830001,nssv1830025,nssv1829974,nssv1829956,nssv1829986,nssv1829972,nssv1830003,nssv1829963,nssv1829997,nssv1830030,nssv1829992,nssv1829975,nssv1829976,nssv1829967,nssv1830017,nssv1829954,nssv1830010,nssv1829973,nssv1830006,nssv1829971,nssv1830002,nssv1829959,nssv1829990,nssv1829955,nssv1830008,nssv1829965,nssv1829991,nssv1829970,nssv1829989,nssv1829996,nssv1829978,nssv1829977,nssv1830014,nssv1830019,nssv1829994,nssv1830000,nssv1829983 M 97 10 0 OR2T3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv618n100 1 246705237 246863824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001986,nsv1001707,nsv1012049,nsv1007843,nsv1005386,nsv1013970 M 29084 0 7 OR2G6,OR2T10,OR2T11,OR2T29,OR2T34,OR2T5 nsv1010059 1 246705237 246891748 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491783 M 29084 0 1 OR2G6,OR2T10,OR2T11,OR2T27,OR2T29,OR2T34,OR2T35,OR2T5 nsv1003091 1 246705237 246933968 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488078 M 29084 1 0 OR14I1,OR2G6,OR2T10,OR2T11,OR2T27,OR2T29,OR2T34,OR2T35,OR2T5 esv3446472 1 246706252 246713450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692232 M 185 1 0 "" NA12878 nsv5354 1 246707294 246754694 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3852,nssv1824 M 9 0 2 OR2G6,OR2T5 NA12878,NA18555 nsv821623 1 246711567 246857031 CNV loss Sebat_et_al_2004 15273396 ROMA nssv1421235,nssv1421246 M 31 0 2 OR2G6,OR2T10,OR2T11,OR2T29,OR2T34,OR2T5 esv7998 1 246713051 246795030 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv30439 M 1 0 0 OR2G6,OR2T29,OR2T5 nsv945472 1 246718454 246720426 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830052,nssv1831031,nssv1831037,nssv1830069,nssv1831034,nssv1831030,nssv1830045,nssv1830099,nssv1830037,nssv1830061,nssv1830032,nssv1830071,nssv1831033,nssv1830057,nssv1830051,nssv1830070,nssv1831041,nssv1830063,nssv1830059,nssv1830103,nssv1831040,nssv1830073,nssv1830048,nssv1830085,nssv1830046,nssv1831049,nssv1831039,nssv1830100,nssv1831038,nssv1831047,nssv1830044,nssv1831046,nssv1830038,nssv1830095,nssv1830049,nssv1830068,nssv1830050,nssv1830089,nssv1830040,nssv1830093,nssv1830041,nssv1830067,nssv1831035,nssv1830081,nssv1830062,nssv1830064,nssv1831036,nssv1831051,nssv1830035,nssv1830092,nssv1830033,nssv1830031,nssv1830043,nssv1830091,nssv1830034,nssv1830102,nssv1831032,nssv1830080,nssv1830060,nssv1831050,nssv1830042,nssv1830078,nssv1830036,nssv1831043,nssv1830055,nssv1831042,nssv1830047,nssv1830076,nssv1830053,nssv1830098,nssv1830039,nssv1830075,nssv1830074,nssv1830096,nssv1830084,nssv1830087,nssv1831048,nssv1830079,nssv1830082,nssv1831029,nssv1830090,nssv1830083,nssv1830101,nssv1831045,nssv1830097,nssv1830065,nssv1830088,nssv1831028,nssv1830077,nssv1830072,nssv1830086,nssv1830056,nssv1830094,nssv1830066,nssv1830054,nssv1831044,nssv1830058 M 97 10 0 OR2T5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv499748 1 246726121 246780547 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585491 M 9 0 0 OR2G6 dgv619n100 1 246726795 246816171 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003406,nsv1007007 M 29084 2 0 OR2G6,OR2T29,OR2T34 nsv481113 1 246727295 246727295 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019589 M 9 0 0 "" esv3430287 1 246730352 246731250 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692233 M 185 1 0 "" NA19239 esv1764131 1 246733501 246734062 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3867958 M 2 0 0 "" HuRef esv1230002 1 246735283 246736959 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3873678 M 2 0 0 "" HuRef nsv508707 1 246740153 246767758 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617450,nssv622794,nssv620159 M 4 0 3 OR2G6 CHM,NA15510,NA18994 esv29469 1 246740573 246743243 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20904 M 40 1 0 "" NA19257 nsv498715 1 246740696 246749190 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585431 M 9 0 1 "" esv1392907 1 246749189 246758249 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4118790 M 2 0 0 OR2G6 HuRef dgv620n100 1 246750011 246863824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004141,nsv1011941,nsv1005556,nsv1005850,nsv1007110,nsv1004960,nsv1013827,nsv1012788,nsv1001321,nsv1009314,nsv1006457 M 29084 0 23 OR2G6,OR2T10,OR2T11,OR2T29,OR2T34 dgv621n100 1 246750011 246863824 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010385,nsv1003273 M 29084 2 10 OR2G6,OR2T10,OR2T11,OR2T29,OR2T34 dgv622n100 1 246750011 246900576 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000935,nsv1014036,nsv1005274,nsv997599,nsv998881,nsv1010498,nsv1005996,nsv1003041,nsv1001505,nsv1013189,nsv1007529 M 29084 0 23 OR2G6,OR2T10,OR2T11,OR2T27,OR2T29,OR2T34,OR2T35 esv2763780 1 246750023 246880703 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7006423,essv7007423,essv7006700,essv7007556,essv7007434,essv7006667,essv7006556,essv7007355,essv7007711,essv7007833,essv7006489,essv7007689,essv7006745,essv7006434,essv7007266,essv7006500,essv7007622,essv7007856,essv7007567,essv7007189,essv7007133,essv7007578,essv7006400,essv7006412,essv7006567,essv7007445,essv7007366,essv7007333,essv7007000,essv7006911,essv7006833,essv7006978,essv7007523,essv7007989,essv7007878,essv7007778,essv7007589,essv7006645,essv7007377,essv7006867,essv7007867,essv7007933,essv7006467,essv7006844,essv7006456,essv7007756,essv7007900,essv7007978,essv7007745,essv7006678,essv7007033,essv7006600,essv7007911,essv7006778,essv7007100,essv7007700,essv7007456,essv7006789,essv7006989,essv7007177,essv7007600,essv7006889,essv7006767,essv7007022,essv7006933,essv7007634,essv7006800,essv7007767,essv7007678,essv7007412,essv7007967,essv7007089,essv7007044,essv7007611,essv7006733,essv7007645,essv7007399,essv7006622,essv7006756,essv7006967,essv7006711,essv7007344,essv7007111,essv7007944,essv7007811,essv7007467,essv7006722,essv7007322,essv7006523,essv7007300,essv7007922,essv7006900,essv7007789,essv7007288,essv7007534,essv7007066,essv7007478,essv7006811,essv7006689,essv7007122,essv7006534,essv7007222,essv7006578,essv7006589,essv7007200,essv7007955,essv7007311,essv7007489,essv7007166,essv7006822,essv7006656,essv7007667,essv7007545,essv7006478,essv7006878,essv7007656,essv7007822,essv7007255,essv7007733,essv7007388,essv7007155,essv7007233,essv7007844,essv7006511,essv7007500,essv7007511,essv7006634,essv7006922,essv7007055,essv7007144,essv7006955,essv7007211,essv7007078,essv7007277,essv7006545,essv7007244,essv7006856,essv7007800,essv7006445,essv7006611,essv7007722,essv7007889,essv7007011,essv7006944 M 1109 0 144 OR2G6,OR2T10,OR2T11,OR2T27,OR2T29,OR2T34,OR2T35 SW_0005,SW_0071,SW_0077,SW_0085,SW_0113,SW_0119,SW_0165,SW_0170,SW_0171,SW_0172,SW_0173,SW_0176,SW_0186,SW_0200,SW_0214,SW_0255,SW_0295,SW_0311,SW_0524,SW_0538,SW_0577,SW_0578,SW_0585,SW_0607,SW_0625,SW_0626,SW_0651,SW_0659,SW_0674,SW_0677,SW_0715,SW_0757,SW_0759,SW_0762,SW_0775,SW_0785,SW_0786,SW_0789,SW_0800,SW_0801,SW_0813,SW_0815,SW_0820,SW_0857,SW_0862,SW_0887,SW_0889,SW_0891,SW_1004,SW_1009,SW_1021,SW_1027,SW_1029,SW_1031,SW_1033,SW_1034,SW_1039,SW_1045,SW_1049,SW_1064,SW_1071,SW_1074,SW_1076,SW_1078,SW_1079,SW_1080,SW_1097,SW_1101,SW_1102,SW_1113,SW_1116,SW_1126,SW_1129,SW_1142,SW_1153,SW_1168,SW_1176,SW_1182,SW_1189,SW_1190,SW_1192,SW_1193,SW_1194,SW_1196,SW_1197,SW_1202,SW_1206,SW_1228,SW_1233,SW_1235,SW_1236,SW_1245,SW_1246,SW_1249,SW_1264,SW_1272,SW_1274,SW_1279,SW_1285,SW_1287,SW_1288,SW_1290,SW_1295,SW_1304,SW_1313,SW_1314,SW_1324,SW_1326,SW_1327,SW_1334,SW_1335,SW_1337,SW_1342,SW_1349,SW_1366,SW_1375,SW_1379,SW_1381,SW_1389,SW_1391,SW_1393,SW_1395,SW_1396,SW_1400,SW_1408,SW_1409,SW_1427,SW_1429,SW_1430,SW_1438,SW_1439,SW_1440,SW_1446,SW_1448,SW_1463,SW_1465,SW_1467,SW_1471,SW_1475,SW_1477,SW_1481,SW_1503,SW_1511,SW_1551 nsv442997 1 246751571 246752521 CNV duplication Young_et_al_2008 18674749 MLPA,PCR,Sequencing nssv1671905 M 52 1 0 OR2G6 NA10471 dgv909n54 1 246755452 246861733 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549642,nsv549643 M 17421 0 2 OR2T10,OR2T11,OR2T29,OR2T34 nsv160296 1 246760996 246767346 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178874 M 24 "" esv27618 1 246764341 246767378 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16543 M 40 1 0 "" NA19257 nsv469750 1 246768569 246944046 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1676029,nssv1673288 M 265 0 2 OR14I1,OR2T10,OR2T11,OR2T27,OR2T29,OR2T34,OR2T35 nsv827820 1 246768818 246796807 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436399 M 31 1 0 OR2T29 NA18542 esv1417071 1 246773620 246774406 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3876802 M 2 0 0 "" HuRef dgv623n100 1 246776227 246863824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000764,nsv1002472,nsv1001308,nsv1002785,nsv1005827,nsv1004479,nsv1014476,nsv1002671,nsv997381,nsv1008739,nsv1009280,nsv997968,nsv997635,nsv1012706 M 29084 0 44 OR2T10,OR2T11,OR2T29,OR2T34 dgv624n100 1 246776227 246877269 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001031,nsv998547 M 29084 2 27 OR2T10,OR2T11,OR2T29,OR2T34,OR2T35 dgv625n100 1 246776227 246885094 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004902,nsv1001184 M 29084 3 0 OR2T10,OR2T11,OR2T27,OR2T29,OR2T34,OR2T35 dgv626n100 1 246776227 246894847 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998003,nsv1001525,nsv1011142,nsv1007220,nsv1005317,nsv1009519,nsv1012259,nsv1007219,nsv1007463,nsv998500,nsv1011323,nsv1008572,nsv1011938,nsv1011123,nsv1003816,nsv998404,nsv1007962,nsv1008607,nsv1001680,nsv1006755,nsv1013062,nsv1000754 M 29084 0 243 OR2T10,OR2T11,OR2T27,OR2T29,OR2T34,OR2T35 nsv5365 1 246782057 246865873 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3854 M 9 0 1 OR2T10,OR2T11,OR2T29,OR2T34 NA12878 nsv945473 1 246782239 246787372 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831061,nssv1831062,nssv1831054,nssv1831060,nssv1831058,nssv1831057,nssv1831059,nssv1831056,nssv1831052,nssv1831055,nssv1831053 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945474 1 246787372 246789326 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831066,nssv1831132,nssv1831064,nssv1828169,nssv1831080,nssv1831110,nssv1831074,nssv1831107,nssv1828166,nssv1831088,nssv1831084,nssv1831135,nssv1831077,nssv1828178,nssv1831073,nssv1831120,nssv1831085,nssv1831131,nssv1831075,nssv1828174,nssv1831078,nssv1831086,nssv1828160,nssv1828158,nssv1831072,nssv1831126,nssv1831065,nssv1831063,nssv1831082,nssv1831125,nssv1831094,nssv1831119,nssv1828162,nssv1831114,nssv1828167,nssv1831095,nssv1831081,nssv1831098,nssv1828164,nssv1831129,nssv1828161,nssv1831122,nssv1831076,nssv1831109,nssv1831092,nssv1831112,nssv1831068,nssv1831138,nssv1831069,nssv1831089,nssv1831083,nssv1831133,nssv1828165,nssv1831108,nssv1828159,nssv1831128,nssv1828163,nssv1831090,nssv1831070,nssv1831134,nssv1831091,nssv1831123,nssv1828168,nssv1831117,nssv1831087,nssv1831115,nssv1831067,nssv1831097,nssv1831079,nssv1831102,nssv1831071,nssv1831101,nssv1831127,nssv1831137,nssv1831093,nssv1831136,nssv1831121,nssv1831104,nssv1828170,nssv1831111,nssv1831124,nssv1828176,nssv1831096,nssv1828172,nssv1831103,nssv1831100,nssv1828177,nssv1831099,nssv1831130,nssv1831116,nssv1831105,nssv1831106,nssv1828175,nssv1828171,nssv1831118,nssv1831113,nssv1828173 M 97 10 0 OR2T29 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv627n100 1 246791845 246863824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010502,nsv1006491,nsv1012648,nsv1006927,nsv1011329 M 29084 0 40 OR2T10,OR2T11,OR2T34 nsv9180 1 246794049 246795985 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv23983,nssv26856,nssv25168,nssv28310,nssv26565,nssv24895 M 31 0 6 "" NA10863,NA18502,NA18504,NA18572,NA18860,NA19221 dgv116n67 1 246794322 246863301 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827853,nsv827831,nsv827842 M 31 0 3 OR2T10,OR2T11,OR2T34 AK12,AK6,NA18570 esv29940 1 246794522 246875051 CNV loss Wheeler_et_al_2008 18421352 Oligo aCGH,Sequencing essv84179 M 3 0 1 OR2T10,OR2T11,OR2T34,OR2T35 WATSON esv33052 1 246794551 246863305 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93225,essv96686,essv95002,essv99694,essv93083,essv92550,essv95772,essv99952,essv99368,essv95696,essv96014,essv95730,essv99356,essv94186,essv98260,essv101660,essv93665,essv94794,essv95080,essv93088,essv99019,essv98026 M 51 4 17 OR2T10,OR2T11,OR2T34 21721,21772,21791,21841,21863,21909,21911,21938,21972,22011,22086,22127,22170,22217,22231,22233,22259,22275,22335,22394 esv27363 1 246795729 246862141 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21013,esv16897,esv17617 M 40 0 16 OR2T10,OR2T11,OR2T34 NA06985,NA07045,NA11995,NA12878,NA18502,NA18505,NA18508,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19129,NA19240,NA19257 nsv549644 1 246798472 246823617 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739774 M 17421 0 1 OR2T10,OR2T34 dgv910n54 1 246798472 246843790 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549652,nsv549654,nsv549653,nsv549645 M 17421 0 4 OR2T10,OR2T34 dgv911n54 1 246798472 246861733 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549649,nsv549648,nsv549646,nsv549647 M 17421 0 4 OR2T10,OR2T11,OR2T34 nsv1008002 1 246798656 246841710 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494775 M 29084 0 1 OR2T10,OR2T34 dgv628n100 1 246798656 246863824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013399,nsv1013045,nsv1014016,nsv1009319,nsv1004465,nsv1006883,nsv1002028,nsv1000103,nsv998960,nsv1006354,nsv1000729,nsv999462,nsv1001528 M 29084 0 303 OR2T10,OR2T11,OR2T34 dgv629n100 1 246798656 246863824 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009414,nsv1011848 M 29084 3 56 OR2T10,OR2T11,OR2T34 dgv7e213 1 246798656 246863836 CNV loss Mokhtar_et_al_2014 24956385 SNP array esv3584615,esv3584616 M 34 0 5 OR2T10,OR2T11,OR2T34 B10,B4,KSF024,KSM006,OA059 nsv1003605 1 246798656 246950437 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486398 M 29084 1 0 OR14I1,OR2T10,OR2T11,OR2T27,OR2T34,OR2T35 dgv630n100 1 246804058 246885094 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000791,nsv1014775,nsv1003351,nsv1008666,nsv1007887,nsv1012045,nsv1010641,nsv1003709,nsv1003216,nsv1009114,nsv999299,nsv1005145 M 29084 16 834 OR2T10,OR2T11,OR2T27,OR2T34,OR2T35 dgv631n100 1 246804058 247190999 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998867,nsv1001011 M 29084 2 0 LYPD8,MIR3124,OR14I1,OR2T10,OR2T11,OR2T27,OR2T34,OR2T35,PGBD2,SH3BP5L,ZNF672,ZNF692 nsv9191 1 246804406 246862817 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv28360,nssv21778,nssv28144,nssv26724,nssv25175,nssv25707,nssv28409,nssv25448,nssv27020,nssv22108,nssv24277,nssv26575 M 31 1 9 OR2T10,OR2T11,OR2T34 NA10863,NA18502,NA18504,NA18517,NA18572,NA18860,NA19144,NA19221,NA19240 nsv5376 1 246805427 246838979 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8331 M 9 1 0 OR2T10 NA12156 dgv912n54 1 246806139 246820286 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549650,nsv549664,nsv549651 M 17421 0 3 "" dgv5n14 1 246806139 246859583 CNV loss Cooper_et_al_2008 18776910 SNP array nsv433196,nsv433195,nsv433193,nsv433511 M 9 0 4 OR2T10,OR2T11 NA12878,NA18555,NA19129,NA19240 dgv913n54 1 246806139 246861733 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549665,nsv549656,nsv549655,nsv549666,nsv549667,nsv549657,nsv549659,nsv549658,nsv549661,nsv549660 M 17421 0 53 OR2T10,OR2T11 esv2421359 1 246806139 246863836 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5055572,essv5140830,essv5058111,essv5044193,essv5089759,essv5005560,essv5059233,essv5153078,essv5020827,essv5053750,essv5115152,essv5022752,essv5091265,essv5131682,essv5127742,essv5156203,essv5030909,essv5047249,essv5125086,essv5042703,essv5062467,essv5117558,essv5086942,essv5004573,essv5048163,essv5040772,essv5003472,essv5123287,essv5032053,essv5011248,essv5020890,essv5038198,essv5136252,essv5090838,essv5085030,essv5133073,essv5090585,essv5136453,essv5064700,essv5079112,essv5063897,essv5058818,essv5055017,essv5097257,essv5110593,essv5024210,essv5074922,essv5131199,essv5093794,essv5039021,essv5048692,essv5107103,essv5159986,essv5113296,essv5121400,essv5066001,essv5045899,essv5150504,essv5013422,essv5087721,essv5107978,essv5088570,essv5146763,essv5107766,essv5019912,essv5041438,essv5003287,essv5159867,essv5106828,essv5019398,essv5007616,essv5136644,essv5081358,essv5098948,essv5120285,essv5079809,essv5033538,essv5023038,essv5020643,essv5154198,essv5060873,essv5068973,essv5096709,essv5128857,essv5074138,essv5137355,essv5138532,essv5069474,essv5119660,essv5120983,essv5018049,essv5091210,essv5087376,essv5012841,essv5135654,essv5101288,essv5160251,essv5145685,essv5122598,essv5065934,essv5130632,essv5050749,essv5087834,essv5092824,essv5022524,essv5018175,essv5053031,essv5062619,essv5035902,essv5081548,essv5033980,essv5157783,essv5022184,essv5031539,essv5019645,essv5120633,essv5078870,essv5103933,essv5064953,essv5021496,essv5130767,essv5065864,essv5139919,essv5066684,essv5095742,essv5041542,essv5041335,essv5040163,essv5107901,essv5064679,essv5026906,essv5146280,essv5157348,essv5088349,essv5128329,essv5154342,essv5048158,essv5123521,essv5155280,essv5153434,essv5075998,essv5041796,essv5075145,essv5005910,essv5126338,essv5121075,essv5055728,essv5151797,essv5107574,essv5120971,essv5022716,essv5051993,essv5145024,essv5129030,essv5022198,essv5048778,essv5088257,essv5033254,essv5033670,essv5136619,essv5075036,essv5055175,essv5004671,essv5101846,essv5077692,essv5147790,essv5018986,essv5024371,essv5061637,essv5037494,essv5052279,essv5102650,essv5115592,essv5043614,essv5083273,essv5131334,essv5023997,essv5015117,essv5120045,essv5096828,essv5006978,essv5078935,essv5065509,essv5161177,essv5140515,essv5014996,essv5065266,essv5030024,essv5025650,essv5016362,essv5157558,essv5160478,essv5036357,essv5080664,essv5129943,essv5026927,essv5116647,essv5139049,essv5125705,essv5101009,essv5037748,essv5081416,essv5092614,essv5109985,essv5105652,essv5038668,essv5055863,essv5027476,essv5123320,essv5019774,essv5090019,essv5029695,essv5141066,essv5037471,essv5028578,essv5154959,essv5068686,essv5042138,essv5017623,essv5075816,essv5058655,essv5132616,essv5117760,essv5045275,essv5026076,essv5007575,essv5077425,essv5027081,essv5147700,essv5057479,essv5074592,essv5025893,essv5160632,essv5016509,essv5161202,essv5118382,essv5038509,essv5079513,essv5112617,essv5153388,essv5145185,essv5037221,essv5068652,essv5004723,essv5006756,essv5001965,essv5039407,essv5143061,essv5128823,essv5003191,essv5052053,essv5003841,essv5044737,essv5073467,essv5063441,essv5106270,essv5137891,essv5006818,essv5160671,essv5030161,essv5092325,essv5007657,essv5035008,essv5161209,essv5013017,essv5120275,essv5147948,essv5065925,essv5017100,essv5106860,essv5151778,essv5060184,essv5007543,essv5077147,essv5097020,essv5013772,essv5094439,essv5139361,essv5030485,essv5115664,essv5089205,essv5120231,essv5003147,essv5125237,essv5104325,essv5033269,essv5091485,essv5114761,essv5023399,essv5030451,essv5126178,essv5142477,essv5096319,essv5090674,essv5123259,essv5098606,essv5012245,essv5107029,essv5122374,essv5105534,essv5030156,essv5074800,essv5034319,essv5082727,essv5079794,essv5003970,essv5062898,essv5100548,essv5083127,essv5062993,essv5009380,essv5144789,essv5061991,essv5023091,essv5053264,essv5077491,essv5136566,essv5109259,essv5048855,essv5074083,essv5013677,essv5058181,essv5130044,essv5082006,essv5119741,essv5059168,essv5007881,essv5129150,essv5099983,essv5089647,essv5091698,essv5153990,essv5132043,essv5022848,essv5131955,essv5143053,essv5006833,essv5036668,essv5105324,essv5022897,essv5119985,essv5132902,essv5144547,essv5037832,essv5024015,essv5094953,essv5133721,essv5151698,essv5110738,essv5078030,essv5134117,essv5091748,essv5145010,essv5140044,essv5020619,essv5005650,essv5108365,essv5085311,essv5066145,essv5154881,essv5035114,essv5084075,essv5120185,essv5158889,essv5049719,essv5093982,essv5069137,essv5032071,essv5021158,essv5069259,essv5160367,essv5126939,essv5154728,essv5019962,essv5152258,essv5002108,essv5037281,essv5084864,essv5067089,essv5050378,essv5039518,essv5140666,essv5128527,essv5076150,essv5091685,essv5091351,essv5142939,essv5070591,essv5130565,essv5074845,essv5086297,essv5108480,essv5019482,essv5002553,essv5135664,essv5058592,essv5021783,essv5030218,essv5072211,essv5044203,essv5076900,essv5011649,essv5093605,essv5115707,essv5132447,essv5082298,essv5134615,essv5100891,essv5109296,essv5120876,essv5016082,essv5114866,essv5097752,essv5148458,essv5123318,essv5145516,essv5118084,essv5078026,essv5038484,essv5151709 M 1184 0 420 OR2T10,OR2T11 NA06984,NA06985,NA07000,NA07031,NA07045,NA07357,NA10836,NA10845,NA10850,NA10852,NA10854,NA10859,NA10861,NA10863,NA11829,NA11840,NA11881,NA11891,NA11892,NA11917,NA11918,NA11930,NA11994,NA11995,NA12045,NA12145,NA12234,NA12275,NA12282,NA12286,NA12386,NA12399,NA12761,NA12766,NA12767,NA12775,NA12778,NA12801,NA12813,NA12817,NA12818,NA12827,NA12829,NA12830,NA12878,NA12891,NA12892,NA17966,NA17967,NA17972,NA17974,NA17975,NA17976,NA17977,NA17980,NA17983,NA17989,NA18107,NA18120,NA18127,NA18131,NA18134,NA18139,NA18141,NA18150,NA18151,NA18156,NA18157,NA18488,NA18498,NA18499,NA18504,NA18505,NA18508,NA18510,NA18515,NA18516,NA18517,NA18518,NA18519,NA18520,NA18534,NA18536,NA18550,NA18555,NA18558,NA18559,NA18561,NA18570,NA18572,NA18573,NA18594,NA18602,NA18605,NA18611,NA18622,NA18632,NA18635,NA18645,NA18670,NA18674,NA18682,NA18704,NA18745,NA18748,NA18852,NA18855,NA18857,NA18859,NA18860,NA18867,NA18868,NA18869,NA18871,NA18872,NA18873,NA18875,NA18909,NA18911,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18948,NA18957,NA18966,NA18967,NA18973,NA18976,NA18978,NA19000,NA19027,NA19028,NA19031,NA19035,NA19038,NA19041,NA19044,NA19046,NA19054,NA19060,NA19062,NA19066,NA19070,NA19085,NA19095,NA19099,NA19101,NA19102,NA19103,NA19107,NA19113,NA19115,NA19116,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19129,NA19130,NA19131,NA19137,NA19138,NA19139,NA19141,NA19142,NA19144,NA19149,NA19150,NA19151,NA19152,NA19154,NA19159,NA19160,NA19161,NA19171,NA19174,NA19178,NA19179,NA19180,NA19185,NA19193,NA19194,NA19197,NA19200,NA19201,NA19202,NA19206,NA19208,NA19213,NA19214,NA19215,NA19221,NA19222,NA19223,NA19226,NA19236,NA19239,NA19240,NA19247,NA19248,NA19249,NA19257,NA19258,NA19308,NA19313,NA19321,NA19327,NA19328,NA19334,NA19359,NA19371,NA19373,NA19374,NA19375,NA19380,NA19384,NA19394,NA19429,NA19434,NA19436,NA19437,NA19438,NA19439,NA19440,NA19445,NA19451,NA19452,NA19457,NA19462,NA19466,NA19467,NA19472,NA19625,NA19651,NA19652,NA19654,NA19656,NA19657,NA19660,NA19664,NA19665,NA19676,NA19677,NA19685,NA19686,NA19700,NA19701,NA19702,NA19704,NA19711,NA19712,NA19718,NA19720,NA19721,NA19725,NA19726,NA19727,NA19750,NA19756,NA19774,NA19788,NA19795,NA19796,NA19819,NA19828,NA19904,NA19909,NA19914,NA19915,NA19917,NA19919,NA20276,NA20281,NA20287,NA20288,NA20290,NA20291,NA20292,NA20294,NA20295,NA20297,NA20317,NA20322,NA20332,NA20333,NA20335,NA20340,NA20342,NA20343,NA20346,NA20347,NA20350,NA20357,NA20358,NA20359,NA20360,NA20363,NA20364,NA20515,NA20527,NA20528,NA20541,NA20581,NA20586,NA20756,NA20761,NA20774,NA20797,NA20806,NA20811,NA20813,NA20815,NA20818,NA20850,NA20854,NA20859,NA20862,NA20870,NA20871,NA20888,NA20890,NA20895,NA20896,NA20898,NA20904,NA21092,NA21100,NA21101,NA21104,NA21105,NA21109,NA21113,NA21115,NA21117,NA21141,NA21295,NA21300,NA21302,NA21303,NA21308,NA21312,NA21313,NA21317,NA21320,NA21336,NA21339,NA21352,NA21353,NA21356,NA21357,NA21360,NA21361,NA21363,NA21364,NA21365,NA21366,NA21367,NA21368,NA21378,NA21379,NA21381,NA21382,NA21383,NA21385,NA21386,NA21388,NA21389,NA21390,NA21399,NA21400,NA21401,NA21402,NA21404,NA21408,NA21414,NA21418,NA21421,NA21423,NA21424,NA21447,NA21455,NA21473,NA21476,NA21477,NA21478,NA21480,NA21509,NA21519,NA21521,NA21523,NA21525,NA21528,NA21574,NA21575,NA21576,NA21578,NA21582,NA21599,NA21601,NA21616,NA21619,NA21620,NA21650,NA21678,NA21682,NA21686,NA21693,NA21719,NA21722,NA21723,NA21733,NA21739,NA21784 dgv914n54 1 246806139 246882182 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549695,nsv549694,nsv549663,nsv549718,nsv549704,nsv549662,nsv549711,nsv549679,nsv549678 M 17421 0 44 OR2T10,OR2T11,OR2T27,OR2T35 nsv433194 1 246811393 246882182 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463075 M 9 0 1 OR2T10,OR2T11,OR2T27,OR2T35 NA18517 nsv471517 1 246812583 246861726 CNV loss Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547885,nssv547886 M 3 0 2 OR2T10,OR2T11 JDW,YH nsv549668 1 246812825 246826726 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv739855 M 17421 0 1 OR2T10 dgv915n54 1 246812825 246840809 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549712,nsv549696,nsv549669,nsv549681,nsv549680 M 17421 0 16 OR2T10 dgv916n54 1 246812825 246861733 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549673,nsv549672,nsv549671,nsv549670,nsv549677,nsv549674,nsv549676,nsv549675 M 17421 0 36 OR2T10,OR2T11 nsv1005629 1 246815805 246847118 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484073,nssv3497890,nssv3492535 M 29084 0 3 OR2T10 dgv632n100 1 246815805 246856990 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004091,nsv1008097,nsv1000667,nsv1011880,nsv1003951,nsv998834,nsv1000877,nsv999803,nsv1006700,nsv1005271,nsv1010547,nsv1011737,nsv1002733,nsv1000871 M 29084 0 190 OR2T10,OR2T11 dgv633n100 1 246815805 246863824 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002299,nsv1005394,nsv1012544,nsv1011584 M 29084 6 911 OR2T10,OR2T11 dgv634n100 1 246815805 246863824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000501,nsv1008841,nsv1015090,nsv1010925,nsv1004750,nsv999056,nsv1013802,nsv1008456,nsv1010857,nsv1005740,nsv1004512,nsv1012944,nsv1001112,nsv1000706 M 29084 0 105 OR2T10,OR2T11 dgv635n100 1 246815805 246880703 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009248,nsv1010035,nsv998342,nsv1007867,nsv997868,nsv1013857,nsv1008410,nsv1003586,nsv1007594,nsv1007075,nsv999467,nsv1011570 M 29084 0 25 OR2T10,OR2T11,OR2T27,OR2T35 dgv636n100 1 246815805 246894847 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1015053,nsv1012440,nsv999686,nsv999257 M 29084 4 46 OR2T10,OR2T11,OR2T27,OR2T35 dgv637n100 1 246815805 246911720 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013340,nsv1012686,nsv1007327,nsv1002144,nsv1008044 M 29084 0 7 OR14I1,OR2T10,OR2T11,OR2T27,OR2T35 dgv638n100 1 246815805 246933855 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011797,nsv1010139,nsv998782 M 29084 3 0 OR14I1,OR2T10,OR2T11,OR2T27,OR2T35 nsv442637 1 246815817 246863836 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1620100,nssv1620063,nssv1620035,nssv1620085,nssv1620122,nssv1620121,nssv1620076,nssv1620039,nssv1620109,nssv1620050,nssv1620118,nssv1620075,nssv1620096,nssv1620051,nssv1620081,nssv1620098,nssv1620033,nssv1620104,nssv1620082,nssv1620074,nssv1620103,nssv1620110,nssv1620114,nssv1620049,nssv1620047,nssv1620038,nssv1620037,nssv1620094,nssv1620060,nssv1620089,nssv1620032,nssv1620083,nssv1620111,nssv1620119,nssv1620062,nssv1620105,nssv1620108,nssv1620036,nssv1620120,nssv1620107,nssv1620068,nssv1620116,nssv1620041,nssv1620113,nssv1620061,nssv1620079,nssv1620052,nssv1620112,nssv1620123,nssv1620117,nssv1620058,nssv1620034,nssv1620056,nssv1620084,nssv1620087,nssv1620057,nssv1620070,nssv1620086,nssv1620080,nssv1620069,nssv1620093,nssv1620091,nssv1620043,nssv1620053,nssv1620040,nssv1620072,nssv1620097,nssv1620102,nssv1620042,nssv1620046,nssv1620055,nssv1620090,nssv1620059,nssv1620099,nssv1620066,nssv1620031,nssv1620101,nssv1620065,nssv1620064,nssv1620073,nssv1620088,nssv1620071,nssv1620054,nssv1620045,nssv1620106,nssv1620115,nssv1620067,nssv1620092,nssv1620095,nssv1620048,nssv1620077,nssv1620044,nssv1620078 M 270 0 93 OR2T10,OR2T11 NA06985,NA07000,NA07357,NA10854,NA10859,NA10861,NA10863,NA11829,NA11840,NA11881,NA11994,NA11995,NA12145,NA12234,NA12761,NA12801,NA12813,NA12878,NA12891,NA12892,NA18504,NA18505,NA18508,NA18515,NA18516,NA18517,NA18522,NA18523,NA18550,NA18555,NA18558,NA18561,NA18570,NA18572,NA18573,NA18594,NA18605,NA18611,NA18622,NA18632,NA18635,NA18852,NA18855,NA18856,NA18857,NA18859,NA18860,NA18871,NA18872,NA18948,NA18966,NA18967,NA18973,NA18976,NA18978,NA19000,NA19012,NA19099,NA19100,NA19101,NA19102,NA19103,NA19116,NA19119,NA19120,NA19127,NA19129,NA19130,NA19131,NA19137,NA19138,NA19139,NA19141,NA19142,NA19144,NA19152,NA19154,NA19159,NA19160,NA19161,NA19171,NA19193,NA19194,NA19200,NA19201,NA19202,NA19206,NA19208,NA19221,NA19222,NA19223,NA19239,NA19240 dgv917n54 1 246816829 246850868 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549698,nsv549715,nsv549697,nsv549719,nsv549699,nsv549683,nsv549705,nsv549706,nsv549682,nsv549707,nsv549685,nsv549684 M 17421 0 29 OR2T10 dgv918n54 1 246816829 246868624 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549717,nsv549693,nsv549692,nsv549690,nsv549689,nsv549691,nsv549716,nsv549714,nsv549713,nsv549700,nsv549703,nsv549688,nsv549702,nsv549701,nsv549710,nsv549708,nsv549687,nsv549709,nsv549686 M 17421 0 74 OR2T10,OR2T11,OR2T35 nsv945695 1 246820238 246862232 OTHER complex Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2760961,nssv2762341,nssv2765955,nssv2763564 M 97 1 2 OR2T10,OR2T11 HGDP00456,HGDP00927,HGDP01284 nsv827864 1 246820269 246862122 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1438635 M 31 0 1 OR2T10,OR2T11 NA18973 nsv514048 1 246820608 246862080 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857522,nssv2857499,nssv2857560,nssv2857438,nssv2857529,nssv2857427,nssv2857527,nssv2857494,nssv2857558,nssv2857424,nssv2857601,nssv2857425,nssv2857544,nssv2857473,nssv2857599,nssv2857450,nssv2857594,nssv2857464,nssv2857534,nssv2857432,nssv2857602,nssv2857483,nssv2857574,nssv2857462,nssv2857552,nssv2857474,nssv2857595,nssv2857437,nssv2857579,nssv2857420,nssv2857578,nssv2857429,nssv2857577,nssv2857422,nssv2857539,nssv2857430,nssv2857523,nssv2857486,nssv2857557,nssv2857449,nssv2857541,nssv2857451,nssv2857589,nssv2857488,nssv2857555,nssv2857447,nssv2857569,nssv2857469,nssv2857604,nssv2857421,nssv2857537,nssv2857453,nssv2857554,nssv2857476,nssv2857565,nssv2857435,nssv2857567,nssv2857448,nssv2857510,nssv2857496,nssv2857515,nssv2857485,nssv2857546,nssv2857440,nssv2857508,nssv2857470,nssv2857533,nssv2857434,nssv2857561,nssv2857481,nssv2857587,nssv2857498,nssv2857525,nssv2857482,nssv2857548,nssv2857484,nssv2857551,nssv2857475,nssv2857536,nssv2857423,nssv2857586,nssv2857457,nssv2857598,nssv2857480,nssv2857606,nssv2857442,nssv2857588,nssv2857452,nssv2857507,nssv2857478,nssv2857518,nssv2857489,nssv2857516,nssv2857492,nssv2857519,nssv2857463,nssv2857520,nssv2857431,nssv2857607,nssv2857490,nssv2857521,nssv2857495,nssv2857581,nssv2857441,nssv2857605,nssv2857491,nssv2857553,nssv2857461,nssv2857580,nssv2857497,nssv2857531,nssv2857439,nssv2857530,nssv2857443,nssv2857514,nssv2857479,nssv2857590,nssv2857477,nssv2857563,nssv2857466,nssv2857559,nssv2857472,nssv2857600,nssv2857459,nssv2857504,nssv2857458,nssv2857505,nssv2857446,nssv2857545,nssv2857444,nssv2857513,nssv2857460,nssv2857538,nssv2857467,nssv2857608,nssv2857445,nssv2857572,nssv2857426,nssv2857532,nssv2857487,nssv2857500,nssv2857465,nssv2857564,nssv2857436,nssv2857566,nssv2857419,nssv2857540,nssv2857428,nssv2857526,nssv2857471,nssv2857570,nssv2857433,nssv2857549,nssv2857454,nssv2857506,nssv2857455,nssv2857575,nssv2857468,nssv2857517,nssv2857493,nssv2857547,nssv2857456,nssv2857509,nssv2857597,nssv2857603,nssv2857524,nssv2857592,nssv2857593,nssv2857591,nssv2857576,nssv2857556,nssv2857543,nssv2857512,nssv2857585,nssv2857502,nssv2857562,nssv2857571,nssv2857582,nssv2857573,nssv2857511,nssv2857596,nssv2857584,nssv2857550,nssv2857542,nssv2857535,nssv2857503,nssv2857583,nssv2857501,nssv2857568,nssv2857528 M 2366 0 190 OR2T10,OR2T11 NA06984,NA06985,NA07000,NA07031,NA07357,NA10836,NA10845,NA10850,NA10852,NA10859,NA10863,NA11829,NA11840,NA11881,NA11892,NA11917,NA11918,NA11930,NA11994,NA11995,NA12045,NA12145,NA12234,NA12275,NA12282,NA12286,NA12329,NA12386,NA12399,NA12761,NA12766,NA12767,NA12775,NA12778,NA12801,NA12813,NA12817,NA12818,NA12827,NA12829,NA12830,NA12878,NA12891,NA12892,NA18488,NA18498,NA18499,NA18504,NA18508,NA18510,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18550,NA18555,NA18558,NA18570,NA18572,NA18573,NA18594,NA18605,NA18611,NA18622,NA18632,NA18635,NA18852,NA18855,NA18856,NA18857,NA18859,NA18860,NA18867,NA18868,NA18869,NA18871,NA18872,NA18873,NA18875,NA18909,NA18911,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18948,NA18966,NA18967,NA18973,NA18978,NA19000,NA19012,NA19095,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19113,NA19115,NA19116,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19129,NA19130,NA19131,NA19137,NA19138,NA19141,NA19142,NA19144,NA19149,NA19150,NA19151,NA19152,NA19154,NA19159,NA19160,NA19161,NA19171,NA19174,NA19178,NA19179,NA19180,NA19185,NA19193,NA19194,NA19197,NA19200,NA19201,NA19202,NA19206,NA19208,NA19214,NA19221,NA19222,NA19223,NA19236,NA19239,NA19240,NA19247,NA19248,NA19249,NA19257,NA19258,NA21302,NA21303,NA21312,NA21313,NA21317,NA21360,NA21361,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21386,NA21388,NA21389,NA21390,NA21399,NA21400,NA21401,NA21404,NA21423,NA21447,NA21455,NA21476,NA21477,NA21478,NA21480,NA21523,NA21525,NA21581,NA21599,NA21601,NA21686 dgv639n100 1 246823369 246885094 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010351,nsv998421 M 29084 2 0 OR2T10,OR2T11,OR2T27,OR2T35 dgv919n54 1 246826726 246861733 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549722,nsv549720,nsv549721,nsv549723,nsv549724 M 17421 0 6 OR2T11 nsv827875 1 246828720 246840369 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1438636 M 31 0 1 "" NA18973 dgv920n54 1 246828735 246882182 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549736,nsv549734,nsv549729,nsv549725,nsv549728 M 17421 0 7 OR2T11,OR2T27,OR2T35 dgv640n100 1 246829539 246863824 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998878,nsv998057,nsv1008897 M 29084 0 10 OR2T11 dgv641n100 1 246835296 246877269 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003662,nsv1004517 M 29084 0 2 OR2T11,OR2T35 dgv921n54 1 246836858 246861733 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549733,nsv549727,nsv549726,nsv549731,nsv549732 M 17421 0 13 OR2T11 nsv549730 1 246837884 246852068 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740102,nssv740101,nssv740060,nssv740073,nssv740056,nssv740059,nssv740055,nssv740057,nssv740058,nssv740062,nssv740072,nssv740061,nssv740071,nssv740065,nssv740064,nssv740063,nssv740067,nssv740066,nssv740070,nssv740069,nssv740068,nssv740086,nssv740100,nssv740077,nssv740076,nssv740075,nssv740074,nssv740085,nssv740079,nssv740078,nssv740084,nssv740083,nssv740082,nssv740081,nssv740080,nssv740099,nssv740088,nssv740095,nssv740087,nssv740094,nssv740089,nssv740090,nssv740093,nssv740092,nssv740091,nssv740098,nssv740097,nssv740096,nssv740103,nssv740107,nssv740104,nssv740105,nssv740106,nssv740108 M 17421 0 54 "" esv3891426 1 246837884 246882811 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25801143 M 3017 0 1 OR2T11,OR2T27,OR2T35 nsv549735 1 246837884 246904955 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740119,nssv740118 M 17421 0 2 OR2T11,OR2T27,OR2T35 nsv549737 1 246843790 246861733 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740121 M 17421 0 1 OR2T11 dgv922n54 1 246846564 246859583 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549738,nsv549739 M 17421 0 2 OR2T11 nsv442999 1 246856102 246857052 CNV deletion Young_et_al_2008 18674749 MLPA,PCR,Sequencing nssv1671904,nssv1671912,nssv1671907,nssv1671908,nssv1671914,nssv1671911,nssv1671906,nssv1671909 M 52 0 8 OR2T11 NA00946,NA01814,NA10492,NA10975,NA11376,NA11524,NA14492,NA17034 nsv471355 1 246856102 246857052 CNV loss Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548059,nssv548058 M 3 0 2 OR2T11 JDW,YH nsv9202 1 246865706 246869552 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv25952,nssv28449,nssv27150 M 31 3 0 OR2T35 NA18502,NA18504,NA19221 nsv945477 1 246866995 246869035 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829211,nssv1829188,nssv1828243,nssv1828255,nssv1829210,nssv1828250,nssv1829261,nssv1829195,nssv1829201,nssv1829251,nssv1829226,nssv1829184,nssv1829232,nssv1828246,nssv1829207,nssv1828245,nssv1829206,nssv1829186,nssv1829218,nssv1829182,nssv1829204,nssv1829180,nssv1829215,nssv1829198,nssv1829260,nssv1829245,nssv1829257,nssv1829247,nssv1829228,nssv1829244,nssv1829214,nssv1829185,nssv1829255,nssv1828244,nssv1829258,nssv1829187,nssv1829205,nssv1829249,nssv1829220,nssv1829181,nssv1829236,nssv1828253,nssv1829254,nssv1828248,nssv1829238,nssv1829189,nssv1829208,nssv1829248,nssv1829197,nssv1829246,nssv1829202,nssv1828249,nssv1829243,nssv1829191,nssv1829216,nssv1828254,nssv1829233,nssv1828247,nssv1829262,nssv1829183,nssv1829237,nssv1828251,nssv1829192,nssv1829253,nssv1829241,nssv1828252,nssv1829225,nssv1829250,nssv1829222,nssv1829196,nssv1829234,nssv1829252,nssv1829212,nssv1829240,nssv1829203,nssv1829227,nssv1829213,nssv1829224,nssv1829231,nssv1829263,nssv1829221,nssv1829239,nssv1829217,nssv1829229,nssv1829190,nssv1829193,nssv1829259,nssv1829209,nssv1829235,nssv1829242,nssv1829256,nssv1829230,nssv1829199,nssv1829200,nssv1829223,nssv1829219,nssv1829194 M 97 10 0 OR2T35 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945479 1 246874214 246874714 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829334,nssv1829306,nssv1829265,nssv1829326,nssv1829285,nssv1829291,nssv1829266,nssv1829333,nssv1829281,nssv1829324,nssv1829277,nssv1829323,nssv1829336,nssv1829313,nssv1829282,nssv1829303,nssv1829343,nssv1829329,nssv1829341,nssv1829308,nssv1829271,nssv1829316,nssv1829279,nssv1829320,nssv1829274,nssv1829301,nssv1829293,nssv1829315,nssv1829273,nssv1829298,nssv1829283,nssv1829304,nssv1829267,nssv1829312,nssv1829342,nssv1829299,nssv1829278,nssv1829325,nssv1829337,nssv1829328,nssv1829284,nssv1829264,nssv1829270,nssv1829294,nssv1829276,nssv1829297,nssv1829295,nssv1829307,nssv1829338,nssv1829318,nssv1829288,nssv1829296,nssv1829286,nssv1829327,nssv1829269,nssv1829305,nssv1829335,nssv1829317,nssv1829280,nssv1829331,nssv1829292,nssv1829311,nssv1829268,nssv1829309,nssv1829272,nssv1829302,nssv1829339,nssv1829322,nssv1829340,nssv1829290,nssv1829275,nssv1829330,nssv1829321,nssv1829300,nssv1829319,nssv1829310,nssv1829289,nssv1829332,nssv1829314,nssv1829287 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv9214 1 246874227 246878610 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26864 M 31 1 0 "" NA18860 esv22401 1 246874945 246875514 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13242 M 40 4 0 "" NA18858,NA18861,NA18909,NA19240 nsv820323 1 246874945 246875514 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1421146 M 1 0 1 "" NA10851 dgv642n100 1 246875180 246950437 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010423,nsv1013178,nsv1006604,nsv1013014,nsv1005318 M 29084 5 0 OR14I1,OR2T27 nsv945480 1 246879852 246881062 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829426,nssv1829384,nssv1829359,nssv1829396,nssv1829346,nssv1829404,nssv1829345,nssv1829417,nssv1829365,nssv1829371,nssv1829357,nssv1829436,nssv1829373,nssv1829387,nssv1829361,nssv1829370,nssv1829429,nssv1829407,nssv1829428,nssv1829412,nssv1829360,nssv1829376,nssv1829423,nssv1829433,nssv1829347,nssv1829393,nssv1829362,nssv1829389,nssv1829350,nssv1829388,nssv1829363,nssv1829408,nssv1829424,nssv1829403,nssv1829430,nssv1829432,nssv1829355,nssv1829394,nssv1829421,nssv1829392,nssv1829422,nssv1829377,nssv1829364,nssv1829438,nssv1829353,nssv1829409,nssv1829425,nssv1829386,nssv1829358,nssv1829381,nssv1829375,nssv1829395,nssv1829351,nssv1829398,nssv1829349,nssv1829383,nssv1829372,nssv1829390,nssv1829368,nssv1829382,nssv1829366,nssv1829344,nssv1829352,nssv1829434,nssv1829356,nssv1829401,nssv1829348,nssv1829413,nssv1829427,nssv1829419,nssv1829354,nssv1829378,nssv1829431,nssv1829374,nssv1829406,nssv1829385,nssv1829402,nssv1829411,nssv1829405,nssv1829435,nssv1829416,nssv1829397,nssv1829391,nssv1829379,nssv1829367,nssv1829415,nssv1829400,nssv1829414,nssv1829418,nssv1829437,nssv1829439,nssv1829410,nssv1829399,nssv1829380,nssv1829440,nssv1829369,nssv1829420 M 97 10 0 OR2T27 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv643n100 1 246880703 246933855 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007698,nsv1011254 M 29084 2 0 OR14I1,OR2T27 nsv9225 1 246882799 246884393 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28194 M 31 1 0 "" NA18517 nsv549740 1 246901621 246935401 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740124 M 17421 0 1 OR14I1 nsv5387 1 246904382 246948743 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv679 M 9 0 1 OR14I1 NA19240 esv26076 1 246904732 246906033 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14491 M 40 1 0 "" NA12776 esv2392915 1 246904771 246905133 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4586497 M 1 0 1 "" NA18507 esv5310 1 246906146 246907648 CNV loss Wang_et_al_2008 18987735 Sequencing essv27751 M 1 0 1 "" YH esv32631 1 246909448 246912408 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv97177 M 51 0 1 OR14I1 22075 nsv477234 1 246916110 246916110 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017086 M 9 1 0 "" NA18517 nsv481109 1 246918145 246918145 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016843 M 9 0 0 "" nsv480493 1 246923161 246923161 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012102 M 9 0 0 "" nsv475635 1 246923490 246923490 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017772 M 9 1 0 "" NA12878 nsv475652 1 246923505 246923505 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013828 M 9 1 0 "" NA12878 nsv480874 1 246924180 246924180 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014686 M 9 0 0 "" nsv549741 1 246924302 246935401 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174091 M 17421 0 1 "" HGDP01412 nsv433522 1 246924302 246941808 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463403 M 9 0 1 "" NA19240 nsv549742 1 246924302 246941980 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740125 M 17421 0 1 "" nsv480472 1 246929697 246929697 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014006 M 9 0 0 "" nsv9236 1 246931629 246941926 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv27028,nssv27846,nssv27280,nssv28244,nssv26734 M 31 0 5 "" NA18504,NA18517,NA18860,NA19173,NA19240 nsv481008 1 246931718 246931718 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018822 M 9 0 0 "" nsv479180 1 246932401 246932401 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012350 M 9 0 0 "" esv22304 1 246932508 246942695 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17440,esv11130 M 40 0 11 "" NA18508,NA18517,NA18523,NA18858,NA18861,NA18909,NA18916,NA19114,NA19190,NA19240,NA19257 esv2421720 1 246933526 246942931 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5089239,essv5088740,essv5043214,essv5012882,essv5159290,essv5120914,essv5052382,essv5018226,essv5003436,essv5018656,essv5154141,essv5155232,essv5157495,essv5018665,essv5028750,essv5073406,essv5096610,essv5105490,essv5010780,essv5075102,essv5154691,essv5058927,essv5013518,essv5117896,essv5130235,essv5077305,essv5129566,essv5039601,essv5112489,essv5077518,essv5088023,essv5038633,essv5118199,essv5104044,essv5116293,essv5099408,essv5072804,essv5060119,essv5137967,essv5102179,essv5111117,essv5060065,essv5057002,essv5155996,essv5046566,essv5077067,essv5103246,essv5052883,essv5042064,essv5064462,essv5117625,essv5054699,essv5028352,essv5114922,essv5129189,essv5080560,essv5030587,essv5134231,essv5119661,essv5019786,essv5040047,essv5147682,essv5041838,essv5144898,essv5113725,essv5141331,essv5139179,essv5134492,essv5138504,essv5021999,essv5027464,essv5012794,essv5123305,essv5125467,essv5145513,essv5144581,essv5147149,essv5056350,essv5076526,essv5026169,essv5131644,essv5079172,essv5020032,essv5108083,essv5146713,essv5135176,essv5004108,essv5132816,essv5042009,essv5088796,essv5118586,essv5097673,essv5048611,essv5062703,essv5111359,essv5044086,essv5110280,essv5152817,essv5007570,essv5134856,essv5101342,essv5158949,essv5114056,essv5083785,essv5040561,essv5101079,essv5038692,essv5032987,essv5057505,essv5066902,essv5056247,essv5020677,essv5064567,essv5014576,essv5100626,essv5131014,essv5082184,essv5024773,essv5062116,essv5141911,essv5037036,essv5117117,essv5143787,essv5114005,essv5014235,essv5033785,essv5098944,essv5145274,essv5087896,essv5131330,essv5124996,essv5142931,essv5070253,essv5159919,essv5047960,essv5029228,essv5039750,essv5039317,essv5061500,essv5072660,essv5026810,essv5097458,essv5150551,essv5015773,essv5138389,essv5150577,essv5086739,essv5007148,essv5159464,essv5035036,essv5039006,essv5041644,essv5096363,essv5125839,essv5053218,essv5158837,essv5120693,essv5119451,essv5159605,essv5055910,essv5124523,essv5078020,essv5154049,essv5087796,essv5096336,essv5014812,essv5052773,essv5120363,essv5010633,essv5052606,essv5065546,essv5072619,essv5121226,essv5011937,essv5127349,essv5052271,essv5096383,essv5124092,essv5099066,essv5098740,essv5161028,essv5096746,essv5096138,essv5007999,essv5026206,essv5030057,essv5065125,essv5151263,essv5040837,essv5051141,essv5044097,essv5056786,essv5019438,essv5005757,essv5076378,essv5016159,essv5062033,essv5050684,essv5131898,essv5088239,essv5018777,essv5089720,essv5021265,essv5159524,essv5141907,essv5032022,essv5094972,essv5062060,essv5145596,essv5027538,essv5052364,essv5060433,essv5060939,essv5099426,essv5133322,essv5026493,essv5145173,essv5058098,essv5150782,essv5085457,essv5105150,essv5050478,essv5136552,essv5140090,essv5041225,essv5150244,essv5018039,essv5024929,essv5116215,essv5031233,essv5098902,essv5054118,essv5075551,essv5006248,essv5115198,essv5114708,essv5087662,essv5123172,essv5138181,essv5102478,essv5097840 M 1184 0 241 "" NA18484,NA18486,NA18488,NA18497,NA18498,NA18499,NA18503,NA18504,NA18508,NA18515,NA18516,NA18517,NA18518,NA18852,NA18854,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18871,NA18872,NA18909,NA18910,NA18911,NA18912,NA18913,NA18914,NA18917,NA18923,NA18933,NA18934,NA18935,NA19031,NA19035,NA19038,NA19046,NA19093,NA19094,NA19095,NA19096,NA19097,NA19101,NA19102,NA19103,NA19114,NA19115,NA19116,NA19117,NA19119,NA19120,NA19122,NA19128,NA19131,NA19137,NA19138,NA19139,NA19141,NA19142,NA19143,NA19146,NA19148,NA19149,NA19151,NA19152,NA19154,NA19159,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19176,NA19179,NA19180,NA19184,NA19186,NA19190,NA19193,NA19194,NA19200,NA19202,NA19203,NA19209,NA19211,NA19226,NA19236,NA19237,NA19238,NA19239,NA19240,NA19257,NA19258,NA19308,NA19311,NA19317,NA19324,NA19327,NA19328,NA19332,NA19371,NA19372,NA19373,NA19374,NA19375,NA19380,NA19382,NA19383,NA19385,NA19390,NA19394,NA19399,NA19403,NA19429,NA19434,NA19436,NA19438,NA19439,NA19440,NA19445,NA19446,NA19449,NA19451,NA19452,NA19457,NA19462,NA19466,NA19467,NA19469,NA19472,NA19474,NA19654,NA19656,NA19700,NA19702,NA19704,NA19705,NA19711,NA19712,NA19788,NA19818,NA19828,NA19834,NA19835,NA19836,NA19901,NA19902,NA19909,NA19919,NA20126,NA20128,NA20276,NA20277,NA20281,NA20289,NA20290,NA20291,NA20294,NA20295,NA20297,NA20301,NA20317,NA20322,NA20332,NA20335,NA20341,NA20343,NA20346,NA20347,NA20350,NA20357,NA20358,NA20359,NA20360,NA20363,NA20364,NA21295,NA21307,NA21308,NA21309,NA21317,NA21336,NA21339,NA21352,NA21353,NA21357,NA21378,NA21379,NA21382,NA21383,NA21384,NA21385,NA21386,NA21388,NA21391,NA21399,NA21401,NA21402,NA21405,NA21414,NA21421,NA21436,NA21448,NA21453,NA21454,NA21455,NA21457,NA21473,NA21476,NA21477,NA21478,NA21480,NA21493,NA21509,NA21510,NA21520,NA21528,NA21574,NA21575,NA21576,NA21580,NA21582,NA21597,NA21614,NA21619,NA21648,NA21650,NA21678,NA21683,NA21686,NA21723,NA21739,NA21768,NA21776,NA21784,NA21825 nsv498716 1 246933810 246942717 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585432 M 9 0 1 "" nsv442640 1 246933867 246939281 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1620175,nssv1620125,nssv1620124,nssv1620127,nssv1620148,nssv1620135,nssv1620152,nssv1620151,nssv1620153,nssv1620161,nssv1620136,nssv1620156,nssv1620149,nssv1620168,nssv1620138,nssv1620174,nssv1620169,nssv1620162,nssv1620176,nssv1620144,nssv1620179,nssv1620147,nssv1620165,nssv1620150,nssv1620158,nssv1620133,nssv1620134,nssv1620129,nssv1620159,nssv1620130,nssv1620173,nssv1620167,nssv1620131,nssv1620157,nssv1620143,nssv1620145,nssv1620142,nssv1620139,nssv1620166,nssv1620140,nssv1620126,nssv1620160,nssv1620155,nssv1620163,nssv1620141,nssv1620177,nssv1620137,nssv1620154,nssv1620146,nssv1620170,nssv1620171,nssv1620178,nssv1620128,nssv1620132,nssv1620164,nssv1620172 M 270 0 56 "" NA18503,NA18504,NA18508,NA18515,NA18516,NA18517,NA18521,NA18522,NA18523,NA18852,NA18854,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18871,NA18872,NA18912,NA18913,NA18914,NA19093,NA19094,NA19101,NA19102,NA19103,NA19116,NA19119,NA19120,NA19128,NA19131,NA19137,NA19138,NA19139,NA19141,NA19142,NA19143,NA19145,NA19152,NA19154,NA19159,NA19161,NA19171,NA19172,NA19173,NA19193,NA19194,NA19200,NA19202,NA19203,NA19209,NA19211,NA19238,NA19239,NA19240 esv32854 1 246933979 246940659 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv94951 M 51 0 1 "" 22231 nsv478003 1 246934899 246934899 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011320 M 9 1 0 "" NA18517 nsv549743 1 246935401 246938969 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740126 M 17421 0 1 "" nsv549744 1 246935401 246941808 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740127 M 17421 0 1 "" nsv476450 1 246935947 246935947 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019485 M 9 1 0 "" NA12878 nsv514049 1 246936576 246940896 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2858279,nssv2858280,nssv2858270,nssv2858336,nssv2858263,nssv2858310,nssv2857609,nssv2858321,nssv2858275,nssv2858316,nssv2858276,nssv2858341,nssv2858265,nssv2858342,nssv2857614,nssv2858296,nssv2858269,nssv2858345,nssv2857611,nssv2858354,nssv2858277,nssv2858299,nssv2858267,nssv2858338,nssv2857615,nssv2858302,nssv2858278,nssv2858301,nssv2857613,nssv2858347,nssv2858268,nssv2858360,nssv2858262,nssv2858281,nssv2858264,nssv2858337,nssv2858271,nssv2858322,nssv2858266,nssv2858297,nssv2857617,nssv2858320,nssv2858274,nssv2858346,nssv2857612,nssv2858289,nssv2858273,nssv2858305,nssv2857616,nssv2858348,nssv2857610,nssv2858339,nssv2858272,nssv2858318,nssv2858315,nssv2858352,nssv2858358,nssv2858306,nssv2858309,nssv2858351,nssv2858324,nssv2858293,nssv2858313,nssv2858286,nssv2858363,nssv2858314,nssv2858291,nssv2858287,nssv2858304,nssv2858294,nssv2858331,nssv2858362,nssv2858292,nssv2858359,nssv2858357,nssv2858288,nssv2858355,nssv2858329,nssv2858328,nssv2858335,nssv2858353,nssv2858327,nssv2858307,nssv2858283,nssv2858285,nssv2858323,nssv2858282,nssv2858334,nssv2858326,nssv2858284,nssv2858312,nssv2858295,nssv2858349,nssv2858303,nssv2858330,nssv2858311,nssv2858350,nssv2858361,nssv2858344,nssv2858340,nssv2858332,nssv2858308,nssv2858290,nssv2858298,nssv2858356,nssv2858319,nssv2858333,nssv2858300,nssv2858325,nssv2858343,nssv2858317 M 2366 0 111 "" NA18484,NA18486,NA18488,NA18497,NA18498,NA18499,NA18503,NA18504,NA18508,NA18516,NA18517,NA18518,NA18522,NA18523,NA18852,NA18854,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18871,NA18872,NA18908,NA18909,NA18910,NA18911,NA18917,NA18923,NA18933,NA18934,NA18935,NA19093,NA19094,NA19095,NA19096,NA19097,NA19101,NA19102,NA19103,NA19114,NA19115,NA19116,NA19117,NA19119,NA19120,NA19122,NA19128,NA19131,NA19137,NA19138,NA19141,NA19142,NA19143,NA19145,NA19146,NA19148,NA19149,NA19151,NA19152,NA19154,NA19159,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19179,NA19180,NA19184,NA19186,NA19190,NA19193,NA19194,NA19200,NA19202,NA19209,NA19211,NA19236,NA19237,NA19239,NA19240,NA19257,NA19258,NA21309,NA21317,NA21382,NA21383,NA21384,NA21386,NA21388,NA21391,NA21399,NA21400,NA21401,NA21453,NA21454,NA21455,NA21476,NA21477,NA21478,NA21480,NA21493,NA21580,NA21614,NA21648,NA21686 nsv474903 1 246938627 246938627 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020482 M 9 1 0 "" NA18956 nsv472972 1 246939301 246939301 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012444 M 9 1 0 "" NA19129 nsv479275 1 246941307 246941307 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019969 M 9 0 0 "" nsv479556 1 246942438 246942438 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020151 M 9 0 0 "" nsv479555 1 246943150 246943150 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013446 M 9 0 0 "" nsv475829 1 246943183 246943183 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012152 M 9 1 0 "" NA12878 nsv478529 1 246946031 246946031 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011392 M 9 1 0 "" NA18507 esv26240 1 246961179 246961640 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11747 M 40 0 1 "" NA18858 esv3426049 1 246973752 246974750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692234 M 185 1 0 "" NA19239 esv2259520 1 246974288 246974689 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4859515 M 1 0 1 "" NA18507 nsv999043 1 247034179 247190999 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486206,nssv3488467 M 29084 2 0 MIR3124,PGBD2,SH3BP5L,ZNF672,ZNF692 esv3436399 1 247036607 247036607 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824036 M 185 1 0 "" NA12878 nsv1009216 1 247040508 247082090 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502674 M 29084 1 0 SH3BP5L nsv477346 1 247052956 247052956 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017225 M 9 1 0 "" NA18517 nsv480153 1 247054841 247054841 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016073 M 9 0 0 "" nsv481353 1 247055922 247055922 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014966 M 9 0 0 "" nsv480740 1 247055925 247055925 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015432 M 9 0 0 "" esv23719 1 247056376 247057061 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11346 M 40 0 1 "" NA19240 nsv472834 1 247056512 247056512 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012738 M 9 1 0 "" NA18555 nsv476350 1 247058875 247058875 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013863 M 9 1 0 "" NA12878 nsv478217 1 247062518 247062518 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016728 M 9 1 0 "" NA18507 esv1201119 1 247064265 247064265 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4056644 M 2 1 0 "" HuRef esv2145823 1 247073136 247073573 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4877845 M 1 0 1 SH3BP5L NA18507 nsv5398 1 247084218 247117446 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5144 M 9 1 0 MIR3124,SH3BP5L,ZNF672,ZNF692 NA19129 nsv549745 1 247087307 247164787 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740128 M 17421 0 1 ZNF672,ZNF692 nsv478071 1 247089953 247089953 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014243 M 9 1 0 "" NA18517 dgv644n100 1 247095424 247190999 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1015050,nsv1014929,nsv1002991,nsv1003280 M 29084 6 0 PGBD2,ZNF672,ZNF692 esv21433 1 247111544 247117170 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20727 M 40 0 1 ZNF692 NA19108 dgv645n100 1 247124862 247190999 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997881,nsv1011250,nsv1008925,nsv1013610 M 29084 9 0 PGBD2 nsv1006608 1 247135059 247190999 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486729,nssv3491057,nssv3490965,nssv3495277,nssv3487050,nssv3502577 M 29084 4 2 PGBD2 esv2762236 1 247138092 247160079 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007185 M 1109 0 1 "" RW_0508 nsv5410 1 247149254 247173069 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv696 M 9 1 0 PGBD2 NA19240 nsv1002524 1 247151278 247190999 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501548 M 29084 1 0 PGBD2 nsv499174 1 247172155 247172246 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv586175 M 9 1 0 PGBD2 esv1398356 1 247172590 247172590 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4296400 M 2 1 0 PGBD2 HuRef nsv945482 1 247177614 247197814 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1829486,nssv1830731,nssv1829459,nssv1830765,nssv1829476,nssv1830738,nssv1829467,nssv1829483,nssv1829479,nssv1830727,nssv1829460,nssv1830726,nssv1830775,nssv1829485,nssv1829475,nssv1830752,nssv1829471,nssv1830742,nssv1829487,nssv1830756,nssv1829465,nssv1830750,nssv1830767,nssv1830778,nssv1830772,nssv1830749,nssv1829469,nssv1830723,nssv1830776,nssv1830777,nssv1830770,nssv1830766,nssv1829461,nssv1830732,nssv1829473,nssv1830744,nssv1829468,nssv1830759,nssv1830769,nssv1830745,nssv1829464,nssv1830785,nssv1830773,nssv1830734,nssv1830774,nssv1829484,nssv1829472,nssv1830780,nssv1830721,nssv1830720,nssv1829478,nssv1830764,nssv1829482,nssv1830730,nssv1829470,nssv1830740,nssv1829463,nssv1830751,nssv1829474,nssv1830743,nssv1830771,nssv1830755,nssv1829480,nssv1830763,nssv1829477,nssv1830737,nssv1830768,nssv1830754,nssv1829466,nssv1830747,nssv1829462,nssv1830779,nssv1830748,nssv1830724,nssv1830757,nssv1830762,nssv1829458,nssv1830728,nssv1830783,nssv1830741,nssv1830786,nssv1830761,nssv1830735,nssv1830739,nssv1830729,nssv1830753,nssv1830733,nssv1830784,nssv1830736,nssv1830746,nssv1829481,nssv1830781,nssv1830760,nssv1830782,nssv1830725,nssv1830758,nssv1830722 M 97 10 0 PGBD2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv947098 1 247187300 247197814 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2606249,nssv2606240,nssv2606242,nssv2606248,nssv2606247,nssv2606244,nssv2606243,nssv2606241,nssv2606250,nssv2606245,nssv2606246 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3448644 1 247191752 247193450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692235 M 185 1 0 "" NA19238 dgv338e59 1 247193652 247199750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3432213,esv3381300,esv3415699,esv3394994,esv3364850,esv3328017 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv2759723 10 50001 214405 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2758207 M 270 2 0 TUBB8,ZMYND11 NA18853,NA19101 esv24948 10 50073 125923 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11432 M 40 3 0 TUBB8 NA12006,NA18502,NA18916 nsv947724 10 52633 124700 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830788,nssv1830532,nssv1830807,nssv1830523,nssv1830553,nssv1830820,nssv1830808,nssv1830552,nssv1830797,nssv1830529,nssv1830558,nssv1830537,nssv1830801,nssv1830787,nssv1830560,nssv1830566,nssv1830793,nssv1830832,nssv1830555,nssv1830813,nssv1830816,nssv1830550,nssv1830804,nssv1830833,nssv1830802,nssv1830531,nssv1830805,nssv1830548,nssv1830799,nssv1830828,nssv1830815,nssv1830823,nssv1830789,nssv1830527,nssv1830556,nssv1830569,nssv1830809,nssv1830533,nssv1830796,nssv1830549,nssv1830798,nssv1830524,nssv1830554,nssv1830565,nssv1830800,nssv1830551,nssv1830561,nssv1830570,nssv1830806,nssv1830824,nssv1830562,nssv1830817,nssv1830791,nssv1830827,nssv1830557,nssv1830528,nssv1830818,nssv1830821,nssv1830790,nssv1830831,nssv1830792,nssv1830572,nssv1830795,nssv1830829,nssv1830794,nssv1830534,nssv1830812,nssv1830544,nssv1830559,nssv1830543,nssv1830819,nssv1830525,nssv1830803,nssv1830539,nssv1830811,nssv1830540,nssv1830825,nssv1830810,nssv1830541,nssv1830545,nssv1830530,nssv1830830,nssv1830567,nssv1830547,nssv1830536,nssv1830814,nssv1830563,nssv1830546,nssv1830568,nssv1830571,nssv1830564,nssv1830526,nssv1830538,nssv1830826,nssv1830535,nssv1830542,nssv1830822 M 97 10 0 TUBB8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv646n100 10 62797 151393 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1053736,nsv1041943 M 29084 2 6 TUBB8 dgv647n100 10 62797 154660 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1053793,nsv1042793,nsv1054622,nsv1046504,nsv1045283,nsv1051040,nsv1050135,nsv1038030,nsv1048591 M 29084 37 0 TUBB8 dgv648n100 10 62797 193746 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1037682,nsv1050312,nsv1054986 M 29084 5 0 TUBB8,ZMYND11 dgv649n100 10 62797 264675 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1047868,nsv1044775,nsv1048232,nsv1040332 M 29084 5 0 TUBB8,ZMYND11 esv3385682 10 63652 71150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8688127 M 185 1 0 "" NA19238 nsv8592 10 83225 124295 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv23282 M 31 1 0 TUBB8 NA19221 dgv117n67 10 106247 184477 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825203,nsv825202,nsv825204 M 31 3 0 ZMYND11 NA18968,NA18969,NA18973 dgv650n100 10 119858 306839 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1043157,nsv1047925 M 29084 2 0 ZMYND11 esv2764047 10 119870 133255 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994388,essv6994387,essv6994390 M 1109 0 3 "" SW_0089,SW_1174,SW_1175 nsv549746 10 122330 125853 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740129,nssv740131,nssv740130 M 17421 0 3 "" nsv549747 10 122330 129676 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740132 M 17421 0 1 "" esv33395 10 123411 133840 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv97005,essv95242 M 51 1 1 "" 21817,21872 nsv442168 10 123551 133255 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1658956,nssv1658957,nssv1658958 M 270 0 3 "" NA06991,NA06993,NA11831 dgv923n54 10 123803 129676 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549748,nsv549749 M 17421 0 4 "" nsv1037507 10 133543 235404 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484702 M 29084 1 0 ZMYND11 nsv5476 10 142328 168978 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8336 M 9 1 0 "" NA12156 nsv8593 10 161290 164823 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv18696 M 31 0 1 "" NA10863 nsv8594 10 170341 173501 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv16729,nssv16511,nssv18989,nssv18637,nssv17642,nssv19037,nssv18999,nssv16930,nssv18346,nssv19478,nssv18290,nssv18726,nssv18933 M 31 12 1 ZMYND11 NA07029,NA07048,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18552,NA18563,NA18572,NA18853,NA19173 dgv651n100 10 197572 775929 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1036501,nsv1052660 M 29084 2 0 DIP2C,MIR5699,PRR26,ZMYND11 nsv466693 10 245222 556195 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542174 M 1557 1 0 DIP2C,ZMYND11 HGDP00811 nsv549750 10 245222 556195 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174092 M 17421 1 0 DIP2C,ZMYND11 HGDP00811 esv3891734 10 263344 456286 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25792552 M 3017 1 0 DIP2C,ZMYND11 nsv819561 10 288685 288938 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419481 M 2 0 1 ZMYND11 AK1 esv26902 10 300347 301221 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14077 M 40 1 0 "" NA12156 esv1571982 10 300537 300596 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4095962 M 2 0 1 "" HuRef esv1362728 10 300823 300941 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4207285 M 2 0 1 "" HuRef nsv549751 10 303304 724229 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174093 M 17421 1 0 DIP2C,MIR5699,PRR26 HGDP00728 nsv519746 10 349403 363048 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv683531,nssv658119,nssv677936,nssv672781,nssv680300,nssv686857,nssv680904 M 2026 0 7 DIP2C esv998813 10 356876 361516 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564499 M 3 1 0 DIP2C HuRef esv29290 10 357481 359597 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16931,esv12383 M 40 1 23 DIP2C NA07045,NA11931,NA12044,NA12489,NA12776,NA12828,NA12878,NA18502,NA18505,NA18511,NA18517,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv549752 10 357632 359374 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740137 M 17421 0 1 DIP2C esv1678258 10 358883 358883 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4291830 M 2 1 0 DIP2C HuRef esv2594246 10 358904 358954 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5390887 M 1 0 1 DIP2C NA18507 esv1320039 10 359129 359425 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4045222 M 2 0 1 DIP2C HuRef esv7892 10 373121 374021 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30333 M 1 0 0 DIP2C esv1024446 10 373222 373222 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3611228 M 2 1 0 DIP2C HuRef esv28717 10 381342 383842 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17514 M 40 1 0 DIP2C NA06985 esv1103672 10 381974 382065 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3749048 M 2 0 1 DIP2C HuRef esv1514144 10 382936 382936 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4242943 M 2 1 0 DIP2C HuRef esv1755649 10 383382 383564 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3845726 M 2 0 1 DIP2C HuRef esv1558074 10 383629 383725 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4236810 M 2 0 1 DIP2C HuRef esv9223 10 403688 404299 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31664 M 1 0 0 DIP2C esv990983 10 403844 404133 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571588 M 3 0 1 DIP2C HuRef esv1403517 10 403889 404179 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3926533 M 2 0 1 DIP2C HuRef dgv11n6 10 403945 404234 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv24306,nsv24885 M 24 DIP2C esv2638964 10 414446 414533 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5246700 M 1 0 1 DIP2C NA18507 nsv477039 10 424519 424519 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018121 M 9 1 0 DIP2C NA12878 esv1344682 10 430435 430435 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3885761 M 2 1 0 DIP2C HuRef esv997336 10 430494 430711 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580402 M 3 0 1 DIP2C HuRef esv25478 10 435363 440118 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10652 M 40 5 2 DIP2C NA12489,NA18508,NA18511,NA18523,NA19129,NA19147,NA19225 esv2016393 10 437857 439750 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4503801 M 1 0 1 DIP2C NA18507 nsv512134 10 437864 440406 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624694 M 1 0 1 DIP2C 1 nsv549753 10 448477 884838 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740138 M 17421 1 0 DIP2C,LARP4B,MIR5699,PRR26 esv2500904 10 453092 454611 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5202320 M 1 0 1 DIP2C NA18507 nsv549754 10 453246 454216 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740139 M 17421 0 1 DIP2C esv2037768 10 453442 453988 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4613778 M 1 0 1 DIP2C NA18507 esv29656 10 453557 454247 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13591 M 40 9 0 DIP2C NA11894,NA11995,NA12239,NA12287,NA12414,NA12776,NA12828,NA18907,NA19129 nsv820645 10 453557 454247 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420838 M 1 0 1 DIP2C NA10851 nsv549755 10 453573 453942 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740140 M 17421 0 1 DIP2C nsv549756 10 453573 454158 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740141,nssv740147,nssv740146,nssv740143,nssv740144,nssv740142,nssv740145,nssv740149,nssv740148,nssv740150,nssv740152,nssv740151 M 17421 12 0 DIP2C esv2341391 10 453583 454285 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4536335 M 1 0 1 DIP2C NA18507 esv3416 10 453629 454383 CNV loss Wang_et_al_2008 18987735 Sequencing essv25857 M 1 0 1 DIP2C YH nsv549757 10 453631 454158 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740153 M 17421 0 1 DIP2C nsv549758 10 453686 453942 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740156,nssv740155,nssv740154 M 17421 0 3 DIP2C nsv549759 10 453789 453942 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740158,nssv740157,nssv740159,nssv740160,nssv740161 M 17421 0 5 DIP2C nsv831765 10 456002 621099 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448167,nssv1448162,nssv1448164,nssv1448160,nssv1448159,nssv1448163,nssv1448168,nssv1448169,nssv1448158,nssv1448156,nssv1448166,nssv1448157,nssv1448165 M 95 0 13 DIP2C nsv25193 10 472622 472681 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43771 M 24 DIP2C nsv524243 10 477973 481349 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700133 M 2026 0 1 DIP2C esv28009 10 479896 485269 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18387,esv12132 M 40 0 8 DIP2C NA12828,NA18505,NA18858,NA18916,NA19108,NA19114,NA19190,NA19240 esv2242829 10 480026 480531 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4497511 M 1 0 1 DIP2C NA18507 esv4124 10 480033 480493 CNV loss Wang_et_al_2008 18987735 Sequencing essv26565 M 1 0 1 DIP2C YH esv2572990 10 483054 485198 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5358919 M 1 0 1 DIP2C NA18507 esv2328251 10 490327 490769 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4897788 M 1 0 1 DIP2C NA18507 esv22803 10 491198 492333 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17521 M 40 0 2 DIP2C NA11894,NA12828 esv1139005 10 491549 491549 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3742456 M 2 1 0 DIP2C HuRef esv1664973 10 491695 491695 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3992182 M 2 1 0 DIP2C HuRef nsv5487 10 541380 544336 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3855 M 9 1 0 DIP2C NA12878 nsv509339 10 542101 560992 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619287 M 4 1 0 DIP2C NA10860 nsv975789 10 542324 548059 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2757355 M 97 1 0 DIP2C HGDP00665 dgv339e59 10 552252 552889 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3365814,esv3447660 M 185 2 0 DIP2C NA19238,NA19240 esv3335198 10 553754 553773 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9645424 M 185 1 0 DIP2C NA19141 esv3305983 10 553763 553764 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7769523 M 185 1 0 DIP2C NA19141 nsv819504 10 554975 556064 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419168 M 2 1 0 DIP2C AK1 esv1547088 10 559286 559286 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4315673 M 2 1 0 DIP2C HuRef esv1439616 10 559464 559464 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3741497 M 2 1 0 DIP2C HuRef nsv528733 10 567444 828378 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705389 M 2026 1 0 DIP2C,MIR5699,PRR26 nsv25268 10 568662 568733 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43846 M 24 DIP2C nsv1044267 10 571928 635916 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500165 M 29084 1 0 DIP2C nsv1035990 10 580118 627965 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482850 M 29084 0 1 DIP2C dgv924n54 10 582283 632943 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549761,nsv549760 M 17421 2 0 DIP2C NINDS_6 nsv466695 10 585504 632943 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542176 M 1557 1 0 DIP2C NINDS_6 nsv549762 10 591089 642423 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740163 M 17421 0 1 DIP2C esv2467819 10 591663 592490 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5162775 M 1 1 0 DIP2C NA18507 esv1450884 10 592254 592254 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3902982 M 2 1 0 DIP2C HuRef dgv652n100 10 601870 658143 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1050010,nsv1038478,nsv1037417 M 29084 3 0 DIP2C dgv653n100 10 605265 638928 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1050522,nsv1045012 M 29084 2 0 DIP2C nsv527312 10 608685 631961 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703736 M 2026 0 1 DIP2C nsv520943 10 613410 616412 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697700 M 2026 0 1 DIP2C nsv466696 10 622748 670428 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542177 M 1557 1 0 DIP2C HGDP00811 nsv549763 10 622748 670428 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174095 M 17421 1 0 DIP2C HGDP00811 nsv818740 10 629750 632943 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417697 M 112 1 0 DIP2C NA18999 esv1111279 10 642546 642546 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3595000 M 2 1 0 DIP2C HuRef esv2650676 10 644029 644807 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5242097 M 1 1 0 DIP2C NA18507 esv1922448 10 659411 659831 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4886962 M 1 0 1 DIP2C NA18507 nsv549764 10 661495 694460 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740164 M 17421 0 1 DIP2C,MIR5699,PRR26 dgv118n67 10 667475 808192 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825205,nsv825206 M 31 2 0 DIP2C,MIR5699,PRR26 NA18969,NA18973 esv1191119 10 675111 675111 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3611463 M 2 1 0 DIP2C HuRef esv1374087 10 684300 684705 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4059317 M 2 0 1 DIP2C HuRef esv2537541 10 691711 692729 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5234510 M 1 1 0 DIP2C,PRR26 NA18507 esv21741 10 692973 694403 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19478 M 40 2 0 DIP2C,PRR26 NA18523,NA18861 dgv340e59 10 693052 694350 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3333234,esv3419263 M 185 2 0 DIP2C,PRR26 NA19239,NA19240 esv1255045 10 693099 693711 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4264705 M 2 0 1 DIP2C,PRR26 HuRef nsv24219 10 694097 694348 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv42797 M 24 DIP2C,PRR26 dgv341e59 10 703152 704850 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3363548,esv3388326 M 185 2 0 DIP2C NA19239,NA19240 nsv511462 10 709803 724229 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626076 M 1 0 1 DIP2C 1 esv2276553 10 714465 714819 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4769535 M 1 0 1 DIP2C NA18507 esv26085 10 714635 715865 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10975 M 40 1 0 DIP2C NA18861 esv1366852 10 715231 715415 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3798978 M 2 0 1 DIP2C HuRef nsv549765 10 724229 1119527 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740165 M 17421 1 0 DIP2C,GTPBP4,IDI1,IDI2,IDI2-AS1,LARP4B,WDR37 esv24994 10 725338 726029 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9991 M 40 0 1 DIP2C NA07045 esv3136 10 732543 732900 CNV loss Wang_et_al_2008 18987735 Sequencing essv25577 M 1 0 1 "" YH esv1005653 10 733615 733672 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581009 M 3 0 1 "" HuRef dgv654n100 10 738848 845251 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1045119,nsv1036316 M 29084 2 0 LARP4B esv2626436 10 753126 754620 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5186168 M 1 0 1 "" NA18507 esv1007169 10 753692 754352 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586697 M 3 1 0 "" HuRef esv27293 10 753692 754352 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10886 M 40 7 0 "" NA07037,NA11894,NA11931,NA11993,NA12044,NA12239,NA12776 nsv820922 10 753692 754352 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420839 M 1 0 1 "" NA10851 esv1457066 10 753998 754208 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4343869 M 2 0 1 "" HuRef esv24340 10 758189 760183 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv21000,esv14528 M 40 25 0 "" NA07037,NA11894,NA11931,NA11993,NA12044,NA12156,NA12414,NA12776,NA12878,NA18502,NA18508,NA18511,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv1764108 10 759199 759199 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4292043 M 2 1 0 "" HuRef esv1422238 10 759504 759582 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3863959 M 2 0 1 "" HuRef esv1267506 10 759706 759862 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3935458 M 2 0 1 "" HuRef esv2218263 10 764831 765270 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4744897 M 1 0 1 "" NA18507 esv1007335 10 770286 774535 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565061 M 3 0 1 "" HuRef nsv821353 10 771375 774300 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420840 M 1 0 1 "" NA10851 esv23689 10 771375 774764 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11700 M 40 38 0 "" NA06985,NA07037,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv1129028 10 771757 771969 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4026334 M 2 0 1 "" HuRef esv1402338 10 772026 774362 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4004963 M 2 0 1 "" HuRef dgv34n21 10 777896 792272 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv521935,nsv525722 M 2026 2 0 "" esv33616 10 789859 790003 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv98573,essv96370 M 51 0 2 "" 22085,22371 esv1631838 10 793296 793499 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4188129 M 2 0 1 "" HuRef esv32889 10 808451 824608 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv99875 M 51 1 0 "" 22086 esv1472850 10 813543 813739 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4095118 M 2 0 1 "" HuRef esv2132531 10 814190 814587 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4699611 M 1 0 1 "" NA18507 esv26886 10 814287 816877 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14112 M 40 0 2 "" NA11894,NA12776 esv1007697 10 814301 814448 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585377 M 3 0 1 "" HuRef esv1646489 10 819773 820444 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4038780 M 2 0 1 "" HuRef nsv1048707 10 824439 905534 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501317 M 29084 1 0 LARP4B nsv466698 10 826115 878073 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542178 M 1557 0 1 LARP4B HGDP00696 nsv549766 10 826115 878073 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174096 M 17421 0 1 LARP4B HGDP00696 esv28646 10 829593 830268 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20284 M 40 0 4 "" NA12004,NA12749,NA12878,NA19114 nsv821541 10 829593 830268 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420841 M 1 0 1 "" NA10851 esv1515761 10 829872 830176 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3954408 M 2 0 1 "" HuRef nsv5498 10 839137 850462 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8342 M 9 0 1 LARP4B NA12156 nsv510208 10 843917 849917 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621214,nssv618322 M 4 0 0 LARP4B CHM,NA15510 nsv820121 10 848606 848907 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419858 M 2 1 0 LARP4B AK1 nsv819263 10 878068 879094 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419156 M 2 0 1 LARP4B AK1 nsv5509 10 923197 928934 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8349 M 9 1 0 LARP4B NA12156 esv2638233 10 936775 937072 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5174743 M 1 0 1 LARP4B NA18507 dgv119n67 10 947020 995451 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825207,nsv825208 M 31 2 0 LARP4B NA18969,NA18973 nsv5521 10 976842 1021352 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1835 M 9 0 1 "" NA18555 nsv1037193 10 979533 1009630 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3484460 M 29084 0 1 "" nsv523365 10 981737 984753 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699114 M 2026 0 1 "" nsv512135 10 987493 989461 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624695 M 1 0 1 "" 1 esv24858 10 987546 990640 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20739 M 40 18 0 "" NA06985,NA11894,NA11931,NA11993,NA12004,NA12044,NA12287,NA12776,NA15510,NA18505,NA18858,NA18907,NA18916,NA19108,NA19114,NA19147,NA19225,NA19257 nsv511433 10 987560 990973 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626045 M 1 0 1 "" 1 esv21662 10 990685 991180 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19963 M 40 0 1 "" NA18907 esv1147861 10 995505 995557 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3932338 M 2 0 1 "" HuRef nsv525014 10 1003535 1014214 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701051 M 2026 0 1 "" nsv25261 10 1011935 1012098 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43839 M 24 "" esv3891735 10 1014214 1100464 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25790646 M 3017 1 0 GTPBP4,IDI1,IDI2,IDI2-AS1,WDR37 esv2551854 10 1045467 1046465 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5326227 M 1 1 0 GTPBP4 NA18507 esv24871 10 1045951 1047375 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11427 M 40 1 0 GTPBP4 NA19114 esv1067888 10 1045977 1046055 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4138695 M 2 0 1 GTPBP4 HuRef esv1468754 10 1047398 1047398 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3739651 M 2 1 0 GTPBP4 HuRef esv1989555 10 1051128 1051623 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4983104 M 1 0 1 GTPBP4 NA18507 nsv1046220 10 1054024 1178998 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494449 M 29084 1 0 IDI1,IDI2,IDI2-AS1,WDR37 nsv549767 10 1054940 1063684 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740167,nssv740166,nssv740168 M 17421 0 3 IDI2,IDI2-AS1 nsv474852 10 1059287 1059287 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011505 M 9 1 0 IDI2,IDI2-AS1 NA18956 nsv5532 10 1069499 1091700 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8358 M 9 0 1 IDI1,IDI2-AS1 NA12156 esv1721755 10 1074763 1074952 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4314270 M 2 0 1 IDI2-AS1 HuRef esv1000079 10 1074772 1074960 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570329 M 3 0 1 IDI2-AS1 HuRef esv2156728 10 1078662 1079089 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4617017 M 1 0 1 IDI1,IDI2-AS1 NA18507 esv2483699 10 1082125 1083982 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5194311 M 1 0 1 IDI1 NA18507 nsv512136 10 1082349 1085373 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624696 M 1 0 1 IDI1 1 esv990965 10 1082581 1083980 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565565 M 3 0 1 IDI1 HuRef nsv1054432 10 1105626 1220431 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502624 M 29084 1 0 ADARB2,LINC00200,WDR37 nsv521885 10 1106671 1107514 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694107 M 2026 0 1 WDR37 nsv1041498 10 1107200 1750190 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488428 M 29084 1 0 ADARB2,ADARB2-AS1,LINC00200,WDR37 nsv476445 10 1108791 1108791 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019835 M 9 1 0 WDR37 NA12878 esv2573324 10 1153453 1154910 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5358331 M 1 0 1 WDR37 NA18507 esv1009406 10 1154029 1154200 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572728 M 3 0 1 WDR37 HuRef esv1356116 10 1154141 1154313 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3672271 M 2 0 1 WDR37 HuRef nsv549768 10 1156400 1341088 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740169 M 17421 1 0 ADARB2,LINC00200,WDR37 dgv655n100 10 1169519 1527451 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1047911,nsv1045618 M 29084 2 0 ADARB2,LINC00200 esv3891737 10 1175306 1209153 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789161 M 3017 1 0 LINC00200 nsv476493 10 1176410 1176410 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016332 M 9 1 0 "" NA12878 dgv656n100 10 1185214 1277772 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1039304,nsv1041995 M 29084 2 0 ADARB2,LINC00200 nsv1046041 10 1185214 2179155 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490775 M 29084 1 0 ADARB2,ADARB2-AS1,LINC00200,LINC00700,MIR6072 nsv517780 10 1192448 1220968 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv688650,nssv696134,nssv684790,nssv676229,nssv653233,nssv664815,nssv682313 M 2026 0 7 ADARB2,LINC00200 esv1007272 10 1195626 1195626 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578771 M 3 1 0 "" HuRef esv1247301 10 1195783 1195783 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4044199 M 2 1 0 LINC00200 HuRef nsv527883 10 1208030 1304548 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704385 M 2026 1 0 ADARB2 esv2761563 10 1220443 1331958 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994391 M 1109 0 1 ADARB2 SW_1217 nsv509340 10 1222871 1289901 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619608,nssv620972 M 4 2 0 ADARB2 NA10860,NA15510 dgv925n54 10 1234020 1894598 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549769,nsv549786 M 17421 2 0 ADARB2,ADARB2-AS1 nsv25073 10 1241273 1241344 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43651 M 24 ADARB2 esv2505047 10 1245340 1245507 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5188209 M 1 0 1 ADARB2 NA18507 esv988420 10 1248629 1248629 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585677 M 3 1 0 ADARB2 HuRef esv1424351 10 1248722 1248722 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4118497 M 2 1 0 ADARB2 HuRef esv1227692 10 1265643 1265643 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4149316 M 2 1 0 ADARB2 HuRef nsv5543 10 1266965 1302291 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3856 M 9 1 0 ADARB2 NA12878 dgv342e59 10 1267752 1269150 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3426119,esv3331395 M 185 2 0 ADARB2 NA19239,NA19240 esv28216 10 1271299 1272456 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14020 M 40 6 12 ADARB2 NA07045,NA11931,NA11995,NA12156,NA12287,NA12489,NA12776,NA12878,NA18502,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19108,NA19129 esv1541589 10 1271413 1271581 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3870213 M 2 0 1 ADARB2 HuRef dgv926n54 10 1271436 1272372 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549774,nsv549771 M 17421 2 0 ADARB2 dgv927n54 10 1271436 1272372 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549777,nsv549776,nsv549770,nsv549779,nsv549781 M 17421 0 17 ADARB2 dgv928n54 10 1271487 1272170 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549773,nsv549778,nsv549772 M 17421 0 4 ADARB2 dgv929n54 10 1271487 1272372 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549775,nsv549780 M 17421 3 9 ADARB2 esv3396299 10 1271508 1271639 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808484 M 185 1 0 ADARB2 NA12878 esv1388155 10 1271639 1271822 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4042910 M 2 0 1 ADARB2 HuRef dgv930n54 10 1271754 1272372 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549785,nsv549784,nsv549783,nsv549782 M 17421 0 9 ADARB2 esv1596673 10 1272241 1272313 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3696491 M 2 0 1 ADARB2 HuRef esv3305675 10 1282081 1282082 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7797836,essv7772299,essv7788114,essv7800110,essv7813539,essv7787521,essv7784850,essv7802981,essv7772970,essv7834008,essv7770322,essv7783745,essv7809813,essv7795550,essv7815547,essv7797595,essv7823860,essv7821827,essv7816699,essv7809526,essv7822369,essv7827436,essv7819743,essv7789280,essv7820498,essv7834909,essv7787172,essv7799206,essv7798395,essv7802476,essv7780924,essv7772074,essv7793709,essv7830267,essv7801483,essv7785889,essv7774679,essv7810922,essv7814360,essv7796588,essv7834705,essv7830514,essv7778294,essv7822634,essv7783479,essv7830411,essv7810274,essv7779084,essv7786541,essv7812882,essv7830973,essv7810527,essv7835974,essv7773354 M 185 54 0 ADARB2 NA07037,NA07346,NA11829,NA11881,NA11894,NA11919,NA11920,NA11992,NA12003,NA12006,NA12043,NA12044,NA12045,NA12144,NA12154,NA12249,NA12414,NA12717,NA12749,NA12750,NA12751,NA12872,NA18526,NA18537,NA18552,NA18561,NA18562,NA18566,NA18570,NA18571,NA18572,NA18576,NA18582,NA18603,NA18608,NA18638,NA18940,NA18942,NA18943,NA18944,NA18945,NA18948,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18969,NA18970,NA19005 esv2290022 10 1297424 1297920 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4705522 M 1 0 1 ADARB2 NA18507 esv3891738 10 1312617 1333197 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25798039,essv25795983,essv25797118 M 3017 0 3 ADARB2 esv6414 10 1328457 1328646 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28855 M 1 0 0 ADARB2 esv28240 10 1332801 1333614 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11751 M 40 3 0 ADARB2 NA11995,NA12044,NA18861 nsv549787 10 1332819 1333558 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740216 M 17421 0 1 ADARB2 nsv519127 10 1341088 1356888 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696605 M 2026 0 1 ADARB2 dgv120n67 10 1353185 1428593 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825210,nsv825211 M 31 2 0 ADARB2 NA18969,NA18973 nsv527999 10 1357514 1454892 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704524 M 2026 1 0 ADARB2 esv22298 10 1358859 1359904 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15114 M 40 0 3 ADARB2 NA11995,NA12004,NA12828 nsv549788 10 1358998 1359689 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740217 M 17421 1 0 ADARB2 esv1523107 10 1359038 1359146 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3776425 M 2 0 1 ADARB2 HuRef nsv549789 10 1359268 1359741 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740219,nssv740218,nssv740220 M 17421 0 3 ADARB2 nsv549790 10 1359268 1361610 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740221 M 17421 0 1 ADARB2 esv1613053 10 1359291 1359612 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3742970 M 2 0 1 ADARB2 HuRef esv1589394 10 1359625 1359715 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4058557 M 2 0 1 ADARB2 HuRef esv1032656 10 1359860 1359860 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3751506 M 2 1 0 ADARB2 HuRef esv1537660 10 1359960 1359960 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4337086 M 2 1 0 ADARB2 HuRef esv1309284 10 1360007 1360007 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3889150 M 2 1 0 ADARB2 HuRef esv1258640 10 1360030 1360030 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3588808 M 2 1 0 ADARB2 HuRef esv1647895 10 1360096 1360096 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4089238 M 2 1 0 ADARB2 HuRef esv21703 10 1400813 1401921 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19781 M 40 3 0 ADARB2 NA18523,NA19099,NA19108 esv1352224 10 1401057 1401107 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3646964 M 2 0 1 ADARB2 HuRef esv1008495 10 1401066 1401066 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578624 M 3 1 0 ADARB2 HuRef esv1159013 10 1401124 1401124 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4212844 M 2 1 0 ADARB2 HuRef esv991635 10 1406014 1406014 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583911 M 3 1 0 ADARB2 HuRef esv1105125 10 1406015 1406015 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3651866 M 2 1 0 ADARB2 HuRef esv8410 10 1407947 1408235 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30851 M 1 0 0 ADARB2 nsv1040045 10 1425200 1445768 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487698 M 29084 0 1 ADARB2 dgv344e59 10 1428852 1430550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3378006,esv3359704 M 185 2 0 ADARB2 NA19239,NA19240 esv1082929 10 1429013 1429095 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4330089 M 2 0 1 ADARB2 HuRef nsv1040953 10 1432709 1442786 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483555,nssv3502607,nssv3484275,nssv3483745,nssv3487283 M 29084 0 5 ADARB2 esv2759724 10 1432709 1453158 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757359 M 270 0 1 ADARB2 NA12814 nsv825212 10 1437722 1438334 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1441257 M 31 1 0 ADARB2 NA18969 nsv512137 10 1441411 1443248 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624697 M 1 0 1 ADARB2 1 esv3152 10 1441775 1442515 CNV loss Wang_et_al_2008 18987735 Sequencing essv25593 M 1 0 1 ADARB2 YH esv1009491 10 1441832 1442276 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574669 M 3 0 1 ADARB2 HuRef esv1543111 10 1441853 1442298 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4192655 M 2 0 1 ADARB2 HuRef esv1921685 10 1442012 1442346 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4785314 M 1 0 1 ADARB2 NA18507 nsv25304 10 1442210 1442293 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43882 M 24 ADARB2 nsv474444 10 1459912 1459912 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012664 M 9 1 0 ADARB2 NA18956 nsv549791 10 1469049 1501786 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174097 M 17421 0 1 ADARB2 HGDP00830 esv22010 10 1470300 1472425 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20532 M 40 0 2 ADARB2 NA12489,NA18511 esv998745 10 1471028 1471163 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570713 M 3 0 1 ADARB2 HuRef esv24883 10 1491289 1493104 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15663 M 40 0 9 ADARB2 NA07037,NA11894,NA11931,NA12006,NA12878,NA18523,NA18916,NA19190,NA19240 esv2649249 10 1491700 1493411 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5382158 M 1 0 1 ADARB2 NA18507 esv2247605 10 1491954 1492482 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4843777 M 1 0 1 ADARB2 NA18507 esv22628 10 1496312 1497047 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv9736 M 40 2 0 ADARB2 NA12239,NA19129 esv1493086 10 1496656 1496788 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3903121 M 2 0 1 ADARB2 HuRef esv1372493 10 1496837 1496903 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4342203 M 2 0 1 ADARB2 HuRef esv1004371 10 1506135 1506135 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569263 M 3 1 0 ADARB2 HuRef esv1327835 10 1506140 1506140 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3671651 M 2 1 0 ADARB2 HuRef esv3310506 10 1506141 1506141 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843379 M 185 1 0 ADARB2 NA12878 esv3423659 10 1506142 1506142 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701258 M 185 1 0 ADARB2 NA12878 nsv24658 10 1521528 1521589 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43236 M 24 ADARB2 esv5029 10 1527755 1528122 CNV loss Wang_et_al_2008 18987735 Sequencing essv27470 M 1 0 1 ADARB2 YH esv2474802 10 1531205 1531391 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5355250 M 1 0 1 ADARB2 NA18507 nsv472745 10 1533938 1533938 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016891 M 9 1 0 ADARB2 NA18555 nsv819780 10 1543740 1545458 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419311 M 2 0 1 ADARB2 AK1 nsv1054555 10 1548145 1955145 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496812 M 29084 1 0 ADARB2,ADARB2-AS1 esv23632 10 1572580 1575280 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12070 M 40 0 8 ADARB2,ADARB2-AS1 NA11931,NA12287,NA12414,NA12749,NA12776,NA15510,NA18517,NA19099 nsv821076 10 1572580 1575280 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420842 M 1 0 1 ADARB2,ADARB2-AS1 NA10851 nsv512138 10 1572636 1574318 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624698 M 1 0 1 ADARB2,ADARB2-AS1 1 nsv24360 10 1572650 1574765 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv42938 M 24 ADARB2,ADARB2-AS1 esv1522620 10 1572723 1572806 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4302742 M 2 0 1 ADARB2,ADARB2-AS1 HuRef esv1416852 10 1573629 1574406 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3697793 M 2 0 1 ADARB2,ADARB2-AS1 HuRef esv1588804 10 1574460 1574509 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3692297 M 2 0 1 ADARB2,ADARB2-AS1 HuRef esv1761080 10 1574724 1574773 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4323606 M 2 0 1 ADARB2,ADARB2-AS1 HuRef esv1608725 10 1574856 1574905 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4305445 M 2 0 1 ADARB2,ADARB2-AS1 HuRef esv991990 10 1579767 1579839 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578722 M 3 0 1 ADARB2,ADARB2-AS1 HuRef esv1269144 10 1579803 1579876 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4313439 M 2 0 1 ADARB2,ADARB2-AS1 HuRef nsv549792 10 1581836 1600839 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740222 M 17421 0 1 ADARB2,ADARB2-AS1 esv27475 10 1590267 1591352 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11218 M 40 0 3 ADARB2 NA11931,NA18861,NA18916 dgv931n54 10 1590335 1591083 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549794,nsv549793 M 17421 4 0 ADARB2 nsv549795 10 1590489 1591083 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740229,nssv740228,nssv740227 M 17421 2 1 ADARB2 esv1437533 10 1590810 1590810 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4242319 M 2 1 0 ADARB2 HuRef esv2762837 10 1591101 1620821 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7018117 M 1109 0 1 ADARB2 RW_0131 esv2128674 10 1592459 1592948 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4586396 M 1 0 1 ADARB2 NA18507 esv3846 10 1592612 1592834 CNV loss Wang_et_al_2008 18987735 Sequencing essv26287 M 1 0 1 ADARB2 YH esv3419994 10 1607240 1607240 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8810232 M 185 1 0 ADARB2 NA12878 esv3381443 10 1607241 1607241 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701259 M 185 1 0 ADARB2 NA12878 nsv24116 10 1609434 1609434 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv42694 M 24 ADARB2 nsv825213 10 1620968 1628897 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1424383,nssv1436016 M 31 0 2 ADARB2 NA18566,NA18582 nsv5554 10 1623398 1656112 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6259 M 9 1 0 ADARB2 NA12156 esv28361 10 1623931 1626079 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12463,esv10658 M 40 1 3 ADARB2 NA18907,NA19129,NA19190,NA19225 esv2505756 10 1624032 1625875 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5235230 M 1 0 1 ADARB2 NA18507 esv5670 10 1624243 1625007 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28111 M 1 0 0 ADARB2 esv2859 10 1624459 1624968 CNV loss Wang_et_al_2008 18987735 Sequencing essv25300 M 1 0 1 ADARB2 YH esv1567608 10 1624518 1624518 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4092313 M 2 1 0 ADARB2 HuRef esv1278410 10 1624575 1624575 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4220309 M 2 1 0 ADARB2 HuRef esv1398797 10 1624931 1624994 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4019997 M 2 0 1 ADARB2 HuRef esv1595476 10 1625230 1625356 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4093615 M 2 0 1 ADARB2 HuRef nsv477845 10 1628426 1628426 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014016 M 9 1 0 ADARB2 NA18517 esv25433 10 1647661 1650888 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19528,esv12699 M 40 10 0 ADARB2 NA07037,NA18502,NA18517,NA18909,NA19099,NA19114,NA19147,NA19190,NA19225,NA19240 dgv345e59 10 1648552 1650050 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3332242,esv3432601 M 185 2 0 ADARB2 NA19239,NA19240 nsv821498 10 1648596 1650016 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420843 M 1 1 0 ADARB2 NA10851 nsv549796 10 1655211 1737923 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740230 M 17421 0 1 ADARB2 esv23314 10 1658101 1658606 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv11707 M 40 2 0 ADARB2 NA11993,NA12776 esv1637733 10 1665794 1665794 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3620355 M 2 1 0 ADARB2 HuRef nsv433508 10 1677171 1683445 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463389 M 9 0 1 ADARB2 NA18956 nsv1042322 10 1690702 1789598 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486905 M 29084 1 0 ADARB2 esv3423 10 1691913 1692349 CNV loss Wang_et_al_2008 18987735 Sequencing essv25864 M 1 0 1 ADARB2 YH esv1231222 10 1704868 1704868 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3797809 M 2 1 0 ADARB2 HuRef esv1670054 10 1707241 1707241 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4077679 M 2 1 0 ADARB2 HuRef nsv1043619 10 1722716 1747007 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707663 M 29084 0 1 ADARB2 nsv549797 10 1726049 1746642 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740231 M 17421 0 1 ADARB2 esv998686 10 1727245 1736126 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564335 M 3 0 1 ADARB2 HuRef nsv821012 10 1731322 1734280 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420844 M 1 0 1 ADARB2 NA10851 esv25831 10 1731370 1734179 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv9815 M 40 13 0 ADARB2 NA06985,NA11995,NA12287,NA12489,NA12776,NA18508,NA18511,NA18861,NA18909,NA18916,NA19129,NA19225,NA19257 nsv25176 10 1731677 1731844 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43754 M 24 ADARB2 esv1593452 10 1732901 1733321 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3634384 M 2 0 1 ADARB2 HuRef esv1631254 10 1733377 1733799 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4269737 M 2 0 1 ADARB2 HuRef nsv528115 10 1746440 1764564 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704658 M 2026 1 0 ADARB2 esv2635359 10 1781846 1783292 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5164058 M 1 0 1 "" NA18507 esv2285730 10 1782220 1782863 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4769615 M 1 0 1 "" NA18507 esv5320 10 1782337 1782970 CNV loss Wang_et_al_2008 18987735 Sequencing essv27761 M 1 0 1 "" YH esv2466227 10 1782397 1782670 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5287675 M 1 0 1 "" NA18507 esv1999400 10 1832456 1832847 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4571963 M 1 0 1 "" NA18507 esv1164523 10 1832483 1832565 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3751328 M 2 0 1 "" HuRef dgv18e55 10 1842791 1913396 CNV gain Pinto_et_al_2007 17911159 SNP array esv34498,esv34804 M 771 7 0 "" NA18952,NA18974 esv2759725 10 1842791 1913557 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757360 M 270 2 2 "" NA18870,NA18952,NA18974,NA19099 esv2760112 10 1847063 1862524 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7018118,essv7018119 M 1109 0 2 "" RW_0158,RW_0623 nsv442169 10 1853064 1909687 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1658959,nssv1658960 M 270 2 0 "" NA18952,NA18974 nsv818741 10 1860359 1904417 CNV gain Wang_et_al_2007 17921354 SNP array nssv1417428 M 112 1 0 "" NA18952 esv2760119 10 1874624 1896265 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7018120,essv7018131,essv7018132,essv7018123,essv7018126,essv7018121,essv7018129,essv7018127,essv7018130,essv7018125,essv7018128,essv7018124 M 1109 0 12 "" RW_0088,RW_0117,RW_0231,RW_0309,RW_0329,RW_0334,RW_0346,RW_0554,RW_0558,RW_0590,RW_0597,RW_0653 nsv1040241 10 1878940 2011748 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487898 M 29084 1 0 "" nsv1045503 10 1881083 1892688 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500308 M 29084 0 1 "" nsv1046166 10 1886940 1902541 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3491261 M 29084 1 0 "" esv992378 10 1900049 1900049 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584776 M 3 1 0 "" HuRef esv3333981 10 1900093 1900093 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8639545 M 185 0 0 "" nsv1053208 10 1903123 1913821 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502475 M 29084 0 1 "" nsv521102 10 1924068 1974760 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697788 M 2026 1 0 "" dgv657n100 10 1924375 1982646 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1051720,nsv1037341,nsv1038809 M 29084 3 0 "" dgv658n100 10 1929533 1982646 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1045817,nsv1035797 M 29084 0 2 "" nsv521999 10 1962657 1965035 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694768 M 2026 0 1 "" esv3329671 10 1971877 1971877 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8639546 M 185 0 0 "" nsv5565 10 1998880 2027332 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10625 M 9 1 0 "" NA18956 esv2585555 10 2003190 2004517 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5162380 M 1 0 1 "" NA18507 esv2337387 10 2003622 2004041 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4584734 M 1 0 1 "" NA18507 esv1002589 10 2003773 2003894 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566825 M 3 0 1 "" HuRef nsv831766 10 2020000 2189560 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448170 M 95 1 0 LINC00700,MIR6072 nsv1041651 10 2021896 2053701 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3488602 M 29084 1 0 LINC00700 nsv1044354 10 2051750 2077347 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707665 M 29084 0 1 "" esv21786 10 2054190 2082498 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14648,esv14096 M 40 4 0 "" NA12239,NA12828,NA18861,NA19257 esv990125 10 2056869 2057406 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586242 M 3 1 0 "" HuRef esv993855 10 2062569 2068725 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587279 M 3 1 0 "" HuRef nsv549798 10 2063927 2380581 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740232 M 17421 1 0 LINC00701,MIR6072 esv3408059 10 2067530 2067543 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8671734,essv8671738,essv8671737,essv8671739,essv8671736,essv8671735 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv3308815 10 2067536 2067537 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840355,essv7841697,essv7841095,essv7842696,essv7840630,essv7842952 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv3306920 10 2067542 2067543 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7786821,essv7770741,essv7810600,essv7780277,essv7816128,essv7789443,essv7822940,essv7800944,essv7779052,essv7815157,essv7810815,essv7788230,essv7825262,essv7780744,essv7832105,essv7823747,essv7834638,essv7835553,essv7831478,essv7833667,essv7799659,essv7774584,essv7786093,essv7793480,essv7781709,essv7801100,essv7812829,essv7772868,essv7773197,essv7796305,essv7779452,essv7794474,essv7814453,essv7819474,essv7818319,essv7782483,essv7777818,essv7821354,essv7792334,essv7794783,essv7786062,essv7798568,essv7796908,essv7798141,essv7781263,essv7775836,essv7804190,essv7803497,essv7828051,essv7821129,essv7824796,essv7770264,essv7776622,essv7820358,essv7794240,essv7818924,essv7813051,essv7817732,essv7797677,essv7807126,essv7800016,essv7781090,essv7803026,essv7783231,essv7787637,essv7787097,essv7789004,essv7826575,essv7804741,essv7770982,essv7776207,essv7790145,essv7772127,essv7791038,essv7827772,essv7836591,essv7790901,essv7824435,essv7783994,essv7784592,essv7774387,essv7817056,essv7773762,essv7792852,essv7834423,essv7771429,essv7799123,essv7788751,essv7785625,essv7809334,essv7811596,essv7827251,essv7777535,essv7808744,essv7818971 M 185 95 0 "" NA06986,NA07000,NA07037,NA07051,NA07346,NA07357,NA10847,NA10851,NA11831,NA11881,NA11894,NA11918,NA11920,NA11931,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12006,NA12044,NA12154,NA12156,NA12234,NA12249,NA12287,NA12414,NA12716,NA12717,NA12749,NA12751,NA12761,NA12776,NA12812,NA12814,NA12815,NA12873,NA12874,NA12878,NA12891,NA12892,NA18498,NA18502,NA18510,NA18517,NA18523,NA18526,NA18532,NA18537,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18571,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18603,NA18608,NA18638,NA18870,NA18907,NA18909,NA18912,NA18916,NA18944,NA18945,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18970,NA19093,NA19114,NA19116,NA19138,NA19147,NA19225,NA19238,NA19239,NA19240 esv3437395 10 2067549 2067562 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946386,essv8946416,essv8946394,essv8946462,essv8946431,essv8946460,essv8946456,essv8946410,essv8946415,essv8946436,essv8946453,essv8946408,essv8946461,essv8946382,essv8946427,essv8946407,essv8946442,essv8946396,essv8946393,essv8946405,essv8946404,essv8946422,essv8946414,essv8946421,essv8946418,essv8946445,essv8946467,essv8946438,essv8946463,essv8946406,essv8946464,essv8946384,essv8946470,essv8946412,essv8946385,essv8946401,essv8946409,essv8946444,essv8946465,essv8946423,essv8946398,essv8946434,essv8946388,essv8946468,essv8946449,essv8946466,essv8946383,essv8946441,essv8946433,essv8946457,essv8946425,essv8946390,essv8946430,essv8946389,essv8946450,essv8946432,essv8946439,essv8946459,essv8946440,essv8946443,essv8946403,essv8946411,essv8946392,essv8946437,essv8946417,essv8946429,essv8946420,essv8946455,essv8946471,essv8946454,essv8946451,essv8946419,essv8946400,essv8946426,essv8946452,essv8946397,essv8946428,essv8946395,essv8946399,essv8946387,essv8946448 M 185 81 0 "" NA06986,NA07000,NA07037,NA07051,NA07346,NA07357,NA10847,NA10851,NA11831,NA11881,NA11918,NA11920,NA11931,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12006,NA12044,NA12154,NA12156,NA12249,NA12287,NA12414,NA12716,NA12717,NA12749,NA12751,NA12761,NA12776,NA18498,NA18502,NA18510,NA18517,NA18523,NA18526,NA18532,NA18537,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18571,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18603,NA18608,NA18638,NA18870,NA18907,NA18909,NA18912,NA18916,NA18944,NA18945,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA19093,NA19114,NA19116,NA19138,NA19147,NA19225 esv3306 10 2080877 2081202 CNV loss Wang_et_al_2008 18987735 Sequencing essv25747 M 1 0 1 "" YH esv275422 10 2081021 2085054 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586014 M 1250 0 1 "" nsv1052886 10 2100410 2138254 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502146 M 29084 0 1 MIR6072 nsv1045910 10 2100410 2383995 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490646 M 29084 1 0 LINC00701,MIR6072 nsv819947 10 2137250 2143239 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419750 M 2 0 1 "" AK1 nsv5576 10 2143855 2178421 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2819 M 9 1 0 "" NA18555 nsv1038386 10 2172085 2340894 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3498717 M 29084 0 1 LINC00701 nsv524643 10 2202037 2209930 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700609 M 2026 0 1 "" esv3309488 10 2230994 2230995 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840823,essv7840289,essv7841257 M 185 3 0 "" NA12878,NA12891,NA12892 esv3304108 10 2231001 2231002 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7792610,essv7810989,essv7826851,essv7773368,essv7815561,essv7836138,essv7779942,essv7779734,essv7835558,essv7823409,essv7798567,essv7814486,essv7823926,essv7781627,essv7803655,essv7829195,essv7790218,essv7798801,essv7774958,essv7783457,essv7808762,essv7779094,essv7782962,essv7821757,essv7807444,essv7794070,essv7817754,essv7790858,essv7784643,essv7833443,essv7808112,essv7809342,essv7793311,essv7773860,essv7800908,essv7834267,essv7822127,essv7802974,essv7824200,essv7795947,essv7787151,essv7787834,essv7827297,essv7799268 M 185 44 0 "" NA07000,NA07037,NA07346,NA11829,NA11830,NA11831,NA11919,NA11931,NA12003,NA12044,NA12154,NA12249,NA12287,NA12761,NA12874,NA12878,NA12891,NA12892,NA18526,NA18537,NA18542,NA18552,NA18561,NA18563,NA18564,NA18570,NA18572,NA18573,NA18576,NA18577,NA18582,NA18593,NA18605,NA18609,NA18638,NA18907,NA18940,NA18947,NA18949,NA18952,NA18956,NA18960,NA18961,NA19172 esv3354557 10 2231010 2231014 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946476,essv8946511,essv8946509,essv8946510,essv8946484,essv8946486,essv8946490,essv8946507,essv8946514,essv8946472,essv8946496,essv8946489,essv8946495,essv8946479,essv8946482,essv8946504,essv8946498,essv8946477,essv8946485,essv8946494,essv8946505,essv8946483,essv8946493,essv8946499,essv8946481,essv8946478,essv8946512,essv8946497,essv8946500,essv8946503,essv8946508,essv8946473,essv8946488,essv8946474,essv8946506,essv8946475,essv8946492,essv8946501,essv8946487 M 185 39 0 "" NA07000,NA07037,NA07346,NA11829,NA11830,NA11831,NA11919,NA12003,NA12044,NA12154,NA12249,NA12287,NA12761,NA18526,NA18537,NA18542,NA18552,NA18561,NA18563,NA18564,NA18570,NA18572,NA18573,NA18576,NA18577,NA18582,NA18593,NA18605,NA18609,NA18638,NA18907,NA18940,NA18947,NA18949,NA18952,NA18956,NA18960,NA18961,NA19172 esv3891739 10 2231511 2246452 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25801400 M 3017 0 1 "" esv1218731 10 2264558 2264614 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3652096 M 2 0 1 "" HuRef nsv831767 10 2265141 2425006 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448171 M 95 1 0 LINC00701 nsv947725 10 2267033 2267983 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1830604,nssv1830617,nssv1830577,nssv1830615,nssv1830574,nssv1830603,nssv1830602,nssv1830614,nssv1830587,nssv1830638,nssv1830594,nssv1830634,nssv1830648,nssv1830620,nssv1830583,nssv1830626,nssv1830650,nssv1830596,nssv1830590,nssv1830623,nssv1830588,nssv1830628,nssv1830593,nssv1830630,nssv1830591,nssv1830635,nssv1830575,nssv1830624,nssv1830651,nssv1830616,nssv1830592,nssv1830611,nssv1830645,nssv1830612,nssv1830605,nssv1830607,nssv1830646,nssv1830631,nssv1830601,nssv1830621,nssv1830586,nssv1830618,nssv1830595,nssv1830599,nssv1830582,nssv1830610,nssv1830647,nssv1830640,nssv1830649,nssv1830629,nssv1830643,nssv1830622,nssv1830579,nssv1830613,nssv1830580,nssv1830625,nssv1830652,nssv1830639,nssv1830576,nssv1830608,nssv1830585,nssv1830600,nssv1830598,nssv1830636,nssv1830589,nssv1830641,nssv1830578,nssv1830619,nssv1830597,nssv1830637,nssv1830644,nssv1830642,nssv1830584,nssv1830627,nssv1830581,nssv1830632,nssv1830633,nssv1830573,nssv1830606,nssv1830609 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1043468 10 2269963 2375804 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707666 M 29084 1 0 LINC00701 nsv1052783 10 2303902 2320989 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494091 M 29084 0 1 "" nsv831768 10 2310204 2531855 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448174,nssv1448173 M 95 2 0 LINC00701 nsv1045453 10 2320989 2368183 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489713 M 29084 0 1 LINC00701 nsv549799 10 2321425 2844697 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740233 M 17421 1 0 LINC00701 esv275503 10 2321993 2330038 CNV gain+loss Banerjee_et_al_2011 21479260 SNP array essv2586165,essv2586120 M 1250 1 1 "" esv992906 10 2323072 2323347 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579885 M 3 0 1 "" HuRef nsv825214 10 2347122 2347574 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437610 M 31 1 0 LINC00701 NA18949 esv1478303 10 2347342 2347342 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3948149 M 2 1 0 "" HuRef esv2408587 10 2349520 2349949 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv5001351 M 1 0 1 "" NA18507 esv2494507 10 2368765 2370390 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5305612 M 1 0 1 "" NA18507 esv1983085 10 2369279 2369997 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4591940 M 1 0 1 "" NA18507 esv4905 10 2369390 2369861 CNV loss Wang_et_al_2008 18987735 Sequencing essv27346 M 1 0 1 "" YH esv987891 10 2369470 2369796 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569181 M 3 0 1 "" HuRef esv1699688 10 2369486 2369813 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4112981 M 2 0 1 "" HuRef nsv1043887 10 2375804 2411536 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487376 M 29084 1 0 "" nsv479070 10 2393193 2393193 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013194 M 9 0 0 "" dgv659n100 10 2410840 2532839 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1049863,nsv1036274 M 29084 0 2 "" nsv549800 10 2414806 2537022 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740234 M 17421 0 1 "" dgv932n54 10 2414806 3285673 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549801,nsv549802 M 17421 2 0 PFKP,PITRM1,PITRM1-AS1 nsv509341 10 2423082 2427121 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620992 M 4 1 0 "" NA15510 esv2531822 10 2424167 2425239 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5196264 M 1 1 0 "" NA18507 nsv478709 10 2446809 2446809 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014239 M 9 1 0 "" NA18507 esv275498 10 2487637 2489126 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585450 M 1250 0 1 "" esv2180732 10 2509573 2510025 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4823708 M 1 0 1 "" NA18507 esv1007199 10 2509722 2509788 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3582274 M 3 0 1 "" HuRef esv1254576 10 2509788 2509855 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3624990 M 2 0 1 "" HuRef nsv5587 10 2520867 2565542 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8373 M 9 0 1 "" NA12156 esv25018 10 2533312 2534056 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12073 M 40 0 6 "" NA07037,NA11894,NA12239,NA12414,NA12828,NA12878 nsv25410 10 2533494 2533619 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43988 M 24 "" esv1001765 10 2533560 2533685 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583693 M 3 0 1 "" HuRef esv1256173 10 2533567 2533756 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4040758 M 2 0 1 "" HuRef esv1261776 10 2533903 2533903 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4064335 M 2 1 0 "" HuRef esv1653522 10 2534069 2534069 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3984276 M 2 1 0 "" HuRef esv2761564 10 2552267 2566950 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994392 M 1109 0 1 "" SW_0703 esv27117 10 2552864 2556440 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21147 M 40 0 2 "" NA12006,NA12414 esv1142745 10 2554694 2554812 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4326817 M 2 0 1 "" HuRef esv1554685 10 2558424 2558424 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3965136 M 2 1 0 "" HuRef esv3427042 10 2558425 2558425 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8810347 M 185 1 0 "" NA12878 esv1231033 10 2558748 2558748 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3754258 M 2 1 0 "" HuRef nsv527674 10 2573581 2583077 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704149 M 2026 1 0 "" nsv519975 10 2596931 2610997 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697158 M 2026 0 1 "" esv26762 10 2612300 2613852 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13727 M 40 0 1 "" NA19114 nsv516135 10 2613568 2617161 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv666429,nssv689657,nssv655547,nssv673017,nssv656385 M 2026 0 5 "" esv2759726 10 2650802 3188773 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2758208,esv2757361 M 270 1 0 PFKP,PITRM1,PITRM1-AS1 NA19201 nsv428229 10 2650802 3188773 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv451792,nssv451791 M 62 2 0 PFKP,PITRM1,PITRM1-AS1 HGDP00460,NA19147 nsv1051537 10 2658349 2934499 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501910 M 29084 1 0 "" nsv475658 10 2658532 2658532 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016340 M 9 1 0 "" NA12878 nsv517630 10 2664678 3129701 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv667337,nssv656112,nssv702153,nssv679577,nssv671462,nssv681418,nssv685475,nssv662458,nssv667044,nssv652592,nssv670928,nssv687391,nssv687253,nssv661593,nssv697914,nssv682637,nssv705918 M 2026 11 6 PFKP esv34832 10 2671064 3123648 CNV gain Pinto_et_al_2007 17911159 SNP array essv6980473,essv6985998,essv6980474,essv6990486,essv6985997 M 771 5 0 PFKP NA19201 esv2760124 10 2673239 3126717 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7018134,essv7018135 M 1109 2 0 PFKP RW_0008,RW_0524 dgv660n100 10 2673664 3124681 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1044605,nsv1035593,nsv1046501,nsv1043635,nsv1044287,nsv1054918,nsv1037173,nsv1049655,nsv1042698,nsv1041950,nsv1040966,nsv1053719,nsv1043848,nsv1052921 M 29084 25 0 PFKP esv3430988 10 2674166 2674203 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7864990 M 185 1 0 "" NA12005 dgv63n27 10 2676476 3123648 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466702,nsv466703,nsv466701,nsv466704 M 1557 4 0 PFKP HGDP00460,HGDP00632,HGDP00938,HGDP00940 dgv933n54 10 2676476 3123648 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549805,nsv549804,nsv549803 M 17421 3 0 PFKP HGDP00460,HGDP00632 esv26266 10 2678857 3124214 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15548,esv16519,esv17455,esv16140,esv20385,esv16419 M 40 2 5 PFKP NA06985,NA18511,NA18523,NA18858,NA18909,NA19147,NA19257 nsv470912 10 2682656 3123648 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544806,nssv544807,nssv544811,nssv544808,nssv544805 M 443 4 0 PFKP HGDP00460,HGDP00632,HGDP00938,HGDP00940 esv1499917 10 2699221 2699221 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4282066 M 2 1 0 "" HuRef esv3444676 10 2699224 2699224 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8811116 M 185 1 0 "" NA19240 esv2223304 10 2701793 2702203 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4830377 M 1 0 1 "" NA18507 esv3342142 10 2711256 2711266 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8671764,essv8671766,essv8671767 M 185 3 0 "" NA19238,NA19239,NA19240 esv3355939 10 2711261 2711273 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946589,essv8946575,essv8946584,essv8946594,essv8946561,essv8946576,essv8946564,essv8946580,essv8946562,essv8946569,essv8946582,essv8946597,essv8946572,essv8946587,essv8946583,essv8946563,essv8946565,essv8946560,essv8946566,essv8946588,essv8946577,essv8946578,essv8946585,essv8946590,essv8946573,essv8946571,essv8946579,essv8946574,essv8946593,essv8946567,essv8946586,essv8946591,essv8946595,essv8946568,essv8946596 M 185 35 0 "" NA12006,NA12043,NA12287,NA12489,NA12751,NA18502,NA18505,NA18526,NA18532,NA18537,NA18550,NA18555,NA18561,NA18563,NA18564,NA18566,NA18571,NA18572,NA18576,NA18603,NA18605,NA18638,NA18870,NA18907,NA18916,NA18940,NA18942,NA18944,NA18949,NA18952,NA18956,NA18959,NA18973,NA19093,NA19114 nsv466706 10 2741062 2828853 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542184 M 1557 0 1 "" HGDP00773 nsv549806 10 2741062 2828853 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174100 M 17421 0 1 "" HGDP00773 dgv64n27 10 2773142 2794109 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466707,nsv466708 M 1557 0 2 "" NINDS_103,NINDS_95 dgv934n54 10 2773142 2794109 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549807,nsv549808 M 17421 0 2 "" NINDS_103,NINDS_95 nsv1036115 10 2788314 2819929 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483008 M 29084 0 1 "" nsv437093 10 2819929 2839913 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466974 M 60 0 1 "" NA07348 esv2761565 10 2876056 2995620 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6994393 M 1109 1 0 "" SW_0118 esv1253819 10 2939303 2939303 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4025762 M 2 1 0 "" HuRef esv3304493 10 2972575 2972576 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759823,essv7744098,essv7756064 M 185 3 0 "" NA18510,NA18870,NA19172 esv3429872 10 2972578 2972630 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946598,essv8946600,essv8946599 M 185 3 0 "" NA18510,NA18870,NA19172 nsv25275 10 2981380 2981433 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43853 M 24 "" esv33607 10 2990878 2996081 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv98517 M 51 1 0 "" 22352 esv1009800 10 3033846 3034490 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3587041 M 3 0 1 "" HuRef nsv466709 10 3042436 3085281 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542187 M 1557 0 1 "" NINDS_197 nsv549809 10 3042436 3085281 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174103 M 17421 0 1 "" NINDS_197 nsv549810 10 3067464 3723386 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740238 M 17421 1 0 PFKP,PITRM1,PITRM1-AS1 esv997139 10 3073498 3078085 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565732 M 3 1 0 "" HuRef esv3392513 10 3073752 3073771 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9645614 M 185 1 0 "" NA11931 dgv935n54 10 3076486 3157463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549811,nsv549813,nsv549812 M 17421 0 3 PFKP HGDP00465,HGDP00466,HGDP01085 esv993380 10 3080721 3080794 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570351 M 3 0 1 "" HuRef esv1355832 10 3080786 3080860 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3930063 M 2 0 1 "" HuRef esv3891740 10 3085046 3090436 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796624 M 3017 0 1 "" esv2522530 10 3085135 3086770 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5175040 M 1 0 1 "" NA18507 nsv470913 10 3085185 3157463 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544813,nssv544812,nssv544814 M 443 0 3 PFKP HGDP00465,HGDP00466,HGDP01085 esv2254237 10 3085544 3086121 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4522895 M 1 0 1 "" NA18507 esv8640 10 3085580 3086070 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31081 M 1 0 0 "" esv5338 10 3085670 3086092 CNV loss Wang_et_al_2008 18987735 Sequencing essv27779 M 1 0 1 "" YH esv1763951 10 3085765 3085999 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3930565 M 2 0 1 "" HuRef nsv549814 10 3087212 3202425 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740239 M 17421 0 1 PFKP,PITRM1,PITRM1-AS1 nsv825215 10 3090850 3131428 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1441258 M 31 1 0 PFKP NA18969 esv2092770 10 3092972 3093693 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4614088 M 1 0 1 "" NA18507 esv7932 10 3092987 3093722 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30373 M 1 0 0 "" nsv8595 10 3098962 3102529 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21351,nssv19508,nssv16541,nssv19029,nssv18468,nssv18963 M 31 6 0 PFKP NA07048,NA12155,NA12740,NA12872,NA18564,NA18860 nsv549815 10 3108631 3117979 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740240 M 17421 1 0 PFKP nsv549816 10 3108631 3123648 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740241 M 17421 1 0 PFKP nsv507530 10 3113018 3119018 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620591 M 4 0 0 PFKP NA15510 nsv549817 10 3113433 3117979 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740242 M 17421 1 0 PFKP nsv549818 10 3113433 3259317 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740243 M 17421 1 0 PFKP,PITRM1,PITRM1-AS1 nsv549819 10 3114516 3117495 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740244 M 17421 0 1 PFKP dgv936n54 10 3117075 3117728 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549830,nsv549821 M 17421 3 0 PFKP dgv937n54 10 3117075 3117784 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549820,nsv549838,nsv549837,nsv549836,nsv549841 M 17421 0 11 PFKP dgv938n54 10 3117075 3117979 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549823,nsv549825,nsv549824,nsv549826,nsv549822,nsv549831,nsv549834 M 17421 126 35 PFKP nsv549827 10 3117075 3119472 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740417,nssv740416,nssv740405,nssv740415,nssv740407,nssv740406,nssv740408,nssv740414,nssv740410,nssv740409,nssv740413,nssv740411,nssv740412,nssv740418 M 17421 14 0 PFKP dgv939n54 10 3117075 3124681 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549829,nsv549828,nsv549835,nsv549849 M 17421 18 0 PFKP esv1312745 10 3117089 3117404 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4186711 M 2 0 1 PFKP HuRef dgv940n54 10 3117127 3117979 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549832,nsv549839,nsv549846,nsv549847 M 17421 0 7 PFKP dgv941n54 10 3117127 3117979 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549833,nsv549840 M 17421 2 0 PFKP dgv942n54 10 3117229 3117901 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549843,nsv549842,nsv549845,nsv549844 M 17421 0 5 PFKP nsv549848 10 3117437 3117979 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740467,nssv740466,nssv740465 M 17421 2 1 PFKP nsv549850 10 3117495 3117979 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740469,nssv740472,nssv740470,nssv740471,nssv740473,nssv740474,nssv740475 M 17421 0 7 PFKP dgv943n54 10 3117675 3117955 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549853,nsv549851 M 17421 0 2 PFKP nsv549852 10 3117728 3117901 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740477 M 17421 0 1 PFKP esv2750891 10 3131086 3196365 CNV loss Pinto_et_al_2007 17911159 SNP array essv6983865,essv6983864,essv6983863 M 771 0 3 PFKP,PITRM1,PITRM1-AS1 BEC_727 nsv516811 10 3140314 3145790 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv663438,nssv671083,nssv691864,nssv695303 M 2026 0 4 PFKP esv3447223 10 3142752 3143650 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8688002 M 185 1 0 PFKP NA19240 esv2403236 10 3147297 3147657 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4527431 M 1 0 1 PFKP NA18507 esv28525 10 3153069 3155871 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15272 M 40 0 1 PFKP NA19114 nsv8596 10 3153427 3156558 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21833,nssv17786 M 31 0 2 PFKP NA18972,NA19007 nsv516917 10 3155316 3157463 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv691215,nssv683158,nssv676842,nssv690234,nssv654985 M 2026 0 5 PFKP nsv525229 10 3155316 3159771 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701318 M 2026 0 1 PFKP nsv1039231 10 3163338 3768825 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500935,nssv3493527 M 29084 0 2 PFKP,PITRM1,PITRM1-AS1 nsv1044106 10 3168881 3219073 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500027 M 29084 0 1 PFKP,PITRM1,PITRM1-AS1 nsv466711 10 3191072 3395527 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542188 M 1557 1 0 PITRM1 HGDP01030 nsv549854 10 3191072 3395527 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174107 M 17421 1 0 PITRM1 HGDP01030 nsv524854 10 3194561 3220337 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700857 M 2026 1 0 PITRM1 nsv470914 10 3194561 3395527 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544815 M 443 1 0 PITRM1 HGDP01030 dgv35n21 10 3197632 3259317 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv523645,nsv522065,nsv523100 M 2026 3 0 PITRM1 esv33742 10 3198223 3292032 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv95804 M 51 1 0 PITRM1 21911 nsv1049853 10 3218605 3246587 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492255 M 29084 0 1 "" nsv1036245 10 3218605 3317931 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3483489 M 29084 1 0 "" nsv1041024 10 3218605 3564404 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486721 M 29084 1 0 "" esv2094158 10 3247994 3248407 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4572522 M 1 0 1 "" NA18507 esv5248 10 3248101 3248320 CNV loss Wang_et_al_2008 18987735 Sequencing essv27689 M 1 0 1 "" YH esv1002468 10 3248113 3248187 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572894 M 3 0 1 "" HuRef nsv25143 10 3248114 3248188 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43721 M 24 "" esv1675339 10 3248207 3248282 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4281142 M 2 0 1 "" HuRef nsv24549 10 3248231 3248305 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43127 M 24 "" nsv1051416 10 3287282 3298002 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707667 M 29084 0 1 "" esv2759727 10 3297225 3300298 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757362 M 270 0 1 "" NA11831 nsv523637 10 3297225 3300566 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699437 M 2026 0 1 "" nsv524242 10 3300566 3321092 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700132 M 2026 0 1 "" nsv831769 10 3336707 3494942 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448175 M 95 0 1 "" dgv353e59 10 3346052 3347550 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3412651,esv3390910,esv3337297 M 185 3 0 "" NA12878,NA12891,NA12892 esv27266 10 3346310 3347470 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17871 M 40 0 1 "" NA19240 nsv25168 10 3347111 3347253 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43746 M 24 "" esv1681309 10 3347418 3347418 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4338763 M 2 1 0 "" HuRef esv1512000 10 3350367 3350436 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3671237 M 2 0 1 "" HuRef esv1607258 10 3350457 3350525 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3720811 M 2 0 1 "" HuRef nsv472798 10 3358752 3358752 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010867 M 9 1 0 "" NA18555 esv3361151 10 3374148 3374184 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946601,essv8946602 M 185 2 0 "" NA18523,NA18861 esv3304849 10 3374157 3374158 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7754723,essv7754885 M 185 2 0 "" NA18523,NA18861 nsv25305 10 3405454 3405535 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43883 M 24 "" nsv5598 10 3418575 3438792 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3857 M 9 1 0 "" NA12878 esv2183577 10 3439052 3439468 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4596629 M 1 0 1 "" NA18507 esv1369919 10 3439261 3439312 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4011011 M 2 0 1 "" HuRef nsv25192 10 3439262 3439312 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43770 M 24 "" esv2630414 10 3443271 3443714 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5298096 M 1 1 0 "" NA18507 esv3389143 10 3443436 3443734 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8651782 M 185 1 0 "" NA19240 esv1643118 10 3443460 3443460 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4135349 M 2 1 0 "" HuRef esv2432419 10 3462876 3463618 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5388184 M 1 1 0 "" NA18507 nsv831771 10 3483567 3658824 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448176 M 95 1 0 "" esv2114934 10 3489799 3490227 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4713220 M 1 0 1 "" NA18507 esv995749 10 3490481 3490572 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580671 M 3 0 1 "" HuRef esv1090591 10 3490489 3490581 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3927208 M 2 0 1 "" HuRef esv3440504 10 3515847 3515847 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8811134 M 185 1 0 "" NA19240 esv1001593 10 3559007 3559007 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570872 M 3 1 0 "" HuRef esv3436376 10 3559012 3559024 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946629,essv8946640,essv8946646,essv8946656,essv8946662,essv8946638,essv8946655,essv8946608,essv8946683,essv8946610,essv8946626,essv8946678,essv8946618,essv8946679,essv8946667,essv8946637,essv8946621,essv8946635,essv8946611,essv8946659,essv8946657,essv8946639,essv8946666,essv8946642,essv8946649,essv8946634,essv8946668,essv8946630,essv8946644,essv8946680,essv8946632,essv8946648,essv8946684,essv8946674,essv8946609,essv8946664,essv8946619,essv8946675,essv8946676,essv8946631,essv8946604,essv8946682,essv8946624,essv8946622,essv8946665,essv8946615,essv8946663,essv8946671,essv8946650,essv8946606,essv8946651,essv8946623,essv8946617,essv8946641,essv8946645,essv8946612,essv8946627,essv8946616,essv8946613,essv8946661,essv8946652,essv8946653,essv8946672,essv8946677,essv8946643,essv8946628,essv8946607,essv8946605,essv8946673,essv8946654,essv8946620,essv8946633,essv8946660 M 185 73 0 "" NA06986,NA07000,NA07037,NA07051,NA07347,NA07357,NA10847,NA10851,NA11830,NA11831,NA11881,NA11894,NA11918,NA11919,NA11920,NA11931,NA11992,NA11993,NA11994,NA11995,NA12003,NA12043,NA12044,NA12045,NA12144,NA12154,NA12249,NA12414,NA12489,NA12716,NA12717,NA12749,NA12750,NA12751,NA12763,NA12776,NA12828,NA18489,NA18502,NA18519,NA18523,NA18526,NA18537,NA18547,NA18550,NA18552,NA18555,NA18558,NA18563,NA18566,NA18571,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18605,NA18609,NA18853,NA18870,NA18871,NA18907,NA18940,NA18942,NA18944,NA18948,NA18949,NA18959,NA18960,NA18961,NA18964,NA19108 esv2650993 10 3563569 3566045 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5291741 M 1 0 1 "" NA18507 esv25351 10 3563693 3565449 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20158,esv11830 M 40 0 3 "" NA18523,NA18861,NA18916 esv1979273 10 3564035 3565567 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4830216 M 1 0 1 "" NA18507 nsv466712 10 3605831 3656716 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542189 M 1557 0 1 "" HGDP00185 nsv549855 10 3605831 3656716 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174108 M 17421 0 1 "" HGDP00185 nsv825216 10 3617307 3621267 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434567 M 31 0 1 "" NA18570 nsv975790 10 3617510 3621885 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2756864 M 97 0 1 "" HGDP00778 nsv510209 10 3688472 3694472 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618323 M 4 0 0 "" CHM nsv521412 10 3698015 3700626 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694443 M 2026 0 1 "" nsv522710 10 3709164 3714611 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv706122 M 2026 0 1 "" esv2189433 10 3711378 3711809 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4632070 M 1 0 1 "" NA18507 esv1006285 10 3711549 3711607 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3582480 M 3 0 1 "" HuRef esv1364374 10 3711561 3711620 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3661198 M 2 0 1 "" HuRef nsv24788 10 3711691 3711751 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43366 M 24 "" nsv517787 10 3781224 3791413 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682513,nssv693658,nssv690786,nssv683478,nssv664939,nssv673121,nssv657435,nssv661556,nssv683532,nssv688601,nssv667115,nssv689113,nssv677080,nssv667875,nssv680852,nssv667357,nssv686330,nssv680762,nssv653254,nssv679265,nssv670115,nssv656628,nssv686972 M 2026 0 23 "" dgv661n100 10 3782130 3820207 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1048831,nsv1035650 M 29084 2 0 KLF6 nsv528577 10 3851214 3851344 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705196 M 2026 0 1 "" nsv549856 10 3851214 3857802 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740479 M 17421 0 1 "" esv3891741 10 3851214 3859098 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779801 M 3017 0 1 "" nsv24874 10 3859411 3859477 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43452 M 24 "" nsv507531 10 3904172 3910172 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619114,nssv622823,nssv620623 M 4 0 0 "" NA10860,NA15510,NA18994 esv2761567 10 3936610 3939166 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994394 M 1109 0 1 "" SW_0004 nsv549857 10 3936661 3939085 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740480 M 17421 0 1 "" esv1153252 10 3962612 3962612 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3780401 M 2 1 0 "" HuRef nsv24718 10 3977604 3981658 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43296 M 24 "" nsv5609 10 3992849 4030114 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8379 M 9 0 1 MIR6078 NA12156 esv2401106 10 4008333 4008766 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4796897 M 1 0 1 "" NA18507 nsv831772 10 4029292 4202218 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448177 M 95 1 0 "" esv2762838 10 4038172 4044844 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7018136 M 1109 0 1 "" RW_0323 esv3429575 10 4215892 4215911 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8677682 M 185 1 0 "" NA19240 esv3308603 10 4215901 4215902 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841834,essv7843180 M 185 2 0 "" NA19239,NA19240 esv3325142 10 4215902 4215908 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8671805,essv8671806 M 185 2 0 "" NA19239,NA19240 esv3327328 10 4215911 4215940 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946686,essv8946687,essv8946685,essv8946689,essv8946688 M 185 5 0 "" NA18505,NA18507,NA18510,NA18912,NA19129 esv275205 10 4230870 4233998 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585516 M 1250 0 1 "" dgv662n100 10 4261872 4296798 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1053322,nsv1044535 M 29084 3 0 LINC00702 nsv1051538 10 4264395 4281004 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3501911 M 29084 1 0 LINC00702 dgv663n100 10 4276880 4301792 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1036103,nsv1052378,nsv1043787 M 29084 3 0 "" esv2759728 10 4276880 4313493 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757363 M 270 0 1 "" NA11992 nsv549858 10 4279489 4281584 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740483,nssv740482,nssv740481 M 17421 0 3 "" nsv8597 10 4279599 4282525 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv20251,nssv21381,nssv18320,nssv20158 M 31 4 0 "" NA18853,NA18860,NA19144,NA19240 nsv511452 10 4279738 4284071 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626065 M 1 0 1 "" 1 esv7613 10 4279832 4281914 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30054 M 1 0 0 "" nsv512139 10 4279921 4281859 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624700 M 1 0 1 "" 1 nsv825217 10 4279974 4281125 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1432239 M 31 0 1 "" AK20 dgv121n67 10 4279974 4281825 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825218,nsv825219 M 31 0 28 "" AK10,AK12,AK14,AK16,AK18,AK2,AK4,AK6,AK8,NA18526,NA18537,NA18542,NA18552,NA18564,NA18566,NA18570,NA18582,NA18592,NA18942,NA18947,NA18949,NA18951,NA18968,NA18969,NA18972,NA18973,NA18997,NA18999 nsv821193 10 4279974 4281825 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420845 M 1 0 1 "" NA10851 esv3803 10 4280012 4281758 CNV loss Wang_et_al_2008 18987735 Sequencing essv26244 M 1 0 1 "" YH esv1619476 10 4280063 4281683 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3644864 M 2 0 1 "" HuRef esv27149 10 4280100 4281628 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10557 M 40 25 0 "" NA07037,NA11995,NA12004,NA12287,NA12489,NA12776,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 dgv944n54 10 4280129 4281522 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549861,nsv549859 M 17421 2 0 "" nsv549860 10 4280129 4281584 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv740866,nssv742054,nssv740842,nssv740848,nssv740821,nssv741541,nssv740884,nssv740781,nssv740765,nssv740862,nssv741908,nssv741895,nssv741893,nssv740843,nssv740857,nssv740873,nssv740916,nssv740865,nssv740764,nssv740863,nssv741540,nssv740864,nssv741883,nssv741889,nssv740751,nssv740872,nssv740756,nssv741892,nssv740868,nssv741890,nssv741891,nssv740871,nssv740867,nssv740870,nssv740869,nssv741894,nssv740883,nssv740783,nssv740763,nssv740877,nssv740782,nssv740876,nssv740875,nssv740785,nssv740874,nssv740879,nssv740882,nssv740878,nssv740881,nssv740880,nssv740898,nssv740777,nssv740885,nssv741897,nssv740890,nssv740780,nssv740784,nssv741904,nssv740889,nssv741896,nssv740886,nssv741907,nssv740915,nssv740888,nssv740887,nssv740891,nssv740776,nssv740893,nssv740897,nssv740894,nssv741900,nssv741903,nssv741901,nssv740892,nssv741899,nssv741898,nssv740896,nssv740775,nssv740895,nssv741902,nssv741905,nssv741906,nssv740914,nssv740900,nssv740907,nssv740899,nssv740779,nssv740906,nssv740901,nssv740902,nssv740904,nssv740903,nssv740905,nssv740913,nssv740909,nssv740908,nssv740778,nssv740912,nssv740910,nssv740911,nssv740788,nssv741923,nssv740919,nssv740925,nssv740918,nssv741391,nssv741909,nssv740917,nssv740803,nssv741410,nssv740802,nssv740920,nssv741946,nssv740787,nssv740786,nssv741912,nssv741911,nssv741915,nssv740924,nssv741910,nssv741913,nssv740921,nssv741947,nssv741914,nssv740922,nssv740923,nssv741918,nssv741917,nssv740790,nssv740789,nssv741916,nssv741922,nssv740927,nssv740928,nssv740926,nssv740949,nssv740950,nssv740935,nssv740934,nssv740930,nssv740929,nssv740933,nssv740931,nssv740932,nssv740941,nssv741919,nssv740936,nssv740948,nssv741921,nssv740939,nssv740940,nssv740938,nssv740937,nssv741920,nssv740947,nssv740946,nssv740945,nssv740944,nssv740942,nssv740943,nssv741024,nssv740963,nssv740951,nssv741925,nssv741929,nssv741924,nssv741166,nssv740801,nssv741945,nssv740952,nssv740794,nssv741928,nssv740983,nssv740962,nssv741926,nssv740793,nssv740955,nssv740954,nssv740953,nssv740792,nssv741927,nssv740981,nssv740960,nssv740961,nssv740959,nssv740982,nssv740791,nssv740957,nssv740958,nssv740956,nssv741930,nssv740964,nssv741944,nssv741934,nssv740980,nssv740968,nssv740795,nssv740800,nssv741933,nssv740967,nssv740965,nssv741931,nssv741932,nssv740966,nssv740970,nssv740799,nssv741935,nssv740969,nssv740979,nssv741937,nssv740973,nssv741943,nssv740972,nssv741936,nssv740971,nssv741939,nssv740798,nssv740974,nssv741938,nssv741942,nssv740978,nssv740797,nssv741941,nssv740977,nssv741940,nssv740975,nssv740796,nssv740976,nssv741350,nssv742053,nssv741948,nssv742001,nssv740847,nssv741967,nssv741955,nssv740815,nssv741409,nssv740841,nssv740819,nssv741374,nssv741352,nssv740844,nssv741954,nssv741949,nssv740984,nssv741953,nssv741951,nssv741950,nssv741952,nssv741349,nssv740804,nssv741962,nssv741023,nssv741957,nssv741956,nssv741005,nssv740985,nssv740820,nssv740989,nssv740990,nssv741351,nssv740986,nssv741961,nssv741966,nssv741958,nssv741960,nssv741959,nssv741965,nssv741344,nssv740805,nssv741348,nssv741963,nssv740988,nssv740987,nssv741964,nssv741345,nssv741346,nssv741347,nssv740991,nssv740992,nssv741357,nssv741356,nssv741973,nssv740818,nssv740814,nssv741362,nssv740807,nssv741355,nssv741371,nssv741972,nssv741373,nssv741361,nssv740997,nssv742000,nssv741985,nssv741969,nssv741354,nssv741968,nssv741971,nssv741004,nssv741353,nssv741970,nssv740996,nssv740993,nssv740806,nssv741984,nssv741360,nssv741977,nssv741983,nssv741358,nssv741359,nssv741975,nssv741974,nssv740995,nssv741976,nssv741979,nssv741978,nssv740994,nssv741982,nssv741980,nssv741981,nssv741993,nssv741987,nssv741364,nssv741370,nssv741986,nssv741999,nssv741363,nssv741372,nssv740808,nssv741003,nssv741000,nssv741992,nssv740813,nssv740809,nssv741991,nssv740998,nssv740817,nssv740999,nssv741989,nssv741990,nssv741988,nssv740816,nssv740810,nssv741001,nssv740812,nssv741994,nssv741002,nssv741998,nssv741369,nssv741367,nssv741997,nssv741368,nssv741995,nssv741365,nssv741366,nssv741996,nssv740811,nssv741381,nssv740840,nssv742008,nssv741388,nssv741383,nssv742004,nssv740830,nssv741006,nssv742025,nssv741011,nssv741393,nssv742003,nssv742052,nssv740846,nssv742002,nssv741408,nssv742006,nssv741382,nssv742007,nssv741380,nssv740829,nssv742005,nssv741022,nssv741375,nssv741378,nssv741379,nssv741376,nssv741377,nssv740825,nssv740822,nssv740828,nssv741392,nssv742024,nssv742012,nssv741387,nssv742009,nssv741384,nssv742011,nssv741010,nssv742010,nssv740824,nssv740823,nssv740826,nssv742023,nssv742015,nssv741008,nssv741385,nssv741386,nssv741009,nssv741007,nssv740827,nssv741389,nssv742014,nssv741390,nssv742013,nssv742016,nssv742018,nssv742022,nssv742021,nssv742017,nssv742020,nssv742019,nssv741394,nssv741016,nssv741407,nssv740833,nssv742033,nssv740845,nssv742051,nssv740839,nssv741021,nssv741396,nssv742027,nssv740832,nssv742026,nssv741395,nssv742030,nssv742029,nssv742028,nssv742032,nssv741015,nssv742031,nssv741013,nssv741014,nssv741012,nssv740831,nssv742037,nssv741406,nssv741401,nssv742050,nssv742039,nssv740837,nssv742036,nssv742035,nssv742034,nssv742038,nssv74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769,nssv741770,nssv741780,nssv740543,nssv741309,nssv740745,nssv740556,nssv740542,nssv741775,nssv740541,nssv741776,nssv740546,nssv740557,nssv741779,nssv740589,nssv740544,nssv740545,nssv741778,nssv740549,nssv740554,nssv740547,nssv740550,nssv740555,nssv740548,nssv740553,nssv740552,nssv741777,nssv740551,nssv740573,nssv740560,nssv740742,nssv741784,nssv741803,nssv740559,nssv741783,nssv740588,nssv741782,nssv741792,nssv741311,nssv740558,nssv741316,nssv740562,nssv741791,nssv740561,nssv740572,nssv740565,nssv740566,nssv740563,nssv740564,nssv741790,nssv740571,nssv741785,nssv741786,nssv740570,nssv741789,nssv740567,nssv741787,nssv740569,nssv741788,nssv740568,nssv740579,nssv741802,nssv740587,nssv741795,nssv741793,nssv740739,nssv741315,nssv740741,nssv741312,nssv741794,nssv740738,nssv740578,nssv740577,nssv740576,nssv740574,nssv740575,nssv740583,nssv741796,nssv740586,nssv741314,nssv740582,nssv740580,nssv740740,nssv740581,nssv741797,nssv741313,nssv741801,nssv741799,nssv741798,nssv741800,nssv740585,nssv740584,nssv740768,nssv741327,nssv741830,nssv740613,nssv740643,nssv740754,nssv740702,nssv741812,nssv741319,nssv740599,nssv740859,nssv741323,nssv740772,nssv740753,nssv740598,nssv741811,nssv741341,nssv741862,nssv741886,nssv741806,nssv740597,nssv740591,nssv740592,nssv740593,nssv741810,nssv740596,nssv741808,nssv740595,nssv741809,nssv740594,nssv741807,nssv741320,nssv741819,nssv740760,nssv740752,nssv740600,nssv741322,nssv741818,nssv740612,nssv741817,nssv741813,nssv741815,nssv741816,nssv741814,nssv741321,nssv740611,nssv740603,nssv740602,nssv740601,nssv741821,nssv740606,nssv741829,nssv740605,nssv741827,nssv740610,nssv741820,nssv740604,nssv741828,nssv741823,nssv740607,nssv740609,nssv741826,nssv741822,nssv740608,nssv741825,nssv741824,nssv740642,nssv740614,nssv740624,nssv741861,nssv741831,nssv741839,nssv741832,nssv740750,nssv741326,nssv740616,nssv741835,nssv741834,nssv740615,nssv741833,nssv740623,nssv741837,nssv740622,nssv741838,nssv741836,nssv740621,nssv740620,nssv740617,nssv740619,nssv740618,nssv741850,nssv740641,nssv740631,nssv741325,nssv740749,nssv741860,nssv741842,nssv741841,nssv741840,nssv740628,nssv741844,nssv741849,nssv741843,nssv740626,nssv740630,nssv740627,nssv740625,nssv741848,nssv740629,nssv741845,nssv741847,nssv741846,nssv741854,nssv741324,nssv741859,nssv740640,nssv740634,nssv741851,nssv741853,nssv740633,nssv741852,nssv740632,nssv741855,nssv741858,nssv740639,nssv740638,nssv741857,nssv740636,nssv740635,nssv741856,nssv740637,nssv740670,nssv740771,nssv741884,nssv740651,nssv741340,nssv740769,nssv741332,nssv741328,nssv741329,nssv740701,nssv741867,nssv741880,nssv740645,nssv741866,nssv740646,nssv741865,nssv741863,nssv740644,nssv741864,nssv741879,nssv740647,nssv741885,nssv741869,nssv740650,nssv741868,nssv741875,nssv740649,nssv740648,nssv741870,nssv741871,nssv741878,nssv741872,nssv741874,nssv741877,nssv741873,nssv741876,nssv741881,nssv741331,nssv741882,nssv740652,nssv741330,nssv740653,nssv740661,nssv740759,nssv740660,nssv740656,nssv740655,nssv740654,nssv740659,nssv740658,nssv740657,nssv740668,nssv740665,nssv740662,nssv740669,nssv740664,nssv740663,nssv740667,nssv740666,nssv741334,nssv741339,nssv740770,nssv741337,nssv740672,nssv740758,nssv740671,nssv741333,nssv740755,nssv741336,nssv740674,nssv740673,nssv740681,nssv740675,nssv741335,nssv740679,nssv740676,nssv740680,nssv740677,nssv740678,nssv740700,nssv740682,nssv741338,nssv740757,nssv740699,nssv740685,nssv740687,nssv740686,nssv740684,nssv740683,nssv740698,nssv740690,nssv740693,nssv740689,nssv740688,nssv740691,nssv740692,nssv740697,nssv740696,nssv740695,nssv740694 M 17421 4 1682 "" nsv514556 10 4280174 4281552 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2770079,nssv2770524,nssv2773848,nssv2773671,nssv2770700,nssv2774737,nssv2771108,nssv2774566,nssv2778124,nssv2778428,nssv2769088,nssv2778187,nssv2770902,nssv2769483,nssv2776562,nssv2772001,nssv2774328,nssv2772978,nssv2772546,nssv2772567,nssv2774983,nssv2775508,nssv2773123,nssv2778163,nssv2777880,nssv2774848,nssv2768733,nssv2773142,nssv2772074,nssv2777887,nssv2772292,nssv2773794,nssv2769161,nssv2769519,nssv2769823,nssv2772215,nssv2769710,nssv2777700,nssv2771916,nssv2778104,nssv2776189,nssv2778229,nssv2772869,nssv2777632,nssv2773623,nssv2773596,nssv2768633,nssv2769002,nssv2777248,nssv2771918,nssv2774433,nssv2771780,nssv2772067,nssv2772281,nssv2773966,nssv2778017,nssv2777216,nssv2774311,nssv2775568,nssv2775441,nssv2772007,nssv2772652,nssv2778219,nssv2770628,nssv2769811,nssv2774596,nssv2770561,nssv2771407,nssv2778164,nssv2772789,nssv2774125,nssv2776939,nssv2770483,nssv2778322,nssv2774868,nssv2769387,nssv2772174,nssv2770039,nssv2770888,nssv2771765,nssv2771824,nssv2774924,nssv2773333,nssv2773887,nssv2771929,nssv2768828,nssv2770009,nssv2773118,nssv2776405,nssv2769378,nssv2770960,nssv2770076,nssv2775962,nssv2770543,nssv2769147,nssv2773742,nssv2772525,nssv2776419,nssv2773784,nssv2776141,nssv2772447,nssv2771111,nssv2774086,nssv2776214,nssv2773044,nssv2776255,nssv2778208,nssv2774653,nssv2768962,nssv2774806,nssv2777367,nssv2771293,nssv2778466,nssv2775179,nssv2773743,nssv2773401,nssv2773238,nssv2771039,nssv2771046,nssv2770674,nssv2775550,nssv2772964,nssv2773143,nssv2778431,nssv2778101,nssv2774472,nssv2769165,nssv2772903,nssv2776256,nssv2771812,nssv2775887,nssv2769708,nssv2773991,nssv2769848,nssv2769970,nssv2777287,nssv2776014,nssv2769324,nssv2771503,nssv2773710,nssv2777557,nssv2774516,nssv2777767,nssv2771354,nssv2776511,nssv2777226,nssv2768947,nssv2768550,nssv2769199,nssv2778377,nssv2771159,nssv2773986,nssv2776683,nssv2776000,nssv2774989,nssv2774904,nssv2775050,nssv2778026,nssv2768822,nssv2771828,nssv2775092,nssv2768691,nssv2777794,nssv2773308,nssv2776116,nssv2776893,nssv2776648,nssv2774189,nssv2770606,nssv2777150,nssv2770256,nssv2775720,nssv2775975,nssv2778419,nssv2776655,nssv2772121,nssv2772103,nssv2769890,nssv2774243,nssv2774640,nssv2770718,nssv2771949,nssv2776024,nssv2771131,nssv2778218,nssv2778047,nssv2773439,nssv2776600,nssv2769429,nssv2772584,nssv2770792,nssv2774279,nssv2778443,nssv2772223,nssv2775934,nssv2773341,nssv2771981,nssv2772524,nssv2775273,nssv2771050,nssv2775792,nssv2775436,nssv2777193,nssv2772286,nssv2770994,nssv2773913,nssv2769195,nssv2769077,nssv2769451,nssv2771544,nssv2774709,nssv2770970,nssv2772195,nssv2770451,nssv2777331,nssv2772471,nssv2773676,nssv2777081,nssv2770775,nssv2774436,nssv2777760,nssv2769377,nssv2776321,nssv2770813,nssv2770821,nssv2768509,nssv2774722,nssv2774485,nssv2772739,nssv2776426,nssv2777528,nssv2773255,nssv2773859,nssv2773761,nssv2778194,nssv2775728,nssv2771365,nssv2769504,nssv2777415,nssv2778077,nssv2772446,nssv2775698,nssv2769363,nssv2774537,nssv2769920,nssv2775465,nssv2770810,nssv2777408,nssv2772960,nssv2772810,nssv2773403,nssv2773471,nssv2775531,nssv2771839,nssv2776934,nssv2776735,nssv2775114,nssv2774080,nssv2775287,nssv2772745,nssv2774710,nssv2770034,nssv2770189,nssv2772151,nssv2777558,nssv2778157,nssv2777299,nssv2773573,nssv2776668,nssv2769141,nssv2771494,nssv2775103,nssv2774277,nssv2778179,nssv2775035,nssv2768913,nssv2776265,nssv2768591,nssv2775551,nssv2776906,nssv2769957,nssv2770644,nssv2775951,nssv2777732,nssv2773910,nssv2772450,nssv2778113,nssv2775687,nssv2775567,nssv2768667,nssv2772408,nssv2775415,nssv2774479,nssv2776271,nssv2769452,nssv2777656,nssv2777192,nssv2769538,nssv2772192,nssv2773126,nssv2772564,nssv2777290,nssv2768953,nssv2773225,nssv2774500,nssv2777510,nssv2775915,nssv2774046,nssv2772419,nssv2776881,nssv2777684,nssv2775621,nssv2773108,nssv2772226,nssv2768565,nssv2770265,nssv2778375,nssv2770271,nssv2771357,nssv2768640,nssv2776659,nssv2776542,nssv2775251,nssv2771000,nssv2769054,nssv2775894,nssv2771290,nssv2778317,nssv2775872,nssv2775979,nssv2775073,nssv2776445,nssv2771320,nssv2777074,nssv2774486,nssv2775844,nssv2769465,nssv2775191,nssv2771295,nssv2777796,nssv2768579,nssv2769956,nssv2774333,nssv2770046,nssv2775561,nssv2770024,nssv2774550,nssv2778400,nssv2775188,nssv2777653,nssv2775102,nssv2777427,nssv2776210,nssv2769370,nssv2776401,nssv2775266,nssv2771694,nssv2768922,nssv2772667,nssv2776729,nssv2776136,nssv2774574,nssv2772781,nssv2768917,nssv2775947,nssv2768606,nssv2769558,nssv2776959,nssv2770650,nssv2777263,nssv2776173,nssv2770931,nssv2777274,nssv2777039,nssv2774194,nssv2774177,nssv2773653,nssv2770515,nssv2769880,nssv2777481,nssv2769684,nssv2771968,nssv2777774,nssv2769328,nssv2769625,nssv2774578,nssv2775047,nssv2775942,nssv2777721,nssv2776477,nssv2769006,nssv2770075,nssv2770127,nssv2777170,nssv2768825,nssv2776915,nssv2772838,nssv2772328,nssv2773588,nssv2776937,nssv2769978,nssv2775597,nssv2776661,nssv2777874,nssv2769204,nssv2770521,nssv2778430,nssv2771498,nssv2772615,nssv2777574,nssv2776352,nssv2778148,nssv2769818,nssv2768836,nssv2771100,nssv2777212,nssv2773285,nssv2774973,nssv2777578,nssv2778111,nssv2770939,nssv2774767,nssv2775789,nssv2772119,nssv2774658,nssv2778437,nssv2770796,nssv2773725,nssv2769247,nssv2772681,nssv2771075,nssv2772367,nssv2775240,nssv2770599,nssv2770069,nssv2770753,nssv2773570,nssv2771581,nssv2773519,nssv2768536,nssv2772815,nssv2778268,nssv2774419,nssv2769009,nssv2774652,nssv2773271,nssv2776766,nssv2771308,nssv2770456,nssv2772147,nssv2770389,nssv2778473,nssv2768582,nssv2775432,nssv2776215,nssv2776036,nssv2777167,nssv2774317,nssv2774197,nssv2772876,nssv2771085,nssv2770412,nssv2768560,nssv2771173,nssv2778064,nssv2770221,nssv2773353,nssv2773726,nssv2768786,nssv2771834,nssv2772392,nssv2771057,nssv2773163,nssv2769074,nssv2777861,nssv2777102,nssv2771235,nssv2770104,nssv2776787,nssv2777545,nssv2777270,nssv2772560,nssv2777431,nssv2775353,nssv2776741,nssv2771353,nssv2772944,nssv2776933 M 2366 487 1 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv1050694 10 4280802 4296798 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3489128,nssv3501876 M 29084 2 0 "" nsv1037897 10 4284071 4301585 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707668 M 29084 0 1 "" esv33732 10 4292983 4308917 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv100656 M 51 1 0 "" 21656 nsv437653 10 4294810 4304845 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467534 M 60 0 1 "" NA18500 nsv507532 10 4313728 4319728 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619141,nssv623101,nssv620648 M 4 0 0 "" NA10860,NA15510,NA18994 nsv518582 10 4318928 4326606 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696027 M 2026 0 1 "" nsv522540 10 4333047 4338396 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705919 M 2026 1 0 "" nsv437654 10 4418563 4449527 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467535 M 60 0 1 LINC00703 NA18863 nsv436120 10 4426698 4433541 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466559 M 2 0 1 LINC00703 NA18505 nsv8598 10 4427110 4432204 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv19019 M 31 0 1 LINC00703 NA19173 esv21787 10 4427636 4431411 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20062 M 40 0 5 LINC00703 NA18505,NA18523,NA18909,NA19129,NA19225 nsv516066 10 4427657 4437552 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv690787,nssv681113,nssv666939,nssv661487,nssv665965,nssv658317,nssv667116,nssv686595,nssv679186,nssv690149,nssv686631,nssv661737,nssv677354,nssv689030,nssv667242,nssv687438,nssv691010,nssv663462,nssv677666,nssv669369,nssv675156,nssv665985,nssv680462,nssv689658,nssv659465,nssv675922,nssv686698,nssv666430,nssv690064,nssv666545,nssv662309,nssv692701,nssv658634 M 2026 0 33 LINC00703 esv2421620 10 4427754 4429686 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5060662,essv5111417,essv5095097,essv5144096,essv5112199,essv5154349,essv5155857,essv5008631,essv5075646,essv5107386,essv5119435,essv5049546,essv5060852,essv5014559,essv5008455,essv5147200,essv5088316,essv5091550,essv5091897,essv5036593,essv5020759,essv5056329,essv5142336,essv5132686,essv5077296,essv5124201,essv5126103,essv5066672,essv5092204,essv5155554,essv5007816,essv5050265,essv5045599,essv5078569,essv5093699,essv5136246,essv5096743,essv5053732,essv5106685,essv5023083,essv5083134,essv5115406,essv5137182,essv5034128,essv5046288,essv5054772,essv5013031,essv5110966,essv5091166,essv5127013,essv5119212,essv5156271,essv5004173,essv5116979,essv5069785,essv5027485,essv5100644,essv5016353,essv5085551,essv5119867,essv5106544,essv5155700,essv5136717,essv5136169,essv5069206,essv5158352,essv5017066,essv5104642,essv5160736,essv5079210,essv5029725,essv5054156,essv5135448,essv5122418,essv5093426,essv5141333,essv5125667,essv5032990,essv5094678,essv5099977,essv5121387,essv5046975,essv5150277,essv5149047,essv5145247,essv5016396,essv5105117,essv5020440,essv5113471 M 1184 0 89 LINC00703 NA18485,NA18487,NA18488,NA18503,NA18505,NA18509,NA18518,NA18520,NA18852,NA18854,NA18862,NA18863,NA18909,NA18910,NA18934,NA18935,NA19041,NA19044,NA19094,NA19102,NA19107,NA19109,NA19117,NA19118,NA19127,NA19129,NA19150,NA19151,NA19171,NA19173,NA19176,NA19179,NA19182,NA19183,NA19184,NA19189,NA19198,NA19199,NA19203,NA19225,NA19235,NA19248,NA19249,NA19307,NA19309,NA19313,NA19316,NA19347,NA19350,NA19359,NA19371,NA19377,NA19385,NA19390,NA19399,NA19404,NA19431,NA19435,NA19437,NA19440,NA19472,NA19700,NA19702,NA19711,NA19714,NA19819,NA19828,NA19900,NA19901,NA19902,NA19904,NA19908,NA19917,NA19918,NA20126,NA20128,NA20317,NA20335,NA20348,NA21295,NA21333,NA21364,NA21479,NA21578,NA21580,NA21632,NA21634,NA21636,NA21826 nsv510210 10 4442301 4448301 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621488 M 4 0 0 LINC00703 NA15510 esv2196877 10 4473754 4474214 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4798410 M 1 0 1 "" NA18507 nsv1041785 10 4497158 4554194 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492935,nssv3490317 M 29084 2 0 "" nsv525911 10 4512299 4516111 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702115 M 2026 0 1 "" esv1182790 10 4528112 4528112 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3968962 M 2 1 0 "" HuRef nsv522046 10 4528492 4560425 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv694816 M 2026 1 0 "" nsv549862 10 4544018 4583307 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv742172 M 17421 0 1 "" nsv1040910 10 4544674 4596939 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707669 M 29084 0 1 "" nsv1039505 10 4568211 4602249 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486356 M 29084 1 0 "" nsv527315 10 4617405 4626054 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703740 M 2026 0 1 "" esv999409 10 4624287 4625241 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565175 M 3 0 1 "" HuRef esv6091 10 4624530 4625318 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28532 M 1 0 0 "" esv2305302 10 4624608 4625310 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4962354 M 1 0 1 "" NA18507 esv1005287 10 4624803 4625121 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583823 M 3 0 1 "" HuRef esv1438751 10 4624811 4625130 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3795679 M 2 0 1 "" HuRef esv2761568 10 4625908 4664999 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994395 M 1109 0 1 "" SW_1004 esv2355818 10 4626680 4627096 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4553679 M 1 0 1 "" NA18507 esv1003073 10 4639567 4639616 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566925 M 3 0 1 "" HuRef esv1228362 10 4639580 4639630 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3706280 M 2 0 1 "" HuRef esv3389637 10 4670805 4670825 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946697,essv8946690,essv8946695,essv8946694,essv8946696,essv8946693,essv8946691 M 185 7 0 "" NA18499,NA18510,NA18907,NA19099,NA19138,NA19147,NA19210 esv3307771 10 4670811 4670812 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7744041,essv7763006,essv7761417,essv7745420,essv7746630,essv7741274,essv7753510 M 185 7 0 "" NA18499,NA18510,NA18907,NA19099,NA19138,NA19147,NA19210 esv2563012 10 4676396 4678007 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5218777 M 1 0 1 "" NA18507 esv2384891 10 4676882 4677831 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4632927 M 1 0 1 "" NA18507 nsv511436 10 4690968 4701764 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626048 M 1 0 1 LINC00704,LINC00705 1 nsv549863 10 4694709 4700241 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv742173 M 17421 1 0 LINC00704 nsv549864 10 4694709 4700298 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv742176,nssv742177,nssv742175,nssv742174,nssv742179,nssv742186,nssv742185,nssv742178,nssv742182,nssv742181,nssv742184,nssv742180,nssv742183,nssv742187,nssv742190,nssv742189,nssv742188,nssv742192,nssv742191,nssv742193 M 17421 13 7 LINC00704 nsv549865 10 4694709 4705476 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv742194 M 17421 1 0 LINC00704 esv9415 10 4698261 4700786 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31856 M 1 0 0 LINC00704 esv2306271 10 4698321 4700704 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4705987 M 1 0 1 LINC00704 NA18507 nsv512140 10 4698452 4700526 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624701 M 1 0 1 LINC00704 1 esv2527644 10 4698472 4701933 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282296 M 1 0 1 LINC00704 NA18507 esv3781 10 4698489 4700592 CNV loss Wang_et_al_2008 18987735 Sequencing essv26222 M 1 0 1 LINC00704 YH esv991699 10 4698495 4702103 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564984 M 3 0 1 LINC00704 HuRef esv22743 10 4698559 4700493 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19494 M 40 27 0 LINC00704 NA06985,NA07037,NA07045,NA11894,NA12414,NA12489,NA12828,NA12878,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19147,NA19190,NA19225,NA19240,NA19257 nsv820963 10 4698559 4700493 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420848 M 1 0 1 LINC00704 NA10851 dgv945n54 10 4698627 4700241 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549866,nsv549867,nsv549868 M 17421 5 0 LINC00704 dgv946n54 10 4698627 4700298 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549871,nsv549869 M 17421 77 1053 LINC00704 nsv549870 10 4698627 4705476 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743328,nssv743327,nssv743330,nssv743329,nssv743332,nssv743331 M 17421 4 2 LINC00704 dgv947n54 10 4699065 4700298 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549873,nsv549872,nsv549875,nsv549874,nsv549876 M 17421 10 0 LINC00704 nsv549877 10 4699167 4700298 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743450,nssv743449,nssv743366,nssv743448,nssv743365,nssv743351,nssv743347,nssv743346,nssv743348,nssv743364,nssv743350,nssv743349,nssv743363,nssv743356,nssv743352,nssv743353,nssv743355,nssv743354,nssv743362,nssv743361,nssv743360,nssv743357,nssv743359,nssv743358,nssv743368,nssv743367,nssv743371,nssv743370,nssv743369,nssv743405,nssv743382,nssv743381,nssv743372,nssv743373,nssv743374,nssv743380,nssv743379,nssv743375,nssv743378,nssv743376,nssv743377,nssv743383,nssv743391,nssv743384,nssv743387,nssv743386,nssv743385,nssv743390,nssv743388,nssv743389,nssv743404,nssv743447,nssv743396,nssv743394,nssv743392,nssv743393,nssv743395,nssv743399,nssv743398,nssv743397,nssv743403,nssv743402,nssv743401,nssv743400,nssv743413,nssv743409,nssv743408,nssv743406,nssv743407,nssv743426,nssv743412,nssv743411,nssv743410,nssv743418,nssv743414,nssv743425,nssv743416,nssv743417,nssv743415,nssv743419,nssv743422,nssv743421,nssv743420,nssv743446,nssv743423,nssv743424,nssv743432,nssv743427,nssv743428,nssv743430,nssv743431,nssv743429,nssv743434,nssv743433,nssv743435,nssv743444,nssv743436,nssv743443,nssv743437,nssv743438,nssv743442,nssv743441,nssv743440,nssv743445,nssv743439,nssv743457,nssv743456,nssv743452,nssv743451,nssv743453,nssv743454,nssv743455,nssv743462,nssv743461,nssv743460,nssv743458,nssv743459,nssv743463,nssv743464,nssv743466,nssv743465 M 17421 0 121 LINC00704 dgv948n54 10 4699580 4700298 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549879,nsv549878 M 17421 0 2 LINC00704 nsv1040924 10 4724176 4755606 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707670 M 29084 0 1 "" nsv525960 10 4747822 4748118 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv702171 M 2026 1 0 "" nsv549880 10 4771029 4800561 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743469 M 17421 1 0 "" nsv5620 10 4777958 4804661 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8383 M 9 0 1 "" NA12156 esv27758 10 4847721 4848391 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12530 M 40 4 1 "" NA18523,NA19108,NA19129,NA19147,NA19225 nsv821103 10 4847721 4848391 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420849 M 1 0 1 "" NA10851 esv1373319 10 4847883 4848103 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3738711 M 2 0 1 "" HuRef esv4850 10 4859465 4859759 CNV loss Wang_et_al_2008 18987735 Sequencing essv27291 M 1 0 1 AKR1E2 YH nsv1045155 10 4862239 5201318 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707671,nssv3494130 M 29084 0 2 AKR1C1,AKR1C2,AKR1C3,AKR1C6P,AKR1CL1,AKR1E2 nsv549881 10 4891798 5309679 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743470 M 17421 0 1 AKR1C1,AKR1C2,AKR1C3,AKR1C4,AKR1C6P,AKR1CL1 esv23252 10 4900041 4900707 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17803 M 40 0 1 "" NA19114 esv2762839 10 4906614 4918890 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7018137 M 1109 0 1 AKR1C6P RW_0249 nsv1042940 10 4906614 4964581 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707672 M 29084 0 1 AKR1C6P nsv1050246 10 4917428 5201318 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502300,nssv3487699 M 29084 2 0 AKR1C1,AKR1C2,AKR1C3,AKR1C6P,AKR1CL1 nsv519977 10 4924211 4938921 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697159 M 2026 1 0 AKR1C6P nsv549882 10 4933518 5193864 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743471 M 17421 0 1 AKR1C1,AKR1C2,AKR1C3,AKR1C6P,AKR1CL1 esv2763913 10 4951021 5311407 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994398,essv6994397,essv6994396 M 1109 2 1 AKR1C1,AKR1C2,AKR1C3,AKR1C4,AKR1CL1 SW_0790,SW_1063,SW_1367 dgv2e19 10 4962558 5059255 OTHER inversion Ahn_et_al_2009 19470904 Sequencing esv7467,esv5455 M 1 0 0 AKR1C1,AKR1C2 nsv7197 10 4974326 5019031 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3858 M 9 0 0 AKR1C1 NA12878 nsv5632 10 4984309 4987561 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv715 M 9 1 0 "" NA19240 esv1213194 10 4986863 4986912 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3848955 M 2 0 1 "" HuRef nsv825221 10 4989349 5036239 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1435265 M 31 0 1 AKR1C1,AKR1C2 NA18942 esv1580698 10 4994874 5036786 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4106075 M 2 0 0 AKR1C1,AKR1C2 HuRef nsv947726 10 4998069 5002084 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831663,nssv1830705,nssv1831659,nssv1830714,nssv1830654,nssv1830712,nssv1830667,nssv1830713,nssv1830665,nssv1830707,nssv1830664,nssv1830679,nssv1830674,nssv1830719,nssv1830670,nssv1831665,nssv1830662,nssv1830701,nssv1831661,nssv1830689,nssv1830673,nssv1830653,nssv1830657,nssv1831672,nssv1830668,nssv1830690,nssv1830682,nssv1830695,nssv1830675,nssv1830693,nssv1830671,nssv1830697,nssv1831655,nssv1830694,nssv1831662,nssv1830703,nssv1830663,nssv1831651,nssv1831657,nssv1830700,nssv1830666,nssv1831653,nssv1830656,nssv1830706,nssv1830672,nssv1830683,nssv1830684,nssv1831644,nssv1831654,nssv1831673,nssv1830655,nssv1831666,nssv1831656,nssv1831667,nssv1830660,nssv1831650,nssv1830659,nssv1830718,nssv1831660,nssv1830710,nssv1830678,nssv1830708,nssv1830658,nssv1831664,nssv1831658,nssv1830715,nssv1830681,nssv1830687,nssv1830685,nssv1831671,nssv1830669,nssv1830676,nssv1830677,nssv1831649,nssv1830661,nssv1830704,nssv1830711,nssv1831652,nssv1830692,nssv1830696,nssv1830691,nssv1831669,nssv1831668,nssv1831646,nssv1830709,nssv1830702,nssv1830688,nssv1831670,nssv1831647,nssv1830698,nssv1830716,nssv1831645,nssv1830717,nssv1830686,nssv1831648,nssv1830699,nssv1830680 M 97 10 0 AKR1C1 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1039386 10 4998383 5376845 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486246 M 29084 1 0 AKR1C1,AKR1C2,AKR1C3,AKR1C4,AKR1CL1 esv9055 10 5001568 5030592 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv31496 M 1 0 0 AKR1C1,AKR1C2 nsv1036566 10 5003504 5251426 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707673 M 29084 0 1 AKR1C1,AKR1C2,AKR1C3,AKR1C4,AKR1CL1 nsv947727 10 5003793 5043848 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831694,nssv1831745,nssv1831756,nssv1831762,nssv1831696,nssv1831761,nssv1831760,nssv1831738,nssv1831753,nssv1831714,nssv1831706,nssv1831719,nssv1831675,nssv1831674,nssv1831695,nssv1831700,nssv1831702,nssv1831709,nssv1831690,nssv1831704,nssv1831676,nssv1831769,nssv1831758,nssv1831725,nssv1831678,nssv1831723,nssv1831691,nssv1831720,nssv1831681,nssv1831717,nssv1831703,nssv1831763,nssv1831686,nssv1831732,nssv1831759,nssv1831741,nssv1831688,nssv1831748,nssv1831685,nssv1831736,nssv1831693,nssv1831770,nssv1831680,nssv1831701,nssv1831679,nssv1831739,nssv1831754,nssv1831734,nssv1831684,nssv1831728,nssv1831683,nssv1831750,nssv1831692,nssv1831712,nssv1831698,nssv1831711,nssv1831751,nssv1831730,nssv1831752,nssv1831697,nssv1831699,nssv1831722,nssv1831682,nssv1831749,nssv1831687,nssv1831764,nssv1831677,nssv1831710,nssv1831689,nssv1831726,nssv1831705,nssv1831747,nssv1831755,nssv1831740,nssv1831757,nssv1831746,nssv1831733,nssv1831727,nssv1831729,nssv1831735,nssv1831713,nssv1831718,nssv1831724,nssv1831715,nssv1831708,nssv1831766,nssv1831765,nssv1831744,nssv1831768,nssv1831767,nssv1831731,nssv1831743,nssv1831737,nssv1831721,nssv1831716,nssv1831742,nssv1831707 M 97 10 0 AKR1C1,AKR1C2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv122n67 10 5004500 5012098 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825222,nsv825226 M 31 2 0 AKR1C1 NA18949,NA18997 dgv123n67 10 5005738 5030927 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825223,nsv825224,nsv825225 M 31 0 3 AKR1C1,AKR1C2 NA18547,NA18592,NA18947 esv3891742 10 5006797 5134037 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25782995 M 3017 0 1 AKR1C1,AKR1C2,AKR1C3 esv3451281 10 5012973 5017553 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808524 M 185 0 0 "" NA12878 nsv549883 10 5016096 5265762 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743472 M 17421 0 1 AKR1C2,AKR1C3,AKR1C4,AKR1CL1 nsv825227 10 5019975 5026187 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437613 M 31 1 0 AKR1C2 NA18949 nsv825228 10 5019975 5029589 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1421906 M 31 1 0 AKR1C2 NA18997 nsv549884 10 5021360 5055248 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743473 M 17421 1 0 AKR1C2 esv3891743 10 5041532 5073884 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25796174 M 3017 0 1 AKR1C2 nsv831773 10 5059805 5099716 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448179,nssv1448178 M 95 0 2 AKR1C3 esv1658744 10 5064626 5064626 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4272236 M 2 1 0 "" HuRef nsv947728 10 5128057 5128813 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831857,nssv1831798,nssv1831791,nssv1831839,nssv1831853,nssv1831771,nssv1831850,nssv1831840,nssv1831772,nssv1831804,nssv1831799,nssv1831858,nssv1831803,nssv1831841,nssv1831855,nssv1831813,nssv1831792,nssv1831859,nssv1831793,nssv1831794,nssv1831788,nssv1831864,nssv1831800,nssv1831810,nssv1831774,nssv1831817,nssv1831778,nssv1831831,nssv1831777,nssv1831866,nssv1831795,nssv1831842,nssv1831776,nssv1831820,nssv1831783,nssv1831808,nssv1831849,nssv1831822,nssv1831789,nssv1831797,nssv1831773,nssv1831838,nssv1831785,nssv1831835,nssv1831782,nssv1831829,nssv1831851,nssv1831816,nssv1831790,nssv1831801,nssv1831787,nssv1831860,nssv1831775,nssv1831867,nssv1831781,nssv1831806,nssv1831854,nssv1831833,nssv1831848,nssv1831845,nssv1831856,nssv1831807,nssv1831784,nssv1831825,nssv1831802,nssv1831847,nssv1831796,nssv1831836,nssv1831780,nssv1831844,nssv1831852,nssv1831837,nssv1831779,nssv1831830,nssv1831786,nssv1831814,nssv1831823,nssv1831832,nssv1831819,nssv1831812,nssv1831826,nssv1831843,nssv1831811,nssv1831865,nssv1831821,nssv1831824,nssv1831827,nssv1831828,nssv1831834,nssv1831846,nssv1831809,nssv1831805,nssv1831862,nssv1831815,nssv1831863,nssv1831861,nssv1831818 M 97 10 0 AKR1C3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv466714 10 5132855 5165450 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542190 M 1557 0 1 AKR1C3 NINDS_235 nsv549885 10 5132855 5165450 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174109 M 17421 0 1 AKR1C3 NINDS_235 nsv1047686 10 5138453 5175582 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707674 M 29084 0 1 AKR1C3 nsv1048081 10 5139144 5311395 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3490487 M 29084 0 1 AKR1C3,AKR1C4,AKR1CL1 esv2014971 10 5150336 5150762 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4786186 M 1 0 1 "" NA18507 esv24724 10 5153668 5154362 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9874 M 40 0 1 "" NA19257 nsv523631 10 5154836 5160495 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699431 M 2026 0 1 "" esv2484274 10 5191523 5192599 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5234210 M 1 1 0 AKR1CL1 NA18507 esv4943 10 5192052 5314829 CNV loss Wang_et_al_2008 18987735 Sequencing essv27384 M 1 0 1 AKR1C4,AKR1CL1 YH esv988429 10 5192143 5192143 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566172 M 3 1 0 AKR1CL1 HuRef esv1074345 10 5192144 5192144 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4297345 M 2 1 0 AKR1CL1 HuRef nsv549886 10 5195437 5622060 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743474 M 17421 0 1 AKR1C4,AKR1CL1,CALML3,CALML5,NET1,TUBAL3,UCN3 esv1314667 10 5201310 5201310 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4337020 M 2 1 0 AKR1CL1 HuRef esv3351321 10 5201326 5201408 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808526 M 185 1 0 AKR1CL1 NA12878 esv1007439 10 5206971 5216919 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565071 M 3 0 1 AKR1CL1 HuRef nsv5643 10 5219780 5292665 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5156,nssv8387,nssv3859 M 9 0 3 AKR1C4 NA12156,NA12878,NA19129 esv23753 10 5239890 5240922 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15040 M 40 0 3 AKR1C4 NA19147,NA19190,NA19225 nsv508566 10 5246836 5311354 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618939,nssv617375,nssv620172 M 4 0 3 AKR1C4 CHM,NA10860,NA15510 nsv549887 10 5253628 5293742 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743475 M 17421 0 1 "" esv3891744 10 5262778 5398461 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788210,essv25788153,essv25792966,essv25788145 M 3017 4 0 UCN3 nsv435908 10 5275140 5283646 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466560 M 2 0 1 "" NA15510 dgv65n27 10 5275597 5387191 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466717,nsv466715 M 1557 0 2 "" HGDP00671,HGDP00672 nsv549888 10 5275597 5387191 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174110,nssv1174111 M 17421 0 2 "" HGDP00671,HGDP00672 esv2458647 10 5276350 5283732 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5315602 M 1 0 1 "" NA18507 esv1926859 10 5277108 5283536 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4893664 M 1 0 1 "" NA18507 esv1004363 10 5277188 5283869 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564746 M 3 0 1 "" HuRef nsv498717 10 5277299 5283364 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585433 M 9 0 1 "" nsv947729 10 5335490 5337794 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831899,nssv1831931,nssv1831950,nssv1831909,nssv1831888,nssv1833188,nssv1831880,nssv1831914,nssv1831893,nssv1831937,nssv1831874,nssv1831936,nssv1831869,nssv1831924,nssv1831884,nssv1831894,nssv1831896,nssv1831938,nssv1831947,nssv1831448,nssv1833184,nssv1831912,nssv1831889,nssv1831915,nssv1831945,nssv1831910,nssv1831892,nssv1833194,nssv1831875,nssv1831939,nssv1831885,nssv1831907,nssv1831900,nssv1831919,nssv1833186,nssv1831868,nssv1831882,nssv1831898,nssv1831873,nssv1831932,nssv1831946,nssv1831917,nssv1831871,nssv1831891,nssv1831878,nssv1831935,nssv1831948,nssv1831905,nssv1831887,nssv1833191,nssv1833185,nssv1831901,nssv1831886,nssv1831926,nssv1831879,nssv1831903,nssv1831877,nssv1833189,nssv1831897,nssv1831895,nssv1831870,nssv1833193,nssv1831951,nssv1833192,nssv1831883,nssv1831930,nssv1831881,nssv1831942,nssv1831949,nssv1831928,nssv1831876,nssv1831913,nssv1831872,nssv1831925,nssv1831890,nssv1831933,nssv1831944,nssv1831922,nssv1831943,nssv1831941,nssv1833187,nssv1831927,nssv1831929,nssv1831904,nssv1831911,nssv1831934,nssv1831447,nssv1831940,nssv1831908,nssv1831916,nssv1831923,nssv1831918,nssv1831902,nssv1831920,nssv1833190,nssv1831921,nssv1831906 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv27132 10 5366187 5368525 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11627 M 40 0 1 "" NA19147 esv2436381 10 5368587 5368793 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5232015 M 1 0 1 "" NA18507 esv22286 10 5386324 5387499 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20978 M 40 0 2 "" NA11894,NA11995 dgv356e59 10 5400952 5403450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3387601,esv3362564 M 185 2 0 UCN3 NA19239,NA19240 esv3398406 10 5413446 5413485 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740683 M 185 1 0 "" NA12878 nsv525615 10 5414465 5415422 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701760 M 2026 0 1 "" nsv1045141 10 5416140 5481959 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487540 M 29084 1 0 NET1,TUBAL3 nsv831774 10 5453556 5697427 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1448180 M 95 1 0 CALML3,CALML5,NET1 nsv1051283 10 5495474 5609941 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3492958 M 29084 1 0 CALML3,CALML5 esv995574 10 5512926 5513011 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577977 M 3 0 1 "" HuRef esv1489809 10 5513003 5513089 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4306772 M 2 0 1 "" HuRef nsv24420 10 5513004 5513089 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv42998 M 24 "" dgv357e59 10 5529052 5530450 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3336078,esv3363753 M 185 2 0 "" NA19239,NA19240 dgv664n100 10 5532109 5609941 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1049523,nsv1052002,nsv1038479 M 29084 7 0 CALML3 nsv523491 10 5532109 5760073 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699258 M 2026 1 0 ASB13,CALML3 esv33743 10 5537117 5542397 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93701 M 51 0 1 "" 21972 esv2759729 10 5547024 5844786 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2758209,esv2757364 M 270 5 0 ASB13,CALML3,FAM208B NA19131,NA19132,NA19143,NA19200,NA19202 esv1329930 10 5553209 5553209 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3855801 M 2 1 0 "" HuRef dgv358e59 10 5567452 5567750 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3352795,esv3334576 M 185 2 0 "" NA12878,NA12891 nsv470915 10 5581025 5592880 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv544816 M 443 0 1 "" HGDP01412 nsv1044746 10 5585343 5609941 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3493377 M 29084 1 0 "" esv24679 10 5592128 5594507 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17167 M 40 0 3 "" NA12489,NA18505,NA18511 esv992931 10 5595295 5595295 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579272 M 3 1 0 "" HuRef nsv549889 10 5600349 5620131 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743476 M 17421 0 1 "" esv1295231 10 5609533 5609678 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3739657 M 2 0 1 "" HuRef nsv1036798 10 5677876 5692760 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3485490 M 29084 1 0 "" nsv1040932 10 5677876 5705780 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3486649 M 29084 1 0 "" nsv466718 10 5679913 5697533 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542194 M 1557 1 0 "" HGDP00893 nsv549890 10 5679913 5697533 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174112 M 17421 1 0 "" HGDP00893 esv1096988 10 5684125 5684213 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4058092 M 2 0 1 "" HuRef nsv1054888 10 5685039 5734618 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3496055 M 29084 1 0 ASB13 nsv466719 10 5685901 5702921 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542195 M 1557 0 1 "" HGDP00912 nsv549891 10 5685901 5702921 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174113 M 17421 0 1 "" HGDP00912 nsv519582 10 5686109 5760073 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv690930,nssv676923,nssv663512,nssv656962,nssv672886 M 2026 5 0 ASB13 nsv8599 10 5689135 5759934 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21567 M 31 1 0 ASB13 NA19132 dgv665n100 10 5689766 5765214 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1050965,nsv1040422,nsv1041684,nsv1049620,nsv1052519,nsv1039650,nsv1044330,nsv1054909,nsv1038690,nsv1043251,nsv1037709 M 29084 39 0 ASB13 nsv975791 10 5692231 5751083 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2760087 M 97 1 0 ASB13 HGDP00927 nsv466720 10 5692283 5755407 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv542196 M 1557 1 0 ASB13 HGDP00927 nsv549892 10 5692283 5755407 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1174114 M 17421 1 0 ASB13 HGDP00927 nsv470917 10 5694173 5755407 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv544817 M 443 1 0 ASB13 HGDP00927 nsv818742 10 5694173 5755407 CNV gain Wang_et_al_2007 17921354 SNP array nssv1418173 M 112 1 0 ASB13 NA19143 esv1004405 10 5698374 5698428 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569440 M 3 0 1 "" HuRef esv1003480 10 5698392 5698465 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579958 M 3 0 1 "" HuRef esv1717688 10 5698416 5698471 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3718249 M 2 0 1 "" HuRef esv2760149 10 5705464 5764388 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7018147,essv7018143,essv7018139,essv7018141,essv7018138,essv7018146,essv7018140,essv7018145,essv7018142 M 1109 9 0 ASB13 RW_0036,RW_0183,RW_0200,RW_0207,RW_0212,RW_0502,RW_0605,RW_0615,RW_0663 nsv442170 10 5705468 5757133 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1658964,nssv1658962,nssv1658965,nssv1658963,nssv1658961 M 270 5 0 ASB13 NA19131,NA19132,NA19143,NA19200,NA19202 dgv19e55 10 5705780 5756864 CNV gain Pinto_et_al_2007 17911159 SNP array esv35082,esv34623 M 771 4 0 ASB13 NA19131,NA19143 esv998388 10 5721694 5721694 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584068 M 3 1 0 ASB13 HuRef esv1243199 10 5721695 5721695 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4206037 M 2 1 0 ASB13 HuRef esv3310522 10 5721696 5721696 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843425 M 185 1 0 ASB13 NA12878 esv3390720 10 5721697 5721697 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701261 M 185 1 0 ASB13 NA12878 nsv549893 10 5741767 5761659 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743477 M 17421 0 1 ASB13 nsv549894 10 5748807 5761659 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743478 M 17421 0 1 "" nsv549895 10 5752316 5775654 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743479 M 17421 0 1 FAM208B nsv522415 10 5761659 5808499 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695198 M 2026 1 0 FAM208B dgv1e49 10 5766827 6265193 CNV loss Gusev_et_al_2009 18971310 SNP array esv34061,esv34147 M 270 0 0 ANKRD16,FAM208B,FBXO18,GDI2,IL15RA,IL2RA,MIR3155A,MIR3155B,PFKFB3,RBM17 esv1004136 10 5769157 5771569 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563777 M 3 1 0 FAM208B HuRef nsv8600 10 5773697 5776733 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv18615 M 31 1 0 FAM208B NA18537 nsv1050663 10 5777985 5825924 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3497201 M 29084 0 1 FAM208B nsv528504 10 5779060 5794617 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705111 M 2026 1 0 FAM208B dgv36n21 10 5793743 5808499 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv525080,nsv519891 M 2026 0 2 FAM208B nsv831775 10 5844341 6040855 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448181 M 95 0 1 ANKRD16,FAM208B,FBXO18,GDI2,IL15RA nsv947730 10 5857694 5867244 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831458,nssv1831490,nssv1831531,nssv1831508,nssv1831464,nssv1831475,nssv1831535,nssv1831539,nssv1831528,nssv1831503,nssv1831462,nssv1831514,nssv1831450,nssv1831485,nssv1831526,nssv1831507,nssv1831470,nssv1831494,nssv1831466,nssv1831509,nssv1831454,nssv1831525,nssv1831533,nssv1831523,nssv1831480,nssv1831538,nssv1831461,nssv1831545,nssv1831453,nssv1831492,nssv1831463,nssv1831516,nssv1831459,nssv1831497,nssv1831474,nssv1831499,nssv1831527,nssv1831449,nssv1831468,nssv1831489,nssv1831467,nssv1831522,nssv1831471,nssv1831510,nssv1831457,nssv1831483,nssv1831529,nssv1831504,nssv1831478,nssv1831488,nssv1831532,nssv1831487,nssv1831481,nssv1831515,nssv1831455,nssv1831501,nssv1831530,nssv1831521,nssv1831460,nssv1831496,nssv1831534,nssv1831502,nssv1831452,nssv1831493,nssv1831451,nssv1831524,nssv1831477,nssv1831495,nssv1831465,nssv1831505,nssv1831473,nssv1831482,nssv1831469,nssv1831518,nssv1831456,nssv1831543,nssv1831517,nssv1831506,nssv1831541,nssv1831512,nssv1831519,nssv1831540,nssv1831542,nssv1831491,nssv1831498,nssv1831500,nssv1831520,nssv1831479,nssv1831486,nssv1831472,nssv1831536,nssv1831511,nssv1831544,nssv1831484,nssv1831476,nssv1831513,nssv1831537 M 97 10 0 GDI2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv515935 10 5860400 5909845 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv665378,nssv661133,nssv668657 M 2026 3 0 GDI2 nsv549896 10 5860400 5920072 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743480 M 17421 0 1 GDI2 nsv5654 10 5908371 5970640 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6272,nssv3860 M 9 0 2 ANKRD16 NA12156,NA12878 nsv825229 10 5926911 6007703 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1439036 M 31 1 0 ANKRD16,FBXO18 NA18973 nsv436115 10 5928589 5933306 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466564 M 2 0 1 "" NA18505 nsv820964 10 5929120 5932698 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420850 M 1 0 1 "" NA10851 nsv825230 10 5929120 5932698 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1421907,nssv1425959,nssv1430749,nssv1424296,nssv1437614,nssv1439835,nssv1428409 M 31 0 7 "" AK16,AK4,NA18537,NA18547,NA18947,NA18949,NA18997 esv1005627 10 5929488 5933390 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563583 M 3 0 1 "" HuRef nsv498718 10 5929565 5932851 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585434 M 9 0 1 "" esv1508321 10 5929592 5932850 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3659479 M 2 0 1 "" HuRef nsv24093 10 5929629 5932883 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv42671 M 24 "" nsv825232 10 5929736 5932555 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436018,nssv1436841 M 31 2 0 "" NA18542,NA18566 esv28680 10 5929946 5932698 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12611 M 40 5 13 "" NA07045,NA11894,NA11931,NA12006,NA12239,NA12776,NA15510,NA18502,NA18517,NA18861,NA18907,NA18909,NA18916,NA19099,NA19129,NA19147,NA19190,NA19225 nsv549897 10 5930694 5931507 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743482,nssv743481,nssv743483,nssv743484 M 17421 0 4 "" nsv549898 10 5930694 5932371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743489,nssv743488,nssv743487,nssv743486,nssv743485,nssv743490,nssv743491,nssv743494,nssv743492,nssv743493,nssv743495,nssv743497,nssv743496 M 17421 0 13 "" nsv549899 10 5931132 5931507 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743498 M 17421 0 1 "" nsv549900 10 5931350 5931507 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743500,nssv743499 M 17421 0 2 "" nsv549901 10 5931350 5932371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743505,nssv743501,nssv743504,nssv743506,nssv743502,nssv743503,nssv743508,nssv743509,nssv743507,nssv743510,nssv743513,nssv743512,nssv743511,nssv743517,nssv743514,nssv743516,nssv743515 M 17421 0 17 "" nsv514565 10 5931469 5932380 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2770479,nssv2773687,nssv2772142,nssv2772573,nssv2777928,nssv2773059,nssv2775428,nssv2778178,nssv2775913,nssv2770491,nssv2773286,nssv2771782,nssv2775006,nssv2769357,nssv2772148,nssv2769696,nssv2769952,nssv2774139,nssv2775823,nssv2772101,nssv2770361,nssv2772763,nssv2769421,nssv2777655,nssv2773527,nssv2771361,nssv2776101,nssv2773906,nssv2771680,nssv2774417,nssv2776969,nssv2769673,nssv2775716,nssv2768868,nssv2772689,nssv2772862,nssv2775096,nssv2773104,nssv2768517,nssv2775814,nssv2770684,nssv2772868,nssv2771383,nssv2776841,nssv2772870,nssv2778404,nssv2770014,nssv2772033,nssv2776172,nssv2776362,nssv2774841,nssv2772531,nssv2768861,nssv2774025,nssv2768992,nssv2771822,nssv2775384,nssv2769713,nssv2772335,nssv2775065,nssv2772312,nssv2774144,nssv2778372,nssv2774049,nssv2771062,nssv2778003,nssv2773579,nssv2774557,nssv2773829,nssv2777962,nssv2769031,nssv2772660,nssv2776778,nssv2771883,nssv2776164,nssv2778213,nssv2776083,nssv2770648,nssv2770647,nssv2770715,nssv2775150,nssv2772040,nssv2769595,nssv2774820,nssv2776965,nssv2777991,nssv2770657,nssv2776559,nssv2775261,nssv2777925,nssv2771179,nssv2777711,nssv2770273,nssv2771385,nssv2776634,nssv2774685,nssv2777935,nssv2778083,nssv2778282,nssv2774372,nssv2777228,nssv2770779,nssv2771132,nssv2774340,nssv2768865,nssv2769827,nssv2777697,nssv2768683,nssv2772082,nssv2773504,nssv2778261,nssv2768843,nssv2772740,nssv2771907,nssv2774285,nssv2775625,nssv2774462,nssv2776613,nssv2778420,nssv2769496,nssv2774218,nssv2775854,nssv2770642,nssv2778103,nssv2776494,nssv2777221,nssv2778248,nssv2770354,nssv2777610,nssv2778384,nssv2773220,nssv2777483,nssv2769038,nssv2773505,nssv2773477,nssv2769318,nssv2773127,nssv2770139,nssv2776970,nssv2772055,nssv2771628,nssv2768563,nssv2776533,nssv2773602,nssv2770081,nssv2777178,nssv2777405,nssv2773350,nssv2775224,nssv2775595,nssv2771841,nssv2772886,nssv2775649,nssv2769159,nssv2769372,nssv2770379,nssv2777619,nssv2770113,nssv2775055,nssv2778459,nssv2769585,nssv2771589,nssv2774464,nssv2776837,nssv2770414,nssv2775668,nssv2772979,nssv2775444,nssv2770442,nssv2768533,nssv2777390,nssv2769743,nssv2776617,nssv2777281,nssv2773781,nssv2774925,nssv2771650,nssv2773342,nssv2778033,nssv2777802,nssv2769948,nssv2773719,nssv2774854,nssv2772011,nssv2772882,nssv2771362,nssv2776335,nssv2771225,nssv2771808,nssv2772118,nssv2770580,nssv2777548,nssv2778226,nssv2771056,nssv2775327,nssv2770924,nssv2777155,nssv2772214,nssv2776074,nssv2773175,nssv2774292,nssv2776406,nssv2774917,nssv2769404,nssv2769631,nssv2774022,nssv2775819,nssv2778436,nssv2774604,nssv2769993,nssv2777995,nssv2775513,nssv2769513,nssv2778076,nssv2768537,nssv2771211,nssv2777463,nssv2777478,nssv2768523,nssv2776428,nssv2770583,nssv2768608,nssv2774816,nssv2776581,nssv2775060,nssv2773090,nssv2769163,nssv2776065,nssv2772516,nssv2774470,nssv2776084,nssv2776283,nssv2774251,nssv2775922,nssv2773258,nssv2771735,nssv2777410,nssv2772083,nssv2775961,nssv2771275,nssv2773272,nssv2768670,nssv2775115,nssv2776178,nssv2776799,nssv2772417,nssv2777082,nssv2773752,nssv2774073,nssv2770163,nssv2772984,nssv2770716,nssv2772549,nssv2776693,nssv2770008,nssv2769754,nssv2773472,nssv2776407,nssv2768966,nssv2773541,nssv2777456,nssv2768903,nssv2774190,nssv2770771,nssv2774558,nssv2771631,nssv2775851,nssv2776179,nssv2777010,nssv2774312,nssv2776185,nssv2770133,nssv2769539,nssv2775419,nssv2774254,nssv2773542,nssv2771912,nssv2769062,nssv2773626,nssv2775541,nssv2776971,nssv2777668,nssv2777620,nssv2770169,nssv2778065,nssv2770704,nssv2770464,nssv2772602,nssv2777236,nssv2769443,nssv2775601,nssv2775876,nssv2771840,nssv2778197,nssv2773372,nssv2775655,nssv2772305,nssv2774145,nssv2774208,nssv2768902,nssv2775163,nssv2776988,nssv2777691,nssv2776253,nssv2772096,nssv2772786,nssv2777154,nssv2776635,nssv2772861,nssv2775024,nssv2770138,nssv2771903,nssv2772674,nssv2768897,nssv2778198,nssv2775445,nssv2774812,nssv2776114,nssv2777909,nssv2773106,nssv2773213,nssv2778240,nssv2776219,nssv2773990,nssv2777275,nssv2768748,nssv2773503,nssv2775169,nssv2773856,nssv2777854,nssv2770959,nssv2774418,nssv2772088,nssv2769245,nssv2771551,nssv2774999,nssv2771415,nssv2773431,nssv2769213,nssv2771823,nssv2773462,nssv2777257,nssv2777730,nssv2773855,nssv2769624,nssv2771478,nssv2770936,nssv2778070,nssv2777457,nssv2772654,nssv2773275,nssv2773359,nssv2776418,nssv2776936,nssv2773555,nssv2778335,nssv2778479,nssv2778353,nssv2774559,nssv2771602,nssv2776859,nssv2770513,nssv2776944,nssv2770908,nssv2769388,nssv2768669,nssv2777575,nssv2772742,nssv2773880,nssv2773950,nssv2775174,nssv2776237,nssv2775226,nssv2776513,nssv2774842 M 2366 0 375 "" NA06985,NA06989,NA06991,NA06993,NA06994,NA06995,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07348,NA07349,NA07357,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10840,NA10843,NA10845,NA10847,NA10850,NA10851,NA10852,NA10855,NA10857,NA10859,NA10860,NA10863,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12043,NA12044,NA12045,NA12058,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12249,NA12272,NA12273,NA12274,NA12286,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12376,NA12386,NA12399,NA12414,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12813,NA12814,NA12815,NA12817,NA12818,NA12828,NA12829,NA12830,NA12864,NA12872,NA12875,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18537,NA18547,NA18562,NA18563,NA18594,NA18603,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18934,NA18947,NA18949,NA18990,NA18994,NA18997,NA19000,NA19007,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19183,NA19184,NA19185,NA19186,NA19189,NA19191,NA19192,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv549902 10 5931864 5932371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743518 M 17421 0 1 "" nsv549903 10 5932216 5932371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743520,nssv743519,nssv743521 M 17421 0 3 "" nsv549904 10 5933274 5956207 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743522 M 17421 0 1 ANKRD16 nsv437655 10 5940979 5950367 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467536 M 60 0 1 ANKRD16 NA19221 nsv520941 10 5943524 5944924 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697699 M 2026 0 1 ANKRD16 nsv519773 10 5944306 5945237 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv660681,nssv658449,nssv686097,nssv684268,nssv685026 M 2026 0 5 ANKRD16 nsv549905 10 5960842 5970585 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743523 M 17421 0 1 ANKRD16 nsv549906 10 5960842 5978550 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743524 M 17421 0 1 ANKRD16,FBXO18 esv3891745 10 5984421 6001104 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25783737,essv25782499,essv25781698 M 3017 0 3 FBXO18 esv5719 10 5998447 5998756 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28160 M 1 0 0 FBXO18 esv1007377 10 5998523 5998523 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573545 M 3 1 0 FBXO18 HuRef esv5814 10 5998572 5998735 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28255 M 1 0 0 FBXO18 esv1168062 10 5998658 5998658 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3962140 M 2 1 0 FBXO18 HuRef dgv666n100 10 6002641 6092202 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1050983,nsv1041261 M 29084 2 0 FBXO18,IL15RA nsv519436 10 6037826 6048619 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv692418,nssv705266,nssv673982,nssv656196,nssv695508,nssv697046 M 2026 0 6 IL15RA nsv975792 10 6038354 6048511 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2759329 M 97 1 0 IL15RA HGDP00998 nsv549907 10 6040265 6042374 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743525 M 17421 0 1 IL15RA nsv549908 10 6058231 6061553 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743526 M 17421 0 1 IL15RA nsv549909 10 6058254 6060107 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743527 M 17421 0 1 IL15RA nsv525927 10 6099904 6118085 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702131 M 2026 0 1 IL2RA esv3349435 10 6100352 6101950 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8688126 M 185 1 0 IL2RA NA19239 esv5272 10 6104715 6104935 CNV loss Wang_et_al_2008 18987735 Sequencing essv27713 M 1 0 1 IL2RA YH esv1000739 10 6104775 6104847 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584858 M 3 0 1 IL2RA HuRef esv2516054 10 6137027 6138394 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5301439 M 1 0 1 IL2RA NA18507 esv9342 10 6137166 6138143 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31783 M 1 0 0 IL2RA esv2014648 10 6137185 6138077 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4719118 M 1 0 1 IL2RA NA18507 esv4965 10 6137359 6137931 CNV loss Wang_et_al_2008 18987735 Sequencing essv27406 M 1 0 1 IL2RA YH esv1011098 10 6137387 6137884 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573282 M 3 0 1 IL2RA HuRef esv1592945 10 6137392 6137890 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3949144 M 2 0 1 IL2RA HuRef nsv1040397 10 6169765 6198703 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707675 M 29084 0 1 RBM17 nsv5665 10 6195040 6228217 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3862 M 9 1 0 PFKFB3,RBM17 NA12878 nsv819453 10 6198619 6198854 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419403 M 2 0 1 RBM17 AK1 esv2227403 10 6209310 6209796 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4666949 M 1 0 1 "" NA18507 esv4595 10 6209404 6209812 CNV loss Wang_et_al_2008 18987735 Sequencing essv27036 M 1 0 1 "" YH esv999057 10 6209448 6209623 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581503 M 3 0 1 "" HuRef nsv510211 10 6217949 6223949 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622284 M 4 0 0 "" NA10860 nsv437656 10 6223811 6229368 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467537 M 60 0 1 PFKFB3 NA19211 nsv7198 10 6230343 7465172 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11234 M 9 0 0 LINC00706,LINC00707,LOC399715,MIR3155A,MIR3155B,PFKFB3,PRKCQ,PRKCQ-AS1,SFMBT2 NA15510 dgv66n27 10 6253813 6268232 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466725,nsv466726 M 1557 2 0 PFKFB3 HGDP00760,HGDP01212 dgv949n54 10 6253813 6268232 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549911,nsv549910 M 17421 2 0 PFKFB3 HGDP00760,HGDP01212 nsv521145 10 6281809 6286684 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697813 M 2026 0 1 PFKFB3 esv2626974 10 6291200 6293207 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5207976 M 1 0 1 PFKFB3 NA18507 nsv525622 10 6291258 6321221 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701770 M 2026 1 0 PFKFB3 dgv124n67 10 6291269 6292426 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv825233,nsv825234 M 31 0 2 PFKFB3 NA18547,NA18947 esv994076 10 6291648 6293146 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564993 M 3 0 1 PFKFB3 HuRef nsv825235 10 6291821 6292426 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1436020,nssv1440505,nssv1421909,nssv1433020,nssv1438305 M 31 0 5 PFKFB3 NA18564,NA18566,NA18951,NA18972,NA18997 nsv512142 10 6291846 6292964 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624703 M 1 0 1 PFKFB3 1 esv1353057 10 6292529 6292879 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4166891 M 2 0 1 PFKFB3 HuRef nsv24567 10 6292543 6292892 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv43145 M 24 PFKFB3 nsv437094 10 6298439 6301710 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466975 M 60 0 1 PFKFB3 NA10831 esv3306994 10 6311118 6311119 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7809469,essv7814567,essv7772334,essv7791626,essv7803230,essv7825131,essv7834185,essv7811455,essv7828612,essv7817005,essv7784055,essv7817586,essv7821517,essv7781019,essv7806944,essv7787285,essv7808160,essv7792091 M 185 18 0 PFKFB3 NA07037,NA07346,NA11840,NA12006,NA12144,NA12154,NA12749,NA12812,NA12874,NA18502,NA18519,NA18523,NA18561,NA18605,NA18638,NA18871,NA19108,NA19147 esv3438991 10 6311120 6311134 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8946710,essv8946712,essv8946711,essv8946702,essv8946705,essv8946709,essv8946704,essv8946708,essv8946700,essv8946701,essv8946699,essv8946698,essv8946707,essv8946706 M 185 14 0 PFKFB3 NA07037,NA12006,NA12144,NA12154,NA12749,NA18502,NA18519,NA18523,NA18561,NA18605,NA18638,NA18871,NA19108,NA19147 esv3401171 10 6311123 6311142 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9645703,essv9645714,essv9645725 M 185 3 0 PFKFB3 NA07346,NA11840,NA12812 nsv524324 10 6334539 6334810 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700229 M 2026 1 0 "" nsv521313 10 6334810 6335554 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694432 M 2026 0 1 "" nsv528919 10 6383321 6392981 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705607 M 2026 1 0 LOC399715 nsv478706 10 6390105 6390105 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016062 M 9 1 0 LOC399715 NA18507 nsv947731 10 6391871 6393051 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1831628,nssv1831610,nssv1831632,nssv1831576,nssv1831547,nssv1831634,nssv1831625,nssv1831641,nssv1831574,nssv1831620,nssv1831548,nssv1831595,nssv1831556,nssv1831584,nssv1831568,nssv1831581,nssv1831630,nssv1831600,nssv1831624,nssv1831591,nssv1831563,nssv1831585,nssv1831558,nssv1831592,nssv1831560,nssv1831596,nssv1831631,nssv1831608,nssv1831557,nssv1831597,nssv1831551,nssv1831572,nssv1831571,nssv1831642,nssv1831623,nssv1831604,nssv1831565,nssv1831573,nssv1831550,nssv1831622,nssv1831564,nssv1831569,nssv1831575,nssv1831607,nssv1831626,nssv1831635,nssv1831561,nssv1831580,nssv1831577,nssv1831613,nssv1831552,nssv1831606,nssv1831566,nssv1831611,nssv1831555,nssv1831582,nssv1831567,nssv1831583,nssv1831629,nssv1831546,nssv1831549,nssv1831594,nssv1831559,nssv1831636,nssv1831554,nssv1831619,nssv1831570,nssv1831589,nssv1831627,nssv1831601,nssv1831553,nssv1831586,nssv1831562,nssv1831621,nssv1831578,nssv1831618,nssv1831605,nssv1831598,nssv1831612,nssv1831599,nssv1831587,nssv1831602,nssv1831590,nssv1831615,nssv1831616,nssv1831640,nssv1831603,nssv1831638,nssv1831637,nssv1831593,nssv1831614,nssv1831609,nssv1831579,nssv1831588,nssv1831617,nssv1831639,nssv1831633 M 97 10 0 LOC399715 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv5676 10 6421206 6468956 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6278,nssv11235,nssv1862,nssv5171,nssv732,nssv3863,nssv9925 M 9 0 7 "" NA12156,NA12878,NA15510,NA18507,NA18555,NA19129,NA19240 nsv519424 10 6427226 6428934 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv691151,nssv656136,nssv681777,nssv701137,nssv681186 M 2026 0 5 "" esv1611433 10 6427640 6427640 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3737802 M 2 1 0 "" HuRef nsv50 10 6433069 6462822 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv50 M 1 0 1 "" NA15510 nsv1044870 10 6433266 6459468 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3494233 M 29084 1 0 "" nsv1047165 10 6433477 6451475 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3500833 M 29084 1 0 "" nsv1051840 10 6438972 6451475 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3487558,nssv3490550,nssv3487713,nssv3493235,nssv3496565,nssv3483472,nssv3488214,nssv3497257,nssv3707676,nssv3501822,nssv3491287,nssv3486023,nssv3707678,nssv3495427,nssv3489708,nssv3707677,nssv3707679,nssv3497305,nssv3485491,nssv3494302 M 29084 9 11 "" nsv508567 10 6447688 6467643 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv617376,nssv618976,nssv620195 M 4 0 3 "" CHM,NA10860,NA15510 dgv29n16 10 6450202 6457671 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv435913,nsv436648 M 2 0 2 "" NA15510,NA18505 esv2605106 10 6450768 6458117 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5324528 M 1 0 1 "" NA18507 esv7971 10 6451307 6457927 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30412 M 1 0 0 "" esv2249734 10 6451399 6457831 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4820928 M 1 0 1 "" NA18507 nsv512143 10 6451436 6457806 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv624704 M 1 0 1 "" 1 esv1004516 10 6451516 6457740 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563548 M 3 0 1 "" HuRef esv4721 10 6451553 6457713 CNV loss Wang_et_al_2008 18987735 Sequencing essv27162 M 1 0 1 "" YH nsv498719 10 6451569 6457653 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585435 M 9 0 1 "" esv1684899 10 6451586 6457652 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3672195 M 2 0 1 "" HuRef nsv25296 10 6464366 6464366 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv43874 M 24 "" nsv1053177 10 6493313 6513120 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3502443 M 29084 0 1 PRKCQ nsv1047309 10 6535589 6754066 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3707680 M 29084 1 0 PRKCQ,PRKCQ-AS1 nsv5687 10 6577215 6596757 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8413 M 9 0 1 PRKCQ NA12156 nsv549912 10 6606981 6669231 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743528 M 17421 1 0 PRKCQ,PRKCQ-AS1 nsv507533 10 6612947 6618947 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623139,nssv619268,nssv620213 M 4 0 0 PRKCQ NA10860,NA15510,NA18994 nsv515823 10 6636248 6637083 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv664888,nssv683122 M 2026 0 2 PRKCQ nsv5698 10 6646828 6672449 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5179 M 9 1 0 PRKCQ,PRKCQ-AS1 NA19129 esv29586 10 6679156 6681566 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15693 M 40 0 3 "" NA18523,NA18916,NA19190 nsv516026 10 6679507 6679992 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv690790,nssv663464,nssv681498,nssv670224,nssv668529,nssv669490,nssv686633,nssv660028,nssv665794,nssv673580 M 2026 0 10 "" nsv437095 10 6689070 6706829 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466976 M 60 0 1 "" NA10851 esv2759730 10 6690997 6705355 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757365 M 270 0 4 "" NA07034,NA10851,NA12057,NA12717 dgv667n100 10 6691433 6704501 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1047226,nsv1055086 M 29084 0 3 "" nsv820451 10 6692122 6704430 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420851 M 1 0 1 "" NA10851 nsv8601 10 6692231 6705474 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv18350,nssv20683,nssv18175,nssv18034,nssv17152,nssv20772,nssv18645,nssv16571,nssv21863,nssv19049,nssv18667,nssv20281,nssv19067,nssv17672,nssv21471,nssv16789,nssv16895,nssv17816,nssv23310,nssv20188,nssv18786,nssv16960,nssv17694,nssv18376,nssv21554,nssv19059,nssv19538,nssv21597,nssv18498,nssv18993 M 31 30 0 "" NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv819619 10 6693820 6704202 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418595 M 2 1 0 "" AK1 esv29228 10 6694438 6704207 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13021 M 40 40 0 "" NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA11995,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv549913 10 6694791 6701227 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743529,nssv743530 M 17421 0 2 "" esv3891746 10 6694791 6702141 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25800673 M 3017 0 1 "" nsv818743 10 6694791 6702141 CNV loss Wang_et_al_2007 17921354 SNP array nssv1416256,nssv1416257 M 112 0 2 "" NA10851,NA12057 dgv950n54 10 6694791 6704160 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv549915,nsv549914,nsv549917,nsv549918,nsv549916,nsv549921,nsv549923,nsv549920,nsv549919 M 17421 0 18 "" nsv517486 10 6694791 6885243 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv691967,nssv682481,nssv674140,nssv674359,nssv689480,nssv682252,nssv701295,nssv652162,nssv685112,nssv677978,nssv689867,nssv684180,nssv674968,nssv679163 M 2026 4 10 LINC00706,LINC00707 dgv125n67 10 6695143 6704430 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825236,nsv825237 M 31 9 0 "" AK4,NA18547,NA18552,NA18566,NA18582,NA18592,NA18942,NA18947,NA18973 nsv438163 10 6695312 6702141 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv470238,nssv470237 M 269 0 2 "" NA10851,NA12057 nsv549922 10 6696085 6706829 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743548 M 17421 0 1 "" nsv549924 10 6697326 6704160 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743550 M 17421 0 1 "" nsv442171 10 6697781 6704159 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1658969,nssv1658967,nssv1658968,nssv1658966 M 270 0 4 "" NA07034,NA10851,NA12057,NA12717 dgv8e203 10 6697781 6704733 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array esv2760162,esv2763969 M 1109 0 14 "" RW_0090,RW_0181,RW_0186,RW_0201,RW_0214,RW_0233,RW_0531,RW_0554,RW_0610,SW_0120,SW_1257,SW_1332,SW_1441,SW_1452 nsv549925 10 6699395 6704160 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv743551 M 17421 0 1 "" nsv514568 10 6701263 6703900 CNV gain+loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2775591,nssv2776821,nssv2772668,nssv2770653,nssv2772071,nssv2775165,nssv2776446,nssv2777364,nssv2773769,nssv2771674,nssv2775372,nssv2768993,nssv2771537,nssv2775509,nssv2776009,nssv2775685,nssv2768614,nssv2773434,nssv2776392,nssv2770755,nssv2770350,nssv2778023,nssv2771970,nssv2777930,nssv2772538,nssv2774230,nssv2772405,nssv2770708,nssv2769916,nssv2771120,nssv2775225,nssv2770154,nssv2773111,nssv2769185,nssv2774763,nssv2776557,nssv2776548,nssv2777015,nssv2772420,nssv2771441,nssv2775901,nssv2777201,nssv2772741,nssv2772611,nssv2776115,nssv2773047,nssv2771695,nssv2773547,nssv2776982 M 2366 42 7 "" NA06994,NA0703