variantaccession chr start end varianttype variantsubtype reference pubmedid method platform mergedvariants supportingvariants mergedorsample frequency samplesize observedgains observedlosses cohortdescription genes samples nsv482937 1 1 2300000 CNV loss Iafrate_et_al_2004 15286789 BAC aCGH,FISH nssv2995976 M 39 0 1 ACAP3,AGRN,ANKRD65,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf233,C1orf86,CALML6,CCNL2,CDK11A,CDK11B,CPSF3L,DDX11L1,DVL1,FAM132A,FAM138A,FAM138F,FAM41C,FAM87B,GABRD,GLTPD1,GNB1,HES4,ISG15,KIAA1751,KLHL17,LINC00115,LINC01128,LOC100129534,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC148413,LOC254099,LOC729737,MIB2,MIR200A,MIR200B,MIR429,MIR6723,MIR6726,MIR6727,MIR6808,MIR6859-1,MIR6859-2,MMP23A,MMP23B,MORN1,MRPL20,MXRA8,NADK,NOC2L,OR4F16,OR4F29,OR4F3,OR4F5,PLEKHN1,PRKCZ,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,SKI,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM240,TMEM52,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1,WASH7P dgv1n82 1 10001 22118 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv945697,nsv945698 M 97 10 0 DDX11L1,MIR6859-1,MIR6859-2,WASH7P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7879 1 10001 127330 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv14786,nssv14785,nssv14773,nssv14772,nssv14781,nssv14771,nssv14764,nssv14775,nssv14762,nssv14766,nssv18103,nssv14777,nssv14770,nssv14789,nssv14782,nssv14788,nssv14791,nssv14784,nssv14790,nssv14787,nssv18117,nssv14776,nssv21423,nssv14763,nssv14768,nssv14783,nssv14780,nssv14774,nssv18113,nssv18093 M 31 25 1 DDX11L1,FAM138A,FAM138F,MIR6859-1,MIR6859-2,OR4F5,WASH7P NA07029,NA07048,NA10839,NA10863,NA12155,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv958854 1 10191 10281 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005193 M 1 0 1 "" BILGI_BIOE nsv428112 1 10377 177417 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450130 M 62 1 0 DDX11L1,FAM138A,FAM138F,LOC729737,MIR6859-1,MIR6859-2,OR4F5,WASH7P HGDP01088 esv2758911 1 10377 1018704 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757715,esv2756831 M 270 17 169 AGRN,C1orf159,C1orf170,DDX11L1,FAM138A,FAM138F,FAM41C,FAM87B,HES4,ISG15,KLHL17,LINC00115,LINC01128,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC729737,MIR6723,MIR6859-1,MIR6859-2,NOC2L,OR4F16,OR4F29,OR4F3,OR4F5,PLEKHN1,RNF223,SAMD11,WASH7P NA06985,NA07000,NA07019,NA07034,NA07056,NA10835,NA10838,NA10846,NA10855,NA10857,NA10860,NA10863,NA11829,NA11830,NA11832,NA11840,NA11993,NA11994,NA11995,NA12004,NA12005,NA12044,NA12056,NA12057,NA12144,NA12155,NA12234,NA12239,NA12248,NA12249,NA12740,NA12752,NA12760,NA12762,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12864,NA12865,NA12873,NA12874,NA12875,NA12891,NA18500,NA18501,NA18502,NA18505,NA18506,NA18507,NA18508,NA18516,NA18521,NA18523,NA18524,NA18529,NA18532,NA18537,NA18540,NA18545,NA18547,NA18550,NA18555,NA18558,NA18561,NA18562,NA18563,NA18566,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18593,NA18603,NA18608,NA18609,NA18611,NA18620,NA18621,NA18622,NA18623,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18858,NA18859,NA18860,NA18861,NA18862,NA18863,NA18871,NA18912,NA18913,NA18914,NA18940,NA18944,NA18947,NA18949,NA18951,NA18952,NA18956,NA18959,NA18960,NA18961,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18974,NA18975,NA18976,NA18978,NA18981,NA18990,NA18991,NA18994,NA18995,NA18997,NA18998,NA19000,NA19007,NA19094,NA19098,NA19100,NA19101,NA19102,NA19103,NA19116,NA19119,NA19120,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19142,NA19143,NA19153,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19211,NA19221,NA19222,NA19223 esv27265 1 10499 177368 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16041,esv19525,esv19430,esv20178,esv14423,esv15038,esv17542 M 40 32 6 DDX11L1,FAM138A,FAM138F,LOC729737,MIR6859-1,MIR6859-2,OR4F5,WASH7P NA06985,NA07037,NA11894,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv1147468 1 11099 47000 CNV duplication John_et_al_2014 26484159 Sequencing nssv4000242 M 1 1 0 DDX11L1,FAM138A,FAM138F,MIR6859-1,MIR6859-2,WASH7P KWB1 dgv1n106 1 11100 29200 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1141121,nsv1118423 M 2 2 0 DDX11L1,MIR6859-1,MIR6859-2,WASH7P KWS1,KWS2 dgv1e59 1 11189 36787 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3343481,esv3364878 M 185 2 0 DDX11L1,FAM138A,FAM138F,MIR6859-1,MIR6859-2,WASH7P NA12878,NA19239 nsv1076307 1 11599 72400 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3769696 M 1 1 0 DDX11L1,FAM138A,FAM138F,MIR6859-1,MIR6859-2,OR4F5,WASH7P KWP1 nsv945700 1 22118 22723 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572127,nssv2570974,nssv2571007,nssv2570996,nssv2571018,nssv2570930,nssv2570963,nssv2570941,nssv2571099,nssv2572228,nssv2570985,nssv2570952 M 97 10 0 WASH7P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945699 1 22118 35020 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755475,nssv1749217,nssv1749258,nssv1749240,nssv1749206,nssv1749226,nssv1755466,nssv1749220,nssv1755469,nssv1749252,nssv1755476,nssv1749255,nssv1755461,nssv1749209,nssv1755464,nssv1749242,nssv1749265,nssv1749221,nssv1749262,nssv1749232,nssv1749202,nssv1749213,nssv1749214,nssv1749254,nssv1755480,nssv1749237,nssv1749261,nssv1749244,nssv1749257,nssv1749219,nssv1755468,nssv1749236,nssv1755474,nssv1749215,nssv1749210,nssv1749224,nssv1755478,nssv1749246,nssv1749266,nssv1749249,nssv1755471,nssv1749239,nssv1755472,nssv1749253,nssv1755477,nssv1749251,nssv1749211,nssv1749208,nssv1755467,nssv1749235,nssv1755473,nssv1749241,nssv1749264,nssv1749205,nssv1749260,nssv1749222,nssv1755465,nssv1749229,nssv1749204,nssv1749238,nssv1755462,nssv1749218,nssv1755463,nssv1749227,nssv1749203,nssv1749248,nssv1749263,nssv1749230,nssv1755479,nssv1749228,nssv1749259,nssv1749250,nssv1749231,nssv1749233,nssv1749216,nssv1749207,nssv1749247,nssv1755460,nssv1749225,nssv1749243 M 97 10 0 FAM138A,FAM138F,WASH7P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945484 1 23661 24819 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575222,nssv2575215,nssv2576584,nssv2576570,nssv2576583,nssv2575223,nssv2575214,nssv2576549,nssv2576580,nssv2576561,nssv2570921,nssv2576560,nssv2575209,nssv2576552,nssv2575211,nssv2576562,nssv2574190,nssv2576577,nssv2576581,nssv2576186,nssv2572821,nssv2575440,nssv2570923,nssv2576574,nssv2575210,nssv2576555,nssv2572826,nssv2575224,nssv2572962,nssv2575221,nssv2572831,nssv2576556,nssv2572827,nssv2576548,nssv2576582,nssv2575217,nssv2573987,nssv2576572,nssv2572828,nssv2576563,nssv2576585,nssv2575984,nssv2572824,nssv2576085,nssv2570922,nssv2572738,nssv2575220,nssv2576566,nssv2572830,nssv2576568,nssv2570920,nssv2576565,nssv2572861,nssv2575237,nssv2574088,nssv2576573,nssv2575208,nssv2575218,nssv2572820,nssv2576557,nssv2575212,nssv2576547,nssv2572822,nssv2575338,nssv2572823,nssv2576567,nssv2572829,nssv2576559,nssv2575188,nssv2576569,nssv2575219,nssv2576578,nssv2576571,nssv2576550,nssv2576551,nssv2576558,nssv2576554,nssv2576579,nssv2575213,nssv2576576 M 97 10 0 WASH7P HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv469759 1 27980 177346 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1675941,nssv1672301,nssv1674201,nssv1673353,nssv1673181,nssv1673526,nssv1672137,nssv1675248,nssv1676076,nssv1674071,nssv1675044,nssv1675415,nssv1672641,nssv1676217 M 265 14 0 FAM138A,FAM138F,LOC729737,OR4F5,WASH7P nsv471591 1 27981 177346 CNV loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550438,nssv550437,nssv550436,nssv550435 M 48 0 4 FAM138A,FAM138F,LOC729737,OR4F5,WASH7P NA10492,NA10970,NA10971,NA17051 esv3433926 1 28989 35387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692083 M 185 1 0 FAM138A,FAM138F,WASH7P NA12892 nsv945486 1 30626 35020 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570932,nssv2570958,nssv2570933,nssv2570961,nssv2570935,nssv2570929,nssv2570927,nssv2570948,nssv2570956,nssv2570949,nssv2570939,nssv2570959,nssv2570926,nssv2570971,nssv2570976,nssv2570977,nssv2570955,nssv2570957,nssv2570953,nssv2570964,nssv2570951,nssv2570969,nssv2570970,nssv2570973,nssv2570944,nssv2570967,nssv2570975,nssv2570938,nssv2570947,nssv2570972,nssv2570966,nssv2570934,nssv2570940,nssv2570968,nssv2570931,nssv2570945,nssv2570962,nssv2570937,nssv2570942,nssv2570943,nssv2570950,nssv2570960,nssv2570946,nssv2570936,nssv2570954,nssv2570925,nssv2570928,nssv2570965 M 97 10 0 FAM138A,FAM138F HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1139462 1 32400 35100 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977049 M 2 1 0 FAM138A,FAM138F KWS2 nsv1110123 1 33700 36300 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3959388 M 2 1 0 FAM138A,FAM138F KWS1 nsv945487 1 35020 41109 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570986,nssv2570979,nssv2570980,nssv2570981,nssv2570984,nssv2570987,nssv2570989,nssv2570988,nssv2570978,nssv2570982,nssv2570983 M 97 10 0 FAM138A,FAM138F HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3411655 1 37489 43587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692270 M 185 1 0 "" NA19238 esv3430433 1 38889 40687 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692283 M 185 1 0 "" NA12878 esv3368735 1 44989 51487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692302 M 185 1 0 "" NA19238 dgv1n54 1 45531 121042 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544869,nsv544866,nsv544868 M 17421 0 3 OR4F5 esv3369077 1 45789 46987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692306 M 185 1 0 "" NA19239 esv3428396 1 45889 53987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692307 M 185 1 0 "" NA19240 nsv951399 1 46501 71800 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997203 M 1 1 0 OR4F5 BILGI_BIOE esv3439865 1 47689 51487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692320 M 185 1 0 "" NA19239 nsv544867 1 49298 82154 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707616,nssv707617 M 17421 1 1 OR4F5 nsv1112509 1 51800 52300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966608 M 2 0 1 "" KWS2 esv3335281 1 52089 54387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692333 M 185 1 0 "" NA19238 nsv1112510 1 53700 63800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966609 M 2 0 1 "" KWS2 nsv1118083 1 53900 54800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980301 M 2 0 1 "" KWS1 nsv1143416 1 55100 56000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980613 M 2 0 1 "" KWS1 nsv437198 1 55394 86303 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467079 M 60 0 1 OR4F5 NA19208 nsv1126159 1 56400 57400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984385 M 2 0 1 "" KWS1 nsv1143417 1 57600 58500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980614 M 2 0 1 "" KWS1 nsv1126160 1 61200 64200 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984386 M 2 0 1 "" KWS1 dgv2n100 1 61723 792480 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004629,nsv1010257,nsv1014330,nsv1009070,nsv998573 M 29084 41 6 FAM87B,LINC00115,LINC01128,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC729737,MIR6723,OR4F16,OR4F29,OR4F3,OR4F5 nsv999242 1 61723 824124 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479990 M 29084 0 1 FAM41C,FAM87B,LINC00115,LINC01128,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC729737,MIR6723,OR4F16,OR4F29,OR4F3,OR4F5 dgv3n100 1 61723 837073 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002580,nsv1002712,nsv1001549,nsv997879,nsv1011222,nsv1007490,nsv999814,nsv999289,nsv1013955,nsv999976,nsv1011779,nsv1009584,nsv1000964,nsv998077,nsv1011132,nsv1007952,nsv1010556,nsv1001532,nsv1012687 M 29084 59 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC729737,MIR6723,OR4F16,OR4F29,OR4F3,OR4F5 dgv2e59 1 63489 66287 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3333057,esv3353898 M 185 2 0 "" NA19238,NA19240 dgv2n106 1 65800 66900 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1143418,nsv1130934 M 2 0 2 "" KWS1,KWS2 nsv437859 1 66008 79078 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv471090,nssv469962,nssv468851,nssv471201,nssv471312,nssv470979,nssv467740,nssv471423 M 269 0 8 OR4F5 NA10831,NA10857,NA12044,NA12155,NA18912,NA18914,NA19207,NA19208 dgv3e59 1 66789 68887 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3366041,esv3341557,esv3441117 M 185 3 0 "" NA19238,NA19239,NA19240 nsv514929 1 68497 70627 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2866525,nssv2862715,nssv2864991,nssv2858700,nssv2862825,nssv2861378,nssv2866508,nssv2860772,nssv2867544,nssv2858825,nssv2860032,nssv2866245,nssv2861677,nssv2867651,nssv2864238,nssv2862192,nssv2859788,nssv2859644,nssv2864295,nssv2866269,nssv2860178,nssv2859388,nssv2866887,nssv2860971,nssv2861109,nssv2867398,nssv2861262,nssv2864208,nssv2866706,nssv2864968,nssv2868431,nssv2868486,nssv2867418,nssv2860024,nssv2859680,nssv2861190,nssv2868183,nssv2864331,nssv2864815,nssv2862335,nssv2861727,nssv2863165,nssv2864118,nssv2862199,nssv2865611,nssv2863340,nssv2859613,nssv2859496,nssv2865754,nssv2866198,nssv2861598,nssv2868367,nssv2867539,nssv2864949,nssv2864124,nssv2860984,nssv2865753,nssv2864820,nssv2864107,nssv2866178,nssv2866786,nssv2859864,nssv2861708,nssv2861048,nssv2862848,nssv2867664,nssv2863400,nssv2863591,nssv2862869,nssv2866377,nssv2863605,nssv2868005,nssv2860629,nssv2862365,nssv2859331,nssv2862138,nssv2863278,nssv2858788,nssv2867226,nssv2868166,nssv2861692,nssv2862935,nssv2859426,nssv2866470,nssv2861479,nssv2861909,nssv2860077,nssv2864526,nssv2861962,nssv2861660,nssv2864999,nssv2866559,nssv2867567,nssv2864647,nssv2860673,nssv2868137,nssv2863454,nssv2868108,nssv2860212,nssv2862349,nssv2859667,nssv2866214,nssv2861368,nssv2860242,nssv2859048,nssv2862506,nssv2866676,nssv2861611,nssv2865098,nssv2863788,nssv2865034,nssv2863719,nssv2863666,nssv2860563,nssv2864317,nssv2860187,nssv2866371,nssv2860399,nssv2865361,nssv2865011,nssv2865749,nssv2859630,nssv2865937,nssv2859451,nssv2863565,nssv2863379,nssv2860819,nssv2864621,nssv2859105,nssv2863563,nssv2866448,nssv2862629,nssv2859125,nssv2867808,nssv2861540,nssv2864540,nssv2859547,nssv2858735,nssv2864744,nssv2863356,nssv2860422,nssv2865664,nssv2866282,nssv2860682,nssv2859919,nssv2859384,nssv2862492,nssv2866673,nssv2858675,nssv2868000,nssv2863543,nssv2860690,nssv2866257,nssv2860722,nssv2867827,nssv2859022,nssv2864340,nssv2858799,nssv2863524,nssv2867343,nssv2867873,nssv2858896,nssv2864843,nssv2867549,nssv2867504,nssv2867650,nssv2860627,nssv2862970,nssv2867901,nssv2866062,nssv2860782,nssv2864750,nssv2863101,nssv2858575,nssv2865409,nssv2862824,nssv2866480,nssv2864418,nssv2862774,nssv2866655,nssv2864878,nssv2864517,nssv2862096,nssv2866940,nssv2863485,nssv2858768,nssv2864900,nssv2864277,nssv2859079,nssv2860715,nssv2861958,nssv2859822,nssv2865279,nssv2858870,nssv2866593,nssv2860789,nssv2866855,nssv2862796,nssv2863568,nssv2858528,nssv2864356,nssv2860935,nssv2860233,nssv2859914,nssv2865555,nssv2867787,nssv2859204,nssv2858866,nssv2858998,nssv2866252,nssv2860623,nssv2862589,nssv2860343,nssv2864859,nssv2859883,nssv2864514,nssv2865860,nssv2867208,nssv2867410,nssv2864218,nssv2863855,nssv2861308,nssv2859842,nssv2867841,nssv2863257,nssv2858559,nssv2865484,nssv2866045,nssv2863432,nssv2861515,nssv2863237,nssv2862898,nssv2864915,nssv2865735,nssv2859274,nssv2866294,nssv2860704,nssv2865160,nssv2862223,nssv2863993,nssv2865293,nssv2868096,nssv2865417,nssv2864239,nssv2867535,nssv2861561,nssv2859094,nssv2865129,nssv2866234,nssv2862812,nssv2862647,nssv2867616,nssv2863085,nssv2860747,nssv2862633,nssv2864825,nssv2861101,nssv2867263,nssv2859968,nssv2860788,nssv2861183,nssv2867259,nssv2867728,nssv2859290,nssv2867399,nssv2861396,nssv2865284,nssv2864672,nssv2863214,nssv2865957,nssv2865841,nssv2866522,nssv2864864,nssv2866148,nssv2867224,nssv2860020,nssv2862601,nssv2863010,nssv2864246,nssv2862930,nssv2862650,nssv2867485,nssv2862436,nssv2860672,nssv2861250,nssv2863534,nssv2860124,nssv2865669,nssv2863065,nssv2864712,nssv2862006,nssv2862385,nssv2865588,nssv2868419,nssv2860838,nssv2859063,nssv2863089,nssv2865874,nssv2862713,nssv2865947,nssv2860942,nssv2859776,nssv2862087,nssv2865815,nssv2858884,nssv2866359,nssv2868151,nssv2862538,nssv2861172,nssv2862788,nssv2867619,nssv2863617,nssv2862418,nssv2865146,nssv2867078,nssv2860687,nssv2868351,nssv2865369,nssv2860210,nssv2867596,nssv2867142,nssv2861367,nssv2859301,nssv2867781,nssv2867083,nssv2863363,nssv2866507,nssv2863171,nssv2867294,nssv2864020,nssv2859541,nssv2861581,nssv2862159,nssv2867849,nssv2868077,nssv2860951,nssv2863944,nssv2859117,nssv2867498,nssv2863149,nssv2863102,nssv2860335,nssv2865147,nssv2867615,nssv2861512,nssv2867068,nssv2868296,nssv2858755,nssv2860945,nssv2860526,nssv2866382,nssv2866560,nssv2862299,nssv2859104,nssv2860681,nssv2867381,nssv2867452,nssv2863950,nssv2867562,nssv2868423,nssv2860253,nssv2867258,nssv2859489,nssv2863741,nssv2860832,nssv2859693,nssv2864530,nssv2866813,nssv2867969,nssv2863069,nssv2864852,nssv2859934,nssv2868265,nssv2859861,nssv2867088,nssv2859540,nssv2861485,nssv2859712,nssv2860038,nssv2863842,nssv2866078,nssv2860825,nssv2865521,nssv2865964,nssv2860414,nssv2861154,nssv2865040,nssv2859332,nssv2865003,nssv2861240,nssv2868454,nssv2866378,nssv2864123,nssv2858633,nssv2867588,nssv2866610,nssv2862317,nssv2858702,nssv2866438,nssv2862733,nssv2863732,nssv2862690,nssv2867603,nssv2864040,nssv2862501,nssv2866307,nssv2860153,nssv2863459,nssv2858572,nssv2865628,nssv2864983,nssv2867670,nssv2860365,nssv2867174,nssv2866514,nssv2860595,nssv2861553,nssv2862080,nssv2866290,nssv2862036,nssv2867361,nssv2861924,nssv2863393,nssv2859135,nssv2865468,nssv2865827,nssv2865928,nssv2858883,nssv2858644,nssv2859869,nssv2859927,nssv2864910,nssv2865228,nssv2867938,nssv2860333,nssv2861997,nssv2859913,nssv2864702,nssv2868413,nssv2863896,nssv2863475,nssv2862291,nssv2866018,nssv2865665,nssv2865029,nssv2860254,nssv2867462,nssv2863164,nssv2864501,nssv2862868,nssv2859300,nssv2862079,nssv2858941,nssv2866623,nssv2862362,nssv2858615,nssv2861391,nssv2865416,nssv2865513,nssv2863709,nssv2868209,nssv2867681,nssv2866710,nssv2860873,nssv2864873,nssv2865483,nssv2860437,nssv2859448,nssv2864223,nssv2860377,nssv2858540,nssv2861327,nssv2866509,nssv2865168,nssv2865643,nssv2861618,nssv2860286,nssv2862350,nssv2867920,nssv2866778,nssv2864784,nssv2866100,nssv2863552,nssv2867583,nssv2864902,nssv2859964,nssv2862780,nssv2863060 M 2366 488 0 OR4F5 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv544870 1 73202 137452 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707620 M 17421 0 1 LOC729737 nsv1112511 1 74600 75100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968385,nssv3984387 M 2 0 2 "" KWS1,KWS2 dgv3n106 1 75800 90300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1143419,nsv1130935 M 2 0 2 "" KWS1,KWS2 nsv945701 1 77882 88084 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749294,nssv1750429,nssv1749271,nssv1749308,nssv1750673,nssv1749296,nssv1749284,nssv1749372,nssv1749269,nssv1750496,nssv1749275,nssv1750551,nssv1749272,nssv1749383,nssv1749282,nssv1749305,nssv1750662,nssv1749438,nssv1749299,nssv1750440,nssv1749273,nssv1749295,nssv1749280,nssv1749450,nssv1749290,nssv1750451,nssv1749288,nssv1749303,nssv1749283,nssv1750540,nssv1749274,nssv1749361,nssv1749285,nssv1749394,nssv1750618,nssv1750518,nssv1750640,nssv1749472,nssv1749302,nssv1749297,nssv1749292,nssv1749405,nssv1749276,nssv1749268,nssv1750695,nssv1749427,nssv1749287,nssv1749483,nssv1749286,nssv1749416,nssv1750629,nssv1750485,nssv1750684,nssv1749350,nssv1749298,nssv1750462,nssv1749277,nssv1750418,nssv1749270,nssv1749315,nssv1750607,nssv1749293,nssv1749291,nssv1749307,nssv1750596,nssv1750507,nssv1750651,nssv1750584,nssv1749281,nssv1750562,nssv1749279,nssv1750573,nssv1749306,nssv1749339,nssv1750529,nssv1749301,nssv1749461,nssv1749326,nssv1750473,nssv1749304 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1077274 1 83999 86600 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3768323 M 1 1 0 "" KWP1 nsv945702 1 88084 91317 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751730,nssv1751761,nssv1751697,nssv1751771,nssv1751653,nssv1751763,nssv1751708,nssv1751751,nssv1751767,nssv1751746,nssv1751748,nssv1751755,nssv1751757,nssv1751675,nssv1751766,nssv1751760,nssv1751750,nssv1751737,nssv1751741,nssv1751734,nssv1751739,nssv1751770,nssv1751756,nssv1751764,nssv1751742,nssv1751773,nssv1751735,nssv1751740,nssv1751744,nssv1750707,nssv1751686,nssv1751749,nssv1751719,nssv1751747,nssv1751758,nssv1751736,nssv1751762,nssv1751752,nssv1751745,nssv1751753,nssv1751738,nssv1750718,nssv1751769,nssv1751733,nssv1751772,nssv1751664,nssv1751768,nssv1751759 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv161172 1 88190 89153 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179750 M 24 "" nsv1126161 1 91000 92100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984388 M 2 0 1 "" KWS1 nsv945705 1 91317 93605 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571009,nssv2571010,nssv2571000,nssv2570999,nssv2571013,nssv2568030,nssv2571016,nssv2570998,nssv2571001,nssv2571017,nssv2571014,nssv2571012,nssv2571003,nssv2568844,nssv2570995,nssv2568834,nssv2571032,nssv2568842,nssv2568832,nssv2568846,nssv2568837,nssv2568033,nssv2570997,nssv2571043,nssv2571020,nssv2571076,nssv2571005,nssv2571087,nssv2568831,nssv2570993,nssv2571008,nssv2568843,nssv2568031,nssv2568839,nssv2568840,nssv2568035,nssv2568034,nssv2571021,nssv2568830,nssv2571022,nssv2571065,nssv2571122,nssv2571019,nssv2568036,nssv2571004,nssv2568032,nssv2571011,nssv2571006,nssv2568845,nssv2571100,nssv2571002,nssv2571111,nssv2568835,nssv2568836,nssv2568833,nssv2568841,nssv2571015,nssv2570994,nssv2571054,nssv2568838 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945704 1 91317 125400 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751782,nssv1751831,nssv1751792,nssv1751774,nssv1751795,nssv1751845,nssv1751785,nssv1751836,nssv1751860,nssv1751837,nssv1751779,nssv1751830,nssv1751777,nssv1751846,nssv1751856,nssv1751816,nssv1751806,nssv1751847,nssv1751800,nssv1751817,nssv1751798,nssv1751841,nssv1751858,nssv1751822,nssv1751796,nssv1751850,nssv1751780,nssv1751851,nssv1751809,nssv1751805,nssv1751859,nssv1751811,nssv1751784,nssv1751814,nssv1751802,nssv1751829,nssv1751857,nssv1751839,nssv1751853,nssv1751849,nssv1751793,nssv1751803,nssv1751852,nssv1751826,nssv1751778,nssv1751833,nssv1751861,nssv1751824,nssv1751855,nssv1751842,nssv1751783,nssv1751812,nssv1751862,nssv1751834,nssv1751786,nssv1751820,nssv1751791,nssv1751835,nssv1751781,nssv1751815,nssv1751807,nssv1751825,nssv1751775,nssv1751838,nssv1751789,nssv1751801,nssv1751794,nssv1751848,nssv1751790,nssv1751823,nssv1751797,nssv1751804,nssv1751813,nssv1751844,nssv1751819,nssv1751818,nssv1751840,nssv1751827,nssv1751808,nssv1751828 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv4e59 1 91589 98387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3379005,esv3411984 M 185 2 0 "" NA19239,NA19240 nsv951073 1 93001 116200 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997314 M 1 1 0 "" BILGI_BIOE nsv945494 1 93605 95437 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2568857,nssv2568900,nssv2568854,nssv2569109,nssv2568850,nssv2568852,nssv2568855,nssv2568861,nssv2569087,nssv2569098,nssv2569032,nssv2569131,nssv2568859,nssv2568878,nssv2568860,nssv2569021,nssv2568864,nssv2568889,nssv2568944,nssv2568933,nssv2568922,nssv2568851,nssv2568858,nssv2569010,nssv2568856,nssv2568847,nssv2569076,nssv2568853,nssv2568868,nssv2568988,nssv2568999,nssv2568849,nssv2568848,nssv2568862,nssv2568966,nssv2570000,nssv2568955,nssv2568865,nssv2569065,nssv2569120,nssv2568977,nssv2569043,nssv2569989,nssv2568867,nssv2568911,nssv2568863,nssv2569054,nssv2569978,nssv2568866 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3436859 1 93889 96487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692418 M 185 1 0 "" NA19238 nsv945495 1 95437 96652 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570099,nssv2571171,nssv2570044,nssv2571178,nssv2570088,nssv2570220,nssv2570132,nssv2570209,nssv2571168,nssv2570264,nssv2571177,nssv2570242,nssv2570011,nssv2570198,nssv2571179,nssv2571173,nssv2570154,nssv2570110,nssv2571169,nssv2570033,nssv2571176,nssv2570187,nssv2570055,nssv2571190,nssv2571181,nssv2571183,nssv2571189,nssv2571185,nssv2571188,nssv2571170,nssv2571180,nssv2571160,nssv2570231,nssv2570253,nssv2570275,nssv2571182,nssv2570066,nssv2570077,nssv2571174,nssv2570165,nssv2571175,nssv2570176,nssv2570022,nssv2571184,nssv2570143,nssv2571187,nssv2571172,nssv2571186,nssv2570121 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945496 1 96652 98749 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571201,nssv2571212,nssv2571194,nssv2571209,nssv2571198,nssv2571206,nssv2571199,nssv2571215,nssv2571227,nssv2571203,nssv2571220,nssv2571208,nssv2571213,nssv2571226,nssv2571210,nssv2571207,nssv2571196,nssv2571221,nssv2571219,nssv2571233,nssv2571214,nssv2571223,nssv2571222,nssv2571236,nssv2571192,nssv2571200,nssv2571239,nssv2571234,nssv2571202,nssv2571191,nssv2571225,nssv2571211,nssv2571235,nssv2571224,nssv2571205,nssv2571238,nssv2571231,nssv2571229,nssv2571228,nssv2571193,nssv2571195,nssv2571232,nssv2571230,nssv2571197,nssv2571237,nssv2571218,nssv2571217,nssv2571216,nssv2571204 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945498 1 98749 105358 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571250,nssv2571260,nssv2571243,nssv2571288,nssv2571247,nssv2571287,nssv2571248,nssv2571253,nssv2571256,nssv2571251,nssv2571261,nssv2571276,nssv2571263,nssv2571272,nssv2571279,nssv2571266,nssv2571283,nssv2571282,nssv2571286,nssv2571270,nssv2571281,nssv2571262,nssv2571285,nssv2571271,nssv2571277,nssv2571284,nssv2571274,nssv2571269,nssv2571259,nssv2571252,nssv2571249,nssv2571275,nssv2571246,nssv2571264,nssv2571273,nssv2571280,nssv2571257,nssv2571255,nssv2571241,nssv2571267,nssv2571278,nssv2571268,nssv2571245,nssv2571258,nssv2571244,nssv2571265,nssv2571242,nssv2571254 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3431809 1 99689 100887 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692423 M 185 1 0 "" NA19240 dgv5e59 1 103089 105787 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3336840,esv3329998 M 185 2 0 "" NA19239,NA19240 nsv945500 1 105358 120257 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571299,nssv2571350,nssv2571297,nssv2571321,nssv2571292,nssv2571304,nssv2571296,nssv2571331,nssv2571301,nssv2571333,nssv2571330,nssv2571314,nssv2571372,nssv2571319,nssv2571332,nssv2571325,nssv2571295,nssv2571327,nssv2571317,nssv2571324,nssv2571311,nssv2571293,nssv2571309,nssv2571323,nssv2571310,nssv2571305,nssv2571306,nssv2571300,nssv2571361,nssv2571303,nssv2571329,nssv2571328,nssv2571318,nssv2571339,nssv2571322,nssv2571308,nssv2571298,nssv2571315,nssv2571316,nssv2571307,nssv2571302,nssv2571313,nssv2571290,nssv2571326,nssv2571294,nssv2571291,nssv2571320,nssv2571312 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1076308 1 106699 119600 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3767989 M 1 1 0 "" KWP1 dgv6e59 1 106789 109187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3349278,esv3427619 M 185 2 0 "" NA19238,NA19239 esv3441565 1 106789 111287 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692436 M 185 1 0 "" NA19240 nsv1128580 1 106800 112800 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960491 M 2 1 0 "" KWS1 esv3335040 1 109889 111187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692439 M 185 1 0 "" NA19239 nsv1141123 1 116700 118900 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3992630 M 2 1 0 "" KWS2 nsv945503 1 120257 124525 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572417,nssv2572681,nssv2571460,nssv2572406,nssv2572395,nssv2572593,nssv2571416,nssv2572450,nssv2572461,nssv2572615,nssv2573671,nssv2573770,nssv2572516,nssv2573693,nssv2573638,nssv2573627,nssv2573704,nssv2572670,nssv2572582,nssv2572494,nssv2573660,nssv2571438,nssv2573737,nssv2571449,nssv2572505,nssv2573715,nssv2571427,nssv2572439,nssv2572571,nssv2572428,nssv2572472,nssv2572692,nssv2571394,nssv2572659,nssv2573726,nssv2572483,nssv2573649,nssv2572648,nssv2572527,nssv2571405,nssv2573759,nssv2572560,nssv2572538,nssv2572549,nssv2573748,nssv2572637,nssv2572604,nssv2573682,nssv2572626 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv2n54 1 121042 137674 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544871,nsv544872 M 17421 0 2 LOC729737 nsv544873 1 121042 170730 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707623 M 17421 1 0 LOC729737 nsv1118424 1 122200 125000 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3958930 M 2 1 0 "" KWS1 nsv945707 1 125400 129243 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573788,nssv2573814,nssv2573802,nssv2573845,nssv2573856,nssv2573844,nssv2573807,nssv2573827,nssv2573803,nssv2573819,nssv2573797,nssv2573838,nssv2573796,nssv2573817,nssv2573853,nssv2573828,nssv2573857,nssv2573826,nssv2573795,nssv2573847,nssv2573798,nssv2573808,nssv2573789,nssv2573835,nssv2573794,nssv2573830,nssv2573787,nssv2573809,nssv2573861,nssv2573834,nssv2573801,nssv2573849,nssv2573804,nssv2573850,nssv2573860,nssv2573822,nssv2573784,nssv2573863,nssv2573858,nssv2573839,nssv2573862,nssv2573840,nssv2573859,nssv2573848,nssv2573792,nssv2573832,nssv2573785,nssv2573851,nssv2573812,nssv2573831,nssv2573786,nssv2573824,nssv2573790,nssv2573781,nssv2573854,nssv2573818,nssv2573805,nssv2573821,nssv2573811,nssv2573841,nssv2573800,nssv2573816,nssv2573855,nssv2573806,nssv2573799,nssv2573837,nssv2573793,nssv2573825,nssv2573791,nssv2573842,nssv2573813,nssv2573823,nssv2573815,nssv2573846,nssv2573843,nssv2573829,nssv2573852,nssv2573810,nssv2573836,nssv2573820,nssv2573833 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945706 1 125400 176984 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751879,nssv1751491,nssv1751875,nssv1751486,nssv1751871,nssv1751490,nssv1751895,nssv1751498,nssv1751877,nssv1751575,nssv1751510,nssv1751520,nssv1751880,nssv1751531,nssv1751508,nssv1751929,nssv1751511,nssv1751896,nssv1751868,nssv1752909,nssv1751506,nssv1751476,nssv1751504,nssv1751502,nssv1751503,nssv1751513,nssv1751870,nssv1752953,nssv1751885,nssv1751482,nssv1751888,nssv1751542,nssv1751509,nssv1751480,nssv1751884,nssv1751951,nssv1751878,nssv1751497,nssv1751890,nssv1751918,nssv1751869,nssv1751499,nssv1751867,nssv1751478,nssv1751866,nssv1751481,nssv1751507,nssv1751495,nssv1751894,nssv1751902,nssv1751864,nssv1751586,nssv1751873,nssv1751477,nssv1751886,nssv1751893,nssv1751881,nssv1751485,nssv1751897,nssv1751907,nssv1751872,nssv1751494,nssv1751512,nssv1751900,nssv1751882,nssv1751597,nssv1751883,nssv1752942,nssv1751505,nssv1751940,nssv1751874,nssv1751488,nssv1751892,nssv1752931,nssv1751500,nssv1751483,nssv1751863,nssv1751564,nssv1751492,nssv1751487,nssv1751903,nssv1751496,nssv1751891,nssv1752964,nssv1751479,nssv1751484,nssv1751501,nssv1752920,nssv1751514,nssv1751493,nssv1751901,nssv1751553,nssv1752887,nssv1751904,nssv1752898,nssv1751489,nssv1751889 M 97 10 0 LOC729737 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1139463 1 126200 128500 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977050 M 2 1 0 "" KWS2 nsv945504 1 129243 133502 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574859,nssv2574853,nssv2574865,nssv2574856,nssv2573873,nssv2573912,nssv2573883,nssv2573910,nssv2574866,nssv2573889,nssv2573874,nssv2573911,nssv2574861,nssv2574852,nssv2573876,nssv2573915,nssv2573866,nssv2574854,nssv2573893,nssv2573900,nssv2573880,nssv2573890,nssv2573888,nssv2573922,nssv2573884,nssv2573921,nssv2573878,nssv2573901,nssv2573871,nssv2573918,nssv2573882,nssv2573908,nssv2573892,nssv2573895,nssv2573867,nssv2573906,nssv2573877,nssv2573899,nssv2573868,nssv2573887,nssv2574860,nssv2573909,nssv2574858,nssv2573898,nssv2573879,nssv2573925,nssv2574864,nssv2573920,nssv2573865,nssv2573896,nssv2573870,nssv2573894,nssv2574863,nssv2573927,nssv2574862,nssv2573919,nssv2573872,nssv2573926,nssv2573886,nssv2573864,nssv2573881,nssv2573897,nssv2573885,nssv2573902,nssv2573875,nssv2573914,nssv2574867,nssv2573905,nssv2573869,nssv2574857,nssv2573904,nssv2574855,nssv2573913,nssv2573924,nssv2573903,nssv2573923,nssv2573907,nssv2573916,nssv2573917,nssv2573891 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1149021 1 130299 144500 CNV duplication John_et_al_2014 26484159 Sequencing nssv3997807 M 1 1 0 LOC729737 KWB1 nsv1124554 1 135100 148500 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976608 M 2 1 0 LOC729737 KWS2 esv991724 1 136181 137326 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586083 M 3 0 1 LOC729737 HuRef esv3357639 1 136289 137487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691773 M 185 1 0 LOC729737 NA19240 nsv1075360 1 136799 142500 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3762893 M 1 1 0 LOC729737 KWP1 nsv1115325 1 164000 168200 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976377 M 2 1 0 "" KWS2 nsv8990 1 176262 177360 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv14779 M 31 0 1 "" NA18572 nsv945708 1 227418 235991 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753658,nssv1753631,nssv1752356,nssv1753632,nssv2575119,nssv1753629,nssv1752543,nssv1753577,nssv1752301,nssv1753623,nssv1753665,nssv1753654,nssv2575112,nssv1753522,nssv2575116,nssv1753640,nssv1753661,nssv1752477,nssv1753663,nssv1753626,nssv1753664,nssv1753655,nssv1753662,nssv1753653,nssv1752565,nssv1753671,nssv1752444,nssv1753636,nssv1752334,nssv2575120,nssv1751619,nssv1753566,nssv1752290,nssv1753634,nssv1752455,nssv1752554,nssv1752378,nssv1753675,nssv1753659,nssv1753669,nssv1752389,nssv1753630,nssv1752433,nssv2575111,nssv1752488,nssv1753500,nssv1752466,nssv1753621,nssv1752279,nssv1753652,nssv1752268,nssv1753668,nssv1752323,nssv1753635,nssv1751641,nssv1753624,nssv1752367,nssv1752499,nssv1752400,nssv1753642,nssv1753656,nssv1753637,nssv1753657,nssv2575113,nssv1751630,nssv1753651,nssv1752312,nssv1753646,nssv1753660,nssv1753544,nssv2575117,nssv1753533,nssv1752345,nssv1753628,nssv1752532,nssv1753641,nssv1752411,nssv2575115,nssv1752422,nssv1753673,nssv1753511,nssv1752521,nssv1753625,nssv1753588,nssv1753647,nssv1752510,nssv1753633,nssv1751608,nssv1753644,nssv1753627,nssv1753643,nssv1753670,nssv1753648,nssv2575110,nssv1753649,nssv1753639,nssv1753650,nssv2575114,nssv1753674,nssv1753645,nssv1753672,nssv1753555,nssv1753599,nssv1753638,nssv2575118,nssv1753667,nssv1753666,nssv1753610 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1115326 1 227500 252100 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976378 M 2 1 0 "" KWS2 nsv953122 1 227601 267200 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001722 M 1 1 0 "" BILGI_BIOE dgv4n100 1 228694 888659 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998917,nsv1000176,nsv1010877,nsv1005920,nsv998987,nsv1000603 M 29084 8 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,MIR6723,NOC2L,OR4F16,OR4F29,OR4F3,SAMD11 dgv7e59 1 229889 238787 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3413313,esv3431827,esv3432331 M 185 3 0 "" NA12878,NA19239,NA19240 nsv1147595 1 230099 264900 CNV duplication John_et_al_2014 26484159 Sequencing nssv3996382 M 1 1 0 "" KWB1 esv3337205 1 231089 235687 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692128 M 185 1 0 "" NA12892 nsv1110124 1 231100 267600 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3959389 M 2 1 0 "" KWS1 nsv1077275 1 233499 237900 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3766129 M 1 1 0 "" KWP1 nsv945509 1 235991 239416 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575131,nssv2574771,nssv2575124,nssv2574769,nssv2575129,nssv2574765,nssv2575128,nssv2574787,nssv2574766,nssv2575122,nssv2574784,nssv2574764,nssv2574785,nssv2574772,nssv2574759,nssv2574789,nssv2575132,nssv2574762,nssv2574793,nssv2575130,nssv2574773,nssv2574770,nssv2575125,nssv2574786,nssv2574788,nssv2575127,nssv2574768,nssv2575126,nssv2574776,nssv2574779,nssv2575123,nssv2574794,nssv2574782,nssv2574763,nssv2574760,nssv2574761,nssv2574775,nssv2574790,nssv2574777,nssv2574774,nssv2574781,nssv2574791,nssv2574780,nssv2574767,nssv2574758,nssv2574783,nssv2574792,nssv2574778 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945710 1 239416 241557 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574802,nssv2574796,nssv2574804,nssv2574795,nssv2574797,nssv2574799,nssv2574801,nssv2574803,nssv2574805,nssv2574800,nssv2574798 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945709 1 239416 267719 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753696,nssv1754445,nssv1754577,nssv1753721,nssv1754632,nssv1754456,nssv1754621,nssv1753723,nssv1753677,nssv1753706,nssv1753698,nssv1753752,nssv1753697,nssv1754478,nssv1753694,nssv1753796,nssv1753690,nssv1753774,nssv1754588,nssv1753713,nssv1753693,nssv1753702,nssv1753691,nssv1753712,nssv1753680,nssv1754522,nssv1754643,nssv1753724,nssv1754610,nssv1754511,nssv1754665,nssv1753716,nssv1753678,nssv1754500,nssv1753705,nssv1753676,nssv1753688,nssv1753717,nssv1753707,nssv1754467,nssv1753685,nssv1754423,nssv1753689,nssv1753720,nssv1754566,nssv1753718,nssv1753682,nssv1753730,nssv1754599,nssv1754489,nssv1753695,nssv1753741,nssv1753686,nssv1753722,nssv1753683,nssv1754533,nssv1753679,nssv1753699,nssv1753681,nssv1753763,nssv1754654,nssv1753785,nssv1753684,nssv1753710,nssv1753692,nssv1754434,nssv1753700,nssv1753714,nssv1753704,nssv1753709,nssv1753687,nssv1754544,nssv1754555,nssv1753701,nssv1753719,nssv1753708,nssv1753711,nssv1753715,nssv1753725,nssv1753703 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3424705 1 241289 243587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692166 M 185 1 0 "" NA19240 nsv945510 1 241557 243899 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574814,nssv2575751,nssv2574813,nssv2574815,nssv2574809,nssv2574828,nssv2574816,nssv2574824,nssv2574836,nssv2574840,nssv2574850,nssv2574838,nssv2574835,nssv2574841,nssv2574822,nssv2574839,nssv2574851,nssv2574818,nssv2574811,nssv2574830,nssv2574825,nssv2574821,nssv2574834,nssv2574829,nssv2574808,nssv2575749,nssv2574844,nssv2574831,nssv2574849,nssv2575750,nssv2574826,nssv2574848,nssv2574827,nssv2574846,nssv2574810,nssv2574843,nssv2574807,nssv2574819,nssv2574845,nssv2574842,nssv2574832,nssv2574837,nssv2574847,nssv2574820,nssv2574812,nssv2574823,nssv2574833,nssv2574817 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945513 1 243899 244733 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575762,nssv2575778,nssv2575759,nssv2575790,nssv2575760,nssv2575798,nssv2575755,nssv2575793,nssv2575779,nssv2575797,nssv2575791,nssv2575777,nssv2575787,nssv2575782,nssv2575773,nssv2575784,nssv2575761,nssv2575801,nssv2575799,nssv2575763,nssv2575772,nssv2575767,nssv2575796,nssv2575774,nssv2575795,nssv2575792,nssv2575781,nssv2575785,nssv2575771,nssv2575758,nssv2575764,nssv2575776,nssv2575789,nssv2575800,nssv2575770,nssv2575775,nssv2575780,nssv2575754,nssv2575786,nssv2575788,nssv2575768,nssv2575753,nssv2575766,nssv2575783,nssv2575765,nssv2575756,nssv2575769,nssv2575757,nssv2575794 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945514 1 244733 245785 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575811,nssv2575828,nssv2575808,nssv2575837,nssv2575809,nssv2575834,nssv2575804,nssv2575821,nssv2575845,nssv2575807,nssv2575843,nssv2575838,nssv2575818,nssv2575840,nssv2575813,nssv2575810,nssv2575825,nssv2575823,nssv2575827,nssv2575826,nssv2575802,nssv2575836,nssv2575844,nssv2575822,nssv2575846,nssv2575833,nssv2575847,nssv2575806,nssv2575848,nssv2575839,nssv2575803,nssv2575831,nssv2575814,nssv2575812,nssv2575819,nssv2575817,nssv2575841,nssv2575835,nssv2575842,nssv2575805,nssv2575849,nssv2575816,nssv2575832,nssv2575824,nssv2575820,nssv2575815,nssv2575829,nssv2575830 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3352725 1 244989 247187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692188 M 185 1 0 "" NA19239 esv3390070 1 245689 247287 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692193 M 185 1 0 "" NA19240 nsv945516 1 245785 258070 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575860,nssv2575881,nssv2575857,nssv2568292,nssv2575858,nssv2575870,nssv2575853,nssv2575856,nssv2568298,nssv2575869,nssv2575868,nssv2575867,nssv2575866,nssv2568301,nssv2575861,nssv2575852,nssv2575879,nssv2569140,nssv2568294,nssv2568295,nssv2575882,nssv2569139,nssv2575875,nssv2575876,nssv2575855,nssv2575864,nssv2575851,nssv2575874,nssv2575865,nssv2575878,nssv2569138,nssv2575854,nssv2568296,nssv2568293,nssv2575880,nssv2575871,nssv2568300,nssv2575862,nssv2568291,nssv2575877,nssv2569141,nssv2575883,nssv2568297,nssv2575859,nssv2568299,nssv2575863,nssv2575872,nssv2575873 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3416780 1 249489 251587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692195 M 185 1 0 "" NA19239 esv3413391 1 249489 254187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692196 M 185 1 0 "" NA19240 esv3347825 1 250289 251587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692199 M 185 1 0 "" NA19238 esv3381085 1 252089 255387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692200 M 185 1 0 "" NA19239 esv3405973 1 252189 254087 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692201 M 185 1 0 "" NA19238 nsv945517 1 258070 267719 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569152,nssv2569167,nssv2569149,nssv2569174,nssv2569150,nssv2569189,nssv2569145,nssv2569186,nssv2569160,nssv2569182,nssv2569168,nssv2569184,nssv2569143,nssv2569155,nssv2569146,nssv2569157,nssv2569163,nssv2569171,nssv2569148,nssv2569165,nssv2569144,nssv2569170,nssv2569153,nssv2569175,nssv2569179,nssv2569176,nssv2569187,nssv2569180,nssv2569164,nssv2569178,nssv2569166,nssv2569177,nssv2569156,nssv2569154,nssv2569169,nssv2569172,nssv2569185,nssv2569173,nssv2569147,nssv2569161,nssv2569181,nssv2569142,nssv2569159,nssv2569162,nssv2569190,nssv2569158,nssv2569183,nssv2569151,nssv2569188 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945712 1 317720 337700 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755983,nssv1755994,nssv1756035,nssv1755988,nssv1755891,nssv1756011,nssv1754698,nssv1756007,nssv1755974,nssv1756026,nssv1754687,nssv1756047,nssv1755980,nssv1756023,nssv1755981,nssv1756004,nssv1756033,nssv1756002,nssv1756037,nssv1756005,nssv1755902,nssv1755987,nssv1756030,nssv1756013,nssv1755847,nssv1755985,nssv1755825,nssv1756020,nssv1755976,nssv1755997,nssv1756036,nssv1755982,nssv1756034,nssv1756044,nssv1755869,nssv1756024,nssv1755946,nssv1755979,nssv1755913,nssv1756028,nssv1755968,nssv1756045,nssv1755858,nssv1756015,nssv1755924,nssv1755996,nssv1754709,nssv1756039,nssv1755814,nssv1756042,nssv1756031,nssv1755975,nssv1755957,nssv1756040,nssv1756029,nssv1756021,nssv1755792,nssv1756043,nssv1756038,nssv1755989,nssv1756032,nssv1756025,nssv1755803,nssv1756009,nssv1755880,nssv1756006,nssv1755935,nssv1756003,nssv1755836,nssv1756001,nssv1754720,nssv1755998,nssv1756022,nssv1754676,nssv1756018,nssv1755995,nssv1756046,nssv1756010,nssv1756027,nssv1756041,nssv1755978,nssv1756012,nssv1756008,nssv1755984,nssv1756019,nssv1756017,nssv1756048,nssv1755999,nssv1756000,nssv1755986,nssv1756014,nssv1755991,nssv1756016,nssv1755992,nssv1755990,nssv1755993,nssv1755977 M 97 10 0 LOC100132062,LOC100132287,LOC100133331 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv428223 1 317720 471368 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450575,nssv450686 M 62 1 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 HGDP00984,NA18498 esv27883 1 317770 471337 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13367,esv9873,esv15703,esv17876,esv13800,esv10639,esv15785,esv20387,esv20401,esv16611,esv14573 M 40 13 17 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA11894,NA11993,NA12006,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18511,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19108,NA19114,NA19190,NA19225 nsv829647 1 317874 425175 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441517,nssv1441518,nssv1442628,nssv1447072,nssv1448183,nssv1444850,nssv1443739,nssv1450405,nssv1441629,nssv1449294,nssv1445961 M 95 1 10 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nsv1149141 1 318099 326800 CNV duplication John_et_al_2014 26484159 Sequencing nssv4002651 M 1 1 0 LOC100132062,LOC100132287,LOC100133331 KWB1 nsv471518 1 318139 470924 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547888,nssv547887,nssv547890 M 3 3 0 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 JDW,NA18507,YH nsv1115327 1 318300 326500 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976379 M 2 1 0 LOC100132062,LOC100132287,LOC100133331 KWS2 dgv1n14 1 321799 466601 CNV gain Cooper_et_al_2008 18776910 SNP array nsv433342,nsv433345,nsv433344 M 9 3 0 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12156,NA18555,NA19240 nsv953187 1 324101 332200 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003052 M 1 0 1 LOC100132062,LOC100132287,LOC100133331 BILGI_BIOE nsv945519 1 331680 334089 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569292,nssv2569298,nssv2569263,nssv2569295,nssv2569277,nssv2569231,nssv2569246,nssv2569300,nssv2569272,nssv2569242,nssv2569262,nssv2569252,nssv2569276,nssv2569244,nssv2569259,nssv2569237,nssv2569291,nssv2569294,nssv2569283,nssv2569229,nssv2569274,nssv2569245,nssv2569270,nssv2569236,nssv2569273,nssv2569235,nssv2569271,nssv2569241,nssv2569253,nssv2569234,nssv2569267,nssv2569251,nssv2569249,nssv2569230,nssv2569266,nssv2569247,nssv2569223,nssv2569238,nssv2569275,nssv2569239,nssv2569279,nssv2569227,nssv2569288,nssv2569233,nssv2569260,nssv2569240,nssv2569280,nssv2569301,nssv2569250,nssv2569224,nssv2569254,nssv2569296,nssv2569285,nssv2569302,nssv2569269,nssv2569228,nssv2569264,nssv2569225,nssv2569258,nssv2569226,nssv2569284,nssv2569243,nssv2569265,nssv2569232,nssv2569261,nssv2569299,nssv2569248,nssv2569297,nssv2569268,nssv2569293,nssv2569256,nssv2569281,nssv2569290,nssv2569257,nssv2569286,nssv2569282,nssv2569255,nssv2569289,nssv2569278,nssv2569287 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945520 1 334089 337700 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569306,nssv2569356,nssv2569380,nssv2569359,nssv2569320,nssv2569361,nssv2569379,nssv2569370,nssv2569317,nssv2569346,nssv2569383,nssv2569372,nssv2569316,nssv2569355,nssv2569323,nssv2569373,nssv2569310,nssv2569371,nssv2569313,nssv2569344,nssv2569376,nssv2569348,nssv2569324,nssv2569304,nssv2569321,nssv2569352,nssv2569381,nssv2569362,nssv2569314,nssv2569368,nssv2569319,nssv2569349,nssv2569374,nssv2569327,nssv2569332,nssv2569345,nssv2569322,nssv2569366,nssv2569326,nssv2569335,nssv2569308,nssv2569358,nssv2569378,nssv2569339,nssv2569307,nssv2569340,nssv2569311,nssv2569343,nssv2569377,nssv2569330,nssv2569375,nssv2569353,nssv2569325,nssv2569331,nssv2569318,nssv2569360,nssv2569305,nssv2569341,nssv2569312,nssv2569334,nssv2569328,nssv2569365,nssv2569315,nssv2569357,nssv2569333,nssv2569337,nssv2569309,nssv2569347,nssv2569382,nssv2569369,nssv2569351,nssv2569367,nssv2569338,nssv2569329,nssv2569354,nssv2569364,nssv2569350,nssv2569303,nssv2569336,nssv2569342,nssv2569363 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945713 1 337700 352306 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756053,nssv1756418,nssv1756061,nssv1756424,nssv1756063,nssv1756404,nssv1756060,nssv1756415,nssv1756071,nssv1756402,nssv1756067,nssv1756087,nssv1756077,nssv1756425,nssv1756431,nssv1756409,nssv1756433,nssv1756090,nssv1756062,nssv1756049,nssv1756065,nssv1756083,nssv1756050,nssv1756088,nssv1756427,nssv1756410,nssv1756052,nssv1756075,nssv1756434,nssv1756420,nssv1756432,nssv1756426,nssv1756073,nssv1756072,nssv1756070,nssv1756412,nssv1756080,nssv1756079,nssv1756059,nssv1756413,nssv1756055,nssv1756091,nssv1756058,nssv1756423,nssv1756066,nssv1756084,nssv1756068,nssv1756074,nssv1756064,nssv1756406,nssv1756056,nssv1756422,nssv1756429,nssv1756403,nssv1756069,nssv1756401,nssv1756051,nssv1756082,nssv1756436,nssv1756416,nssv1756054,nssv1756417,nssv1756078,nssv1756421,nssv1756430,nssv1756076,nssv1756435,nssv1756414,nssv1756057,nssv1756411,nssv1756428,nssv1756407,nssv1756089,nssv1756419,nssv1756408,nssv1756086,nssv1756081,nssv1756092,nssv1756405,nssv1756085 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945521 1 340358 342662 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569386,nssv2569394,nssv2569393,nssv2569402,nssv2569391,nssv2569409,nssv2569390,nssv2569387,nssv2569404,nssv2569389,nssv2569413,nssv2569425,nssv2569421,nssv2569415,nssv2569422,nssv2569407,nssv2569388,nssv2569400,nssv2569414,nssv2569426,nssv2569420,nssv2569392,nssv2569410,nssv2569432,nssv2569396,nssv2569395,nssv2569416,nssv2569431,nssv2569427,nssv2569428,nssv2569406,nssv2569408,nssv2569429,nssv2569418,nssv2569384,nssv2569397,nssv2569423,nssv2569403,nssv2569399,nssv2569417,nssv2569424,nssv2569385,nssv2569398,nssv2569411,nssv2569430,nssv2569419,nssv2569405,nssv2569412,nssv2569401 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945524 1 342662 343162 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569445,nssv2569440,nssv2570528,nssv2569435,nssv2570529,nssv2569439,nssv2570551,nssv2570553,nssv2570561,nssv2570567,nssv2570554,nssv2569436,nssv2570530,nssv2570522,nssv2570563,nssv2569434,nssv2570558,nssv2570533,nssv2569441,nssv2570552,nssv2570550,nssv2569443,nssv2570526,nssv2570560,nssv2570555,nssv2570527,nssv2570523,nssv2570559,nssv2570566,nssv2570562,nssv2570557,nssv2570525,nssv2570535,nssv2570536,nssv2569438,nssv2570532,nssv2570564,nssv2570534,nssv2569442,nssv2570524,nssv2570531,nssv2570565,nssv2569433,nssv2570537,nssv2569444,nssv2569437,nssv2570538,nssv2570556 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945525 1 343162 352306 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570547,nssv2571473,nssv2570546,nssv2571469,nssv2570542,nssv2571467,nssv2571492,nssv2570543,nssv2571472,nssv2571464,nssv2571481,nssv2571500,nssv2570544,nssv2570549,nssv2571489,nssv2571478,nssv2571470,nssv2571491,nssv2571499,nssv2571486,nssv2571501,nssv2571485,nssv2571494,nssv2571479,nssv2571498,nssv2571474,nssv2571480,nssv2571497,nssv2570548,nssv2571490,nssv2570540,nssv2571495,nssv2571465,nssv2571496,nssv2571484,nssv2571471,nssv2571487,nssv2571477,nssv2570545,nssv2571493,nssv2570541,nssv2571475,nssv2571488,nssv2571483,nssv2571468,nssv2571476,nssv2571466,nssv2571482 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1150308 1 343299 364400 CNV duplication John_et_al_2014 26484159 Sequencing nssv4003607 M 1 1 0 "" KWB1 nsv10050 1 348092 641599 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv18118,nssv18107,nssv24620,nssv26902,nssv24618,nssv18121,nssv18115,nssv18094,nssv14769,nssv21443,nssv18112,nssv18105,nssv14767,nssv21426,nssv21441,nssv21435,nssv18102,nssv18101,nssv18116,nssv21439,nssv21450,nssv26886,nssv24614,nssv18120,nssv18111,nssv24595,nssv21447,nssv18099,nssv18119,nssv28054,nssv24604,nssv21446,nssv21433,nssv18106,nssv18095,nssv18092,nssv18110,nssv26896,nssv18100,nssv18104,nssv18098,nssv18114,nssv24606,nssv21449,nssv14778,nssv21424,nssv24612,nssv24597,nssv18096,nssv24594,nssv14765,nssv18109 M 31 8 30 MIR6723,OR4F16,OR4F29,OR4F3 NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv1142733 1 352100 355600 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994232 M 2 0 1 "" KWS1 nsv1074919 1 352299 363200 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3765719 M 1 0 1 "" KWP1 nsv945265 1 352306 371739 OTHER complex Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1679650,nssv1756446,nssv1677687,nssv1756463,nssv1677742,nssv1679594,nssv1677709,nssv1756442,nssv1677642,nssv1756473,nssv1686360,nssv1756477,nssv1683216,nssv1756482,nssv1679661,nssv1756449,nssv1684709,nssv1756454,nssv1677754,nssv1756483,nssv1679639,nssv1682067,nssv1679628,nssv1756453,nssv1679627,nssv1756467,nssv1679672,nssv1756476,nssv1756443,nssv1680921,nssv1677665,nssv1756451,nssv1677731,nssv1756478,nssv1682237,nssv1679775,nssv1677641,nssv1756468,nssv1677720,nssv1756447,nssv1677753,nssv1756484,nssv1684698,nssv1756440,nssv1679705,nssv1756455,nssv1679716,nssv1756481,nssv1677676,nssv1756437,nssv1756439,nssv1756464,nssv1677698,nssv1679492,nssv1679694,nssv1756457,nssv1679616,nssv1679073,nssv1756444,nssv1756458,nssv1677643,nssv1677927,nssv1677765,nssv1682178,nssv1679738,nssv1756445,nssv1679683,nssv1679761,nssv1677654,nssv1756469,nssv1756462,nssv1679727,nssv1677816,nssv1756460,nssv1756480,nssv1756470,nssv1756461,nssv1756471,nssv1681956,nssv1756474,nssv1756452,nssv1756448,nssv1679739,nssv1756450,nssv1756475,nssv1756459,nssv1756472,nssv1756479,nssv1756456,nssv1678962,nssv1756465,nssv1680810,nssv1756441,nssv1679605,nssv1679750,nssv1756438,nssv1756466 M 97 10 0 OR4F16,OR4F29,OR4F3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv5n100 1 356431 1049804 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002919,nsv1008043 M 29084 2 0 AGRN,C1orf159,C1orf170,FAM41C,FAM87B,HES4,ISG15,KLHL17,LINC00115,LINC01128,LOC100130417,LOC100133331,LOC100288069,MIR6723,NOC2L,OR4F16,OR4F29,OR4F3,PLEKHN1,RNF223,SAMD11 nsv1142734 1 361500 363300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994233 M 2 0 1 "" KWS1 nsv1126162 1 366400 384400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984389 M 2 0 1 OR4F16,OR4F29,OR4F3 KWS1 nsv514924 1 367049 368179 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2859918,nssv2861430,nssv2859521,nssv2866575,nssv2864797,nssv2862220,nssv2866662,nssv2862379,nssv2860015,nssv2862117,nssv2862685,nssv2862348,nssv2860775,nssv2867889,nssv2863469,nssv2860896,nssv2863429,nssv2865079,nssv2866517,nssv2862673,nssv2864835,nssv2866478,nssv2863551,nssv2862208,nssv2860354,nssv2867250,nssv2864967,nssv2864877,nssv2860603,nssv2859557,nssv2861053,nssv2867661,nssv2866175,nssv2862207,nssv2865606,nssv2867319,nssv2861234,nssv2858625,nssv2859402,nssv2859187,nssv2866044,nssv2864035,nssv2863225,nssv2865195,nssv2861656,nssv2863997,nssv2862828,nssv2862565,nssv2862784,nssv2863452,nssv2866540,nssv2866054,nssv2861519,nssv2861957,nssv2864276,nssv2866347,nssv2866340,nssv2866779,nssv2865221,nssv2862740,nssv2864960,nssv2860916,nssv2866864,nssv2867206,nssv2860830,nssv2860882,nssv2867570,nssv2866251,nssv2866973,nssv2862975,nssv2864160,nssv2866126,nssv2859293,nssv2862512,nssv2868325,nssv2862194,nssv2863347,nssv2863532,nssv2864149,nssv2858909,nssv2862541,nssv2862545,nssv2860284,nssv2861414,nssv2858809,nssv2858632,nssv2863412,nssv2866752,nssv2867595,nssv2862420,nssv2865175,nssv2868253,nssv2866686,nssv2861953,nssv2861967,nssv2861881,nssv2866632,nssv2859792,nssv2864941,nssv2862494,nssv2860276,nssv2866598,nssv2865338,nssv2862714,nssv2861837,nssv2862493,nssv2860512,nssv2862500,nssv2864782,nssv2867004,nssv2865996,nssv2865663,nssv2861345,nssv2867200,nssv2861639,nssv2859894,nssv2858843,nssv2866581,nssv2863561,nssv2860753,nssv2864719,nssv2858659,nssv2866835,nssv2867671,nssv2866637,nssv2862363,nssv2861926,nssv2862897,nssv2866883,nssv2867752,nssv2868182,nssv2864103,nssv2862554,nssv2863369,nssv2859497,nssv2865633,nssv2859989,nssv2866982,nssv2862417,nssv2864997,nssv2858904,nssv2863885,nssv2864925,nssv2868158,nssv2859039,nssv2858631,nssv2861737,nssv2865461,nssv2861858,nssv2858963,nssv2864216,nssv2866661,nssv2861150,nssv2866012,nssv2863835,nssv2863290,nssv2862783,nssv2866532,nssv2859498,nssv2866554,nssv2863163,nssv2858945,nssv2858724,nssv2864546,nssv2863508,nssv2863949,nssv2866547,nssv2863820,nssv2860049,nssv2864567,nssv2861599,nssv2858824,nssv2867757,nssv2864598,nssv2866132,nssv2863813,nssv2865436,nssv2866447,nssv2865553,nssv2864759,nssv2859078,nssv2862441,nssv2862367,nssv2862285,nssv2860769,nssv2865836,nssv2861593,nssv2860480,nssv2859248,nssv2859623,nssv2863100,nssv2867383,nssv2866346,nssv2864063,nssv2863049,nssv2858933,nssv2860934,nssv2861874,nssv2864857,nssv2867737,nssv2865057,nssv2866878,nssv2864695,nssv2862815,nssv2862754,nssv2860416,nssv2859697,nssv2863806,nssv2860621,nssv2860534,nssv2866048,nssv2860240,nssv2865846,nssv2859345,nssv2862927,nssv2859398,nssv2866764,nssv2859879,nssv2859254,nssv2863812,nssv2858723,nssv2859890,nssv2861928,nssv2866984,nssv2864408,nssv2865207,nssv2862258,nssv2867382,nssv2860674,nssv2858950,nssv2864758,nssv2866121,nssv2867543,nssv2859837,nssv2859933,nssv2864577,nssv2865946,nssv2864217,nssv2867890,nssv2866422,nssv2864578,nssv2868254,nssv2863983,nssv2859280,nssv2867689,nssv2867598,nssv2862284,nssv2866971,nssv2860382,nssv2865435,nssv2865659,nssv2865550,nssv2867930,nssv2862123,nssv2861241,nssv2860657,nssv2862921,nssv2867390,nssv2858495,nssv2863335,nssv2868309,nssv2867490,nssv2866061,nssv2864736,nssv2862593,nssv2864353,nssv2863943,nssv2862400,nssv2861157,nssv2860353,nssv2862168,nssv2864615,nssv2863615,nssv2865821,nssv2863516,nssv2859034,nssv2860428,nssv2860438,nssv2861826,nssv2867293,nssv2861853,nssv2862808,nssv2867303,nssv2864259,nssv2862765,nssv2861784,nssv2867947,nssv2863346,nssv2859457,nssv2865956,nssv2859691,nssv2866687,nssv2868231,nssv2865173,nssv2862600,nssv2861542,nssv2863901,nssv2867834,nssv2868361,nssv2866831,nssv2866565,nssv2860372,nssv2864671,nssv2866555,nssv2866853,nssv2864777,nssv2858797,nssv2866409,nssv2865554,nssv2859860,nssv2860871,nssv2859526,nssv2861413,nssv2865583,nssv2866668,nssv2863759,nssv2859361,nssv2864195,nssv2867933,nssv2866209,nssv2861045,nssv2859091,nssv2862976,nssv2867072,nssv2867103,nssv2859791,nssv2867973,nssv2866972,nssv2865277,nssv2863224,nssv2867218,nssv2864823,nssv2861167,nssv2862029,nssv2861002,nssv2860554,nssv2863821,nssv2864233,nssv2861518,nssv2862147,nssv2862326,nssv2864316,nssv2861299,nssv2862141,nssv2866556,nssv2864388,nssv2862009,nssv2862460,nssv2867249,nssv2859368,nssv2868474,nssv2858699,nssv2865437,nssv2866840,nssv2864990,nssv2863170,nssv2859077,nssv2864604,nssv2867682,nssv2863731,nssv2860592,nssv2860469,nssv2864173,nssv2862988,nssv2860771,nssv2866856,nssv2866797,nssv2864389,nssv2862841,nssv2866708,nssv2864045,nssv2867749,nssv2858819,nssv2859275,nssv2864044,nssv2864440,nssv2867774,nssv2864064,nssv2858554,nssv2865414,nssv2862030,nssv2863203,nssv2868031,nssv2858519,nssv2864909,nssv2859221,nssv2866751,nssv2866548,nssv2861022,nssv2866264,nssv2868243,nssv2864018,nssv2865093,nssv2862180,nssv2865808,nssv2862660,nssv2866683,nssv2864976,nssv2865396,nssv2866203,nssv2860982,nssv2866265,nssv2860915,nssv2861562,nssv2862722,nssv2861583,nssv2868339,nssv2862091,nssv2866798,nssv2862469,nssv2868103,nssv2861018,nssv2866104,nssv2866094,nssv2860388,nssv2861438,nssv2866195,nssv2860808,nssv2864280,nssv2859548,nssv2866867,nssv2861803,nssv2862985,nssv2867047,nssv2868492,nssv2862596,nssv2865136,nssv2860415,nssv2859401,nssv2863496,nssv2863590,nssv2865056,nssv2858648,nssv2867457,nssv2866977,nssv2866039,nssv2860347,nssv2866240,nssv2863873,nssv2866652,nssv2863998,nssv2864957,nssv2864260,nssv2862059,nssv2864885,nssv2860550,nssv2864368,nssv2867027,nssv2864528,nssv2864032,nssv2864400,nssv2862759,nssv2859917,nssv2864057,nssv2861377,nssv2866645,nssv2862008,nssv2862024,nssv2865200,nssv2862431,nssv2867451,nssv2860091,nssv2866970,nssv2864179,nssv2868006,nssv2864966,nssv2864268,nssv2859106,nssv2863502,nssv2862035,nssv2861893,nssv2860628,nssv2860829,nssv2859168,nssv2859326,nssv2867020,nssv2864374,nssv2864905,nssv2865025,nssv2862953,nssv2861944,nssv2862314,nssv2863474,nssv2859993,nssv2863643,nssv2867487,nssv2865032,nssv2864914 M 2366 488 0 OR4F16,OR4F29,OR4F3 NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv945715 1 371739 435382 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756514,nssv1756517,nssv1756502,nssv1756535,nssv1756491,nssv1756523,nssv1755723,nssv1756511,nssv1756494,nssv1756508,nssv1756507,nssv1756538,nssv1756503,nssv1756532,nssv1756500,nssv1756521,nssv1756513,nssv1756522,nssv1756488,nssv1756543,nssv1756486,nssv1756520,nssv1755727,nssv1756519,nssv1756493,nssv1756552,nssv1755729,nssv1756536,nssv1756497,nssv1756533,nssv1756498,nssv1756547,nssv1755724,nssv1756539,nssv1756489,nssv1756553,nssv1756496,nssv1756537,nssv1756499,nssv1756485,nssv1756509,nssv1756548,nssv1756506,nssv1756551,nssv1756487,nssv1756524,nssv1755730,nssv1756546,nssv1755726,nssv1756527,nssv1756504,nssv1756549,nssv1755731,nssv1756525,nssv1755725,nssv1756544,nssv1756492,nssv1756515,nssv1756501,nssv1756510,nssv1755728,nssv1756541,nssv1756490,nssv1756550,nssv1756495,nssv1756512,nssv1755722,nssv1756545,nssv1756505,nssv1756531,nssv1756516,nssv1756526,nssv1756530,nssv1756540,nssv1755721,nssv1756542,nssv1756534,nssv1756529,nssv1756518,nssv1756528 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv544874 1 379005 454648 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707624 M 17421 0 1 "" nsv1074921 1 385199 385900 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3765726 M 1 0 1 "" KWP1 esv3438382 1 385789 386687 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692318 M 185 1 0 "" NA19239 nsv945527 1 397881 409465 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571513,nssv2571528,nssv2571511,nssv2571547,nssv2571510,nssv2571523,nssv2571506,nssv2571548,nssv2571517,nssv2571551,nssv2571531,nssv2571522,nssv2571542,nssv2571550,nssv2571544,nssv2571534,nssv2571545,nssv2571516,nssv2571546,nssv2571518,nssv2571509,nssv2571539,nssv2571533,nssv2571532,nssv2571530,nssv2571525,nssv2571536,nssv2571540,nssv2571520,nssv2571504,nssv2571524,nssv2571541,nssv2571543,nssv2571537,nssv2571507,nssv2571538,nssv2571519,nssv2571529,nssv2571515,nssv2571527,nssv2571549,nssv2571514,nssv2571508,nssv2571505,nssv2571526,nssv2571535,nssv2571521,nssv2571512 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1143422 1 397900 432000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980619 M 2 0 1 "" KWS1 nsv945528 1 409465 413535 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571555,nssv2571578,nssv2571559,nssv2571552,nssv2571560,nssv2571569,nssv2571562,nssv2571564,nssv2571553,nssv2571587,nssv2571586,nssv2571591,nssv2571598,nssv2571576,nssv2571597,nssv2571566,nssv2571599,nssv2571558,nssv2571579,nssv2571580,nssv2571594,nssv2571583,nssv2571556,nssv2571585,nssv2571571,nssv2571573,nssv2571563,nssv2571574,nssv2571593,nssv2571572,nssv2571595,nssv2571592,nssv2571561,nssv2571575,nssv2571589,nssv2571565,nssv2571584,nssv2571568,nssv2571577,nssv2571590,nssv2571582,nssv2571557,nssv2571600,nssv2571588,nssv2571570,nssv2571581,nssv2571596,nssv2571567,nssv2571554 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3359178 1 409989 413887 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692323 M 185 1 0 "" NA12878 nsv945529 1 413535 415914 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571611,nssv2571636,nssv2571609,nssv2571618,nssv2571608,nssv2571622,nssv2571604,nssv2571607,nssv2571613,nssv2571634,nssv2571639,nssv2571647,nssv2571633,nssv2571632,nssv2571646,nssv2571640,nssv2571610,nssv2571648,nssv2571614,nssv2571619,nssv2571615,nssv2571601,nssv2571635,nssv2571628,nssv2571616,nssv2571637,nssv2571644,nssv2571617,nssv2571605,nssv2571626,nssv2571621,nssv2571612,nssv2571629,nssv2571643,nssv2571645,nssv2571625,nssv2571638,nssv2571627,nssv2571641,nssv2571623,nssv2571620,nssv2571631,nssv2571630,nssv2571606,nssv2571642,nssv2571624,nssv2571602,nssv2571649,nssv2571603 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945530 1 415914 420388 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571659,nssv2571651,nssv2571656,nssv2571655,nssv2571657,nssv2571653,nssv2571652,nssv2571658,nssv2571650,nssv2571660,nssv2571654 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945532 1 420388 422832 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571671,nssv2571665,nssv2571668,nssv2571667,nssv2571664,nssv2571662,nssv2571669,nssv2571670,nssv2571672,nssv2571666,nssv2571663 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945533 1 422832 424285 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571683,nssv2571675,nssv2571676,nssv2571674,nssv2571680,nssv2571677,nssv2571681,nssv2571682,nssv2571679,nssv2571673,nssv2571684,nssv2571678 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945535 1 424285 426050 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571694,nssv2571685,nssv2571691,nssv2571689,nssv2571692,nssv2571690,nssv2571687,nssv2571688,nssv2571693,nssv2571696,nssv2571695,nssv2571686 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3444251 1 425089 427687 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692326 M 185 1 0 "" NA12878 esv3416681 1 425089 429487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692327 M 185 1 0 "" NA19238 nsv945536 1 426050 427054 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571706,nssv2571701,nssv2571703,nssv2571698,nssv2571704,nssv2571700,nssv2571699,nssv2571708,nssv2571697,nssv2571705,nssv2571702,nssv2571707 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945537 1 427054 435382 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571718,nssv2571710,nssv2571711,nssv2571712,nssv2571715,nssv2571720,nssv2571716,nssv2571714,nssv2571713,nssv2571709,nssv2571719,nssv2571717 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3347881 1 430989 432487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692334 M 185 1 0 "" NA12878 nsv1126163 1 432200 449400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984390 M 2 0 1 "" KWS1 nsv945539 1 435382 438688 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571730,nssv2571725,nssv2571723,nssv2571721,nssv2571727,nssv2571726,nssv2571728,nssv2571729,nssv2571724,nssv2571722,nssv2571731 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv994970 1 436729 461014 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586250 M 3 0 1 "" HuRef nsv945716 1 438688 459944 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755738,nssv1755742,nssv1755734,nssv1755733,nssv1755741,nssv1755735,nssv1755739,nssv1755736,nssv1755732,nssv1755737,nssv1755740 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3391927 1 450889 452387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692342 M 185 1 0 "" NA19238 esv3426596 1 450889 453587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692343 M 185 1 0 "" NA19240 esv3334942 1 450989 457087 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692344 M 185 1 0 "" NA19239 esv3410685 1 456289 459687 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692345 M 185 1 0 "" NA12878 nsv1143423 1 459500 460800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980620 M 2 0 1 "" KWS1 nsv945717 1 459944 463640 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755749,nssv1748171,nssv1755745,nssv1755782,nssv1755752,nssv1755769,nssv1755750,nssv1755768,nssv1755778,nssv1755747,nssv1755772,nssv1748175,nssv1755783,nssv1755760,nssv1755770,nssv1755755,nssv1755744,nssv1755753,nssv1755779,nssv1755759,nssv1755775,nssv1748170,nssv1755761,nssv1748172,nssv1748173,nssv1755777,nssv1755766,nssv1755763,nssv1755743,nssv1755746,nssv1755771,nssv1755774,nssv1755764,nssv1755762,nssv1755773,nssv1755756,nssv1755757,nssv1748174,nssv1755781,nssv1755767,nssv1755748,nssv1755780,nssv1755776,nssv1755754,nssv1755758,nssv1755784,nssv1755765,nssv1755751 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv8e59 1 460689 471287 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3445983,esv3381255 M 185 2 0 "" NA12878,NA12892 esv3419296 1 460789 461787 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692347 M 185 1 0 "" NA19238 esv1004360 1 461061 471368 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586709 M 3 1 0 "" HuRef nsv953222 1 463001 471100 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003132 M 1 1 0 "" BILGI_BIOE nsv945718 1 463640 471368 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1748254,nssv1748216,nssv1748200,nssv2571734,nssv1748255,nssv1748241,nssv1748253,nssv1748229,nssv1748191,nssv1748222,nssv2571742,nssv1748217,nssv1748189,nssv1748235,nssv1748178,nssv1749498,nssv1749488,nssv1748237,nssv1748190,nssv1748249,nssv1748195,nssv1748218,nssv1748181,nssv1749501,nssv1748192,nssv1748219,nssv2571735,nssv1748238,nssv1749489,nssv1748248,nssv1748207,nssv1748231,nssv1748205,nssv1748236,nssv2571739,nssv1748239,nssv1749494,nssv1748203,nssv2571740,nssv1748214,nssv1748194,nssv2571733,nssv1748177,nssv1749496,nssv1748184,nssv1748212,nssv1748188,nssv2571743,nssv1748187,nssv1748251,nssv1748193,nssv1748213,nssv1748185,nssv1748221,nssv1749491,nssv1748245,nssv1748197,nssv1748228,nssv1749493,nssv1748208,nssv1748183,nssv1748230,nssv1749492,nssv1748223,nssv1748182,nssv1748240,nssv1748179,nssv1749502,nssv1748180,nssv1749499,nssv1748196,nssv1749504,nssv1748204,nssv2571738,nssv1748198,nssv2571736,nssv1749490,nssv1748227,nssv1748186,nssv1748215,nssv1748250,nssv1749500,nssv1749497,nssv1748176,nssv1749495,nssv1748232,nssv2571737,nssv1748242,nssv1748220,nssv1748224,nssv1749503,nssv2571741,nssv1748233,nssv1748234,nssv1748243,nssv1748199,nssv1748209,nssv1748201,nssv1748246,nssv1748225,nssv1748211,nssv1748247,nssv1748252,nssv1748206,nssv1748244,nssv1748210,nssv1748226,nssv1748202 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1076309 1 467399 471300 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3762533 M 1 1 0 "" KWP1 nsv1152873 1 469099 471300 CNV duplication John_et_al_2014 26484159 Sequencing nssv3997907 M 1 1 0 "" KWB1 dgv2n82 1 521369 523750 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv945540,nsv945719 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv21732 1 521413 724071 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10580,esv20880,esv17670,esv12770,esv12525,esv19173,esv17284,esv18879,esv17045,esv19351,esv18811,esv17998,esv17928,esv16417 M 40 23 16 LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 NA06985,NA07037,NA07045,NA11894,NA11993,NA12006,NA12044,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18505,NA18511,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19190,NA19225,NA19240 esv992503 1 521458 547879 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586722 M 3 0 1 "" HuRef nsv471522 1 522139 756783 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547898,nssv547899,nssv547897 M 3 3 0 FAM87B,LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 JDW,NA18507,YH nsv945721 1 523750 529811 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571766,nssv2571767,nssv2571763,nssv2571761,nssv2571764,nssv2571762,nssv2571759,nssv2571758,nssv2571757,nssv2571765,nssv2571756,nssv2571760 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945720 1 523750 546384 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749555,nssv1749553,nssv1749562,nssv1749563,nssv1749560,nssv1749554,nssv1749559,nssv1749561,nssv1749558,nssv1749557,nssv1749556 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3444717 1 529489 534787 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692356 M 185 1 0 "" NA19238 esv3324015 1 531489 532387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692357 M 185 1 0 "" NA12878 dgv9e59 1 533089 534187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3442814,esv3367382 M 185 2 0 "" NA19239,NA19240 nsv830758 1 539255 656750 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441851,nssv1442073,nssv1442295,nssv1442517,nssv1441740,nssv1442406,nssv1442184,nssv1441962 M 95 0 8 MIR6723,OR4F16,OR4F29,OR4F3 esv3350472 1 544489 546187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692365 M 185 1 0 "" NA12878 nsv544875 1 544966 569604 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707625 M 17421 1 0 MIR6723 nsv1118085 1 546200 564500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980303 M 2 0 1 "" KWS1 nsv945723 1 546384 549347 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573010,nssv2571770,nssv2573007,nssv2573009,nssv2573008,nssv2573005,nssv2571771,nssv2571769,nssv2573006,nssv2573004,nssv2573011 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945722 1 546384 563896 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749642,nssv1749587,nssv1749566,nssv1749624,nssv1749568,nssv1749589,nssv1749574,nssv1749611,nssv1749585,nssv1749602,nssv1749588,nssv1749619,nssv1749637,nssv1749598,nssv1749575,nssv1749601,nssv1749595,nssv1749618,nssv1749579,nssv1749564,nssv1749569,nssv1749627,nssv1749638,nssv1749622,nssv1749583,nssv1749629,nssv1749634,nssv1749631,nssv1749584,nssv1749621,nssv1749565,nssv1749615,nssv1749580,nssv1749632,nssv1749578,nssv1749620,nssv1749576,nssv1749610,nssv1749639,nssv1749630,nssv1749643,nssv1749614,nssv1749577,nssv1749604,nssv1749640,nssv1749605,nssv1749636,nssv1749594,nssv1749635,nssv1749623,nssv1749571,nssv1749625,nssv1749572,nssv1749600,nssv1749593,nssv1749590,nssv1749592,nssv1749603,nssv1749573,nssv1749596,nssv1749582,nssv1749626,nssv1749570,nssv1749628,nssv1749586,nssv1749616,nssv1749581,nssv1749612,nssv1749641,nssv1749608,nssv1749567,nssv1749607,nssv1749599,nssv1749609,nssv1749597,nssv1749606,nssv1749591,nssv1749613,nssv1749633,nssv1749617 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv10e59 1 546689 547987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3377615,esv3393054 M 185 2 0 "" NA12878,NA12891 nsv945542 1 549347 557532 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573022,nssv2573014,nssv2573019,nssv2573021,nssv2573020,nssv2573013,nssv2573015,nssv2573016,nssv2573023,nssv2573018,nssv2573012,nssv2573017 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv11e59 1 554089 558787 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3399854,esv3433794 M 185 2 0 "" NA12878,NA19238 nsv945543 1 557532 563896 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573032,nssv2573035,nssv2573031,nssv2573034,nssv2573027,nssv2573033,nssv2573029,nssv2573028,nssv2573026,nssv2573030,nssv2573024,nssv2573025 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945724 1 563896 570056 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749655,nssv1749714,nssv1749723,nssv1749720,nssv1749656,nssv1749690,nssv1749672,nssv1749715,nssv1749645,nssv1749693,nssv1749668,nssv1749708,nssv1749721,nssv1749677,nssv1749724,nssv1749697,nssv1749647,nssv1749689,nssv1749654,nssv1749669,nssv1749728,nssv1749670,nssv1749666,nssv1749719,nssv1749651,nssv1749739,nssv1749648,nssv1749735,nssv1749646,nssv1749686,nssv1749725,nssv1749678,nssv1749659,nssv1749692,nssv1749649,nssv1749674,nssv1749650,nssv1749705,nssv1749663,nssv1749716,nssv1749664,nssv1749681,nssv1749660,nssv1749644,nssv1749675,nssv1749737,nssv1749726,nssv1749709,nssv1749730,nssv1749682,nssv1749665,nssv1749702,nssv1749673,nssv1749713,nssv1749658,nssv1749691,nssv1749727,nssv1749733,nssv1749652,nssv1749688,nssv1749729,nssv1749684,nssv1749661,nssv1749710,nssv1749653,nssv1749701,nssv1749662,nssv1749695,nssv1749657,nssv1749738,nssv1749722,nssv1749717,nssv1749699,nssv1749734,nssv1749707,nssv1749680,nssv1749694,nssv1749700,nssv1749676,nssv1749732,nssv1749685,nssv1749667,nssv1749740,nssv1749706,nssv1749698,nssv1749712,nssv1749704,nssv1749683,nssv1749703,nssv1749679,nssv1749731,nssv1749696,nssv1749718,nssv1749687,nssv1749736,nssv1749671,nssv1749711 M 97 10 0 MIR6723 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv949752 1 564301 570300 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997093 M 1 1 0 MIR6723 BILGI_BIOE esv3417080 1 564389 570387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692377 M 185 1 0 MIR6723 NA19239 dgv1e24 1 564434 649747 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH esv2750552,esv2750735,esv2750642,esv2750643,esv2750751,esv2750702,esv2750566,esv2750488,esv2750655,esv2750730,esv2750723,esv2750553,esv2750575 M 51 0 13 MIR6723,OR4F16,OR4F29,OR4F3 21634,21837,21847,21863,21872,21911,21938,21972,22007,22170,22231,22278,22371 dgv2n14 1 564477 706368 CNV gain Cooper_et_al_2008 18776910 SNP array nsv433346,nsv433347 M 9 2 0 LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 NA12156,NA19240 nsv1077276 1 564499 571000 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3762135 M 1 1 0 MIR6723 KWP1 nsv820617 1 564540 570775 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1419880 M 1 1 0 MIR6723 NA10851 nsv945544 1 564556 566088 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573041,nssv2573045,nssv2573037,nssv2573044,nssv2573042,nssv2573039,nssv2573043,nssv2573036,nssv2573038,nssv2573040 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1004962 1 564621 850675 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696751 M 29084 1 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 nsv1003571 1 564773 798959 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466368 M 29084 0 1 FAM87B,LINC00115,LINC01128,LOC100133331,LOC100288069,MIR6723,OR4F16,OR4F29,OR4F3 nsv544876 1 564862 568463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707626 M 17421 0 1 MIR6723 dgv3n54 1 565490 570178 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544878,nsv544877 M 17421 0 2 MIR6723 nsv945546 1 568154 569456 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573047,nssv2573046,nssv2573051,nssv2573055,nssv2573052,nssv2573053,nssv2573054,nssv2573049,nssv2573050,nssv2573048 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945727 1 570056 574939 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573062,nssv2573059,nssv2573063,nssv2573064,nssv2573058,nssv2573060,nssv2573065,nssv2573057,nssv2573066,nssv2573061,nssv2573056 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945726 1 570056 617910 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749753,nssv1750734,nssv1749769,nssv1749780,nssv1750742,nssv1750729,nssv1749770,nssv1749773,nssv1749754,nssv1750724,nssv1750740,nssv1749786,nssv1749765,nssv1749768,nssv1750736,nssv1750733,nssv1750741,nssv1749790,nssv1750738,nssv1749794,nssv1749745,nssv1749779,nssv1749746,nssv1749776,nssv1749752,nssv1749782,nssv1749762,nssv1749774,nssv1749756,nssv1749783,nssv1749750,nssv1750725,nssv1749760,nssv1749767,nssv1749744,nssv1749778,nssv1749761,nssv1750730,nssv1750737,nssv1749766,nssv1750735,nssv1749789,nssv1749757,nssv1749788,nssv1749755,nssv1750726,nssv1750739,nssv1750731,nssv1749772,nssv1749792,nssv1749759,nssv1749775,nssv1749749,nssv1749741,nssv1750744,nssv1750728,nssv1749751,nssv1749771,nssv1749742,nssv1750723,nssv1749748,nssv1749787,nssv1749758,nssv1749785,nssv1749747,nssv1750727,nssv1749763,nssv1749795,nssv1750743,nssv1749764,nssv1749743,nssv1749781,nssv1749791,nssv1750721,nssv1749784,nssv1750720,nssv1750722,nssv1749777,nssv1750732,nssv1749793 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3362065 1 571189 579987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692378 M 185 1 0 "" NA12878 nsv945547 1 574939 580365 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573074,nssv2573086,nssv2573075,nssv2573098,nssv2573070,nssv2573101,nssv2573092,nssv2573087,nssv2573108,nssv2573084,nssv2573110,nssv2573102,nssv2573104,nssv2573115,nssv2573095,nssv2573093,nssv2573077,nssv2573073,nssv2573094,nssv2573069,nssv2573091,nssv2573106,nssv2573096,nssv2573111,nssv2573081,nssv2573090,nssv2573097,nssv2573113,nssv2573109,nssv2573112,nssv2573105,nssv2573071,nssv2573107,nssv2573089,nssv2573072,nssv2573088,nssv2573076,nssv2573079,nssv2573085,nssv2573100,nssv2573103,nssv2573114,nssv2573078,nssv2573080,nssv2573082,nssv2573083,nssv2573099,nssv2573068 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3393199 1 576789 578987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692385 M 185 1 0 "" NA19240 nsv831869 1 579492 743311 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442740,nssv1442629,nssv1443073,nssv1443184,nssv1443295,nssv1443406,nssv1442962,nssv1442851,nssv1443517,nssv1443628 M 95 8 2 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nsv945549 1 580365 582158 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573123,nssv2573154,nssv2573124,nssv2573152,nssv2573119,nssv2573137,nssv2573135,nssv2573134,nssv2573142,nssv2573159,nssv2573157,nssv2573161,nssv2573117,nssv2573149,nssv2573132,nssv2573143,nssv2573155,nssv2573126,nssv2573133,nssv2573158,nssv2573151,nssv2573125,nssv2573156,nssv2573127,nssv2573145,nssv2573153,nssv2573118,nssv2573141,nssv2573129,nssv2573160,nssv2573130,nssv2573138,nssv2573147,nssv2573139,nssv2573150,nssv2573120,nssv2573148,nssv2573128,nssv2573121,nssv2573140,nssv2573162,nssv2573131,nssv2573144,nssv2573136,nssv2573146,nssv2573163,nssv2573122,nssv2573164 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3363248 1 592089 592987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692393 M 185 1 0 "" NA19238 nsv1077277 1 599099 602300 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3768301 M 1 1 0 "" KWP1 nsv1126164 1 600100 601700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984391 M 2 0 1 "" KWS1 nsv1149470 1 602999 605900 CNV duplication John_et_al_2014 26484159 Sequencing nssv4000773 M 1 1 0 "" KWB1 dgv12e59 1 603689 605287 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3383793,esv3428101 M 185 2 0 "" NA19239,NA19240 nsv1143424 1 605400 623300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980621 M 2 0 1 OR4F16,OR4F29,OR4F3 KWS1 nsv1136052 1 605500 615800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989658 M 2 0 1 "" KWS2 nsv945736 1 617910 637404 OTHER complex Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1684710,nssv1684702,nssv1683206,nssv1750753,nssv1750751,nssv1750765,nssv1683217,nssv1685641,nssv1683213,nssv1750773,nssv1750752,nssv1750780,nssv1683211,nssv1750760,nssv1682260,nssv1750768,nssv1683218,nssv1750756,nssv1684714,nssv1751179,nssv1684422,nssv1750750,nssv1683214,nssv1750775,nssv1684722,nssv1686462,nssv1683219,nssv1750766,nssv1683212,nssv1750778,nssv1683221,nssv1684701,nssv1683195,nssv1750755,nssv1684523,nssv1686496,nssv1684708,nssv1750771,nssv1684715,nssv1684704,nssv1683215,nssv1750774,nssv1750747,nssv1751184,nssv1684713,nssv1750782,nssv1684712,nssv1684705,nssv1682238,nssv1751178,nssv1684707,nssv1686494,nssv1683220,nssv1751176,nssv1682226,nssv1686493,nssv1685439,nssv1750759,nssv1683296,nssv1751180,nssv1684624,nssv1750769,nssv1684711,nssv1750749,nssv1684699,nssv1750767,nssv1683397,nssv1751185,nssv1750754,nssv1751181,nssv1682249,nssv1750762,nssv1750764,nssv1751183,nssv1750779,nssv1686498,nssv1750758,nssv1750776,nssv1686495,nssv1750772,nssv1750757,nssv1684703,nssv1685540,nssv1750761,nssv1750748,nssv1751182,nssv1751177,nssv1750746,nssv1684700,nssv1686361,nssv1750770,nssv1750777,nssv1684706,nssv1750781,nssv1750763,nssv1686497,nssv1750745 M 97 10 0 OR4F16,OR4F29,OR4F3 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1159749 1 625470 768793 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nssv4025989 M 369 1 0 FAM87B,LINC00115,LINC01128,LOC100133331,LOC100288069 dgv1n111 1 625470 874902 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nsv1161363,nsv1161123 M 369 4 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100130417,LOC100133331,LOC100288069,SAMD11 nsv544879 1 629742 697930 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707629 M 17421 0 1 LOC100133331 nsv1136053 1 633400 637100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989659 M 2 0 1 "" KWS2 nsv945730 1 637404 641365 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573175,nssv2573184,nssv2573168,nssv2573177,nssv2573172,nssv2573190,nssv2573173,nssv2573186,nssv2573171,nssv2573166,nssv2573209,nssv2573207,nssv2573193,nssv2573170,nssv2573194,nssv2573201,nssv2573199,nssv2573181,nssv2573179,nssv2573182,nssv2573169,nssv2573195,nssv2573210,nssv2573212,nssv2573198,nssv2573189,nssv2573185,nssv2573174,nssv2573167,nssv2573208,nssv2573205,nssv2573213,nssv2573197,nssv2573206,nssv2573192,nssv2573211,nssv2573187,nssv2573180,nssv2573204,nssv2573203,nssv2573202,nssv2573183,nssv2573196,nssv2573178,nssv2573200,nssv2573188,nssv2573176,nssv2573191 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945729 1 637404 662433 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751196,nssv1751244,nssv1751189,nssv1751235,nssv1751207,nssv1751252,nssv1751201,nssv1751247,nssv1751217,nssv1751224,nssv1751214,nssv1751248,nssv1751198,nssv1751239,nssv1751263,nssv1751230,nssv1751188,nssv1751226,nssv1751257,nssv1751213,nssv1751199,nssv1751249,nssv1751259,nssv1751233,nssv1751208,nssv1751218,nssv1751187,nssv1751216,nssv1751262,nssv1751228,nssv1751261,nssv1751254,nssv1751200,nssv1751223,nssv1751191,nssv1751221,nssv1751210,nssv1751225,nssv1751197,nssv1751243,nssv1751260,nssv1751253,nssv1751215,nssv1751209,nssv1751193,nssv1751241,nssv1751256,nssv1751231,nssv1751202,nssv1751246,nssv1751190,nssv1751250,nssv1751194,nssv1751212,nssv1751265,nssv1751238,nssv1751192,nssv1751255,nssv1751195,nssv1751222,nssv1751204,nssv1751236,nssv1751258,nssv1751237,nssv1751203,nssv1751240,nssv1751264,nssv1751232,nssv1751206,nssv1751219,nssv1751205,nssv1751211,nssv1751251,nssv1751220,nssv1751242,nssv1751186,nssv1751227,nssv1751245,nssv1751229,nssv1751234 M 97 10 0 LOC100133331 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv6n106 1 640000 647400 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1110125,nsv1115328 M 2 2 0 "" KWS1,KWS2 nsv1146307 1 640799 686200 CNV duplication John_et_al_2014 26484159 Sequencing nssv3999509 M 1 1 0 LOC100133331 KWB1 nsv945551 1 641365 646620 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573222,nssv2573249,nssv2573217,nssv2573253,nssv2573221,nssv2573261,nssv2573245,nssv2573236,nssv2573220,nssv2573229,nssv2573257,nssv2573255,nssv2573225,nssv2573219,nssv2573234,nssv2573232,nssv2571023,nssv2573237,nssv2573238,nssv2573256,nssv2573218,nssv2573241,nssv2573259,nssv2573224,nssv2573260,nssv2573250,nssv2573235,nssv2573242,nssv2573248,nssv2573240,nssv2573239,nssv2573252,nssv2573226,nssv2573230,nssv2573243,nssv2573228,nssv2573246,nssv2573247,nssv2573215,nssv2573233,nssv2573251,nssv2573258,nssv2573244,nssv2573231,nssv2573223,nssv2573216,nssv2573227,nssv2573254 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945552 1 646620 647120 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571035,nssv2571050,nssv2571027,nssv2571072,nssv2571033,nssv2571056,nssv2571031,nssv2571024,nssv2571070,nssv2571037,nssv2571057,nssv2571051,nssv2571048,nssv2571068,nssv2571062,nssv2571055,nssv2571038,nssv2571044,nssv2571041,nssv2571071,nssv2571046,nssv2571060,nssv2571067,nssv2571026,nssv2571045,nssv2571025,nssv2571036,nssv2571042,nssv2571066,nssv2571047,nssv2571034,nssv2571030,nssv2571063,nssv2571064,nssv2571069,nssv2571049,nssv2571039,nssv2571077,nssv2571073,nssv2571040,nssv2571075,nssv2571028,nssv2571029,nssv2571052,nssv2571058,nssv2571059,nssv2571074,nssv2571053,nssv2571061 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1128581 1 657800 686600 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960492 M 2 1 0 LOC100133331 KWS1 nsv1124555 1 658000 668100 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976609 M 2 1 0 LOC100133331 KWS2 nsv945732 1 662433 730328 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751961,nssv1751325,nssv1751278,nssv1751974,nssv1751275,nssv1751302,nssv1751268,nssv1751307,nssv1751966,nssv1751312,nssv1751294,nssv1751291,nssv1751287,nssv1751266,nssv1751272,nssv1751289,nssv1751297,nssv1751314,nssv1751959,nssv1751958,nssv1751277,nssv1751300,nssv1751267,nssv1751953,nssv1751967,nssv1751955,nssv1751288,nssv1751304,nssv1751279,nssv1751320,nssv1751282,nssv1751322,nssv1751962,nssv1751327,nssv1751290,nssv1751978,nssv1751276,nssv1751332,nssv1751295,nssv1751975,nssv1751280,nssv1751315,nssv1751271,nssv1751309,nssv1751965,nssv1751956,nssv1751273,nssv1751954,nssv1751281,nssv1751310,nssv1751963,nssv1751977,nssv1751270,nssv1751305,nssv1751274,nssv1751296,nssv1751964,nssv1751328,nssv1751284,nssv1751308,nssv1751968,nssv1751299,nssv1751283,nssv1751957,nssv1751960,nssv1751319,nssv1751286,nssv1751292,nssv1751269,nssv1751293,nssv1751285,nssv1751298,nssv1751329,nssv1751324,nssv1751306,nssv1751303,nssv1751313,nssv1751301,nssv1751333,nssv1751323,nssv1751970,nssv1751334,nssv1751318,nssv1751311,nssv1751321,nssv1751330,nssv1751976,nssv1751952,nssv1751971,nssv1751335,nssv1751326,nssv1751331,nssv1751316,nssv1751972,nssv1751969,nssv1751973,nssv1751317 M 97 10 0 LOC100133331,LOC100288069 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1077278 1 664299 675100 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3770194 M 1 1 0 LOC100133331 KWP1 nsv949792 1 664301 675400 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997104 M 1 1 0 LOC100133331 BILGI_BIOE esv3584976 1 668630 850204 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839023,essv9838989,essv9839022,essv9838979,essv9838988,essv9838978,essv9838977,essv9838982,essv9838987,essv9838981,essv9838980,essv9838983,essv9838986,essv9838985,essv9838984,essv9838995,essv9839004,essv9839021,essv9838994,essv9838991,essv9838990,essv9838993,essv9838992,essv9838998,essv9839003,essv9838997,essv9838996,essv9838999,essv9839002,essv9839001,essv9839000,essv9839011,essv9839006,essv9839020,essv9839005,essv9839010,essv9839007,essv9839009,essv9839008,essv9839014,essv9839019,essv9839013,essv9839012,essv9839018,essv9839015,essv9839017,essv9839016,essv9839027,essv9839026,essv9839025,essv9839024,essv9839036,essv9839035,essv9839030,essv9839029,essv9839028,essv9839031,essv9839034,essv9839033,essv9839032 M 2504 60 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100288069 HG00306,HG00446,HG00457,HG00463,HG00475,HG00513,HG00543,HG00557,HG00593,HG00614,HG00620,HG00663,HG00675,HG00690,HG00692,HG00766,HG00867,HG00879,HG01028,HG01798,HG01840,HG01857,HG01867,HG01868,HG01871,HG02017,HG02028,HG02086,HG02116,HG02181,HG02353,HG02373,HG02383,HG02384,HG02392,HG02398,HG02401,HG02512,HG04141,NA18535,NA18553,NA18557,NA18564,NA18567,NA18571,NA18572,NA18573,NA18620,NA18635,NA18639,NA18947,NA18951,NA18972,NA18990,NA19006,NA19025,NA19072,NA19079,NA19083,NA20359 nsv1139464 1 672200 675000 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977051 M 2 1 0 "" KWS2 esv3361605 1 673389 675587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692399 M 185 1 0 "" NA12878 esv3345025 1 673589 674987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692400 M 185 1 0 "" NA12891 nsv1124556 1 679100 686700 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976610 M 2 1 0 "" KWS2 nsv1147312 1 704699 712200 CNV duplication John_et_al_2014 26484159 Sequencing nssv4000084 M 1 1 0 LOC100288069 KWB1 nsv999785 1 707087 798959 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463004 M 29084 1 0 FAM87B,LINC00115,LINC01128,LOC100288069 esv2762129 1 707099 837085 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7004879 M 1109 1 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100288069 RW_0585 nsv1130938 1 709900 723900 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967636 M 2 0 1 LOC100288069 KWS2 nsv10161 1 712111 1708649 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv24602,nssv24600,nssv18108,nssv28946,nssv28533,nssv26882,nssv21436,nssv21448,nssv21431,nssv28031,nssv28029,nssv26877,nssv24610,nssv28921,nssv28038,nssv26876,nssv24621,nssv28552,nssv28048,nssv28542,nssv28940,nssv26892,nssv21429,nssv26879,nssv28558,nssv26888 M 31 11 7 ACAP3,AGRN,ANKRD65,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf233,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,FAM41C,FAM87B,GLTPD1,HES4,ISG15,KLHL17,LINC00115,LINC01128,LOC100130417,LOC100288069,LOC148413,LOC254099,MIB2,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,MIR6808,MMP23A,MMP23B,MRPL20,MXRA8,NADK,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM240,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 NA07048,NA10839,NA10863,NA12740,NA12872,NA18504,NA18537,NA18552,NA18564,NA18572,NA18972,NA19144,NA19173,NA19221 dgv2n111 1 712545 813318 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nsv1161682,nsv1161364 M 369 2 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100288069 esv3584977 1 713044 755966 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839038,essv9839037,essv9839039 M 2504 0 3 FAM87B,LOC100288069 HG01444,NA18976,NA20520 esv3584978 1 713044 755966 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839153,essv9839152,essv9839151,essv9839086,essv9839053,essv9839043,essv9839052,essv9839042,essv9839041,essv9839040,essv9839046,essv9839051,essv9839045,essv9839044,essv9839047,essv9839050,essv9839049,essv9839048,essv9839054,essv9839059,essv9839068,essv9839085,essv9839055,essv9839058,essv9839057,essv9839056,essv9839062,essv9839067,essv9839061,essv9839060,essv9839063,essv9839066,essv9839065,essv9839064,essv9839084,essv9839075,essv9839069,essv9839070,essv9839074,essv9839071,essv9839073,essv9839072,essv9839078,essv9839083,essv9839077,essv9839076,essv9839079,essv9839082,essv9839081,essv9839080,essv9839091,essv9839117,essv9839100,essv9839090,essv9839087,essv9839150,essv9839089,essv9839088,essv9839094,essv9839099,essv9839093,essv9839092,essv9839098,essv9839095,essv9839097,essv9839096,essv9839102,essv9839107,essv9839101,essv9839116,essv9839106,essv9839103,essv9839105,essv9839104,essv9839110,essv9839115,essv9839109,essv9839108,essv9839111,essv9839114,essv9839113,essv9839112,essv9839123,essv9839119,essv9839149,essv9839118,essv9839132,essv9839122,essv9839121,essv9839120,essv9839124,essv9839131,essv9839126,essv9839125,essv9839127,essv9839130,essv9839128,essv9839129,essv9839139,essv9839134,essv9839148,essv9839133,essv9839138,essv9839135,essv9839137,essv9839136,essv9839142,essv9839147,essv9839141,essv9839140,essv9839143,essv9839146,essv9839145,essv9839144,essv9839212,essv9839179,essv9839154,essv9839162,essv9839161,essv9839160,essv9839156,essv9839155,essv9839159,essv9839158,essv9839157,essv9839164,essv9839178,essv9839169,essv9839163,essv9839168,essv9839165,essv9839167,essv9839166,essv9839172,essv9839177,essv9839171,essv9839170,essv9839173,essv9839176,essv9839175,essv9839174,essv9839185,essv9839180,essv9839194,essv9839211,essv9839184,essv9839181,essv9839183,essv9839182,essv9839188,essv9839193,essv9839187,essv9839186,essv9839189,essv9839192,essv9839191,essv9839190,essv9839196,essv9839210,essv9839201,essv9839195,essv9839200,essv9839197,essv9839198,essv9839199,essv9839209,essv9839203,essv9839202,essv9839204,essv9839205,essv9839208,essv9839207,essv9839206,essv9839217,essv9839226,essv9839216,essv9839215,essv9839214,essv9839213,essv9839225,essv9839219,essv9839218,essv9839220,essv9839224,essv9839221,essv9839222,essv9839223,essv9839228,essv9839233,essv9839227,essv9839232,essv9839229,essv9839231,essv9839230,essv9839236,essv9839234,essv9839241,essv9839235,essv9839240,essv9839237,essv9839239,essv9839238 M 2504 202 0 FAM87B,LOC100288069 HG00131,HG00133,HG00148,HG00181,HG00255,HG00273,HG00277,HG00306,HG00344,HG00355,HG00362,HG00446,HG00457,HG00463,HG00475,HG00513,HG00543,HG00557,HG00593,HG00614,HG00620,HG00663,HG00675,HG00690,HG00692,HG00740,HG00766,HG00867,HG00879,HG01028,HG01088,HG01092,HG01119,HG01259,HG01359,HG01365,HG01384,HG01390,HG01413,HG01438,HG01512,HG01565,HG01571,HG01626,HG01669,HG01682,HG01709,HG01746,HG01747,HG01784,HG01798,HG01840,HG01857,HG01865,HG01867,HG01868,HG01871,HG01880,HG01958,HG01971,HG01986,HG02017,HG02028,HG02079,HG02111,HG02113,HG02116,HG02181,HG02220,HG02223,HG02299,HG02334,HG02353,HG02373,HG02383,HG02384,HG02392,HG02398,HG02401,HG02419,HG02442,HG02477,HG02512,HG02561,HG02562,HG02577,HG02623,HG02724,HG02734,HG02768,HG02775,HG02798,HG02807,HG02808,HG02813,HG02878,HG02952,HG03015,HG03189,HG03196,HG03234,HG03240,HG03343,HG03401,HG03484,HG03511,HG03515,HG03611,HG03615,HG03687,HG03695,HG03718,HG03731,HG03733,HG03774,HG03805,HG03812,HG03826,HG03844,HG03858,HG03862,HG03870,HG03899,HG03905,HG03944,HG04029,HG04094,HG04141,HG04159,HG04185,NA07056,NA07357,NA11918,NA11995,NA12750,NA12777,NA12872,NA12873,NA18535,NA18553,NA18557,NA18564,NA18567,NA18571,NA18572,NA18573,NA18620,NA18635,NA18639,NA18916,NA18947,NA18951,NA18972,NA18989,NA18990,NA19006,NA19025,NA19031,NA19070,NA19079,NA19083,NA19200,NA19375,NA19449,NA19712,NA19749,NA19782,NA19792,NA19904,NA20278,NA20291,NA20332,NA20346,NA20359,NA20505,NA20507,NA20524,NA20532,NA20534,NA20539,NA20761,NA20766,NA20792,NA20806,NA20808,NA20811,NA20812,NA20858,NA20859,NA20885,NA20889,NA20892,NA21089,NA21094,NA21101,NA21111,NA21119,NA21124,NA21125,NA21141,NA21143,NA21144 nsv508722 1 717919 744073 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619756 M 4 1 0 "" NA10860 nsv510950 1 717919 747342 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621648,nssv624357 M 4 0 0 "" NA15510,NA18994 dgv3n111 1 718663 874902 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nsv1161536,nsv1161849 M 369 2 0 FAM41C,FAM87B,LINC00115,LINC01128,LOC100130417,SAMD11 nsv949808 1 723901 727200 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997115 M 1 1 0 "" BILGI_BIOE nsv1076310 1 724099 727000 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3765885 M 1 1 0 "" KWP1 nsv1148789 1 724099 728000 CNV duplication John_et_al_2014 26484159 Sequencing nssv3997574 M 1 1 0 "" KWB1 nsv1132275 1 724100 728000 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987042 M 2 1 0 "" KWS1 nsv513729 1 724132 726937 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626981 M 1 1 0 "" 1 nsv544880 1 724300 725737 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707630 M 17421 1 0 "" dgv4n54 1 724300 727037 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544884,nsv544883,nsv544882,nsv544881,nsv544888,nsv544886 M 17421 12 0 "" esv26272 1 724314 727245 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17593 M 40 0 4 "" NA11894,NA12006,NA12287,NA12828 nsv820807 1 724314 727245 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420291 M 1 1 0 "" NA10851 dgv5n54 1 724519 726794 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544885,nsv544887,nsv544890,nsv544891 M 17421 23 5 "" nsv544889 1 724849 726398 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707648 M 17421 0 1 "" nsv544892 1 725409 726794 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707672 M 17421 0 1 "" nsv544893 1 725737 752566 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707673 M 17421 0 1 "" esv2713915 1 726720 727137 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961443,essv6921667 M 96 0 2 "" SSM018,SSM027 nsv1112513 1 727100 750100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966611 M 2 0 1 "" KWS2 esv3584979 1 738570 742020 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839242 M 2504 0 1 "" NA19000 esv2656593 1 738618 742106 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5805894 M 1151 0 1 "" NA19000 nsv945734 1 738914 795375 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752032,nssv1751986,nssv1752024,nssv1751989,nssv1752026,nssv1751993,nssv1752023,nssv1752010,nssv1752015,nssv1752000,nssv1752041,nssv1752056,nssv1752004,nssv1752051,nssv1752009,nssv1751991,nssv1752045,nssv1751994,nssv1752018,nssv1751981,nssv1752029,nssv1752057,nssv1752036,nssv1752052,nssv1752044,nssv1751983,nssv1752034,nssv1752008,nssv1752035,nssv1751980,nssv1752005,nssv1751990,nssv1752039,nssv1752001,nssv1752037,nssv1751999,nssv1752020,nssv1751984,nssv1752002,nssv1752049,nssv1752012,nssv1751985,nssv1752047,nssv1751998,nssv1752046,nssv1752055,nssv1752019,nssv1752003,nssv1752040,nssv1751992,nssv1752011,nssv1752053,nssv1752013,nssv1752007,nssv1752025,nssv1751995,nssv1752030,nssv1751988,nssv1752022,nssv1752050,nssv1752043,nssv1751987,nssv1752006,nssv1752058,nssv1752048,nssv1752054,nssv1752027,nssv1751996,nssv1752016,nssv1751997,nssv1752042,nssv1751982,nssv1752028,nssv1752017,nssv1752033,nssv1752021,nssv1752031,nssv1752014,nssv1752038,nssv1751979 M 97 10 0 FAM87B,LINC00115,LINC01128 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1005935 1 740857 850675 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696752 M 29084 1 0 FAM41C,FAM87B,LINC00115,LINC01128 dgv1n67 1 746408 849937 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822808,nsv823919,nsv821697 M 31 4 0 FAM41C,FAM87B,LINC00115,LINC01128 NA18564,NA18947,NA18951,NA18972 esv3890635 1 752566 784023 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788744,essv25789091 M 3017 2 0 FAM87B,LINC00115,LINC01128 dgv1e55 1 752566 799463 CNV gain Pinto_et_al_2007 17911159 SNP array esv34681,esv34886 M 771 4 0 FAM87B,LINC00115,LINC01128 NA18620,NA18947 nsv517709 1 752566 1211292 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv677805,nssv657472,nssv662754,nssv677935,nssv667239,nssv654371,nssv658652,nssv688100,nssv681209,nssv668090,nssv662132,nssv660727,nssv691743,nssv652918,nssv683576,nssv670683,nssv680332,nssv669544,nssv700902 M 2026 18 1 AGRN,B3GALT6,C1orf159,C1orf170,FAM132A,FAM41C,FAM87B,HES4,ISG15,KLHL17,LINC00115,LINC01128,LOC100130417,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,SAMD11,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 esv27271 1 754193 762622 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14965 M 40 1 0 FAM87B,LINC00115 NA18916 nsv950386 1 754201 759100 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997126 M 1 0 1 FAM87B BILGI_BIOE esv33946 1 754205 779756 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv101171,essv96332 M 51 2 0 FAM87B,LINC00115,LINC01128 21618,22371 nsv1115329 1 755400 758800 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976381 M 2 1 0 "" KWS2 esv2713916 1 755671 756823 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6892259,essv6821118,essv6832527,essv6859129,essv6950479,essv6828947,essv6909990,essv6780792,essv6714176,essv6679102,essv6836112,essv6710539,essv6902471,essv6925638,essv6937615,essv6876308,essv6846928,essv6839905,essv6941722,essv6961444,essv6703800,essv6813123,essv6913942,essv6675157,essv6917364,essv6972236,essv6675156,essv6682789,essv6946436,essv6967856 M 96 0 29 "" SSM012,SSM013,SSM015,SSM016,SSM017,SSM019,SSM022,SSM023,SSM024,SSM025,SSM027,SSM028,SSM029,SSM032,SSM033,SSM034,SSM040,SSM042,SSM043,SSM068,SSM077,SSM079,SSM081,SSM082,SSM083,SSM084,SSM086,SSM088,SSM098 nsv1147722 1 755799 758800 CNV duplication John_et_al_2014 26484159 Sequencing nssv3996505 M 1 1 0 "" KWB1 nsv1076311 1 755899 758700 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3770041 M 1 1 0 "" KWP1 dgv1e201 1 756248 758841 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2725027,esv2746029 M 96 0 38 "" SSM003,SSM009,SSM016,SSM017,SSM020,SSM024,SSM026,SSM027,SSM031,SSM032,SSM033,SSM039,SSM043,SSM045,SSM047,SSM049,SSM055,SSM056,SSM058,SSM066,SSM067,SSM069,SSM070,SSM071,SSM073,SSM079,SSM083,SSM085,SSM086,SSM087,SSM088,SSM091,SSM093,SSM094,SSM095,SSM096,SSM098,SSM100 esv1032937 1 756267 756267 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3703690 M 2 1 0 "" HuRef esv2736138 1 756301 756354 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6846928 M 96 0 1 "" SSM086 esv2743807 1 756312 756571 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6859129,essv6675157 M 96 0 2 "" SSM032,SSM088 esv2744918 1 756340 756432 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6859129 M 96 0 1 "" SSM088 esv2747140 1 757864 758041 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6773385 M 96 0 1 "" SSM066 nsv442837 1 766101 809773 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617613,nssv1616724,nssv1616613,nssv1617835,nssv1616612,nssv1618057,nssv1617946,nssv1617502,nssv1618168,nssv1617391,nssv1617724 M 270 10 1 FAM41C,LINC01128 NA18564,NA18571,NA18572,NA18573,NA18620,NA18635,NA18947,NA18951,NA18972,NA18976,NA18990 esv2748251 1 766408 769112 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6695432,essv6759010 M 96 0 2 LINC01128 SSM006,SSM061 esv2661847 1 766593 769112 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6418188,essv5523850,essv6030252,essv5518894,essv5900400,essv5809976,essv6563096,essv5557684,essv6509658,essv5451591,essv5813808,essv5654029,essv6309202,essv5583588,essv6192957,essv5539265,essv6137789,essv5520084,essv6482771,essv5781826,essv6060841,essv5707758,essv6542198,essv5448104,essv6064913,essv5616233,essv6067864,essv5590254,essv6041253,essv5632149,essv6345187,essv5500219,essv6276121,essv5469214,essv6047722,essv5403827,essv6287654,essv5803927,essv6295988,essv5519573,essv5901179,essv5758742,essv6355316,essv6512898,essv6027023,essv5935659,essv6021317,essv6555045,essv5952876 M 1151 0 49 LINC01128 HG00448,HG00463,HG00512,HG00513,HG00553,HG00557,HG00583,HG00584,HG00608,HG00614,HG00620,HG00651,HG00663,HG00690,HG01066,HG01204,HG01359,HG01494,NA18553,NA18557,NA18564,NA18565,NA18573,NA18592,NA18595,NA18609,NA18613,NA18620,NA18873,NA18951,NA18964,NA18984,NA18985,NA18990,NA18999,NA19004,NA19066,NA19070,NA19074,NA19080,NA19083,NA19087,NA19213,NA19239,NA19461,NA19473,NA19655,NA19657,NA19747 esv3584980 1 766600 769112 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839277,essv9839407,essv9839381,essv9839243,essv9839276,essv9839245,essv9839249,essv9839275,essv9839244,essv9839258,essv9839246,essv9839248,essv9839247,essv9839250,essv9839257,essv9839252,essv9839251,essv9839253,essv9839256,essv9839255,essv9839254,essv9839265,essv9839260,essv9839274,essv9839259,essv9839264,essv9839261,essv9839262,essv9839263,essv9839268,essv9839266,essv9839273,essv9839267,essv9839269,essv9839272,essv9839271,essv9839270,essv9839301,essv9839306,essv9839300,essv9839278,essv9839279,essv9839339,essv9839287,essv9839406,essv9839380,essv9839281,essv9839286,essv9839280,essv9839282,essv9839285,essv9839284,essv9839283,essv9839293,essv9839288,essv9839299,essv9839305,essv9839292,essv9839289,essv9839291,essv9839290,essv9839298,essv9839295,essv9839304,essv9839294,essv9839297,essv9839303,essv9839296,essv9839302,essv9839312,essv9839309,essv9839338,essv9839308,essv9839307,essv9839321,essv9839311,essv9839310,essv9839315,essv9839313,essv9839320,essv9839314,essv9839319,essv9839316,essv9839318,essv9839317,essv9839328,essv9839323,essv9839322,essv9839337,essv9839324,essv9839327,essv9839326,essv9839325,essv9839331,essv9839336,essv9839330,essv9839329,essv9839332,essv9839335,essv9839334,essv9839333,essv9839379,essv9839369,essv9839352,essv9839342,essv9839405,essv9839343,essv9839341,essv9839340,essv9839346,essv9839351,essv9839345,essv9839344,essv9839350,essv9839347,essv9839349,essv9839348,essv9839354,essv9839368,essv9839359,essv9839353,essv9839358,essv9839355,essv9839357,essv9839356,essv9839362,essv9839367,essv9839361,essv9839360,essv9839363,essv9839366,essv9839365,essv9839364,essv9839378,essv9839377,essv9839387,essv9839404,essv9839373,essv9839372,essv9839371,essv9839370,essv9839376,essv9839375,essv9839386,essv9839374,essv9839385,essv9839382,essv9839383,essv9839384,essv9839394,essv9839389,essv9839403,essv9839388,essv9839393,essv9839390,essv9839392,essv9839391,essv9839397,essv9839402,essv9839396,essv9839395,essv9839398,essv9839401,essv9839400,essv9839399,essv9839416,essv9839412,essv9839411,essv9839410,essv9839414,essv9839409,essv9839415,essv9839408,essv9839413,essv9839423,essv9839418,essv9839417,essv9839422,essv9839419,essv9839421,essv9839420 M 2504 0 181 LINC01128 HG00313,HG00409,HG00421,HG00448,HG00452,HG00473,HG00475,HG00513,HG00531,HG00553,HG00583,HG00584,HG00607,HG00608,HG00651,HG00662,HG00675,HG00864,HG00956,HG01054,HG01055,HG01066,HG01083,HG01122,HG01204,HG01250,HG01254,HG01341,HG01348,HG01350,HG01357,HG01359,HG01362,HG01378,HG01393,HG01462,HG01488,HG01489,HG01494,HG01597,HG01794,HG01807,HG01810,HG01811,HG01813,HG01848,HG01858,HG01864,HG01915,HG01927,HG01947,HG01953,HG01968,HG01971,HG01982,HG01997,HG02025,HG02029,HG02051,HG02052,HG02082,HG02086,HG02121,HG02130,HG02133,HG02140,HG02150,HG02165,HG02181,HG02185,HG02186,HG02298,HG02312,HG02339,HG02353,HG02375,HG02382,HG02383,HG02384,HG02391,HG02392,HG02401,HG02408,HG02586,HG02675,HG02807,HG02839,HG02878,HG02884,HG03006,HG03135,HG03547,HG03607,HG03631,HG03634,HG03716,HG03745,HG03755,HG03762,HG03824,HG03838,HG03844,HG03856,HG03875,HG03890,HG03937,HG04018,HG04076,HG04094,HG04176,HG04180,HG04210,HG04214,HG04219,HG04239,NA18528,NA18535,NA18552,NA18553,NA18558,NA18560,NA18565,NA18567,NA18570,NA18571,NA18573,NA18579,NA18592,NA18595,NA18608,NA18609,NA18613,NA18620,NA18623,NA18629,NA18749,NA18757,NA18873,NA18940,NA18951,NA18952,NA18962,NA18964,NA18966,NA18972,NA18976,NA18984,NA18985,NA18993,NA18999,NA19004,NA19011,NA19058,NA19066,NA19074,NA19079,NA19080,NA19087,NA19185,NA19213,NA19239,NA19310,NA19461,NA19473,NA19655,NA19657,NA19726,NA19729,NA19732,NA19741,NA19747,NA19755,NA19758,NA19762,NA20862,NA20882,NA20892,NA20900,NA20903,NA20911,NA21115 esv2762248 1 768793 791010 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007410 M 1109 0 1 LINC01128 SW_1162 nsv1159750 1 768793 818586 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nssv4025990 M 369 1 0 FAM41C,LINC01128 nsv298 1 772399 792659 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3151 M 9 1 0 LINC01128 NA12878 esv3584981 1 773090 852664 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839425,essv9839424 M 2504 0 2 FAM41C,LINC01128 HG00743,HG01444 esv3584982 1 773090 852664 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839472,essv9839471,essv9839470,essv9839469,essv9839466,essv9839433,essv9839467,essv9839473,essv9839468,essv9839432,essv9839426,essv9839431,essv9839427,essv9839430,essv9839429,essv9839428,essv9839438,essv9839464,essv9839447,essv9839465,essv9839434,essv9839437,essv9839436,essv9839435,essv9839441,essv9839439,essv9839446,essv9839440,essv9839445,essv9839442,essv9839443,essv9839444,essv9839449,essv9839463,essv9839454,essv9839448,essv9839453,essv9839450,essv9839452,essv9839451,essv9839457,essv9839462,essv9839456,essv9839455,essv9839461,essv9839458,essv9839460,essv9839459,essv9839478,essv9839477,essv9839474,essv9839476,essv9839475,essv9839481,essv9839480,essv9839479,essv9839482,essv9839484,essv9839483 M 2504 59 0 FAM41C,LINC01128 HG00446,HG00457,HG00463,HG00475,HG00513,HG00543,HG00557,HG00593,HG00614,HG00620,HG00663,HG00675,HG00690,HG00692,HG00766,HG00867,HG00879,HG01028,HG01798,HG01840,HG01857,HG01867,HG01868,HG01871,HG02017,HG02028,HG02116,HG02181,HG02353,HG02373,HG02383,HG02384,HG02392,HG02398,HG02401,HG02512,HG04141,NA18535,NA18553,NA18557,NA18564,NA18567,NA18571,NA18572,NA18573,NA18620,NA18635,NA18639,NA18947,NA18951,NA18972,NA18989,NA18990,NA19006,NA19025,NA19070,NA19079,NA19083,NA20359 esv2749362 1 774752 774809 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6853155 M 96 0 1 LINC01128 SSM087 esv2713917 1 774759 774921 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6876319,essv6846930,essv6929011,essv6967857 M 96 0 4 LINC01128 SSM012,SSM020,SSM028,SSM086 esv2715028 1 774866 774926 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954639 M 96 0 1 LINC01128 SSM026 esv3584983 1 775292 791968 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839487,essv9839486,essv9839485,essv9839494,essv9839489,essv9839488,essv9839493,essv9839490,essv9839492,essv9839491,essv9839497,essv9839496,essv9839495,essv9839498,essv9839499 M 2504 0 15 LINC01128 HG01177,HG01350,HG01357,HG01359,HG01374,HG01375,HG01389,HG01491,HG01498,HG01680,HG01766,HG01785,NA07051,NA18976,NA20812 esv3539675 1 776659 792588 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9738422 M 767 0 1 LINC01128 esv2663916 1 776769 791881 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5463605,essv6143600,essv5826571,essv6257481,essv6345413,essv6094713,essv6020202 M 1151 0 7 LINC01128 HG01350,HG01357,HG01359,HG01374,HG01375,HG01389,HG01491 nsv1009537 1 777122 850675 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467703 M 29084 1 0 FAM41C,LINC01128 nsv832980 1 783659 942417 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443740 M 95 1 0 C1orf170,FAM41C,HES4,KLHL17,LINC01128,LOC100130417,NOC2L,PLEKHN1,SAMD11 esv2716139 1 788933 789202 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6950480 M 96 0 1 LINC01128 SSM025 esv1517733 1 789021 789070 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4242314 M 2 0 1 LINC01128 HuRef nsv508924 1 789759 820329 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619757 M 4 1 0 FAM41C,LINC01128 NA10860 nsv1074928 1 790696 790756 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3768186 M 1 0 1 LINC01128 KWP1 nsv1133788 1 790697 790756 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969359 M 2 0 1 LINC01128 KWS2 esv3584984 1 794496 799549 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839501,essv9839500 M 2504 0 2 LINC01128 NA18976,NA19649 nsv945735 1 795375 796622 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752079,nssv1752120,nssv1752080,nssv1752104,nssv1752066,nssv1752111,nssv1752136,nssv1752135,nssv1752143,nssv1752103,nssv1752138,nssv1752108,nssv1752074,nssv1752118,nssv1752090,nssv1752084,nssv1752061,nssv1752101,nssv1752063,nssv1752149,nssv1752068,nssv1752153,nssv1752140,nssv1752107,nssv1752060,nssv1752148,nssv1752139,nssv1752106,nssv1752069,nssv1752131,nssv1752081,nssv1752146,nssv1752062,nssv1752134,nssv1752141,nssv1752154,nssv1752078,nssv1752150,nssv1752065,nssv1752112,nssv1752072,nssv1752059,nssv1752087,nssv1752152,nssv1752142,nssv1752094,nssv1752083,nssv1752125,nssv1752071,nssv1752130,nssv1752064,nssv1752124,nssv1752145,nssv1752095,nssv1752075,nssv1752089,nssv1752070,nssv1752127,nssv1752144,nssv1752116,nssv1752067,nssv1752155,nssv1752073,nssv1752085,nssv1752077,nssv1752098,nssv1752088,nssv1752132,nssv1752076,nssv1752082,nssv1752137,nssv1752091,nssv1752092,nssv1752113,nssv1752147,nssv1752126,nssv1752100,nssv1752117,nssv1752099,nssv1752105,nssv1752122,nssv1752123,nssv1752119,nssv1752110,nssv1752121,nssv1752109,nssv1752133,nssv1752086,nssv1752097,nssv1752115,nssv1752102,nssv1752096,nssv1752129,nssv1752128,nssv1752151,nssv1752114,nssv1752093 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945738 1 796622 801314 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752233,nssv1752205,nssv1752162,nssv1752211,nssv1752228,nssv1752183,nssv1752177,nssv1752197,nssv1752163,nssv1752212,nssv1752176,nssv1752215,nssv1752160,nssv1752219,nssv1752166,nssv1752201,nssv1752170,nssv1752220,nssv1752168,nssv1752216,nssv1752229,nssv1752194,nssv1752231,nssv1752190,nssv1752167,nssv1752208,nssv1752159,nssv1752196,nssv1752178,nssv1752198,nssv1752165,nssv1752199,nssv1752187,nssv1752193,nssv1752185,nssv1752203,nssv1752232,nssv1752200,nssv1752180,nssv1752156,nssv1752230,nssv1752217,nssv1752169,nssv1752209,nssv1752161,nssv1752179,nssv1752175,nssv1752186,nssv1752172,nssv1752191,nssv1752157,nssv1752181,nssv1752227,nssv1752204,nssv1752184,nssv1752221,nssv1752171,nssv1752214,nssv1752226,nssv1752210,nssv1752234,nssv1752182,nssv1752164,nssv1752192,nssv1752235,nssv1752222,nssv1752174,nssv1752223,nssv1752173,nssv1752195,nssv1752158,nssv1752206,nssv1752225,nssv1752188,nssv1752189,nssv1752213,nssv1752202,nssv1752224,nssv1752218,nssv1752207 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945739 1 801314 826539 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753188,nssv1753212,nssv1752247,nssv1753199,nssv1752243,nssv1749324,nssv1752254,nssv1753216,nssv1753191,nssv1749330,nssv1752244,nssv1753231,nssv1749317,nssv1753213,nssv1752242,nssv1749332,nssv1749313,nssv1753218,nssv1752256,nssv1753227,nssv1749319,nssv1753196,nssv1752250,nssv1749310,nssv1749322,nssv1749334,nssv1749318,nssv1749311,nssv1752246,nssv1753195,nssv1752238,nssv1749312,nssv1752239,nssv1753205,nssv1752251,nssv1753201,nssv1749323,nssv1753221,nssv1752258,nssv1753229,nssv1749316,nssv1753230,nssv1749314,nssv1753206,nssv1752248,nssv1753226,nssv1752240,nssv1749333,nssv1753189,nssv1753185,nssv1749321,nssv1753215,nssv1752249,nssv1753187,nssv1752241,nssv1753209,nssv1752237,nssv1753198,nssv1752252,nssv1753200,nssv1752257,nssv1752236,nssv1752255,nssv1753217,nssv1752245,nssv1753203,nssv1753184,nssv1753192,nssv1752253,nssv1753214,nssv1749320,nssv1753219,nssv1753223,nssv1749327,nssv1749328,nssv1753228,nssv1749325,nssv1753210,nssv1753222,nssv1753186,nssv1753224,nssv1753208,nssv1753204,nssv1753193,nssv1749331,nssv1752259,nssv1753194,nssv1753211,nssv1753232,nssv1749329,nssv1753220,nssv1753202,nssv1753225,nssv1749309,nssv1753207,nssv1753197,nssv1753190 M 97 10 0 FAM41C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1069885 1 802251 802251 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3978908 M 2 1 0 "" HuRef dgv4n111 1 804456 850017 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nsv1159974,nsv1160643 M 369 3 0 FAM41C nsv428334 1 809751 1155949 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450908 M 62 1 0 AGRN,C1orf159,C1orf170,FAM41C,HES4,ISG15,KLHL17,LOC100130417,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,SAMD11,SDF4,TNFRSF18,TNFRSF4,TTLL10 HGDP00467 esv3325034 1 811073 812079 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652099 M 185 1 0 FAM41C NA19240 esv991325 1 811077 811838 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564868 M 3 1 0 FAM41C HuRef nsv1073556 1 811199 811900 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766392 M 1 0 1 FAM41C KWP1 nsv1142735 1 811300 811700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994234 M 2 0 1 FAM41C KWS1 dgv2n67 1 812998 1361880 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv826141,nsv825030 M 31 2 0 ACAP3,AGRN,ANKRD65,AURKAIP1,B3GALT6,C1orf159,C1orf170,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC100130417,LOC148413,LOC254099,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,MIR6808,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 NA18968,NA18969 nsv950387 1 815101 826200 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997137 M 1 1 0 "" BILGI_BIOE nsv1122279 1 815600 815683 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969730 M 2 0 1 "" KWS2 nsv1133789 1 817209 817273 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969360 M 2 0 1 "" KWS2 nsv1124557 1 817700 825300 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976611 M 2 1 0 "" KWS2 nsv1145304 1 818330 818404 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982395 M 2 0 1 "" KWS1 esv3382589 1 820803 820855 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740932 M 185 1 0 "" NA12878 esv3358119 1 822853 822861 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863668,essv7863667 M 185 2 0 "" NA12005,NA18953 nsv1137714 1 823373 823426 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990215 M 2 0 1 "" KWS2 esv3400943 1 825053 825053 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825303 M 185 1 0 "" NA19240 nsv945562 1 826539 834209 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572151,nssv2572181,nssv2572155,nssv2572161,nssv2572156,nssv2572176,nssv2572158,nssv2572177,nssv2572184,nssv2572182,nssv2572153,nssv2572169,nssv2572160,nssv2572190,nssv2572166,nssv2572185,nssv2572179,nssv2572178,nssv2572164,nssv2572175,nssv2572171,nssv2572167,nssv2572183,nssv2572173,nssv2572194,nssv2572180,nssv2572159,nssv2572188,nssv2572157,nssv2572165,nssv2572172,nssv2572193,nssv2572154,nssv2572196,nssv2572170,nssv2572192,nssv2572189,nssv2572168,nssv2572191,nssv2572195,nssv2572174,nssv2572162,nssv2572163,nssv2572150,nssv2572149,nssv2572152,nssv2572187,nssv2572186 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509035 1 826786 921104 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619758,nssv621079 M 4 2 0 C1orf170,KLHL17,LOC100130417,NOC2L,PLEKHN1,SAMD11 NA10860,NA15510 nsv950451 1 834801 1029900 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997148 M 1 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 BILGI_BIOE nsv1112514 1 839500 840500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966612 M 2 0 1 "" KWS2 nsv1074399 1 839599 840800 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772204 M 1 0 1 "" KWP1 esv1562509 1 844600 844866 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3716763 M 2 0 1 "" HuRef esv2762302 1 850017 1041700 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7008521 M 1109 1 0 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 SW_1358 dgv6n54 1 852772 870310 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544894,nsv544896 M 17421 0 2 LOC100130417,SAMD11 nsv544895 1 852772 990280 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707675 M 17421 0 1 AGRN,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,SAMD11 nsv1074403 1 859199 861000 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3763507 M 1 0 1 "" KWP1 nsv544897 1 860045 870310 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707677,nssv707678 M 17421 1 1 SAMD11 nsv544898 1 860045 879317 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707679 M 17421 1 0 SAMD11 dgv7n54 1 861134 870645 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544900,nsv544899 M 17421 0 5 SAMD11 dgv8n54 1 861134 879317 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544901,nsv544907 M 17421 0 2 SAMD11 dgv9n54 1 861134 888220 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544902,nsv544903 M 17421 0 2 NOC2L,SAMD11 nsv544904 1 864938 870257 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707689,nssv707688 M 17421 2 0 SAMD11 dgv10n54 1 864938 870645 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544906,nsv544905 M 17421 5 7 SAMD11 nsv1074938 1 869099 870500 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767822 M 1 0 1 SAMD11 KWP1 nsv1142736 1 869100 870100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994235 M 2 0 1 SAMD11 KWS1 esv3550787 1 869249 870391 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9749534 M 767 0 1 SAMD11 nsv511670 1 869251 870860 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626307 M 1 0 1 SAMD11 1 esv27608 1 869310 870347 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10036 M 40 24 12 SAMD11 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19257 esv989364 1 869415 870347 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586109 M 3 0 1 SAMD11 HuRef dgv11n54 1 869443 870257 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544915,nsv544920,nsv544908,nsv544916,nsv544909 M 17421 0 8 SAMD11 dgv12n54 1 869443 870310 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544910,nsv544917,nsv544911,nsv544922,nsv544927,nsv544921,nsv544926 M 17421 99 267 SAMD11 dgv13n54 1 869443 870645 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544912,nsv544923 M 17421 6 24 SAMD11 dgv14n54 1 869443 873558 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544929,nsv544918,nsv544913 M 17421 4 0 SAMD11 dgv15n54 1 869443 879317 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544914,nsv544925,nsv544933 M 17421 0 17 SAMD11 esv1732269 1 869471 869583 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4110931 M 2 0 1 SAMD11 HuRef esv2853903 1 869527 870339 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123470 M 1 0 1 SAMD11 HuRef nsv955441 1 869544 870300 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000435 M 1 0 1 SAMD11 BILGI_BIOE nsv544919 1 869550 870034 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707961,nssv708052,nssv707996,nssv707998,nssv707836,nssv707837,nssv707973,nssv707909,nssv707854,nssv707865,nssv708076,nssv707841,nssv707972,nssv708046,nssv707848,nssv707980,nssv707845,nssv708075,nssv708065,nssv707985,nssv707917,nssv707853,nssv707849,nssv708047,nssv707921,nssv708067,nssv708053,nssv707877,nssv707850,nssv707851,nssv707852,nssv707913,nssv707976,nssv707926,nssv708063,nssv707843,nssv707840,nssv708009,nssv707856,nssv708022,nssv708062,nssv707991,nssv707970,nssv708057,nssv708039,nssv708084,nssv707855,nssv708083,nssv707999,nssv708054,nssv708015,nssv707864,nssv708061,nssv707925,nssv707859,nssv707858,nssv707857,nssv707863,nssv707977,nssv708058,nssv707860,nssv708059,nssv707974,nssv708026,nssv708056,nssv707862,nssv707924,nssv707861,nssv707922,nssv707923,nssv708051,nssv707997,nssv707957,nssv708042,nssv707978,nssv708001,nssv708000,nssv707868,nssv708035,nssv708032,nssv707958,nssv707964,nssv707846,nssv707931,nssv708041,nssv708074,nssv707975,nssv707916,nssv707927,nssv708085,nssv707847,nssv708005,nssv707839,nssv707866,nssv707967,nssv707867,nssv707876,nssv707990,nssv708086,nssv708087,nssv708068,nssv708025,nssv708019,nssv708031,nssv708072,nssv707915,nssv707930,nssv707932,nssv707838,nssv708040,nssv708033,nssv708021,nssv708008,nssv707911,nssv708018,nssv707875,nssv707912,nssv707910,nssv708073,nssv707989,nssv707874,nssv707871,nssv707869,nssv707870,nssv707928,nssv707873,nssv708071,nssv707979,nssv707929,nssv708066,nssv707872,nssv708070,nssv708028,nssv707881,nssv708064,nssv708048,nssv708007,nssv707817,nssv708082,nssv707823,nssv707993,nssv707844,nssv707908,nssv707933,nssv707883,nssv707879,nssv707878,nssv707880,nssv708024,nssv708037,nssv707893,nssv707882,nssv707968,nssv707971,nssv707914,nssv707905,nssv707987,nssv708017,nssv707920,nssv707956,nssv708010,nssv708088,nssv707962,nssv708080,nssv707887,nssv708044,nssv707822,nssv707969,nssv708030,nssv707982,nssv707818,nssv707981,nssv707886,nssv708078,nssv708016,nssv707906,nssv707988,nssv707963,nssv708027,nssv707885,nssv708077,nssv708043,nssv707884,nssv708055,nssv707820,nssv708079,nssv708023,nssv708069,nssv707960,nssv707888,nssv707992,nssv707821,nssv707819,nssv708014,nssv708036,nssv707891,nssv708050,nssv707892,nssv707937,nssv707936,nssv707934,nssv707935,nssv707890,nssv707889,nssv708045,nssv707842,nssv708006,nssv708002,nssv708029,nssv707995,nssv708011,nssv708034,nssv707902,nssv707965,nssv707959,nssv708089,nssv707983,nssv707904,nssv707834,nssv707919,nssv707955,nssv708060,nssv707943,nssv708081,nssv707938,nssv707835,nssv707939,nssv707824,nssv707899,nssv707966,nssv707828,nssv708091,nssv707900,nssv708004,nssv708090,nssv707829,nssv707895,nssv707941,nssv707894,nssv707827,nssv707942,nssv707898,nssv708093,nssv707940,nssv708092,nssv707896,nssv708094,nssv707826,nssv707825,nssv707897,nssv708038,nssv707918,nssv707830,nssv707994,nssv707946,nssv708049,nssv707901,nssv707986,nssv707945,nssv708020,nssv707954,nssv707944,nssv707832,nssv707953,nssv707948,nssv707947,nssv708012,nssv708003,nssv708013,nssv707907,nssv707952,nssv707833,nssv707903,nssv707949,nssv707831,nssv707984,nssv707951,nssv707950 M 17421 0 278 SAMD11 nsv544924 1 869550 873558 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708369,nssv708370,nssv708372,nssv708371,nssv708368,nssv708373 M 17421 1 5 SAMD11 esv1062785 1 869596 870324 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4275138 M 2 0 1 SAMD11 HuRef nsv544928 1 869603 870645 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708410 M 17421 1 0 SAMD11 nsv544930 1 869809 870310 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708412,nssv708434,nssv708432,nssv708426,nssv708422,nssv708431,nssv708416,nssv708436,nssv708439,nssv708427,nssv708429,nssv708424,nssv708440,nssv708435,nssv708438,nssv708441,nssv708433,nssv708425,nssv708419,nssv708413,nssv708417,nssv708415,nssv708418,nssv708420,nssv708437,nssv708421,nssv708414,nssv708430,nssv708428,nssv708423 M 17421 0 30 SAMD11 dgv16n54 1 869809 870645 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544934,nsv544931 M 17421 0 9 SAMD11 nsv544932 1 869809 873558 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708450 M 17421 0 1 SAMD11 esv2066434 1 871493 871867 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4643302 M 1 0 1 SAMD11 NA18507 esv3584987 1 873391 874042 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839571,essv9839574,essv9839570,essv9839569,essv9839573,essv9839572,essv9839575 M 2504 0 7 SAMD11 HG00543,HG00632,HG01859,HG01866,NA18544,NA18643,NA19074 esv2663451 1 873417 874049 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5748399,essv5957539,essv5733502,essv6117771 M 1151 0 4 SAMD11 HG00543,NA18544,NA19012,NA19074 nsv1013524 1 874890 1097335 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3475564 M 29084 1 0 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC254099,NOC2L,PLEKHN1,RNF223,SAMD11 nsv1160644 1 875032 1156043 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nssv4026434 M 369 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,SAMD11,SDF4,TNFRSF18,TNFRSF4,TTLL10 nsv1074942 1 877199 878100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3763877 M 1 0 1 SAMD11 KWP1 dgv13e59 1 885189 886187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3428898,esv3364706 M 185 2 0 NOC2L NA19239,NA19240 nsv1074944 1 895399 896600 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766571 M 1 0 1 KLHL17 KWP1 nsv482036 1 895967 901095 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558397 M 1 1 0 KLHL17 KB1 esv1003697 1 900011 900085 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568238 M 3 0 1 KLHL17 HuRef nsv159315 1 900149 900224 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177893 M 24 KLHL17 esv3451859 1 904489 905387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692422 M 185 1 0 PLEKHN1 NA19239 esv1001028 1 911055 913734 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565170 M 3 1 0 C1orf170 HuRef esv2670613 1 911645 915192 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6010738,essv6389326,essv5641324,essv6400366,essv5841281,essv6402564,essv5889195,essv6587307,essv5993200,essv6255541,essv5564928,essv6523376,essv5462014,essv6128474,essv5787081,essv6418259,essv5804523,essv6423047,essv5905964,essv6430407,essv5836989,essv6430927,essv5482863,essv6505246,essv5738531,essv6536645,essv5442020,essv6436893,essv5489577,essv6442790,essv5471639,essv6443495,essv5615808,essv6185252,essv5475375,essv6449523,essv5506395,essv6263463,essv5535610,essv6467493,essv5495292,essv6480331,essv5615197,essv6483725,essv5723792,essv6480133,essv5620498,essv6187040,essv5584422,essv6159415,essv6005729,essv6237379,essv5840689,essv6598157,essv5975232,essv6189900,essv5914563,essv6150879,essv5925242,essv6199706,essv5712285,essv6313757,essv5467419,essv6314870,essv5854734,essv6317482,essv5572747,essv6324543,essv5973675,essv6325639,essv5833597,essv6267868,essv5710426,essv6327051,essv5821063,essv6327372,essv5869388,essv6099101,essv5768893,essv6330051,essv5781640,essv6021580,essv5567082,essv6016618,essv5789556,essv6042185,essv5963116,essv6279545,essv5871535,essv6284507,essv5684098,essv6338447,essv5441563,essv6227956,essv5762189,essv6526343,essv5541532,essv6204209,essv5419278,essv6068647,essv5422914,essv6191793,essv5681970,essv6469348,essv5477110,essv6555599,essv5601933,essv6099762,essv5452156,essv6585690,essv5944648,essv6191383,essv5864207,essv6560863,essv5718556,essv6134181,essv5486053,essv6078680,essv5905036,essv6109108,essv5911759,essv6464009,essv5703730,essv6535946,essv5773855,essv6553074,essv5563021,essv6370075,essv5703177,essv6263431,essv5724880,essv6102802,essv5779263,essv6085046,essv5861730,essv6376621,essv5500942,essv6502636,essv5962986,essv6379774,essv5680397,essv6186898,essv5778222,essv6387100,essv5955626,essv6521104 M 1151 0 146 C1orf170 NA18526,NA18530,NA18532,NA18534,NA18535,NA18536,NA18538,NA18539,NA18541,NA18542,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18553,NA18555,NA18557,NA18558,NA18559,NA18560,NA18561,NA18563,NA18565,NA18566,NA18567,NA18570,NA18573,NA18574,NA18576,NA18577,NA18579,NA18592,NA18593,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18605,NA18606,NA18608,NA18609,NA18610,NA18611,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18621,NA18622,NA18623,NA18624,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18940,NA18941,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18950,NA18951,NA18952,NA18953,NA18956,NA18961,NA18964,NA18965,NA18967,NA18968,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18980,NA18981,NA18982,NA18983,NA18984,NA18985,NA18986,NA18987,NA18988,NA18989,NA18990,NA18999,NA19000,NA19003,NA19004,NA19005,NA19007,NA19009,NA19012,NA19054,NA19055,NA19056,NA19058,NA19059,NA19062,NA19063,NA19065,NA19066,NA19067,NA19068,NA19070,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19082,NA19083,NA19084,NA19085,NA19087,NA19088 nsv1073996 1 911899 913600 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764727 M 1 0 1 C1orf170 KWP1 dgv7n106 1 911900 913700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1121738,nsv1142737 M 2 0 2 C1orf170 KWS1,KWS2 esv1165796 1 912278 913308 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4038215 M 2 0 1 C1orf170 HuRef esv997839 1 928681 930764 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565560 M 3 0 1 "" HuRef nsv159328 1 931665 931730 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177906 M 24 "" esv1776849 1 931780 931780 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3713900 M 2 1 0 "" HuRef nsv159419 1 931981 932111 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177997 M 24 "" nsv827252 1 934105 936507 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436318 M 31 1 0 HES4 NA18542 nsv945741 1 942574 1027999 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749378,nssv1749431,nssv1749389,nssv1749421,nssv1749377,nssv1749443,nssv1749452,nssv1749424,nssv1749364,nssv1749418,nssv1749365,nssv1749390,nssv1749379,nssv1749412,nssv1749367,nssv1749408,nssv1749385,nssv1749463,nssv1749368,nssv1749433,nssv1749393,nssv1749437,nssv1749387,nssv1749401,nssv1749453,nssv1749396,nssv1749384,nssv1749466,nssv1749376,nssv1749426,nssv1749451,nssv1749406,nssv1749448,nssv1749410,nssv1749380,nssv1749420,nssv1749458,nssv1749417,nssv1749455,nssv1749460,nssv1749366,nssv1749464,nssv1749370,nssv1749400,nssv1749369,nssv1749430,nssv1749374,nssv1749391,nssv1749373,nssv1749444,nssv1749371,nssv1749399,nssv1749457,nssv1749439,nssv1749456,nssv1749411,nssv1749381,nssv1749469,nssv1749395,nssv1749467,nssv1749454,nssv1749423,nssv1749447,nssv1749465,nssv1749382,nssv1749392,nssv1749386,nssv1749459,nssv1749397,nssv1749415,nssv1749375,nssv1749441,nssv1749440,nssv1749428,nssv1749445,nssv1749409,nssv1749414,nssv1749446,nssv1749436,nssv1749435,nssv1749425,nssv1749468,nssv1749404,nssv1749434,nssv1749429,nssv1749422,nssv1749413,nssv1749363,nssv1749398,nssv1749403,nssv1749432,nssv1749462,nssv1749419,nssv1749388,nssv1749442,nssv1749402,nssv1749407 M 97 10 0 AGRN,C1orf159,ISG15,RNF223 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv828363 1 944680 948776 CNV gain+loss Park_et_al_2010 20364138 Oligo aCGH nssv1436320,nssv1434856 M 31 1 1 "" NA18542,NA18942 nsv509146 1 945890 1046568 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619759,nssv621080 M 4 2 0 AGRN,C1orf159,ISG15,RNF223 NA10860,NA15510 esv3584988 1 947113 948003 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839577,essv9839576,essv9839578,essv9839579 M 2504 0 4 "" HG02546,NA19307,NA19338,NA19401 esv2665646 1 947121 948001 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5634163,essv6062495,essv6082937 M 1151 0 3 "" NA19338,NA19359,NA19401 dgv17n54 1 949608 964438 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544936,nsv544935 M 17421 0 2 AGRN,ISG15 dgv8n106 1 952312 952450 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1130265,nsv1129865 M 2 0 1 "" KWS2 nsv1067927 1 953124 953320 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3762276 M 1 0 1 "" KWP1 nsv1137715 1 953161 953319 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990216,nssv3982097 M 2 0 2 "" KWS1,KWS2 nsv1142738 1 954800 956400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994237 M 2 0 1 AGRN KWS1 nsv1160772 1 962965 1268847 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nssv4026545 M 369 1 0 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 esv29017 1 963659 964480 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19930 M 40 0 6 AGRN NA11931,NA12044,NA12414,NA12749,NA12776,NA19240 esv987912 1 963820 964480 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586137 M 3 0 1 AGRN HuRef esv3584989 1 963826 974172 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9839601,essv9839583,essv9839600,essv9839582,essv9839581,essv9839580,essv9839585,essv9839584,essv9839590,essv9839599,essv9839586,essv9839589,essv9839588,essv9839587,essv9839598,essv9839593,essv9839592,essv9839591,essv9839594,essv9839597,essv9839596,essv9839595,essv9839606,essv9839615,essv9839605,essv9839604,essv9839603,essv9839602,essv9839614,essv9839609,essv9839608,essv9839607,essv9839613,essv9839610,essv9839612,essv9839611,essv9839617,essv9839616,essv9839621,essv9839618,essv9839620,essv9839619 M 2504 42 0 AGRN HG00130,HG00350,HG01277,HG01344,HG01625,HG01626,HG01628,HG01630,HG01985,HG02013,HG02089,HG02134,HG02140,HG02277,HG02285,HG02484,HG02508,HG03224,NA12815,NA12872,NA12874,NA18525,NA18639,NA18640,NA18645,NA18747,NA18749,NA18939,NA18946,NA18957,NA18993,NA19031,NA19149,NA19189,NA19431,NA19438,NA19700,NA19734,NA19922,NA20757,NA21109,NA21113 esv4415 1 963838 964567 CNV loss Wang_et_al_2008 18987735 Sequencing essv26856 M 1 0 1 AGRN YH nsv544937 1 963864 967588 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708455 M 17421 0 1 AGRN dgv18n54 1 963864 973767 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544943,nsv544939,nsv544938,nsv544942 M 17421 0 15 AGRN dgv19n54 1 963864 980460 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544944,nsv544940 M 17421 0 2 AGRN esv2674475 1 963871 964481 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6510320,essv5840741,essv6460718,essv5448884,essv6474371,essv5987847,essv6401814,essv5734294,essv6177663,essv6117995,essv6584245,essv5729992,essv6493518,essv5771704,essv6412237,essv6029294,essv6412469,essv5915311,essv6183968,essv5793300,essv6243124,essv5666985,essv6498080,essv5994815,essv6204902,essv5519265,essv6418029,essv5766055,essv6158394,essv5993590,essv6424714,essv5763678,essv6425065,essv5700942,essv6427750,essv5929362,essv6432453,essv5509723,essv6434262,essv6105732,essv6445789,essv5466613,essv6462535,essv5464919,essv6450578,essv6070502,essv6452440,essv6043080,essv6269485,essv5462103,essv6453590,essv5512746,essv6535245,essv5980381,essv6461709,essv5613816,essv6293236,essv5916857,essv6192230,essv5789270,essv6261205,essv5596252,essv6241223,essv5741053,essv6261633,essv5533171,essv6573154,essv5491037,essv6154985,essv5987883,essv6152898,essv5770283,essv6211448,essv5722499,essv6198018,essv6016807,essv6147838,essv6048979,essv6286261,essv5601728,essv6301862,essv5885429,essv6510454,essv6071729,essv6572780,essv5674953,essv6239917,essv5680961,essv6579614,essv5765836,essv6320707,essv5586667,essv6275093,essv6001928,essv6197707,essv5620395,essv6325568,essv5717079,essv6332345,essv6085598,essv6215092,essv5515175,essv6336428,essv5964725,essv6337876,essv5821062,essv6338714,essv6123918,essv6229256,essv5978321,essv6339703,essv5629256,essv6596508,essv5803925,essv6212079,essv6027655,essv6178153,essv5750218,essv6482402,essv5607932,essv6479044,essv5912544,essv6347242,essv6054853,essv6150676,essv5607185,essv6349109,essv5597778,essv6197367,essv5775808,essv6221043,essv5589591,essv6175781,essv5614201,essv6461713,essv5977948,essv6352021,essv6054536,essv6504358,essv5824591,essv6283772,essv5543982,essv6467904,essv5615962,essv6362474,essv5992380,essv6471857,essv5929634,essv6273537,essv5759307,essv6512480,essv5397305,essv6368059,essv5574524,essv6168761,essv6018657,essv6463649,essv5443079,essv6371427,essv5657075,essv6559100,essv5809115,essv6168477,essv5438152,essv6379238,essv5441289,essv6262010,essv6067524,essv6386003,essv5515257,essv6510298,essv6031648,essv5870935,essv5718506,essv5795116,essv5885638,essv5493240,essv5758458,essv6022508,essv5942233,essv5578565,essv6051709,essv5655999,essv5853566,essv6000145,essv6069837,essv5456064,essv5460067,essv5484641,essv5525377,essv5870748,essv5600714,essv5958628,essv5694805,essv6030509,essv5579307,essv5714107,essv5829646,essv5782186,essv5819196,essv5819882,essv5552270,essv6096713,essv5700798,essv5544079,essv6032236,essv5534660,essv5672078,essv5670392,essv6019519 M 1151 0 210 AGRN HG00108,HG00116,HG00123,HG00124,HG00125,HG00136,HG00137,HG00138,HG00140,HG00146,HG00151,HG00159,HG00160,HG00173,HG00180,HG00185,HG00187,HG00231,HG00237,HG00242,HG00245,HG00246,HG00247,HG00250,HG00251,HG00252,HG00253,HG00268,HG00273,HG00274,HG00275,HG00276,HG00277,HG00280,HG00281,HG00306,HG00310,HG00311,HG00319,HG00323,HG00325,HG00326,HG00327,HG00328,HG00342,HG00345,HG00353,HG00357,HG00361,HG00366,HG00367,HG00375,HG00419,HG00443,HG00449,HG00463,HG00500,HG00534,HG00537,HG00554,HG00565,HG00581,HG00590,HG00607,HG00608,HG00614,HG00640,HG00641,HG00654,HG00693,HG00699,HG00702,HG00708,HG00731,HG00732,HG00734,HG00736,HG00740,HG01047,HG01048,HG01052,HG01061,HG01070,HG01082,HG01124,HG01133,HG01134,HG01148,HG01197,HG01250,HG01334,HG01350,HG01353,HG01354,HG01359,HG01365,HG01366,HG01374,HG01375,HG01389,HG01390,HG01437,HG01456,HG01461,HG01489,HG01518,HG01522,HG01551,NA06984,NA06986,NA06989,NA11830,NA11919,NA11994,NA11995,NA12283,NA12342,NA12348,NA12546,NA12718,NA12763,NA12777,NA12842,NA18530,NA18536,NA18542,NA18545,NA18549,NA18557,NA18565,NA18566,NA18570,NA18571,NA18573,NA18576,NA18577,NA18582,NA18592,NA18610,NA18611,NA18613,NA18616,NA18619,NA18632,NA18856,NA18861,NA18912,NA18947,NA18950,NA18980,NA18987,NA18989,NA18999,NA19003,NA19055,NA19057,NA19075,NA19076,NA19077,NA19078,NA19082,NA19084,NA19197,NA19316,NA19327,NA19347,NA19355,NA19371,NA19375,NA19439,NA19445,NA19451,NA19453,NA19462,NA19463,NA19471,NA19473,NA19648,NA19676,NA19703,NA19707,NA19722,NA19723,NA19780,NA19834,NA19904,NA19982,NA20276,NA20291,NA20346,NA20508,NA20510,NA20513,NA20516,NA20517,NA20525,NA20530,NA20531,NA20532,NA20539,NA20582,NA20585,NA20752,NA20756,NA20766,NA20778,NA20783,NA20796,NA20799,NA20808 dgv20n54 1 963966 964438 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544945,nsv544941,nsv544946 M 17421 0 31 AGRN esv2853792 1 964014 964502 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123359 M 1 0 1 AGRN HuRef esv6517 1 964760 965579 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28958 M 1 0 0 AGRN esv3561092 1 964980 965379 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9759839 M 767 0 1 AGRN nsv1137176 1 965047 965362 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3975866 M 2 0 1 AGRN KWS1 nsv1125446 1 965057 965567 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3983619 M 2 0 0 AGRN KWS2 dgv14e59 1 965089 966987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3385140,esv3441341 M 185 2 0 AGRN NA19239,NA19240 nsv1073573 1 965347 965510 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766181 M 1 0 1 AGRN KWP1 esv1064309 1 965995 965995 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3670093 M 2 1 0 AGRN HuRef nsv1073577 1 968899 969400 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767229 M 1 0 1 AGRN KWP1 nsv1143425 1 976300 976700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980622 M 2 0 1 AGRN KWS1 nsv1074422 1 988571 988623 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767579 M 1 0 1 AGRN KWP1 esv3562203 1 988572 988623 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9760950 M 767 0 1 AGRN nsv829425 1 991422 993857 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434857 M 31 0 1 AGRN NA18942 nsv1133120 1 991818 991894 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987937 M 2 0 0 "" KWS1 nsv1074423 1 1000099 1000900 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771025 M 1 0 1 "" KWP1 nsv1003578 1 1003629 1218086 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466373 M 29084 1 0 B3GALT6,C1orf159,FAM132A,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 nsv544947 1 1005806 1242084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708504 M 17421 0 1 ACAP3,B3GALT6,C1orf159,FAM132A,LOC254099,MIR200A,MIR200B,MIR429,MIR6726,RNF223,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 nsv470680 1 1005806 1314015 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547649,nssv547648,nssv547650 M 443 0 3 ACAP3,AURKAIP1,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 HGDP00661,HGDP00825,HGDP00978 esv25577 1 1011188 1014828 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14645 M 40 1 11 "" NA11993,NA12489,NA12878,NA18502,NA18511,NA18916,NA19099,NA19108,NA19129,NA19147,NA19190,NA19240 esv998069 1 1011248 1014683 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586245 M 3 1 0 "" HuRef dgv21n54 1 1011278 1014403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544948,nsv544949 M 17421 0 2 "" nsv1126165 1 1011700 1012400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984392 M 2 0 1 "" KWS1 nsv544950 1 1012680 1014625 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708508,nssv708507 M 17421 0 2 "" nsv1143426 1 1012700 1014000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980623 M 2 0 1 "" KWS1 nsv1409 1 1030851 1060065 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4677 M 9 1 0 C1orf159 NA19129 dgv15e59 1 1034289 1035387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3385108,esv3352473 M 185 2 0 C1orf159 NA19238,NA19240 esv1010559 1 1034408 1035203 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586664 M 3 1 0 C1orf159 HuRef esv23529 1 1034408 1035203 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10745 M 40 24 0 C1orf159 NA06985,NA12414,NA12749,NA12776,NA12828,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 nsv544951 1 1034431 1035132 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708510,nssv708513,nssv708509,nssv708512,nssv708511 M 17421 5 0 C1orf159 nsv1146879 1 1034891 1034941 CNV insertion John_et_al_2014 26484159 Sequencing nssv3998243 M 1 1 0 C1orf159 KWB1 esv1281251 1 1035015 1035015 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4028372 M 2 1 0 C1orf159 HuRef nsv1137716 1 1035031 1035110 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990217 M 2 0 1 C1orf159 KWS2 nsv1119654 1 1041111 1069313 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982098 M 2 0 1 C1orf159 KWS1 nsv950452 1 1042301 1572900 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997159 M 1 0 1 ACAP3,ANKRD65,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf233,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC254099,MIB2,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,MIR6808,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SSU72,TAS1R3,TMEM240,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 BILGI_BIOE nsv160439 1 1044215 1044525 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179017 M 24 C1orf159 nsv1126166 1 1050900 1052800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984393 M 2 0 1 C1orf159 KWS1 esv32594 1 1051688 1051826 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv92767,essv96399 M 51 0 2 C1orf159 21944,22371 esv3565536 1 1058898 1058978 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9764283 M 767 0 1 "" nsv160193 1 1058914 1058993 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178771 M 24 "" esv3429749 1 1069832 1070259 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652034 M 185 1 0 "" NA19240 nsv1129451 1 1070128 1070186 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3962904 M 2 0 0 "" KWS1 esv2630187 1 1073076 1076966 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5357752 M 1 0 1 LOC254099 NA18507 esv26506 1 1074379 1076117 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13049 M 40 17 0 LOC254099 NA11894,NA12287,NA12414,NA12489,NA12749,NA15510,NA18502,NA18508,NA18517,NA18858,NA18861,NA18909,NA19099,NA19129,NA19147,NA19225,NA19257 nsv544953 1 1074524 1075878 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708515 M 17421 0 1 LOC254099 dgv22n54 1 1074524 1075980 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544955,nsv544952 M 17421 2 0 LOC254099 nsv544954 1 1074624 1121794 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708516 M 17421 0 1 LOC254099,MIR200A,MIR200B,MIR429,TTLL10 nsv161017 1 1075907 1076089 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179595 M 24 LOC254099 nsv1126167 1 1076300 1077000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984394 M 2 0 1 LOC254099 KWS1 nsv1074960 1 1076399 1077000 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3768187 M 1 0 1 LOC254099 KWP1 nsv469848 1 1081462 1257615 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1672244,nssv1674154,nssv1674008,nssv1672307,nssv1675926,nssv1675619,nssv1675327,nssv1674115,nssv1675776,nssv1676084,nssv1676561,nssv1673518,nssv1674135,nssv1672626,nssv1672854,nssv1675455,nssv1675739,nssv1672738,nssv1674359,nssv1675676,nssv1674285,nssv1672390,nssv1672249,nssv1673798,nssv1672366,nssv1674068,nssv1672094,nssv1673131,nssv1676085,nssv1675837,nssv1672396,nssv1674548,nssv1673139,nssv1673733,nssv1675128,nssv1673267,nssv1676489,nssv1672102,nssv1676113,nssv1673413,nssv1674296,nssv1676596,nssv1676397,nssv1674019,nssv1673850,nssv1674236,nssv1672467,nssv1674168,nssv1673022,nssv1675314,nssv1673400,nssv1675092,nssv1674020,nssv1672602,nssv1673566,nssv1676663,nssv1675446,nssv1675375 M 265 58 0 ACAP3,B3GALT6,CPSF3L,FAM132A,MIR200A,MIR200B,MIR429,MIR6726,MIR6727,PUSL1,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 esv2661109 1 1082524 1082740 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5709461,essv6421375,essv5505211,essv5914448,essv5486707,essv6472005,essv5558210,essv6109554,essv5439413,essv6174128,essv5752766,essv5909645,essv5620762,essv6113329,essv5855617,essv6539385,essv6312301 M 1151 0 17 "" NA18499,NA18501,NA18502,NA18909,NA19099,NA19257,NA19360,NA19381,NA19382,NA19397,NA19403,NA19428,NA19439,NA19457,NA19704,NA19819,NA19920 esv2524046 1 1083767 1088804 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5287439 M 1 0 1 "" NA18507 esv2587289 1 1084823 1090940 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5220272 M 1 0 1 "" NA18507 esv2317109 1 1086650 1087181 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4717325 M 1 0 1 "" NA18507 esv2658760 1 1086817 1087023 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5758836,essv6397614,essv5623466,essv6213083,essv5547316,essv6120409,essv5541179,essv6096407,essv5436201,essv6073157,essv5524307,essv5802239,essv5562204,essv6530899,essv5594183,essv6191112,essv5641794,essv6285851,essv5458632,essv6034389,essv5721563,essv6552168,essv5459848,essv6441748,essv5511013,essv5789536,essv5681798,essv5956005,essv5636104,essv5930632,essv5551811,essv6005063,essv5752437,essv6112738,essv5747770,essv5898145,essv5543990,essv5850006,essv5605063,essv6154341,essv5458106,essv6312211,essv5726655,essv5991720,essv5706693,essv6031457,essv5667785,essv5832949,essv5437205,essv6246174,essv5474265,essv6322689,essv5556663,essv6079984,essv6593567,essv6205532,essv6584683,essv6330566,essv6590372,essv5964072,essv6580572,essv5990107,essv6108284,essv5979653,essv6472528,essv6109219,essv6185848,essv5950181,essv5967220,essv6352878,essv6500540,essv5957822,essv6175521,essv6151097,essv6170234,essv6218597,essv6362912,essv6364011,essv6558511,essv6056921,essv6504951,essv6549704,essv5787568,essv6046705 M 1151 0 84 "" HG01098,HG01108,HG01171,HG01350,HG01360,HG01462,HG01497,NA11918,NA11992,NA18486,NA18488,NA18498,NA18501,NA18502,NA18504,NA18507,NA18520,NA18522,NA18853,NA18858,NA18861,NA18867,NA18907,NA18908,NA18909,NA18917,NA18933,NA19092,NA19093,NA19099,NA19116,NA19138,NA19144,NA19153,NA19172,NA19190,NA19198,NA19223,NA19225,NA19247,NA19248,NA19313,NA19315,NA19317,NA19319,NA19321,NA19328,NA19347,NA19359,NA19372,NA19373,NA19375,NA19376,NA19377,NA19379,NA19381,NA19382,NA19384,NA19385,NA19390,NA19393,NA19394,NA19397,NA19399,NA19403,NA19443,NA19453,NA19466,NA19474,NA19704,NA19716,NA19758,NA19818,NA19819,NA19835,NA19900,NA19920,NA20278,NA20294,NA20296,NA20299,NA20322,NA20332,NA20336 nsv509257 1 1087335 1124850 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619760 M 4 1 0 MIR200A,MIR200B,MIR429,TTLL10 NA10860 nsv544956 1 1106473 1176597 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708518 M 17421 0 1 B3GALT6,SDF4,TNFRSF18,TNFRSF4,TTLL10 nsv829536 1 1112147 1113089 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436321 M 31 1 0 TTLL10 NA18542 esv3335892 1 1119989 1120387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691755 M 185 1 0 TTLL10 NA19238 nsv1110655 1 1127783 1127852 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3960310 M 2 1 0 TTLL10 KWS1 esv24081 1 1137003 1138283 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14081 M 40 8 0 "" NA18511,NA18523,NA18861,NA18907,NA18909,NA19099,NA19147,NA19190 nsv544957 1 1137126 1137653 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708519 M 17421 0 1 "" esv3341957 1 1137189 1137987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691757 M 185 1 0 "" NA19239 dgv23n54 1 1137440 1138111 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544959,nsv544958 M 17421 2 0 "" nsv544960 1 1139416 1142862 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708522 M 17421 0 1 TNFRSF18 dgv24n54 1 1140435 1148895 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544962,nsv544961 M 17421 0 2 TNFRSF18,TNFRSF4 nsv544963 1 1142325 1149661 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708525 M 17421 0 1 TNFRSF4 esv9332 1 1142503 1143267 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31773 M 1 0 0 "" esv3566647 1 1142700 1143161 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9765394 M 767 0 1 "" esv3584990 1 1142714 1143140 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840333,essv9840332,essv9840334,essv9840335,essv9839671,essv9840337,essv9840331,essv9840340,essv9840339,essv9840336,essv9840338,essv9839670,essv9839669,essv9839668,essv9839667,essv9839666,essv9839632,essv9839665,essv9839631,essv9839622,essv9839625,essv9839630,essv9839624,essv9839623,essv9839629,essv9839626,essv9839628,essv9839627,essv9839647,essv9839638,essv9839664,essv9839637,essv9839634,essv9839633,essv9839636,essv9839635,essv9839641,essv9839646,essv9839640,essv9839639,essv9839642,essv9839645,essv9839644,essv9839643,essv9839649,essv9839663,essv9839654,essv9839648,essv9839653,essv9839650,essv9839652,essv9839651,essv9839655,essv9839657,essv9839662,essv9839656,essv9839658,essv9839661,essv9839660,essv9839659,essv9839912,essv9840328,essv9839783,essv9840343,essv9840346,essv9839718,essv9840345,essv9840344,essv9840170,essv9839961,essv9839685,essv9840342,essv9840329,essv9840341,essv9839678,essv9839683,essv9839684,essv9839677,essv9839673,essv9839672,essv9839676,essv9839674,essv9839675,essv9840330,essv9839682,essv9839679,essv9839681,essv9839680,essv9839691,essv9839717,essv9839700,essv9839687,essv9839690,essv9839686,essv9839689,essv9839688,essv9839694,essv9839699,essv9839693,essv9839692,essv9839698,essv9839695,essv9839697,essv9839696,essv9839707,essv9839702,essv9839716,essv9839701,essv9839706,essv9839703,essv9839705,essv9839704,essv9839710,essv9839715,essv9839709,essv9839708,essv9839714,essv9839711,essv9839713,essv9839712,essv9839723,essv9839782,essv9839732,essv9839749,essv9839722,essv9839721,essv9839720,essv9839719,essv9839726,essv9839731,essv9839725,essv9839724,essv9839730,essv9839727,essv9839729,essv9839728,essv9839734,essv9839748,essv9839739,essv9839733,essv9839738,essv9839735,essv9839737,essv9839736,essv9839742,essv9839747,essv9839741,essv9839740,essv9839746,essv9839743,essv9839745,essv9839744,essv9839764,essv9839755,essv9839781,essv9839754,essv9839751,essv9839750,essv9839753,essv9839752,essv9839758,essv9839763,essv9839757,essv9839756,essv9839759,essv9839762,essv9839761,essv9839760,essv9839780,essv9839771,essv9839766,essv9839765,essv9839770,essv9839767,essv9839769,essv9839768,essv9839774,essv9839779,essv9839773,essv9839772,essv9839775,essv9839778,essv9839777,essv9839776,essv9839796,essv9839787,essv9839813,essv9839846,essv9839911,essv9839786,essv9839785,essv9839784,essv9839795,essv9839790,essv9839788,essv9839789,essv9839791,essv9839794,essv9839793,essv9839792,essv9839798,essv9839812,essv9839803,essv9839797,essv9839802,essv9839799,essv9839801,essv9839800,essv9839811,essv9839806,essv9839805,essv9839804,essv9839807,essv9839810,essv9839809,essv9839808,essv9839828,essv9839819,essv9839845,essv9839815,essv9839818,essv9839814,essv9839817,essv9839816,essv9839827,essv9839822,essv9839821,essv9839820,essv9839823,essv9839826,essv9839825,essv9839824,essv9839835,essv9839830,essv9839829,essv9839844,essv9839834,essv9839831,essv9839833,essv9839832,essv9839843,essv9839838,essv9839837,essv9839836,essv9839839,essv9839842,essv9839841,essv9839840,essv9839851,essv9839860,essv9839910,essv9839877,essv9839850,essv9839847,essv9839849,essv9839848,essv9839859,essv9839854,essv9839853,essv9839852,essv9839858,essv9839855,essv9839857,essv9839856,essv9839876,essv9839867,essv9839862,essv9839861,essv9839863,essv9839866,essv9839865,essv9839864,essv9839870,essv9839875,essv9839869,essv9839868,essv9839871,essv9839874,essv9839873,essv9839872,essv9839883,essv9839880,essv9839892,essv9839879,essv9839878,essv9839909,essv9839882,essv9839881,essv9839886,essv9839891,essv9839885,essv9839884,essv9839887,essv9839890,essv9839889,essv9839888,essv9839899,essv9839894,essv9839893,essv9839908,essv9839898,essv9839895,essv9839897,essv9839896,essv9839900,essv9839907,essv9839902,essv9839901,essv9839903,essv9839906,essv9839905,essv9839904,essv9839960,essv9839959,essv9840040,essv9839975,essv9840169,essv9839915,essv9839913,essv9839958,essv9839938,essv9839921,essv9839914,essv9839920,essv9839916,essv9839919,essv9839918,essv9839917,essv9839937,essv9839928,essv9839923,essv9839922,essv9839927,essv9839924,essv9839926,essv9839925,essv9839936,essv9839931,essv9839930,essv9839929,essv9839932,essv9839935,essv9839934,essv9839933,essv9839943,essv9839957,essv9839952,essv9839974,essv9839939,essv9839942,essv9839941,essv9839940,essv9839946,essv9839951,essv9839945,essv9839944,essv9839947,essv9839950,essv9839949,essv9839948,essv9839956,essv9839973,essv9839964,essv9839955,essv9839963,essv9839954,essv9839953,essv9839962,essv9839967,essv9839972,essv9839966,essv9839965,essv9839968,essv9839971,essv9839970,essv9839969,essv9840006,essv9839989,essv9839980,essv9840039,essv9839979,essv9839978,essv9839977,essv9839976,essv9839983,essv9839988,essv9839982,essv9839981,essv9839987,essv9839984,essv9839986,essv9839985,essv9839991,essv9839996,essv9840005,essv9839990,essv9839992,essv9839995,essv9839994,essv9839993,essv9839999,essv9840004,essv9839998,essv9839997,essv9840003,essv9840000,essv9840002,essv9840001,essv9840012,essv9840021,essv9840038,essv9840011,essv9840007,essv9840008,essv9840010,essv9840009,essv9840015,essv9840020,essv9840014,essv9840013,essv9840016,essv9840019,essv9840018,essv9840017,essv9840023,essv9840037,essv9840028,essv9840022,essv9840027,essv9840024,essv9840026,essv9840025,essv9840031,essv9840036,essv9840030,essv9840029,essv9840032,essv9840035,essv9840034,essv9840033,essv9840168,essv9840053,essv9840042,essv9840070,essv9840103,essv9840041,essv9840052,essv9840044,essv9840047,essv9840043,essv9840046,essv9840045,essv9840048,essv9840051,essv9840050,essv9840049,essv9840055,essv9840060,essv9840054,essv9840069,essv9840059,essv9840056,essv9840058,essv9840057,essv9840063,essv9840068,essv9840062,essv9840061,essv9840064,essv9840067,essv9840066,essv9840065,essv9840076,essv9840085,essv9840102,essv9840075,essv9840071,essv9840072,essv9840074,essv9840073,essv9840079,essv9840084,essv9840078,essv9840077,essv9840080,essv9840083,essv9840082,essv9840081,essv9840092,essv9840087,essv9840101,essv9840086,essv9840091,essv9840088,essv9840090,essv9840089,essv9840095,essv9840100,essv9840094,essv9840093,essv9840096,essv9840099,essv9840098,essv9840097,essv9840117,essv9840108,essv9840167,essv9840134,essv9840104,essv9840107,essv9840106,essv9840105,essv9840111,essv9840116,essv9840110,essv9840109,essv9840115,essv9840112,essv9840114,essv9840113,essv9840124,essv9840119,essv9840118,essv9840133,essv9840123,essv9840120,essv9840122,essv9840121,essv9840127,essv9840132,essv9840125,essv9840126,essv9840131,essv9840128,essv9840130,essv9840129,essv9840140,essv9840135,essv9840149,essv9840166,essv9840139,essv9840136,essv9840138,essv9840137,essv9840143,essv9840148,essv9840142,essv9840141,essv9840144,essv9840147,essv9840146,essv9840145,essv9840165,essv9840156,essv9840151,essv9840150,essv9840155,essv9840152,essv9840154,essv9840153,essv9840157,essv9840159,essv9840164,essv9840158,essv9840163,essv9840160,essv9840162,essv9840161,essv9840326,essv9840228,essv9840293,essv9840195,essv9840178,essv9840347,essv9840327,essv9840177,essv9840176,essv9840173,essv9840444,essv9840172,essv9840171,essv9840175,essv9840174,essv9840180,essv9840185,essv9840179,essv9840194,essv9840181,essv9840184,essv9840183,essv9840182,essv9840188,essv9840193,essv9840187,essv9840186,essv9840192,essv9840189,essv9840191,essv9840190,essv9840196,essv9840201,essv9840227,essv9840210,essv9840197,essv9840200,essv9840199,essv9840198,essv9840209,essv9840204,essv9840203,essv9840202,essv9840205,essv9840208,essv9840207,essv9840206,essv9840212,essv9840217,essv9840211,essv9840226,essv9840213,essv9840216,essv9840215,essv9840214,essv9840220,essv9840225,essv9840218,essv9840219,essv9840221,essv9840224,essv9840223,essv9840222,essv9840292,essv9840242,essv9840230,essv9840233,essv9840229,essv9840232,essv9840231,essv9840259,essv9840241,essv9840236,essv9840235,essv9840234,essv9840240,essv9840237,essv9840239,essv9840238,essv9840243,essv9840258,essv9840244,essv9840249,essv9840248,essv9840245,essv9840247,essv9840246,essv9840252,essv9840257,essv9840251,essv9840250,essv9840253,essv9840256,essv9840255,essv9840254,essv9840274,essv9840265,essv9840261,essv9840260,essv9840291,essv9840264,essv9840263,essv9840262,essv9840266,essv9840273,essv9840268,essv9840267,essv9840269,essv9840272,essv9840270,essv9840271,essv9840276,essv9840290,essv9840281,essv9840275,essv9840280,essv9840277,essv9840279,essv9840278,essv9840289,essv9840284,essv9840282,essv9840283,essv9840288,essv9840286,essv9840285,essv9840287,essv9840324,essv9840321,essv9840325,essv9840378,essv9840443,essv9840304,essv9840303,essv9840294,essv9840298,essv9840295,essv9840297,essv9840296,essv9840299,essv9840302,essv9840301,essv9840300,essv9840311,essv9840306,essv9840320,essv9840305,essv9840307,essv9840310,essv9840309,essv9840308,essv9840314,essv9840319,essv9840312,essv9840313,essv9840318,essv9840315,essv9840316,essv9840317,essv9840351,essv9840322,essv9840348,essv9840323,essv9840360,essv9840377,essv9840350,essv9840349,essv9840354,essv9840359,essv9840353,essv9840352,essv9840358,essv9840355,essv9840357,essv9840356,essv9840367,essv9840363,essv9840376,essv9840362,essv9840361,essv9840366,essv9840364,essv9840365,essv9840375,essv9840370,essv9840368,essv9840369,essv9840371,essv9840374,essv9840373,essv9840372,essv9840409,essv9840383,essv9840392,essv9840442,essv9840382,essv9840381,essv9840380,essv9840379,essv9840386,essv9840384,essv9840391,essv9840385,essv9840390,essv9840387,essv9840389,essv9840388,essv9840394,essv9840399,essv9840408,essv9840393,essv9840398,essv9840395,essv9840397,essv9840396,essv9840400,essv9840402,essv9840407,essv9840401,essv9840403,essv9840406,essv9840405,essv9840404,essv9840410,essv9840441,essv9840415,essv9840424,essv9840411,essv9840414,essv9840413,essv9840412,essv9840418,essv9840423,essv9840417,essv9840416,essv9840422,essv9840419,essv9840421,essv9840420,essv9840431,essv9840426,essv9840440,essv9840425,essv9840430,essv9840427,essv9840429,essv9840428,essv9840434,essv9840432,essv9840439,essv9840433,essv9840435,essv9840438,essv9840437,essv9840436,essv9840473,essv9840447,essv9840456,essv9840446,essv9840506,essv9840445,essv9840449,essv9840448,essv9840451,essv9840455,essv9840450,essv9840454,essv9840453,essv9840452,essv9840458,essv9840472,essv9840457,essv9840463,essv9840462,essv9840459,essv9840461,essv9840460,essv9840471,essv9840466,essv9840465,essv9840464,essv9840470,essv9840467,essv9840469,essv9840468,essv9840474,essv9840479,essv9840488,essv9840505,essv9840475,essv9840478,essv9840477,essv9840476,essv9840482,essv9840487,essv9840481,essv9840480,essv9840486,essv9840483,essv9840485,essv9840484,essv9840495,essv9840490,essv9840489,essv9840504,essv9840494,essv9840491,essv9840493,essv9840492,essv9840498,essv9840503,essv9840497,essv9840496,essv9840499,essv9840502,essv9840501,essv9840500,essv9840520,essv9840511,essv9840510,essv9840507,essv9840537,essv9840509,essv9840508,essv9840514,essv9840519,essv9840513,essv9840512,essv9840518,essv9840515,essv9840517,essv9840516,essv9840522,essv9840527,essv9840536,essv9840521,essv9840526,essv9840523,essv9840525,essv9840524,essv9840528,essv9840530,essv9840529,essv9840535,essv9840531,essv9840534,essv9840533,essv9840532,essv9840538,essv9840539,essv9840540 M 2504 0 919 "" HG00111,HG00115,HG00116,HG00118,HG00120,HG00128,HG00130,HG00136,HG00141,HG00143,HG00151,HG00154,HG00158,HG00179,HG00182,HG00190,HG00234,HG00236,HG00246,HG00250,HG00253,HG00258,HG00262,HG00264,HG00266,HG00267,HG00269,HG00275,HG00290,HG00306,HG00313,HG00315,HG00318,HG00328,HG00335,HG00338,HG00346,HG00353,HG00358,HG00362,HG00364,HG00366,HG00373,HG00384,HG00403,HG00404,HG00407,HG00409,HG00410,HG00419,HG00421,HG00422,HG00428,HG00436,HG00437,HG00442,HG00443,HG00445,HG00446,HG00448,HG00451,HG00452,HG00457,HG00458,HG00463,HG00464,HG00472,HG00475,HG00476,HG00478,HG00479,HG00500,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00551,HG00556,HG00557,HG00559,HG00560,HG00566,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00595,HG00599,HG00608,HG00610,HG00611,HG00613,HG00619,HG00620,HG00622,HG00623,HG00626,HG00628,HG00629,HG00631,HG00632,HG00634,HG00650,HG00651,HG00653,HG00662,HG00671,HG00672,HG00674,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00707,HG00708,HG00717,HG00728,HG00729,HG00740,HG00759,HG00766,HG00844,HG00851,HG00864,HG00879,HG00881,HG00956,HG00978,HG00982,HG01028,HG01029,HG01031,HG01047,HG01048,HG01054,HG01055,HG01058,HG01063,HG01064,HG01066,HG01069,HG01070,HG01079,HG01080,HG01083,HG01086,HG01104,HG01110,HG01111,HG01122,HG01124,HG01125,HG01136,HG01139,HG01148,HG01167,HG01171,HG01174,HG01176,HG01177,HG01182,HG01187,HG01191,HG01200,HG01204,HG01205,HG01247,HG01250,HG01251,HG01253,HG01254,HG01257,HG01259,HG01260,HG01272,HG01275,HG01277,HG01302,HG01305,HG01311,HG01341,HG01348,HG01351,HG01354,HG01356,HG01357,HG01359,HG01362,HG01369,HG01377,HG01378,HG01393,HG01402,HG01405,HG01413,HG01432,HG01435,HG01437,HG01440,HG01444,HG01447,HG01456,HG01459,HG01462,HG01464,HG01488,HG01489,HG01491,HG01492,HG01494,HG01495,HG01497,HG01519,HG01528,HG01536,HG01550,HG01556,HG01571,HG01572,HG01578,HG01597,HG01598,HG01599,HG01600,HG01603,HG01605,HG01612,HG01613,HG01686,HG01700,HG01702,HG01705,HG01710,HG01757,HG01761,HG01768,HG01770,HG01773,HG01786,HG01794,HG01795,HG01796,HG01797,HG01798,HG01799,HG01801,HG01802,HG01804,HG01806,HG01807,HG01808,HG01809,HG01810,HG01811,HG01812,HG01813,HG01815,HG01817,HG01840,HG01841,HG01843,HG01844,HG01845,HG01847,HG01848,HG01849,HG01850,HG01851,HG01852,HG01853,HG01855,HG01857,HG01858,HG01860,HG01861,HG01862,HG01863,HG01864,HG01865,HG01866,HG01867,HG01868,HG01869,HG01870,HG01871,HG01872,HG01873,HG01874,HG01878,HG01879,HG01892,HG01893,HG01917,HG01918,HG01920,HG01921,HG01923,HG01924,HG01926,HG01927,HG01935,HG01938,HG01939,HG01941,HG01942,HG01944,HG01945,HG01947,HG01948,HG01950,HG01951,HG01953,HG01961,HG01967,HG01968,HG01970,HG01971,HG01973,HG01974,HG01977,HG01979,HG01980,HG01982,HG01991,HG01992,HG01997,HG02002,HG02003,HG02008,HG02016,HG02017,HG02023,HG02025,HG02026,HG02029,HG02031,HG02032,HG02035,HG02040,HG02047,HG02048,HG02050,HG02057,HG02058,HG02060,HG02061,HG02064,HG02069,HG02070,HG02072,HG02073,HG02075,HG02076,HG02078,HG02079,HG02081,HG02082,HG02084,HG02085,HG02086,HG02087,HG02088,HG02102,HG02104,HG02105,HG02113,HG02116,HG02121,HG02122,HG02133,HG02136,HG02139,HG02141,HG02142,HG02146,HG02147,HG02150,HG02151,HG02152,HG02153,HG02154,HG02155,HG02156,HG02164,HG02165,HG02166,HG02178,HG02179,HG02180,HG02181,HG02182,HG02184,HG02186,HG02187,HG02188,HG02190,HG02215,HG02223,HG02232,HG02238,HG02250,HG02252,HG02259,HG02262,HG02265,HG02266,HG02271,HG02272,HG02274,HG02275,HG02277,HG02278,HG02283,HG02286,HG02291,HG02292,HG02298,HG02299,HG02301,HG02304,HG02312,HG02348,HG02351,HG02353,HG02355,HG02356,HG02360,HG02364,HG02367,HG02371,HG02373,HG02375,HG02379,HG02380,HG02382,HG02383,HG02384,HG02385,HG02386,HG02389,HG02390,HG02391,HG02392,HG02395,HG02396,HG02397,HG02398,HG02399,HG02401,HG02402,HG02406,HG02407,HG02409,HG02410,HG02420,HG02425,HG02429,HG02450,HG02470,HG02479,HG02490,HG02491,HG02494,HG02502,HG02512,HG02513,HG02521,HG02522,HG02603,HG02649,HG02654,HG02661,HG02682,HG02685,HG02690,HG02696,HG02699,HG02727,HG02728,HG02734,HG02783,HG02790,HG03007,HG03009,HG03012,HG03019,HG03096,HG03235,HG03437,HG03490,HG03557,HG03589,HG03593,HG03598,HG03600,HG03604,HG03607,HG03619,HG03624,HG03625,HG03629,HG03631,HG03634,HG03640,HG03644,HG03645,HG03646,HG03663,HG03681,HG03686,HG03689,HG03690,HG03692,HG03695,HG03696,HG03698,HG03703,HG03706,HG03708,HG03711,HG03716,HG03718,HG03729,HG03733,HG03738,HG03743,HG03745,HG03755,HG03757,HG03762,HG03767,HG03773,HG03778,HG03784,HG03785,HG03789,HG03793,HG03796,HG03800,HG03802,HG03803,HG03805,HG03808,HG03812,HG03814,HG03815,HG03826,HG03832,HG03838,HG03844,HG03851,HG03858,HG03862,HG03864,HG03866,HG03873,HG03874,HG03886,HG03890,HG03895,HG03899,HG03911,HG03913,HG03916,HG03928,HG03931,HG03940,HG03943,HG03949,HG03955,HG03960,HG03965,HG03967,HG03969,HG03973,HG03976,HG03977,HG03985,HG03989,HG03998,HG03999,HG04001,HG04017,HG04020,HG04026,HG04029,HG04033,HG04047,HG04061,HG04062,HG04063,HG04076,HG04090,HG04094,HG04099,HG04131,HG04144,HG04152,HG04153,HG04156,HG04158,HG04161,HG04162,HG04164,HG04189,HG04194,HG04200,HG04202,HG04206,HG04209,HG04222,HG04225,HG04235,NA06985,NA06994,NA07048,NA07056,NA11843,NA11894,NA11918,NA12005,NA12043,NA12144,NA12155,NA12249,NA12273,NA12283,NA12286,NA12341,NA12383,NA12413,NA12718,NA12749,NA12760,NA12828,NA12829,NA12830,NA12874,NA12889,NA18525,NA18526,NA18528,NA18530,NA18531,NA18533,NA18534,NA18536,NA18537,NA18538,NA18539,NA18541,NA18543,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18553,NA18555,NA18558,NA18559,NA18560,NA18566,NA18571,NA18573,NA18577,NA18579,NA18582,NA18591,NA18592,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18608,NA18609,NA18611,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18621,NA18623,NA18625,NA18627,NA18628,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18638,NA18639,NA18641,NA18642,NA18643,NA18644,NA18646,NA18647,NA18648,NA18740,NA18747,NA18748,NA18749,NA18757,NA18874,NA18910,NA18934,NA18940,NA18941,NA18942,NA18943,NA18944,NA18946,NA18947,NA18949,NA18950,NA18951,NA18953,NA18954,NA18957,NA18959,NA18960,NA18961,NA18962,NA18963,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18978,NA18981,NA18982,NA18983,NA18984,NA18985,NA18986,NA18987,NA18989,NA18990,NA18991,NA18992,NA18993,NA18994,NA18997,NA18998,NA18999,NA19000,NA19001,NA19002,NA19004,NA19005,NA19006,NA19009,NA19010,NA19011,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19060,NA19063,NA19064,NA19065,NA19066,NA19067,NA19070,NA19072,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19082,NA19083,NA19084,NA19085,NA19086,NA19087,NA19088,NA19091,NA19443,NA19649,NA19652,NA19654,NA19655,NA19657,NA19658,NA19663,NA19664,NA19676,NA19679,NA19681,NA19682,NA19684,NA19719,NA19722,NA19728,NA19731,NA19732,NA19734,NA19735,NA19741,NA19746,NA19747,NA19749,NA19750,NA19755,NA19758,NA19759,NA19762,NA19764,NA19770,NA19773,NA19776,NA19780,NA19785,NA19788,NA19789,NA19794,NA19900,NA20127,NA20278,NA20299,NA20314,NA20317,NA20318,NA20412,NA20507,NA20510,NA20518,NA20529,NA20582,NA20585,NA20589,NA20767,NA20770,NA20783,NA20786,NA20792,NA20795,NA20796,NA20798,NA20804,NA20807,NA20809,NA20812,NA20818,NA20819,NA20822,NA20832,NA20847,NA20852,NA20854,NA20864,NA20866,NA20867,NA20869,NA20870,NA20872,NA20881,NA20887,NA20890,NA20892,NA20895,NA20897,NA20899,NA20904,NA20908,NA20911,NA21088,NA21089,NA21097,NA21098,NA21102,NA21105,NA21110,NA21111,NA21114,NA21119,NA21128,NA21130,NA21133,NA21141 nsv1069687 1 1142718 1143140 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766358 M 1 0 1 "" KWP1 dgv9n106 1 1142719 1143140 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1121063,nsv1134959 M 2 0 1 "" KWS2 esv2673981 1 1142719 1143140 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6381288,essv6114438,essv6386945,essv5746960,essv6390017,essv5999100,essv6392240,essv5812347,essv6151804,essv5748924,essv6241074,essv5509795,essv6498297,essv5711626,essv6396639,essv5874172,essv6396964,essv5910221,essv6400391,essv5836591,essv6118569,essv5490777,essv6480469,essv5938197,essv6286183,essv5615034,essv6406899,essv5883227,essv6409217,essv5471503,essv6414527,essv5796220,essv6414667,essv5545854,essv6414705,essv5420730,essv6488935,essv5618107,essv6420303,essv5398394,essv6177899,essv5795930,essv6226006,essv5577522,essv6560586,essv5740683,essv6424641,essv5910672,essv6426568,essv5817051,essv6428860,essv5757575,essv6217750,essv5471121,essv6174159,essv5615341,essv6434770,essv5660197,essv6144046,essv5888259,essv6437150,essv6013025,essv6437407,essv5431171,essv6460089,essv5944582,essv6438293,essv5919286,essv6553343,essv5565444,essv6439682,essv5732879,essv6457377,essv5706433,essv6204433,essv5568792,essv6567171,essv6001694,essv6223357,essv5898963,essv6181789,essv5885998,essv6445344,essv5974899,essv6199767,essv5657226,essv6188254,essv5883717,essv6446815,essv5713207,essv6447551,essv6101258,essv6448880,essv5468369,essv6529541,essv5594683,essv6456001,essv5633920,essv6220846,essv5411481,essv6578498,essv5830102,essv6583114,essv5648964,essv6561033,essv5496511,essv6582863,essv6045437,essv6234077,essv5663198,essv6280172,essv5578606,essv6260022,essv5887860,essv6532865,essv5467001,essv6300674,essv5469789,essv6564758,essv6101279,essv6591878,essv5859573,essv6539319,essv5863471,essv6315900,essv5726618,essv6522474,essv5513375,essv6163227,essv5843050,essv6538666,essv6083679,essv6275996,essv5499361,essv6252430,essv5914728,essv6278709,essv5867308,essv6237721,essv5578554,essv6320340,essv5948251,essv6320910,essv5498166,essv6553185,essv5752385,essv6258016,essv6056766,essv6276421,essv5517797,essv6463915,essv5702989,essv6325266,essv5426116,essv6194663,essv6025649,essv6327643,essv5652419,essv6502810,essv5496017,essv6158659,essv5616664,essv6335967,essv5978628,essv6336469,essv5941008,essv6244536,essv5885018,essv6228976,essv5471360,essv6339144,essv5783493,essv6173656,essv5793601,essv6265257,essv5424544,essv6341849,essv5456664,essv6537251,essv5583578,essv6128686,essv5750987,essv6220496,essv5518716,essv6538355,essv5985350,essv6215106,essv6051065,essv6557644,essv6074043,essv6295641,essv5971444,essv6207338,essv5832123,essv6349629,essv6001217,essv6350182,essv5535991,essv6243422,essv5721341,essv6351628,essv5817920,essv6352121,essv5674877,essv6354596,essv6104290,essv6458867,essv5933284,essv6224800,essv5887466,essv6359108,essv5977635,essv6524753,essv5434081,essv6360631,essv5742494,essv6471445,essv5467091,essv6474836,essv5941170,essv6363574,essv5429106,essv6364636,essv5615345,essv6513521,essv5623261,essv6542299,essv5602057,essv6538862,essv5950163,essv6262209,essv6067469,essv6531799,essv5945444,essv6208875,essv5703075,essv6460871,essv5903725,essv6368218,essv6100913,essv6368260,essv5465256,essv6278188,essv5804443,essv6123419,essv5503996,essv6205811,essv5459892,essv6146097,essv5995640,essv6256029,essv5656577,essv6262943,essv6101186,essv6375782,essv5973645,essv6493220,essv5488749,essv6377477,essv6021886,essv6226909,essv5845678,essv6580334,essv5841447,essv6143825,essv5655953,essv6149675,essv5638447,essv6231889,essv5790385,essv5548255,essv6014100,essv5410354,essv5909372,essv5834192,essv5479749,essv5492773,essv5904698,essv6026203,essv5470790,essv5901085,essv5577785,essv5644417,essv5864128,essv5922588,essv5738934,essv5607310,essv5491686,essv5751448,essv5803129,essv5733303,essv5649812,essv5746061,essv5514109,essv5479850,essv5596504,essv5850739,essv5616249,essv5936962,essv5938008,essv6064219,essv5525837,essv5559627,essv5828027,essv6063198,essv5407641,essv5517206,essv5973359,essv5825826,essv5515576,essv5905120,essv5559069,essv5991660,essv5834705 M 1151 0 314 "" HG00111,HG00115,HG00136,HG00143,HG00152,HG00158,HG00190,HG00236,HG00246,HG00250,HG00253,HG00258,HG00269,HG00275,HG00313,HG00315,HG00318,HG00328,HG00335,HG00338,HG00346,HG00353,HG00373,HG00403,HG00404,HG00418,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00556,HG00557,HG00559,HG00560,HG00566,HG00577,HG00578,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00595,HG00596,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00620,HG00625,HG00626,HG00628,HG00629,HG00634,HG00635,HG00650,HG00651,HG00653,HG00662,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00704,HG00707,HG00708,HG00740,HG01047,HG01048,HG01055,HG01066,HG01069,HG01070,HG01079,HG01083,HG01124,HG01125,HG01136,HG01171,HG01174,HG01187,HG01204,HG01250,HG01251,HG01351,HG01354,HG01356,HG01357,HG01359,HG01440,HG01456,HG01462,HG01488,HG01489,HG01491,HG01492,HG01494,HG01550,NA07048,NA07056,NA07346,NA11843,NA11894,NA11918,NA12155,NA12249,NA12283,NA12286,NA12413,NA12718,NA12828,NA12829,NA12889,NA18526,NA18530,NA18534,NA18536,NA18537,NA18538,NA18539,NA18541,NA18543,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18553,NA18555,NA18558,NA18559,NA18560,NA18566,NA18571,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18608,NA18609,NA18611,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18621,NA18623,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18638,NA18940,NA18941,NA18942,NA18943,NA18944,NA18947,NA18949,NA18950,NA18951,NA18953,NA18959,NA18960,NA18961,NA18963,NA18964,NA18965,NA18967,NA18968,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18981,NA18982,NA18983,NA18984,NA18985,NA18986,NA18987,NA18989,NA18990,NA18999,NA19000,NA19004,NA19005,NA19009,NA19010,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19060,NA19063,NA19064,NA19065,NA19066,NA19067,NA19070,NA19072,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19082,NA19083,NA19084,NA19085,NA19087,NA19088,NA19652,NA19655,NA19657,NA19658,NA19663,NA19664,NA19676,NA19679,NA19681,NA19682,NA19684,NA19719,NA19722,NA19728,NA19749,NA19755,NA19759,NA19770,NA19773,NA19776,NA19780,NA19785,NA19789,NA19900,NA20299,NA20317,NA20518,NA20529,NA20585,NA20770,NA20786,NA20792,NA20795,NA20796,NA20798,NA20800,NA20807,NA20809,NA20818 nsv455661 1 1152631 1211292 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv533179 M 1557 0 1 B3GALT6,FAM132A,SDF4,UBE2J2 1782681247_A nsv544964 1 1152631 1211292 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172577 M 17421 0 1 B3GALT6,FAM132A,SDF4,UBE2J2 1782681247_A nsv544965 1 1152631 1242084 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708526 M 17421 0 1 ACAP3,B3GALT6,FAM132A,MIR6726,SCNN1D,SDF4,UBE2J2 nsv159887 1 1153093 1157960 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178465 M 24 SDF4 esv3540788 1 1162672 1162882 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9739535 M 767 0 1 SDF4 nsv821698 1 1164350 1169770 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433403 M 31 1 0 B3GALT6,SDF4 NA18526 esv33767 1 1168116 1169076 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv96403,essv92753,essv95205 M 51 0 3 B3GALT6 21721,21944,22371 esv3584991 1 1171539 1179729 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840571,essv9840570,essv9840552,essv9840543,essv9840569,essv9840542,essv9840541,essv9840546,essv9840551,essv9840545,essv9840544,essv9840547,essv9840550,essv9840549,essv9840548,essv9840554,essv9840568,essv9840559,essv9840553,essv9840558,essv9840555,essv9840557,essv9840556,essv9840562,essv9840567,essv9840561,essv9840560,essv9840563,essv9840566,essv9840565,essv9840564,essv9840584,essv9840574,essv9840601,essv9840573,essv9840572,essv9840583,essv9840575,essv9840578,essv9840577,essv9840576,essv9840582,essv9840579,essv9840581,essv9840580,essv9840586,essv9840600,essv9840591,essv9840585,essv9840590,essv9840587,essv9840589,essv9840588,essv9840594,essv9840599,essv9840593,essv9840592,essv9840595,essv9840598,essv9840597,essv9840596,essv9840602,essv9840603,essv9840605,essv9840604 M 2504 65 0 FAM132A HG00341,HG00345,HG00346,HG00353,HG00376,HG00378,HG00382,HG00383,HG00406,HG00419,HG00421,HG00422,HG00428,HG00437,HG00442,HG00443,HG00445,HG00448,HG00451,HG00452,HG00457,HG00473,HG00475,HG00476,HG00479,HG00536,HG00844,HG00851,HG00881,HG00956,HG00982,HG01028,HG01029,HG01046,HG01085,HG01086,HG01104,HG01105,HG01348,HG01625,HG01700,HG01702,HG01860,HG01880,HG01896,HG01915,HG01923,HG02147,HG02278,NA06989,NA07048,NA11843,NA12058,NA18567,NA18982,NA18983,NA18985,NA19000,NA19059,NA19060,NA19062,NA19712,NA19914,NA19916,NA19920 dgv10n106 1 1180000 1180800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1118088,nsv1112515 M 2 0 2 FAM132A KWS1,KWS2 nsv1074016 1 1180099 1180700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769035 M 1 0 1 FAM132A KWP1 esv5277 1 1183198 1183861 CNV loss Wang_et_al_2008 18987735 Sequencing essv27718 M 1 0 1 "" YH esv3543010 1 1183399 1183707 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9741757 M 767 0 1 "" esv2668719 1 1183409 1183745 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6261554,essv5560832,essv6161479,essv5669228,essv6179947,essv5954327,essv6391109,essv5940370,essv6509430,essv5717657,essv6407286,essv5585922,essv6414921,essv5492979,essv6588959,essv5549681,essv6419526,essv5770629,essv6422432,essv5640761,essv6585409,essv5507509,essv6427194,essv5910444,essv5999528,essv5763188,essv6433471,essv5677508,essv6185697,essv5465241,essv6455939,essv5749614,essv6293240,essv5398259,essv6574790,essv5861847,essv6139409,essv5885116,essv6086244,essv5668182,essv6595273,essv5601093,essv6211939,essv5689300,essv6510773,essv5712419,essv6117765,essv5650707,essv6063925,essv5720768,essv6230316,essv5434280,essv6131316,essv5581180,essv6581210,essv5848923,essv6307777,essv5916807,essv6313643,essv5605806,essv6583372,essv5748541,essv6468715,essv5418766,essv6266824,essv5892946,essv6503217,essv6327485,essv6201177,essv5983254,essv6329865,essv6331138,essv6477402,essv6010561,essv6240718,essv6339447,essv6342496,essv6519482,essv6105175,essv6527997,essv6133384,essv6346924,essv6348798,essv6196338,essv6493791,essv6355570,essv6151367,essv6260648,essv6153278,essv6063511,essv6121162 M 1151 0 91 "" HG00103,HG00237,HG00260,HG00318,HG00334,HG00337,HG00345,HG00418,HG00421,HG00500,HG00531,HG00534,HG00536,HG00580,HG00584,HG00613,HG00614,HG00620,HG00651,HG00654,HG00656,HG00683,HG00692,HG00698,HG00699,HG00702,HG00704,HG00707,HG00708,HG01072,HG01334,HG01350,NA07357,NA12827,NA18489,NA18498,NA18499,NA18505,NA18530,NA18532,NA18534,NA18536,NA18542,NA18546,NA18549,NA18557,NA18561,NA18562,NA18563,NA18564,NA18566,NA18567,NA18572,NA18592,NA18593,NA18599,NA18605,NA18608,NA18610,NA18612,NA18613,NA18624,NA18635,NA18637,NA18923,NA18940,NA18953,NA18960,NA18977,NA19007,NA19102,NA19197,NA19327,NA19355,NA19359,NA19360,NA19371,NA19383,NA19391,NA19396,NA19397,NA19401,NA19463,NA19625,NA19704,NA19712,NA19786,NA20126,NA20289,NA20758,NA20796 esv3337442 1 1184189 1185087 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691758 M 185 1 0 "" NA19240 esv1750792 1 1184373 1184637 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3720664 M 2 0 1 "" HuRef nsv817616 1 1192515 1242084 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417737 M 112 0 1 ACAP3,MIR6726,SCNN1D,UBE2J2 NA19003 esv2758912 1 1199320 1319872 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757716 M 270 0 1 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 NA18991 nsv1074020 1 1208999 1209800 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772835 M 1 0 1 UBE2J2 KWP1 nsv1118089 1 1209000 1209700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980307 M 2 0 1 UBE2J2 KWS1 nsv1000169 1 1217058 1297734 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464101 M 29084 1 0 ACAP3,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,SCNN1D,TAS1R3 nsv1160788 1 1218086 1311716 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nssv4026656 M 369 0 1 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,SCNN1D,TAS1R3 nsv1118090 1 1219400 1219800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980308 M 2 0 1 SCNN1D KWS1 esv3408806 1 1219431 1219821 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652039 M 185 1 0 SCNN1D NA19240 esv25372 1 1223559 1225694 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20786 M 40 2 14 SCNN1D NA12004,NA12006,NA12044,NA12287,NA12414,NA12878,NA15510,NA18505,NA18508,NA18511,NA18907,NA18909,NA18916,NA19099,NA19129,NA19257 esv2106414 1 1223568 1225749 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4728356 M 1 0 1 SCNN1D NA18507 nsv499366 1 1223580 1225633 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv585600 M 9 1 0 SCNN1D dgv1e199 1 1223581 1225588 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2677875,esv2668981 M 1151 0 33 SCNN1D HG00136,HG00442,HG00501,HG00543,HG00581,HG00613,HG01055,HG01060,HG01079,HG01198,HG01342,NA11994,NA18523,NA18632,NA18853,NA18870,NA19056,NA19088,NA19213,NA19257,NA19346,NA19398,NA19439,NA19448,NA19451,NA19452,NA19462,NA19625,NA19722,NA19834,NA20332,NA20542,NA20586 nsv544966 1 1223621 1225559 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708527 M 17421 1 0 SCNN1D esv3545232 1 1223634 1225435 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9743979 M 767 0 1 SCNN1D esv1004967 1 1223644 1225609 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586753 M 3 1 0 SCNN1D HuRef nsv511671 1 1223858 1225621 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626308 M 1 0 1 SCNN1D 1 esv1653789 1 1223947 1224229 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3908676 M 2 0 1 SCNN1D HuRef esv1027332 1 1224273 1225316 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4148647 M 2 0 1 SCNN1D HuRef esv1323061 1 1225406 1225406 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3960677 M 2 1 0 SCNN1D HuRef dgv25n54 1 1226063 1241746 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544970,nsv544967,nsv544968 M 17421 0 3 ACAP3,MIR6726,SCNN1D nsv544969 1 1226063 1309977 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708530 M 17421 0 1 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,MXRA8,PUSL1,SCNN1D,TAS1R3 nsv160950 1 1229112 1229112 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179528 M 24 ACAP3 nsv544971 1 1229443 1286806 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708532 M 17421 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MIR6726,MIR6727,MIR6808,PUSL1,TAS1R3 esv3050 1 1232448 1233224 CNV loss Wang_et_al_2008 18987735 Sequencing essv25491 M 1 0 1 ACAP3 YH dgv6n100 1 1237130 1297734 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007042,nsv1006409 M 29084 3 22 ACAP3,CPSF3L,DVL1,GLTPD1,MIR6727,MIR6808,MXRA8,PUSL1,TAS1R3 nsv1133121 1 1238973 1239037 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987938 M 2 0 0 ACAP3 KWS1 nsv1119655 1 1239010 1239071 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982099 M 2 0 1 ACAP3 KWS1 nsv1140724 1 1239073 1239204 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3992231 M 2 0 1 ACAP3 KWS1 esv3890636 1 1239935 1288583 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780752 M 3017 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MIR6727,MIR6808,MXRA8,PUSL1,TAS1R3 nsv997291 1 1242215 1311716 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463548 M 29084 1 0 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6727,MIR6808,MXRA8,PUSL1,TAS1R3 dgv7n100 1 1242215 1314437 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008000,nsv998999 M 29084 0 2 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MIR6727,MIR6808,MXRA8,PUSL1,TAS1R3 nsv1009541 1 1242215 1453590 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696754 M 29084 1 0 ACAP3,ANKRD65,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,MIR6727,MIR6808,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B,VWA1 nsv1074967 1 1243099 1243500 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771481 M 1 0 1 ACAP3 KWP1 nsv1118091 1 1243100 1243400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980309 M 2 0 1 ACAP3 KWS1 esv3584992 1 1249799 1265722 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840607,essv9840606 M 2504 2 0 CPSF3L,GLTPD1 HG01631,NA19189 esv3366182 1 1250989 1251287 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691772 M 185 1 0 CPSF3L NA19238 esv3547454 1 1252191 1252529 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9746201 M 767 0 1 CPSF3L nsv476469 1 1252776 1252776 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019423 M 9 1 0 CPSF3L NA12878 nsv544972 1 1256552 1273116 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708533 M 17421 0 1 CPSF3L,DVL1,GLTPD1,TAS1R3 dgv26n54 1 1256552 1286806 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544975,nsv544973,nsv544976,nsv544974 M 17421 0 4 CPSF3L,DVL1,GLTPD1,MIR6808,TAS1R3 nsv1130939 1 1257800 1258200 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967637 M 2 0 1 CPSF3L KWS2 nsv1074436 1 1259099 1259700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3763744 M 1 0 1 CPSF3L KWP1 nsv1118092 1 1259200 1259700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980310 M 2 0 1 CPSF3L KWS1 nsv544977 1 1269986 1287127 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708539,nssv708538 M 17421 1 1 DVL1,MIR6808 dgv27n54 1 1273116 1288823 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544978,nsv544979 M 17421 3 0 DVL1,MIR6808,MXRA8 dgv28n54 1 1276077 1295403 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544981,nsv544980 M 17421 2 0 DVL1,MXRA8 dgv29n54 1 1276410 1287127 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544983,nsv544987,nsv544988,nsv544990,nsv544982,nsv544989 M 17421 0 8 DVL1 dgv30n54 1 1276410 1288823 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544986,nsv544985,nsv544984 M 17421 6 0 DVL1,MXRA8 nsv544991 1 1277533 1296153 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708559 M 17421 0 1 DVL1,MXRA8 dgv11n106 1 1283900 1286700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1121739,nsv1143427 M 2 0 2 DVL1 KWS1,KWS2 nsv1074439 1 1284199 1286700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769368 M 1 0 1 DVL1 KWP1 nsv511672 1 1285180 1286870 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626309 M 1 0 1 "" 1 esv23965 1 1285400 1286900 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19242 M 40 16 0 "" NA06985,NA12239,NA12414,NA15510,NA18502,NA18505,NA18508,NA18517,NA18858,NA18861,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129 esv988609 1 1285400 1286900 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586390 M 3 0 1 "" HuRef dgv31n54 1 1285430 1286447 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544992,nsv544993 M 17421 0 2 "" dgv32n54 1 1285430 1287127 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544994,nsv544995 M 17421 10 5 "" nsv544996 1 1285430 1288823 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708580,nssv708578,nssv708577,nssv708579 M 17421 4 0 MXRA8 nsv544997 1 1285953 1286747 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708581 M 17421 0 1 "" dgv33n54 1 1286009 1289761 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544998,nsv544999 M 17421 0 2 MXRA8 nsv1074030 1 1290399 1292200 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3770647 M 1 0 1 MXRA8 KWP1 nsv1136054 1 1290400 1292200 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966614,nssv3984395 M 2 0 2 MXRA8 KWS1,KWS2 esv9582 1 1302093 1303093 CNV loss Ahn_et_al_2009 19470904 Sequencing essv32023 M 1 0 0 "" esv3820 1 1302378 1302825 CNV loss Wang_et_al_2008 18987735 Sequencing essv26261 M 1 0 1 "" YH esv3584994 1 1304952 1323528 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840642 M 2504 1 0 AURKAIP1,CCNL2 HG02401 esv2540358 1 1317297 1317998 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5193104 M 1 1 0 "" NA18507 esv2758913 1 1324529 2024338 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757717,esv2756832 M 270 6 16 ANKRD65,ATAD3A,ATAD3B,ATAD3C,C1orf233,CALML6,CCNL2,CDK11A,CDK11B,GABRD,GNB1,KIAA1751,LOC148413,MIB2,MMP23A,MMP23B,MRPL20,NADK,PRKCZ,SLC35E2,SLC35E2B,SSU72,TMEM240,TMEM52,TMEM88B,VWA1 NA07056,NA10839,NA12003,NA12006,NA12144,NA12248,NA12740,NA12750,NA12762,NA18504,NA18523,NA18537,NA18632,NA18635,NA18854,NA18940,NA18976,NA18994,NA19144,NA19204,NA19205 nsv1011818 1 1329712 1510801 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696755 M 29084 1 0 ANKRD65,ATAD3A,ATAD3B,ATAD3C,CCNL2,LOC148413,MRPL20,SSU72,TMEM240,TMEM88B,VWA1 esv3577672 1 1352531 1443716 CNV loss Uddin_et_al_2014 25503493 SNP array essv9766642 M 873 0 1 ANKRD65,ATAD3B,ATAD3C,TMEM88B,VWA1 400719TM nsv1074445 1 1355499 1356100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767725 M 1 0 1 ANKRD65 KWP1 nsv1143428 1 1355600 1356100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980625 M 2 0 1 ANKRD65 KWS1 nsv545000 1 1356550 1509034 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708584 M 17421 0 1 ANKRD65,ATAD3A,ATAD3B,ATAD3C,SSU72,TMEM240,TMEM88B,VWA1 nsv1126168 1 1361800 1363600 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984396 M 2 0 1 TMEM88B KWS1 nsv1074978 1 1362399 1363600 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767910 M 1 0 1 TMEM88B KWP1 esv24333 1 1362430 1363536 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10423 M 40 1 0 TMEM88B NA06985 nsv1121740 1 1362600 1363600 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968389 M 2 0 1 TMEM88B KWS2 esv3389517 1 1362678 1363659 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652040 M 185 1 0 TMEM88B NA19240 nsv545001 1 1376147 1431798 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708585 M 17421 0 1 ATAD3B,ATAD3C,VWA1 nsv1119656 1 1383278 1383336 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982100 M 2 0 1 "" KWS1 nsv482135 1 1385069 1405538 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558496 M 1 1 0 ATAD3C KB1 dgv34n54 1 1385211 1439694 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545008,nsv545009,nsv545005,nsv545006,nsv545003,nsv545004,nsv545007,nsv545002 M 17421 0 10 ATAD3B,ATAD3C nsv945742 1 1385320 1398680 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749484,nssv1750430,nssv1750488,nssv1750434,nssv1750428,nssv1750446,nssv1750419,nssv1750431,nssv1750417,nssv1750420,nssv1749478,nssv1750461,nssv1750425,nssv1750445,nssv1750487,nssv1750464,nssv1749481,nssv1750471,nssv1749487,nssv1750435,nssv1749475,nssv1750493,nssv1749486,nssv1750455,nssv1749471,nssv1750476,nssv1750481,nssv1750458,nssv1750486,nssv1750457,nssv1749476,nssv1750432,nssv1750421,nssv1750456,nssv1749485,nssv1750450,nssv1749480,nssv1750452,nssv1750412,nssv1750470,nssv1750483,nssv1750453,nssv1749479,nssv1750501,nssv1749477,nssv1750492,nssv1750490,nssv1750497,nssv1750480,nssv1750443,nssv1750416,nssv1750439,nssv1750479,nssv1750442,nssv1750426,nssv1750466,nssv1750482,nssv1750475,nssv1749474,nssv1750437,nssv1750414,nssv1750477,nssv1750413,nssv1750468,nssv1750489,nssv1750460,nssv1750415,nssv1750463,nssv1749473,nssv1750494,nssv1749482,nssv1750469,nssv1750433,nssv1750449,nssv1750474,nssv1750499,nssv1750491,nssv1750465,nssv1750454,nssv1750448,nssv1750444,nssv1750424,nssv1750495,nssv1749470,nssv1750500,nssv1750441,nssv1750459,nssv1750427,nssv1750472,nssv1750478,nssv1750423,nssv1750447,nssv1750422,nssv1750438,nssv1750436,nssv1750498,nssv1750467 M 97 10 0 ATAD3C HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3584995 1 1388953 1410796 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840665,essv9840648,essv9840647,essv9840643,essv9840646,essv9840645,essv9840644,essv9840650,essv9840664,essv9840655,essv9840649,essv9840651,essv9840654,essv9840653,essv9840652,essv9840658,essv9840663,essv9840657,essv9840656,essv9840659,essv9840662,essv9840661,essv9840660,essv9840680,essv9840671,essv9840667,essv9840666,essv9840670,essv9840669,essv9840668,essv9840672,essv9840679,essv9840674,essv9840673,essv9840675,essv9840678,essv9840677,essv9840676,essv9840682,essv9840681,essv9840683 M 2504 0 41 ATAD3B,ATAD3C HG00109,HG00232,HG00268,HG00536,HG01085,HG01280,HG01509,HG01556,HG01607,HG01631,HG01694,HG01842,HG02232,HG02465,HG02561,HG02648,HG02725,HG03097,HG03234,HG03265,HG03298,HG03433,HG03464,HG03693,HG03844,HG04182,HG04214,NA11918,NA11920,NA12046,NA12546,NA12778,NA18486,NA18516,NA19171,NA19189,NA19308,NA19794,NA20870,NA20910,NA21108 dgv1e214 1 1392382 1427383 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing esv3584997,esv3584996 M 2504 0 42 ATAD3B,ATAD3C HG00109,HG00232,HG00268,HG00536,HG01085,HG01280,HG01509,HG01556,HG01607,HG01631,HG01694,HG01842,HG02232,HG02465,HG02648,HG02725,HG03097,HG03234,HG03265,HG03298,HG03433,HG03464,HG03693,HG03844,HG04182,HG04214,NA11918,NA11920,NA12046,NA12546,NA12778,NA18486,NA18516,NA19171,NA19189,NA19308,NA19438,NA19794,NA20314,NA20870,NA20910,NA21108 esv3584998 1 1393861 1427383 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840767,essv9840776,essv9840766,essv9840775,essv9840770,essv9840769,essv9840768,essv9840774,essv9840771,essv9840773,essv9840772,essv9840778,essv9840783,essv9840777,essv9840782,essv9840779,essv9840781,essv9840780,essv9840786,essv9840784,essv9840785 M 2504 21 0 ATAD3B,ATAD3C HG00620,HG00982,HG01757,HG01815,HG02079,HG02141,HG02165,HG02178,HG02180,HG02382,HG02389,HG02521,HG02786,HG03111,HG03235,HG03640,NA18574,NA18632,NA19383,NA19403,NA19776 esv3548565 1 1394384 1424669 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9747312 M 767 0 1 ATAD3B,ATAD3C dgv1e212 1 1397490 1429151 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577675,esv3577668,esv3577667,esv3577677 M 873 0 10 ATAD3B,ATAD3C 400554WB,400641WJ,400649PS,400800MW,400852WJ,401314MK,401432SB,401513KC,401769CR,401808PS dgv2e212 1 1397490 1453590 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577673,esv3577669,esv3577670,esv3577674,esv3577676 M 873 0 13 ATAD3A,ATAD3B,ATAD3C 400091BS,400364SS,400618GC,400695PH,400818BL,400834SS,401026AM,401380OL,401438HT,401804FG,401958MF,402001SR,402016HZ esv3584999 1 1400225 1409107 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840793,essv9840792,essv9840791,essv9840787,essv9840790,essv9840788,essv9840789,essv9840799,essv9840794,essv9840808,essv9840798,essv9840795,essv9840797,essv9840796,essv9840802,essv9840807,essv9840801,essv9840800,essv9840803,essv9840806,essv9840805,essv9840804,essv9840815,essv9840810,essv9840809,essv9840814,essv9840811,essv9840813,essv9840812,essv9840818,essv9840817,essv9840816,essv9840819,essv9840820 M 2504 0 34 ATAD3B,ATAD3C HG00109,HG00232,HG00268,HG00536,HG01085,HG01280,HG01509,HG01556,HG01631,HG01694,HG01842,HG02232,HG02465,HG02648,HG02725,HG03097,HG03234,HG03298,HG03433,HG03693,HG03844,HG04182,HG04214,NA11918,NA11920,NA12046,NA12546,NA12778,NA18486,NA19308,NA19722,NA19794,NA20910,NA21108 esv2662001 1 1400322 1408950 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5912105 M 1151 0 1 ATAD3B,ATAD3C NA19722 nsv1074040 1 1400436 1400509 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769063 M 1 0 1 ATAD3C KWP1 nsv1136055 1 1407100 1448100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989660 M 2 0 1 ATAD3A,ATAD3B KWS2 nsv482146 1 1407164 1431581 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558507 M 1 1 0 ATAD3B KB1 nsv945743 1 1411587 1426269 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750594,nssv1750546,nssv1750516,nssv1750583,nssv1750526,nssv1750531,nssv1750592,nssv1750555,nssv1750593,nssv1750561,nssv1750513,nssv1750535,nssv1750504,nssv1750556,nssv1750590,nssv1750567,nssv1750536,nssv1750548,nssv1750533,nssv1750608,nssv1750528,nssv1750527,nssv1750505,nssv1750585,nssv1750506,nssv1750541,nssv1750508,nssv1750581,nssv1750514,nssv1750580,nssv1750534,nssv1750530,nssv1750510,nssv1750575,nssv1750589,nssv1750547,nssv1750503,nssv1750586,nssv1750591,nssv1750543,nssv1750519,nssv1750544,nssv1750520,nssv1750554,nssv1750588,nssv1750582,nssv1750512,nssv1750563,nssv1750525,nssv1750579,nssv1750509,nssv1750601,nssv1750511,nssv1750538,nssv1750524,nssv1750502,nssv1750522,nssv1750574,nssv1750521,nssv1750569,nssv1750515,nssv1750571,nssv1750587,nssv1750566,nssv1750598,nssv1750550,nssv1750597,nssv1750558,nssv1750523,nssv1750570,nssv1750517,nssv1750603,nssv1750609,nssv1750549,nssv1750552,nssv1750600,nssv1750565,nssv1750559,nssv1750602,nssv1750576,nssv1750564,nssv1750604,nssv1750560,nssv1750578,nssv1750537,nssv1750572,nssv1750606,nssv1750553,nssv1750568,nssv1750542,nssv1750545,nssv1750539,nssv1750557,nssv1750599,nssv1750532,nssv1750605,nssv1750577 M 97 10 0 ATAD3B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1133122 1 1413220 1413353 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987939 M 2 0 0 ATAD3B KWS1 nsv1119396 1 1413234 1413327 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3959838 M 2 1 0 ATAD3B KWS1 esv1254392 1 1413349 1413349 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3989689 M 2 1 0 ATAD3B HuRef esv2661503 1 1414245 1416792 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6158256,essv5562046,essv5978113,essv5714896,essv6587240,essv5583587,essv6428187,essv5673238,essv5846416,essv5508008,essv6007146,essv5587762,essv5863834,essv6064386,essv5843575,essv6315584,essv6250432,essv6060091,essv5975062,essv5843579,essv6347901,essv6270841,essv6275133,essv6367328,essv6369700,essv6372532,essv6214666,essv6132856,essv6564232 M 1151 0 29 ATAD3B NA19652,NA19655,NA19660,NA19661,NA19663,NA19676,NA19682,NA19685,NA19716,NA19717,NA19722,NA19723,NA19725,NA19726,NA19731,NA19732,NA19746,NA19747,NA19750,NA19755,NA19756,NA19758,NA19759,NA19771,NA19776,NA19785,NA19786,NA19788,NA19789 esv25832 1 1414909 1416195 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11756 M 40 0 3 ATAD3B NA18511,NA18523,NA18861 nsv545010 1 1415099 1453921 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708596 M 17421 0 1 ATAD3A,ATAD3B esv3577678 1 1415848 1429151 CNV loss Uddin_et_al_2014 25503493 SNP array essv9782199 M 873 0 1 ATAD3B 401869BG esv3585000 1 1424924 1462190 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840821 M 2504 0 1 ATAD3A,ATAD3B HG02648 nsv945744 1 1432368 1465586 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750624,nssv1750645,nssv1750696,nssv1750665,nssv1750702,nssv1750714,nssv1750621,nssv1750663,nssv1750625,nssv1750649,nssv1750634,nssv1750710,nssv1750620,nssv1750659,nssv1750611,nssv1750657,nssv1750623,nssv1750680,nssv1750701,nssv1750675,nssv1750697,nssv1750647,nssv1750698,nssv1750653,nssv1750703,nssv1750676,nssv1750694,nssv1750711,nssv1750636,nssv1750705,nssv1750613,nssv1750715,nssv1750615,nssv1750660,nssv1750641,nssv1750682,nssv1750617,nssv1750654,nssv1750612,nssv1750664,nssv1750616,nssv1750713,nssv1750614,nssv1750638,nssv1750699,nssv1750689,nssv1750627,nssv1750648,nssv1750622,nssv1750637,nssv1750626,nssv1750643,nssv1750704,nssv1750688,nssv1750632,nssv1750656,nssv1750633,nssv1750693,nssv1750619,nssv1750670,nssv1750700,nssv1750674,nssv1750628,nssv1750610,nssv1750630,nssv1750635,nssv1750642,nssv1750686,nssv1750631,nssv1750708,nssv1750644,nssv1750681,nssv1750650,nssv1750661,nssv1750709,nssv1750652,nssv1750685,nssv1750687,nssv1750655,nssv1750677,nssv1750679,nssv1750669,nssv1750672,nssv1750639,nssv1750692,nssv1750671,nssv1750716,nssv1750691,nssv1750678,nssv1750646,nssv1750690,nssv1750683,nssv1750712,nssv1750666,nssv1750658,nssv1750668,nssv1750667 M 97 10 0 ATAD3A HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3585001 1 1438168 1449503 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840827,essv9840826,essv9840825,essv9840824,essv9840823,essv9840822,essv9840828 M 2504 0 7 ATAD3A HG00125,HG00146,HG01390,HG02648,HG03117,HG03460,HG03697 esv3585002 1 1441334 1443842 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840831,essv9840829,essv9840830,essv9840834,essv9840833,essv9840832,essv9840835 M 2504 0 7 "" HG00125,HG00146,HG01390,HG02648,HG02804,HG03117,HG03697 esv3585003 1 1443538 1445747 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840840,essv9840857,essv9840890,essv9840839,essv9840838,essv9840836,essv9840837,essv9840856,essv9840847,essv9840842,essv9840841,essv9840846,essv9840843,essv9840845,essv9840844,essv9840850,essv9840855,essv9840849,essv9840848,essv9840854,essv9840851,essv9840853,essv9840852,essv9840872,essv9840863,essv9840889,essv9840862,essv9840859,essv9840858,essv9840861,essv9840860,essv9840866,essv9840871,essv9840865,essv9840864,essv9840870,essv9840867,essv9840869,essv9840868,essv9840874,essv9840888,essv9840879,essv9840873,essv9840875,essv9840878,essv9840877,essv9840876,essv9840887,essv9840882,essv9840881,essv9840880,essv9840883,essv9840886,essv9840885,essv9840884,essv9840895,essv9840904,essv9840921,essv9840894,essv9840891,essv9840893,essv9840892,essv9840903,essv9840898,essv9840897,essv9840896,essv9840902,essv9840899,essv9840901,essv9840900,essv9840906,essv9840920,essv9840911,essv9840905,essv9840910,essv9840907,essv9840908,essv9840909,essv9840914,essv9840919,essv9840913,essv9840912,essv9840918,essv9840915,essv9840917,essv9840916,essv9840927,essv9840923,essv9840936,essv9840922,essv9840926,essv9840925,essv9840924,essv9840928,essv9840935,essv9840930,essv9840929,essv9840931,essv9840934,essv9840932,essv9840933,essv9840938,essv9840943,essv9840937,essv9840942,essv9840939,essv9840941,essv9840940 M 2504 0 108 "" HG00146,HG01075,HG01082,HG01108,HG01140,HG01269,HG01271,HG01360,HG01390,HG01443,HG01956,HG01958,HG02053,HG02337,HG02420,HG02455,HG02484,HG02489,HG02580,HG02583,HG02588,HG02620,HG02642,HG02648,HG02678,HG02772,HG02807,HG02851,HG02854,HG02879,HG02938,HG02968,HG02971,HG02973,HG03055,HG03085,HG03095,HG03112,HG03117,HG03120,HG03127,HG03129,HG03130,HG03162,HG03166,HG03169,HG03224,HG03270,HG03271,HG03297,HG03301,HG03303,HG03372,HG03428,HG03439,HG03442,HG03460,HG03499,HG03567,HG03697,NA18486,NA18488,NA18499,NA18505,NA18516,NA18517,NA18923,NA18939,NA19020,NA19028,NA19031,NA19093,NA19117,NA19130,NA19131,NA19138,NA19141,NA19146,NA19159,NA19175,NA19185,NA19247,NA19315,NA19317,NA19318,NA19327,NA19328,NA19351,NA19374,NA19376,NA19384,NA19390,NA19395,NA19429,NA19430,NA19435,NA19446,NA19449,NA19454,NA19456,NA19467,NA19474,NA19701,NA20126,NA20294,NA20348,NA20351,NA20356 esv2659109 1 1443563 1445764 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6274829,essv5405437,essv5950686,essv5627421,essv6135295,essv5716610,essv6427354,essv5626254,essv6564617,essv5685136,essv6068180,essv6588406,essv5885089,essv6148352,essv6056791,essv6161076,essv5913103,essv6474698,essv6107643,essv6343375,essv5958348 M 1151 0 21 "" HG01075,HG01082,HG01108,HG01140,NA19130,NA19313,NA19315,NA19317,NA19371,NA19374,NA19376,NA19381,NA19384,NA19390,NA19395,NA19429,NA19444,NA19446,NA19449,NA19467,NA19701 nsv821809 1 1443968 1447519 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1428013 M 31 1 0 "" AK10 nsv821920 1 1443968 1463826 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440791 M 31 1 0 ATAD3A NA18969 nsv482157 1 1447555 1470064 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558518 M 1 1 0 ATAD3A KB1 nsv1074453 1 1465910 1466230 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767539 M 1 0 1 ATAD3A KWP1 esv2658581 1 1465911 1466230 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5482830,essv5858092,essv5732240,essv5816004,essv5480416,essv6488077,essv5609173,essv5997694,essv5712611,essv5825216,essv5722394,essv6391429,essv5723953,essv6391818,essv5673467,essv6471708,essv5630193,essv6133414,essv5451520,essv6005572,essv5538350,essv5965350,essv5568689,essv6395439,essv5441861,essv6396485,essv5507419,essv6397483,essv5702197,essv6399190,essv5493577,essv5963869,essv5481540,essv5969045,essv5688132,essv6279719,essv5396313,essv6290555,essv5670867,essv5939453,essv5527150,essv6404248,essv5677732,essv6108372,essv5580450,essv5922774,essv5672669,essv6011467,essv5401002,essv6410581,essv5675590,essv6469356,essv5700240,essv5885037,essv5641125,essv6072390,essv5489541,essv6416002,essv5413690,essv6058176,essv5456443,essv6205353,essv5418392,essv6194183,essv5414131,essv6419027,essv5553146,essv6079796,essv5683825,essv5834945,essv5641262,essv5800780,essv5724642,essv6500668,essv5643959,essv6113627,essv5528890,essv6425592,essv5551173,essv6142004,essv5616806,essv6425893,essv5707419,essv6086199,essv5588497,essv6482893,essv5522114,essv5855505,essv5463872,essv6130279,essv5671787,essv6430631,essv5476828,essv6432025,essv5555363,essv6432023,essv5738072,essv6246072,essv5439542,essv5985570,essv5597594,essv5812123,essv5415672,essv6199770,essv5599977,essv6435646,essv5456023,essv5813001,essv5747726,essv6191951,essv5488378,essv5807425,essv5612794,essv5959211,essv5679637,essv6443605,essv5635976,essv6445387,essv5633943,essv5868543,essv5492724,essv6539627,essv5598870,essv5923966,essv5614655,essv5762497,essv5650442,essv6450209,essv5531638,essv6093191,essv5701080,essv6452456,essv5692049,essv5899920,essv5597132,essv6548233,essv5554792,essv5991250,essv5484338,essv5994443,essv5541808,essv6186597,essv5745074,essv6066088,essv5609533,essv6072748,essv5640187,essv6140657,essv5648702,essv6122795,essv5712435,essv6161424,essv5404027,essv6479147,essv5497478,essv6117756,essv5403407,essv5972124,essv5527698,essv6063579,essv5714389,essv5959060,essv5578213,essv6279475,essv5484376,essv5866453,essv5631905,essv6044419,essv5553769,essv5806292,essv5694863,essv5998119,essv5520380,essv6300044,essv5749533,essv5787953,essv5723921,essv6027434,essv5557211,essv6035940,essv5594774,essv6059203,essv5678946,essv6231944,essv5628239,essv5993427,essv5601026,essv6302686,essv5628085,essv5882887,essv5650338,essv6225800,essv5451411,essv6181341,essv5623987,essv5820972,essv5416971,essv6307412,essv5604347,essv6244691,essv5471316,essv6279148,essv5458146,essv5891209,essv5482099,essv6531665,essv5631465,essv6518177,essv5698039,essv6211165,essv5453253,essv6078561,essv5457645,essv6287490,essv5442733,essv5851382,essv5501254,essv6317076,essv5676860,essv6317091,essv5690141,essv6318757,essv6598371,essv6226627,essv6586974,essv6469707,essv6585173,essv6265122,essv6581596,essv6212988,essv6577184,essv5974677,essv6589722,essv5794862,essv6596805,essv5954013,essv6324178,essv5813678,essv5932490,essv5931672,essv6178089,essv5940742,essv6497970,essv6326756,essv6011613,essv6211568,essv6287869,essv6519435,essv5855205,essv6465710,essv6258489,essv5990101,essv6042582,essv6241924,essv5993762,essv6042587,essv6494184,essv6520422,essv5959326,essv6185820,essv5901561,essv6197366,essv5831383,essv5951084,essv6199429,essv6337906,essv6339707,essv6040829,essv5951132,essv5989514,essv6343716,essv6344023,essv6186717,essv5937129,essv6281476,essv5821996,essv5766335,essv6518871,essv6239221,essv6553516,essv5812650,essv6347709,essv6175237,essv6191601,essv5883171,essv6234765,essv6129291,essv6523508,essv6103904,essv5786024,essv6053094,essv6464835,essv5978467,essv6221054,essv6513074,essv6457568,essv5939784,essv6357829,essv6228720,essv6474611,essv5920966,essv6361569,essv6032109,essv5799072,essv6240991,essv6197313,essv5991070,essv5965280,essv5884375,essv6273412,essv6134604,essv5801413,essv6510252,essv6367525,essv6367867,essv5803216,essv6131969,essv6156669,essv6479552,essv5773997,essv5878788,essv6214095,essv6086549,essv6172914,essv6154431,essv5871753,essv6204344,essv6028335,essv6175357,essv5870848,essv6247281,essv5979075,essv6266096,essv6554091,essv6224876,essv6069039,essv6154276,essv6012078,essv5928241,essv5886508,essv6286765,essv6146300,essv5965335,essv6247479,essv5780437 M 1151 0 345 ATAD3A HG00114,HG00187,HG00239,HG00250,HG00259,HG00268,HG00281,HG00313,HG00318,HG00323,HG00329,HG00346,HG00353,HG00361,HG00375,HG00418,HG00419,HG00422,HG00437,HG00448,HG00472,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00537,HG00542,HG00543,HG00556,HG00560,HG00577,HG00578,HG00581,HG00584,HG00589,HG00590,HG00595,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00625,HG00628,HG00629,HG00635,HG00650,HG00653,HG00656,HG00657,HG00671,HG00672,HG00684,HG00689,HG00690,HG00698,HG00701,HG00702,HG00705,HG00707,HG00708,HG00740,HG01055,HG01060,HG01066,HG01067,HG01069,HG01073,HG01075,HG01079,HG01082,HG01102,HG01108,HG01125,HG01140,HG01170,HG01171,HG01342,HG01378,HG01462,HG01488,HG01492,NA07051,NA12716,NA18486,NA18489,NA18498,NA18499,NA18501,NA18502,NA18504,NA18505,NA18507,NA18508,NA18510,NA18511,NA18517,NA18519,NA18520,NA18522,NA18523,NA18534,NA18536,NA18538,NA18542,NA18545,NA18548,NA18549,NA18550,NA18555,NA18559,NA18560,NA18561,NA18562,NA18563,NA18570,NA18571,NA18573,NA18576,NA18577,NA18592,NA18595,NA18599,NA18606,NA18608,NA18610,NA18612,NA18615,NA18616,NA18623,NA18632,NA18633,NA18636,NA18638,NA18853,NA18856,NA18858,NA18861,NA18867,NA18868,NA18870,NA18871,NA18873,NA18874,NA18907,NA18908,NA18909,NA18912,NA18916,NA18917,NA18923,NA18924,NA18934,NA18940,NA18941,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18950,NA18951,NA18952,NA18953,NA18956,NA18959,NA18961,NA18963,NA18964,NA18965,NA18968,NA18972,NA18973,NA18974,NA18975,NA18976,NA18980,NA18981,NA18982,NA18983,NA18984,NA18988,NA18989,NA18999,NA19000,NA19002,NA19003,NA19005,NA19009,NA19010,NA19054,NA19057,NA19058,NA19060,NA19062,NA19064,NA19065,NA19066,NA19068,NA19070,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19083,NA19085,NA19087,NA19088,NA19093,NA19098,NA19099,NA19102,NA19108,NA19114,NA19116,NA19119,NA19129,NA19130,NA19131,NA19137,NA19138,NA19144,NA19147,NA19153,NA19160,NA19171,NA19172,NA19189,NA19190,NA19197,NA19198,NA19200,NA19204,NA19207,NA19209,NA19213,NA19223,NA19225,NA19235,NA19236,NA19238,NA19239,NA19247,NA19257,NA19311,NA19312,NA19313,NA19328,NA19332,NA19346,NA19350,NA19355,NA19360,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19399,NA19401,NA19404,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19437,NA19438,NA19440,NA19443,NA19445,NA19448,NA19449,NA19451,NA19452,NA19455,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19469,NA19470,NA19471,NA19472,NA19625,NA19663,NA19676,NA19682,NA19700,NA19701,NA19704,NA19711,NA19712,NA19720,NA19818,NA19819,NA19901,NA19916,NA19920,NA19921,NA20127,NA20276,NA20289,NA20294,NA20299,NA20341,NA20348,NA20815 esv3549676 1 1465911 1466268 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9748423 M 767 0 1 ATAD3A esv3418946 1 1472989 1473987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691939 M 185 1 0 TMEM240 NA19239 nsv1130940 1 1475300 1476100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980312,nssv3966616 M 2 0 2 TMEM240 KWS1,KWS2 esv1301718 1 1479107 1479107 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3821253 M 2 1 0 SSU72 HuRef esv2675022 1 1495577 1495857 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5557225 M 1151 0 1 SSU72 NA18973 nsv472762 1 1496605 1496605 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015897 M 9 1 0 SSU72 NA18555 esv2760410 1 1500941 1687687 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7028856,essv7028634,essv7029523,essv7027745,essv7029412,essv7014077,essv7029856,essv7017410,essv7030523,essv7010743,essv7027301,essv7029079,essv7029634,essv7025188,essv7027079,essv7028523,essv7011854,essv7027968,essv7021854,essv7028190,essv7028301,essv7030190,essv7016299,essv7027523,essv7028412,essv7019632,essv7015188,essv7022965,essv7029745,essv7027857,essv7009632,essv7012966,essv7029190,essv7026299,essv7030634,essv7029301,essv7030301,essv7027190,essv7018521,essv7029967,essv7030412,essv7028745,essv7028968,essv7020743,essv7030079,essv7024077,essv7028079,essv7027412,essv7027634 M 1109 8 41 C1orf233,CDK11A,CDK11B,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 SW_0020,SW_0058,SW_0060,SW_0061,SW_0062,SW_0072,SW_0086,SW_0119,SW_0120,SW_0144,SW_0187,SW_0198,SW_0200,SW_0589,SW_0639,SW_0648,SW_0760,SW_0773,SW_0789,SW_0805,SW_0818,SW_0831,SW_0856,SW_1083,SW_1086,SW_1103,SW_1120,SW_1139,SW_1147,SW_1149,SW_1156,SW_1189,SW_1243,SW_1262,SW_1289,SW_1302,SW_1335,SW_1366,SW_1372,SW_1396,SW_1404,SW_1414,SW_1428,SW_1436,SW_1448,SW_1455,SW_1459,SW_1483,SW_1485 esv1010850 1 1501009 1501009 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572228 M 3 1 0 SSU72 HuRef nsv1125447 1 1501010 1501107 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3983620 M 2 0 0 SSU72 KWS2 nsv1160797 1 1501596 1737357 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nssv4026767 M 369 1 0 C1orf233,CDK11A,CDK11B,GNB1,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 dgv8n100 1 1504729 1672591 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1011271,nsv1002038 M 29084 0 6 C1orf233,CDK11A,CDK11B,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 dgv5n111 1 1510801 1754842 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nsv1160837,nsv1160836,nsv1160853 M 369 0 4 C1orf233,CDK11A,CDK11B,GNB1,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B esv3585005 1 1519512 1520127 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840956,essv9840955,essv9840954,essv9840953,essv9840952,essv9840951,essv9840947,essv9840950,essv9840949,essv9840948,essv9840959,essv9840958,essv9840957 M 2504 0 13 "" HG01241,HG02281,HG02315,HG02614,HG02860,HG02981,HG03118,HG03388,HG03391,HG03499,HG03567,NA19184,NA20294 esv2677356 1 1522874 1524670 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6471016,essv6133147,essv6444599,essv5934228,essv6564666,essv5993482 M 1151 0 6 "" NA18871,NA19338,NA19382,NA19428,NA19457,NA19834 esv3585006 1 1522876 1524674 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840985,essv9840968,essv9840962,essv9840967,essv9840961,essv9840960,essv9840963,essv9840966,essv9840964,essv9840965,essv9840970,essv9840984,essv9840975,essv9840969,essv9840974,essv9840971,essv9840973,essv9840972,essv9840978,essv9840983,essv9840977,essv9840976,essv9840979,essv9840982,essv9840981,essv9840980,essv9840986,essv9840987,essv9840988 M 2504 0 29 "" HG01912,HG01958,HG02318,HG02420,HG02489,HG02944,HG03133,HG03162,HG03190,HG03198,HG03268,HG03300,HG03478,HG03583,NA18853,NA18871,NA19041,NA19172,NA19184,NA19210,NA19225,NA19319,NA19338,NA19428,NA19457,NA19834,NA20291,NA20348,NA20412 dgv12n106 1 1530300 1532700 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1139465,nsv1128582 M 2 2 0 "" KWS1,KWS2 nsv1129453 1 1530407 1530493 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3962906 M 2 0 0 "" KWS1 nsv1120183 1 1531166 1531250 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960945 M 2 0 0 "" KWS1 nsv1074046 1 1531211 1531284 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772640 M 1 0 1 "" KWP1 nsv1145305 1 1531212 1531284 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982396 M 2 0 1 "" KWS1 nsv1146684 1 1531277 1531343 CNV deletion John_et_al_2014 26484159 Sequencing nssv3995837 M 1 0 1 "" KWB1 nsv1124151 1 1531279 1531377 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3975464 M 2 0 1 "" KWS1 nsv1073621 1 1534999 1535600 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3762015 M 1 0 1 C1orf233 KWP1 nsv1136056 1 1535100 1535700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989661 M 2 0 1 C1orf233 KWS2 esv998174 1 1540850 1541970 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586347 M 3 1 0 "" HuRef esv23829 1 1540930 1541970 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15071 M 40 0 3 "" NA12006,NA12878,NA18916 esv2664117 1 1540947 1541600 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5671411,essv6407996,essv5826421,essv6246700,essv5766633,essv6453826,essv5409593,essv6200524,essv5498105,essv6261630,essv5415315,essv6301888,essv5691331,essv6301960,essv5527257,essv6316405,essv5732359,essv5918885,essv5624349,essv6084310,essv5732358,essv6282969,essv5565288,essv6215815,essv5828149,essv6205705,essv5449664,essv5979406,essv5526959,essv5931089,essv5530409,essv6255187,essv5661906,essv6488100,essv5517798,essv6532687,essv5401529,essv6222802,essv5622631,essv6139546,essv5464342,essv5923859,essv5451145,essv6205041,essv5717982,essv6574638,essv5842142,essv5984908,essv5792790,essv6285256,essv5998151,essv5872095,essv5966263 M 1151 0 53 "" HG00100,HG00118,HG00131,HG00160,HG00187,HG00232,HG00251,HG00268,HG00269,HG00310,HG00312,HG00320,HG00329,HG00344,HG00372,HG00436,HG00613,HG00640,HG00734,HG00737,HG01069,HG01070,HG01073,HG01095,HG01101,HG01107,HG01125,HG01133,HG01365,HG01390,HG01441,HG01515,HG01521,NA11829,NA11830,NA11930,NA11933,NA12043,NA12347,NA12748,NA18519,NA18593,NA18637,NA18987,NA19434,NA19443,NA20340,NA20344,NA20516,NA20530,NA20539,NA20769,NA20800 dgv35n54 1 1540957 1541589 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545012,nsv545011 M 17421 2 0 "" dgv36n54 1 1540957 1541872 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545016,nsv545015,nsv545013,nsv545014 M 17421 5 0 "" nsv545017 1 1550702 1595198 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708604 M 17421 0 1 CDK11B,MIB2,MMP23A,MMP23B,SLC35E2B nsv1074054 1 1551199 1551700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3762868 M 1 0 1 MIB2 KWP1 nsv822031 1 1552632 1553336 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434858 M 31 0 1 MIB2 NA18942 esv3575582 1 1559466 1652775 CNV gain Uddin_et_al_2014 25503493 SNP array essv9783310 M 873 1 0 CDK11A,CDK11B,MIB2,MMP23A,MMP23B,SLC35E2B 401443JK esv2661270 1 1560745 1571392 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5937538,essv5597414,essv6507928,essv5665738,essv6412490,essv5468288,essv6414757,essv5628348,essv6263804,essv5395845,essv5949761,essv5605080,essv6184775,essv5714079,essv6428230,essv5789412,essv6113138,essv5791495,essv6485645,essv5603865,essv6488862,essv5485712,essv6071888,essv5613721,essv6260213,essv5786512,essv6126898,essv5712261,essv6036632,essv5609560,essv5954824,essv5653363,essv6130761,essv5475531,essv6475633,essv5593315,essv6249390,essv5422893,essv5975210,essv5625476,essv6571513,essv5643096,essv6548334,essv5530709,essv5984077,essv5413048,essv6312198,essv5573107,essv6182156,essv5639379,essv6315048,essv5426813,essv5824569,essv5653921,essv6328148,essv5760634,essv6021583,essv5738802,essv6334615,essv5539470,essv6335638,essv5619505,essv5839359,essv6468817,essv6022491,essv5850341,essv6211219,essv5920723,essv6141404,essv6342848,essv6489635,essv6126633,essv6099313,essv6261109,essv5858500,essv6010091,essv5909524,essv6363404,essv6505176,essv6059373,essv5815876,essv5845328,essv5928230,essv5858849,essv6217076,essv6569672 M 1151 0 86 CDK11B,MIB2,MMP23A,MMP23B HG00403,HG00404,HG00418,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00556,HG00557,HG00560,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00593,HG00595,HG00596,HG00607,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00620,HG00625,HG00626,HG00628,HG00629,HG00634,HG00635,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708 esv2659399 1 1564645 1568392 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6594060,essv6584669,essv6594591,essv6122711,essv5456241,essv5840257,essv5564875,essv6171576,essv5480951,essv5975812,essv5447867,essv6392787,essv5576454,essv6398734,essv5608365,essv6176711,essv5484770,essv5825844,essv5603576,essv6403318,essv5764969,essv5838204,essv5751221,essv6198417,essv5556717,essv6077960,essv5501015,essv6062074,essv5438654,essv5922663,essv5659326,essv6416354,essv5607117,essv6421253,essv5555449,essv6105270,essv5744271,essv5973783,essv5645061,essv6445131,essv5555203,essv6445395,essv5412961,essv6451693,essv5505835,essv6068528,essv5502383,essv6271528,essv5504308,essv5932031,essv5730259,essv5994453,essv5475895,essv5845711,essv5676911,essv5910205,essv5430682,essv5789042,essv5563905,essv6261648,essv5437332,essv6299341,essv5679080,essv6543940,essv5750344,essv6210581,essv5640105,essv5814571,essv5552407,essv6498962,essv5597251,essv6182143,essv5447705,essv6130105,essv6162221,essv6531938,essv6316185,essv5792291,essv5975899,essv6489895,essv6498815,essv6043598,essv6216510,essv6057050,essv6019147,essv5792913,essv5799184,essv5917107,essv6506220,essv6325181,essv5966500,essv5967186,essv5777807,essv6256437,essv6483495,essv6334883,essv5770643,essv6335420,essv6057704,essv6210050,essv6130371,essv5844422,essv5792798,essv6344659,essv6175240,essv6540194,essv6014074,essv6583165,essv6052102,essv6214922,essv6527817,essv5903313,essv6468550,essv6363277,essv5938443,essv6365130,essv6051974,essv5971515,essv5906768,essv6547669,essv5826361,essv5909662,essv5847408,essv6373554,essv6008653,essv5788822,essv5992909,essv6185128,essv5947235,essv5970937 M 1151 0 130 MIB2,MMP23A,MMP23B HG00106,HG00108,HG00111,HG00114,HG00116,HG00117,HG00118,HG00119,HG00120,HG00122,HG00123,HG00124,HG00125,HG00126,HG00131,HG00136,HG00137,HG00138,HG00139,HG00140,HG00146,HG00148,HG00149,HG00150,HG00152,HG00154,HG00155,HG00156,HG00157,HG00158,HG00159,HG00160,HG00171,HG00174,HG00176,HG00177,HG00178,HG00180,HG00181,HG00182,HG00183,HG00185,HG00186,HG00187,HG00189,HG00190,HG00231,HG00232,HG00233,HG00236,HG00237,HG00239,HG00242,HG00243,HG00244,HG00245,HG00246,HG00247,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00258,HG00259,HG00260,HG00261,HG00262,HG00263,HG00264,HG00265,HG00266,HG00267,HG00268,HG00269,HG00270,HG00271,HG00272,HG00273,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00309,HG00310,HG00312,HG00313,HG00315,HG00318,HG00319,HG00320,HG00321,HG00323,HG00324,HG00325,HG00326,HG00327,HG00329,HG00330,HG00331,HG00334,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00345,HG00346,HG00353,HG00357,HG00361,HG00366,HG00367,HG00368,HG00372,HG00375,HG00377,HG01334 nsv1074993 1 1564999 1566500 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764195 M 1 0 1 MIB2 KWP1 nsv1136057 1 1565000 1565700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989662 M 2 0 1 MIB2 KWS2 esv27786 1 1567881 1683706 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17198 M 40 1 0 CDK11A,CDK11B,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B NA12828 nsv1118425 1 1571000 1583600 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3958931 M 2 1 0 CDK11B KWS1 nsv545018 1 1573861 1619541 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708605 M 17421 0 1 CDK11B,SLC35E2B nsv1073627 1 1574099 1575400 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764549 M 1 0 1 CDK11B KWP1 nsv1075361 1 1575399 1584500 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3762885 M 1 1 0 CDK11B KWP1 nsv1139466 1 1575800 1584500 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977053 M 2 1 0 CDK11B KWS2 esv3390461 1 1581089 1583487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691995 M 185 1 0 CDK11B NA12878 esv3585007 1 1582548 1645946 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840990,essv9840989 M 2504 0 2 CDK11A,CDK11B,MMP23A,SLC35E2B HG01806,HG03634 dgv2e199 1 1583664 1653329 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2659357,esv2670087 M 1151 0 3 CDK11A,CDK11B,MMP23A,SLC35E2B HG01354,NA12400,NA18982 esv3550788 1 1584529 1657787 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9749535 M 767 0 1 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B esv1336011 1 1584546 1584546 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4160103 M 2 1 0 CDK11B HuRef dgv3n67 1 1585374 1667157 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822253,nsv822142,nsv822364 M 31 3 0 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B NA18542,NA18566,NA18582 nsv947410 1 1588534 1595266 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765284,nssv2760684,nssv2763764,nssv2766296,nssv2761730,nssv2762239,nssv2758644,nssv2764181,nssv2765500,nssv2759096 M 97 9 0 CDK11B,SLC35E2B HGDP00456,HGDP00521,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv950516 1 1594601 1647400 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997170 M 1 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B BILGI_BIOE dgv37n54 1 1595198 1627987 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545019,nsv545025,nsv545023,nsv545024 M 17421 0 4 CDK11B,SLC35E2B dgv38n54 1 1595198 1644908 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545020,nsv545021 M 17421 3 0 CDK11A,CDK11B,MMP23A,SLC35E2B esv3585008 1 1595368 1612441 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9840991,essv9840994,essv9840999,essv9840993,essv9840992,essv9840995,essv9840998,essv9840997,essv9840996 M 2504 0 9 CDK11B,SLC35E2B HG00320,HG01806,HG01840,HG01892,HG02236,HG02399,HG03611,HG03634,NA19327 esv3585009 1 1595368 1612441 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841018,essv9841017,essv9841000,essv9841002,essv9841016,essv9841007,essv9841001,essv9841006,essv9841003,essv9841005,essv9841004,essv9841010,essv9841015,essv9841009,essv9841008,essv9841011,essv9841014,essv9841013,essv9841012,essv9841023,essv9841022,essv9841020,essv9841019,essv9841021,essv9841024 M 2504 25 0 CDK11B,SLC35E2B HG00116,HG00237,HG00608,HG00614,HG00641,HG00766,HG01174,HG01204,HG01577,HG01801,HG01810,HG01812,HG01878,HG02010,HG02052,HG02190,HG02224,HG03833,HG03885,NA18542,NA18566,NA18582,NA19723,NA20819,NA20866 nsv545022 1 1597020 1615348 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708610 M 17421 0 1 CDK11B,SLC35E2B esv2677252 1 1598413 1598580 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6378933,essv6224571,essv6551932,essv5509573,essv6384137,essv5455494,essv6227801,essv5754690,essv6386927,essv6121292,essv6388925,essv5787293,essv6391091,essv6189725,essv6393332,essv5396149,essv6253580,essv5655572,essv6576524,essv5447734,essv6399211,essv5799767,essv6518958,essv6173906,essv6401653,essv5838836,essv6402388,essv5829153,essv6466973,essv5611680,essv6407375,essv6171148,essv6259259,essv5641442,essv6583639,essv5780450,essv6466279,essv5906954,essv6544194,essv5414259,essv6492092,essv6144567,essv6476219,essv6097410,essv6280162,essv5848961,essv6421976,essv5922773,essv6425099,essv5824439,essv6426837,essv5737014,essv6432484,essv5674970,essv6486017,essv6207868,essv6439886,essv5785569,essv6441883,essv6031567,essv6443823,essv5727829,essv6452841,essv5472448,essv6507581,essv5857413,essv6454923,essv5510878,essv6455345,essv6063237,essv6483119,essv5711296,essv6294300,essv5967632,essv6245122,essv5719551,essv6531138,essv5990978,essv6469104,essv5724902,essv6530838,essv5576928,essv6506618,essv5755734,essv6561401,essv5512851,essv6298538,essv5612605,essv6517435,essv5779054,essv6300192,essv6009097,essv6280940,essv5528195,essv6245168,essv6072716,essv6259863,essv6067300,essv6303979,essv6076421,essv6511413,essv6127498,essv6523892,essv5998842,essv6304603,essv5998608,essv6253254,essv5517953,essv6264563,essv5457314,essv6583777,essv5401685,essv6533658,essv5855555,essv6277620,essv5397563,essv6311986,essv6094569,essv6477385,essv5594143,essv6506144,essv6160111,essv6231956,essv5808589,essv6247874,essv5861386,essv6524424,essv5597038,essv6325084,essv5732216,essv6518579,essv5817169,essv6326214,essv6040088,essv6327136,essv5637380,essv6461434,essv5753638,essv6241989,essv5926739,essv6573562,essv5803001,essv6329825,essv5979575,essv6275018,essv6010868,essv6547015,essv5958664,essv6579236,essv5550248,essv6592928,essv6019252,essv6475988,essv5524858,essv6520103,essv5519389,essv6255171,essv6112644,essv6468856,essv5778790,essv6338309,essv5414933,essv6534746,essv5783705,essv6475010,essv5406360,essv6463171,essv5728695,essv6547938,essv5813169,essv6587828,essv5505495,essv6523303,essv5396411,essv6534451,essv5952055,essv6280590,essv5955412,essv6348733,essv5850184,essv6256174,essv5448907,essv6283756,essv5530827,essv6235955,essv5999698,essv6513512,essv5663765,essv6351801,essv5931039,essv6582034,essv5856373,essv6579272,essv5909153,essv6352849,essv5949132,essv6228690,essv5570830,essv6353719,essv5629615,essv6457687,essv6082461,essv6458089,essv5908627,essv6354946,essv5918120,essv6488614,essv6210597,essv6357595,essv5448062,essv6496619,essv6145920,essv6359965,essv5410628,essv6360176,essv5526789,essv6362748,essv5609013,essv6363966,essv5465043,essv6505025,essv5466018,essv6488545,essv5677697,essv6503940,essv6089090,essv6579480,essv5726476,essv6369913,essv5572281,essv6484789,essv5435077,essv6582422,essv6078545,essv6480235,essv5677015,essv6374888,essv5585639,essv6560113,essv5983653,essv6481848,essv5824248,essv6577219,essv5681930,essv6377747,essv6055625,essv6377898,essv6089120,essv6254951,essv6057941,essv6306839,essv5465085,essv6249825,essv5977523,essv6308867,essv5507268,essv6468785,essv5715661,essv6380279,essv5752383,essv6548485,essv5671807,essv6528908,essv5675001,essv6385494,essv5881611,essv6237717,essv5580002,essv5598338,essv5918816,essv6167559,essv6029517,essv5796075,essv5789544,essv6221827,essv5794898,essv5703175,essv5714263,essv5827810,essv5741004,essv5471351,essv6119852,essv5824870,essv5595889,essv5686758,essv5627193,essv5586488,essv6000476,essv5454282,essv5965909,essv5539922,essv6131270,essv5558810,essv5560038,essv5690915,essv5816063,essv5778641,essv5491948,essv6121546,essv6045526,essv5459712,essv5945642,essv5742636,essv5971409,essv5913493,essv5873431,essv5443804,essv5709883,essv5913600,essv5423424,essv5706799,essv6163450,essv5636269,essv5521618,essv5560566,essv5798784,essv5890984,essv5659577,essv6059269,essv6028094,essv5842247,essv5490309,essv5577638,essv6162859,essv5974237,essv6154489,essv5876341,essv6085025,essv5902254,essv5452041,essv5503479,essv5971449,essv6111969,essv6044604,essv5621469,essv6064067,essv5882292,essv6033098,essv5532300,essv6070975,essv5517949,essv6162325,essv5660437,essv5743890,essv5719674,essv6134637,essv5682903,essv5495344,essv5841126,essv5795485,essv6163516,essv5664321,essv6195379,essv6210325,essv5769689,essv6142179,essv5517074,essv5865553,essv6003771,essv5509514,essv5852832,essv6110359,essv6148996,essv5630121,essv5453799,essv6049037,essv5415954,essv5551605,essv6143736,essv5471357,essv5639604,essv5411981,essv5796167,essv5999000,essv5983326,essv5570846,essv6212542,essv5800608,essv6183688,essv5525175,essv5799562,essv5922942,essv5818662,essv5729317,essv6219210,essv6174363,essv5713226,essv6196751,essv5624676,essv5592079,essv5796712,essv6127630,essv6144633,essv5652332,essv5670715,essv5680585,essv6120255,essv5611984,essv5875323,essv5587767,essv5625120,essv6080540,essv5814999,essv5432871,essv5555326,essv5480228,essv5869212,essv6063495,essv5554245,essv5598186,essv5751080,essv5443214,essv5974341,essv5730167,essv6205800,essv6127826,essv5669363,essv6101026,essv5540251,essv5895978,essv6096703,essv5758590,essv5725166,essv5416958,essv6063509,essv6201245,essv5632389,essv6126272,essv6059393,essv5607350,essv6092574,essv6079747,essv5472324,essv5994378,essv5806527,essv5685989,essv5511278,essv5669268,essv6037174,essv5964151,essv5465702,essv6100264,essv5505868,essv6219021,essv6024126,essv5995956,essv5680170,essv5701510 M 1151 0 448 CDK11B,SLC35E2B HG00096,HG00098,HG00100,HG00103,HG00106,HG00108,HG00111,HG00112,HG00114,HG00115,HG00116,HG00117,HG00118,HG00119,HG00120,HG00123,HG00124,HG00125,HG00126,HG00127,HG00131,HG00133,HG00136,HG00137,HG00138,HG00139,HG00140,HG00141,HG00142,HG00143,HG00144,HG00146,HG00148,HG00149,HG00150,HG00151,HG00152,HG00154,HG00155,HG00156,HG00157,HG00158,HG00159,HG00160,HG00171,HG00173,HG00174,HG00176,HG00177,HG00178,HG00179,HG00180,HG00181,HG00182,HG00185,HG00186,HG00187,HG00188,HG00189,HG00190,HG00232,HG00233,HG00236,HG00237,HG00239,HG00242,HG00243,HG00244,HG00245,HG00246,HG00247,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00258,HG00259,HG00260,HG00261,HG00262,HG00263,HG00264,HG00265,HG00266,HG00267,HG00268,HG00269,HG00270,HG00271,HG00272,HG00273,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00306,HG00308,HG00309,HG00310,HG00312,HG00313,HG00315,HG00318,HG00319,HG00320,HG00321,HG00323,HG00324,HG00325,HG00326,HG00327,HG00328,HG00329,HG00330,HG00331,HG00334,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00345,HG00346,HG00353,HG00357,HG00361,HG00366,HG00367,HG00368,HG00369,HG00372,HG00373,HG00375,HG00377,HG00418,HG00419,HG00422,HG00428,HG00436,HG00437,HG00442,HG00443,HG00449,HG00463,HG00472,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00531,HG00536,HG00537,HG00542,HG00543,HG00553,HG00554,HG00581,HG00583,HG00584,HG00590,HG00607,HG00608,HG00613,HG00614,HG00619,HG00620,HG00640,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00684,HG00689,HG00692,HG00693,HG00699,HG00704,HG00705,HG00707,HG00708,HG00736,HG00740,HG01052,HG01055,HG01060,HG01066,HG01067,HG01069,HG01070,HG01072,HG01073,HG01079,HG01080,HG01082,HG01095,HG01101,HG01102,HG01107,HG01108,HG01124,HG01125,HG01134,HG01136,HG01137,HG01140,HG01148,HG01170,HG01171,HG01173,HG01174,HG01187,HG01188,HG01250,HG01251,HG01253,HG01334,HG01350,HG01351,HG01353,HG01356,HG01360,HG01365,HG01366,HG01374,HG01375,HG01377,HG01383,HG01384,HG01389,HG01390,HG01455,HG01456,HG01462,HG01492,HG01515,NA07347,NA12154,NA12275,NA12342,NA12761,NA18499,NA18519,NA18520,NA18530,NA18534,NA18536,NA18542,NA18543,NA18544,NA18548,NA18549,NA18557,NA18559,NA18577,NA18582,NA18593,NA18595,NA18596,NA18597,NA18602,NA18606,NA18610,NA18613,NA18616,NA18617,NA18619,NA18622,NA18623,NA18632,NA18635,NA18636,NA18637,NA18933,NA18934,NA18963,NA18977,NA19000,NA19009,NA19072,NA19074,NA19082,NA19083,NA19084,NA19087,NA19223,NA19311,NA19312,NA19313,NA19315,NA19316,NA19317,NA19318,NA19319,NA19321,NA19327,NA19328,NA19331,NA19332,NA19334,NA19338,NA19346,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19399,NA19403,NA19404,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19453,NA19455,NA19456,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19469,NA19470,NA19471,NA19472,NA19473,NA19474,NA19625,NA19700,NA19701,NA19703,NA19704,NA19707,NA19711,NA19712,NA19717,NA19749,NA19756,NA19759,NA19770,NA19774,NA19783,NA19818,NA19819,NA19834,NA19835,NA19900,NA19901,NA19904,NA19908,NA19909,NA19914,NA19916,NA19917,NA19920,NA19921,NA19982,NA19985,NA20126,NA20127,NA20276,NA20278,NA20281,NA20282,NA20287,NA20289,NA20291,NA20294,NA20296,NA20314,NA20317,NA20322,NA20332,NA20334,NA20336,NA20340,NA20341,NA20342,NA20344,NA20346,NA20348,NA20356,NA20506,NA20586,NA20819 esv3551899 1 1598413 1598601 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9750646 M 767 0 1 CDK11B,SLC35E2B esv1758309 1 1598431 1598598 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3827771 M 2 0 1 CDK11B,SLC35E2B HuRef esv3585010 1 1601719 1682577 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841026,essv9841025,essv9841027 M 2504 0 3 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B HG02700,HG03858,NA19443 nsv545026 1 1602787 1638005 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708614 M 17421 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B nsv945745 1 1603369 1605663 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751728,nssv1751700,nssv1751676,nssv1751701,nssv1751655,nssv1751699,nssv1751654,nssv1751691,nssv1751656,nssv1751681,nssv1751672,nssv1751718,nssv1751663,nssv1749116,nssv1751726,nssv1751678,nssv1749112,nssv1751715,nssv1751729,nssv1751687,nssv1749111,nssv1751670,nssv1751666,nssv1749117,nssv1749113,nssv1751679,nssv1751662,nssv1751704,nssv1751673,nssv1751705,nssv1751727,nssv1749118,nssv1751646,nssv1751710,nssv1749109,nssv1751714,nssv1751647,nssv1751702,nssv1751651,nssv1751690,nssv1751668,nssv1751709,nssv1751731,nssv1751674,nssv1751648,nssv1751693,nssv1751659,nssv1751683,nssv1749110,nssv1751667,nssv1750719,nssv1751685,nssv1751650,nssv1751721,nssv1751649,nssv1751684,nssv1751644,nssv1751720,nssv1751657,nssv1751695,nssv1751652,nssv1749114,nssv1751658,nssv1749115,nssv1751661,nssv1751671,nssv1751660,nssv1751688,nssv1751665,nssv1751696,nssv1751645,nssv1751706,nssv1751689,nssv1751725,nssv1751677,nssv1751703,nssv1751716,nssv1751722,nssv1749123,nssv1751698,nssv1749121,nssv1751682,nssv1749122,nssv1751711,nssv1750717,nssv1751713,nssv1751692,nssv1751712,nssv1751724,nssv1751707,nssv1751680,nssv1751723,nssv1751717,nssv1749119,nssv1751669,nssv1749120,nssv1751694 M 97 10 0 CDK11B,SLC35E2B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3585011 1 1609210 1615827 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841032,essv9841031,essv9841030,essv9841029,essv9841028,essv9841034,essv9841039,essv9841033,essv9841038,essv9841035,essv9841037,essv9841036,essv9841042,essv9841041,essv9841040,essv9841043,essv9841044 M 2504 0 17 CDK11B,SLC35E2B HG01441,HG01806,HG01845,HG01855,HG01889,HG02057,HG02236,HG02399,HG02938,HG03052,HG03224,HG03279,HG03611,HG03634,NA18635,NA19327,NA20340 esv3585012 1 1609210 1615827 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841049,essv9841048,essv9841047,essv9841046,essv9841045,essv9841051,essv9841055,essv9841050,essv9841064,essv9841054,essv9841053,essv9841052,essv9841058,essv9841056,essv9841063,essv9841057,essv9841059,essv9841062,essv9841061,essv9841060,essv9841066,essv9841065,essv9841070,essv9841067,essv9841069,essv9841068 M 2504 26 0 CDK11B,SLC35E2B HG00116,HG00237,HG00614,HG00641,HG00766,HG01551,HG01577,HG01801,HG01810,HG01812,HG01878,HG02010,HG02052,HG02087,HG02190,HG02224,HG03833,HG03885,NA11995,NA18542,NA18566,NA18582,NA18957,NA19723,NA20819,NA20866 esv3553010 1 1611009 1611326 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9751757 M 767 0 1 CDK11B,SLC35E2B dgv16e59 1 1613289 1613587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330776,esv3412710 M 185 2 0 CDK11B,SLC35E2B NA19239,NA19240 esv6099 1 1615214 1615401 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28540 M 1 0 0 CDK11B,SLC35E2B esv3577686 1 1616990 1652775 CNV loss Uddin_et_al_2014 25503493 SNP array essv9784421 M 873 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B 400834SS dgv3e212 1 1616990 1687674 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577680,esv3577687,esv3577685,esv3577692,esv3577690,esv3577681,esv3577683,esv3577679,esv3577691,esv3577684,esv3577689,esv3577688 M 873 0 75 CDK11A,CDK11B,MMP23A,NADK,SLC35E2,SLC35E2B 400041LJ,400070PC,400076LC,400083TG,400094RS,400108BJ,400155CW,400156WT,400177CG,400178RH,400191MP,400199SA,400203NA,400227MM,400231LP,400248JO,400249BC,400294HD,400319HT,400376SJ,400383HL,400439IM,400458LS,400494ML,400501SJ,400502GS,400712GC,400739SS,400758KP,400821FE,400833BB,400920MK,400930MK,401005BL,401036WS,401067BD,401096SL,401102RD,401111LH,401113MJ,401250WD,401268PS,401274PA,401353BC,401386WA,401395OP,401414CR,401438HT,401444LD,401459HF,401465TB,401491BB,401540NA,401589HP,401592NR,401595BL,401612HB,401636WR,401640WJ,401664SD,401734PG,401735LE,401773AM,401841OB,401847RK,401855RE,401858TP,401860TJ,401894PD,401956DQ,401958MF,401979TB,402008MC,402009WP,402042BJ nsv545027 1 1619541 1664124 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708616,nssv708615 M 17421 0 2 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B dgv39n54 1 1620861 1653672 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545028,nsv545029 M 17421 0 2 CDK11A,CDK11B,MMP23A,SLC35E2B esv3891747 1 1620861 1682374 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25800672 M 3017 0 1 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B nsv545030 1 1620861 1706136 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708619 M 17421 1 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2,SLC35E2B dgv2e214 1 1626665 1681048 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing esv3585014,esv3585013 M 2504 0 199 CDK11A,CDK11B,MMP23A,SLC35E2 HG00121,HG00155,HG00178,HG00250,HG00253,HG00259,HG00284,HG00310,HG00331,HG00336,HG00362,HG00365,HG00452,HG00479,HG00531,HG00557,HG00581,HG00596,HG00610,HG00637,HG00656,HG01064,HG01066,HG01111,HG01122,HG01139,HG01170,HG01182,HG01188,HG01190,HG01191,HG01242,HG01277,HG01281,HG01308,HG01354,HG01374,HG01375,HG01393,HG01396,HG01403,HG01431,HG01441,HG01500,HG01501,HG01524,HG01531,HG01551,HG01593,HG01603,HG01676,HG01702,HG01709,HG01757,HG01784,HG01790,HG01798,HG01840,HG01852,HG01889,HG01912,HG01936,HG02026,HG02053,HG02057,HG02060,HG02073,HG02128,HG02134,HG02165,HG02239,HG02282,HG02309,HG02330,HG02433,HG02490,HG02501,HG02558,HG02601,HG02700,HG02728,HG02837,HG02938,HG02952,HG02976,HG03052,HG03097,HG03099,HG03103,HG03117,HG03198,HG03224,HG03246,HG03258,HG03279,HG03351,HG03352,HG03370,HG03455,HG03470,HG03485,HG03634,HG03646,HG03681,HG03692,HG03696,HG03745,HG03752,HG03757,HG03765,HG03781,HG03800,HG03803,HG03823,HG03856,HG03858,HG03899,HG03945,HG03967,HG03976,HG04015,HG04026,HG04063,HG04099,HG04107,HG04131,HG04176,HG04195,HG04211,HG04227,HG04229,NA06989,NA12003,NA12006,NA12144,NA12718,NA12750,NA12751,NA12762,NA12843,NA18504,NA18538,NA18552,NA18565,NA18596,NA18620,NA18631,NA18632,NA18635,NA18638,NA18645,NA18647,NA18934,NA18940,NA18957,NA18976,NA19070,NA19081,NA19144,NA19200,NA19207,NA19309,NA19328,NA19346,NA19384,NA19391,NA19430,NA19443,NA19654,NA19717,NA19777,NA19792,NA20340,NA20362,NA20505,NA20512,NA20518,NA20539,NA20544,NA20581,NA20753,NA20803,NA20804,NA20815,NA20847,NA20849,NA20876,NA20877,NA20892,NA20896,NA20902,NA21088,NA21090,NA21094,NA21097,NA21102,NA21109,NA21116,NA21135 esv3585015 1 1627805 1673809 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841402,essv9841401,essv9841391,essv9841386,essv9841400,essv9841390,essv9841387,essv9841389,essv9841388,essv9841394,essv9841392,essv9841399,essv9841393,essv9841395,essv9841398,essv9841397,essv9841396,essv9841416,essv9841407,essv9841433,essv9841405,essv9841406,essv9841404,essv9841403,essv9841408,essv9841415,essv9841410,essv9841409,essv9841414,essv9841411,essv9841413,essv9841412,essv9841423,essv9841418,essv9841432,essv9841417,essv9841422,essv9841419,essv9841421,essv9841420,essv9841426,essv9841431,essv9841425,essv9841424,essv9841427,essv9841430,essv9841429,essv9841428,essv9841439,essv9841434,essv9841438,essv9841435,essv9841437,essv9841436,essv9841441,essv9841440 M 2504 56 0 CDK11A,CDK11B,MMP23A,SLC35E2 HG00139,HG00174,HG00257,HG00258,HG00282,HG00382,HG00693,HG01047,HG01048,HG01173,HG01248,HG01311,HG01456,HG01518,HG01524,HG01530,HG01630,HG01632,HG01685,HG01801,HG01868,HG01927,HG01974,HG02143,HG02154,HG02223,HG02351,HG02355,HG02502,HG02851,HG03388,HG03428,HG03517,HG03812,HG03833,HG04173,NA07056,NA11892,NA11920,NA12828,NA12889,NA18537,NA18582,NA19204,NA19707,NA19740,NA20127,NA20516,NA20528,NA20785,NA20808,NA20809,NA20832,NA20846,NA20851,NA20895 dgv9n100 1 1627906 1687928 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998152,nsv1007850,nsv1003869 M 29084 0 4 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 nsv1011683 1 1627906 1688192 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471705 M 29084 1 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 nsv1003545 1 1627906 1692321 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477823,nssv3467704 M 29084 1 1 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 esv2764265 1 1627918 1672603 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004884,essv7004885,essv7004895,essv7004883,essv7004897,essv7004905,essv7004909,essv7004904,essv7004907,essv7004899,essv7004891,essv7004894,essv7004893,essv7004880,essv7004912,essv7004901,essv7004892,essv7004896,essv7004882,essv7004881,essv7004886,essv7004888,essv7004898,essv7004908,essv7004910,essv7004902,essv7004906,essv7004903,essv7004890,essv7004887 M 1109 2 27 CDK11A,CDK11B,MMP23A,SLC35E2 RW_0007,RW_0008,RW_0057,RW_0062,RW_0075,RW_0108,RW_0119,RW_0137,RW_0154,RW_0162,RW_0166,RW_0179,RW_0186,RW_0203,RW_0221,RW_0276,RW_0324,RW_0341,RW_0359,RW_0510,RW_0512,RW_0523,RW_0529,RW_0533,RW_0560,RW_0645,RW_0646,RW_0662,RW_0663 nsv442858 1 1627918 1672603 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617569,nssv1617558,nssv1617168,nssv1617380,nssv1617580,nssv1617414,nssv1617425,nssv1617625,nssv1617358,nssv1617279,nssv1617491,nssv1617614,nssv1617536,nssv1617436,nssv1617403,nssv1617503,nssv1617547,nssv1617458,nssv1617469,nssv1617447,nssv1617525,nssv1616835,nssv1617591,nssv1617369,nssv1617057,nssv1617392,nssv1617636,nssv1617480,nssv1616946,nssv1617514,nssv1617602 M 270 6 25 CDK11A,CDK11B,MMP23A,SLC35E2 NA07056,NA10835,NA10839,NA12003,NA12006,NA12144,NA12248,NA12740,NA12750,NA12751,NA12762,NA18504,NA18523,NA18537,NA18552,NA18582,NA18620,NA18632,NA18635,NA18852,NA18854,NA18940,NA18976,NA18994,NA19144,NA19145,NA19200,NA19204,NA19205,NA19207,NA19208 nsv545031 1 1627987 1686040 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708620 M 17421 1 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 dgv4e212 1 1628405 1687927 CNV gain Uddin_et_al_2014 25503493 SNP array esv3577804,esv3567895,esv3576693,esv3578915 M 873 12 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 400109LJ,400213DB,400343BD,400375KA,400641WJ,400793BR,400800MW,401087SF,401117NA,401460LW,401490TL,401526WB nsv1160864 1 1628418 1669101 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nssv4027323 M 369 1 0 CDK11A,CDK11B,MMP23A,SLC35E2 nsv1160925 1 1628418 1687587 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nssv4027434,nssv4027545 M 369 0 2 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 nsv436343 1 1629618 1684180 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466028 M 2 0 1 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 NA18505 nsv834091 1 1632798 1812077 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443851 M 95 0 1 CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2 nsv482168 1 1634170 1655791 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558529 M 1 1 0 CDK11A,CDK11B KB1 nsv822475 1 1635000 1680585 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1439447 M 31 1 0 CDK11A,CDK11B,SLC35E2 NA18537 nsv822586 1 1635201 1650813 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1438578 M 31 1 0 CDK11A,CDK11B NA18973 nsv822697 1 1635205 1667157 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422355 M 31 0 1 CDK11A,CDK11B,SLC35E2 NA18552 nsv545032 1 1638005 1664124 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708621,nssv708624,nssv708622,nssv708623 M 17421 0 4 CDK11A,CDK11B,SLC35E2 dgv40n54 1 1638005 1680442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545034,nsv545033,nsv545037 M 17421 0 5 CDK11A,CDK11B,SLC35E2 dgv5e212 1 1642090 1687674 CNV gain Uddin_et_al_2014 25503493 SNP array esv3581137,esv3580026 M 873 2 0 CDK11A,CDK11B,NADK,SLC35E2 400785AK,401820SD dgv41n54 1 1644908 1671782 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545036,nsv545035 M 17421 0 3 CDK11A,CDK11B,SLC35E2 nsv1118094 1 1645000 1646800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980313 M 2 0 1 CDK11A,CDK11B KWS1 esv3567896 1 1647610 1672591 CNV gain Uddin_et_al_2014 25503493 SNP array essv9768533,essv9768422 M 873 2 0 CDK11A,CDK11B,SLC35E2 401432SB,401693RC nsv822809 1 1647869 1667157 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431056 M 31 0 1 CDK11A,CDK11B,SLC35E2 AK18 nsv509368 1 1648331 1648331 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623768 M 4 1 0 CDK11A,CDK11B NA18994 nsv1152112 1 1648499 1650100 CNV duplication John_et_al_2014 26484159 Sequencing nssv3996720 M 1 1 0 CDK11A,CDK11B KWB1 nsv436733 1 1648626 1648695 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466139 M 2 1 0 CDK11A,CDK11B NA18505 nsv159838 1 1649026 1649076 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178416 M 24 CDK11A,CDK11B esv3585016 1 1649047 1650523 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841468,essv9841467,essv9841466,essv9841448,essv9841465,essv9841442,essv9841447,essv9841443,essv9841446,essv9841445,essv9841444,essv9841450,essv9841455,essv9841464,essv9841449,essv9841454,essv9841451,essv9841453,essv9841452,essv9841458,essv9841463,essv9841457,essv9841456,essv9841459,essv9841462,essv9841461,essv9841460,essv9841497,essv9841480,essv9841470,essv9841469,essv9841474,essv9841479,essv9841471,essv9841473,essv9841472,essv9841478,essv9841475,essv9841477,essv9841476,essv9841487,essv9841482,essv9841496,essv9841481,essv9841486,essv9841483,essv9841485,essv9841484,essv9841490,essv9841495,essv9841489,essv9841488,essv9841494,essv9841491,essv9841493,essv9841492,essv9841500,essv9841503,essv9841499,essv9841498,essv9841502,essv9841501,essv9841506,essv9841505,essv9841504,essv9841507,essv9841508 M 2504 0 67 CDK11A,CDK11B HG00155,HG00259,HG00310,HG00479,HG00851,HG01064,HG01122,HG01182,HG01188,HG01431,HG01501,HG01757,HG01784,HG01794,HG01889,HG02026,HG02032,HG02047,HG02057,HG02073,HG02128,HG02134,HG02164,HG02239,HG02282,HG02383,HG02490,HG02558,HG02601,HG02728,HG02837,HG03681,HG03696,HG03730,HG03745,HG03757,HG03781,HG03803,HG03858,HG03899,HG03945,HG03967,HG03976,HG04026,HG04176,HG04229,NA12144,NA12718,NA12750,NA12751,NA18504,NA18620,NA18632,NA18647,NA18957,NA18976,NA19070,NA19777,NA19792,NA20362,NA20508,NA20512,NA20518,NA20544,NA20581,NA20804,NA21135 esv988165 1 1649051 1649101 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570116 M 3 0 1 CDK11A,CDK11B HuRef esv1455500 1 1649063 1649114 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4050580 M 2 0 1 CDK11A,CDK11B HuRef nsv160496 1 1649094 1649144 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179074 M 24 CDK11A,CDK11B esv6106 1 1649450 1650789 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28547 M 1 0 0 CDK11A,CDK11B esv3585017 1 1649620 1650651 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841530,essv9841512,essv9841529,essv9841511,essv9841510,essv9841509,essv9841514,essv9841528,essv9841519,essv9841513,essv9841518,essv9841515,essv9841517,essv9841516,essv9841522,essv9841527,essv9841521,essv9841520,essv9841523,essv9841526,essv9841525,essv9841524,essv9841561,essv9841535,essv9841544,essv9841534,essv9841531,essv9841532,essv9841533,essv9841538,essv9841543,essv9841537,essv9841536,essv9841542,essv9841539,essv9841541,essv9841540,essv9841546,essv9841560,essv9841551,essv9841545,essv9841550,essv9841547,essv9841549,essv9841548,essv9841554,essv9841559,essv9841553,essv9841552,essv9841555,essv9841558,essv9841557,essv9841556,essv9841562,essv9841567,essv9841566,essv9841563,essv9841565,essv9841564,essv9841568,essv9841570,essv9841569,essv9841571,essv9841574,essv9841573,essv9841572 M 2504 0 66 CDK11A,CDK11B HG00155,HG00259,HG00310,HG00479,HG00851,HG01064,HG01122,HG01182,HG01188,HG01431,HG01501,HG01757,HG01784,HG01794,HG01889,HG02026,HG02032,HG02047,HG02057,HG02073,HG02128,HG02134,HG02164,HG02239,HG02282,HG02383,HG02490,HG02558,HG02601,HG02728,HG02837,HG03681,HG03696,HG03730,HG03745,HG03757,HG03781,HG03803,HG03858,HG03899,HG03945,HG03967,HG03976,HG04026,HG04176,HG04229,NA12144,NA12718,NA12750,NA12751,NA18620,NA18632,NA18647,NA18957,NA18976,NA19070,NA19777,NA19792,NA20362,NA20508,NA20512,NA20518,NA20544,NA20581,NA20804,NA21135 nsv955437 1 1649679 1650559 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000429 M 1 0 1 CDK11A,CDK11B BILGI_BIOE nsv160062 1 1649716 1650677 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178640 M 24 CDK11A,CDK11B nsv160158 1 1650603 1650603 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178736 M 24 CDK11A,CDK11B esv2668621 1 1651159 1651941 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5629650,essv6502114,essv5854246,essv5981084,essv5428122,essv6382267,essv5875369,essv6183585,essv5766798,essv6405662,essv5925180,essv6181979,essv5459191,essv6412603,essv5721102,essv6423905,essv5705033,essv6429076,essv5734885,essv6153819,essv5447015,essv6431866,essv5509797,essv6119048,essv5811208,essv6248804,essv5416521,essv6441545,essv5679734,essv6441948,essv5511908,essv6442324,essv5707911,essv6150455,essv5533725,essv6450861,essv5761947,essv6026905,essv5533975,essv6211439,essv5829857,essv6161260,essv5957397,essv5996000,essv5526479,essv6305366,essv5945228,essv6288639,essv5858348,essv6551084,essv5777711,essv6057054,essv5757432,essv6008529,essv5842807,essv6174707,essv5545500,essv6509143,essv5415020,essv6481896,essv5640630,essv6159658,essv5851810,essv6478047,essv5445813,essv6491661,essv5427661,essv6236522,essv5857834,essv6136806,essv5521262,essv6333757,essv5501939,essv6574947,essv5786016,essv6172833,essv5915606,essv6591585,essv5556298,essv6214341,essv5493869,essv5979668,essv5497841,essv6006807,essv5538931,essv6567674,essv5681328,essv6368978,essv5729436,essv6208300,essv5414059,essv6165381,essv5740387,essv6020832,essv5824414,essv6221133,essv5497193,essv6101359,essv5400219,essv6383329,essv5609773 M 1151 0 101 CDK11A,CDK11B HG00112,HG00126,HG00133,HG00158,HG00258,HG00276,HG00326,HG00357,HG00635,HG00641,HG00704,HG00737,HG01067,HG01094,HG01101,HG01111,HG01112,HG01124,HG01133,HG01353,HG01375,HG01497,HG01521,NA06989,NA07037,NA07056,NA11892,NA11920,NA11994,NA12155,NA12341,NA12347,NA12717,NA18488,NA18507,NA18535,NA18541,NA18565,NA18567,NA18615,NA18617,NA18621,NA18868,NA18873,NA18973,NA18988,NA18989,NA19000,NA19004,NA19056,NA19057,NA19059,NA19060,NA19066,NA19068,NA19072,NA19078,NA19079,NA19083,NA19087,NA19092,NA19189,NA19235,NA19317,NA19334,NA19346,NA19350,NA19376,NA19381,NA19383,NA19384,NA19391,NA19394,NA19397,NA19403,NA19431,NA19467,NA19625,NA19652,NA19679,NA19684,NA19700,NA19704,NA19707,NA19712,NA19717,NA19725,NA19729,NA19731,NA19755,NA19776,NA19782,NA19835,NA19901,NA19917,NA19920,NA20507,NA20761,NA20768,NA20804,NA20815 dgv42n54 1 1658945 1683565 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545039,nsv545038 M 17421 0 2 NADK,SLC35E2 nsv1076312 1 1659699 1662700 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3768013 M 1 1 0 SLC35E2 KWP1 nsv950521 1 1660501 1691900 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997181 M 1 0 1 NADK,SLC35E2 BILGI_BIOE nsv545040 1 1664019 1671782 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708635,nssv708636 M 17421 0 2 SLC35E2 nsv945747 1 1666114 1668587 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750171,nssv1750163,nssv1750141,nssv1750159,nssv1749156,nssv1749178,nssv1750175,nssv1749163,nssv1750129,nssv1749166,nssv1750167,nssv1750162,nssv1750115,nssv1749160,nssv1750152,nssv1749159,nssv1750155,nssv1750160,nssv1750106,nssv1749175,nssv1750128,nssv1750104,nssv1750137,nssv1749161,nssv1750125,nssv1749176,nssv1750146,nssv1749170,nssv1750135,nssv1749162,nssv1750122,nssv1750165,nssv1750145,nssv1749172,nssv1750110,nssv1749177,nssv1750117,nssv1749168,nssv1750131,nssv1750161,nssv1750143,nssv1750111,nssv1750149,nssv1750157,nssv1750113,nssv1750166,nssv1750156,nssv1750109,nssv1750105,nssv1749164,nssv1749179,nssv1749173,nssv1750127,nssv1749174,nssv1750136,nssv1749167,nssv1750120,nssv1750164,nssv1750139,nssv1749165,nssv1750172,nssv1750158,nssv1750176,nssv1749169,nssv1750134,nssv1750108,nssv1750123,nssv1749157,nssv1750153,nssv1749158,nssv1750119,nssv1749171,nssv1750169,nssv1750150,nssv1750151,nssv1750132,nssv1750114,nssv1750118,nssv1750173,nssv1750170,nssv1750121,nssv1750154,nssv1750142,nssv1750130,nssv1750174,nssv1750112,nssv1750148,nssv1750147,nssv1750140,nssv1750126,nssv1750107,nssv1750133,nssv1750116,nssv1750138,nssv1750144,nssv1750168,nssv1750124 M 97 10 0 SLC35E2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3408726 1 1681046 1681067 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863669,essv7863670 M 185 2 0 "" NA11992,NA18522 esv1736683 1 1681067 1681067 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3785632 M 2 1 0 "" HuRef nsv945749 1 1683296 1691866 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750183,nssv1750187,nssv1750179,nssv1750181,nssv1750184,nssv1750185,nssv1750186,nssv1750182,nssv1750178,nssv1750180,nssv1750177 M 97 10 0 NADK HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545041 1 1684472 1711698 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708637 M 17421 0 1 NADK nsv1160926 1 1704138 1836927 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nssv4027656 M 369 1 0 GNB1,NADK dgv10n100 1 1711414 1815981 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1007257,nsv1011008 M 29084 2 0 GNB1,NADK nsv951380 1 1716601 1722700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997192 M 1 0 1 GNB1 BILGI_BIOE nsv1133790 1 1742145 1742214 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969361 M 2 0 1 GNB1 KWS2 nsv834335 1 1744910 1933405 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443962 M 95 0 1 CALML6,GNB1,KIAA1751,TMEM52 esv2619193 1 1771014 1777460 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5309496 M 1 0 1 GNB1 NA18507 esv3585018 1 1772216 1773658 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841575 M 2504 0 1 GNB1 HG00146 esv2658596 1 1772235 1773644 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5493454 M 1151 0 1 GNB1 HG00146 esv2666680 1 1773809 1775650 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5578378 M 1151 0 1 GNB1 NA18983 esv3577696 1 1774335 1778090 CNV loss Uddin_et_al_2014 25503493 SNP array essv9778978,essv9773755,essv9776866,essv9778644,essv9781422,essv9769644,essv9777643,essv9769200,essv9771755,essv9779089,essv9773977,essv9777532,essv9777421,essv9779644,essv9773422,essv9780866,essv9769533,essv9774422,essv9772533,essv9773866,essv9770422,essv9775977,essv9774755,essv9780089,essv9777310,essv9770089,essv9771866,essv9778755,essv9775644,essv9779866,essv9781200,essv9780644,essv9774866,essv9780311,essv9776644,essv9769978,essv9773644,essv9773088,essv9774088,essv9780977,essv9779755,essv9779311,essv9770644,essv9771311,essv9775310,essv9773311,essv9778533,essv9775533,essv9768867,essv9769866,essv9774977,essv9780200,essv9769089,essv9777756,essv9770311,essv9771089,essv9780755,essv9769311,essv9776088,essv9770533,essv9772977,essv9772422,essv9771533,essv9778867,essv9769755,essv9780533,essv9778311,essv9776199,essv9779978,essv9781089,essv9771977,essv9777978,essv9773199,essv9771200,essv9771644,essv9775866,essv9769422,essv9772200,essv9772088,essv9772311,essv9770200,essv9777088,essv9775199,essv9768644,essv9774199,essv9773533,essv9770866,essv9778089,essv9774310,essv9776977,essv9772644,essv9770755,essv9777199,essv9768978,essv9772866,essv9781311,essv9774644,essv9768755,essv9780422,essv9781533,essv9776310,essv9776532,essv9776421,essv9779200,essv9777867,essv9772755,essv9771422,essv9778422,essv9775421,essv9770977,essv9776755,essv9778200,essv9779422,essv9779533,essv9774533,essv9775755,essv9775088 M 873 0 117 GNB1 4000046CJ,400012CJ,400053LE,400061DE,400066MA,400072GR,400101EH,400113LD,400127MD,400136DM,400138LA,400148MS,400150SS,400152MR,400168HC,400171BJ,400186WC,400205SP,400206SC,400207HN,400227MM,400236DB,400240HJ,400267GD,400278PD,400302HW,400320RN,400340CD,400344DR,400353ML,400361HC,400453LN,400493KH,400496BL,400545EW,400564SN,400588BE,400595CP,400603CJ,400611GG,400618GC,400619MP,400643LD,400649PS,400671PP,400695PH,400717BD,400749VW,400778SR,400788PV,400811SK,400817MB,400818BL,400844GP,400866RR,400881GS,400953MR,401027KW,401029SD,401050GS,401052BM,401100SJ,401112LG,401143LK,401162TM,401175FA,401192MJ,401200BD,401203MP,401249TP,401258PC,401261HD,401265CB,401295HB,401355CD,401359HF,401384BP,401410BJ,401413RG,401448BJ,401458RT,401468RL,401478RD,401487FW,401505WI,401514BA,401536BD,401567BD,401582GG,401586RS,401594MP,401646MC,401661HD,401673DM,401719RL,401725MR,401762SD,401778CB,401799DP,401801LA,401817MC,401818PC,401822TL,401832MC,401873BK,401879HJ,401898DS,401927SK,401942MP,401943KA,401950MD,401962BK,402022SM,402061PI,402064DC,402073LQ,402074RR esv3577695 1 1774335 1781927 CNV loss Uddin_et_al_2014 25503493 SNP array essv9781755,essv9781866,essv9781977,essv9781644 M 873 0 4 GNB1 401346FJ,401347DH,401726LW,401932GN nsv478764 1 1787832 1787832 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015949 M 9 1 0 GNB1 NA18507 nsv1075000 1 1788687 1788744 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3770055 M 1 0 1 GNB1 KWP1 nsv1113059 1 1788688 1788744 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995081,nssv3969732 M 2 0 2 GNB1 KWS1,KWS2 esv3556343 1 1816203 1817099 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9755090 M 767 0 1 GNB1 nsv10272 1 1820454 1823312 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21432,nssv21437,nssv21422,nssv24607,nssv18097,nssv24617,nssv26884,nssv28044,nssv21440,nssv28535,nssv28034,nssv21434,nssv28930,nssv28028,nssv21425,nssv29276,nssv24619 M 31 17 0 GNB1 NA07029,NA07048,NA10847,NA10863,NA11830,NA12740,NA12872,NA18502,NA18504,NA18517,NA18552,NA18563,NA18572,NA18853,NA19007,NA19144,NA19173 nsv951400 1 1820801 1875200 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997204 M 1 0 1 CALML6,GNB1,TMEM52 BILGI_BIOE nsv1118095 1 1820900 1823400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980314 M 2 0 1 GNB1 KWS1 nsv1121741 1 1821600 1823300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968390 M 2 0 1 GNB1 KWS2 dgv17e59 1 1829392 1830490 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3359268,esv3369206 M 185 2 0 "" NA19239,NA19240 nsv10383 1 1846615 1859881 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24603 M 31 1 0 CALML6,TMEM52 NA18502 esv2587332 1 1860515 1860964 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5262341 M 1 1 0 "" NA18507 esv3380384 1 1860619 1860968 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652057 M 185 1 0 "" NA19240 nsv512709 1 1860724 1860864 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625333 M 1 1 0 "" 1 nsv1077279 1 1865399 1867100 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3768630 M 1 1 0 "" KWP1 nsv1153293 1 1866185 1866279 CNV insertion John_et_al_2014 26484159 Sequencing nssv4001213 M 1 1 0 "" KWB1 esv6744 1 1866253 1867224 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29185 M 1 0 0 "" esv5421 1 1866304 1867172 CNV loss Wang_et_al_2008 18987735 Sequencing essv27862 M 1 0 1 "" YH esv3557454 1 1866340 1867041 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9756201 M 767 0 1 "" nsv1130626 1 1866342 1867011 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966939 M 2 0 1 "" KWS2 nsv1148856 1 1866373 1867034 CNV deletion John_et_al_2014 26484159 Sequencing nssv3997641 M 1 0 1 "" KWB1 esv3385307 1 1869192 1870790 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692082 M 185 1 0 "" NA19240 esv2663496 1 1879774 1880090 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6123431,essv5724864,essv6133148,essv5534277,essv6416178,essv6123824 M 1151 0 6 "" NA18505,NA18868,NA19236,NA19257,NA19469,NA19470 nsv834446 1 1892043 2087874 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444073 M 95 0 1 GABRD,KIAA1751,PRKCZ esv2381744 1 1899196 1899525 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4505691 M 1 0 1 KIAA1751 NA18507 nsv1074477 1 1899386 1899486 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769548 M 1 0 1 KIAA1751 KWP1 nsv1113060 1 1899387 1899486 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967953 M 2 0 1 KIAA1751 KWS2 esv3385175 1 1902192 1902990 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692084 M 185 1 0 KIAA1751 NA19240 dgv43n54 1 1910371 1911217 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545042,nsv545043 M 17421 0 2 KIAA1751 esv25575 1 1910377 1913930 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13192,esv17032,esv21134 M 40 2 20 KIAA1751 NA06985,NA07037,NA11993,NA12044,NA12156,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18505,NA18517,NA18858,NA18861,NA18916,NA19114,NA19147,NA19190,NA19257 nsv545044 1 1910578 1911319 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708640 M 17421 1 0 KIAA1751 esv2668919 1 1911022 1911376 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5966586,essv6114367,essv5908516,essv6155123,essv5427294,essv6043891,essv5826171,essv6000581,essv5942871,essv6098453,essv5940360,essv6156802,essv5935868,essv6153321,essv5513674,essv6060675,essv5953733,essv6527584,essv5769142,essv5983187,essv5959123,essv6104627,essv5640367,essv6189086,essv5430434,essv5999401,essv5674802,essv6255706,essv5706855,essv5995024,essv5417396,essv6058936,essv5571234,essv6033207,essv5788407,essv6198815,essv5675482,essv6348591,essv5440413,essv6458298,essv5660200,essv6587683,essv5776129,essv6515669,essv5685603,essv6234188,essv5894414,essv6201401,essv5492663,essv6379496 M 1151 0 50 KIAA1751 HG00159,HG00319,HG00324,HG00534,HG01047,HG01048,HG01055,HG01079,HG01101,HG01170,HG01250,HG01378,HG01384,HG01437,HG01440,HG01488,HG01492,NA07051,NA07346,NA18486,NA18510,NA18550,NA18552,NA18566,NA18570,NA18577,NA18582,NA18619,NA18934,NA18977,NA19007,NA19313,NA19328,NA19375,NA19376,NA19379,NA19390,NA19391,NA19394,NA19452,NA19712,NA19789,NA20340,NA20341,NA20344,NA20503,NA20540,NA20761,NA20795,NA20803 esv3559676 1 1911607 1911879 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9758423 M 767 0 1 KIAA1751 esv994854 1 1912935 1913740 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586225 M 3 0 1 KIAA1751 HuRef esv1576320 1 1913325 1913325 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4312046 M 2 1 0 KIAA1751 HuRef esv3585019 1 1922946 1924578 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841576,essv9841578,essv9841577 M 2504 0 3 KIAA1751 HG02330,HG03824,NA20506 nsv958160 1 1922983 1924512 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005154 M 1 0 1 KIAA1751 BILGI_BIOE esv1718201 1 1925158 1925158 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4140788 M 2 1 0 KIAA1751 HuRef nsv951425 1 1949601 2043700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997215 M 1 0 1 GABRD,PRKCZ BILGI_BIOE esv3577697 1 1959613 1976788 CNV loss Uddin_et_al_2014 25503493 SNP array essv9782088 M 873 0 1 GABRD 400719TM nsv1143429 1 1981600 1982500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980626 M 2 0 1 PRKCZ KWS1 nsv822920 1 1988267 1990556 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436323 M 31 1 0 PRKCZ NA18542 nsv2520 1 1994733 2021060 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1058 M 9 1 0 PRKCZ NA19240 nsv509479 1 2003750 2108437 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619762,nssv619761 M 4 1 0 PRKCZ NA10860 esv1002714 1 2017029 2017029 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575233 M 3 1 0 PRKCZ HuRef esv1162822 1 2017221 2017221 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3941411 M 2 1 0 PRKCZ HuRef nsv3631 1 2022744 2056952 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7778 M 9 1 0 PRKCZ NA12156 nsv470681 1 2024064 2113565 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547651 M 443 0 1 PRKCZ HGDP00697 esv2668737 1 2024490 2027497 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5950655,essv6231552,essv5797826,essv6396289,essv5892031,essv6422341,essv5690079,essv6423410,essv5420709,essv6564858,essv5817670,essv6295269,essv5886970,essv6574210,essv5502714,essv6315088,essv5668953,essv6255118,essv5681468,essv6220938,essv5562511,essv6229381,essv5657047,essv6085392,essv5894647,essv6479850,essv5597900,essv6566834,essv5900192,essv6154406,essv5586775,essv6028858,essv5828436,essv6308201,essv5500049,essv6474764,essv5521064,essv6249120,essv5636927,essv5592270,essv5633795 M 1151 0 41 PRKCZ NA07051,NA07346,NA07347,NA11829,NA11831,NA11919,NA11992,NA11993,NA12004,NA12044,NA12717,NA12750,NA12751,NA12763,NA12892,NA18486,NA18504,NA18508,NA18516,NA18520,NA18522,NA18523,NA18853,NA18871,NA18953,NA18967,NA18972,NA18974,NA18976,NA18981,NA19107,NA19116,NA19138,NA19144,NA19152,NA19159,NA19172,NA19238,NA19239,NA19240,NA19676 esv27078 1 2024543 2027403 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16667 M 40 0 2 PRKCZ NA18508,NA19240 esv3585020 1 2024547 2027383 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841595,essv9841594,essv9841593,essv9841592,essv9841583,essv9841582,essv9841579,essv9841581,essv9841580,essv9841586,essv9841591,essv9841585,essv9841584,essv9841587,essv9841590,essv9841589,essv9841588,essv9841598,essv9841597,essv9841596 M 2504 0 20 PRKCZ HG02429,HG02479,HG02852,HG02854,HG02974,HG03112,HG03172,HG03267,HG03291,HG03342,HG03366,HG03370,HG03380,HG03517,NA18508,NA18923,NA19107,NA19239,NA19390,NA19676 esv3585021 1 2028833 2052740 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841599 M 2504 0 1 PRKCZ HG00610 esv3585022 1 2028833 2052740 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841600 M 2504 1 0 PRKCZ HG03722 esv4759 1 2037656 2038222 CNV loss Wang_et_al_2008 18987735 Sequencing essv27200 M 1 0 1 PRKCZ YH dgv1e194 1 2037749 2038273 CNV deletion Bentley_et_al_2008 18987734 Sequencing esv2345828,esv1927480 M 1 0 1 PRKCZ NA18507 nsv1121435 1 2037898 2037992 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965435 M 2 0 1 PRKCZ KWS2 nsv1137181 1 2037950 2038113 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3975873 M 2 0 1 PRKCZ KWS1 nsv1074479 1 2037978 2038037 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772448 M 1 0 1 PRKCZ KWP1 nsv1140401 1 2038208 2038267 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3979107 M 2 0 0 PRKCZ KWS2 nsv1122280 1 2038235 2038294 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969733 M 2 0 1 PRKCZ KWS2 nsv160060 1 2038311 2038311 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178638 M 24 PRKCZ nsv460616 1 2040936 2089526 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537157 M 1557 0 1 PRKCZ NINDS_69 nsv545045 1 2040936 2089526 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172578 M 17421 0 1 PRKCZ NINDS_69 esv2196740 1 2041419 2041771 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4845456 M 1 0 1 PRKCZ NA18507 nsv1121436 1 2041553 2041657 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965436 M 2 0 1 PRKCZ KWS2 nsv834557 1 2049070 2242543 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444962,nssv1445073,nssv1445295,nssv1445184,nssv1444851,nssv1444406,nssv1444739,nssv1444184,nssv1444295,nssv1444517,nssv1444628 M 95 0 11 C1orf86,PRKCZ,SKI esv2492368 1 2052521 2053012 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5343806 M 1 1 0 PRKCZ NA18507 esv3388837 1 2052692 2055890 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692102 M 185 1 0 PRKCZ NA19239 esv26913 1 2052961 2055975 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15600,esv18512 M 40 7 20 PRKCZ NA06985,NA07037,NA07045,NA11931,NA12004,NA12006,NA12287,NA12489,NA12828,NA12878,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv821592 1 2052961 2056045 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420402 M 1 0 1 PRKCZ NA10851 nsv951470 1 2053201 2056200 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997226 M 1 0 1 PRKCZ BILGI_BIOE dgv44n54 1 2053205 2055373 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545052,nsv545049,nsv545046,nsv545056 M 17421 0 22 PRKCZ dgv45n54 1 2053205 2055638 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545051,nsv545050,nsv545047,nsv545058,nsv545054,nsv545048 M 17421 18 0 PRKCZ esv2505453 1 2053384 2056112 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5233482 M 1 0 1 PRKCZ NA18507 esv4841 1 2053516 2055933 CNV loss Wang_et_al_2008 18987735 Sequencing essv27282 M 1 0 1 PRKCZ YH dgv46n54 1 2053581 2055501 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545060,nsv545053,nsv545057 M 17421 32 16 PRKCZ nsv1074070 1 2053599 2055600 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772721 M 1 0 1 PRKCZ KWP1 nsv1130941 1 2053600 2055600 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967638 M 2 0 1 PRKCZ KWS2 esv1008133 1 2053623 2055810 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586410 M 3 1 0 PRKCZ HuRef nsv545055 1 2053757 2055250 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708673 M 17421 1 0 PRKCZ dgv47n54 1 2054080 2055501 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545061,nsv545059 M 17421 0 7 PRKCZ esv1138741 1 2054545 2054653 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3618162 M 2 0 1 PRKCZ HuRef nsv545062 1 2054715 2077872 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708737 M 17421 0 1 PRKCZ nsv951471 1 2065601 2070700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997237 M 1 0 1 PRKCZ BILGI_BIOE esv2313378 1 2073716 2074039 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4884634 M 1 0 1 PRKCZ NA18507 esv4294 1 2073731 2073962 CNV loss Wang_et_al_2008 18987735 Sequencing essv26735 M 1 0 1 PRKCZ YH nsv1153893 1 2073814 2073931 CNV deletion John_et_al_2014 26484159 Sequencing nssv4003168 M 1 0 1 PRKCZ KWB1 nsv1075767 1 2077599 2080000 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3767387 M 1 1 0 PRKCZ KWP1 dgv48n54 1 2082489 2182470 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545065,nsv545063 M 17421 0 2 C1orf86,PRKCZ,SKI 1780862101_A nsv461727 1 2082489 2182470 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538084 M 1557 0 1 C1orf86,PRKCZ,SKI 1780862101_A dgv49n54 1 2082489 2221222 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545064,nsv545066 M 17421 0 2 C1orf86,PRKCZ,SKI nsv951530 1 2085101 2161400 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997248 M 1 0 1 C1orf86,PRKCZ,SKI BILGI_BIOE dgv18e59 1 2085992 2087390 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3377460,esv3434245 M 185 2 0 PRKCZ NA19239,NA19240 nsv1113061 1 2087041 2087094 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967954 M 2 0 1 PRKCZ KWS2 nsv470682 1 2119833 2310193 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547654,nssv547652,nssv547657,nssv547653,nssv547655 M 443 0 5 C1orf86,LOC100129534,MORN1,SKI HGDP00288,HGDP00313,HGDP00546,HGDP00657,HGDP00978 nsv1074484 1 2125599 2126400 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3763563 M 1 0 1 C1orf86 KWP1 nsv1112517 1 2125600 2126400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967639,nssv3984397 M 2 0 2 C1orf86 KWS1,KWS2 nsv1075013 1 2136199 2136800 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3768197 M 1 0 1 C1orf86 KWP1 nsv818111 1 2140261 2156362 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417805 M 112 0 1 C1orf86 NA18853 nsv463949 1 2140261 2195117 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539962 M 1557 0 1 C1orf86,SKI 1780862414_A nsv545067 1 2140261 2195117 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172580 M 17421 0 1 C1orf86,SKI 1780862414_A esv3577698 1 2153436 2154569 CNV loss Uddin_et_al_2014 25503493 SNP array essv9782977,essv9783199,essv9782755,essv9782200,essv9783088,essv9782644,essv9782422,essv9782533,essv9782866,essv9782311 M 873 0 10 "" 400002HK,400030WD,400168HC,400686BM,400793BR,401084BD,401414CR,401603HH,401728WK,401806DL nsv834668 1 2155766 2324377 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1448295,nssv1446184,nssv1448628,nssv1447184,nssv1448184,nssv1445628,nssv1449295,nssv1450406,nssv1447073,nssv1447850,nssv1449406,nssv1446073,nssv1447406,nssv1447628,nssv1446961,nssv1449183,nssv1450183,nssv1448850,nssv1448072,nssv1450294,nssv1449961,nssv1450628,nssv1447517,nssv1449850,nssv1445850,nssv1448961,nssv1450072,nssv1450517,nssv1448739,nssv1449517,nssv1446406,nssv1445739,nssv1446295,nssv1445517,nssv1448517,nssv1446517,nssv1447295,nssv1449739,nssv1448406,nssv1446628,nssv1445406,nssv1446850,nssv1445962,nssv1447739,nssv1447961,nssv1449072,nssv1449628,nssv1446739 M 95 0 48 LOC100129534,MORN1,RER1,SKI esv2648351 1 2158465 2160492 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5208944 M 1 0 1 SKI NA18507 dgv13n106 1 2159000 2160100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1143430,nsv1121742 M 2 0 2 "" KWS1,KWS2 nsv1074077 1 2159199 2160100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769049 M 1 0 1 "" KWP1 esv3585023 1 2162106 2163200 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841601 M 2504 0 1 SKI NA18910 esv2673961 1 2162118 2163146 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6191476 M 1151 0 1 SKI NA18910 nsv951531 1 2178801 2186700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997259 M 1 0 1 SKI BILGI_BIOE nsv465060 1 2180524 2220649 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540916 M 1557 0 1 SKI HGDP01351 nsv545068 1 2180524 2220649 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172581 M 17421 0 1 SKI HGDP01351 nsv545069 1 2182470 2222583 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708741 M 17421 1 0 SKI nsv951557 1 2197501 2496100 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997270 M 1 0 1 HES5,LOC100129534,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,SKI,TNFRSF14 BILGI_BIOE nsv528621 1 2199057 2211849 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705251 M 2026 0 1 SKI nsv545070 1 2199057 2231463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708742 M 17421 0 1 SKI nsv545071 1 2204755 2224836 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708743 M 17421 1 0 SKI esv22780 1 2212060 2214175 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20675 M 40 4 10 SKI NA06985,NA11931,NA11993,NA12006,NA12239,NA12287,NA18508,NA18517,NA18523,NA18909,NA18916,NA19108,NA19240,NA19257 esv1252402 1 2212160 2212373 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3979301 M 2 0 1 SKI HuRef esv1536883 1 2212641 2212728 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3775323 M 2 0 1 SKI HuRef esv1025209 1 2212790 2213005 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4025462 M 2 0 1 SKI HuRef esv1682069 1 2213018 2213276 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4061538 M 2 0 1 SKI HuRef esv1164473 1 2213301 2213387 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3589181 M 2 0 1 SKI HuRef nsv823031 1 2234213 2266305 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426364 M 31 1 0 MORN1,SKI AK6 nsv4742 1 2236164 2282202 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8452,nssv1955,nssv5660,nssv3953,nssv10842 M 9 5 0 LOC100129534,MORN1,SKI NA12156,NA12878,NA18555,NA18956,NA19129 dgv4n67 1 2237528 2241980 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv823586,nsv823142,nsv823253,nsv823475 M 31 4 0 SKI AK12,NA18564,NA18951,NA18969 nsv823364 1 2238295 2241002 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437213 M 31 1 0 SKI NA18949 dgv14n106 1 2245900 2246700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1136058,nsv1126169 M 2 0 2 "" KWS1,KWS2 nsv1076878 1 2245999 2246900 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764592 M 1 0 1 "" KWP1 esv2502867 1 2255698 2258249 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5196708 M 1 0 1 MORN1 NA18507 nsv1133791 1 2258582 2258754 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985251,nssv3967955 M 2 0 2 MORN1 KWS1,KWS2 nsv1003233 1 2280423 2335505 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696757 M 29084 1 0 LOC100129534,MORN1,RER1 esv3577699 1 2302911 2320640 CNV loss Uddin_et_al_2014 25503493 SNP array essv9783311 M 873 0 1 MORN1 401011PJ esv3585024 1 2303828 2320328 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841602,essv9841606,essv9841603,essv9841605,essv9841604 M 2504 0 5 MORN1 NA20853,NA20876,NA20911,NA21094,NA21124 nsv520511 1 2307481 2309082 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697462 M 2026 0 1 MORN1 nsv823697 1 2321132 2337358 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426365 M 31 1 0 MORN1,PEX10,RER1 AK6 nsv470684 1 2326009 2847488 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547671,nssv547662,nssv547664,nssv547666,nssv547669,nssv547668,nssv547660,nssv547670,nssv547661,nssv547663,nssv547659,nssv547665,nssv547658 M 443 0 12 FAM213B,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14,TTC34 HGDP00288,HGDP00290,HGDP00302,HGDP00313,HGDP00333,HGDP00546,HGDP00550,HGDP00556,HGDP00657,HGDP00661,HGDP00789,HGDP00978 esv2631918 1 2332252 2333247 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5353074 M 1 1 0 RER1 NA18507 nsv545072 1 2333031 2406887 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708744 M 17421 0 1 PEX10,RER1 dgv1n27 1 2333031 2450394 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467282,nsv466171 M 1557 0 2 PANK4,PEX10,PLCH2,RER1 HGDP00607,HGDP00614 dgv50n54 1 2333031 2450394 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545073,nsv545074 M 17421 0 2 PANK4,PEX10,PLCH2,RER1 HGDP00607,HGDP00614 nsv512710 1 2333226 2333383 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625334 M 1 1 0 RER1 1 nsv823808 1 2334580 2335834 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436324 M 31 1 0 RER1 NA18542 nsv545075 1 2359981 2390204 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708745 M 17421 0 1 "" nsv470685 1 2359981 2450394 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547672 M 443 1 0 PANK4,PLCH2 HGDP00720 nsv545076 1 2359981 2466633 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708746 M 17421 1 0 HES5,PANK4,PLCH2 nsv545077 1 2359981 2553624 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708747 M 17421 1 0 FAM213B,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PLCH2,TNFRSF14 nsv545078 1 2366316 2431057 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172584 M 17421 0 1 PLCH2 HGDP00823 esv2668714 1 2367783 2368009 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5630844,essv6378265,essv5589777,essv6393176,essv5414235,essv6061718,essv5796448,essv6402562,essv5583100,essv6404744,essv5867450,essv6572195,essv5523762,essv6150234,essv5432359,essv6510339,essv5925401,essv6410642,essv5673453,essv6095950,essv5561041,essv6412544,essv5728098,essv6417282,essv5608646,essv6231320,essv5427393,essv6420983,essv5602173,essv6583990,essv5400745,essv6164878,essv5940301,essv6106037,essv5442509,essv6436239,essv5412390,essv6499911,essv5439678,essv6137418,essv5646611,essv6529134,essv5503301,essv6255206,essv5519123,essv6489486,essv5448132,essv6052252,essv5642752,essv6300274,essv5685920,essv6544556,essv5717656,essv6303495,essv5437439,essv6310386,essv5624107,essv6319824,essv5643676,essv5974767,essv5740169,essv6269044,essv5890375,essv6326352,essv5672295,essv6072434,essv5632537,essv6334402,essv5631580,essv6244737,essv5655601,essv6288922,essv5903711,essv6176979,essv5772983,essv6015565,essv5678679,essv6176421,essv5671033,essv6273610,essv5641464,essv6344808,essv5901413,essv6135652,essv5425178,essv5967212,essv5938607,essv6533947,essv5648999,essv6080801,essv5423514,essv6052052,essv5911315,essv6167981,essv5810986,essv6136547,essv5682628,essv6367710,essv5831388,essv6369582,essv5863149,essv6503964,essv5565564,essv6470051,essv5610738,essv6124602,essv5584739,essv6374994,essv5905581,essv6500591,essv5614270,essv6376204,essv5932921,essv6464841,essv5477340,essv6378150,essv5467369,essv6307009,essv5572816,essv6148045,essv5930767,essv6265746,essv5593070,essv6163616,essv5899708,essv6149461,essv5530784,essv5461953,essv5899355 M 1151 0 129 "" HG00125,HG00136,HG00138,HG00139,HG00250,HG00254,HG00275,HG00276,HG00278,HG00281,HG00282,HG00309,HG00310,HG00320,HG00324,HG00325,HG00328,HG00334,HG00336,HG00337,HG00343,HG00375,HG00418,HG00419,HG00422,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00533,HG00534,HG00537,HG00543,HG00583,HG00584,HG00589,HG00590,HG00607,HG00608,HG00613,HG00614,HG00619,HG00620,HG00650,HG00651,HG00653,HG00654,HG00657,HG00663,HG00672,HG00689,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708,HG01052,HG01060,HG01070,HG01083,HG01108,HG01170,HG01171,HG01173,HG01334,HG01350,HG01351,HG01365,HG01390,HG01441,HG01492,NA18530,NA18536,NA18542,NA18543,NA18544,NA18546,NA18548,NA18549,NA18550,NA18557,NA18558,NA18559,NA18561,NA18570,NA18577,NA18582,NA18596,NA18597,NA18599,NA18602,NA18606,NA18610,NA18611,NA18612,NA18613,NA18622,NA18632,NA18637,NA18638,NA18964,NA19371,NA19375,NA19379,NA19381,NA19384,NA19390,NA19394,NA19404,NA19428,NA19720,NA19747 esv3560315 1 2367863 2367990 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9759062 M 767 0 1 "" nsv998482 1 2369498 2458799 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479094 M 29084 0 1 PANK4,PLCH2 esv3444937 1 2371743 2372156 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652069 M 185 1 0 "" NA19240 nsv1129125 1 2371864 2371946 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3961801 M 2 1 0 "" KWS1 esv988545 1 2371950 2372019 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577413 M 3 0 1 "" HuRef dgv3e199 1 2371960 2374338 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2667055,esv2677055 M 1151 0 1 "" NA18574 esv1513739 1 2371997 2371997 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4248036 M 2 1 0 "" HuRef nsv1145306 1 2372093 2372161 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982397 M 2 0 1 "" KWS1 esv3585025 1 2372200 2374164 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841607 M 2504 0 1 "" NA18574 esv3585026 1 2374226 2379823 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841608,essv9841625,essv9841624,essv9841615,essv9841610,essv9841609,essv9841614,essv9841611,essv9841613,essv9841612,essv9841618,essv9841623,essv9841616,essv9841617,essv9841619,essv9841622,essv9841621,essv9841620,essv9841631,essv9841626,essv9841630,essv9841627,essv9841629,essv9841628,essv9841633,essv9841632 M 2504 26 0 "" HG00130,HG00355,HG02087,HG02089,HG02301,HG02318,HG02479,HG02484,HG02485,NA12815,NA18525,NA18640,NA18643,NA18747,NA18749,NA18939,NA18946,NA18957,NA18993,NA19031,NA19035,NA19038,NA19086,NA19141,NA19184,NA19308 esv2758914 1 2376254 2380249 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757718 M 270 0 1 "" NA18508 esv25748 1 2390213 2391302 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12176,esv15167 M 40 0 12 "" NA06985,NA11894,NA12004,NA12239,NA12287,NA18511,NA18858,NA18909,NA18916,NA19129,NA19147,NA19240 nsv545079 1 2390588 2450394 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708748 M 17421 0 1 PANK4,PLCH2 esv3560426 1 2390764 2390988 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9759173 M 767 0 1 "" nsv1147208 1 2390777 2390986 CNV deletion John_et_al_2014 26484159 Sequencing nssv3999979 M 1 0 1 "" KWB1 nsv1121437 1 2390803 2390961 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965437 M 2 0 1 "" KWS2 esv2668467 1 2390806 2391052 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5920836,essv6536705,essv5934369,essv6015336,essv5506006,essv6519149,essv5602357,essv6394630,essv5415337,essv5963925,essv5914838,essv6281611,essv5923266,essv6512160,essv5581589,essv6406748,essv5843562,essv6203532,essv5775590,essv6409825,essv5547485,essv6409874,essv5780323,essv6029442,essv5835922,essv6416104,essv5447025,essv6494753,essv5519074,essv6551632,essv5929017,essv6425849,essv5640198,essv6185226,essv5879513,essv6284888,essv5735619,essv6459378,essv5425402,essv6569569,essv5505273,essv6090639,essv5804372,essv6296062,essv5688839,essv6051290,essv5897044,essv6107284,essv5738711,essv6090319,essv5456432,essv6219456,essv5555656,essv5995244,essv5844195,essv6318976,essv5807802,essv6057652,essv5865427,essv6055830,essv5859906,essv6504100,essv5558047,essv5964575,essv5551104,essv6226517,essv5710726,essv6072856,essv5551336,essv6081812,essv5821058,essv5994541,essv5914379,essv6224671,essv5684887,essv6057284,essv5538311,essv6325270,essv5613929,essv6068947,essv5475603,essv6221066,essv5875862,essv6486007,essv5815536,essv6551924,essv5519029,essv5990143,essv5753449,essv6014555,essv5478507,essv6363664,essv5825375,essv6364378,essv5438814,essv6365388,essv5538854,essv6180823,essv5448530,essv6105477,essv5501976,essv6475241,essv5505829,essv6540434,essv5948931,essv6247847,essv5726242,essv6141211,essv5613982,essv5987314,essv5744948,essv6123846,essv5563893,essv6238640,essv5598418,essv6577821,essv5471300,essv5984136,essv5684170,essv6096498,essv5755072,essv6544336,essv5631318,essv5492017,essv5546308,essv5476099,essv5575722,essv5809808,essv5551010,essv5887270,essv5689636,essv5403060 M 1151 0 132 "" HG00124,HG00125,HG00136,HG00138,HG00139,HG00159,HG00185,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00258,HG00260,HG00261,HG00268,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00310,HG00313,HG00315,HG00318,HG00320,HG00321,HG00323,HG00327,HG00334,HG00335,HG00337,HG00338,HG00339,HG00342,HG00345,HG00346,HG00375,HG00418,HG00419,HG00421,HG00422,HG00427,HG00437,HG00448,HG00476,HG00478,HG00479,HG00500,HG00501,HG00513,HG00524,HG00536,HG00537,HG00543,HG00557,HG00581,HG00584,HG00589,HG00613,HG00650,HG00651,HG00654,HG00662,HG00663,HG00684,HG00690,HG00692,HG00693,HG00699,HG00704,HG00740,HG01048,HG01052,HG01055,HG01060,HG01061,HG01066,HG01069,HG01070,HG01080,HG01082,HG01083,HG01101,HG01102,HG01107,HG01170,HG01171,HG01204,HG01334,HG01350,HG01353,HG01357,HG01374,HG01375,HG01390,HG01440,HG01441,HG01462,HG01488,NA12003,NA18532,NA18542,NA18543,NA18549,NA18557,NA18566,NA18570,NA18572,NA18596,NA18597,NA18599,NA18610,NA18613,NA18621,NA18623,NA18624,NA18633,NA18636,NA18964,NA19257,NA19372,NA19374,NA19379,NA19770,NA20543 esv989190 1 2393688 2393688 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583245 M 3 1 0 "" HuRef esv1307242 1 2393777 2393777 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3609131 M 2 1 0 "" HuRef nsv545080 1 2395452 2485433 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708749 M 17421 0 1 HES5,LOC115110,PANK4,PLCH2 esv3585028 1 2397655 2401469 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841727,essv9841726,essv9841725,essv9841724,essv9841658,essv9841723,essv9841640,essv9841657,essv9841634,essv9841639,essv9841635,essv9841638,essv9841637,essv9841636,essv9841642,essv9841647,essv9841656,essv9841641,essv9841646,essv9841643,essv9841645,essv9841644,essv9841650,essv9841655,essv9841649,essv9841648,essv9841651,essv9841654,essv9841653,essv9841652,essv9841689,essv9841672,essv9841663,essv9841660,essv9841659,essv9841662,essv9841661,essv9841722,essv9841666,essv9841664,essv9841671,essv9841665,essv9841670,essv9841667,essv9841669,essv9841668,essv9841674,essv9841679,essv9841673,essv9841688,essv9841678,essv9841675,essv9841677,essv9841676,essv9841682,essv9841687,essv9841681,essv9841680,essv9841683,essv9841686,essv9841685,essv9841684,essv9841695,essv9841704,essv9841721,essv9841691,essv9841694,essv9841690,essv9841693,essv9841692,essv9841703,essv9841698,essv9841697,essv9841696,essv9841702,essv9841699,essv9841701,essv9841700,essv9841706,essv9841705,essv9841711,essv9841720,essv9841710,essv9841707,essv9841709,essv9841708,essv9841714,essv9841719,essv9841713,essv9841712,essv9841715,essv9841718,essv9841717,essv9841716,essv9841729,essv9841728 M 2504 96 0 "" HG00097,HG00099,HG00128,HG00130,HG00234,HG00350,HG00355,HG00437,HG00982,HG01344,HG01345,HG01626,HG01630,HG01880,HG01915,HG02002,HG02060,HG02082,HG02084,HG02087,HG02089,HG02090,HG02104,HG02134,HG02138,HG02139,HG02140,HG02141,HG02277,HG02278,HG02285,HG02301,HG02479,HG02484,HG02485,HG02497,HG02508,NA12812,NA12872,NA12874,NA18574,NA18640,NA18642,NA18643,NA18645,NA18647,NA18745,NA18748,NA18749,NA18757,NA18979,NA19007,NA19028,NA19031,NA19035,NA19041,NA19068,NA19086,NA19096,NA19121,NA19149,NA19184,NA19307,NA19308,NA19309,NA19310,NA19314,NA19316,NA19338,NA19346,NA19350,NA19355,NA19376,NA19397,NA19401,NA19438,NA19466,NA19625,NA19663,NA19703,NA19734,NA19735,NA19740,NA19794,NA19916,NA19920,NA19923,NA19984,NA20298,NA20339,NA21106,NA21107,NA21108,NA21109,NA21112,NA21119 nsv545081 1 2406887 2446880 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172585 M 17421 0 1 PANK4,PLCH2 HGDP01048 nsv823920 1 2413744 2483841 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440793 M 31 1 0 HES5,LOC115110,PANK4,PLCH2 NA18969 nsv818222 1 2424122 2485433 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417806,nssv1417514 M 112 0 2 HES5,LOC115110,PANK4,PLCH2 NA18853,NA18968 nsv7171 1 2443998 2538071 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10880,nssv10864,nssv4052,nssv9287,nssv5743,nssv4140,nssv2141,nssv6533,nssv9849,nssv9802,nssv5821,nssv2047,nssv1241,nssv1153,nssv6621,nssv10990 M 9 0 0 FAM213B,HES5,LOC100133445,LOC115110,MMEL1,PANK4,TNFRSF14 NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv1122281 1 2450828 2450884 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969734 M 2 0 1 PANK4 KWS2 nsv824031 1 2452239 2483097 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426366 M 31 1 0 HES5,LOC115110,PANK4 AK6 esv2583485 1 2453635 2454448 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5387623 M 1 1 0 PANK4 NA18507 nsv1119397 1 2454096 2454189 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3959839 M 2 1 0 PANK4 KWS1 dgv15n106 1 2454148 2454255 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1133123,nsv1125448 M 2 0 0 PANK4 KWS1,KWS2 esv3402792 1 2454213 2454431 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652074 M 185 1 0 PANK4 NA19240 nsv1126965 1 2454224 2454290 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985252 M 2 0 1 PANK4 KWS1 esv1165961 1 2454255 2454255 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3796592 M 2 1 0 PANK4 HuRef nsv1145307 1 2454311 2454376 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982398 M 2 0 1 PANK4 KWS1 nsv1116581 1 2454376 2454441 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3978763 M 2 0 0 PANK4 KWS2 nsv1 1 2456590 2485433 OTHER inversion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv1 M 1 0 0 HES5,LOC115110,PANK4 NA15510 nsv545082 1 2467670 2528682 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708750 M 17421 0 1 FAM213B,LOC100133445,LOC115110,MMEL1,TNFRSF14 nsv436691 1 2485434 2497301 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466250 M 2 0 0 LOC100133445,TNFRSF14 NA18505 esv3447351 1 2485434 2498910 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808959 M 185 0 0 LOC100133445,TNFRSF14 NA12878 dgv1n47 1 2485434 2499127 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nsv499113,nsv499569,nsv499637 M 9 0 0 LOC100133445,TNFRSF14 dgv1n50 1 2485434 2499127 OTHER inversion Arlt_et_al_2011 21212237 Sequencing,SNP array nsv513633,nsv513632 M 1 0 0 LOC100133445,TNFRSF14 1 esv1699286 1 2485434 2499127 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4270452 M 2 0 0 LOC100133445,TNFRSF14 HuRef esv2471749 1 2485434 2499127 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5165573 M 1 0 0 LOC100133445,TNFRSF14 NA18507 nsv824475 1 2493012 2493455 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431952 M 31 0 1 TNFRSF14 NA18972 nsv824364 1 2493012 2494114 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434859 M 31 0 1 TNFRSF14 NA18942 nsv951592 1 2496301 2545400 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997281 M 1 0 1 FAM213B,MMEL1 BILGI_BIOE dgv5n67 1 2496335 2497984 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824253,nsv824142 M 31 0 2 "" AK20,NA18972 nsv829648 1 2499128 2572340 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450739 M 95 0 1 FAM213B,MMEL1 esv3582248 1 2501338 2567987 CNV gain Uddin_et_al_2014 25503493 SNP array essv9783422 M 873 1 0 FAM213B,MMEL1 401288LD nsv545083 1 2507415 2584538 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708751 M 17421 1 0 FAM213B,MMEL1,TTC34 nsv1136059 1 2523700 2524100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989664 M 2 0 1 MMEL1 KWS2 esv3585029 1 2524546 2527727 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841730 M 2504 0 1 MMEL1 HG04225 nsv1144338 1 2531202 2531267 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995082 M 2 0 1 MMEL1 KWS1 nsv428399 1 2553978 3152490 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv452575 M 62 1 0 ACTRT2,LINC00982,MIR4251,MMEL1,PRDM16,TTC34 HGDP00450 nsv951593 1 2559501 2577400 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997292 M 1 0 1 MMEL1,TTC34 BILGI_BIOE dgv19e59 1 2561592 2562790 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3368203,esv3399585 M 185 2 0 MMEL1 NA19239,NA19240 esv21805 1 2565924 2634182 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12016,esv21190,esv18116,esv12824,esv12744,esv16589 M 40 23 8 TTC34 NA06985,NA07037,NA07045,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510,NA18502,NA18508,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19190,NA19225,NA19240 nsv511152 1 2566002 2566482 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626021 M 1 0 1 "" 1 esv1931226 1 2566029 2566723 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4612274 M 1 0 1 "" NA18507 esv2669821 1 2566195 2566623 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6558785,essv5415958,essv6394674,essv5558599,essv6162007,essv5972540,essv6541573,essv5607775,essv6230234,essv5433007,essv6088009,essv5713670,essv6517570,essv5462610,essv6489999,essv5790573,essv6431904,essv5552992,essv6090582,essv5601616,essv6068516,essv5711594,essv6443064,essv5517716,essv6115352,essv5759687,essv5997909,essv5483427,essv6059728,essv5471160,essv6451395,essv5788468,essv6217295,essv5936146,essv6041178,essv5816058,essv6083878,essv5679435,essv6488723,essv5716031,essv6081713,essv5608652,essv6132494,essv5752773,essv6169758,essv5938131,essv6169480,essv5814263,essv6594080,essv5980680,essv6520633,essv5693082,essv6273379,essv5522908,essv6328384,essv5861950,essv6289413,essv5546957,essv6331001,essv5842808,essv6034164,essv5411742,essv6109200,essv5639073,essv6025747,essv5900200,essv6160881,essv5946004,essv6237014,essv5655408,essv6568242,essv5796693,essv6339798,essv5702203,essv6526087,essv5838103,essv6078969,essv5539969,essv6144433,essv5501129,essv6351205,essv5774401,essv6204263,essv5463132,essv6519108,essv5481367,essv6483210,essv5659713,essv6588197,essv5484855,essv6016573,essv5884891,essv6075008,essv5741752,essv6363573,essv5837505,essv6363658,essv5568489,essv6368487,essv5690458,essv6039374,essv5666396,essv6370619,essv5721497,essv6000041,essv5502647,essv6376974,essv5771945,essv6090000,essv5897265,essv6529647,essv6521997,essv6393770 M 1151 0 113 "" HG00100,HG00103,HG00108,HG00111,HG00112,HG00123,HG00133,HG00136,HG00137,HG00152,HG00174,HG00180,HG00232,HG00236,HG00237,HG00243,HG00250,HG00275,HG00284,HG00285,HG00313,HG00328,HG00331,HG00336,HG00342,HG00346,HG00369,HG00478,HG00512,HG00543,HG00610,HG00613,HG00654,HG00684,HG00692,HG00693,HG00704,HG00734,HG01047,HG01055,HG01066,HG01069,HG01082,HG01124,HG01134,HG01136,HG01140,HG01334,HG01354,HG01356,HG01359,HG01441,HG01461,HG01521,NA07051,NA11930,NA12154,NA12282,NA12717,NA12748,NA12778,NA12829,NA12830,NA18489,NA18520,NA18542,NA18550,NA18566,NA18579,NA18612,NA18616,NA19093,NA19102,NA19130,NA19213,NA19313,NA19315,NA19317,NA19331,NA19372,NA19377,NA19394,NA19399,NA19403,NA19438,NA19439,NA19443,NA19455,NA19463,NA19468,NA19625,NA19663,NA19675,NA19676,NA19678,NA19685,NA19703,NA19818,NA19920,NA20299,NA20332,NA20341,NA20356,NA20516,NA20525,NA20530,NA20582,NA20757,NA20768,NA20778,NA20795,NA20818,NA20819 esv3560981 1 2566218 2566635 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9759728 M 767 0 1 "" esv1624207 1 2566517 2566517 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4164733 M 2 1 0 "" HuRef esv994553 1 2572467 2584079 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565426 M 3 1 0 TTC34 HuRef nsv824586 1 2580468 2583441 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1438579 M 31 1 0 TTC34 NA18973 nsv1149955 1 2581299 2634200 CNV duplication John_et_al_2014 26484159 Sequencing nssv3998741 M 1 1 0 TTC34 KWB1 dgv16n106 1 2581400 2634200 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1132276,nsv1124558 M 2 2 0 TTC34 KWS1,KWS2 nsv545084 1 2582041 2586303 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708752 M 17421 0 1 TTC34 nsv545085 1 2582340 2586303 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708753 M 17421 1 0 TTC34 nsv161117 1 2583029 2583595 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179695 M 24 TTC34 dgv20e59 1 2583092 2634190 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3380852,esv3450152,esv3414646,esv3429744,esv3350831,esv3435510 M 185 6 0 TTC34 NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv1122282 1 2583461 2583511 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967956,nssv3995083 M 2 0 2 TTC34 KWS1,KWS2 nsv1075768 1 2583499 2631900 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3772286 M 1 1 0 TTC34 KWP1 nsv951028 1 2583501 2587500 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997303 M 1 1 0 TTC34 BILGI_BIOE dgv1n6 1 2583559 2591089 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv160392,nsv160178 M 24 TTC34 esv1381913 1 2583570 2583570 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4214883 M 2 1 0 TTC34 HuRef nsv820462 1 2583600 2634182 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420513 M 1 1 0 TTC34 NA10851 nsv160953 1 2583700 2584300 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179531 M 24 TTC34 nsv1076882 1 2583790 2629372 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764396 M 1 0 1 TTC34 KWP1 dgv1e215 1 2583806 2627977 CNV deletion Boomsma_et_al_2014 23714750 Sequencing esv3561093,esv3561204 M 767 0 2 TTC34 dgv17n106 1 2583869 2626376 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1120226,nsv1130627,nsv1108895 M 2 0 2 TTC34 KWS1,KWS2 nsv160689 1 2583932 2584533 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179267 M 24 TTC34 esv999533 1 2584227 2585069 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568762 M 3 0 1 TTC34 HuRef nsv159794 1 2584646 2586332 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178372 M 24 TTC34 nsv1116582 1 2584706 2585081 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3983622,nssv3962907 M 2 0 0 TTC34 KWS1,KWS2 nsv159997 1 2584875 2585035 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178575 M 24 TTC34 nsv1137717 1 2585064 2586308 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990218 M 2 0 1 TTC34 KWS2 nsv160053 1 2585307 2585307 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178631 M 24 TTC34 dgv4e199 1 2585445 2587423 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2668155,esv2657692 M 1151 0 2 TTC34 NA18616,NA19223 nsv1142047 1 2585469 2585549 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987941,nssv3978764 M 2 0 0 TTC34 KWS1,KWS2 esv8624 1 2585635 2629436 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31065 M 1 0 0 TTC34 nsv1133124 1 2585811 2590064 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987942 M 2 0 0 TTC34 KWS1 dgv5e199 1 2586186 2616318 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2659426,esv2662334,esv2674419 M 1151 0 8 TTC34 HG00635,HG01516,NA12399,NA18943,NA18982,NA19085,NA19756,NA19780 nsv545086 1 2586303 2613462 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708754 M 17421 0 1 TTC34 dgv51n54 1 2586303 2627467 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545088,nsv545090,nsv545091,nsv545087,nsv545089 M 17421 0 5 TTC34 esv1995006 1 2587683 2609385 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4845344 M 1 0 1 TTC34 NA18507 esv999575 1 2587780 2620255 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575600 M 3 0 1 TTC34 HuRef nsv1122283 1 2587800 2587880 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969735 M 2 0 1 TTC34 KWS2 nsv5853 1 2589270 2614433 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9998,nssv5901 M 9 2 0 TTC34 NA18956,NA19129 esv1159004 1 2593247 2593247 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3785302 M 2 1 0 TTC34 HuRef esv1780740 1 2593705 2593786 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4117042 M 2 0 1 TTC34 HuRef esv1286791 1 2593876 2593956 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3745617 M 2 0 1 TTC34 HuRef esv1001627 1 2593895 2594777 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584427 M 3 0 1 TTC34 HuRef esv1366162 1 2595413 2595493 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3788684 M 2 0 1 TTC34 HuRef esv1701153 1 2595518 2595757 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4138724 M 2 0 1 TTC34 HuRef esv990905 1 2596753 2606586 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573398 M 3 0 1 TTC34 HuRef esv1348726 1 2596826 2596826 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4133439 M 2 1 0 TTC34 HuRef esv992616 1 2596961 2601374 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581681 M 3 0 1 TTC34 HuRef esv1068112 1 2597548 2597548 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3882975 M 2 1 0 TTC34 HuRef esv1134902 1 2598419 2598499 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3644540 M 2 0 1 TTC34 HuRef esv1460747 1 2599458 2599578 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3860280 M 2 0 1 TTC34 HuRef esv1312498 1 2600237 2600477 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4349278 M 2 0 1 TTC34 HuRef esv997173 1 2601369 2601930 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566822 M 3 0 1 TTC34 HuRef esv1162144 1 2602836 2603358 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3966245 M 2 0 1 TTC34 HuRef esv1394797 1 2604440 2604521 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4279125 M 2 0 1 TTC34 HuRef nsv160294 1 2604481 2609056 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178872 M 24 TTC34 esv1779754 1 2605181 2605181 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3803937 M 2 1 0 TTC34 HuRef esv2672332 1 2609210 2626391 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5654815,essv5828566 M 1151 0 2 TTC34 HG00313,NA19380 esv993173 1 2609759 2610320 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584575 M 3 0 1 TTC34 HuRef nsv159383 1 2610568 2616269 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177961 M 24 TTC34 esv989273 1 2611513 2614402 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575900 M 3 0 1 TTC34 HuRef nsv545092 1 2614568 2633298 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708760 M 17421 1 0 TTC34 esv6961 1 2615507 2629275 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29402 M 1 0 0 TTC34 nsv159584 1 2616455 2616815 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178162 M 24 TTC34 nsv6964 1 2616765 2618184 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6711 M 9 1 0 TTC34 NA12156 nsv160877 1 2617977 2623639 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179455 M 24 TTC34 nsv7534 1 2618520 2621299 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4235 M 9 1 0 TTC34 NA12878 esv2663943 1 2618820 2626257 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6025078 M 1151 0 1 TTC34 NA18486 nsv160247 1 2620307 2622675 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178825 M 24 TTC34 nsv1116583 1 2620916 2622963 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3978765 M 2 0 0 TTC34 KWS2 nsv160029 1 2622815 2628837 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178607 M 24 TTC34 nsv160879 1 2623117 2625882 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179457 M 24 TTC34 nsv159137 1 2623263 2623383 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177715 M 24 TTC34 nsv160272 1 2623929 2633004 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178850 M 24 TTC34 nsv160341 1 2626290 2627173 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178919 M 24 TTC34 nsv545093 1 2627023 2631653 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708761 M 17421 1 0 TTC34 esv6481 1 2629935 2630539 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28922 M 1 0 0 TTC34 esv1095177 1 2632561 2632561 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3698632 M 2 1 0 TTC34 HuRef nsv160000 1 2632791 2632990 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178578 M 24 TTC34 nsv159461 1 2633264 2634106 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178039 M 24 TTC34 esv23086 1 2684255 2694960 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19931,esv10077 M 40 12 2 TTC34 NA07037,NA12287,NA12489,NA18502,NA18508,NA18517,NA18858,NA18861,NA18907,NA18909,NA19099,NA19190,NA19225,NA19240 nsv821258 1 2684255 2695040 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420624 M 1 1 0 TTC34 NA10851 nsv1151057 1 2684299 2693800 CNV duplication John_et_al_2014 26484159 Sequencing nssv4001989 M 1 1 0 TTC34 KWB1 esv3585031 1 2684305 2719507 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841897,essv9841893,essv9841892,essv9841891,essv9841890,essv9841894,essv9841895,essv9841896,essv9841899,essv9841898 M 2504 10 0 TTC34 HG01063,HG02256,HG02308,HG02315,HG03224,HG03303,HG03363,NA19042,NA19834,NA20348 nsv545094 1 2684502 2691265 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708762 M 17421 1 0 TTC34 dgv21e59 1 2685192 2692090 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330891,esv3418717,esv3419182,esv3448150,esv3409631,esv3347403 M 185 6 0 TTC34 NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv1128583 1 2685700 2689900 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960494 M 2 1 0 TTC34 KWS1 nsv1115330 1 2685700 2693800 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976382 M 2 1 0 TTC34 KWS2 nsv1077280 1 2687399 2693800 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3770110 M 1 1 0 TTC34 KWP1 nsv1151032 1 2689234 2689372 CNV deletion John_et_al_2014 26484159 Sequencing nssv4001965 M 1 0 1 TTC34 KWB1 esv1006680 1 2689524 2689683 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585900 M 3 0 1 TTC34 HuRef esv1125194 1 2690111 2691077 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4352306 M 2 0 1 TTC34 HuRef esv3585032 1 2693016 2697186 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841900 M 2504 0 1 TTC34 HG00404 esv2661153 1 2693029 2697101 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6292297 M 1151 0 1 TTC34 HG00404 dgv11n100 1 2694433 3267337 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1010228,nsv1010950 M 29084 2 0 ACTRT2,LINC00982,MIR4251,PRDM16,TTC34 esv3583359 1 2694517 3202884 CNV gain Uddin_et_al_2014 25503493 SNP array essv9783644 M 873 1 0 ACTRT2,LINC00982,MIR4251,PRDM16,TTC34 401842BJ esv3892858 1 2700372 2878366 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788249,essv25788252 M 3017 2 0 TTC34 nsv474526 1 2711565 2711565 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019475 M 9 1 0 "" NA18956 nsv951075 1 2713001 2752400 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997353 M 1 0 1 "" BILGI_BIOE dgv12n100 1 2713327 2868072 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009684,nsv997701,nsv1009581,nsv998848,nsv1004395 M 29084 9 0 "" nsv1075948 1 2714499 2715700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3765668 M 1 0 1 "" KWP1 esv3363378 1 2736692 2736990 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692269 M 185 1 0 "" NA19239 nsv469835 1 2740701 2922551 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1675009 M 265 0 1 "" nsv1144339 1 2757426 2757479 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995084 M 2 0 1 "" KWS1 nsv1150123 1 2765887 2765967 CNV insertion John_et_al_2014 26484159 Sequencing nssv3998914 M 1 1 0 "" KWB1 esv2455629 1 2765957 2766825 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5201421 M 1 1 0 "" NA18507 esv1778376 1 2766029 2766029 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3921204 M 2 1 0 "" HuRef nsv951916 1 2767401 2908200 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2998256 M 1 0 1 "" BILGI_BIOE esv2606115 1 2768287 2769751 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5324371 M 1 0 1 "" NA18507 esv1145877 1 2768645 2768645 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4076825 M 2 1 0 "" HuRef nsv455662 1 2769542 2829551 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv533180 M 1557 0 1 "" HGDP00515 nsv545095 1 2769542 2829551 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172586 M 17421 0 1 "" HGDP00515 esv1008548 1 2772784 2776125 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564145 M 3 1 0 "" HuRef nsv1010795 1 2775170 2851238 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472022 M 29084 1 0 "" dgv19n106 1 2775798 2775886 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1121064,nsv1134960 M 2 0 2 "" KWS1,KWS2 nsv1075951 1 2775801 2775880 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769967 M 1 0 1 "" KWP1 esv3561426 1 2775802 2775880 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9760173 M 767 0 1 "" nsv521946 1 2787093 2789108 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694715 M 2026 0 1 "" nsv1133793 1 2789580 2789632 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969363 M 2 0 1 "" KWS2 esv2676249 1 2812693 2813200 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6584383 M 1151 0 1 "" NA18522 dgv22e59 1 2812792 2814090 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3335313,esv3450928,esv3390986 M 185 3 0 "" NA19238,NA19239,NA19240 esv3561537 1 2813548 2813618 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9760284 M 767 0 1 "" nsv1137718 1 2826511 2826596 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990219 M 2 0 1 "" KWS2 dgv23e59 1 2831992 2833190 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3336132,esv3350598 M 185 2 0 "" NA19239,NA19240 nsv159525 1 2837836 2837903 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178103 M 24 "" esv3585033 1 2847963 2898365 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841901 M 2504 1 0 "" HG01063 esv3585034 1 2848661 2850131 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841902 M 2504 0 1 "" HG03803 dgv24e59 1 2860792 2862190 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3337021,esv3422535 M 185 2 0 "" NA19239,NA19240 esv1009726 1 2866138 2866284 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577776 M 3 0 1 "" HuRef esv1533261 1 2866372 2866519 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4287368 M 2 0 1 "" HuRef esv2132425 1 2876448 2876895 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4889243 M 1 0 1 "" NA18507 nsv1121438 1 2876495 2876558 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965438 M 2 0 1 "" KWS2 esv3109 1 2876559 2876831 CNV loss Wang_et_al_2008 18987735 Sequencing essv25550 M 1 0 1 "" YH nsv1074094 1 2876574 2876782 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771875 M 1 0 1 "" KWP1 esv993932 1 2876594 2876713 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566726 M 3 0 1 "" HuRef esv1703346 1 2876601 2876721 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3656039 M 2 0 1 "" HuRef nsv954197 1 2876640 2876738 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000491 M 1 0 1 "" BILGI_BIOE nsv1140732 1 2876652 2876834 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3992239 M 2 0 1 "" KWS1 nsv1145308 1 2881743 2881813 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982399 M 2 0 1 "" KWS1 nsv470686 1 2889577 2984087 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547673 M 443 0 1 ACTRT2,LINC00982 HGDP00978 esv2671460 1 2891195 2891328 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5487623,essv6329559,essv5476303,essv5724554,essv5920819,essv5773475 M 1151 0 6 "" HG00344,HG01497,NA18519,NA19138,NA19371,NA19428 esv25503 1 2892794 2894919 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21208 M 40 0 2 "" NA12006,NA18907 nsv545096 1 2892959 2894506 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708764,nssv708763 M 17421 2 0 "" nsv1129126 1 2897521 2897611 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3961802 M 2 1 0 "" KWS1 nsv545097 1 2909170 2919222 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708765 M 17421 0 1 "" esv7294 1 2911318 2912034 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29735 M 1 0 0 "" esv4855 1 2911490 2911934 CNV loss Wang_et_al_2008 18987735 Sequencing essv27296 M 1 0 1 "" YH esv2667586 1 2911536 2911850 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5935603,essv6382314,essv5592265,essv6508860,essv5697903,essv6057477,essv5447744,essv6386313,essv5777985,essv6390027,essv5429758,essv6390650,essv5878194,essv6166535,essv5428152,essv6471882,essv5447805,essv6488904,essv5531187,essv6233318,essv5893770,essv6215307,essv5431123,essv6553706,essv5904263,essv6135267,essv5726003,essv6500485,essv5912437,essv6035403,essv5597447,essv6088168,essv5631767,essv5965992,essv5558327,essv6407852,essv5712060,essv6409577,essv5907508,essv6567925,essv5589478,essv6059076,essv5890825,essv6525387,essv5865000,essv6414549,essv5716623,essv6097870,essv5673315,essv6003240,essv5717642,essv6416709,essv5469348,essv6503602,essv5899267,essv6418922,essv5856810,essv6503607,essv5778444,essv6501274,essv5800077,essv6507030,essv5693233,essv5965560,essv5504884,essv6423304,essv5435936,essv6424164,essv5741322,essv6288601,essv5643554,essv6425321,essv5898796,essv6426326,essv5688414,essv5962761,essv5826988,essv6427134,essv5642245,essv6427320,essv5750076,essv6462531,essv5490928,essv6430296,essv5928482,essv6059706,essv5572191,essv6248812,essv5875505,essv6435010,essv5514647,essv6062470,essv5803288,essv6017543,essv5490976,essv6085222,essv5650561,essv6027374,essv5656032,essv6444118,essv5672362,essv6444702,essv5701034,essv5966983,essv5684112,essv6016530,essv5564212,essv6531586,essv5857475,essv6448555,essv5704851,essv6451584,essv5912479,essv6452183,essv5895777,essv6453170,essv5522431,essv6453260,essv5614234,essv6453878,essv5454994,essv6455744,essv5778612,essv6455860,essv5673991,essv6192928,essv5639321,essv6496876,essv5866133,essv5985580,essv5529389,essv6096167,essv5893861,essv6023067,essv5599481,essv6282062,essv5786723,essv6029670,essv5921357,essv5979194,essv5771748,essv5951358,essv5647612,essv6592379,essv5489245,essv6043574,essv5432275,essv6164704,essv5486533,essv6061978,essv5469481,essv6296610,essv5502157,essv6240356,essv5572810,essv6071298,essv5896668,essv6090651,essv5761784,essv6009364,essv5642484,essv6548915,essv5458624,essv6566499,essv5637052,essv6139442,essv5612072,essv5945472,essv5577290,essv6074675,essv5794795,essv6302425,essv5719839,essv6303278,essv5404463,essv6303811,essv5910785,essv6304212,essv5536256,essv6282586,essv5634505,essv6304341,essv5843227,essv6304368,essv5584890,essv6557510,essv5629229,essv6500333,essv5906920,essv6064594,essv5624718,essv6079485,essv5729242,essv6499626,essv5824283,essv6316689,essv5551330,essv5954480,essv5443311,essv5982590,essv5731720,essv6594821,essv5708533,essv6239650,essv5677856,essv6069551,essv5433339,essv6200401,essv5788490,essv6320529,essv5414557,essv6320741,essv5827690,essv6020974,essv5869052,essv6576278,essv5720133,essv6028525,essv5647681,essv6123083,essv5477946,essv6577574,essv5399971,essv6250047,essv5507776,essv6546084,essv5858963,essv6324571,essv5774344,essv6325314,essv5929203,essv6195869,essv5691787,essv6150955,essv5891034,essv6079552,essv5841860,essv6141935,essv5599535,essv6496407,essv5924521,essv6329132,essv5685298,essv6138939,essv5725070,essv6124274,essv5755211,essv6567597,essv5575340,essv6208177,essv5719282,essv6112486,essv5691096,essv6129225,essv5447486,essv6158664,essv5596378,essv6178123,essv5758043,essv6583551,essv5671053,essv6476173,essv5636136,essv6494449,essv5708654,essv6124221,essv5633640,essv6028850,essv5699555,essv5944221,essv5461812,essv5995042,essv5435381,essv6484674,essv5831713,essv5996953,essv5574767,essv5997269,essv5509926,essv6286314,essv5557036,essv6535176,essv5474192,essv6107651,essv5580301,essv6345432,essv5480759,essv6472809,essv5701686,essv6285915,essv5543551,essv6174985,essv5915770,essv6347902,essv5553306,essv5957593,essv5742756,essv6474271,essv5512415,essv6056868,essv5792620,essv6231796,essv5554599,essv6517932,essv5522718,essv6289370,essv5778284,essv6278895,essv5752055,essv6289495,essv5500985,essv6352766,essv5918835,essv5969130,essv5856474,essv6459210,essv5539004,essv6287666,essv5432906,essv6083586,essv5929348,essv6357511,essv5489110,essv6358698,essv5855943,essv6584130,essv5465497,essv6568335,essv5600500,essv6359035,essv5414063,essv6533516,essv5530400,essv6589446,essv5717384,essv6360480,essv5714971,essv6474145,essv5661341,essv6087893,essv5614898,essv5997070,essv5913453,essv6570143,essv5476202,essv6047266,essv6283295,essv6232842,essv6365732,essv6501835,essv6366191,essv6103358,essv6540235,essv6051652,essv6276334,essv6010568,essv6370344,essv6120270,essv6505896,essv6371236,essv6025859,essv6560103,essv6181482,essv6511759,essv6223844,essv6374716,essv6153588,essv6075567,essv6178908,essv6089632,essv6382925,essv6150690,essv5994376,essv6182430,essv6081983,essv6277988,essv6193962,essv6188176,essv6041414,essv6386009,essv6393805 M 1151 0 381 "" HG00137,HG00140,HG00154,HG00159,HG00179,HG00237,HG00249,HG00252,HG00254,HG00258,HG00271,HG00285,HG00313,HG00335,HG00345,HG00373,HG00421,HG00436,HG00437,HG00442,HG00448,HG00449,HG00472,HG00475,HG00476,HG00478,HG00479,HG00512,HG00524,HG00525,HG00531,HG00533,HG00534,HG00542,HG00543,HG00557,HG00566,HG00583,HG00590,HG00608,HG00610,HG00625,HG00628,HG00629,HG00654,HG00662,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00699,HG00705,HG00707,HG00708,HG00732,HG00734,HG00736,HG01069,HG01075,HG01079,HG01083,HG01101,HG01108,HG01167,HG01170,HG01190,HG01204,HG01254,HG01334,HG01350,HG01351,HG01354,HG01357,HG01360,HG01366,HG01374,HG01378,HG01384,HG01465,HG01488,HG01491,HG01515,NA06986,NA06994,NA07048,NA07347,NA11829,NA11830,NA11831,NA11894,NA11918,NA11920,NA11933,NA11994,NA12043,NA12155,NA12249,NA12282,NA12287,NA12348,NA12383,NA12414,NA12489,NA12716,NA12717,NA12750,NA12761,NA12776,NA12813,NA12827,NA12878,NA12891,NA18488,NA18498,NA18502,NA18504,NA18505,NA18508,NA18510,NA18516,NA18517,NA18520,NA18523,NA18526,NA18530,NA18532,NA18534,NA18537,NA18539,NA18541,NA18542,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18555,NA18557,NA18558,NA18559,NA18560,NA18561,NA18562,NA18563,NA18564,NA18566,NA18572,NA18573,NA18574,NA18577,NA18579,NA18582,NA18592,NA18596,NA18597,NA18599,NA18603,NA18605,NA18606,NA18608,NA18609,NA18611,NA18612,NA18613,NA18614,NA18615,NA18617,NA18618,NA18619,NA18621,NA18622,NA18623,NA18627,NA18630,NA18632,NA18634,NA18853,NA18856,NA18858,NA18861,NA18868,NA18870,NA18907,NA18909,NA18910,NA18916,NA18917,NA18924,NA18940,NA18941,NA18942,NA18944,NA18945,NA18947,NA18951,NA18953,NA18960,NA18961,NA18964,NA18965,NA18967,NA18968,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18981,NA18982,NA18985,NA18986,NA18987,NA18990,NA18991,NA19005,NA19010,NA19054,NA19055,NA19065,NA19066,NA19072,NA19098,NA19099,NA19102,NA19107,NA19108,NA19114,NA19119,NA19129,NA19130,NA19131,NA19138,NA19144,NA19147,NA19152,NA19153,NA19159,NA19160,NA19171,NA19172,NA19189,NA19190,NA19197,NA19198,NA19200,NA19201,NA19204,NA19207,NA19209,NA19210,NA19223,NA19236,NA19238,NA19239,NA19240,NA19257,NA19311,NA19312,NA19313,NA19316,NA19318,NA19319,NA19321,NA19327,NA19328,NA19331,NA19332,NA19334,NA19338,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19401,NA19403,NA19404,NA19428,NA19429,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19455,NA19457,NA19461,NA19466,NA19467,NA19468,NA19469,NA19471,NA19472,NA19473,NA19474,NA19625,NA19654,NA19663,NA19670,NA19700,NA19701,NA19703,NA19704,NA19711,NA19712,NA19713,NA19716,NA19720,NA19722,NA19726,NA19732,NA19747,NA19776,NA19779,NA19780,NA19782,NA19818,NA19834,NA19835,NA19909,NA19914,NA19917,NA19920,NA19982,NA19985,NA20127,NA20276,NA20282,NA20287,NA20291,NA20317,NA20356,NA20507,NA20525,NA20529,NA20534,NA20536,NA20537,NA20585,NA20756,NA20765,NA20774,NA20796 nsv1126967 1 2911536 2911850 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985254 M 2 0 1 "" KWS1 esv3561870 1 2911536 2911875 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9760617 M 767 0 1 "" nsv1146929 1 2911551 2911860 CNV deletion John_et_al_2014 26484159 Sequencing nssv3998289 M 1 0 1 "" KWB1 esv3577701 1 2914391 2932446 CNV loss Uddin_et_al_2014 25503493 SNP array essv9783755 M 873 0 1 "" 402060PD nsv951958 1 2916601 2957300 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2998367 M 1 0 1 ACTRT2 BILGI_BIOE esv3585035 1 2918659 2919946 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841903 M 2504 0 1 "" HG01124 esv2667684 1 2918672 2919955 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6361039 M 1151 0 1 "" HG01124 esv2670784 1 2919031 2919366 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6378956,essv6013512,essv6509575,essv5882249,essv6383875,essv5699689,essv6272950,essv5832535,essv6391995,essv5543768,essv6392009,essv5626515,essv6395209,essv5422458,essv6287272,essv5880202,essv6478079,essv5718031,essv6406995,essv5676796,essv6473198,essv5676123,essv6408277,essv5656248,essv6149007,essv5946869,essv6213795,essv5602371,essv6287300,essv5516011,essv6465566,essv5888783,essv6578743,essv5504364,essv6429478,essv5729104,essv6567166,essv5941668,essv6525071,essv5802399,essv6582473,essv5670266,essv6197085,essv5756825,essv6441578,essv5431264,essv6446882,essv5402798,essv6200508,essv5994927,essv6231333,essv5609848,essv6502250,essv5815156,essv6293425,essv5749032,essv6588504,essv5593902,essv6527558,essv5404440,essv6246125,essv5707531,essv6251529,essv5451855,essv6108901,essv5813093,essv6298250,essv5658732,essv6300416,essv5938283,essv6286225,essv5919493,essv6229658,essv5984772,essv6461755,essv5695235,essv6097660,essv5948208,essv6311507,essv5502367,essv6125588,essv5776747,essv6496957,essv5588588,essv6183062,essv5980229,essv6463619,essv5950451,essv6252438,essv5683127,essv6467509,essv5743002,essv6319932,essv5688894,essv6320765,essv5910984,essv6488384,essv5968624,essv6473788,essv5608294,essv6216524,essv5865350,essv6057669,essv5753674,essv6333025,essv5466216,essv6221677,essv5430982,essv6077957,essv5455553,essv6544689,essv5768297,essv6071774,essv5489446,essv6175610,essv5838156,essv6046184,essv5396024,essv6191912,essv5749338,essv6522160,essv5411894,essv6504886,essv5500108,essv6097296,essv5645942,essv6545117,essv5552976,essv6090818,essv5845033,essv6356611,essv5805781,essv6098192,essv6006306,essv6192468,essv6010515,essv6290344,essv5436797,essv6255770,essv5475936,essv6248609,essv5605448,essv6072478,essv5884558,essv6022989,essv5513115,essv6530854,essv5397498,essv6092954,essv5485071,essv5707701,essv5438938,essv5767237,essv5695368,essv5757246,essv5843000,essv5625343,essv5573415,essv5725435 M 1151 0 159 "" HG00098,HG00122,HG00137,HG00140,HG00148,HG00154,HG00159,HG00187,HG00237,HG00249,HG00252,HG00254,HG00285,HG00313,HG00335,HG00345,HG00361,HG00373,HG00421,HG00442,HG00476,HG00478,HG00512,HG00524,HG00525,HG00531,HG00533,HG00542,HG00557,HG00560,HG00592,HG00608,HG00611,HG00662,HG00671,HG00672,HG00683,HG00684,HG00689,HG00692,HG00707,HG00708,HG01079,HG01083,HG01101,HG01112,HG01188,HG01204,HG01334,HG01351,HG01354,HG01357,HG01365,HG01366,HG01378,HG01488,HG01497,NA06986,NA11894,NA11918,NA11920,NA11933,NA12043,NA12046,NA12155,NA12249,NA12282,NA12348,NA12383,NA12489,NA12716,NA12750,NA12827,NA12878,NA12891,NA18532,NA18534,NA18537,NA18541,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18552,NA18555,NA18557,NA18560,NA18563,NA18564,NA18572,NA18573,NA18579,NA18597,NA18605,NA18606,NA18608,NA18609,NA18611,NA18612,NA18617,NA18619,NA18621,NA18622,NA18623,NA18624,NA18627,NA18628,NA18630,NA18632,NA18940,NA18943,NA18945,NA18947,NA18951,NA18953,NA18959,NA18964,NA18973,NA18983,NA18984,NA18986,NA19009,NA19057,NA19063,NA19065,NA19066,NA19072,NA19075,NA19080,NA19654,NA19663,NA19664,NA19720,NA19726,NA19731,NA19732,NA19746,NA19759,NA19771,NA19776,NA19779,NA19782,NA19783,NA19788,NA19914,NA20507,NA20525,NA20529,NA20537,NA20585,NA20756,NA20765,NA20771,NA20772,NA20786,NA20796 nsv1145309 1 2919031 2919366 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982400 M 2 0 1 "" KWS1 esv3561981 1 2919031 2919380 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9760728 M 767 0 1 "" esv3585036 1 2920631 3005757 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841904 M 2504 1 0 ACTRT2,LINC00982,PRDM16 HG01063 nsv1013792 1 2921860 3308288 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477002 M 29084 1 0 ACTRT2,LINC00982,MIR4251,PRDM16 nsv829759 1 2923149 3011137 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450961,nssv1450850 M 95 0 2 ACTRT2,LINC00982,PRDM16 nsv545098 1 2926379 3006131 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708766 M 17421 0 1 ACTRT2,LINC00982,PRDM16 esv1972331 1 2932833 2933235 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4751842 M 1 0 1 "" NA18507 esv2667710 1 2932976 2933125 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5431062,essv6398348,essv5398100,essv6400467,essv5564448,essv6542912,essv5500314,essv6538483,essv5870910,essv6104804,essv5795985,essv6092048,essv5688099,essv6038826,essv5804538,essv6540364,essv5438563,essv6311064,essv5663561,essv6187649,essv5873465,essv6046485,essv5581092,essv6075789,essv5869163,essv6571961,essv5786327,essv6174015,essv5519747,essv6212539,essv5783089,essv6360948,essv5410465,essv6031525,essv6366811,essv6369709,essv6371418,essv6207197,essv6112223 M 1151 0 39 "" HG00442,HG00449,HG00513,HG00581,HG00683,HG00699,HG01334,HG01350,HG01366,HG01498,NA12827,NA18505,NA18526,NA18545,NA18546,NA18559,NA18566,NA18570,NA18573,NA18605,NA18606,NA18611,NA18612,NA18621,NA18622,NA19114,NA19138,NA19190,NA19225,NA19374,NA19382,NA19383,NA19391,NA19395,NA20278,NA20281,NA20299,NA20341,NA20356 esv3585037 1 2937832 2979482 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841905 M 2504 1 0 ACTRT2,LINC00982 HG01063 esv2494725 1 2942135 2943124 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5336919 M 1 1 0 "" NA18507 esv3415692 1 2942192 2943290 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692284 M 185 1 0 "" NA19240 nsv1144340 1 2942535 2942602 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995086 M 2 0 1 "" KWS1 nsv1125449 1 2942548 2942607 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3983623 M 2 0 0 "" KWS2 nsv1000306 1 2947704 3080940 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3465345 M 29084 1 0 LINC00982,MIR4251,PRDM16 nsv1132818 1 2954294 2954363 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3987611 M 2 1 0 "" KWS1 nsv160478 1 2959267 2959267 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179056 M 24 "" nsv951959 1 2967601 3728600 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2999006 M 1 0 1 ARHGEF16,CCDC27,LINC00982,LRRC47,MEGF6,MIR4251,MIR551A,PRDM16,SMIM1,TP73,TP73-AS1,TPRG1L,WRAP73 BILGI_BIOE nsv824697 1 2975857 2994712 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426367 M 31 1 0 LINC00982,PRDM16 AK6 nsv1076898 1 2985799 2987400 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3762113 M 1 0 1 PRDM16 KWP1 nsv1121743 1 2985900 2986400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968393 M 2 0 1 PRDM16 KWS2 nsv1142739 1 2986700 2987400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994238 M 2 0 1 PRDM16 KWS1 nsv545099 1 2993638 3055876 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172587 M 17421 0 1 MIR4251,PRDM16 1780862275_A dgv6e212 1 3003476 3021395 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577703,esv3577702 M 873 0 10 PRDM16 400241CP,40031BA,400439IM,400523GB,400793BR,400836LK,401025SM,401390DG,401459HF,401733CG esv3585038 1 3009447 3137148 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841906 M 2504 1 0 MIR4251,PRDM16 HG01063 nsv1133794 1 3030941 3030996 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995087,nssv3990220 M 2 0 2 PRDM16 KWS1,KWS2 esv3363327 1 3053452 3053452 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824118 M 185 1 0 PRDM16 NA12878 nsv457884 1 3062361 3104630 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv534983 M 1557 0 1 PRDM16 HGDP01234 nsv545100 1 3062361 3104630 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172588 M 17421 0 1 PRDM16 HGDP01234 esv3562426 1 3062996 3063463 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9761173 M 767 0 1 PRDM16 esv2664338 1 3062996 3063479 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6381855 M 1151 0 1 PRDM16 NA12287 esv2676112 1 3063031 3063348 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6514533,essv5787793,essv6446228,essv5955277,essv6197856,essv5572598,essv5787724,essv5839364 M 1151 0 8 PRDM16 HG01441,NA11843,NA19172,NA19189,NA19443,NA19453,NA19470,NA20797 esv2665020 1 3063483 3063603 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6442376,essv5502467,essv6030097,essv5812738,essv6173071,essv5723740,essv6163417,essv5787323,essv6022081,essv5458481,essv6558192,essv5403763,essv6165957,essv5559955,essv6159727,essv5580727,essv6234778,essv5507240,essv6116403,essv5599691,essv5541041 M 1151 0 21 PRDM16 HG00327,HG00335,HG00473,HG00531,HG00581,HG00583,HG00607,HG00654,HG00657,HG00662,HG00683,HG00702,HG00705,NA18547,NA18562,NA18595,NA18610,NA18611,NA18623,NA18949,NA19002 esv3382615 1 3079292 3079990 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692291 M 185 1 0 PRDM16 NA19239 esv22935 1 3081707 3082806 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20220 M 40 5 0 PRDM16 NA07037,NA12004,NA12828,NA18523,NA19240 esv3562537 1 3082015 3082361 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9761284 M 767 0 1 PRDM16 esv2662377 1 3082051 3082399 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5730609,essv6521146,essv5512908,essv6391630,essv5543393,essv6395125,essv5462076,essv6112108,essv5406361,essv5850489,essv5659194,essv6244611,essv5771735,essv5926559,essv5642389,essv6201697,essv5559838,essv6508168,essv5703019,essv6181202,essv5397932,essv6191098,essv5806442,essv6538462,essv5710521,essv6422607,essv5651766,essv5926716,essv5755154,essv6429513,essv5675793,essv6129654,essv5494452,essv6584466,essv5398800,essv6448046,essv5731192,essv6252831,essv5541246,essv6027703,essv5542135,essv6292284,essv5779366,essv6568601,essv5774820,essv6461104,essv5443857,essv6224723,essv5781509,essv6157596,essv5693036,essv6286208,essv5783985,essv5840446,essv5464148,essv6298081,essv5424731,essv6082472,essv5555654,essv5990786,essv5529709,essv6588994,essv5545290,essv6117538,essv5665526,essv6100803,essv5752439,essv5987147,essv5649876,essv6306676,essv5744813,essv5841234,essv5675554,essv6251044,essv5812292,essv6015486,essv5678624,essv6172207,essv5526373,essv5943685,essv5665082,essv6506679,essv5431659,essv6116683,essv5478028,essv6322722,essv5501467,essv5896676,essv5647864,essv5848289,essv6089295,essv5904917,essv6091377,essv5874746,essv6542459,essv5977786,essv6025286,essv6020196,essv5848025,essv6504564,essv6337398,essv6337981,essv6189458,essv5899828,essv6526641,essv5930357,essv5983683,essv6091505,essv6225449,essv6245572,essv6249623,essv6356412,essv6274084,essv6049657,essv5828794,essv5861509,essv6068129,essv6230481,essv6000764,essv6193640,essv6373808,essv6032443,essv6163803,essv6125869,essv6153613,essv6387702,essv5875036 M 1151 0 127 PRDM16 HG00111,HG00123,HG00124,HG00125,HG00150,HG00151,HG00154,HG00159,HG00249,HG00250,HG00251,HG00256,HG00276,HG00277,HG00309,HG00310,HG00315,HG00318,HG00321,HG00324,HG00330,HG00331,HG00334,HG00337,HG00338,HG00342,HG00344,HG00346,HG00369,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00463,HG00464,HG00478,HG00500,HG00513,HG00533,HG00534,HG00543,HG00557,HG00580,HG00581,HG00584,HG00590,HG00607,HG00619,HG00620,HG00650,HG00651,HG00653,HG00656,HG00672,HG00690,HG00699,HG00701,HG00702,HG00705,HG00707,HG00708,HG00734,HG01060,HG01067,HG01069,HG01072,HG01073,HG01079,HG01080,HG01101,HG01107,HG01124,HG01125,HG01136,HG01170,HG01183,HG01204,HG01334,HG01350,HG01351,HG01365,HG01374,HG01375,HG01389,HG01462,HG01498,NA07051,NA07056,NA12043,NA12058,NA18519,NA18530,NA18534,NA18536,NA18542,NA18543,NA18544,NA18546,NA18548,NA18549,NA18558,NA18559,NA18574,NA18595,NA18596,NA18597,NA18599,NA18606,NA18612,NA18619,NA18620,NA18621,NA18635,NA18637,NA18910,NA18990,NA19312,NA19436,NA19463,NA19657,NA19720,NA19834,NA20510 nsv458995 1 3083712 3113680 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv535843 M 1557 0 1 PRDM16 HGDP00814 esv25107 1 3083952 3084887 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12712 M 40 1 0 PRDM16 NA12156 dgv52n54 1 3083980 3086496 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545112,nsv545101 M 17421 0 2 PRDM16 nsv1076902 1 3083999 3085200 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771603 M 1 0 1 PRDM16 KWP1 nsv545102 1 3084032 3084819 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708768 M 17421 1 0 PRDM16 dgv53n54 1 3084032 3086464 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545106,nsv545111,nsv545103 M 17421 7 0 PRDM16 dgv54n54 1 3084085 3084716 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545108,nsv545109,nsv545104,nsv545107,nsv545118,nsv545115,nsv545114 M 17421 0 16 PRDM16 dgv55n54 1 3084085 3084819 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545105,nsv545119 M 17421 0 5 PRDM16 dgv56n54 1 3084136 3084819 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545110,nsv545116 M 17421 19 15 PRDM16 nsv545113 1 3084187 3084342 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708801 M 17421 0 1 PRDM16 nsv545117 1 3084187 3086464 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708831,nssv708828,nssv708830,nssv708829,nssv708834,nssv708832,nssv708833 M 17421 5 2 PRDM16 nsv1142740 1 3084200 3085300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994239 M 2 0 1 PRDM16 KWS1 esv1279453 1 3084534 3084770 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3971964 M 2 0 1 PRDM16 HuRef nsv1142048 1 3092626 3092849 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3978766,nssv3960946 M 2 0 0 PRDM16 KWS1,KWS2 esv1001450 1 3097398 3098603 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586288 M 3 0 1 PRDM16 HuRef esv26942 1 3097463 3098803 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18850 M 40 6 0 PRDM16 NA11931,NA12004,NA12006,NA12287,NA12776,NA15510 nsv1125450 1 3097733 3097909 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3983624 M 2 0 0 PRDM16 KWS2 nsv1078721 1 3097831 3098116 CNV insertion Thareja_et_al_2015 25765185 Sequencing nssv3768427 M 1 1 0 PRDM16 KWP1 nsv1144341 1 3097886 3097962 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995088 M 2 0 1 PRDM16 KWS1 esv2447933 1 3097910 3097971 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5170486 M 1 0 1 PRDM16 NA18507 nsv1115951 1 3097952 3098117 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3978513 M 2 1 0 PRDM16 KWS2 nsv954327 1 3097988 3098103 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000551 M 1 0 1 PRDM16 BILGI_BIOE nsv160334 1 3098015 3098015 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178912 M 24 PRDM16 nsv1142049 1 3098090 3098206 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3993559 M 2 0 0 PRDM16 KWS2 nsv1074509 1 3098118 3098197 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767609 M 1 0 1 PRDM16 KWP1 nsv1137719 1 3098119 3098197 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990221 M 2 0 1 PRDM16 KWS2 nsv1132819 1 3098152 3098209 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3987612 M 2 1 0 PRDM16 KWS1 nsv1125451 1 3098307 3098373 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3983625 M 2 0 0 PRDM16 KWS2 esv2657185 1 3098346 3098555 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5731107,essv6384175,essv5599375,essv6384544,essv5591039,essv5938465,essv5575901,essv6211074,essv5682351,essv6029226,essv5512162,essv6201420,essv5606857,essv6267594,essv5530266,essv6398079,essv5708029,essv6107795,essv5641195,essv6102864,essv5408262,essv6406267,essv5717895,essv6411772,essv5437567,essv6413614,essv5493343,essv6266510,essv5573588,essv6085530,essv5561632,essv5838530,essv5433823,essv6421513,essv5509902,essv5960012,essv5587160,essv6115199,essv5634582,essv5836212,essv5468949,essv6450394,essv5632080,essv6041890,essv5485848,essv6481659,essv5670385,essv6456899,essv5576937,essv6292746,essv5598397,essv6292795,essv5676195,essv5760161,essv5527601,essv6089536,essv5608004,essv5922822,essv5652322,essv6144611,essv5716770,essv6090124,essv5632713,essv5795763,essv5596195,essv6183646,essv5489336,essv5866769,essv5443094,essv6184856,essv5517489,essv6303026,essv5688988,essv6303091,essv5553972,essv5821976,essv5625710,essv6034438,essv5494361,essv6194040,essv5433508,essv5788001,essv5705542,essv5977768,essv5497188,essv6063549,essv5651570,essv6483158,essv5649474,essv6028664,essv5635263,essv5951367,essv5538615,essv6320415,essv5477444,essv6031175,essv5630755,essv5909746,essv6514978,essv6287528,essv6581950,essv6176643,essv6595667,essv5767879,essv6589562,essv5972060,essv6564065,essv5983257,essv6519644,essv6262356,essv6519104,essv5920614,essv6125472,essv5897468,essv6010567,essv5813682,essv5960808,essv5808855,essv5934042,essv6063420,essv5880948,essv6203728,essv5976114,essv6156345,essv5955537,essv5809740,essv6353649,essv6143427,essv6149953,essv6130985,essv5743893,essv6155625,essv6039583,essv6001097,essv6276811,essv6016917,essv6147693,essv6179293,essv6367521,essv5902078,essv5759878,essv5929347,essv5918341,essv6371866,essv6209918,essv5748316,essv5912654,essv5818384,essv5880601,essv6160385,essv6174391,essv6377465,essv6377654,essv5800105,essv6307286,essv5976471,essv6257623,essv6252553,essv6382914,essv6383401,essv5817653,essv6153612 M 1151 0 162 PRDM16 HG00098,HG00111,HG00115,HG00124,HG00151,HG00152,HG00154,HG00159,HG00188,HG00249,HG00250,HG00264,HG00265,HG00272,HG00276,HG00277,HG00281,HG00308,HG00310,HG00311,HG00312,HG00313,HG00337,HG00338,HG00342,HG00344,HG00346,HG00357,HG00369,HG00380,HG00418,HG00428,HG00437,HG00463,HG00464,HG00533,HG00577,HG00580,HG00590,HG00593,HG00619,HG00625,HG00637,HG00651,HG00690,HG00693,HG00699,HG00705,HG00734,HG00736,HG00737,HG00739,HG01052,HG01060,HG01069,HG01070,HG01072,HG01073,HG01079,HG01080,HG01107,HG01124,HG01136,HG01137,HG01171,HG01190,HG01191,HG01251,HG01253,HG01334,HG01353,HG01357,HG01359,HG01360,HG01374,HG01383,HG01384,HG01390,HG01441,HG01462,HG01489,HG01516,HG01521,NA07051,NA07056,NA11992,NA12058,NA12155,NA12341,NA12347,NA12399,NA18487,NA18507,NA18530,NA18541,NA18542,NA18550,NA18570,NA18574,NA18582,NA18597,NA18606,NA18612,NA18619,NA18620,NA18638,NA18868,NA18933,NA18963,NA18977,NA18986,NA18999,NA19055,NA19065,NA19074,NA19080,NA19088,NA19198,NA19225,NA19235,NA19312,NA19316,NA19317,NA19373,NA19374,NA19381,NA19396,NA19404,NA19435,NA19436,NA19437,NA19438,NA19451,NA19461,NA19463,NA19660,NA19670,NA19675,NA19685,NA19713,NA19720,NA19749,NA19758,NA19759,NA19761,NA19776,NA19783,NA19785,NA19917,NA19985,NA20294,NA20317,NA20341,NA20513,NA20529,NA20540,NA20588,NA20758,NA20802,NA20803,NA20805,NA20809 nsv1071333 1 3098366 3098489 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769828 M 1 0 1 PRDM16 KWP1 dgv20n106 1 3098371 3098489 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1122284,nsv1122617 M 2 0 2 PRDM16 KWS1,KWS2 esv3562648 1 3098371 3098489 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9761395 M 767 0 1 PRDM16 nsv1149038 1 3098391 3098451 CNV deletion John_et_al_2014 26484159 Sequencing nssv4002546 M 1 0 1 PRDM16 KWB1 nsv1130628 1 3098424 3098642 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966941 M 2 0 1 PRDM16 KWS2 nsv545120 1 3111748 3138111 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708840 M 17421 0 1 PRDM16 nsv829870 1 3126805 3256088 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451405,nssv1451183,nssv1451294,nssv1451072 M 95 0 4 PRDM16 esv3384045 1 3130352 3130371 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678397 M 185 1 0 PRDM16 NA19240 nsv1132820 1 3131886 3131980 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3987613 M 2 1 0 PRDM16 KWS1 dgv7e212 1 3140279 3153498 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577708,esv3577704,esv3577707,esv3577706 M 873 0 15 PRDM16 400061DE,400076LC,400361HC,400478WE,400515ZG,400574MA,400650RM,400893ZE,401021SC,401165SB,401183HP,401406KF,401505WI,401551MB,402064DC esv3585040 1 3144724 3209782 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841970 M 2504 1 0 PRDM16 HG01063 nsv527875 1 3144745 3208830 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704374 M 2026 0 1 PRDM16 nsv829981 1 3152592 3333816 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441618,nssv1441530,nssv1441630,nssv1441607,nssv1441563,nssv1441552,nssv1441596,nssv1441541,nssv1441674,nssv1441574,nssv1441641,nssv1441663,nssv1441519,nssv1441685,nssv1441652,nssv1441585 M 95 0 16 PRDM16 esv2639320 1 3177065 3177709 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5229663 M 1 1 0 PRDM16 NA18507 nsv1132822 1 3186203 3186255 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3987615 M 2 1 0 PRDM16 KWS1 nsv1147331 1 3186213 3186267 CNV insertion John_et_al_2014 26484159 Sequencing nssv4000105 M 1 1 0 PRDM16 KWB1 nsv1110989 1 3186275 3186350 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3961418 M 2 0 0 PRDM16 KWS1 nsv545121 1 3188309 3203121 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708841 M 17421 0 1 PRDM16 nsv1151429 1 3204129 3204184 CNV deletion John_et_al_2014 26484159 Sequencing nssv4003992 M 1 0 1 PRDM16 KWB1 dgv6n67 1 3209858 3211328 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824919,nsv824808 M 31 0 2 PRDM16 AK14,NA18552 esv3585041 1 3209922 3212186 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841972,essv9841971 M 2504 0 2 PRDM16 HG00581,NA18552 esv2670143 1 3209949 3212147 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6405701,essv6423827,essv6527111,essv6317073,essv6330380,essv6215077 M 1151 0 6 PRDM16 HG00418,HG00427,HG00581,HG00592,NA18552,NA19003 nsv7645 1 3214107 3249187 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4419 M 9 1 0 PRDM16 NA12878 nsv161030 1 3214565 3214565 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179608 M 24 PRDM16 esv2582992 1 3215213 3217295 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5311128 M 1 0 1 PRDM16 NA18507 esv2000244 1 3215531 3216456 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4511826 M 1 0 1 PRDM16 NA18507 nsv511673 1 3215607 3217688 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626311 M 1 0 1 PRDM16 1 esv1917341 1 3215619 3216216 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4748244 M 1 0 1 PRDM16 NA18507 esv22281 1 3215660 3217110 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11880 M 40 0 11 PRDM16 NA11894,NA12004,NA12006,NA12044,NA12489,NA12878,NA15510,NA18502,NA18511,NA18861,NA19240 nsv545122 1 3216117 3217019 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708842 M 17421 0 1 PRDM16 nsv1074510 1 3216499 3216900 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772223 M 1 0 1 PRDM16 KWP1 nsv830092 1 3217946 3383373 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441840,nssv1441807,nssv1441829,nssv1441774,nssv1441763,nssv1441752,nssv1441741,nssv1441796,nssv1441718,nssv1441818,nssv1441696,nssv1441707,nssv1441729,nssv1441785 M 95 1 13 ARHGEF16,PRDM16 nsv1076915 1 3220353 3220539 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767351 M 1 0 1 PRDM16 KWP1 nsv522146 1 3227188 3228915 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694919 M 2026 0 1 PRDM16 nsv1115331 1 3236500 3238900 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976383 M 2 1 0 PRDM16 KWS2 esv2662201 1 3238067 3238529 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5620017,essv5840751,essv5513919,essv6400750,essv5467613,essv6010041,essv5576041,essv5823120,essv5718955,essv6010527,essv5556253,essv6487762,essv5677945,essv6193777,essv5750981,essv6540045,essv5579548,essv6133019,essv5610976,essv6524346,essv5798711,essv6282849,essv5602859,essv5904874,essv5723965,essv6147593,essv5503928,essv6064507,essv5654746,essv5907889,essv5684629,essv6146874,essv5413984,essv5980277,essv5797750,essv6282709,essv5802014,essv6127966,essv5764376,essv6201031,essv5692928,essv6093751,essv6117936,essv6156319,essv6229789,essv6377111,essv6172970 M 1151 0 47 PRDM16 HG01094,HG01108,NA18486,NA18488,NA18510,NA18519,NA18520,NA18523,NA18853,NA18874,NA18907,NA18910,NA19092,NA19093,NA19099,NA19108,NA19116,NA19138,NA19313,NA19319,NA19321,NA19359,NA19360,NA19372,NA19373,NA19374,NA19377,NA19382,NA19431,NA19443,NA19455,NA19471,NA19472,NA19649,NA19676,NA19711,NA19818,NA19835,NA19900,NA19904,NA19920,NA20127,NA20287,NA20291,NA20322,NA20346,NA20507 esv998521 1 3242595 3242653 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584219 M 3 0 1 PRDM16 HuRef esv1330141 1 3242609 3242668 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3645168 M 2 0 1 PRDM16 HuRef esv3340545 1 3252392 3254790 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692298 M 185 1 0 PRDM16 NA19240 nsv1141125 1 3252500 3254700 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3992632 M 2 1 0 PRDM16 KWS2 esv3347294 1 3252592 3253890 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692299 M 185 1 0 PRDM16 NA19239 nsv1118426 1 3252700 3253900 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3958932 M 2 1 0 PRDM16 KWS1 nsv526836 1 3259113 3259183 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703193 M 2026 0 1 PRDM16 nsv1076920 1 3262326 3262393 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764268 M 1 0 1 PRDM16 KWP1 nsv1133795 1 3262327 3262393 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969364 M 2 0 1 PRDM16 KWS2 nsv1122285 1 3264401 3264477 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969736 M 2 0 1 PRDM16 KWS2 nsv512711 1 3268066 3268106 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625335 M 1 1 0 PRDM16 1 nsv470687 1 3273063 3679774 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547682,nssv547680,nssv547679,nssv547675,nssv547685,nssv547683,nssv547674,nssv547681,nssv547677,nssv547684,nssv547676,nssv547686 M 443 0 8 ARHGEF16,CCDC27,MEGF6,MIR551A,PRDM16,TP73,TP73-AS1,TPRG1L,WRAP73 HGDP00288,HGDP00298,HGDP00302,HGDP00546,HGDP00550,HGDP00657,HGDP00825,HGDP00978 esv2758915 1 3288938 3548853 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757719 M 270 1 0 ARHGEF16,MEGF6,MIR551A,PRDM16,TPRG1L,WRAP73 NA18943 nsv459950 1 3289729 3301130 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536592 M 1557 0 1 PRDM16 HGDP00788 nsv545123 1 3289729 3301130 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172589 M 17421 0 1 PRDM16 HGDP00788 nsv522900 1 3293665 3294972 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698558 M 2026 0 1 PRDM16 nsv1076925 1 3295599 3296700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766166 M 1 0 1 PRDM16 KWP1 nsv1136060 1 3295600 3296600 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989665 M 2 0 1 PRDM16 KWS2 nsv524467 1 3308034 3308498 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700403 M 2026 0 1 PRDM16 dgv1n21 1 3308034 3314596 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv527139,nsv521921 M 2026 2 0 PRDM16 esv3414281 1 3324792 3326890 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692300 M 185 1 0 PRDM16 NA19240 esv2658512 1 3325300 3325742 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5825792,essv5442746,essv6396674,essv5544323,essv6229268,essv5416482,essv6472486,essv5612429,essv6062443,essv5415576,essv6415451,essv5751828,essv6421345,essv5683921,essv6521454,essv5570301,essv6426264,essv5561326,essv6145497,essv5457541,essv6430636,essv5753076,essv6432957,essv5694021,essv6226057,essv5536391,essv6436961,essv5514782,essv6286815,essv5488483,essv5922207,essv5546149,essv6293451,essv5492481,essv6239558,essv5512898,essv5827967,essv5405859,essv5827153,essv5640915,essv6205377,essv5473193,essv6300687,essv5428889,essv6295141,essv5680358,essv6238029,essv5707079,essv6468293,essv5608926,essv6472020,essv5711992,essv6554556,essv5461948,essv5895839,essv6562101,essv6180680,essv6576147,essv5990793,essv6579467,essv5962612,essv6207899,essv6497657,essv6101588,essv6556662,essv6111677,essv5965811,essv6153056,essv6342267,essv5793609,essv5875312,essv5987102,essv6349013,essv6515768,essv6065680,essv6537650,essv6185499,essv5906030,essv6189238,essv5761519,essv6360850,essv5931372,essv6168011,essv6161183,essv6371198,essv6375990,essv5825626,essv5912664,essv5981317,essv6140912 M 1151 0 90 PRDM16 HG00123,HG00133,HG00342,HG00437,HG01170,HG01204,NA07051,NA11892,NA11893,NA11930,NA11932,NA12340,NA12348,NA12546,NA12778,NA12827,NA12830,NA12842,NA12889,NA18486,NA18499,NA18522,NA18545,NA18548,NA18553,NA18570,NA18595,NA18597,NA18602,NA18606,NA18853,NA18908,NA18912,NA18947,NA18950,NA18956,NA18973,NA19078,NA19107,NA19247,NA19248,NA19313,NA19332,NA19334,NA19350,NA19446,NA19471,NA19473,NA19652,NA19682,NA19684,NA19700,NA19713,NA19789,NA19818,NA19920,NA20507,NA20513,NA20514,NA20521,NA20522,NA20525,NA20526,NA20533,NA20537,NA20581,NA20585,NA20760,NA20761,NA20771,NA20778,NA20783,NA20785,NA20786,NA20787,NA20790,NA20792,NA20795,NA20798,NA20799,NA20801,NA20803,NA20805,NA20806,NA20809,NA20811,NA20812,NA20816,NA20819,NA20828 nsv1075973 1 3325367 3325419 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769982 M 1 0 1 PRDM16 KWP1 esv3347804 1 3326092 3326790 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692301 M 185 1 0 PRDM16 NA19239 esv1000452 1 3334395 3339966 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565499 M 3 0 1 PRDM16 HuRef esv4712 1 3349953 3350265 CNV loss Wang_et_al_2008 18987735 Sequencing essv27153 M 1 0 1 PRDM16 YH nsv830203 1 3362938 3524316 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441852,nssv1441863 M 95 0 2 ARHGEF16,MEGF6,MIR551A nsv160351 1 3367019 3367019 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178929 M 24 "" nsv545124 1 3368143 3405296 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708843 M 17421 0 1 ARHGEF16,MEGF6 esv3893545 1 3377442 3428608 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779427 M 3017 0 1 ARHGEF16,MEGF6 nsv475972 1 3380182 3380182 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013178 M 9 1 0 ARHGEF16 NA12878 nsv476024 1 3383055 3383055 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013501 M 9 1 0 ARHGEF16 NA12878 esv3563426 1 3387427 3387479 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9762173 M 767 0 1 ARHGEF16 esv1571906 1 3391645 3391705 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4030830 M 2 0 1 ARHGEF16 HuRef nsv299 1 3393492 3429269 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4519,nssv4678,nssv9111 M 9 3 0 ARHGEF16,MEGF6 NA12156,NA12878,NA19129 esv3355688 1 3393663 3393908 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652084 M 185 1 0 ARHGEF16 NA19240 esv3449417 1 3393811 3393872 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808964 M 185 1 0 ARHGEF16 NA12878 nsv1012423 1 3394250 4807509 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696759 M 29084 1 0 AJAP1,ARHGEF16,C1orf174,CCDC27,CEP104,DFFB,LINC01134,LOC284661,LOC728716,LRRC47,MEGF6,MIR551A,SMIM1,TP73,TP73-AS1,TPRG1L,WRAP73 esv3368997 1 3401063 3401063 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825207 M 185 1 0 "" NA19240 dgv7n67 1 3401073 3405662 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825142,nsv825364,nsv825031 M 31 3 0 MEGF6 NA18542,NA18951,NA18973 nsv825253 1 3401073 3405924 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434860 M 31 0 1 MEGF6 NA18942 nsv545125 1 3407007 3457295 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708844 M 17421 0 1 MEGF6 esv3417230 1 3418297 3418875 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808966 M 185 1 0 MEGF6 NA12878 nsv1120184 1 3418554 3418613 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960947 M 2 0 0 MEGF6 KWS1 esv2862902 1 3418554 3418668 CNV duplication Pang_et_al_2013b 24192839 Sequencing essv7132469 M 1 1 0 MEGF6 HuRef nsv1153001 1 3418555 3418637 CNV insertion John_et_al_2014 26484159 Sequencing nssv3998036 M 1 1 0 MEGF6 KWB1 nsv1140403 1 3418581 3418660 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3979109 M 2 0 0 MEGF6 KWS2 esv3352832 1 3418604 3418692 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652085 M 185 1 0 MEGF6 NA19240 esv1595391 1 3418613 3418613 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3895480 M 2 1 0 MEGF6 HuRef nsv1009360 1 3420135 3540212 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467524 M 29084 1 0 MEGF6,MIR551A nsv1135753 1 3427059 3427117 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989337 M 2 0 1 MEGF6 KWS2 nsv818333 1 3441264 3456871 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417807 M 112 0 1 MEGF6 NA18853 nsv10494 1 3446134 3451956 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21444,nssv21442 M 31 0 2 MEGF6 NA18942,NA18975 nsv1142741 1 3447400 3448500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994240 M 2 0 1 MEGF6 KWS1 nsv519082 1 3455757 3456592 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696553 M 2026 1 0 MEGF6 nsv545126 1 3455757 3499246 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708845 M 17421 0 1 MEGF6,MIR551A nsv474159 1 3473389 3473389 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014646 M 9 1 0 MEGF6 NA18507 nsv1004180 1 3474631 3540212 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468122 M 29084 1 0 MEGF6,MIR551A nsv545127 1 3480149 3499246 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708846 M 17421 0 1 MEGF6 nsv818444 1 3487126 3510633 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417551 M 112 0 1 MEGF6 NA18971 esv3563537 1 3488273 3488330 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9762284 M 767 0 1 MEGF6 nsv1132823 1 3495303 3495360 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3987616 M 2 1 0 MEGF6 KWS1 nsv1140107 1 3495306 3495384 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3978819 M 2 1 0 MEGF6 KWS2 esv1003247 1 3495308 3495308 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570647 M 3 1 0 MEGF6 HuRef esv1491138 1 3495329 3495329 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3621012 M 2 1 0 MEGF6 HuRef nsv1146093 1 3495385 3495468 CNV insertion John_et_al_2014 26484159 Sequencing nssv3999297 M 1 1 0 MEGF6 KWB1 esv2470115 1 3499392 3502772 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5366115 M 1 0 1 MEGF6 NA18507 esv28730 1 3499732 3500631 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13258 M 40 0 3 MEGF6 NA12489,NA18861,NA18916 esv1062679 1 3500027 3500099 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4165604 M 2 0 1 MEGF6 HuRef nsv1128585 1 3501300 3502900 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960496 M 2 1 0 MEGF6 KWS1 esv3563648 1 3501599 3501823 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9762395 M 767 0 1 MEGF6 esv2672292 1 3501678 3502157 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5787617,essv6420111,essv5416542,essv6292374,essv5907773,essv6141781,essv5553326,essv5820942 M 1151 0 8 MEGF6 HG00442,HG00512,NA18545,NA18632,NA18956,NA18973,NA18987,NA19130 esv3413189 1 3501792 3503090 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692303 M 185 1 0 MEGF6 NA19240 esv3585042 1 3502139 4320143 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841974,essv9841973 M 2504 2 0 C1orf174,CCDC27,CEP104,DFFB,LINC01134,LOC728716,LRRC47,MEGF6,SMIM1,TP73,TP73-AS1,TPRG1L,WRAP73 HG02481,NA20872 esv1072885 1 3504446 3504446 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4183764 M 2 1 0 MEGF6 HuRef nsv160325 1 3504447 3504447 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178903 M 24 MEGF6 nsv1075038 1 3504499 3505300 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764892 M 1 0 1 MEGF6 KWP1 nsv1142742 1 3504500 3505100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994241 M 2 0 1 MEGF6 KWS1 nsv160986 1 3508189 3508254 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179564 M 24 MEGF6 nsv160621 1 3508211 3508276 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179199 M 24 MEGF6 nsv1140736 1 3508401 3508451 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3992242 M 2 0 1 MEGF6 KWS1 esv1645766 1 3508420 3508486 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4161797 M 2 0 1 MEGF6 HuRef esv3585043 1 3508964 3515259 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841975 M 2504 0 1 MEGF6 HG03571 nsv1132824 1 3513321 3513398 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3987617 M 2 1 0 MEGF6 KWS1 dgv26e59 1 3521092 3522390 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3363109,esv3391335 M 185 2 0 MEGF6 NA19239,NA19240 esv3585044 1 3527608 3553912 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841976 M 2504 1 0 MEGF6,TPRG1L,WRAP73 NA20872 esv3585045 1 3527725 3603484 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841977 M 2504 1 0 MEGF6,TP73,TPRG1L,WRAP73 NA20872 nsv1001715 1 3544183 3686318 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481065 M 29084 0 1 CCDC27,TP73,TP73-AS1,TPRG1L,WRAP73 nsv545128 1 3546935 3616601 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708847 M 17421 0 1 TP73,WRAP73 nsv410 1 3551651 3583644 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10069 M 9 1 0 TP73,WRAP73 NA18956 esv2247294 1 3556844 3557317 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4665883 M 1 0 1 WRAP73 NA18507 esv2489412 1 3559736 3561398 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5381740 M 1 0 1 WRAP73 NA18507 esv29463 1 3560245 3560955 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11696 M 40 0 1 WRAP73 NA15510 esv2853680 1 3560257 3560971 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123247 M 1 0 1 WRAP73 HuRef esv1007908 1 3560447 3560956 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571323 M 3 0 1 WRAP73 HuRef nsv830314 1 3577340 3720839 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441874,nssv1441907,nssv1441985,nssv1441974,nssv1441929,nssv1441918,nssv1441996,nssv1441940,nssv1441951,nssv1441896,nssv1441963,nssv1441885 M 95 1 11 CCDC27,LRRC47,SMIM1,TP73,TP73-AS1 esv2758916 1 3585041 3655536 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756833 M 270 1 0 TP73,TP73-AS1 NA10855 dgv8e212 1 3585911 3589696 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577709,esv3577710 M 873 0 5 TP73 400534ME,401030GI,401348RB,401898DS,402061PI nsv1150687 1 3591596 3591844 CNV deletion John_et_al_2014 26484159 Sequencing nssv3996159 M 1 0 1 TP73 KWB1 nsv1075979 1 3591645 3591925 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764110 M 1 0 1 TP73 KWP1 nsv460061 1 3597017 3671791 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536686 M 1557 0 1 CCDC27,TP73,TP73-AS1 HGDP00787 nsv545129 1 3597017 3671791 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172590 M 17421 0 1 CCDC27,TP73,TP73-AS1 HGDP00787 nsv1140740 1 3598433 3598510 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3992246 M 2 0 1 TP73 KWS1 dgv27e59 1 3610192 3611590 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3382922,esv3432428 M 185 1 0 TP73 NA19240 esv1394802 1 3610346 3610346 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4024850 M 2 1 0 TP73 HuRef esv3378361 1 3610592 3611590 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692311 M 185 1 0 TP73 NA19238 esv1032022 1 3610682 3610682 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3640841 M 2 1 0 TP73 HuRef esv1115862 1 3610827 3610827 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4358577 M 2 1 0 TP73 HuRef esv1634361 1 3610899 3611319 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3887450 M 2 0 1 TP73 HuRef nsv1145949 1 3623006 3623092 CNV insertion John_et_al_2014 26484159 Sequencing nssv3997313 M 1 1 0 TP73 KWB1 dgv21n106 1 3641800 3643000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1142743,nsv1136061 M 2 0 2 TP73 KWS1,KWS2 nsv1075045 1 3642199 3643000 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772995 M 1 0 1 TP73 KWP1 dgv13n100 1 3647012 3707880 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002837,nsv1004361 M 29084 2 0 CCDC27,LRRC47,SMIM1,TP73,TP73-AS1 esv994567 1 3652123 3655370 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565096 M 3 0 1 TP73,TP73-AS1 HuRef nsv830425 1 3657453 3758389 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442007 M 95 1 0 CCDC27,CEP104,LRRC47,SMIM1,TP73-AS1 nsv478669 1 3658331 3658331 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012836 M 9 1 0 TP73-AS1 NA18507 esv2677777 1 3666629 3668433 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5908521 M 1151 0 1 "" NA19390 esv3585047 1 3670490 3671676 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841990,essv9841989,essv9841985,essv9841988,essv9841987,essv9841986,essv9841992,essv9841991 M 2504 0 8 CCDC27 HG02429,HG02479,HG02496,HG03370,NA18501,NA19307,NA19324,NA19397 esv2659590 1 3670537 3671607 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5770360,essv5786877,essv5470080,essv6424233,essv6060763,essv6182763,essv6358993 M 1151 0 7 CCDC27 NA18501,NA18853,NA18910,NA19373,NA19381,NA19397,NA19473 esv3585048 1 3672777 3685462 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841993,essv9841995,essv9841994 M 2504 3 0 CCDC27 NA19355,NA19434,NA20872 esv3585049 1 3698222 3711516 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841997,essv9841996,essv9841998 M 2504 0 3 LRRC47 HG00610,HG00625,HG00626 esv3585050 1 3698222 3711516 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9841999 M 2504 1 0 LRRC47 NA20872 esv1678500 1 3714289 3714289 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4118454 M 2 1 0 "" HuRef esv1763700 1 3716941 3717091 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4015442 M 2 0 1 "" HuRef dgv6e199 1 3716953 3717153 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2663574,esv2676394 M 1151 0 81 "" HG00108,HG00111,HG00125,HG00136,HG00140,HG00142,HG00151,HG00154,HG00232,HG00253,HG00261,HG00268,HG00275,HG00280,HG00284,HG00285,HG00309,HG00310,HG00318,HG00320,HG00324,HG00326,HG00331,HG00334,HG00337,HG00346,HG00436,HG00501,HG00524,HG00589,HG00590,HG00657,HG00662,HG00692,HG00740,HG01048,HG01051,HG01067,HG01073,HG01108,HG01125,HG01173,HG01187,HG01350,HG01353,HG01365,HG01374,HG01437,HG01440,NA07347,NA11918,NA12006,NA12830,NA18511,NA18517,NA18595,NA18623,NA18861,NA18953,NA19114,NA19138,NA19147,NA19172,NA19359,NA19371,NA19374,NA19375,NA19379,NA19381,NA19385,NA19390,NA19391,NA19394,NA19397,NA19439,NA20294,NA20332,NA20502,NA20507,NA20527,NA20528 nsv1112216 1 3717013 3717112 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965913 M 2 0 1 "" KWS2 esv3585052 1 3734485 3844788 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9842001,essv9842002 M 2504 2 0 C1orf174,CEP104,DFFB,LINC01134 HG02481,NA20872 nsv509590 1 3743021 3819056 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623769 M 4 1 0 C1orf174,CEP104,DFFB,LINC01134 NA18994 nsv545130 1 3743132 4343948 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172591 M 17421 1 0 C1orf174,CEP104,DFFB,LINC01134,LOC728716 1780862339_A esv1948239 1 3748871 3749215 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4952306 M 1 0 1 CEP104 NA18507 nsv1141741 1 3748902 3748985 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3993247 M 2 1 0 CEP104 KWS2 esv1074506 1 3748997 3748997 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3942170 M 2 1 0 CEP104 HuRef nsv1140742 1 3749023 3749098 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3992248 M 2 0 1 CEP104 KWS1 nsv159844 1 3759905 3761262 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178422 M 24 CEP104 nsv1116483 1 3770895 3770980 OTHER inversion Alsmadi_et_al_2014 24896259 Sequencing nssv3978664 M 2 0 0 CEP104 KWS2 nsv479517 1 3783035 3783035 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012022 M 9 0 0 DFFB esv1467252 1 3785236 3785236 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4229403 M 2 1 0 DFFB HuRef nsv480404 1 3785495 3785495 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011405 M 9 0 0 DFFB nsv473755 1 3787116 3787116 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017508 M 9 1 0 DFFB NA12156 nsv479682 1 3787207 3787207 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012592 M 9 0 0 DFFB esv1008825 1 3790827 3790983 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580646 M 3 0 1 DFFB HuRef esv1273516 1 3790827 3790984 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4131794 M 2 0 1 DFFB HuRef esv992605 1 3790827 3791061 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585949 M 3 0 1 DFFB HuRef nsv480762 1 3791205 3791205 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012639 M 9 0 0 DFFB nsv476313 1 3791215 3791215 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014524 M 9 1 0 DFFB NA12878 nsv481045 1 3793002 3793002 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011297 M 9 0 0 DFFB nsv474298 1 3793685 3793685 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020439 M 9 1 0 DFFB NA18507 nsv480565 1 3794412 3794412 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012547 M 9 0 0 DFFB nsv480530 1 3794649 3794649 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014312 M 9 0 0 DFFB nsv474895 1 3794993 3794993 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014698 M 9 1 0 DFFB NA18956 nsv480658 1 3797056 3797056 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012832 M 9 0 0 DFFB nsv472199 1 3797102 3797102 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016248 M 9 1 0 DFFB NA18555 nsv480877 1 3798619 3798619 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015174 M 9 0 0 DFFB nsv480517 1 3799719 3799719 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011682 M 9 0 0 DFFB nsv480775 1 3799968 3799968 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015333 M 9 0 0 DFFB nsv480683 1 3803422 3803422 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014297 M 9 0 0 "" nsv474247 1 3805503 3805503 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015360 M 9 1 0 "" NA18507 nsv474199 1 3806517 3806517 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017129 M 9 1 0 C1orf174 NA18507 esv26417 1 3808437 3809202 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16927 M 40 2 0 C1orf174 NA19099,NA19225 esv1352346 1 3808984 3809076 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4067715 M 2 0 1 C1orf174 HuRef dgv22n106 1 3836500 3837300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1136062,nsv1142744 M 2 0 2 "" KWS1,KWS2 nsv1074534 1 3836599 3837300 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3763412 M 1 0 1 "" KWP1 esv3585054 1 3995323 4001974 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844462,essv9844464,essv9844463 M 2504 3 0 LOC728716 HG01191,HG02481,NA20872 dgv3e214 1 4000527 4147217 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing esv3585055,esv3585056 M 2504 2 0 LOC728716 HG02481,NA20872 nsv460172 1 4014091 4080780 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536774 M 1557 0 1 "" HGDP00586 nsv545131 1 4014091 4080780 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172592 M 17421 0 1 "" HGDP00586 nsv479376 1 4025289 4025289 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017501 M 9 0 0 "" nsv481575 1 4028346 4028346 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018750 M 9 0 0 "" nsv521 1 4043864 4048033 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1327 M 9 1 0 "" NA19240 esv26736 1 4044756 4045264 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11152 M 40 0 1 "" NA18916 nsv1140108 1 4059742 4059804 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3978820 M 2 1 0 "" KWS2 esv3332307 1 4059814 4059997 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652088 M 185 1 0 "" NA19240 esv1003004 1 4059827 4059944 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578431 M 3 0 1 "" HuRef esv1647727 1 4059835 4059953 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3880229 M 2 0 1 "" HuRef nsv159163 1 4059836 4059953 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177741 M 24 "" nsv1149637 1 4059881 4059980 CNV deletion John_et_al_2014 26484159 Sequencing nssv4000933 M 1 0 1 "" KWB1 nsv1112217 1 4059899 4060023 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965914 M 2 0 1 "" KWS2 esv3585057 1 4075955 4077963 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844469 M 2504 0 1 "" HG02725 esv3893656 1 4111187 4128523 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25779899 M 3017 0 1 "" nsv545132 1 4117238 4124657 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708848 M 17421 0 1 "" esv3893767 1 4117554 4299727 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785971 M 3017 0 1 "" nsv460283 1 4117554 4299727 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536884 M 1557 0 1 "" HGDP00817 nsv545133 1 4117554 4299727 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172593 M 17421 0 1 "" HGDP00817 nsv520675 1 4120311 4123099 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697551 M 2026 0 1 "" nsv952035 1 4120501 4127700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2999228 M 1 0 1 "" BILGI_BIOE esv2674556 1 4123545 4127892 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6405492,essv5398297,essv6417603,essv6498795 M 1151 0 4 "" HG01515,HG01516,HG01519,HG01522 esv21720 1 4123843 4127968 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12064 M 40 0 3 "" NA12749,NA12878,NA19108 nsv545134 1 4123849 4127522 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708849 M 17421 0 1 "" dgv57n54 1 4124155 4128523 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545136,nsv545135 M 17421 2 0 "" nsv1153626 1 4124199 4127700 CNV duplication John_et_al_2014 26484159 Sequencing nssv4002280 M 1 1 0 "" KWB1 nsv1077281 1 4124399 4127600 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3768494 M 1 1 0 "" KWP1 nsv1118427 1 4124400 4127700 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3958933 M 2 1 0 "" KWS1 esv5203 1 4124544 4124998 CNV loss Wang_et_al_2008 18987735 Sequencing essv27644 M 1 0 1 "" YH nsv1120185 1 4124612 4126897 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960948 M 2 0 0 "" KWS1 nsv1144342 1 4125007 4125067 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995089 M 2 0 1 "" KWS1 nsv511674 1 4125242 4125939 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626312 M 1 0 1 "" 1 nsv1145310 1 4125276 4126887 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982401 M 2 0 1 "" KWS1 esv1280652 1 4125335 4125432 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3810874 M 2 0 1 "" HuRef nsv1125452 1 4125387 4126897 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3983626 M 2 0 0 "" KWS2 dgv28e59 1 4125692 4127790 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3387532,esv3352978 M 185 2 0 "" NA19239,NA19240 esv5764 1 4125783 4127419 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28205 M 1 0 0 "" dgv7e199 1 4125979 4126949 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2669964,esv2669579 M 1151 0 156 "" HG00111,HG00116,HG00117,HG00119,HG00120,HG00124,HG00145,HG00154,HG00159,HG00190,HG00245,HG00253,HG00258,HG00264,HG00265,HG00280,HG00284,HG00285,HG00306,HG00310,HG00313,HG00325,HG00367,HG00427,HG00436,HG00472,HG00500,HG00501,HG00524,HG00534,HG00536,HG00542,HG00590,HG00683,HG00702,HG00705,HG00707,HG00732,HG01047,HG01055,HG01070,HG01095,HG01168,HG01173,HG01187,HG01198,HG01342,HG01351,HG01353,HG01359,HG01374,HG01440,HG01456,HG01465,HG01494,HG01519,NA06984,NA06989,NA07048,NA11830,NA11831,NA11994,NA12003,NA12154,NA12155,NA12341,NA12342,NA12347,NA12348,NA12400,NA18487,NA18489,NA18533,NA18541,NA18542,NA18559,NA18560,NA18561,NA18565,NA18595,NA18620,NA18625,NA18856,NA18867,NA18874,NA18908,NA18942,NA18950,NA18952,NA18964,NA18977,NA18988,NA18999,NA19004,NA19005,NA19060,NA19065,NA19066,NA19067,NA19068,NA19092,NA19172,NA19189,NA19213,NA19235,NA19331,NA19347,NA19350,NA19355,NA19372,NA19393,NA19440,NA19461,NA19471,NA19651,NA19654,NA19655,NA19658,NA19681,NA19682,NA19684,NA19701,NA19713,NA19725,NA19729,NA19731,NA19747,NA19771,NA19777,NA19779,NA19780,NA19783,NA19835,NA19900,NA19901,NA19904,NA19917,NA19921,NA19982,NA20299,NA20322,NA20340,NA20541,NA20544,NA20582,NA20588,NA20757,NA20769,NA20787,NA20795,NA20800,NA20801,NA20802,NA20810,NA20814,NA20816 nsv1129454 1 4127134 4127228 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3962908 M 2 0 0 "" KWS1 nsv1148039 1 4133090 4133152 CNV insertion John_et_al_2014 26484159 Sequencing nssv4001550 M 1 1 0 "" KWB1 esv23365 1 4136993 4138968 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16191,esv13534 M 40 0 13 "" NA12004,NA12006,NA12239,NA12287,NA12489,NA12828,NA18505,NA18858,NA18907,NA18909,NA18916,NA19099,NA19147 esv1000769 1 4137301 4137706 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578155 M 3 0 1 "" HuRef esv1100125 1 4137381 4137787 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3668289 M 2 0 1 "" HuRef nsv821406 1 4137818 4138918 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420735 M 1 1 0 "" NA10851 esv1767486 1 4138561 4138561 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4227901 M 2 1 0 "" HuRef nsv509701 1 4142890 4219900 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619763 M 4 1 0 "" NA10860 esv2637444 1 4154509 4156134 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5194644 M 1 0 1 "" NA18507 esv2259067 1 4154970 4155665 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4563770 M 1 0 1 "" NA18507 esv7346 1 4154995 4155708 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29787 M 1 0 0 "" esv3887 1 4155049 4155584 CNV loss Wang_et_al_2008 18987735 Sequencing essv26328 M 1 0 1 "" YH esv3564426 1 4155097 4155500 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9763173 M 767 0 1 "" nsv1147151 1 4155131 4155468 CNV deletion John_et_al_2014 26484159 Sequencing nssv3998511 M 1 0 1 "" KWB1 nsv958832 1 4155141 4155470 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005185 M 1 0 1 "" BILGI_BIOE esv2659809 1 4155146 4155460 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5596722,essv6011900,essv5495316,essv6118494,essv5436195,essv5797462,essv5689998,essv6274740,essv5716477,essv6385060,essv5555798,essv6282481,essv5733440,essv6389276,essv5463504,essv5790800,essv5718527,essv6390173,essv5525436,essv5792661,essv5455457,essv6207058,essv5695013,essv6040682,essv5619959,essv6395431,essv5754352,essv6470268,essv5580077,essv6593828,essv5657182,essv5891577,essv5468302,essv6011822,essv5445907,essv6397348,essv5669178,essv5914215,essv5584199,essv6496217,essv5429972,essv5851281,essv5718766,essv5862358,essv5764782,essv6579998,essv5731908,essv6237314,essv5480437,essv6260811,essv5576029,essv5782772,essv5462741,essv6001124,essv5710458,essv6494997,essv5671159,essv6009350,essv5766200,essv6409615,essv5759384,essv6254490,essv5425839,essv6026626,essv5593442,essv6172272,essv5436209,essv5918981,essv5586893,essv5907229,essv5409673,essv6414649,essv5709559,essv6414749,essv5444318,essv5828845,essv5735936,essv6195976,essv5625809,essv6034621,essv5742125,essv5796023,essv5700429,essv6420096,essv5765320,essv6162983,essv5507486,essv6421277,essv5460824,essv6421493,essv5619817,essv5908317,essv5693520,essv5857215,essv5645752,essv6426524,essv5454654,essv5934353,essv5764796,essv5878980,essv5404760,essv5811643,essv5659417,essv6431479,essv5557671,essv6433499,essv5624570,essv5814198,essv5697605,essv5825090,essv5675048,essv6045932,essv5645674,essv6438894,essv5625067,essv6010525,essv5601001,essv6457412,essv5591604,essv5778315,essv5544138,essv6087791,essv5514146,essv6440640,essv5738061,essv6499923,essv5595811,essv6442475,essv5662498,essv5824039,essv5596636,essv6443566,essv5474602,essv5795580,essv5743495,essv6445846,essv5539881,essv5934874,essv5656859,essv6088219,essv5539220,essv6448732,essv5581861,essv6449283,essv5434883,essv5799845,essv5490043,essv6026602,essv5738540,essv5971923,essv5502153,essv6451822,essv5507771,essv6209196,essv5592072,essv5999238,essv5667647,essv6149254,essv5613485,essv6454762,essv5444651,essv6455316,essv5420359,essv6455508,essv5492376,essv6455651,essv5554740,essv5779445,essv5570050,essv6069086,essv5655150,essv6143554,essv5692571,essv6108426,essv5436690,essv5822662,essv5537723,essv6051382,essv5632950,essv5936481,essv5488685,essv5849778,essv5513721,essv6062496,essv5745546,essv6255646,essv5584652,essv6181254,essv5564291,essv6010927,essv5439720,essv6589774,essv5745115,essv6086033,essv5488708,essv5787329,essv5676682,essv6132364,essv5642732,essv6533852,essv5493486,essv6568831,essv5462278,essv6198656,essv5440623,essv6284332,essv5487258,essv5931499,essv5551978,essv5860078,essv5447402,essv5881248,essv5546711,essv6199612,essv5626489,essv5958672,essv5553553,essv6101480,essv5423894,essv6196148,essv5491401,essv6297843,essv5481254,essv6567490,essv5493619,essv6194290,essv5610594,essv6241220,essv5638599,essv6134085,essv5570464,essv6299436,essv5423090,essv6236443,essv5544662,essv5989382,essv5674114,essv6000843,essv5662536,essv5922256,essv5690906,essv6301110,essv5514413,essv6301949,essv5763684,essv6155237,essv5417753,essv6553473,essv5593100,essv6228892,essv5425928,essv6211474,essv5545113,essv6178006,essv5679696,essv6512049,essv5769643,essv5958282,essv5563752,essv6305227,essv5552172,essv5969913,essv5467145,essv5871249,essv5510387,essv6231357,essv5683739,essv5928753,essv5721676,essv6222095,essv5416350,essv6088301,essv5527706,essv6543566,essv5690829,essv5956536,essv5580054,essv6582880,essv5649593,essv6028911,essv5525642,essv6587724,essv5633885,essv6233458,essv5649371,essv6203294,essv5618172,essv6239144,essv5554398,essv5840392,essv5735011,essv6313715,essv5722186,essv6541718,essv5591860,essv6315089,essv5711005,essv6042936,essv5416954,essv6281010,essv5552684,essv6315836,essv5568383,essv6092118,essv5400647,essv5850246,essv5473701,essv6316905,essv5432076,essv6317148,essv5742053,essv5814097,essv5440445,essv5996809,essv5738329,essv6086340,essv5530755,essv5859917,essv5472316,essv5927617,essv5461293,essv6036697,essv5645667,essv6028267,essv5613942,essv5950218,essv5561679,essv6256649,essv5412231,essv5937739,essv5769818,essv6249042,essv5460664,essv5829028,essv5744657,essv6227312,essv5657760,essv6593631,essv5574495,essv6190853,essv5515568,essv5975240,essv6242330,essv6174952,essv6120348,essv6040550,essv5935568,essv6145633,essv6069255,essv6327230,essv6054367,essv6489344,essv6328172,essv6213962,essv6482512,essv6272544,essv6329663,essv6329900,essv6219195,essv6025572,essv6268208,essv6060093,essv6100412,essv6593647,essv5966344,essv6285170,essv5960624,essv6069405,essv6109964,essv5949728,essv5888174,essv6335322,essv5869603,essv5836794,essv5874014,essv6260930,essv6337110,essv6337571,essv5933179,essv6257016,essv6004457,essv6521397,essv6265616,essv5986805,essv6082581,essv6228607,essv6339112,essv6199654,essv5835084,essv5907886,essv5864499,essv5815861,essv6490815,essv6263061,essv5779455,essv6534190,essv6541439,essv6343326,essv6568262,essv6168254,essv6343669,essv6344031,essv5995758,essv5835270,essv6161799,essv5794764,essv5883312,essv6079631,essv5924139,essv5864800,essv5929321,essv6472934,essv5948978,essv5906743,essv6484139,essv6211677,essv5795700,essv6159535,essv6510565,essv6009645,essv5838549,essv6121569,essv6248593,essv5982823,essv6176070,essv6489866,essv6503444,essv6001636,essv6466324,essv6355014,essv6050377,essv6089500,essv6243065,essv6003159,essv5828050,essv6148691,essv5810987,essv5915358,essv6358413,essv6358726,essv6477362,essv5988594,essv6534486,essv6472399,essv6361757,essv6003168,essv6253377,essv6535724,essv5931393,essv6539504,essv6112515,essv5964268,essv5987438,essv6003735,essv6518642,essv5797735,essv6364771,essv6260502,essv6365285,essv6159333,essv6038483,essv5849868,essv6009282,essv6485976,essv5851499,essv5860012,essv6370681,essv5872828,essv5949633,essv6371379,essv6116518,essv5851870,essv5906556,essv6494614,essv6123979,essv6271856,essv5854357,essv6225461,essv5984015,essv6563655,essv6213691,essv5953199,essv5864085,essv6376492,essv6123322,essv6267344,essv6524458,essv5814062,essv6048564,essv6571288,essv6281240,essv6099027,essv6584811,essv5849907,essv5891153,essv6595989,essv5942658 M 1151 0 497 "" HG00106,HG00108,HG00111,HG00117,HG00119,HG00124,HG00131,HG00136,HG00139,HG00140,HG00141,HG00142,HG00145,HG00149,HG00152,HG00158,HG00160,HG00177,HG00180,HG00182,HG00188,HG00237,HG00239,HG00246,HG00251,HG00253,HG00257,HG00263,HG00264,HG00265,HG00273,HG00275,HG00276,HG00278,HG00280,HG00282,HG00285,HG00306,HG00309,HG00319,HG00320,HG00324,HG00325,HG00326,HG00327,HG00328,HG00335,HG00337,HG00342,HG00343,HG00344,HG00345,HG00346,HG00353,HG00361,HG00377,HG00404,HG00421,HG00422,HG00428,HG00473,HG00475,HG00479,HG00500,HG00513,HG00533,HG00534,HG00536,HG00556,HG00559,HG00566,HG00578,HG00581,HG00583,HG00584,HG00589,HG00590,HG00595,HG00610,HG00611,HG00613,HG00619,HG00626,HG00634,HG00638,HG00640,HG00654,HG00656,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00704,HG00705,HG00708,HG00731,HG01047,HG01052,HG01060,HG01061,HG01069,HG01070,HG01072,HG01073,HG01080,HG01095,HG01098,HG01102,HG01107,HG01108,HG01112,HG01124,HG01133,HG01134,HG01136,HG01137,HG01140,HG01170,HG01171,HG01173,HG01174,HG01177,HG01183,HG01204,HG01250,HG01251,HG01253,HG01254,HG01334,HG01342,HG01350,HG01353,HG01354,HG01356,HG01357,HG01359,HG01360,HG01365,HG01366,HG01374,HG01375,HG01377,HG01378,HG01384,HG01437,HG01440,HG01441,HG01455,HG01461,HG01465,HG01488,HG01489,HG01491,HG01497,HG01498,HG01550,HG01551,NA06986,NA07000,NA07037,NA07346,NA07347,NA07357,NA10851,NA11831,NA11843,NA11881,NA11892,NA11894,NA11919,NA11920,NA11931,NA11933,NA11994,NA11995,NA12003,NA12005,NA12046,NA12058,NA12154,NA12155,NA12273,NA12342,NA12383,NA12400,NA12414,NA12489,NA12748,NA12763,NA12775,NA12813,NA12827,NA12830,NA12891,NA12892,NA18486,NA18487,NA18489,NA18499,NA18501,NA18502,NA18504,NA18505,NA18507,NA18508,NA18510,NA18511,NA18516,NA18517,NA18519,NA18520,NA18522,NA18523,NA18534,NA18536,NA18539,NA18544,NA18545,NA18547,NA18548,NA18549,NA18553,NA18558,NA18560,NA18563,NA18567,NA18570,NA18571,NA18572,NA18574,NA18577,NA18595,NA18596,NA18603,NA18608,NA18610,NA18613,NA18615,NA18619,NA18620,NA18621,NA18626,NA18633,NA18636,NA18853,NA18856,NA18858,NA18861,NA18867,NA18868,NA18870,NA18871,NA18873,NA18874,NA18907,NA18908,NA18909,NA18910,NA18912,NA18916,NA18923,NA18924,NA18933,NA18934,NA18940,NA18941,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18950,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18963,NA18964,NA18965,NA18967,NA18968,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18980,NA18981,NA18982,NA18984,NA18985,NA18986,NA18987,NA18989,NA18990,NA19000,NA19003,NA19005,NA19007,NA19010,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19062,NA19063,NA19065,NA19066,NA19067,NA19068,NA19070,NA19072,NA19074,NA19076,NA19077,NA19078,NA19079,NA19080,NA19082,NA19083,NA19084,NA19085,NA19087,NA19088,NA19092,NA19093,NA19098,NA19099,NA19102,NA19107,NA19108,NA19114,NA19116,NA19119,NA19129,NA19130,NA19131,NA19137,NA19138,NA19144,NA19147,NA19152,NA19153,NA19159,NA19160,NA19171,NA19172,NA19189,NA19190,NA19197,NA19198,NA19200,NA19201,NA19204,NA19207,NA19209,NA19210,NA19213,NA19225,NA19235,NA19238,NA19239,NA19240,NA19248,NA19256,NA19257,NA19311,NA19312,NA19318,NA19334,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19384,NA19385,NA19390,NA19391,NA19393,NA19396,NA19398,NA19401,NA19403,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19453,NA19455,NA19457,NA19462,NA19466,NA19467,NA19469,NA19470,NA19471,NA19472,NA19474,NA19625,NA19655,NA19660,NA19664,NA19670,NA19684,NA19685,NA19700,NA19703,NA19704,NA19707,NA19712,NA19729,NA19777,NA19779,NA19818,NA19819,NA19834,NA19835,NA19900,NA19901,NA19904,NA19909,NA19914,NA19916,NA19920,NA19985,NA20276,NA20281,NA20289,NA20332,NA20342,NA20503,NA20505,NA20509,NA20512,NA20513,NA20516,NA20519,NA20520,NA20521,NA20525,NA20533,NA20536,NA20537,NA20542,NA20581,NA20582,NA20586,NA20754,NA20759,NA20765,NA20771,NA20795,NA20798,NA20803,NA20804,NA20805,NA20808,NA20813,NA20815,NA20818,NA20819,NA20826 dgv23n106 1 4155146 4155483 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1140212,nsv1113062 M 2 0 2 "" KWS1,KWS2 nsv1011866 1 4190253 4242573 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471886 M 29084 1 0 "" esv3585059 1 4194291 4196163 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844487 M 2504 0 1 "" HG01921 nsv1078722 1 4196028 4196589 CNV insertion Thareja_et_al_2015 25765185 Sequencing nssv3770338 M 1 1 0 "" KWP1 esv1112137 1 4196797 4196797 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4248978 M 2 1 0 "" HuRef esv3585060 1 4197459 4220364 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844488,essv9844489,essv9844490 M 2504 3 0 "" HG00704,HG02481,NA20872 esv7714 1 4204440 4204620 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30155 M 1 0 0 "" nsv1078723 1 4204523 4204610 CNV insertion Thareja_et_al_2015 25765185 Sequencing nssv3766361 M 1 1 0 "" KWP1 nsv1140404 1 4204541 4204676 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987944,nssv3979110 M 2 0 0 "" KWS1,KWS2 nsv1149892 1 4204562 4204634 CNV insertion John_et_al_2014 26484159 Sequencing nssv3998679 M 1 1 0 "" KWB1 nsv1074544 1 4204628 4204726 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772339 M 1 0 1 "" KWP1 dgv24n106 1 4204629 4204717 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1113063,nsv1126968 M 2 0 2 "" KWS1,KWS2 esv3564537 1 4204636 4204688 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9763284 M 767 0 1 "" esv3564648 1 4204667 4204717 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9763395 M 767 0 1 "" esv2619231 1 4204675 4204724 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5231288 M 1 0 1 "" NA18507 nsv1133796 1 4211996 4212055 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969366 M 2 0 1 "" KWS2 nsv527177 1 4216862 4227094 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703573 M 2026 0 1 "" esv3585061 1 4232074 4233113 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844492,essv9844491 M 2504 0 2 "" HG02813,HG03246 nsv830536 1 4240010 4385181 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442018 M 95 1 0 "" esv3585062 1 4263601 4353020 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844493 M 2504 1 0 "" HG02481 esv3564870 1 4271187 4271483 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9763617 M 767 0 1 "" nsv830647 1 4277307 4447580 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442029 M 95 1 0 "" nsv1003469 1 4280170 4302161 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466239 M 29084 0 1 "" esv3585063 1 4284510 4285952 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844512,essv9844494,essv9844511,essv9844496,essv9844501,essv9844510,essv9844495,essv9844500,essv9844497,essv9844499,essv9844498,essv9844504,essv9844509,essv9844503,essv9844502,essv9844505,essv9844508,essv9844507,essv9844506 M 2504 0 19 "" HG01497,HG02013,HG02502,HG02586,HG02715,HG02768,HG02804,HG02882,HG03123,HG03124,HG03372,HG03388,HG03394,HG03464,NA19131,NA19184,NA19238,NA19713,NA20351 dgv8e199 1 4284551 4285955 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2673458,esv2657756 M 1151 0 4 "" NA19238,NA19240,NA19704,NA19713 esv25427 1 4284635 4286005 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14207 M 40 0 1 "" NA19240 esv3390866 1 4288441 4288460 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678401 M 185 1 0 "" NA19240 esv3309075 1 4288449 4288450 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843075,essv7842258,essv7842708 M 185 3 0 "" NA19238,NA19239,NA19240 esv3409348 1 4288450 4288462 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898469,essv8898482,essv8898478,essv8898474,essv8898480,essv8898472,essv8898477,essv8898476,essv8898471,essv8898479,essv8898473,essv8898475 M 185 12 0 "" NA11920,NA12044,NA18489,NA18501,NA18505,NA18517,NA18858,NA18870,NA18912,NA19108,NA19129,NA19190 esv3307842 1 4288454 4288455 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760230,essv7747544,essv7741132,essv7760907,essv7762140,essv7761652,essv7752966,essv7755504,essv7746447,essv7750355,essv7744805,essv7758826,essv7756460,essv7746182,essv7756302 M 185 15 0 "" NA11920,NA12044,NA18489,NA18501,NA18505,NA18517,NA18858,NA18870,NA18912,NA19108,NA19129,NA19190,NA19238,NA19239,NA19240 esv3405644 1 4288466 4288514 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674019,essv8674018,essv8674017 M 185 3 0 "" NA19238,NA19239,NA19240 esv3585065 1 4289375 4295838 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844981 M 2504 0 1 "" NA18645 esv3585066 1 4327442 4349182 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844982 M 2504 1 0 "" HG02481 nsv159648 1 4363044 4363044 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178226 M 24 "" nsv1075054 1 4364350 4364416 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3763220 M 1 0 1 "" KWP1 nsv1145311 1 4364351 4364416 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982402 M 2 0 1 "" KWS1 esv2676117 1 4364476 4366851 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5633387 M 1151 0 1 "" HG00543 esv3585067 1 4364598 4366814 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844983 M 2504 0 1 "" HG00543 nsv545137 1 4381253 4393442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708852 M 17421 0 1 "" nsv545138 1 4390289 4393029 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708853 M 17421 0 1 "" esv28339 1 4391581 4404275 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19856,esv17261,esv14362,esv11599,esv17217 M 40 9 24 "" NA06985,NA11894,NA11931,NA12287,NA12414,NA12489,NA12828,NA12878,NA15510,NA18505,NA18511,NA18517,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv545141 1 4392511 4393082 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708868,nssv708871,nssv708867,nssv708869,nssv708866,nssv708873,nssv708872,nssv708874,nssv708865,nssv708861,nssv708870,nssv708864,nssv708862,nssv708863 M 17421 11 3 "" dgv58n54 1 4392511 4393104 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545149,nsv545140,nsv545139,nsv545142 M 17421 0 9 "" dgv59n54 1 4392511 4393442 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545143,nsv545144 M 17421 28 10 "" nsv545145 1 4392511 4395235 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708916,nssv708915,nssv708914 M 17421 0 3 "" nsv511131 1 4392511 4395812 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626587 M 1 0 1 "" 1 dgv60n54 1 4392511 4403778 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545146,nsv545147,nsv545148 M 17421 3 0 "" dgv61n54 1 4392613 4393442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545151,nsv545150,nsv545152 M 17421 0 4 "" nsv545153 1 4392718 4393442 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708925 M 17421 1 0 "" dgv62n54 1 4392874 4393442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545155,nsv545154 M 17421 0 8 "" esv2505018 1 4396293 4397001 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5228093 M 1 1 0 "" NA18507 esv1619694 1 4396588 4396588 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3918928 M 2 1 0 "" HuRef nsv545156 1 4403573 4403670 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708934,nssv708935 M 17421 0 2 "" nsv1140744 1 4403583 4403693 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3992251 M 2 0 1 "" KWS1 esv3585068 1 4410747 4419657 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844984 M 2504 0 1 "" HG01670 esv3585069 1 4418628 4430107 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844985 M 2504 0 1 "" HG00384 esv275066 1 4421060 4424115 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585519 M 1250 0 1 "" dgv29e59 1 4428892 4430090 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3376842,esv3368163 M 185 2 0 "" NA19239,NA19240 esv3565203 1 4436028 4436353 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9763950 M 767 0 1 "" esv2672854 1 4436053 4436357 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6139564,essv6000199,essv6465373 M 1151 0 3 "" HG00123,HG00257,HG01375 nsv830759 1 4447581 4669361 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442051,nssv1442040 M 95 0 2 LOC284661 nsv1008790 1 4453160 4464442 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482262 M 29084 1 0 "" esv3893878 1 4468747 4496256 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25797727 M 3017 0 1 LOC284661 esv2213507 1 4480157 4480574 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4764956 M 1 0 1 LOC284661 NA18507 esv1543124 1 4480354 4480416 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4354508 M 2 0 1 LOC284661 HuRef esv2672972 1 4488122 4488222 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6573552,essv5769901,essv6116106,essv5978506,essv6538357,essv5837934,essv6043739,essv5714456,essv5685157,essv5614695,essv6054418,essv5592587 M 1151 0 12 "" HG00419,HG00500,HG00614,HG00701,NA18546,NA18611,NA18622,NA18947,NA18949,NA18951,NA18956,NA19385 nsv545157 1 4523357 4552802 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708936 M 17421 1 0 "" dgv4e214 1 4525729 4531357 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing esv3585071,esv3585070 M 2504 0 2 "" HG02505,HG02554 esv3585072 1 4526142 4531352 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9844990,essv9844992,essv9844991 M 2504 3 0 "" HG01396,HG02006,NA19451 esv2661002 1 4531112 4531246 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5772876,essv5966210,essv6134925 M 1151 0 3 "" HG01350,NA19403,NA19428 esv3310012 1 4532053 4532054 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837624,essv7837087 M 185 2 0 "" NA19239,NA19240 esv3436839 1 4532055 4532081 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674025 M 185 1 0 "" NA19239 nsv472740 1 4557950 4557950 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018924 M 9 1 0 "" NA18555 esv3585074 1 4561018 4564867 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845055 M 2504 0 1 "" NA18975 nsv460394 1 4573989 4592116 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536980 M 1557 0 1 "" HGDP01098 nsv1150138 1 4580748 4580914 CNV deletion John_et_al_2014 26484159 Sequencing nssv4003434 M 1 0 1 "" KWB1 esv3565314 1 4580812 4580909 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9764061 M 767 0 1 "" esv2671580 1 4580844 4581049 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6482185,essv5859093,essv6229009,essv5710584,essv6104316,essv5638302,essv6299431,essv5403681,essv6587502,essv5930263,essv6231661,essv5422846,essv6096784,essv6002759,essv6099990,essv5590938,essv6266311,essv5562243,essv6521795,essv5720705,essv6246274,essv5483632,essv6062337,essv5922543,essv6569382,essv5731698,essv6363560,essv6037263,essv6366529,essv5661666,essv6368850,essv5501578,essv6374513,essv5972701,essv6257927,essv5874860,essv6538900,essv5521901,essv6208030,essv5533759,essv5666271,essv5976681,essv5764373,essv5865402,essv5862798,essv5407184,essv5992912 M 1151 0 47 "" HG00111,HG00237,HG00252,HG00254,HG00257,HG00271,HG00275,HG00276,HG00277,HG00281,HG00282,HG00284,HG00310,HG00313,HG00318,HG00319,HG00323,HG00328,HG00329,HG00334,HG00335,HG00337,HG00339,HG00343,HG00478,HG00534,HG00584,HG00619,HG01051,HG01066,HG01072,HG01107,HG01108,HG01174,HG01187,HG01334,HG01374,HG01440,NA18520,NA18534,NA18537,NA18599,NA18605,NA19379,NA19381,NA19394,NA20513 nsv1124176 1 4580900 4581064 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3975484 M 2 0 1 "" KWS1 nsv1075993 1 4580916 4581177 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766771 M 1 0 1 "" KWP1 esv1006796 1 4596030 4602089 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586737 M 3 0 1 "" HuRef esv21437 1 4597917 4603368 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13444 M 40 0 1 "" NA18861 esv2469165 1 4603290 4604366 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5375102 M 1 1 0 "" NA18507 esv995887 1 4603762 4603762 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569284 M 3 1 0 "" HuRef esv1262838 1 4603782 4603782 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3924372 M 2 1 0 "" HuRef nsv1076952 1 4635965 4636019 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3770348 M 1 0 1 "" KWP1 nsv953824 1 4673301 4678700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000140 M 1 0 1 "" BILGI_BIOE esv2398993 1 4676313 4676822 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4895725 M 1 0 1 "" NA18507 esv3565425 1 4676496 4676645 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9764172 M 767 0 1 "" nsv1072050 1 4676496 4676658 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764718 M 1 0 1 "" KWP1 esv2658197 1 4676497 4676644 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6578430,essv6235618,essv6551957,essv6510967,essv6570959,essv6485722,essv6587508,essv6386889,essv6580955,essv5956711,essv6589744,essv6396763,essv6549251,essv6401699,essv6561280,essv6103413,essv6551775,essv5796451,essv5624213,essv6150504,essv5656641,essv6133000,essv5445628,essv6410115,essv5412484,essv6412559,essv5446984,essv6477773,essv5708378,essv6536116,essv5407800,essv5923630,essv5531218,essv6418000,essv5669101,essv5970293,essv5621909,essv6185984,essv5451670,essv6420799,essv5718450,essv5768132,essv5525380,essv5996438,essv5690322,essv6165117,essv5492548,essv5833924,essv5680392,essv6147526,essv5738365,essv6440247,essv5504528,essv5999686,essv5490017,essv6495919,essv5488638,essv6003061,essv5407868,essv5948491,essv5586772,essv6452512,essv5455064,essv6004021,essv5628805,essv6106046,essv5491259,essv6029957,essv5640486,essv5823142,essv5666262,essv6088752,essv5494920,essv6177835,essv5692595,essv6288614,essv5488930,essv6111236,essv5434102,essv5755317,essv5434110,essv5821408,essv5669835,essv5817691,essv5625990,essv6462194,essv5679766,essv5790060,essv5700422,essv6013490,essv5651641,essv6035492,essv5565994,essv6157654,essv5628346,essv5773359,essv5690863,essv5991829,essv5466375,essv6300955,essv5590110,essv6303440,essv5588715,essv6469647,essv5595406,essv5881960,essv5549301,essv6462347,essv5532520,essv5852026,essv5545152,essv6307983,essv5636975,essv5934882,essv5737114,essv5912276,essv5628898,essv5935021,essv5743042,essv5772039,essv5434435,essv6194615,essv6313667,essv6187654,essv5909082,essv6039205,essv6320726,essv6201371,essv6210893,essv6127008,essv6149495,essv6170218,essv6323215,essv6156671,essv6256947,essv6276284,essv6325599,essv6045522,essv6326323,essv6082959,essv5935035,essv6130018,essv5895546,essv6469110,essv5917912,essv6220185,essv6167600,essv5906173,essv6198829,essv6520463,essv6514653,essv6058464,essv6351731,essv6352455,essv5858536,essv6011694,essv6261916,essv5869103,essv6360320,essv5867660,essv6200790,essv6362493,essv6522193,essv5918827,essv5812387,essv5991881,essv5990605,essv6524956,essv5911545,essv5849873,essv5764573,essv6024062,essv6465232,essv6169913,essv6099242,essv6129356,essv6279379,essv6160512,essv6494304,essv6005288,essv6064479,essv6492515 M 1151 0 182 "" HG00114,HG00125,HG00136,HG00375,HG00421,HG00437,HG00442,HG00473,HG00475,HG00478,HG00512,HG00513,HG00524,HG00530,HG00534,HG00536,HG00583,HG00607,HG00608,HG00611,HG00614,HG00619,HG00620,HG00628,HG00637,HG00657,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00699,HG00705,HG00731,HG01066,HG01073,HG01083,HG01097,HG01171,HG01177,HG01354,HG01440,NA07051,NA12546,NA12889,NA12891,NA18486,NA18487,NA18488,NA18511,NA18517,NA18523,NA18526,NA18530,NA18532,NA18538,NA18541,NA18544,NA18545,NA18546,NA18547,NA18549,NA18552,NA18553,NA18559,NA18561,NA18563,NA18566,NA18571,NA18572,NA18573,NA18595,NA18596,NA18605,NA18610,NA18612,NA18613,NA18616,NA18620,NA18624,NA18628,NA18631,NA18632,NA18633,NA18637,NA18638,NA18867,NA18870,NA18874,NA18912,NA18933,NA18941,NA18944,NA18949,NA18951,NA18952,NA18953,NA18960,NA18961,NA18963,NA18968,NA18974,NA18977,NA18980,NA18985,NA18989,NA18991,NA19000,NA19002,NA19004,NA19007,NA19054,NA19055,NA19057,NA19065,NA19066,NA19068,NA19070,NA19077,NA19080,NA19082,NA19084,NA19085,NA19087,NA19088,NA19102,NA19107,NA19108,NA19116,NA19147,NA19189,NA19198,NA19207,NA19210,NA19213,NA19239,NA19240,NA19312,NA19315,NA19318,NA19319,NA19324,NA19331,NA19334,NA19346,NA19347,NA19359,NA19374,NA19375,NA19379,NA19380,NA19381,NA19382,NA19383,NA19391,NA19428,NA19431,NA19434,NA19439,NA19453,NA19455,NA19462,NA19471,NA19473,NA19625,NA19712,NA19722,NA19818,NA19834,NA19982,NA19985,NA20278,NA20282,NA20287,NA20502,NA20505,NA20528,NA20544,NA20581,NA20819 esv2988766 1 4676509 4676644 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7258333 M 1 0 1 "" HuRef nsv545158 1 4704955 4727086 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708937 M 17421 0 1 AJAP1 esv3330361 1 4706892 4709190 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692349 M 185 1 0 "" NA19240 nsv1110990 1 4709240 4709332 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3961419 M 2 0 0 "" KWS1 esv3585075 1 4709787 4714215 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845056 M 2504 0 1 "" HG04161 nsv825475 1 4713119 4717435 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433404 M 31 1 0 AJAP1 NA18526 nsv1076000 1 4713199 4716100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764200 M 1 0 1 AJAP1 KWP1 nsv1136063 1 4714200 4717900 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989669 M 2 0 1 AJAP1 KWS2 nsv1126171 1 4714300 4716100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984400 M 2 0 1 AJAP1 KWS1 esv1009421 1 4734774 4738126 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565733 M 3 0 1 AJAP1 HuRef nsv460505 1 4737531 4754057 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537066 M 1557 0 1 AJAP1 1780862093_A nsv545159 1 4737531 4754057 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172594 M 17421 0 1 AJAP1 1780862093_A nsv520031 1 4747737 4751030 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701964,nssv683157,nssv660165 M 2026 0 3 AJAP1 nsv521535 1 4747737 4772717 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694458 M 2026 0 1 AJAP1 nsv953834 1 4749601 4786100 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000251 M 1 0 1 AJAP1 BILGI_BIOE nsv460617 1 4751030 4787119 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537158 M 1557 0 1 AJAP1 NINDS_66 nsv545160 1 4751030 4787119 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173647 M 17421 0 1 AJAP1 NINDS_66 nsv830870 1 4795386 4981299 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442062 M 95 0 1 AJAP1 esv2651800 1 4800146 4801190 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5191133 M 1 1 0 AJAP1 NA18507 nsv1076958 1 4813069 4813137 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764565 M 1 0 1 AJAP1 KWP1 nsv1126969 1 4818502 4818583 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985256 M 2 0 1 AJAP1 KWS1 nsv830981 1 4822265 4998251 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442074 M 95 1 0 AJAP1 esv3585076 1 4823184 4829674 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845057 M 2504 0 1 AJAP1 HG01369 esv3409614 1 4827658 4827704 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740928 M 185 1 0 AJAP1 NA12878 nsv1076959 1 4871246 4871319 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764294 M 1 0 1 "" KWP1 nsv1113064 1 4871247 4871319 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982102,nssv3990224 M 2 0 2 "" KWS1,KWS2 nsv521327 1 4872571 4874505 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697933 M 2026 0 1 "" dgv9e199 1 4882138 4883038 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2658527,esv2662806 M 1151 0 6 "" HG00150,HG00251,HG00256,HG00418,NA18990,NA19003 esv3585077 1 4882232 4883040 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845087,essv9845152,essv9845060,essv9845069,essv9845086,essv9845059,essv9845058,essv9845063,essv9845061,essv9845068,essv9845062,essv9845067,essv9845064,essv9845066,essv9845065,essv9845076,essv9845071,essv9845085,essv9845070,essv9845072,essv9845075,essv9845074,essv9845073,essv9845084,essv9845079,essv9845078,essv9845077,essv9845080,essv9845083,essv9845082,essv9845081,essv9845092,essv9845118,essv9845101,essv9845151,essv9845089,essv9845091,essv9845088,essv9845090,essv9845095,essv9845100,essv9845094,essv9845093,essv9845099,essv9845096,essv9845098,essv9845097,essv9845103,essv9845117,essv9845108,essv9845102,essv9845107,essv9845104,essv9845106,essv9845105,essv9845111,essv9845116,essv9845110,essv9845109,essv9845112,essv9845115,essv9845114,essv9845113,essv9845120,essv9845150,essv9845119,essv9845133,essv9845124,essv9845123,essv9845122,essv9845121,essv9845125,essv9845132,essv9845127,essv9845126,essv9845128,essv9845131,essv9845130,essv9845129,essv9845135,essv9845149,essv9845140,essv9845134,essv9845139,essv9845136,essv9845138,essv9845137,essv9845143,essv9845148,essv9845142,essv9845141,essv9845144,essv9845147,essv9845146,essv9845145,essv9845153 M 2504 0 96 "" HG00150,HG00251,HG00256,HG00625,HG01589,HG01773,HG01811,HG02070,HG02190,HG02494,HG02601,HG02651,HG02687,HG02688,HG02734,HG02736,HG02790,HG02792,HG03012,HG03022,HG03488,HG03491,HG03603,HG03640,HG03644,HG03645,HG03646,HG03673,HG03679,HG03680,HG03689,HG03692,HG03706,HG03730,HG03731,HG03744,HG03745,HG03755,HG03757,HG03765,HG03767,HG03771,HG03772,HG03780,HG03789,HG03793,HG03805,HG03808,HG03812,HG03824,HG03851,HG03863,HG03866,HG03870,HG03871,HG03905,HG03908,HG03940,HG03947,HG03953,HG03960,HG03963,HG03967,HG03969,HG03973,HG03977,HG03990,HG03991,HG03995,HG04023,HG04026,HG04039,HG04059,HG04060,HG04096,HG04099,HG04131,HG04141,HG04177,HG04212,HG04216,NA11995,NA18990,NA19003,NA20845,NA20852,NA20882,NA20887,NA20890,NA20894,NA20900,NA20904,NA20905,NA21103,NA21108,NA21144 esv3565759 1 4882345 4883040 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9764506 M 767 0 1 "" esv3585078 1 4899296 4900544 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845154 M 2504 0 1 "" HG00766 esv3585079 1 4903380 4919300 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845155 M 2504 0 1 "" HG01918 nsv632 1 4909413 4913572 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2960 M 9 1 0 "" NA18555 nsv473410 1 4937930 4937930 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018919 M 9 1 0 "" NA19129 nsv958396 1 4967651 4970598 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003727 M 1 0 1 "" BILGI_BIOE dgv14n100 1 4997503 5012355 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1006006,nsv1006916,nsv998217 M 29084 5 0 "" esv3310485 1 4999187 5000196 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843542 M 185 1 0 "" NA19240 nsv1110991 1 4999501 4999561 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3961420 M 2 0 0 "" KWS1 esv3328269 1 4999559 4999762 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652090 M 185 1 0 "" NA19240 esv3450010 1 4999657 4999773 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808971 M 185 1 0 "" NA12878 esv3382602 1 5006192 5006990 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692354 M 185 1 0 "" NA19239 esv3585080 1 5028066 5056207 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845156 M 2504 0 1 "" NA19473 dgv10e199 1 5028103 5056368 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2659456,esv2674284 M 1151 0 1 "" NA19473 nsv1014919 1 5028204 5055851 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478565 M 29084 0 1 "" esv2764243 1 5028216 5060238 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004914,essv7004913,essv7004916,essv7004915 M 1109 0 4 "" RW_0164,RW_0321,RW_0351,RW_0579 nsv521101 1 5031379 5054350 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682279,nssv687649 M 2026 0 2 "" nsv474096 1 5038297 5038297 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011788 M 9 1 0 "" NA12156 nsv478576 1 5040904 5040904 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018520 M 9 1 0 "" NA18507 nsv476165 1 5051613 5051613 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012866 M 9 1 0 "" NA12878 esv2483299 1 5053352 5054468 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5225073 M 1 0 1 "" NA18507 esv3585082 1 5063288 5063889 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845182,essv9845181,essv9845172,essv9845175,essv9845180,essv9845174,essv9845173,essv9845176,essv9845179,essv9845178,essv9845177,essv9845183,essv9845188,essv9845187,essv9845184,essv9845186,essv9845185,essv9845191,essv9845190,essv9845189,essv9845192,essv9845193 M 2504 0 22 "" HG02652,HG02654,HG02737,HG02787,HG03490,HG03600,HG03703,HG03744,HG03817,HG03864,HG03873,HG03886,HG03925,HG03985,HG04059,HG04141,HG04200,NA20863,NA20877,NA20911,NA21112,NA21124 nsv525603 1 5068210 5068955 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701747 M 2026 0 1 "" esv3386646 1 5090040 5090095 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898483 M 185 1 0 "" NA19093 esv3306851 1 5090052 5090053 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7749686 M 185 1 0 "" NA19093 dgv63n54 1 5104037 5170712 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545165,nsv545161,nsv545166 M 17421 4 0 "" nsv1001381 1 5112057 5174005 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472304,nssv3480432,nssv3696762,nssv3479297,nssv3468116,nssv3465441 M 29084 0 6 "" nsv523740 1 5113911 5170712 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699556 M 2026 1 0 "" dgv64n54 1 5113911 5173804 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545163,nsv545162,nsv545167,nsv545164 M 17421 0 7 "" HGDP00529 nsv460839 1 5113911 5173804 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537339 M 1557 0 1 "" HGDP00529 esv3893989 1 5114102 5170712 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25781868,essv25786461 M 3017 0 2 "" esv32797 1 5127270 5168845 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101012 M 51 0 1 "" 21693 esv1109223 1 5135781 5135781 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4201133 M 2 1 0 "" HuRef nsv520723 1 5151245 5164424 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697576 M 2026 1 0 "" esv2675761 1 5163634 5165134 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6419459 M 1151 0 1 "" HG00692 esv3585084 1 5163652 5165101 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845195 M 2504 0 1 "" HG00692 esv3585085 1 5165240 5166206 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845215,essv9845197,essv9845214,essv9845196,essv9845199,essv9845204,essv9845213,essv9845198,essv9845203,essv9845200,essv9845202,essv9845201,essv9845207,essv9845212,essv9845206,essv9845205,essv9845208,essv9845211,essv9845210,essv9845209,essv9845220,essv9845217,essv9845216,essv9845219,essv9845218,essv9845221,essv9845223,essv9845222,essv9845224,essv9845225 M 2504 0 30 "" HG01241,HG01985,HG02317,HG02462,HG02477,HG02573,HG02756,HG02759,HG02808,HG02946,HG03109,HG03129,HG03136,HG03168,HG03224,HG03265,HG03295,HG03367,HG03401,HG03547,NA18923,NA19098,NA19114,NA19117,NA19143,NA19235,NA19238,NA19257,NA19378,NA20340 esv2532762 1 5172047 5172764 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5197882 M 1 1 0 "" NA18507 esv2657993 1 5172334 5173571 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5720924,essv6291611 M 1151 0 2 "" HG00611,HG00654 esv3585086 1 5172414 5173475 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845229,essv9845228,essv9845227,essv9845226,essv9845231,essv9845236,essv9845230,essv9845235,essv9845232,essv9845234,essv9845233,essv9845239,essv9845238,essv9845237,essv9845240,essv9845243,essv9845242,essv9845241 M 2504 0 18 "" HG00533,HG00596,HG00611,HG00654,HG00698,HG01597,HG01794,HG01850,HG02035,HG02373,HG02379,HG02384,HG02408,NA18618,NA18625,NA18639,NA18975,NA18997 esv1289856 1 5172490 5172490 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3630167 M 2 1 0 "" HuRef esv3585087 1 5173809 5179107 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845246,essv9845245,essv9845244,essv9845247 M 2504 0 4 "" HG00593,NA18635,NA18989,NA19011 esv2464561 1 5180854 5180930 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5250667 M 1 0 1 "" NA18507 esv27138 1 5196671 5197414 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13523 M 40 0 1 "" NA19240 esv2465114 1 5220151 5220896 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5290540 M 1 1 0 "" NA18507 nsv1110992 1 5220219 5220290 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3961421 M 2 0 0 "" KWS1 esv2918 1 5220261 5220607 CNV loss Wang_et_al_2008 18987735 Sequencing essv25359 M 1 0 1 "" YH esv3585088 1 5238714 5239827 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845248 M 2504 0 1 "" HG02087 nsv1120186 1 5274584 5274851 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960949 M 2 0 0 "" KWS1 nsv999560 1 5278606 5326471 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3462759 M 29084 1 0 "" nsv521242 1 5283942 5287108 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697864 M 2026 0 1 "" nsv545168 1 5284023 5305364 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708948 M 17421 0 1 "" nsv1144343 1 5285293 5285363 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995090 M 2 0 1 "" KWS1 esv2758917 1 5289767 5536678 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757720 M 270 1 0 "" NA19003 esv3585089 1 5302073 5304597 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845252,essv9845251,essv9845250,essv9845249,essv9845255,essv9845260,essv9845254,essv9845253,essv9845256,essv9845259,essv9845258,essv9845257 M 2504 0 12 "" HG03115,HG03135,HG03193,HG03212,HG03464,HG03470,NA18912,NA19020,NA19152,NA19452,NA19457,NA19461 esv2656583 1 5302112 5304560 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5642149,essv5836252 M 1151 0 2 "" NA19452,NA19461 esv1963263 1 5306024 5306450 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4703012 M 1 0 1 "" NA18507 esv3566092 1 5306681 5306751 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9764839 M 767 0 1 "" nsv1137720 1 5306681 5306751 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990225 M 2 0 1 "" KWS2 nsv460950 1 5330757 5348270 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537425 M 1557 0 1 "" HGDP00998 nsv545169 1 5330757 5348270 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173649 M 17421 0 1 "" HGDP00998 nsv1113065 1 5349996 5350180 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990226,nssv3995091 M 2 0 2 "" KWS1,KWS2 esv2671665 1 5350910 5351276 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6509635,essv5779798,essv6246074,essv5659484,essv6296706,essv5440076,essv6540368,essv5856400,essv6492274,essv5996842,essv6328526,essv5800925,essv6052126 M 1151 0 13 "" HG00160,HG00278,HG00280,HG00375,HG00731,HG01551,NA12155,NA12282,NA12892,NA19663,NA19703,NA19749,NA20507 nsv1144344 1 5350910 5351276 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995092 M 2 0 1 "" KWS1 esv3566314 1 5350910 5351287 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9765061 M 767 0 1 "" esv3585090 1 5359262 5362142 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845261,essv9845263,essv9845262,essv9845268,essv9845264,essv9845267,essv9845266,essv9845265,essv9845271,essv9845270,essv9845269,essv9845272,essv9845274,essv9845273 M 2504 0 14 "" HG00638,HG01247,HG02477,HG02621,HG02628,HG02947,HG03027,HG03081,HG03130,HG03172,NA18856,NA19319,NA19451,NA19472 esv2663969 1 5359279 5362135 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5451969,essv5861421,essv5404073,essv6181377,essv5526874 M 1151 0 5 "" HG00638,NA18856,NA19319,NA19451,NA19472 esv2675805 1 5364059 5364212 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6396847,essv6038176,essv6402807,essv5932932,essv6276849,essv6135067,essv6431643,essv6021653,essv6459561,essv5395854,essv6328751,essv5454067,essv6515529,essv5950071,essv6289486,essv5691159,essv6352895,essv5535297,essv6364649,essv5628770,essv6368144,essv5891462,essv6209727,essv5920700,essv6374400,essv6078532,essv6312434,essv5856831,essv5400386,essv5487076,essv6015776,essv5510135,essv5716908,essv6017677,essv5866775,essv5437083,essv6010416,essv5631414,essv6097545,essv5416167,essv5723271,essv5904658,essv5564616,essv6003274,essv5745198,essv5488147,essv5668653,essv5495326,essv5620206,essv5816756,essv6108303,essv5640185,essv6048366,essv6100647 M 1151 0 54 "" HG00111,HG00137,HG00139,HG00140,HG00252,HG00253,HG00271,HG00275,HG00281,HG00282,HG00310,HG00313,HG00320,HG00321,HG00330,HG00337,HG00338,HG00339,HG00437,HG00442,HG00473,HG00475,HG00476,HG00500,HG00513,HG00543,HG00556,HG00584,HG00590,HG00619,HG00650,HG00692,HG00698,HG00699,HG00701,HG00705,HG01070,HG01075,HG01083,HG01173,HG01174,HG01334,NA18530,NA18557,NA18559,NA18611,NA18612,NA18613,NA18620,NA18622,NA18632,NA18636,NA19404,NA19920 nsv1137197 1 5364120 5364175 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3975891 M 2 0 1 "" KWS1 nsv1003726 1 5383308 5425109 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466555 M 29084 1 0 "" nsv481312 1 5383950 5383950 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012002 M 9 0 0 "" nsv473792 1 5383951 5383951 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012563 M 9 1 0 "" NA12156 nsv480602 1 5385217 5385217 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017310 M 9 0 0 "" nsv474984 1 5386033 5386033 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018294 M 9 1 0 "" NA18956 nsv477558 1 5387318 5387318 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012506 M 9 1 0 "" NA18517 nsv481266 1 5387853 5387853 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012335 M 9 0 0 "" nsv479925 1 5390868 5390868 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014061 M 9 0 0 "" nsv473968 1 5391044 5391044 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015924 M 9 1 0 "" NA12156 nsv10605 1 5393590 5395013 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24593,nssv28532,nssv29260,nssv21430 M 31 4 0 "" NA07029,NA07048,NA12802,NA18504 nsv479465 1 5394474 5394474 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020534 M 9 0 0 "" nsv479520 1 5396840 5396840 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013929 M 9 0 0 "" nsv474387 1 5396914 5396914 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015116 M 9 1 0 "" NA18956 nsv480617 1 5397440 5397440 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011387 M 9 0 0 "" nsv474375 1 5397714 5397714 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016753 M 9 1 0 "" NA18956 nsv479836 1 5399048 5399048 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019925 M 9 0 0 "" nsv472280 1 5400958 5400958 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019293 M 9 1 0 "" NA18555 nsv481139 1 5402322 5402322 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013782 M 9 0 0 "" nsv479964 1 5403347 5403347 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015499 M 9 0 0 "" esv2677954 1 5403415 5404684 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5814474 M 1151 0 1 "" NA19703 esv3585092 1 5403433 5404651 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845298 M 2504 0 1 "" NA19703 nsv480009 1 5403543 5403543 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014433 M 9 0 0 "" esv3585093 1 5406463 5408838 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845299 M 2504 0 1 "" HG02087 esv3585094 1 5409220 5411126 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845300 M 2504 0 1 "" HG02087 nsv1142050 1 5447229 5447439 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3978767,nssv3960950 M 2 0 0 "" KWS1,KWS2 nsv1147016 1 5464945 5465008 CNV deletion John_et_al_2014 26484159 Sequencing nssv3998373 M 1 0 1 "" KWB1 esv2259894 1 5474029 5474457 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4831068 M 1 0 1 "" NA18507 nsv160607 1 5474168 5474241 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179185 M 24 "" nsv1151652 1 5474191 5474279 CNV deletion John_et_al_2014 26484159 Sequencing nssv4003075 M 1 0 1 "" KWB1 nsv1076011 1 5474211 5474287 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3762500 M 1 0 1 "" KWP1 esv2988852 1 5474212 5474287 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7258419 M 1 0 1 "" HuRef esv3566536 1 5474212 5474287 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9765283 M 767 0 1 "" nsv1144345 1 5474212 5474287 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995093 M 2 0 1 "" KWS1 esv1028089 1 5474230 5474305 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4224996 M 2 0 1 "" HuRef nsv10716 1 5475030 5476810 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26903 M 31 1 0 "" NA19221 nsv479240 1 5485341 5485341 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014489 M 9 0 0 "" nsv472893 1 5485473 5485473 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019845 M 9 1 0 "" NA19129 nsv479719 1 5485623 5485623 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018029 M 9 0 0 "" nsv481014 1 5486179 5486179 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012558 M 9 0 0 "" nsv481354 1 5486533 5486533 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019584 M 9 0 0 "" nsv473687 1 5488909 5488909 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010833 M 9 1 0 "" NA19129 nsv477009 1 5489582 5489582 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019418 M 9 1 0 "" NA12878 nsv545170 1 5489867 5541205 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708949 M 17421 0 1 "" nsv481592 1 5490508 5490508 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012018 M 9 0 0 "" nsv479588 1 5491671 5491671 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014470 M 9 0 0 "" nsv480794 1 5493337 5493337 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019522 M 9 0 0 "" nsv831092 1 5493368 5643744 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442085 M 95 1 0 MIR4417 nsv481180 1 5493915 5493915 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018352 M 9 0 0 "" nsv473316 1 5496757 5496757 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014447 M 9 1 0 "" NA19129 nsv479984 1 5498241 5498241 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012502 M 9 0 0 "" nsv480922 1 5498821 5498821 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020124 M 9 0 0 "" nsv475183 1 5500631 5500631 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018681 M 9 1 0 "" NA19240 nsv473909 1 5500940 5500940 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018625 M 9 1 0 "" NA12156 nsv475512 1 5503844 5503844 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011760 M 9 1 0 "" NA19240 nsv1129866 1 5559501 5559625 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965000 M 2 0 1 "" KWS2 nsv1076966 1 5559507 5559722 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771579 M 1 0 1 "" KWP1 nsv1130266 1 5559508 5559722 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982404,nssv3964752 M 2 0 2 "" KWS1,KWS2 esv2607553 1 5559509 5559610 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5236789 M 1 0 1 "" NA18507 nsv1129455 1 5559590 5559708 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3962909 M 2 0 0 "" KWS1 nsv953925 1 5597801 5607700 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3000303 M 1 1 0 "" BILGI_BIOE nsv478357 1 5605278 5605278 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011835 M 9 1 0 "" NA18507 nsv527712 1 5623683 5625566 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704192 M 2026 0 1 MIR4417 dgv2n21 1 5624529 5625566 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv519513,nsv526005 M 2026 0 4 "" esv2669319 1 5633688 5633986 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5587877,essv6463945,essv5603993,essv6410575,essv5560026,essv6498314,essv5607342,essv6208210,essv5483457,essv6429604,essv5399348,essv6452914,essv5400393,essv6305492,essv5889786,essv6036715,essv5636736,essv6334378,essv5478691,essv6506229,essv5608106,essv6346612,essv5453155,essv6476038,essv5826814,essv6355678,essv5928382,essv6149955,essv6173891,essv6234181,essv6496995 M 1151 0 31 "" HG00329,HG00375,HG00501,HG00524,HG01440,NA07051,NA11993,NA12004,NA12044,NA12749,NA12750,NA12813,NA12828,NA18486,NA18523,NA18558,NA18853,NA18916,NA18956,NA18967,NA18972,NA18975,NA19098,NA19171,NA19312,NA19373,NA19374,NA19397,NA19463,NA19625,NA19818 esv3566648 1 5633688 5634013 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9765395 M 767 0 1 "" nsv1076017 1 5641222 5641279 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769895 M 1 0 1 "" KWP1 nsv1133797 1 5641223 5641279 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969367 M 2 0 1 "" KWS2 esv2673462 1 5644646 5645443 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6161251,essv6139149,essv6576477 M 1151 0 3 "" NA19380,NA19382,NA19436 esv3585095 1 5644653 5645445 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845306,essv9845305,essv9845304,essv9845303,essv9845302,essv9845301,essv9845311,essv9845310,essv9845307,essv9845309,essv9845308 M 2504 0 11 "" HG01702,HG02628,HG02643,HG02888,HG03352,HG03558,NA19025,NA19137,NA19380,NA19436,NA19984 esv1008325 1 5653349 5653349 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577403 M 3 1 0 "" HuRef esv1402936 1 5653350 5653350 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3729262 M 2 1 0 "" HuRef esv2165265 1 5663223 5663590 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4655011 M 1 0 1 "" NA18507 nsv1110126 1 5663300 5664600 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3959391 M 2 1 0 "" KWS1 esv2622825 1 5663834 5663894 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5341576 M 1 0 1 "" NA18507 nsv1125167 1 5664423 5664511 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3977972 M 2 1 0 "" KWS2 nsv1116584 1 5664450 5664505 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3978768 M 2 0 0 "" KWS2 esv3585096 1 5668174 5671379 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845312 M 2504 0 1 "" HG03084 nsv1153170 1 5693913 5694015 CNV deletion John_et_al_2014 26484159 Sequencing nssv4001087 M 1 0 1 "" KWB1 nsv1112218 1 5693920 5694024 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965915 M 2 0 1 "" KWS2 nsv945752 1 5713706 5718125 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750273,nssv1750243,nssv2572200,nssv1750231,nssv2572206,nssv1750232,nssv1750285,nssv1750222,nssv1750248,nssv1750229,nssv2572210,nssv1750300,nssv1750309,nssv1750304,nssv1750255,nssv1750250,nssv1750289,nssv1750224,nssv1750281,nssv1750301,nssv1750313,nssv1750228,nssv2572211,nssv1750245,nssv1750288,nssv1750226,nssv1750279,nssv1750227,nssv1750267,nssv1750225,nssv2572202,nssv1750298,nssv2572212,nssv1750302,nssv1750257,nssv1750252,nssv1750265,nssv1750242,nssv1750271,nssv1750307,nssv1750270,nssv1750237,nssv1750287,nssv1750306,nssv1750253,nssv1750230,nssv2572209,nssv1750249,nssv2572207,nssv1750241,nssv1750308,nssv1750303,nssv1750293,nssv1750233,nssv1750296,nssv1750234,nssv1750315,nssv1750235,nssv2572201,nssv1750239,nssv2572198,nssv1750238,nssv1750247,nssv1750305,nssv1750256,nssv1750240,nssv1750266,nssv1750299,nssv1750312,nssv1750223,nssv1750291,nssv1750236,nssv2572213,nssv1750282,nssv2572199,nssv1750297,nssv1750316,nssv1750246,nssv1750263,nssv1750268,nssv2572204,nssv2572205,nssv1750286,nssv1750283,nssv1750311,nssv1750261,nssv1750251,nssv1750278,nssv1750221,nssv1750244,nssv1750254,nssv1750269,nssv2572197,nssv1750276,nssv1750292,nssv1750274,nssv1750294,nssv1750280,nssv2572208,nssv1750260,nssv1750310,nssv1750277,nssv1750284,nssv1750275,nssv1750314,nssv1750258,nssv1750317,nssv1750272,nssv1750290,nssv1750295,nssv1750264,nssv1750259,nssv1750262,nssv2572203 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2736140 1 5715844 5715956 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6906088,essv6675186,essv6707250 M 96 0 3 "" SSM014,SSM032,SSM041 esv3368079 1 5717162 5717162 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740929 M 185 1 0 "" NA12878 dgv30e59 1 5724665 5737163 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3345322,esv3391008,esv3346737,esv3335908,esv3435601,esv3335249 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv3585097 1 5725069 5727357 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845313 M 2504 0 1 "" NA18627 nsv945753 1 5725815 5736612 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750397,nssv2572216,nssv1750403,nssv2572221,nssv1750402,nssv1750392,nssv1750347,nssv1750381,nssv1750340,nssv2572217,nssv1750333,nssv1750371,nssv1750401,nssv1751338,nssv1750327,nssv1750387,nssv1750328,nssv1750369,nssv1750346,nssv1750410,nssv1750349,nssv1750406,nssv1750398,nssv1750345,nssv1750339,nssv1750408,nssv1750329,nssv1750357,nssv1750399,nssv1750362,nssv1750342,nssv1750378,nssv1750325,nssv2572230,nssv1750395,nssv1750356,nssv1750323,nssv2572231,nssv1750322,nssv1750385,nssv1750396,nssv1750386,nssv1750334,nssv1750376,nssv1750404,nssv1750354,nssv1750338,nssv1750359,nssv1750326,nssv1750352,nssv1750320,nssv1750380,nssv1750331,nssv1750411,nssv1750336,nssv2572219,nssv1750335,nssv1750405,nssv1750321,nssv1750350,nssv1750319,nssv1750364,nssv1750337,nssv1751336,nssv1750330,nssv2572222,nssv1750332,nssv1750372,nssv1750324,nssv1750368,nssv1750400,nssv2572226,nssv1750344,nssv2572224,nssv1750393,nssv2572215,nssv1750367,nssv1750390,nssv2572229,nssv1751337,nssv1750353,nssv1750382,nssv1750409,nssv2572223,nssv2572214,nssv1750384,nssv1750394,nssv1750348,nssv2572227,nssv1750363,nssv1750391,nssv1750374,nssv1750355,nssv1750343,nssv1750366,nssv1750358,nssv1750360,nssv1750370,nssv1750377,nssv2572218,nssv1750389,nssv1750383,nssv2572220,nssv1750407,nssv1750351,nssv2572225,nssv1750361,nssv1750379,nssv1750388,nssv1750318,nssv1750375,nssv1750365,nssv1750373,nssv1750341 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1075076 1 5727062 5727132 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771810 M 1 0 1 "" KWP1 nsv1126970 1 5727063 5727132 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985257 M 2 0 1 "" KWS1 dgv25n106 1 5727100 5736100 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1141126,nsv1132277 M 2 2 0 "" KWS1,KWS2 esv2674386 1 5727693 5727959 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5832322,essv6384104,essv5504297,essv6384347,essv5786001,essv6221620,essv5850151,essv6565812,essv5665252,essv6294299,essv5790903,essv6148778,essv5692394,essv6301555,essv5898834,essv6310515,essv5574275,essv6326712,essv5927529,essv6213259,essv5613090,essv6566648,essv6122182,essv6190723,essv5489756,essv6356112,essv5418071,essv6509161,essv5932568,essv6129857,essv5411958,essv6212200,essv6108169,essv6060968,essv5667480,essv5738482,essv6020750,essv5935278,essv5571822,essv5972280,essv5549176,essv5768514,essv5499783 M 1151 0 43 "" HG00251,HG00418,HG00422,HG00427,HG00428,HG00437,HG00448,HG00463,HG00500,HG00534,HG00657,HG00684,HG00689,HG00690,HG00698,HG00701,HG00702,HG00705,HG00708,HG01108,NA18519,NA18549,NA18557,NA18592,NA18636,NA18637,NA18917,NA18945,NA18960,NA19225,NA19359,NA19371,NA19374,NA19377,NA19380,NA19382,NA19384,NA19385,NA19463,NA19703,NA20299,NA20317,NA20322 dgv2e201 1 5727728 5728179 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2736251,esv2736473 M 96 0 9 "" SSM026,SSM029,SSM034,SSM075,SSM078,SSM088,SSM089,SSM097,SSM098 esv2736362 1 5727732 5727890 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6816567,essv6859167,essv6972305 M 96 0 3 "" SSM029,SSM078,SSM088 esv2736584 1 5727967 5728353 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6888992 M 96 0 1 "" SSM097 nsv1132825 1 5728101 5728187 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3987618 M 2 1 0 "" KWS1 nsv956700 1 5728190 5728347 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000519 M 1 0 1 "" BILGI_BIOE nsv953926 1 5730001 5736500 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3000315 M 1 1 0 "" BILGI_BIOE nsv1149880 1 5730199 5733400 CNV duplication John_et_al_2014 26484159 Sequencing nssv3998666 M 1 1 0 "" KWB1 nsv1075363 1 5730299 5736100 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3768871 M 1 1 0 "" KWP1 nsv1122286 1 5731415 5731479 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969368,nssv3982405 M 2 0 2 "" KWS1,KWS2 nsv1133798 1 5731629 5731701 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969737,nssv3985258 M 2 0 2 "" KWS1,KWS2 esv2474640 1 5731828 5734689 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5304912 M 1 1 0 "" NA18507 nsv1119658 1 5732233 5732301 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982103 M 2 0 1 "" KWS1 dgv26n106 1 5732637 5732688 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1133799,nsv1145314 M 2 0 2 "" KWS1,KWS2 nsv1113066 1 5732840 5732895 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990227,nssv3995094 M 2 0 2 "" KWS1,KWS2 esv3894100 1 5734013 5770265 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25798932 M 3017 0 1 "" nsv1122287 1 5734976 5735034 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969738 M 2 0 1 "" KWS2 esv3585098 1 5738969 5746950 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845314 M 2504 0 1 "" NA18971 nsv1133800 1 5746343 5746441 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969370 M 2 0 1 "" KWS2 nsv545171 1 5753350 5887140 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708950 M 17421 1 0 "" nsv523099 1 5758772 5765353 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698792 M 2026 1 0 "" esv2736695 1 5761484 5761660 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6892304 M 96 0 1 "" SSM098 esv2662153 1 5766984 5767216 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6320453,essv5689657,essv6036122 M 1151 0 3 "" NA19372,NA19399,NA20340 nsv521706 1 5790498 5790655 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698329 M 2026 1 0 "" nsv1115332 1 5795700 5799800 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976384 M 2 1 0 "" KWS2 esv2736806 1 5796228 5796823 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6843732,essv6679146,essv6725837,essv6703847 M 96 0 4 "" SSM011,SSM033,SSM040,SSM046 esv2736917 1 5796331 5796449 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6843732 M 96 0 1 "" SSM011 esv2737028 1 5796331 5796639 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6843732,essv6725837,essv6703847 M 96 0 3 "" SSM011,SSM040,SSM046 nsv1005415 1 5802073 5820657 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473594 M 29084 0 1 "" esv2165525 1 5804042 5804503 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4933008 M 1 0 1 "" NA18507 esv2737139 1 5804090 5804332 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6686143,essv6895833 M 96 0 2 "" SSM035,SSM099 nsv470688 1 5811124 5913621 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547687,nssv547688 M 443 0 2 "" HGDP00546,HGDP00550 esv3408840 1 5832758 5832777 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863671,essv7863672 M 185 2 0 "" NA12005,NA18871 nsv508723 1 5837275 6032008 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619765,nssv619764,nssv623770 M 4 2 0 MIR4689,NPHP4 NA10860,NA18994 nsv1113067 1 5855734 5855819 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967958 M 2 0 1 "" KWS2 nsv1120187 1 5855862 5855947 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960951 M 2 0 0 "" KWS1 esv2737251 1 5855952 5856170 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6832584,essv6776920,essv6843870,essv6836177,essv6921698,essv6668917,essv6828989,essv6917408 M 96 0 8 "" SSM017,SSM018,SSM031,SSM067,SSM081,SSM082,SSM083,SSM085 esv2444036 1 5862653 5863401 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5245268 M 1 1 0 "" NA18507 dgv31e59 1 5868165 5870163 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330767,esv3376026,esv3440591 M 185 3 0 "" NA19238,NA19239,NA19240 nsv1153099 1 5868199 5869800 CNV duplication John_et_al_2014 26484159 Sequencing nssv3998132 M 1 1 0 "" KWB1 esv2659247 1 5869340 5869558 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5678721,essv6582137,essv5729154,essv6378969,essv5637654,essv6478707,essv5403979,essv6555572,essv5527474,essv6288594,essv5744973,essv6388559,essv5618174,essv6558526,essv5580177,essv6278486,essv5438361,essv6389765,essv5724237,essv6391005,essv5668045,essv6391420,essv5630584,essv6391714,essv5659979,essv6392803,essv5497528,essv6393188,essv5400301,essv6198412,essv5399605,essv6394450,essv5681547,essv6096512,essv5485167,essv6120847,essv5476553,essv5791740,essv5662477,essv6174141,essv5404710,essv5934675,essv5662055,essv6404529,essv5414371,essv6406075,essv5586732,essv6477225,essv5713476,essv6189773,essv5440563,essv6268734,essv5650758,essv5808919,essv5411190,essv6183284,essv5596387,essv6416691,essv5495816,essv6417879,essv5557873,essv6196076,essv5660082,essv6508257,essv5665492,essv6276782,essv5450047,essv6125751,essv5572813,essv6420906,essv5630462,essv6420973,essv5601497,essv6270096,essv5745359,essv6427748,essv5694052,essv6137619,essv5704918,essv6558821,essv5635226,essv6138525,essv5438706,essv6265953,essv5477693,essv6146613,essv5544803,essv6440560,essv5467941,essv6144564,essv5502312,essv6137882,essv5594926,essv6444493,essv5595470,essv6444738,essv5735340,essv6263918,essv5406603,essv6234994,essv5635426,essv6144072,essv5679057,essv6189820,essv5484342,essv6021408,essv5415067,essv5937573,essv5610805,essv6451164,essv5453731,essv6287356,essv5695467,essv6291960,essv5507567,essv6202614,essv5530077,essv6486815,essv5505041,essv6189034,essv5427209,essv5826381,essv5422692,essv6090069,essv5580254,essv6266718,essv5462412,essv6110710,essv5760897,essv6563797,essv5714010,essv5836217,essv5592554,essv6166775,essv5733018,essv6493709,essv5554352,essv6556647,essv5441847,essv6300778,essv5484012,essv6465745,essv5699105,essv6303300,essv5732112,essv6072796,essv5631474,essv6022244,essv5612808,essv6244996,essv5624910,essv6235548,essv5753693,essv6479997,essv5559934,essv6000861,essv5407382,essv6178429,essv5752258,essv6309709,essv6587858,essv5968327,essv6594372,essv5892249,essv6592924,essv6200594,essv6594867,essv6142082,essv5858332,essv5813827,essv6106470,essv6318232,essv5861818,essv6109050,essv5844994,essv6045833,essv6086130,essv6320485,essv6040793,essv6080301,essv6492365,essv6094353,essv6217808,essv6323533,essv6072153,essv6471952,essv6066661,essv6224977,essv6096805,essv6330278,essv5797925,essv6020011,essv5839935,essv6334106,essv6501693,essv6335616,essv5937931,essv6285635,essv6006918,essv6236574,essv6139291,essv6342193,essv6111972,essv5966889,essv5930468,essv6344090,essv5894682,essv6021243,essv6481508,essv6348497,essv6481719,essv6075485,essv6549217,essv5885870,essv6245044,essv6482724,essv6246524,essv6190114,essv5899676,essv5963404,essv6360109,essv6363014,essv5843991,essv6505625,essv6067888,essv5793845,essv6171323,essv5997187,essv6192872,essv6108729,essv6107151,essv6369064,essv6137578,essv6011891,essv6263762,essv6574311,essv5853215,essv5971857,essv5914664,essv6372706,essv6374721,essv5934148,essv6237537,essv6518158,essv6375852,essv6023402,essv6375911,essv6021599,essv6273426,essv5790012,essv6094768,essv6123735,essv6564734,essv5908603,essv5849894,essv6166486,essv5795745,essv5905111,essv6125527,essv6080470,essv6543831,essv6053442,essv6383400,essv6385332,essv6387750 M 1151 0 265 "" HG00096,HG00114,HG00119,HG00120,HG00125,HG00137,HG00146,HG00149,HG00182,HG00188,HG00189,HG00233,HG00242,HG00244,HG00253,HG00254,HG00256,HG00265,HG00269,HG00271,HG00273,HG00284,HG00306,HG00308,HG00320,HG00327,HG00339,HG00343,HG00369,HG00372,HG00373,HG00418,HG00427,HG00442,HG00448,HG00475,HG00512,HG00524,HG00537,HG00551,HG00557,HG00565,HG00581,HG00608,HG00614,HG00626,HG00629,HG00635,HG00651,HG00657,HG00662,HG00689,HG00690,HG00692,HG00693,HG00701,HG00705,HG00707,HG00731,HG00732,HG00737,HG01048,HG01066,HG01067,HG01072,HG01073,HG01098,HG01101,HG01112,HG01124,HG01148,HG01149,HG01254,HG01334,HG01342,HG01357,HG01375,HG01389,HG01461,HG01465,HG01489,HG01497,NA07048,NA07051,NA07056,NA11830,NA11892,NA11893,NA11994,NA12003,NA12045,NA12046,NA12286,NA12340,NA12347,NA12383,NA12413,NA12546,NA12718,NA12748,NA12750,NA12775,NA12777,NA12778,NA12827,NA12829,NA12842,NA12889,NA18486,NA18487,NA18499,NA18516,NA18534,NA18538,NA18543,NA18544,NA18549,NA18553,NA18557,NA18564,NA18567,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18606,NA18610,NA18614,NA18616,NA18617,NA18620,NA18624,NA18633,NA18635,NA18638,NA18868,NA18940,NA18949,NA18950,NA18960,NA18963,NA18964,NA18982,NA18988,NA18991,NA18999,NA19004,NA19009,NA19010,NA19062,NA19074,NA19075,NA19077,NA19078,NA19079,NA19083,NA19085,NA19088,NA19102,NA19107,NA19130,NA19189,NA19198,NA19256,NA19313,NA19316,NA19319,NA19327,NA19328,NA19331,NA19350,NA19360,NA19373,NA19374,NA19377,NA19379,NA19380,NA19384,NA19394,NA19397,NA19401,NA19431,NA19434,NA19436,NA19438,NA19439,NA19440,NA19443,NA19445,NA19453,NA19455,NA19461,NA19462,NA19466,NA19470,NA19474,NA19657,NA19658,NA19716,NA19719,NA19722,NA19723,NA19749,NA19774,NA19780,NA19786,NA19819,NA19904,NA19920,NA20127,NA20282,NA20296,NA20332,NA20334,NA20344,NA20348,NA20506,NA20514,NA20516,NA20521,NA20533,NA20535,NA20540,NA20544,NA20581,NA20585,NA20757,NA20760,NA20769,NA20770,NA20771,NA20773,NA20774,NA20783,NA20785,NA20787,NA20790,NA20792,NA20795,NA20797,NA20798,NA20800,NA20801,NA20804,NA20806,NA20807,NA20808,NA20809,NA20810,NA20811,NA20814,NA20815,NA20816,NA20818,NA20819,NA20826,NA20828 esv2487333 1 5869360 5869500 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5391968 M 1 0 1 "" NA18507 esv2737362 1 5869423 5869682 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6874689,essv6877659 M 96 0 2 "" SSM092,SSM093 esv28776 1 5876593 5878094 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16704,esv10860,esv18182 M 40 0 7 "" NA07045,NA12006,NA12489,NA12878,NA18508,NA18523,NA19147 nsv545172 1 5876620 5877286 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708951 M 17421 0 1 "" esv2737473 1 5876982 5877388 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6950533,essv6821161,essv6710564,essv6725838,essv6689249,essv6972307,essv6941765 M 96 0 7 "" SSM023,SSM025,SSM029,SSM036,SSM042,SSM046,SSM079 nsv1076023 1 5877517 5877591 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764025 M 1 0 1 "" KWP1 nsv1145315 1 5877518 5877591 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982408 M 2 0 1 "" KWS1 nsv831203 1 5890090 6027962 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442096,nssv1442107,nssv1442118 M 95 0 3 MIR4689,NPHP4 esv2494780 1 5892204 5892639 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5176671 M 1 1 0 "" NA18507 nsv512712 1 5892315 5892438 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625336 M 1 1 0 "" 1 esv1660216 1 5892367 5892367 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4159802 M 2 1 0 "" HuRef nsv545173 1 5893451 6085353 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708952 M 17421 1 0 KCNAB2,MIR4689,NPHP4 esv2764259 1 5898729 5903958 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004917,essv7004918 M 1109 0 2 "" RW_0235,RW_0272 nsv545174 1 5904718 6031944 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708953 M 17421 0 1 MIR4689,NPHP4 nsv518390 1 5906337 5913621 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695820 M 2026 1 0 "" nsv945754 1 5909049 5910925 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751363,nssv1751427,nssv1751344,nssv1751372,nssv1751360,nssv1751404,nssv1751423,nssv1751395,nssv1751368,nssv1751408,nssv1751367,nssv1751410,nssv1751424,nssv1751415,nssv1751370,nssv1751401,nssv1751352,nssv1751375,nssv1751348,nssv1751390,nssv1751361,nssv1751373,nssv1751345,nssv1751385,nssv1751419,nssv1751364,nssv1751417,nssv1751362,nssv1751422,nssv1751365,nssv1751416,nssv1751398,nssv1751342,nssv1751387,nssv1751354,nssv1751377,nssv1751420,nssv1751384,nssv1751421,nssv1751400,nssv1751355,nssv1751339,nssv1751353,nssv1751380,nssv1751346,nssv1751413,nssv1751349,nssv1751388,nssv1751343,nssv1751405,nssv1751340,nssv1751381,nssv1751341,nssv1751383,nssv1751347,nssv1751409,nssv1751425,nssv1751392,nssv1751357,nssv1751432,nssv1751356,nssv1751431,nssv1751350,nssv1751397,nssv1751418,nssv1751393,nssv1751359,nssv1751366,nssv1751358,nssv1751402,nssv1751351,nssv1751386,nssv1751406,nssv1751435,nssv1751382,nssv1751411,nssv1751412,nssv1751396,nssv1751369,nssv1751433,nssv1751426,nssv1751428,nssv1751378,nssv1751407,nssv1751379,nssv1751371,nssv1751399,nssv1751414,nssv1751374,nssv1751376,nssv1751391,nssv1751430,nssv1751429,nssv1751389,nssv1751394,nssv1751434,nssv1751403 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2737584 1 5925252 5925705 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821162,essv6843743,essv6721990,essv6828990 M 96 0 4 NPHP4 SSM011,SSM045,SSM079,SSM081 esv2737695 1 5925381 5925493 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6843743 M 96 0 1 NPHP4 SSM011 esv2737806 1 5928847 5929509 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6937658,essv6669099 M 96 0 2 NPHP4 SSM005,SSM022 nsv825586 1 5933761 5934633 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423942 M 31 0 1 NPHP4 NA18582 esv3303661 1 5934286 5934287 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7787396,essv7835328,essv7797541,essv7806879,essv7803116,essv7816951,essv7776436,essv7804333,essv7811898,essv7833753,essv7819420,essv7821646,essv7804836,essv7779858,essv7795754,essv7771311,essv7802590,essv7812609,essv7835194,essv7791894,essv7777643,essv7770850,essv7800312,essv7789668,essv7772554,essv7800612,essv7783838,essv7790170,essv7790786,essv7812099,essv7824790,essv7816202,essv7815947,essv7816412,essv7805383,essv7779695,essv7791442,essv7823099,essv7778061,essv7786270 M 185 40 0 NPHP4 NA07000,NA07037,NA10847,NA11881,NA11918,NA11919,NA11992,NA11994,NA11995,NA12006,NA12043,NA12045,NA12144,NA12155,NA12156,NA12249,NA12716,NA12761,NA12812,NA12814,NA12815,NA12878,NA12891,NA12892,NA18499,NA18501,NA18502,NA18511,NA18517,NA18519,NA18523,NA18853,NA18858,NA18907,NA18916,NA19108,NA19114,NA19116,NA19137,NA19190 esv3310166 1 5934290 5934291 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7841130,essv7840521,essv7839898 M 185 3 0 NPHP4 NA12878,NA12891,NA12892 esv3339145 1 5934293 5934303 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898499,essv8898500,essv8898487,essv8898512,essv8898519,essv8898513,essv8898505,essv8898508,essv8898491,essv8898490,essv8898489,essv8898498,essv8898494,essv8898515,essv8898495,essv8898518,essv8898511,essv8898510,essv8898516,essv8898485,essv8898506,essv8898504,essv8898493,essv8898488,essv8898497,essv8898507,essv8898486,essv8898509,essv8898496,essv8898517,essv8898502,essv8898484,essv8898501 M 185 33 0 NPHP4 NA07000,NA07037,NA10847,NA11881,NA11919,NA11992,NA11994,NA11995,NA12006,NA12043,NA12045,NA12144,NA12155,NA12156,NA12249,NA12716,NA12761,NA18499,NA18501,NA18502,NA18511,NA18517,NA18519,NA18523,NA18853,NA18858,NA18907,NA18916,NA19108,NA19114,NA19116,NA19137,NA19190 esv3427069 1 5934298 5934304 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674044,essv8674045,essv8674041 M 185 3 0 NPHP4 NA12878,NA12891,NA12892 esv2737917 1 5944485 5944703 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6902515,essv6946477,essv6950534,essv6692746,essv6776922,essv6839956,essv6910022,essv6679147,essv6718151,essv6846990,essv6853210,essv6892305,essv6913982,essv6871702,essv6766527,essv6668918,essv6789130 M 96 0 17 NPHP4 SSM013,SSM015,SSM016,SSM024,SSM025,SSM031,SSM033,SSM037,SSM044,SSM064,SSM067,SSM070,SSM084,SSM086,SSM087,SSM091,SSM098 esv2763437 1 5948677 6018391 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7030745 M 1109 0 1 NPHP4 SW_1304 nsv831314 1 5949469 6123057 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442129,nssv1442162,nssv1442140,nssv1442151 M 95 0 4 KCNAB2,NPHP4 nsv1008071 1 5952243 6144538 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696763 M 29084 0 1 KCNAB2,NPHP4 nsv743 1 5962129 6007387 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9178 M 9 0 1 NPHP4 NA12156 nsv545175 1 6007446 6053630 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708954 M 17421 0 1 KCNAB2,NPHP4 esv3585100 1 6031428 6041299 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845876,essv9845873,essv9845875,essv9845874 M 2504 0 4 NPHP4 HG00182,HG00306,HG02545,HG02577 dgv9e212 1 6035053 6044155 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577711,esv3577712 M 873 0 19 NPHP4 400106PC,400368SD,400547BS,400620MT,400926LJ,400948EV,400949AM,401259LS,401295HB,401318AV,401354KM,401623SN,401630MK,401646MC,401661HD,401734PG,401899MB,401935TM,401975VD nsv506919 1 6035606 6041606 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623262 M 4 0 0 NPHP4 NA18994 esv3395207 1 6037353 6038029 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652093 M 185 1 0 NPHP4 NA19240 esv33437 1 6037569 6038037 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv95744,essv97100,essv94307,essv94480,essv93021,essv92840,essv101040,essv97813,essv101160,essv99200,essv93510,essv92517,essv100607,essv94798 M 51 14 0 NPHP4 21618,21693,21791,21808,21837,21841,21863,21932,21939,22075,22128,22233,22275,22298 esv3373910 1 6037913 6038098 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808973 M 185 1 0 NPHP4 NA12878 nsv520207 1 6042934 6046264 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697281 M 2026 0 1 NPHP4 nsv953994 1 6053001 6121400 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001623 M 1 0 1 KCNAB2 BILGI_BIOE nsv1008999 1 6056168 6154729 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482459 M 29084 1 0 KCNAB2 esv2470104 1 6064711 6066988 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5382298 M 1 0 1 KCNAB2 NA18507 esv22772 1 6064750 6066933 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17376,esv15196,esv19261 M 40 27 1 KCNAB2 NA06985,NA07037,NA07045,NA11894,NA11993,NA12004,NA12006,NA12156,NA12287,NA12414,NA12749,NA12828,NA12878,NA15510,NA18505,NA18508,NA18511,NA18517,NA18858,NA18861,NA18909,NA18916,NA19099,NA19114,NA19147,NA19190,NA19225,NA19240 esv2738028 1 6064778 6065911 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6906089,essv6821163,essv6846991,essv6843871,essv6686144,essv6853211,essv6816568,essv6954715,essv6721991,essv6863937,essv6972308,essv6898594,essv6668919,essv6733470,essv6941766,essv6961533,essv6789131,essv6738796 M 96 0 18 KCNAB2 SSM014,SSM023,SSM026,SSM027,SSM029,SSM031,SSM035,SSM045,SSM049,SSM052,SSM070,SSM078,SSM079,SSM085,SSM086,SSM087,SSM089,SSM100 esv3567536 1 6065094 6065428 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9766283 M 767 0 1 KCNAB2 dgv65n54 1 6065112 6065814 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545178,nsv545176,nsv545177 M 17421 0 4 KCNAB2 dgv66n54 1 6065112 6066099 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545191,nsv545179,nsv545180 M 17421 3 0 KCNAB2 dgv67n54 1 6065112 6066252 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545182,nsv545181,nsv545183,nsv545193,nsv545192 M 17421 0 6 KCNAB2 nsv545186 1 6065112 6066620 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708970,nssv708971 M 17421 1 1 KCNAB2 dgv68n54 1 6065112 6066636 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545194,nsv545204,nsv545187,nsv545184,nsv545195,nsv545188,nsv545185 M 17421 19 0 KCNAB2 dgv69n54 1 6065272 6065872 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545190,nsv545189 M 17421 2 0 KCNAB2 nsv545196 1 6065272 6067640 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708989,nssv708990 M 17421 0 2 KCNAB2 nsv159264 1 6065293 6065490 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177842 M 24 KCNAB2 dgv70n54 1 6065323 6066636 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545202,nsv545201,nsv545203,nsv545197 M 17421 0 5 KCNAB2 nsv545199 1 6065426 6066047 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708993 M 17421 0 1 KCNAB2 dgv71n54 1 6065426 6066099 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545200,nsv545198 M 17421 2 0 KCNAB2 nsv545205 1 6065639 6066303 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709001 M 17421 1 0 KCNAB2 dgv72n54 1 6065639 6066636 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545207,nsv545208,nsv545211,nsv545209,nsv545206 M 17421 0 6 KCNAB2 nsv545210 1 6065749 6066636 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709008,nssv709007 M 17421 2 0 KCNAB2 esv7234 1 6065791 6066777 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29675 M 1 0 0 KCNAB2 nsv511675 1 6065857 6066800 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626313 M 1 0 1 KCNAB2 1 esv2738139 1 6065880 6066099 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6718787 M 96 0 1 KCNAB2 SSM007 esv2738250 1 6065929 6066616 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6679148,essv6769505,essv6950073,essv6839957,essv6929045,essv6807360,essv6714226,essv6967912,essv6836178,essv6843872,essv6921699,essv6910023,essv6853212,essv6725839,essv6793267,essv6773422,essv6895834,essv6913984,essv6954716,essv6913983,essv6696980,essv6863938,essv6824966,essv6666885,essv6797433,essv6789133,essv6941767,essv6780849 M 96 0 27 KCNAB2 SSM004,SSM015,SSM016,SSM018,SSM020,SSM023,SSM026,SSM028,SSM030,SSM033,SSM038,SSM043,SSM046,SSM065,SSM066,SSM068,SSM070,SSM071,SSM072,SSM075,SSM080,SSM083,SSM084,SSM085,SSM087,SSM089,SSM099 nsv545212 1 6065930 6066466 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709010 M 17421 0 1 KCNAB2 dgv73n54 1 6065986 6066636 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545213,nsv545215,nsv545221,nsv545216,nsv545214,nsv545220,nsv545219 M 17421 73 40 KCNAB2 nsv545217 1 6065986 6067640 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709089,nssv709090 M 17421 2 0 KCNAB2 dgv74n54 1 6065986 6080378 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545218,nsv545223,nsv545227 M 17421 3 0 KCNAB2 nsv545222 1 6066047 6067640 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709127 M 17421 0 1 KCNAB2 nsv545224 1 6066099 6066620 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709129,nssv709130 M 17421 0 2 KCNAB2 nsv511127 1 6066099 6070870 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626143 M 1 0 1 KCNAB2 1 nsv545225 1 6066150 6066636 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709131,nssv709134,nssv709133,nssv709132 M 17421 4 0 KCNAB2 nsv545226 1 6066303 6066620 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709137,nssv709136,nssv709135,nssv709138 M 17421 0 4 KCNAB2 esv2738362 1 6066454 6066621 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972309 M 96 0 1 KCNAB2 SSM029 nsv545228 1 6066466 6066620 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709140 M 17421 0 1 KCNAB2 esv2738473 1 6066728 6066907 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6813156 M 96 0 1 KCNAB2 SSM077 esv2738584 1 6072125 6072956 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933292,essv6776923,essv6885973,essv6846992,essv6668920,essv6703848,essv6972310,essv6733471,essv6784978 M 96 0 9 KCNAB2 SSM021,SSM029,SSM031,SSM040,SSM049,SSM067,SSM069,SSM086,SSM096 esv2668412 1 6072194 6072560 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5563282,essv6188297,essv5520884,essv6237773,essv5695092,essv6544636,essv5865050,essv6335002,essv5877569,essv6255474,essv5588220,essv6501198,essv5528295,essv6129318,essv5886683,essv5636685,essv5922487 M 1151 0 17 KCNAB2 HG00284,HG00328,HG00342,HG00437,HG00543,HG01133,HG01357,HG01390,NA18572,NA18924,NA19374,NA19379,NA19391,NA19428,NA19746,NA19786,NA20314 esv2671721 1 6072195 6072792 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6382629,essv5843395,essv6148521,essv5757120,essv6393423,essv5907730,essv6397243,essv5413546,essv6397638,essv5407413,essv6399264,essv5983105,essv6121818,essv5971083,essv6129056,essv5396217,essv6409198,essv6020623,essv6416025,essv5930850,essv6553754,essv5996087,essv6502693,essv5746389,essv6514803,essv5679535,essv6155134,essv5842204,essv6427608,essv5467304,essv6429236,essv5636110,essv6594356,essv5474452,essv6429959,essv5454081,essv6497354,essv5513983,essv6433245,essv5512966,essv6437441,essv5674310,essv6439716,essv5432446,essv6442096,essv5402741,essv6165749,essv5753506,essv6165747,essv5506435,essv6259723,essv5871453,essv6128759,essv5740671,essv6447871,essv5829542,essv6448961,essv5645205,essv6573525,essv5788966,essv6490716,essv5997402,essv6452048,essv5788028,essv6282855,essv5613898,essv6139989,essv5416587,essv6227383,essv5932588,essv6548910,essv5569094,essv6556052,essv5946793,essv6532235,essv5616878,essv6498118,essv5415000,essv6297003,essv5958284,essv6229880,essv5621908,essv6297659,essv5545770,essv6139787,essv5406403,essv6298507,essv5605963,essv6541060,essv5655454,essv6146458,essv5909976,essv6204063,essv5836894,essv6464469,essv6020546,essv6138404,essv5552528,essv6567015,essv5909974,essv6304897,essv5611477,essv6062214,essv5943253,essv6187079,essv5767011,essv6068361,essv5881206,essv6141669,essv5637574,essv6493493,essv5407886,essv6580197,essv5632013,essv6094817,essv6008020,essv6086953,essv5764384,essv6513052,essv5978133,essv6540799,essv5884490,essv6265889,essv5864460,essv6585620,essv5617548,essv6269635,essv5941011,essv6114052,essv6040350,essv6055531,essv5575680,essv6588591,essv5531345,essv6255955,essv5880362,essv6113253,essv5424572,essv6073435,essv5889228,essv6480699,essv5633336,essv6248870,essv5558169,essv6107623,essv5800765,essv6261806,essv5669584,essv6473009,essv5645214,essv6168202,essv5928633,essv6465287,essv5730880,essv6586272,essv5665100,essv6334902,essv5415051,essv6200679,essv5475755,essv6336381,essv5469579,essv6505577,essv5995311,essv6103095,essv5707787,essv6088037,essv5489757,essv6261835,essv5714136,essv6119926,essv5587867,essv6080909,essv5459906,essv6482164,essv5617025,essv6072292,essv5691431,essv6345185,essv5425976,essv6164111,essv5837146,essv6349389,essv5714321,essv6118327,essv5657029,essv6142865,essv5673767,essv6492760,essv5742080,essv6508076,essv5460614,essv6501200,essv5402443,essv6491505,essv5677246,essv6216628,essv5774618,essv6210340,essv5428863,essv6060604,essv5724721,essv6057781,essv5845916,essv6148472,essv5509769,essv6361399,essv5497657,essv6592445,essv5918927,essv6195668,essv5705359,essv6103012,essv5998533,essv6282381,essv5453827,essv6192880,essv5883448,essv6157504,essv5965967,essv6169655,essv5445107,essv6371370,essv5752732,essv6223880,essv5474868,essv6372612,essv5845242,essv6072530,essv6376345,essv6081217,essv6376855,essv6377173,essv6061149,essv6126277,essv6106545,essv6217674,essv6112224,essv6206244,essv6529368,essv6380438,essv6506890,essv6223863,essv6551773 M 1151 0 244 KCNAB2 HG00108,HG00111,HG00123,HG00124,HG00125,HG00131,HG00136,HG00137,HG00138,HG00139,HG00140,HG00142,HG00154,HG00232,HG00236,HG00237,HG00246,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00260,HG00261,HG00271,HG00272,HG00273,HG00274,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00309,HG00310,HG00313,HG00315,HG00318,HG00319,HG00320,HG00323,HG00324,HG00325,HG00326,HG00327,HG00328,HG00330,HG00334,HG00335,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00345,HG00346,HG00375,HG00418,HG00427,HG00428,HG00436,HG00437,HG00443,HG00449,HG00463,HG00464,HG00473,HG00479,HG00500,HG00501,HG00512,HG00513,HG00525,HG00533,HG00534,HG00537,HG00543,HG00557,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00607,HG00608,HG00613,HG00614,HG00619,HG00620,HG00650,HG00651,HG00654,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00707,HG00708,HG00740,HG01048,HG01051,HG01052,HG01055,HG01060,HG01066,HG01067,HG01070,HG01072,HG01073,HG01079,HG01080,HG01082,HG01083,HG01102,HG01108,HG01113,HG01170,HG01171,HG01173,HG01174,HG01188,HG01334,HG01350,HG01351,HG01353,HG01354,HG01359,HG01365,HG01366,HG01377,HG01383,HG01390,HG01437,HG01488,HG01518,NA11831,NA12154,NA12249,NA18530,NA18534,NA18543,NA18549,NA18557,NA18559,NA18602,NA18606,NA18609,NA18613,NA18620,NA18621,NA18623,NA18632,NA18636,NA18638,NA19190,NA19197,NA19223,NA19324,NA19376,NA19379,NA19383,NA19385,NA19394,NA19401,NA19404,NA19428,NA19436,NA19452,NA19457,NA19463,NA19648,NA19651,NA19652,NA19654,NA19655,NA19657,NA19660,NA19661,NA19663,NA19664,NA19675,NA19676,NA19678,NA19679,NA19681,NA19682,NA19684,NA19685,NA19712,NA19716,NA19717,NA19719,NA19720,NA19723,NA19725,NA19726,NA19728,NA19729,NA19731,NA19732,NA19746,NA19749,NA19750,NA19755,NA19756,NA19758,NA19759,NA19762,NA19770,NA19773,NA19774,NA19776,NA19779,NA19780,NA19782,NA19785,NA19788,NA19789,NA19818,NA19920,NA20126,NA20296,NA20322,NA20356 esv2738695 1 6072233 6072569 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6703848,essv6784978 M 96 0 2 KCNAB2 SSM040,SSM069 esv2738806 1 6072373 6072632 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933292,essv6846992,essv6776923,essv6885973,essv6668920,essv6972310 M 96 0 6 KCNAB2 SSM021,SSM029,SSM031,SSM067,SSM086,SSM096 dgv27n106 1 6081500 6082800 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1115333,nsv1132278 M 2 2 0 KCNAB2 KWS1,KWS2 esv2738917 1 6085713 6086177 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6839958,essv6910024,essv6804391 M 96 0 3 KCNAB2 SSM015,SSM074,SSM084 nsv1122288 1 6085900 6085985 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969739 M 2 0 1 KCNAB2 KWS2 nsv1126971 1 6090528 6090587 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985259 M 2 0 1 KCNAB2 KWS1 esv2739028 1 6103291 6103397 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6699586 M 96 0 1 KCNAB2 SSM039 nsv461283 1 6108377 6184092 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537694 M 1557 0 1 CHD5,KCNAB2 HGDP00491 nsv545229 1 6108377 6184092 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173650 M 17421 0 1 CHD5,KCNAB2 HGDP00491 dgv75n54 1 6141325 6204266 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545230,nsv545231 M 17421 0 2 CHD5,KCNAB2 nsv470689 1 6149122 6233573 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547694,nssv547692,nssv547691,nssv547693 M 443 0 4 CHD5,KCNAB2 HGDP00288,HGDP00323,HGDP00657,HGDP01397 nsv825697 1 6161760 6162540 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431963 M 31 1 0 CHD5 NA18972 nsv545232 1 6164408 6168422 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709143 M 17421 1 0 CHD5 esv21998 1 6166718 6169303 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17786 M 40 1 0 CHD5 NA06985 dgv76n54 1 6167121 6169030 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545234,nsv545233 M 17421 5 0 CHD5 esv2739139 1 6167296 6167468 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6813157,essv6821164,essv6853213,essv6721992,essv6941768 M 96 0 5 CHD5 SSM023,SSM045,SSM077,SSM079,SSM087 esv2676924 1 6167709 6168580 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5397445 M 1151 0 1 CHD5 HG00476 nsv545235 1 6167909 6169095 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709149 M 17421 0 1 CHD5 nsv831425 1 6189351 6324478 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442196,nssv1442173,nssv1442185 M 95 0 3 ACOT7,CHD5,GPR153,HES3,ICMT,LINC00337,RNF207,RPL22 nsv818555 1 6190215 6212870 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417552 M 112 0 1 CHD5 NA18971 nsv854 1 6191265 6236143 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7151 M 9 0 1 CHD5 NA12156 esv3383496 1 6209065 6210363 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692396 M 185 1 0 CHD5 NA19239 nsv1149305 1 6209599 6211000 CNV duplication John_et_al_2014 26484159 Sequencing nssv4002812 M 1 1 0 CHD5 KWB1 esv2739250 1 6214958 6215186 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6748154 M 96 0 1 CHD5 SSM008 esv2739361 1 6214972 6215433 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6699588,essv6846993,essv6679149 M 96 0 3 CHD5 SSM033,SSM039,SSM086 esv2739473 1 6219836 6220595 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6877660,essv6813158,essv6937659,essv6699589,essv6747762,essv6950535,essv6742123,essv6776924,essv6714227,essv6885974,essv6784465,essv6967913,essv6718798,essv6832585,essv6910025,essv6921700,essv6773423,essv6954717,essv6859169,essv6913986,essv6892306,essv6761844,essv6797434,essv6695565,essv6789134,essv6863939,essv6750583,essv6733472,essv6679150,essv6972311,essv6874690,essv6925674,essv6801607,essv6961534,essv6780850,essv6738797,essv6917409 M 96 0 37 CHD5 SSM006,SSM007,SSM009,SSM015,SSM016,SSM017,SSM018,SSM019,SSM022,SSM025,SSM026,SSM027,SSM028,SSM029,SSM033,SSM039,SSM043,SSM049,SSM052,SSM053,SSM056,SSM057,SSM062,SSM066,SSM067,SSM068,SSM070,SSM072,SSM073,SSM077,SSM082,SSM088,SSM089,SSM092,SSM093,SSM096,SSM098 esv2739584 1 6220198 6220504 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6950535,essv6813158,essv6937659,essv6699589,essv6776924,essv6967913,essv6714227,essv6885974,essv6859169,essv6718798,essv6832585,essv6877660,essv6910025,essv6892306,essv6773423,essv6913986,essv6761844,essv6954717,essv6797434,essv6695565,essv6874690,essv6972311,essv6863939,essv6789134,essv6750583,essv6925674,essv6961534,essv6780850,essv6801607 M 96 0 29 CHD5 SSM006,SSM007,SSM015,SSM016,SSM019,SSM022,SSM025,SSM026,SSM027,SSM028,SSM029,SSM039,SSM043,SSM057,SSM062,SSM066,SSM067,SSM068,SSM070,SSM072,SSM073,SSM077,SSM082,SSM088,SSM089,SSM092,SSM093,SSM096,SSM098 nsv545236 1 6221975 6322936 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709150 M 17421 0 1 CHD5,GPR153,HES3,ICMT,LINC00337,RNF207,RPL22 nsv1148543 1 6234199 6236100 CNV duplication John_et_al_2014 26484159 Sequencing nssv4000580 M 1 1 0 CHD5 KWB1 nsv1115334 1 6234300 6235600 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976386 M 2 1 0 CHD5 KWS2 nsv1076981 1 6239499 6240300 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766151 M 1 0 1 CHD5 KWP1 nsv1143431 1 6239500 6240700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980629 M 2 0 1 CHD5 KWS1 nsv945755 1 6245981 6247890 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750828,nssv1750834,nssv1750827,nssv1750800,nssv1751438,nssv1750838,nssv1751448,nssv1751468,nssv1750820,nssv1750799,nssv1751464,nssv1750839,nssv1750823,nssv1750784,nssv1750824,nssv1751470,nssv1751458,nssv1751436,nssv1750826,nssv1751475,nssv1751457,nssv1751471,nssv1751449,nssv1750785,nssv1751441,nssv1750793,nssv1751454,nssv1750837,nssv1751460,nssv1751472,nssv1750825,nssv1750835,nssv1751442,nssv1750804,nssv1751467,nssv1750791,nssv1750822,nssv1750786,nssv1750821,nssv1750795,nssv1751443,nssv1750816,nssv1751452,nssv1750811,nssv1751465,nssv1750833,nssv1751440,nssv1751462,nssv1750829,nssv1750802,nssv1751451,nssv1750798,nssv1751447,nssv1751469,nssv1751450,nssv1750807,nssv1751444,nssv1751459,nssv1751437,nssv1750794,nssv1751445,nssv1750830,nssv1751446,nssv1750812,nssv1751453,nssv1751461,nssv1751439,nssv1750787,nssv1751455,nssv1750836,nssv1751456,nssv1750796,nssv1750788,nssv1750803,nssv1750789,nssv1751474,nssv1750819,nssv1750815,nssv1750792,nssv1750808,nssv1750818,nssv1751473,nssv1750814,nssv1750809,nssv1750805,nssv1750813,nssv1750783,nssv1750790,nssv1750797,nssv1750806,nssv1750831,nssv1751463,nssv1750810,nssv1750801,nssv1750817,nssv1750832,nssv1751466 M 97 10 0 RPL22 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv954005 1 6263401 6271800 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001634 M 1 0 1 RNF207 BILGI_BIOE nsv1126172 1 6268600 6269600 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984401 M 2 0 1 RNF207 KWS1 dgv8n67 1 6280681 6324363 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825919,nsv825808 M 31 2 0 ACOT7,GPR153,HES3,ICMT,LINC00337,RNF207 AK6,NA18969 nsv508825 1 6281335 6346609 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623771 M 4 1 0 ACOT7,GPR153,HES3,ICMT,LINC00337,RNF207 NA18994 nsv1119659 1 6288854 6288923 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982104 M 2 0 1 ICMT KWS1 nsv1119660 1 6288947 6289010 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982105 M 2 0 1 ICMT KWS1 nsv1076987 1 6295699 6296200 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3770360 M 1 0 1 ICMT KWP1 dgv28n106 1 6295700 6296400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1130943,nsv1118096 M 2 0 2 ICMT,LINC00337 KWS1,KWS2 nsv545237 1 6301050 6310236 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709151 M 17421 0 1 GPR153,HES3 nsv1126173 1 6302200 6303000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984402 M 2 0 1 "" KWS1 nsv526371 1 6307255 6367219 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702667 M 2026 0 1 ACOT7,GPR153 nsv545238 1 6308570 6317983 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709152 M 17421 0 1 GPR153 nsv965 1 6313180 6357882 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7223 M 9 0 1 ACOT7,GPR153 NA12156 nsv1076029 1 6320999 6321300 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766005 M 1 0 1 GPR153 KWP1 nsv519253 1 6322936 6330015 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696748 M 2026 0 1 ACOT7 nsv545239 1 6322936 6349875 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709153 M 17421 0 1 ACOT7 esv2739695 1 6325177 6325517 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6793268,essv6937660 M 96 0 2 ACOT7 SSM022,SSM071 esv2739806 1 6325323 6325452 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6937660 M 96 0 1 ACOT7 SSM022 esv2678878 1 6360584 6360699 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6522014,essv5912815,essv6502128,essv6021622,essv6406490,essv5713936,essv6425276,essv5573056,essv6430960,essv5774476,essv6433661,essv5953943,essv6440921,essv6126119,essv6501160,essv6274070,essv6476379,essv5646124,essv6301497,essv5770630,essv6320069,essv6075688,essv6517152,essv6252739,essv6490833,essv6106893,essv6331114,essv5829830,essv6349142,essv5566219,essv6353190,essv5960431,essv6356107,essv5933190,essv6580549,essv5832694,essv6068092,essv5740501,essv6134833,essv5929484,essv5881636,essv6055933,essv6061635,essv5603474,essv5616662,essv5889294,essv5629280,essv5874369,essv6251253,essv5655032,essv6002646,essv6209670,essv5590205,essv5581840,essv6206653,essv5445152 M 1151 0 56 ACOT7 HG00143,HG00146,HG00250,HG00421,HG00436,HG00513,HG00689,HG00692,HG01354,HG01521,NA07051,NA07346,NA11830,NA12058,NA12154,NA12400,NA18486,NA18520,NA18565,NA18570,NA18599,NA18615,NA18873,NA18963,NA18984,NA18986,NA18987,NA18988,NA19004,NA19007,NA19055,NA19057,NA19064,NA19065,NA19067,NA19213,NA19350,NA19439,NA19676,NA19707,NA19780,NA19788,NA19819,NA19834,NA19835,NA19916,NA19920,NA19982,NA20524,NA20533,NA20539,NA20752,NA20757,NA20769,NA20783,NA20787 esv3585102 1 6362136 6367625 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845893,essv9845892 M 2504 0 2 ACOT7 HG03895,HG04107 esv24092 1 6366319 6368893 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18277 M 40 0 1 ACOT7 NA19240 nsv522013 1 6367219 6456472 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694782 M 2026 0 1 ACOT7 esv2739917 1 6367699 6368264 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6967914,essv6950084,essv6859170,essv6801608,essv6780851,essv6917410 M 96 0 6 ACOT7 SSM004,SSM017,SSM028,SSM068,SSM073,SSM088 esv2740028 1 6367870 6367923 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6859170 M 96 0 1 ACOT7 SSM088 nsv521525 1 6379607 6387784 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698142 M 2026 0 1 ACOT7 nsv1076 1 6385350 6429582 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2226 M 9 0 1 ACOT7 NA18555 nsv477455 1 6402353 6402353 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013155 M 9 1 0 ACOT7 NA18517 nsv1009548 1 6403036 6577412 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696764 M 29084 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 nsv523989 1 6411214 6456472 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699845 M 2026 0 1 ACOT7 nsv545240 1 6411214 6572175 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709154 M 17421 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 nsv1119661 1 6413448 6413523 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982106 M 2 0 1 ACOT7 KWS1 nsv1113068 1 6431604 6431671 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967959 M 2 0 1 ACOT7 KWS2 dgv11e199 1 6434463 6445353 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2665730,esv2673327 M 1151 0 8 ACOT7 HG00138,HG00159,HG00246,HG00325,HG00684,HG01140,NA12342,NA20504 esv3585104 1 6434482 6445321 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845910,essv9845901,essv9845900,essv9845897,essv9845896,essv9845899,essv9845898,essv9845909,essv9845904,essv9845903,essv9845902,essv9845905,essv9845908,essv9845907,essv9845906,essv9845912,essv9845917,essv9845911,essv9845916,essv9845913,essv9845915,essv9845914 M 2504 0 22 ACOT7 HG00096,HG00138,HG00325,HG00345,HG00371,HG00684,HG01140,HG01344,HG01509,HG02681,HG03007,HG03625,HG03731,HG03864,HG03922,NA12044,NA12046,NA12760,NA18558,NA19914,NA20504,NA20870 esv3585105 1 6436514 6438135 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845918 M 2504 0 1 ACOT7 HG02666 nsv545241 1 6437542 6445368 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709155 M 17421 0 1 ACOT7 esv3539789 1 6437890 6446000 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9738536 M 767 0 1 ACOT7 esv3585106 1 6438160 6445897 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845929,essv9845928,essv9845927,essv9845926,essv9845920,essv9845925,essv9845919,essv9845921,essv9845924,essv9845923,essv9845922,essv9845933,essv9845942,essv9845932,essv9845931,essv9845930,essv9845941,essv9845936,essv9845935,essv9845934,essv9845940,essv9845937,essv9845939,essv9845938,essv9845944,essv9845943,essv9845948,essv9845945,essv9845947,essv9845946 M 2504 0 30 ACOT7 HG00096,HG00126,HG00138,HG00159,HG00176,HG00246,HG00325,HG00345,HG00371,HG01140,HG01344,HG01509,HG01516,HG02660,HG02681,HG03007,HG03625,HG03731,HG03864,HG03922,HG03967,NA12044,NA12046,NA12342,NA12760,NA12872,NA18558,NA19914,NA20504,NA20870 esv2678076 1 6438169 6445895 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6270116,essv5621209,essv6323711,essv6180877,essv6038179,essv5499015,essv5579207,essv5574356,essv6110969,essv5746308,essv5712074,essv5814488,essv6083095 M 1151 0 13 ACOT7 HG00138,HG00159,HG00176,HG00246,HG00325,HG00345,HG01140,NA12044,NA12046,NA12342,NA18558,NA19914,NA20504 esv21684 1 6438194 6445835 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12785 M 40 0 1 ACOT7 NA12044 dgv77n54 1 6439368 6445806 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545248,nsv545247,nsv545242,nsv545250,nsv545249,nsv545244,nsv545246,nsv545243,nsv545245 M 17421 0 39 ACOT7 dgv78n54 1 6441893 6445806 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545252,nsv545251 M 17421 0 5 ACOT7 dgv79n54 1 6444278 6445752 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545253,nsv545256,nsv545255,nsv545254 M 17421 0 5 ACOT7 nsv545257 1 6444967 6445806 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709205 M 17421 0 1 ACOT7 nsv1118097 1 6453000 6454100 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980316 M 2 0 1 ACOT7 KWS1 dgv2n27 1 6456472 6572175 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv461616,nsv461839,nsv461950,nsv461728 M 1557 0 4 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 1780862021_A,HGDP00814,NINDS_66,NINDS_98 dgv80n54 1 6456472 6572175 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545260,nsv545259,nsv545263,nsv545261,nsv545262,nsv545258 M 17421 0 8 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 1780862021_A,HGDP00814,NINDS_66,NINDS_98 esv3585107 1 6458634 6459611 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9845959,essv9845992,essv9845958,essv9845949,essv9845952,essv9845957,essv9845951,essv9845950,essv9845953,essv9845956,essv9845955,essv9845954,essv9845960,essv9845965,essv9845991,essv9845974,essv9845961,essv9845964,essv9845963,essv9845962,essv9845968,essv9845973,essv9845967,essv9845966,essv9845969,essv9845972,essv9845971,essv9845970,essv9845981,essv9845976,essv9845975,essv9845990,essv9845977,essv9845980,essv9845979,essv9845978,essv9845984,essv9845989,essv9845983,essv9845982,essv9845985,essv9845988,essv9845987,essv9845986,essv9845997,essv9846023,essv9846006,essv9845993,essv9845996,essv9845995,essv9845994,essv9846005,essv9846000,essv9845999,essv9845998,essv9846004,essv9846001,essv9846003,essv9846002,essv9846013,essv9846008,essv9846022,essv9846007,essv9846012,essv9846009,essv9846011,essv9846010,essv9846016,essv9846021,essv9846015,essv9846014,essv9846020,essv9846017,essv9846019,essv9846018,essv9846029,essv9846025,essv9846028,essv9846024,essv9846027,essv9846026 M 2504 0 81 "" HG00743,HG01312,HG01896,HG01986,HG01989,HG02052,HG02053,HG02143,HG02317,HG02334,HG02419,HG02445,HG02449,HG02464,HG02502,HG02508,HG02557,HG02582,HG02583,HG02629,HG02678,HG02757,HG02768,HG02879,HG02887,HG02944,HG02981,HG03046,HG03048,HG03057,HG03058,HG03111,HG03198,HG03212,HG03258,HG03351,HG03352,HG03470,HG03479,HG03515,HG03517,HG03559,HG03572,NA18489,NA18498,NA18505,NA18517,NA18523,NA18853,NA19024,NA19036,NA19042,NA19095,NA19107,NA19113,NA19131,NA19137,NA19200,NA19210,NA19214,NA19239,NA19247,NA19319,NA19320,NA19328,NA19331,NA19332,NA19334,NA19351,NA19384,NA19428,NA19449,NA19461,NA19466,NA19472,NA19475,NA19664,NA19818,NA20276,NA20348,NA20362 esv2678507 1 6458636 6459610 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6395166,essv5761716,essv5461566,essv5547221,essv5695343,essv5518920,essv5544144,essv6014139 M 1151 0 8 "" NA18489,NA18853,NA19247,NA19331,NA19332,NA19428,NA19472,NA19664 esv29840 1 6458853 6459551 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11459 M 40 0 2 "" NA18517,NA18523 nsv508836 1 6466956 6561089 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619766 M 4 1 0 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 NA10860 nsv954048 1 6474301 6560800 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001645 M 1 0 1 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 BILGI_BIOE esv25412 1 6476628 6521516 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14500 M 40 1 2 ESPN,HES2,MIR4252,TNFRSF25 NA12489,NA18916,NA19147 nsv7880 1 6478028 6671974 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv11789,nssv24605,nssv21438 M 31 1 2 ESPN,HES2,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 NA18517,NA18564,NA19173 nsv1142745 1 6484800 6485200 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3994244 M 2 0 1 ESPN KWS1 nsv482179 1 6484848 6521003 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558540 M 1 1 0 ESPN,MIR4252 KB1 nsv831536 1 6489386 6665403 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442340,nssv1442207,nssv1442351,nssv1442240,nssv1442296,nssv1442307,nssv1442373,nssv1442284,nssv1442273,nssv1442329,nssv1442229,nssv1442262,nssv1442362,nssv1442218,nssv1442251,nssv1442318 M 95 0 16 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 dgv9n67 1 6489926 6524490 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv826030,nsv826142 M 31 2 0 ESPN,MIR4252,TNFRSF25 NA18564,NA18969 nsv470690 1 6494399 6572175 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547695 M 443 1 0 ESPN,PLEKHG5,TNFRSF25 HGDP00553 nsv545264 1 6517179 6552499 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709210 M 17421 0 1 ESPN,PLEKHG5,TNFRSF25 nsv470691 1 6520311 6577765 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547696 M 443 0 1 ESPN,PLEKHG5,TNFRSF25 HGDP00978 nsv462061 1 6523430 6580896 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538332 M 1557 0 1 PLEKHG5,TNFRSF25 HGDP00614 nsv545265 1 6523430 6580896 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173655 M 17421 0 1 PLEKHG5,TNFRSF25 HGDP00614 nsv545266 1 6524501 6530435 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709211 M 17421 0 1 PLEKHG5,TNFRSF25 nsv545267 1 6526324 6564156 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709212 M 17421 0 1 PLEKHG5 nsv1187 1 6547844 6567465 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3152 M 9 1 0 PLEKHG5 NA12878 nsv545268 1 6550376 6638064 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709213 M 17421 0 1 NOL9,PLEKHG5,TAS1R1 nsv473388 1 6559179 6559179 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011403 M 9 1 0 PLEKHG5 NA19129 esv3540122 1 6577131 6577191 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9738869 M 767 0 1 PLEKHG5 nsv1119662 1 6578137 6578206 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982107 M 2 0 1 PLEKHG5 KWS1 nsv831647 1 6585869 6647590 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442540,nssv1442407,nssv1442473,nssv1442418,nssv1442495,nssv1442384,nssv1442529,nssv1442440,nssv1442451,nssv1442462,nssv1442429,nssv1442395,nssv1442506,nssv1442484,nssv1442518 M 95 0 15 NOL9,TAS1R1,ZBTB48 nsv545269 1 6606608 6690140 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709214 M 17421 0 1 KLHL21,NOL9,PHF13,TAS1R1,THAP3,ZBTB48 esv1249079 1 6618972 6618972 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4064753 M 2 1 0 TAS1R1 HuRef nsv1078292 1 6619141 6619828 OTHER inversion Thareja_et_al_2015 25765185 Sequencing nssv3771851 M 1 0 0 TAS1R1 KWP1 esv3302807 1 6620539 6630319 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7734013,essv7736227,essv7733376 M 185 0 0 TAS1R1 NA18517,NA18871,NA18945 esv3585108 1 6621091 6626994 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846032,essv9846031,essv9846030,essv9846033 M 2504 0 4 TAS1R1 HG03873,HG03953,HG03998,NA21106 nsv476608 1 6637146 6637146 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012014 M 9 1 0 TAS1R1 NA12878 nsv955151 1 6642301 6658200 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001656 M 1 0 1 KLHL21,ZBTB48 BILGI_BIOE nsv472111 1 6648560 6648560 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011064 M 9 1 0 ZBTB48 NA18555 nsv826253 1 6660245 6688703 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426369 M 31 1 0 KLHL21,PHF13,THAP3 AK6 nsv1113069 1 6666934 6667007 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967960 M 2 0 1 "" KWS2 nsv1133801 1 6670109 6670167 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969371 M 2 0 1 "" KWS2 dgv29n106 1 6673000 6675900 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1126174,nsv1121745 M 2 0 2 PHF13 KWS1,KWS2 nsv955152 1 6673601 6675200 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001667 M 1 0 1 PHF13 BILGI_BIOE nsv1076992 1 6674399 6675200 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767120 M 1 0 1 PHF13 KWP1 nsv437199 1 6702151 6803747 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467080 M 60 0 1 DNAJC11,LOC100505887 NA19205 nsv1004598 1 6705356 7238663 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3470065 M 29084 1 0 CAMTA1,DNAJC11,LOC100505887 esv3585109 1 6724320 6725187 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846034 M 2504 0 1 DNAJC11 HG01672 nsv945756 1 6726198 6727108 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750849,nssv1750898,nssv1750924,nssv1750893,nssv1750861,nssv1750915,nssv1750842,nssv1750911,nssv1750855,nssv1750903,nssv1750854,nssv1750910,nssv1750922,nssv1750896,nssv1750853,nssv1750914,nssv1750862,nssv1750840,nssv1750847,nssv1750907,nssv1750845,nssv1750902,nssv1750925,nssv1750865,nssv1750846,nssv1750906,nssv1750923,nssv1750878,nssv1750920,nssv1750882,nssv1750871,nssv1750880,nssv1750917,nssv1750936,nssv1750864,nssv1750873,nssv1750859,nssv1750929,nssv1750850,nssv1750879,nssv1750852,nssv1750877,nssv1750921,nssv1750887,nssv1750856,nssv1750875,nssv1750844,nssv1750894,nssv1750868,nssv1750901,nssv1750926,nssv1750934,nssv1750848,nssv1750881,nssv1750919,nssv1750863,nssv1750858,nssv1750897,nssv1750860,nssv1750905,nssv1750857,nssv1750932,nssv1750851,nssv1750883,nssv1750843,nssv1750899,nssv1750841,nssv1750892,nssv1750869,nssv1750866,nssv1750918,nssv1750890,nssv1750867,nssv1750927,nssv1750930,nssv1750891,nssv1750935,nssv1750931,nssv1750908,nssv1750913,nssv1750904,nssv1750900,nssv1750909,nssv1750889,nssv1750876,nssv1750888,nssv1750912,nssv1750870,nssv1750872,nssv1750886,nssv1750916,nssv1750874,nssv1750895,nssv1750928,nssv1750933,nssv1750885,nssv1750884 M 97 10 0 DNAJC11 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2640779 1 6728607 6729873 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5234545 M 1 0 1 DNAJC11 NA18507 esv2237641 1 6729218 6729787 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4834781 M 1 0 1 DNAJC11 NA18507 nsv1298 1 6738208 6758452 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4861 M 9 1 0 DNAJC11 NA19129 nsv1137722 1 6749849 6749916 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990229 M 2 0 1 DNAJC11 KWS2 nsv525013 1 6756434 6761261 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701050 M 2026 0 1 DNAJC11 nsv1130944 1 6761700 6763700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967641 M 2 0 1 DNAJC11 KWS2 esv2660484 1 6762325 6763729 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6494991 M 1151 0 1 "" NA19916 esv28409 1 6762626 6763496 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18257 M 40 0 1 "" NA18909 nsv1126972 1 6777837 6777891 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985260 M 2 0 1 "" KWS1 esv28362 1 6787516 6793395 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14015 M 40 1 0 LOC100505887 NA19225 esv2658131 1 6791743 6793120 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6536392,essv6579898 M 1151 0 2 "" NA19373,NA19393 esv3585111 1 6796042 6803582 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846043 M 2504 1 0 "" HG01776 nsv512713 1 6802507 6802802 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625337 M 1 1 0 "" 1 esv1464790 1 6802621 6802621 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3709090 M 2 1 0 "" HuRef nsv1076034 1 6845399 6846100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3768037 M 1 0 1 CAMTA1 KWP1 esv1979443 1 6858542 6858971 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4873252 M 1 0 1 CAMTA1 NA18507 esv2740139 1 6858553 6858864 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6902516,essv6946478,essv6813159,essv6821165,essv6718152,essv6800487,essv6689250,essv6807361,essv6714228,essv6710566,essv6836179,essv6880412,essv6797435,essv6910026,essv6916551,essv6793269,essv6853214,essv6954719,essv6921701,essv6895835,essv6871703,essv6804392,essv6766528,essv6863940,essv6972312,essv6721993,essv6703849,essv6925675,essv6784979,essv6707251,essv6780852,essv6801609 M 96 0 32 CAMTA1 SSM002,SSM003,SSM013,SSM015,SSM018,SSM019,SSM024,SSM026,SSM029,SSM036,SSM040,SSM041,SSM042,SSM043,SSM044,SSM045,SSM064,SSM068,SSM069,SSM071,SSM072,SSM073,SSM074,SSM075,SSM077,SSM079,SSM083,SSM087,SSM089,SSM091,SSM094,SSM099 esv3540344 1 6858622 6858843 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9739091 M 767 0 1 CAMTA1 nsv955443 1 6858651 6858820 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000445 M 1 0 1 CAMTA1 BILGI_BIOE esv1086035 1 6858652 6858831 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3780745 M 2 0 1 CAMTA1 HuRef esv999225 1 6858656 6858832 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581910 M 3 0 1 CAMTA1 HuRef esv3585114 1 6861163 6861821 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846131,essv9846130 M 2504 0 2 CAMTA1 NA18909,NA19916 esv25521 1 6861345 6861918 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20468 M 40 0 1 CAMTA1 NA18909 esv2740250 1 6977037 6977502 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6929046 M 96 0 1 CAMTA1 SSM020 dgv30n106 1 6997498 6997650 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1121439,nsv1124182 M 2 0 2 CAMTA1 KWS1,KWS2 nsv1075090 1 6997505 6997670 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771983 M 1 0 1 CAMTA1 KWP1 nsv1147277 1 6997514 6997627 CNV deletion John_et_al_2014 26484159 Sequencing nssv4000050 M 1 0 1 CAMTA1 KWB1 nsv1075512 1 6997786 6997855 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771408 M 1 0 1 CAMTA1 KWP1 esv2556451 1 7000416 7001246 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5345164 M 1 1 0 CAMTA1 NA18507 esv3351162 1 7000820 7001039 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652095 M 185 1 0 CAMTA1 NA19240 nsv512714 1 7000943 7000999 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625338 M 1 1 0 CAMTA1 1 esv1590628 1 7000995 7000995 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4106152 M 2 1 0 CAMTA1 HuRef dgv81n54 1 7014444 7024222 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545271,nsv545270,nsv545272 M 17421 3 0 CAMTA1 nsv545273 1 7016109 7023241 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709218 M 17421 0 1 CAMTA1 dgv82n54 1 7020627 7023494 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545274,nsv545275,nsv545276 M 17421 0 3 CAMTA1 nsv1075096 1 7021599 7023700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3768873 M 1 0 1 CAMTA1 KWP1 esv28688 1 7022668 7023529 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12322 M 40 0 2 CAMTA1 NA12489,NA18517 dgv83n54 1 7022699 7023292 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545279,nsv545278,nsv545284,nsv545285 M 17421 0 21 CAMTA1 dgv84n54 1 7022699 7023331 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545286,nsv545277 M 17421 2 0 CAMTA1 dgv85n54 1 7022699 7023494 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545288,nsv545282,nsv545280,nsv545281,nsv545290 M 17421 145 45 CAMTA1 nsv545283 1 7022699 7024222 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709433,nssv709432,nssv709431,nssv709430,nssv709429,nssv709428,nssv709427,nssv709426 M 17421 4 4 CAMTA1 dgv86n54 1 7022750 7023438 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545292,nsv545294,nsv545287 M 17421 0 9 CAMTA1 nsv545289 1 7022750 7024222 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709443,nssv709444 M 17421 0 2 CAMTA1 dgv87n54 1 7022774 7023494 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545291,nsv545295,nsv545293 M 17421 3 0 CAMTA1 nsv545296 1 7023187 7023292 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709457 M 17421 0 1 CAMTA1 nsv545297 1 7023187 7023438 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709459,nssv709458 M 17421 0 2 CAMTA1 nsv545298 1 7023292 7023438 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709460 M 17421 0 1 CAMTA1 esv2482000 1 7043630 7044699 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5354983 M 1 1 0 CAMTA1 NA18507 esv3577713 1 7047674 7054607 CNV loss Uddin_et_al_2014 25503493 SNP array essv9789311 M 873 0 1 CAMTA1 400871CM esv988826 1 7078203 7078203 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566621 M 3 1 0 CAMTA1 HuRef nsv519205 1 7090216 7099660 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696693 M 2026 0 1 CAMTA1 esv3585117 1 7116417 7119267 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846568 M 2504 0 1 CAMTA1 HG02783 esv990496 1 7147391 7159783 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563883 M 3 0 1 CAMTA1 HuRef esv2740361 1 7161904 7164364 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6946479,essv6710567 M 96 0 2 CAMTA1 SSM024,SSM042 dgv33e59 1 7163165 7164663 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3449661,esv3439401,esv3448182 M 185 3 0 CAMTA1 NA19238,NA19239,NA19240 nsv1133126 1 7163384 7163482 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987945 M 2 0 0 CAMTA1 KWS1 esv2740472 1 7163491 7164122 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6946479 M 96 0 1 CAMTA1 SSM024 esv2662615 1 7163578 7164357 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5825273,essv6389571,essv5407192,essv6390151,essv5546239,essv6392068,essv5640425,essv6170669,essv5705913,essv6221904,essv5586530,essv6080785,essv5687811,essv6400012,essv5772741,essv6400365,essv5778939,essv6400414,essv5824214,essv6404374,essv5751967,essv6082374,essv5680344,essv5922783,essv5700439,essv6414758,essv5586182,essv6038791,essv5700801,essv6417169,essv5567262,essv6417621,essv5474307,essv6420161,essv5614526,essv6425611,essv5604783,essv6551273,essv5506112,essv6106189,essv5622472,essv6436368,essv5508229,essv6443521,essv5798197,essv6446225,essv5816558,essv6263300,essv5661113,essv5939466,essv5643917,essv6262940,essv5700612,essv6291866,essv5714957,essv6267698,essv5570529,essv6058189,essv5637918,essv6091553,essv5559070,essv6157214,essv5680446,essv6136763,essv5449031,essv6478572,essv5646313,essv5969894,essv5644272,essv5976154,essv5695078,essv6572989,essv5424552,essv6235026,essv5432162,essv6297745,essv5437676,essv5921160,essv5669141,essv6581149,essv5693690,essv6249994,essv5614360,essv5931053,essv5670913,essv5934358,essv5743362,essv6133354,essv5467949,essv5847072,essv5577675,essv6542582,essv5516164,essv6071423,essv5435379,essv5874213,essv5608651,essv6522841,essv5396873,essv6313096,essv5411888,essv6031455,essv5545314,essv5846026,essv5635531,essv6120183,essv5809862,essv6213322,essv5765955,essv5914269,essv5779219,essv6236961,essv5562667,essv5988896,essv5727031,essv5969131,essv5773932,essv6471790,essv5457577,essv6320692,essv5458066,essv6552907,essv5610386,essv5957709,essv5698996,essv6326297,essv5817572,essv6142381,essv5434901,essv6059252,essv5640023,essv5996400,essv5582425,essv6550476,essv5747126,essv6260308,essv5435741,essv6509693,essv5725971,essv5847007,essv5443323,essv6541165,essv5530572,essv6034742,essv6336524,essv5886921,essv6058443,essv6339704,essv6340463,essv6539568,essv6179144,essv6570341,essv6179353,essv6342382,essv5834837,essv6464000,essv6220693,essv6048810,essv6284032,essv6280102,essv6151036,essv6021253,essv6252777,essv6045115,essv6038926,essv6031050,essv6035854,essv6081756,essv6349849,essv6524729,essv6475526,essv6083569,essv6024967,essv5884386,essv6077806,essv6486681,essv6117906,essv6359511,essv5865612,essv6237058,essv6118440,essv6062663,essv6477117,essv6510586,essv6003699,essv6021950,essv6239833,essv6105011,essv6002793,essv6088475,essv6585810,essv6495505,essv5969769,essv5905901,essv6049724,essv6246335,essv6001304,essv6201308,essv6049204,essv6508293,essv6493628,essv6256694,essv5910254,essv6206663,essv6103376,essv5924077,essv6236128 M 1151 0 207 CAMTA1 HG00106,HG00123,HG00133,HG00138,HG00140,HG00142,HG00148,HG00149,HG00154,HG00157,HG00174,HG00186,HG00187,HG00233,HG00242,HG00245,HG00262,HG00264,HG00272,HG00278,HG00308,HG00311,HG00312,HG00326,HG00336,HG00338,HG00339,HG00342,HG00357,HG00367,HG00380,HG00449,HG00478,HG00479,HG00533,HG00536,HG00537,HG00551,HG00581,HG00589,HG00590,HG00607,HG00626,HG00637,HG00641,HG00657,HG00684,HG00699,HG00701,HG00702,HG00707,HG00736,HG00737,HG00740,HG01048,HG01060,HG01080,HG01101,HG01125,HG01133,HG01134,HG01136,HG01149,HG01170,HG01254,HG01354,HG01365,HG01377,HG01384,HG01491,HG01497,HG01551,NA06989,NA11830,NA12045,NA12155,NA12272,NA12342,NA12347,NA12348,NA12778,NA18488,NA18489,NA18516,NA18519,NA18520,NA18543,NA18550,NA18564,NA18567,NA18611,NA18613,NA18616,NA18617,NA18631,NA18634,NA18637,NA18853,NA18856,NA18867,NA18873,NA18874,NA18908,NA18945,NA18959,NA18963,NA18964,NA18977,NA18982,NA18986,NA18988,NA19007,NA19010,NA19012,NA19060,NA19062,NA19079,NA19084,NA19092,NA19107,NA19130,NA19172,NA19189,NA19213,NA19223,NA19247,NA19248,NA19256,NA19312,NA19313,NA19315,NA19324,NA19327,NA19331,NA19334,NA19346,NA19350,NA19360,NA19376,NA19382,NA19384,NA19390,NA19396,NA19397,NA19428,NA19431,NA19435,NA19436,NA19439,NA19440,NA19443,NA19445,NA19448,NA19449,NA19452,NA19457,NA19463,NA19467,NA19469,NA19470,NA19471,NA19472,NA19473,NA19474,NA19625,NA19648,NA19658,NA19661,NA19676,NA19678,NA19685,NA19700,NA19701,NA19712,NA19713,NA19746,NA19780,NA19818,NA19819,NA19834,NA19900,NA19901,NA19916,NA19917,NA19982,NA20127,NA20332,NA20348,NA20510,NA20521,NA20533,NA20537,NA20541,NA20581,NA20757,NA20759,NA20770,NA20771,NA20785,NA20786,NA20787,NA20792,NA20796,NA20800,NA20802,NA20809,NA20810 nsv1075515 1 7163893 7163974 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3763525 M 1 0 1 CAMTA1 KWP1 nsv1145316 1 7163894 7163974 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982409 M 2 0 1 CAMTA1 KWS1 esv2444029 1 7164106 7164254 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5208770 M 1 0 1 CAMTA1 NA18507 nsv1076048 1 7164109 7164192 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3762850 M 1 0 1 CAMTA1 KWP1 esv2740584 1 7174710 7175533 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6937661,essv6929047,essv6824967,essv6906090,essv6756539,essv6682814,essv6843754,essv6742124,essv6880413,essv6729605,essv6696981,essv6846994,essv6853215,essv6784980,essv6916562,essv6859172,essv6816569,essv6735968,essv6816621,essv6859171,essv6669110,essv6888993,essv6888994,essv6810331,essv6895836,essv6804393,essv6766529,essv6954720,essv6898595,essv6972313,essv6750584,essv6668922,essv6668923,essv6703850,essv6863941,essv6961535,essv6679151 M 96 0 34 CAMTA1 SSM003,SSM005,SSM010,SSM011,SSM014,SSM020,SSM022,SSM026,SSM027,SSM029,SSM031,SSM033,SSM034,SSM038,SSM040,SSM047,SSM050,SSM053,SSM057,SSM059,SSM064,SSM069,SSM074,SSM076,SSM078,SSM080,SSM086,SSM087,SSM088,SSM089,SSM094,SSM097,SSM099,SSM100 esv2740695 1 7174774 7175085 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6929047,essv6906090,essv6756539,essv6682814,essv6843754,essv6742124,essv6729605,essv6880413,essv6859171,essv6916562,essv6853215,essv6816569,essv6735968,essv6888993,essv6810331,essv6895836,essv6846994,essv6804393,essv6766529,essv6937661,essv6824967,essv6954720,essv6784980,essv6898595,essv6750584,essv6972313,essv6668922,essv6679151,essv6863941 M 96 0 29 CAMTA1 SSM003,SSM011,SSM014,SSM020,SSM022,SSM026,SSM029,SSM031,SSM033,SSM034,SSM047,SSM050,SSM053,SSM057,SSM059,SSM064,SSM069,SSM074,SSM076,SSM078,SSM080,SSM086,SSM087,SSM088,SSM089,SSM094,SSM097,SSM099,SSM100 esv1124399 1 7174845 7175286 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4044198 M 2 0 1 CAMTA1 HuRef esv2740806 1 7174997 7175059 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961535 M 96 0 1 CAMTA1 SSM027 esv2740917 1 7175202 7175508 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6696981,essv6859172,essv6669110,essv6888994,essv6668923,essv6703850 M 96 0 6 CAMTA1 SSM005,SSM031,SSM038,SSM040,SSM088,SSM097 esv2741028 1 7175354 7175695 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6682815,essv6876632,essv6839959,essv6718155,essv6710568,essv6714229,essv6784981,essv6859173,essv6753481,essv6846995,essv6810333,essv6892307,essv6789135,essv6750585,essv6703851,essv6863943,essv6961536 M 96 0 17 CAMTA1 SSM012,SSM027,SSM034,SSM040,SSM042,SSM043,SSM044,SSM057,SSM058,SSM069,SSM070,SSM076,SSM084,SSM086,SSM088,SSM089,SSM098 esv2741139 1 7175622 7175693 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6846995,essv6972314,essv6961536 M 96 0 3 CAMTA1 SSM027,SSM029,SSM086 nsv1124184 1 7175666 7175757 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3975494 M 2 0 1 CAMTA1 KWS1 nsv462394 1 7186325 7231484 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538567 M 1557 0 1 CAMTA1 HGDP00797 nsv545299 1 7186325 7231484 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173656 M 17421 0 1 CAMTA1 HGDP00797 esv3585118 1 7189807 7198688 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846569 M 2504 0 1 CAMTA1 NA19309 esv3585119 1 7196138 7197576 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846570 M 2504 0 1 CAMTA1 HG02147 nsv476621 1 7320485 7320485 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013335 M 9 1 0 CAMTA1 NA12878 dgv10e212 1 7321611 7331314 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577714,esv3577715 M 873 0 2 CAMTA1 401566DD,401908YM esv275496 1 7324468 7325408 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586154 M 1250 0 1 CAMTA1 esv3585122 1 7352610 7374350 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846667 M 2504 0 1 CAMTA1 HG01883 nsv1116585 1 7370655 7370707 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3978769 M 2 0 0 CAMTA1 KWS2 esv3541122 1 7397569 7397626 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9739869 M 767 0 1 CAMTA1 nsv1001550 1 7400404 7452010 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3480881 M 29084 1 0 CAMTA1 nsv1410 1 7415626 7439988 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1411 M 9 1 0 CAMTA1 NA19240 nsv955211 1 7445001 7450800 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001678 M 1 0 1 CAMTA1 BILGI_BIOE nsv955212 1 7463401 7469300 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001689 M 1 0 1 CAMTA1 BILGI_BIOE nsv955213 1 7477301 7581800 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001700 M 1 0 1 CAMTA1 BILGI_BIOE esv3585123 1 7481066 7503506 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846668 M 2504 1 0 CAMTA1 HG03615 esv2666029 1 7483023 7486286 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6179805,essv6204851 M 1151 0 2 CAMTA1 NA19455,NA19472 nsv527338 1 7483046 7486317 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703764 M 2026 0 1 CAMTA1 esv3585124 1 7483051 7486289 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9846669,essv9846672,essv9846671,essv9846670,essv9846673 M 2504 0 5 CAMTA1 HG02643,NA19036,NA19455,NA19472,NA20359 esv3363193 1 7486206 7486290 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674084 M 185 1 0 CAMTA1 NA19238 esv3345755 1 7486240 7486259 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593491 M 185 1 0 CAMTA1 NA19141 esv3304817 1 7486241 7486242 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7771632,essv7827924,essv7825960,essv7791741,essv7781222,essv7811156,essv7782120 M 185 7 0 CAMTA1 NA18498,NA18508,NA18871,NA19093,NA19108,NA19141,NA19238 esv3421992 1 7486248 7486264 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898522,essv8898521,essv8898524,essv8898523,essv8898520 M 185 5 0 CAMTA1 NA18498,NA18508,NA18871,NA19093,NA19108 nsv831758 1 7491357 7671673 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442584,nssv1442562,nssv1442551,nssv1442573 M 95 1 3 CAMTA1 nsv522589 1 7507642 7519264 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705976 M 2026 0 1 CAMTA1 nsv518903 1 7513025 7518698 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696361 M 2026 0 1 CAMTA1 esv2741250 1 7516973 7517136 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954721 M 96 0 1 CAMTA1 SSM026 esv2741361 1 7533944 7534581 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933293,essv6883248,essv6950536,essv6967915,essv6747763,essv6742125,essv6759028,essv6972315,essv6816570,essv6853216,essv6748165,essv6753482,essv6756540,essv6750587 M 96 0 14 CAMTA1 SSM008,SSM021,SSM025,SSM028,SSM029,SSM053,SSM056,SSM057,SSM058,SSM059,SSM061,SSM078,SSM087,SSM095 nsv1153960 1 7534267 7534327 CNV deletion John_et_al_2014 26484159 Sequencing nssv4003234 M 1 0 1 CAMTA1 KWB1 esv3394495 1 7539665 7541163 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692404 M 185 1 0 CAMTA1 NA19240 nsv526782 1 7547212 7549488 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703134 M 2026 0 1 CAMTA1 esv2661964 1 7552939 7553255 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5659994,essv6293916,essv5460735,essv6294946,essv5519409,essv6519373,essv5654342,essv5837134,essv5543317,essv6359806,essv5631811,essv5976416,essv5767850,essv5930148,essv5563441,essv6496652,essv5770295,essv6388199,essv5455258 M 1151 0 19 CAMTA1 HG00182,HG00268,NA07048,NA07346,NA12272,NA12348,NA12751,NA12775,NA18595,NA19068,NA20537,NA20581,NA20770,NA20773,NA20787,NA20796,NA20807,NA20826,NA20828 esv2647714 1 7552972 7553235 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5309036 M 1 0 1 CAMTA1 NA18507 nsv1133802 1 7553097 7553154 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969372 M 2 0 1 CAMTA1 KWS2 nsv1075104 1 7553377 7553437 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3773000 M 1 0 1 CAMTA1 KWP1 nsv1116586 1 7553390 7553445 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3978770 M 2 0 0 CAMTA1 KWS2 esv1935214 1 7553390 7553700 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4549214 M 1 0 1 CAMTA1 NA18507 nsv1122289 1 7553432 7553541 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969740 M 2 0 1 CAMTA1 KWS2 nsv527595 1 7557152 7567412 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704056 M 2026 0 1 CAMTA1 nsv545300 1 7557152 7567412 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709461 M 17421 0 1 CAMTA1 dgv34e59 1 7557465 7560763 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3370220,esv3369338 M 185 2 0 CAMTA1 NA19239,NA19240 esv3410484 1 7558265 7560463 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692407 M 185 1 0 CAMTA1 NA19238 esv2741472 1 7558571 7561170 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6946480,essv6902517,essv6859174,essv6821167,essv6710569,essv6950095,essv6836180,essv6686145,essv6910027,essv6921702,essv6784982,essv6913987,essv6895837,essv6972316,essv6937663,essv6954722,essv6941769,essv6898596,essv6898601,essv6668924,essv6753483,essv6925677,essv6925676,essv6937664,essv6937665 M 96 0 21 CAMTA1 SSM004,SSM013,SSM015,SSM016,SSM018,SSM019,SSM022,SSM023,SSM024,SSM026,SSM029,SSM031,SSM035,SSM042,SSM058,SSM069,SSM079,SSM083,SSM088,SSM099,SSM100 nsv1076053 1 7558757 7558811 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764099 M 1 0 1 CAMTA1 KWP1 nsv1113070 1 7558758 7558811 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967961 M 2 0 1 CAMTA1 KWS2 esv2741695 1 7558767 7558973 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6925676 M 96 0 1 CAMTA1 SSM019 dgv3e201 1 7558767 7559448 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2741583,esv2741806 M 96 0 5 CAMTA1 SSM015,SSM019,SSM022,SSM024,SSM069 nsv1133804 1 7558972 7559103 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969374 M 2 0 1 CAMTA1 KWS2 nsv1140405 1 7558996 7559069 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3979111 M 2 0 0 CAMTA1 KWS2 nsv1075528 1 7559025 7559103 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767800 M 1 0 1 CAMTA1 KWP1 esv2741917 1 7559176 7560063 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6902517,essv6821167,essv6710569,essv6950095,essv6686145,essv6836180,essv6921702,essv6753483,essv6895837,essv6898601,essv6898596,essv6668924,essv6941769,essv6925677,essv6937665,essv6937664 M 96 0 14 CAMTA1 SSM004,SSM013,SSM018,SSM019,SSM022,SSM023,SSM031,SSM035,SSM042,SSM058,SSM079,SSM083,SSM099,SSM100 nsv1144346 1 7559189 7559264 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995095 M 2 0 1 CAMTA1 KWS1 esv2661908 1 7559443 7560192 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5529359,essv6482932,essv5814285,essv6387039,essv5575074,essv6124063,essv5788311,essv6041331,essv5516870,essv6550513,essv5583577,essv6114357,essv5730675,essv6413800,essv5457551,essv6576540,essv5709998,essv6268374,essv5436826,essv5851944,essv5739381,essv6256312,essv5508604,essv6566368,essv5663358,essv6427001,essv6226576,essv6243910,essv5997726,essv6453030,essv5974102,essv6542409,essv5880716,essv6241832,essv6037941,essv6242215,essv6515957,essv6544631,essv6323846,essv6483131,essv5975923,essv6249502,essv6052009,essv5962151,essv6337763,essv6338713,essv6002886,essv6486219,essv6345359,essv5840912,essv6539128,essv5922093,essv6273213,essv6221071,essv6067706,essv5850234,essv6276685,essv6557749,essv6248487,essv6277708 M 1151 0 60 CAMTA1 HG00106,HG00112,HG00123,HG00125,HG00239,HG00306,HG00418,HG00427,HG00512,HG00525,HG00566,HG00577,HG00580,HG00584,HG00595,HG00608,HG00654,HG00656,HG00663,HG00689,HG00692,HG00702,HG00704,HG00705,HG00707,HG01051,HG01075,HG01183,HG01440,NA11994,NA18549,NA18550,NA18593,NA18596,NA18615,NA18616,NA18623,NA18628,NA18634,NA18635,NA18961,NA18963,NA18984,NA19010,NA19074,NA19075,NA19077,NA19082,NA19130,NA19395,NA19434,NA19449,NA19453,NA19457,NA19684,NA19834,NA20518,NA20521,NA20586,NA20787 nsv1137723 1 7559452 7559525 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990230 M 2 0 1 CAMTA1 KWS2 nsv1116587 1 7559523 7559600 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3978771 M 2 0 0 CAMTA1 KWS2 nsv1075533 1 7559802 7559854 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767620 M 1 0 1 CAMTA1 KWP1 nsv826364 1 7566435 7567432 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1421439 M 31 1 0 CAMTA1 NA18997 nsv545301 1 7567412 7571071 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709462 M 17421 0 1 CAMTA1 nsv7991 1 7568485 7571753 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26894 M 31 1 0 CAMTA1 NA18860 esv28432 1 7569215 7571521 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12117 M 40 28 1 CAMTA1 NA06985,NA11931,NA12004,NA12006,NA12156,NA12287,NA12414,NA12489,NA12749,NA12828,NA15510,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19147,NA19190,NA19225,NA19240,NA19257 nsv820592 1 7569215 7571601 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420846 M 1 0 1 CAMTA1 NA10851 nsv826475 1 7569215 7571601 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1425484,nssv1430329,nssv1422357,nssv1438581,nssv1427245,nssv1421440,nssv1426370,nssv1423943,nssv1431057,nssv1440113,nssv1428015,nssv1424725,nssv1431790 M 31 0 13 CAMTA1 AK10,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18552,NA18564,NA18582,NA18973,NA18997 esv2592830 1 7569617 7572326 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5286155 M 1 0 1 CAMTA1 NA18507 dgv88n54 1 7569814 7571071 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545307,nsv545312,nsv545311,nsv545302,nsv545313 M 17421 0 11 CAMTA1 dgv89n54 1 7569814 7571463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545306,nsv545310,nsv545303,nsv545316 M 17421 0 91 CAMTA1 esv7233 1 7569814 7571766 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29674 M 1 0 0 CAMTA1 dgv90n54 1 7569814 7572262 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545304,nsv545305 M 17421 0 2 CAMTA1 nsv819302 1 7569818 7571415 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419290 M 2 0 1 CAMTA1 AK1 esv2190574 1 7569911 7571692 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4836092 M 1 0 1 CAMTA1 NA18507 dgv91n54 1 7569976 7571326 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545314,nsv545308,nsv545315,nsv545309 M 17421 0 11 CAMTA1 esv3541344 1 7569992 7571561 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9740091 M 767 0 1 CAMTA1 esv3915 1 7570034 7571684 CNV loss Wang_et_al_2008 18987735 Sequencing essv26356 M 1 0 1 CAMTA1 YH esv2742028 1 7570043 7571536 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6883249,essv6669121,essv6902518,essv6933294,essv6744926,essv6832586,essv6682816,essv6692747,essv6759029,essv6821168,essv6776925,essv6742126,essv6800598,essv6710570,essv6885976,essv6718156,essv6686146,essv6769506,essv6895838,essv6916573,essv6910029,essv6816571,essv6950106,essv6748176,essv6921703,essv6853217,essv6888995,essv6784983,essv6773424,essv6804394,essv6972318,essv6789136,essv6766530,essv6898602,essv6954723,essv6675190,essv6668925,essv6695576,essv6703852,essv6780853,essv6925678,essv6707252,essv6874691,essv6753484,essv6961537,essv6738799,essv6917411 M 96 0 47 CAMTA1 SSM002,SSM003,SSM004,SSM005,SSM006,SSM008,SSM013,SSM015,SSM017,SSM018,SSM019,SSM021,SSM026,SSM027,SSM029,SSM031,SSM032,SSM034,SSM035,SSM037,SSM040,SSM041,SSM042,SSM044,SSM052,SSM053,SSM055,SSM058,SSM061,SSM064,SSM065,SSM066,SSM067,SSM068,SSM069,SSM070,SSM074,SSM078,SSM079,SSM082,SSM087,SSM092,SSM095,SSM096,SSM097,SSM099,SSM100 nsv1074663 1 7570070 7571526 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766869 M 1 0 1 CAMTA1 KWP1 dgv31n106 1 7570071 7571526 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1120975,nsv1134961,nsv1121065 M 2 0 1 CAMTA1 KWS2 esv2657512 1 7570071 7571526 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6597320,essv5450460,essv6535980,essv5497751,essv6527507,essv5429536,essv6575482,essv5399289,essv6536764,essv5461375,essv6561443,essv5636594,essv6543277,essv5465801,essv6542778,essv5732462,essv6544648,essv5552465,essv6542461,essv5622190,essv6538809,essv5658671,essv6578015,essv5503175,essv6572516,essv5412555,essv6538832,essv5687666,essv6595199,essv5568082,essv6581519,essv5727746,essv6548964,essv5717552,essv6564812,essv5612440,essv6528378,essv5428010,essv6544861,essv5646630,essv6577034,essv5630336,essv5898881,essv5589809,essv6460683,essv5596979,essv5826648,essv5559722,essv6063213,essv5420861,essv5891446,essv5675761,essv6387037,essv5421776,essv6085784,essv5621604,essv5774461,essv5605115,essv5793684,essv5692329,essv6149199,essv5559985,essv6100322,essv5602417,essv5790430,essv5576898,essv6392822,essv5507085,essv6464636,essv5537806,essv5833907,essv5522275,essv6189325,essv5397363,essv6497319,essv5621444,essv6399921,essv5489293,essv6290633,essv5703541,essv6118990,essv5440192,essv5825537,essv5686531,essv6099962,essv5620153,essv5796224,essv5482762,essv6413777,essv5609761,essv5928849,essv5505561,essv6295813,essv5499302,essv5931759,essv5648473,essv6418480,essv5433351,essv6418911,essv5511424,essv6419778,essv5631596,essv5961649,essv5404078,essv6146355,essv5542914,essv5927894,essv5618196,essv6424790,essv5432008,essv6109378,essv5445583,essv6431057,essv5621944,essv5841667,essv5506505,essv5799224,essv5479781,essv6281857,essv5536940,essv6436832,essv5597762,essv6438064,essv5446598,essv6438446,essv5500732,essv6495337,essv5708133,essv5781061,essv5431607,essv6442019,essv5598326,essv6148159,essv5647981,essv6442157,essv5433597,essv6445191,essv5691391,essv6445705,essv5430800,essv6447140,essv5556929,essv6449470,essv5957916,essv5927521,essv6453378,essv6133433,essv6014564,essv6291742,essv6294648,essv6292739,essv6465910,essv5887358,essv5896582,essv6253213,essv5950392,essv6018100,essv5800783,essv6053521,essv6491045,essv6483263,essv5902435,essv6298889,essv6460438,essv6069629,essv5766898,essv6301711,essv5924719,essv6231964,essv6303084,essv6303515,essv6303691,essv6287100,essv5875330,essv6308899,essv6004098,essv6068568,essv6310275,essv6027439,essv5815954,essv6228501,essv6515447,essv6315369,essv5798315,essv5771007,essv6075734,essv5744317,essv6204790,essv6090700,essv5829887,essv6317995,essv6246172,essv6193427,essv6030341,essv6207963,essv6160626,essv6039563,essv5771428,essv6119227,essv6081607,essv5998324,essv6325203,essv6325429,essv5823780,essv5863502,essv5830971,essv6214231,essv6199820,essv6506715,essv6127324,essv6193468,essv6123121,essv6083900,essv6332805,essv5913542,essv6242378,essv6169504,essv6496136,essv6266308,essv6009563,essv6278813,essv5981620,essv6260423,essv6007472,essv5908549,essv6288927,essv6061070,essv5883741,essv5853039,essv5818092,essv5863653,essv6049159,essv5902353,essv6481631,essv6506775,essv6057755,essv5978907,essv6160948,essv5898397,essv5922932,essv5858235,essv6354211,essv6458057,essv6458151,essv6354985,essv6069004,essv6286695,essv5966237,essv5898893,essv6046099,essv5754165,essv6134386,essv5806520,essv5979160,essv6514311,essv6233292,essv6015013,essv6363379,essv6363517,essv6364050,essv5819410,essv6253385,essv5876669,essv6366028,essv6366589,essv6216050,essv6367627,essv6519589,essv6086542,essv5921143,essv6372156,essv6044362,essv6471769,essv6016935,essv6171336,essv6013738,essv5852805,essv6041407,essv6376701,essv5973166,essv6271138,essv6377227,essv6233645,essv5942501,essv5778687,essv6167253,essv6135664,essv5749177,essv6385424,essv5888481,essv5909185,essv5971897,essv6202404 M 1151 0 293 CAMTA1 HG00096,HG00108,HG00111,HG00123,HG00137,HG00141,HG00145,HG00146,HG00149,HG00150,HG00177,HG00183,HG00185,HG00187,HG00188,HG00189,HG00244,HG00245,HG00246,HG00250,HG00257,HG00258,HG00259,HG00261,HG00263,HG00267,HG00270,HG00276,HG00281,HG00284,HG00309,HG00323,HG00324,HG00326,HG00329,HG00331,HG00334,HG00335,HG00337,HG00339,HG00357,HG00366,HG00372,HG00418,HG00422,HG00427,HG00428,HG00448,HG00463,HG00464,HG00472,HG00476,HG00478,HG00500,HG00501,HG00512,HG00524,HG00525,HG00531,HG00533,HG00534,HG00542,HG00543,HG00554,HG00556,HG00557,HG00560,HG00566,HG00577,HG00584,HG00589,HG00590,HG00595,HG00596,HG00608,HG00628,HG00641,HG00650,HG00653,HG00654,HG00656,HG00657,HG00663,HG00689,HG00692,HG00693,HG00698,HG00702,HG00704,HG00705,HG00707,HG00731,HG00740,HG01047,HG01061,HG01067,HG01072,HG01073,HG01080,HG01082,HG01083,HG01094,HG01107,HG01125,HG01137,HG01168,HG01170,HG01171,HG01174,HG01188,HG01334,HG01342,HG01375,HG01461,HG01497,HG01521,NA06986,NA06989,NA07000,NA07056,NA07346,NA10851,NA11829,NA11843,NA11894,NA11933,NA11993,NA11995,NA12044,NA12058,NA12155,NA12249,NA12272,NA12275,NA12282,NA12286,NA12341,NA12348,NA12414,NA12716,NA12748,NA12750,NA12751,NA12761,NA12763,NA12776,NA12778,NA12878,NA12889,NA12891,NA18507,NA18516,NA18543,NA18545,NA18546,NA18549,NA18550,NA18552,NA18553,NA18557,NA18561,NA18564,NA18565,NA18570,NA18571,NA18574,NA18576,NA18577,NA18579,NA18582,NA18593,NA18596,NA18597,NA18603,NA18608,NA18612,NA18613,NA18616,NA18618,NA18622,NA18623,NA18632,NA18633,NA18634,NA18635,NA18637,NA18638,NA18910,NA18917,NA18940,NA18961,NA18963,NA18971,NA18973,NA18974,NA18976,NA18982,NA18984,NA18985,NA18986,NA18989,NA18990,NA19002,NA19003,NA19004,NA19005,NA19012,NA19054,NA19055,NA19056,NA19058,NA19059,NA19064,NA19065,NA19066,NA19070,NA19074,NA19075,NA19077,NA19082,NA19083,NA19087,NA19107,NA19129,NA19172,NA19201,NA19347,NA19380,NA19382,NA19383,NA19399,NA19428,NA19429,NA19443,NA19455,NA19456,NA19461,NA19463,NA19470,NA19648,NA19652,NA19660,NA19661,NA19663,NA19670,NA19678,NA19681,NA19716,NA19717,NA19719,NA19762,NA19773,NA19776,NA19782,NA19783,NA19900,NA19904,NA19917,NA20291,NA20340,NA20344,NA20502,NA20507,NA20516,NA20524,NA20525,NA20528,NA20529,NA20530,NA20531,NA20534,NA20535,NA20540,NA20541,NA20542,NA20586,NA20588,NA20589,NA20754,NA20761,NA20765,NA20769,NA20771,NA20778,NA20801,NA20804,NA20807,NA20808,NA20811,NA20812,NA20816,NA20818,NA20826 nsv958568 1 7570074 7571485 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3004927 M 1 0 1 CAMTA1 BILGI_BIOE esv3585126 1 7570074 7571521 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847396,essv9847395,essv9846828,essv9846827,essv9846826,essv9846825,essv9846760,essv9846759,essv9846749,essv9846758,essv9846748,essv9846747,essv9846746,essv9846752,essv9846757,essv9846751,essv9846750,essv9846753,essv9846756,essv9846755,essv9846754,essv9846791,essv9846774,essv9846765,essv9846824,essv9846764,essv9846762,essv9846761,essv9846763,essv9846768,essv9846766,essv9846773,essv9846767,essv9846772,essv9846769,essv9846771,essv9846770,essv9846776,essv9846781,essv9846775,essv9846790,essv9846780,essv9846777,essv9846779,essv9846778,essv9846784,essv9846789,essv9846783,essv9846782,essv9846788,essv9846785,essv9846787,essv9846786,essv9846806,essv9846797,essv9846823,essv9846796,essv9846793,essv9846792,essv9846795,essv9846794,essv9846805,essv9846800,essv9846799,essv9846798,essv9846801,essv9846804,essv9846803,essv9846802,essv9846822,essv9846813,essv9846808,essv9846807,essv9846812,essv9846809,essv9846811,essv9846810,essv9846816,essv9846821,essv9846815,essv9846814,essv9846817,essv9846820,essv9846819,essv9846818,essv9846829,essv9846853,essv9847080,essv9846951,essv9846836,essv9846886,essv9846831,essv9846830,essv9846835,essv9846834,essv9846833,essv9846832,essv9846838,essv9847300,essv9846852,essv9846843,essv9847394,essv9846837,essv9847338,essv9846839,essv9846842,essv9846841,essv9846840,essv9846846,essv9846851,essv9846845,essv9846844,essv9846847,essv9846850,essv9846849,essv9846848,essv9846859,essv9846854,essv9846868,essv9846885,essv9846858,essv9846855,essv9846857,essv9846856,essv9846862,essv9846867,essv9846861,essv9846860,essv9846863,essv9846866,essv9846865,essv9846864,essv9846875,essv9846870,essv9846884,essv9846869,essv9846874,essv9846871,essv9846873,essv9846872,essv9846878,essv9846883,essv9846877,essv9846876,essv9846879,essv9846882,essv9846881,essv9846880,essv9846891,essv9846950,essv9846887,essv9846917,essv9846890,essv9846900,essv9846889,essv9846888,essv9846894,essv9846899,essv9846893,essv9846892,essv9846898,essv9846895,essv9846897,essv9846896,essv9846916,essv9846907,essv9846902,essv9846901,essv9846906,essv9846903,essv9846905,essv9846904,essv9846910,essv9846915,essv9846909,essv9846908,essv9846914,essv9846911,essv9846913,essv9846912,essv9846949,essv9846918,essv9846932,essv9846923,essv9846922,essv9846919,essv9846921,essv9846920,essv9846926,essv9846931,essv9846925,essv9846924,essv9846927,essv9846930,essv9846929,essv9846928,essv9846939,essv9846934,essv9846948,essv9846933,essv9846938,essv9846935,essv9846937,essv9846936,essv9846942,essv9846947,essv9846941,essv9846940,essv9846943,essv9846946,essv9846945,essv9846944,essv9846964,essv9846955,essv9847079,essv9846952,essv9846954,essv9846981,essv9846953,essv9847014,essv9846963,essv9846958,essv9846957,essv9846956,essv9846959,essv9846962,essv9846961,essv9846960,essv9846966,essv9846980,essv9846971,essv9846965,essv9846970,essv9846967,essv9846969,essv9846968,essv9846974,essv9846979,essv9846973,essv9846972,essv9846975,essv9846978,essv9846977,essv9846976,essv9846982,essv9847013,essv9846987,essv9846996,essv9846983,essv9846986,essv9846985,essv9846984,essv9846995,essv9846990,essv9846989,essv9846988,essv9846991,essv9846994,essv9846993,essv9846992,essv9846997,essv9846998,essv9847003,essv9847012,essv9847002,essv9846999,essv9847001,essv9847000,essv9847004,essv9847011,essv9847006,essv9847005,essv9847007,essv9847010,essv9847009,essv9847008,essv9847045,essv9847019,essv9847028,essv9847018,essv9847015,essv9847078,essv9847017,essv9847016,essv9847022,essv9847027,essv9847021,essv9847020,essv9847026,essv9847023,essv9847025,essv9847024,essv9847035,essv9847030,essv9847044,essv9847029,essv9847034,essv9847031,essv9847033,essv9847032,essv9847038,essv9847043,essv9847037,essv9847036,essv9847039,essv9847042,essv9847041,essv9847040,essv9847046,essv9847077,essv9847060,essv9847051,essv9847047,essv9847050,essv9847049,essv9847048,essv9847054,essv9847059,essv9847053,essv9847052,essv9847058,essv9847055,essv9847057,essv9847056,essv9847067,essv9847062,essv9847061,essv9847076,essv9847066,essv9847063,essv9847065,essv9847064,essv9847068,essv9847075,essv9847070,essv9847069,essv9847074,essv9847071,essv9847073,essv9847072,essv9847141,essv9847091,essv9847108,essv9847090,essv9847085,essv9847082,essv9847081,essv9847206,essv9847083,essv9847084,essv9847299,essv9847337,essv9847086,essv9847089,essv9847088,essv9847087,essv9847098,essv9847093,essv9847092,essv9847107,essv9847094,essv9847097,essv9847096,essv9847095,essv9847101,essv9847106,essv9847100,essv9847099,essv9847105,essv9847102,essv9847104,essv9847103,essv9847109,essv9847123,essv9847114,essv9847140,essv9847110,essv9847113,essv9847112,essv9847111,essv9847117,essv9847122,essv9847116,essv9847115,essv9847118,essv9847121,essv9847120,essv9847119,essv9847125,essv9847130,essv9847139,essv9847124,essv9847126,essv9847129,essv9847128,essv9847127,essv9847133,essv9847138,essv9847132,essv9847131,essv9847134,essv9847137,essv9847136,essv9847135,essv9847146,essv9847155,essv9847145,essv9847144,essv9847143,essv9847142,essv9847172,essv9847205,essv9847154,essv9847149,essv9847148,essv9847147,essv9847153,essv9847150,essv9847152,essv9847151,essv9847171,essv9847162,essv9847157,essv9847156,essv9847161,essv9847158,essv9847160,essv9847159,essv9847165,essv9847163,essv9847170,essv9847164,essv9847166,essv9847169,essv9847168,essv9847167,essv9847173,essv9847204,essv9847178,essv9847187,essv9847177,essv9847174,essv9847176,essv9847175,essv9847181,essv9847186,essv9847180,essv9847179,essv9847185,essv9847182,essv9847184,essv9847183,essv9847189,essv9847188,essv9847203,essv9847194,essv9847193,essv9847190,essv9847191,essv9847192,essv9847197,essv9847202,essv9847196,essv9847195,essv9847198,essv9847201,essv9847200,essv9847199,essv9847336,essv9847218,essv9847298,essv9847208,essv9847207,essv9847268,essv9847235,essv9847212,essv9847209,essv9847217,essv9847211,essv9847210,essv9847216,essv9847213,essv9847215,essv9847214,essv9847220,essv9847225,essv9847219,essv9847234,essv9847224,essv9847221,essv9847223,essv9847222,essv9847228,essv9847226,essv9847233,essv9847227,essv9847232,essv9847229,essv9847230,essv9847231,essv9847267,essv9847250,essv9847236,essv9847241,essv9847237,essv9847240,essv9847239,essv9847238,essv9847244,essv9847242,essv9847249,essv9847243,essv9847248,essv9847245,essv9847247,essv9847246,essv9847266,essv9847257,essv9847251,essv9847252,essv9847256,essv9847253,essv9847255,essv9847254,essv9847260,essv9847265,essv9847259,essv9847258,essv9847261,essv9847264,essv9847263,essv9847262,essv9847280,essv9847297,essv9847296,essv9847274,essv9847335,essv9847270,essv9847302,essv9847269,essv9847273,essv9847272,essv9847279,essv9847271,essv9847278,essv9847275,essv9847277,essv9847276,essv9847286,essv9847295,essv9847281,essv9847301,essv9847282,essv9847285,essv9847284,essv9847283,essv9847289,essv9847294,essv9847288,essv9847287,essv9847290,essv9847293,essv9847292,essv9847291,essv9847303,essv9847308,essv9847317,essv9847334,essv9847304,essv9847307,essv9847306,essv9847305,essv9847311,essv9847316,essv9847310,essv9847309,essv9847312,essv9847315,essv9847314,essv9847313,essv9847319,essv9847324,essv9847318,essv9847333,essv9847323,essv9847320,essv9847322,essv9847321,essv9847327,essv9847332,essv9847326,essv9847325,essv9847328,essv9847331,essv9847330,essv9847329,essv9847343,essv9847344,essv9847391,essv9847359,essv9847392,essv9847390,essv9847362,essv9847340,essv9847393,essv9847342,essv9847402,essv9847467,essv9847341,essv9847339,essv9847349,essv9847358,essv9847350,essv9847361,essv9847348,essv9847346,essv9847345,essv9847347,essv9847357,essv9847352,essv9847360,essv9847351,essv9847356,essv9847354,essv9847353,essv9847355,essv9847365,essv9847369,essv9847376,essv9847366,essv9847389,essv9847401,essv9847364,essv9847363,essv9847370,essv9847367,essv9847368,essv9847375,essv9847374,essv9847371,essv9847373,essv9847372,essv9847400,essv9847388,essv9847382,essv9847377,essv9847381,essv9847378,essv9847380,essv9847379,essv9847387,essv9847384,essv9847399,essv9847383,essv9847386,essv9847398,essv9847385,essv9847397,essv9847433,essv9847416,essv9847407,essv9847406,essv9847403,essv9847466,essv9847405,essv9847404,essv9847415,essv9847410,essv9847409,essv9847408,essv9847414,essv9847411,essv9847413,essv9847412,essv9847423,essv9847418,essv9847417,essv9847432,essv9847419,essv9847422,essv9847421,essv9847420,essv9847426,essv9847431,essv9847425,essv9847424,essv9847430,essv9847427,essv9847429,essv9847428,essv9847448,essv9847439,essv9847434,essv9847465,essv9847438,essv9847435,essv9847437,essv9847436,essv9847442,essv9847447,essv9847441,essv9847440,essv9847446,essv9847443,essv9847445,essv9847444,essv9847455,essv9847450,essv9847449,essv9847464,essv9847454,essv9847451,essv9847453,essv9847452,essv9847458,essv9847457,essv9847456,essv9847463,essv9847459,essv9847462,essv9847461,essv9847460,essv9847473,essv9847474,essv9847468,essv9847472,essv9847471,essv9847469,essv9847470,essv9847475,essv9847476 M 2504 0 731 CAMTA1 HG00096,HG00097,HG00108,HG00110,HG00111,HG00113,HG00118,HG00123,HG00127,HG00129,HG00130,HG00137,HG00141,HG00145,HG00146,HG00149,HG00150,HG00177,HG00183,HG00185,HG00187,HG00188,HG00189,HG00238,HG00240,HG00244,HG00245,HG00246,HG00250,HG00257,HG00258,HG00259,HG00261,HG00263,HG00267,HG00276,HG00281,HG00284,HG00304,HG00309,HG00323,HG00324,HG00326,HG00329,HG00331,HG00332,HG00334,HG00335,HG00337,HG00339,HG00349,HG00350,HG00351,HG00356,HG00357,HG00360,HG00365,HG00366,HG00368,HG00371,HG00372,HG00376,HG00382,HG00410,HG00422,HG00428,HG00446,HG00448,HG00452,HG00463,HG00464,HG00472,HG00476,HG00478,HG00500,HG00524,HG00525,HG00531,HG00533,HG00534,HG00542,HG00543,HG00554,HG00556,HG00557,HG00560,HG00566,HG00584,HG00589,HG00590,HG00595,HG00596,HG00598,HG00608,HG00628,HG00634,HG00637,HG00641,HG00650,HG00653,HG00654,HG00656,HG00657,HG00663,HG00674,HG00675,HG00689,HG00692,HG00693,HG00698,HG00704,HG00705,HG00707,HG00717,HG00731,HG00740,HG00844,HG00867,HG00956,HG00982,HG01028,HG01046,HG01047,HG01049,HG01061,HG01067,HG01072,HG01073,HG01080,HG01082,HG01083,HG01085,HG01088,HG01094,HG01104,HG01105,HG01107,HG01125,HG01130,HG01137,HG01148,HG01161,HG01168,HG01170,HG01171,HG01174,HG01177,HG01188,HG01200,HG01259,HG01280,HG01323,HG01334,HG01341,HG01342,HG01375,HG01392,HG01395,HG01405,HG01413,HG01414,HG01461,HG01497,HG01503,HG01504,HG01518,HG01521,HG01525,HG01528,HG01530,HG01531,HG01566,HG01577,HG01593,HG01597,HG01600,HG01602,HG01603,HG01606,HG01612,HG01615,HG01617,HG01624,HG01628,HG01630,HG01632,HG01668,HG01669,HG01670,HG01673,HG01675,HG01676,HG01679,HG01682,HG01686,HG01695,HG01699,HG01708,HG01757,HG01762,HG01766,HG01767,HG01775,HG01776,HG01777,HG01784,HG01785,HG01797,HG01801,HG01802,HG01804,HG01805,HG01807,HG01810,HG01813,HG01817,HG01840,HG01845,HG01846,HG01847,HG01848,HG01849,HG01850,HG01852,HG01857,HG01858,HG01859,HG01862,HG01864,HG01865,HG01867,HG01869,HG01871,HG01872,HG01874,HG01878,HG01920,HG01932,HG01933,HG01944,HG01977,HG01985,HG02016,HG02017,HG02019,HG02020,HG02025,HG02028,HG02032,HG02040,HG02047,HG02049,HG02050,HG02060,HG02061,HG02069,HG02072,HG02073,HG02076,HG02078,HG02081,HG02082,HG02084,HG02085,HG02086,HG02087,HG02089,HG02113,HG02122,HG02127,HG02128,HG02130,HG02133,HG02136,HG02138,HG02140,HG02144,HG02151,HG02152,HG02154,HG02155,HG02156,HG02164,HG02165,HG02166,HG02178,HG02181,HG02185,HG02186,HG02190,HG02233,HG02235,HG02236,HG02250,HG02253,HG02259,HG02283,HG02291,HG02334,HG02353,HG02355,HG02356,HG02360,HG02364,HG02371,HG02373,HG02374,HG02375,HG02379,HG02380,HG02382,HG02384,HG02385,HG02389,HG02390,HG02391,HG02392,HG02394,HG02396,HG02397,HG02398,HG02399,HG02402,HG02406,HG02407,HG02425,HG02427,HG02439,HG02450,HG02462,HG02470,HG02490,HG02493,HG02494,HG02497,HG02501,HG02508,HG02522,HG02536,HG02541,HG02554,HG02558,HG02585,HG02601,HG02620,HG02629,HG02645,HG02648,HG02657,HG02658,HG02661,HG02667,HG02690,HG02691,HG02731,HG02736,HG02774,HG02778,HG02805,HG02810,HG02836,HG02870,HG02878,HG02881,HG02885,HG02952,HG03006,HG03016,HG03048,HG03057,HG03077,HG03082,HG03111,HG03172,HG03228,HG03229,HG03237,HG03241,HG03258,HG03265,HG03376,HG03385,HG03432,HG03478,HG03479,HG03488,HG03515,HG03594,HG03603,HG03607,HG03611,HG03615,HG03624,HG03629,HG03644,HG03645,HG03667,HG03672,HG03684,HG03687,HG03691,HG03697,HG03711,HG03714,HG03716,HG03727,HG03740,HG03745,HG03746,HG03754,HG03757,HG03762,HG03765,HG03770,HG03771,HG03780,HG03784,HG03792,HG03802,HG03803,HG03805,HG03808,HG03814,HG03823,HG03826,HG03833,HG03836,HG03837,HG03846,HG03850,HG03857,HG03858,HG03867,HG03872,HG03873,HG03888,HG03895,HG03897,HG03913,HG03917,HG03925,HG03928,HG03931,HG03934,HG03941,HG03945,HG03947,HG03950,HG03960,HG03963,HG03971,HG03976,HG03985,HG03998,HG04001,HG04003,HG04019,HG04061,HG04062,HG04090,HG04093,HG04094,HG04107,HG04118,HG04140,HG04141,HG04146,HG04152,HG04155,HG04156,HG04159,HG04173,HG04176,HG04183,HG04185,HG04186,HG04195,HG04198,HG04200,HG04202,HG04209,HG04211,HG04212,HG04222,HG04225,HG04227,NA06986,NA06989,NA06994,NA07000,NA07056,NA10851,NA11829,NA11840,NA11843,NA11893,NA11894,NA11933,NA11995,NA12044,NA12058,NA12155,NA12249,NA12272,NA12275,NA12282,NA12286,NA12341,NA12348,NA12414,NA12716,NA12748,NA12750,NA12751,NA12761,NA12763,NA12776,NA12778,NA12872,NA12873,NA12874,NA12878,NA12889,NA18507,NA18543,NA18545,NA18546,NA18549,NA18550,NA18552,NA18553,NA18557,NA18561,NA18564,NA18565,NA18570,NA18571,NA18574,NA18577,NA18579,NA18582,NA18593,NA18596,NA18597,NA18603,NA18608,NA18612,NA18613,NA18616,NA18618,NA18622,NA18623,NA18629,NA18632,NA18633,NA18634,NA18635,NA18637,NA18638,NA18639,NA18641,NA18644,NA18645,NA18646,NA18648,NA18740,NA18747,NA18865,NA18910,NA18917,NA18934,NA18940,NA18946,NA18954,NA18957,NA18961,NA18963,NA18965,NA18966,NA18971,NA18973,NA18974,NA18976,NA18979,NA18982,NA18984,NA18985,NA18986,NA18989,NA18991,NA18992,NA18993,NA18994,NA18995,NA18997,NA19002,NA19003,NA19004,NA19005,NA19012,NA19020,NA19023,NA19038,NA19041,NA19054,NA19055,NA19056,NA19058,NA19059,NA19064,NA19065,NA19066,NA19070,NA19074,NA19075,NA19077,NA19082,NA19083,NA19086,NA19087,NA19089,NA19095,NA19107,NA19119,NA19129,NA19171,NA19172,NA19201,NA19204,NA19316,NA19320,NA19324,NA19338,NA19347,NA19380,NA19383,NA19399,NA19428,NA19429,NA19443,NA19455,NA19456,NA19461,NA19463,NA19648,NA19652,NA19663,NA19670,NA19678,NA19681,NA19716,NA19717,NA19719,NA19741,NA19750,NA19762,NA19764,NA19773,NA19776,NA19782,NA19783,NA19786,NA19794,NA19900,NA19904,NA19913,NA19917,NA20282,NA20291,NA20339,NA20340,NA20412,NA20502,NA20507,NA20516,NA20524,NA20525,NA20528,NA20529,NA20530,NA20531,NA20534,NA20535,NA20540,NA20541,NA20542,NA20586,NA20588,NA20589,NA20754,NA20761,NA20762,NA20765,NA20769,NA20771,NA20778,NA20801,NA20804,NA20807,NA20808,NA20811,NA20812,NA20818,NA20826,NA20846,NA20849,NA20858,NA20862,NA20866,NA20882,NA20894,NA20897,NA20900,NA20901,NA20905,NA20906,NA21087,NA21095,NA21098,NA21104,NA21105,NA21107,NA21108,NA21109,NA21110,NA21115,NA21119,NA21120,NA21130,NA21135,NA21141 dgv92n54 1 7570076 7571996 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545326,nsv545330,nsv545334,nsv545323,nsv545317,nsv545332 M 17421 0 14 CAMTA1 dgv10n67 1 7570223 7571392 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv826586,nsv826697 M 31 2 0 CAMTA1 NA18968,NA18969 dgv93n54 1 7570232 7571071 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545318,nsv545319 M 17421 0 6 CAMTA1 dgv94n54 1 7570232 7571463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545331,nsv545329,nsv545325,nsv545322,nsv545328,nsv545324,nsv545320,nsv545327,nsv545321 M 17421 0 36 CAMTA1 nsv545333 1 7570560 7571463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709633,nssv709632,nssv709636,nssv709635,nssv709634,nssv709637,nssv709639,nssv709638 M 17421 0 8 CAMTA1 nsv545335 1 7570560 7575666 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709642 M 17421 0 1 CAMTA1 nsv826808 1 7570563 7571143 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436326 M 31 1 0 CAMTA1 NA18542 esv2758918 1 7571463 7688059 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756834 M 270 1 0 CAMTA1 NA19152 nsv1116484 1 7571471 7571526 OTHER inversion Alsmadi_et_al_2014 24896259 Sequencing nssv3978665 M 2 0 0 CAMTA1 KWS2 nsv1115335 1 7574000 7580100 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976387 M 2 1 0 CAMTA1 KWS2 esv23816 1 7577658 7579878 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15537 M 40 0 1 CAMTA1 NA18916 esv3310514 1 7579427 7580855 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843513 M 185 1 0 CAMTA1 NA19240 nsv512715 1 7580156 7580459 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625339 M 1 1 0 CAMTA1 1 esv3347816 1 7580205 7580416 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652098 M 185 1 0 CAMTA1 NA19240 nsv1115336 1 7580400 7584600 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976388 M 2 1 0 CAMTA1 KWS2 esv2742139 1 7602525 7602742 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6692748,essv6793270,essv6729606,essv6839960,essv6714230,essv6937666,essv6789137,essv6797436,essv6843873,essv6784984,essv6941770,essv6913988,essv6718809,essv6871704,essv6725840,essv6853218,essv6892308,essv6972319,essv6668926,essv6703853,essv6828991,essv6780854 M 96 0 22 CAMTA1 SSM007,SSM016,SSM022,SSM023,SSM029,SSM031,SSM037,SSM040,SSM043,SSM046,SSM047,SSM068,SSM069,SSM070,SSM071,SSM072,SSM081,SSM084,SSM085,SSM087,SSM091,SSM098 nsv1144347 1 7602633 7602695 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995096 M 2 0 1 CAMTA1 KWS1 esv2742250 1 7608346 7608668 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6789138 M 96 0 1 CAMTA1 SSM070 esv2742361 1 7608482 7609151 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6824968,essv6929048,essv6813160,essv6729607,essv6950537,essv6686147,essv6748187,essv6972320,essv6961538,essv6954724,essv6668927,essv6703856,essv6703855 M 96 0 12 CAMTA1 SSM008,SSM020,SSM025,SSM026,SSM027,SSM029,SSM031,SSM035,SSM040,SSM047,SSM077,SSM080 esv2742472 1 7608526 7608680 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6729607 M 96 0 1 CAMTA1 SSM047 esv2742583 1 7608579 7608893 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6813160,essv6824968,essv6972320,essv6954724,essv6668927,essv6703855,essv6961538 M 96 0 7 CAMTA1 SSM026,SSM027,SSM029,SSM031,SSM040,SSM077,SSM080 esv2659209 1 7608707 7608988 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5598963,essv6171580,essv5767932,essv6381961,essv5552184,essv5945474,essv5596229,essv5974689,essv5484759,essv5833833,essv5408562,essv6483714,essv5734717,essv6425308,essv5463301,essv6560388,essv5424543,essv6197629,essv5606710,essv6448015,essv5712548,essv6449723,essv5467230,essv6508398,essv5706883,essv6454559,essv5758254,essv6456482,essv5731775,essv6227062,essv5621963,essv6292677,essv5420525,essv6296113,essv5502203,essv5859553,essv5706547,essv6011559,essv5425830,essv6521117,essv5479911,essv6307472,essv6023491,essv6202094,essv5780800,essv6332746,essv6047007,essv5869401,essv6177373,essv6491493,essv6082159,essv6002095,essv6181882,essv5843249,essv5922415,essv6363270,essv6364686,essv6209120,essv5867425,essv5969456,essv6046646,essv5830392,essv5818796,essv6370362,essv6259671,essv6481233,essv5777606,essv6308050,essv6134379,essv5897976,essv6172097 M 1151 0 71 CAMTA1 HG00111,HG00125,HG00154,HG00265,HG00277,HG00313,HG00319,HG00321,HG00323,HG00330,HG00342,HG00345,HG00369,HG00418,HG00427,HG00463,HG00475,HG00500,HG00512,HG00524,HG00534,HG00581,HG00589,HG00654,HG00657,HG00662,HG00671,HG00699,HG00701,HG00707,HG00708,HG01051,HG01052,HG01061,HG01067,HG01069,HG01070,HG01072,HG01079,HG01082,HG01102,HG01112,HG01251,HG01334,HG01354,HG01389,HG01437,HG01518,NA12829,NA12889,NA18530,NA18559,NA18563,NA18564,NA18595,NA18597,NA18602,NA18610,NA18635,NA18949,NA18956,NA19327,NA19663,NA19707,NA19731,NA19758,NA19762,NA19773,NA19785,NA19786,NA20299 esv3541455 1 7608713 7608994 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9740202 M 767 0 1 CAMTA1 esv993163 1 7608732 7608958 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579404 M 3 0 1 CAMTA1 HuRef esv2742694 1 7608735 7609087 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6929048,essv6950537,essv6686147,essv6972320,essv6954724,essv6668927,essv6703856,essv6961538 M 96 0 8 CAMTA1 SSM020,SSM025,SSM026,SSM027,SSM029,SSM031,SSM035,SSM040 esv1611358 1 7608740 7608967 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3860626 M 2 0 1 CAMTA1 HuRef esv2742806 1 7608742 7608969 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6686147,essv6972320,essv6954724,essv6668927,essv6961538 M 96 0 5 CAMTA1 SSM026,SSM027,SSM029,SSM031,SSM035 nsv955214 1 7609601 7749000 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001711 M 1 0 1 CAMTA1 BILGI_BIOE nsv1011512 1 7622453 7666975 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696765 M 29084 0 1 CAMTA1 dgv35e59 1 7627565 7630163 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3352384,esv3413631,esv3418027 M 185 3 0 CAMTA1 NA19238,NA19239,NA19240 nsv1153206 1 7627599 7630000 CNV duplication John_et_al_2014 26484159 Sequencing nssv4001123 M 1 1 0 CAMTA1 KWB1 nsv1124559 1 7628000 7629900 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976613 M 2 1 0 CAMTA1 KWS2 nsv1076313 1 7628199 7629700 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3769725 M 1 1 0 CAMTA1 KWP1 esv2764250 1 7630724 7635207 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004919,essv7004920 M 1109 0 2 CAMTA1 RW_0530,RW_0546 nsv520077 1 7637979 7644802 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697212 M 2026 0 1 CAMTA1 esv3585127 1 7645725 7648453 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847480,essv9847479,essv9847478,essv9847477,essv9847482,essv9847481,essv9847487,essv9847483,essv9847486,essv9847485,essv9847484,essv9847490,essv9847488,essv9847489,essv9847491,essv9847492 M 2504 0 16 CAMTA1 HG01247,HG01894,HG02433,HG02450,HG02485,HG02546,HG03136,NA19026,NA19035,NA19093,NA19374,NA19383,NA19399,NA19456,NA19916,NA20346 esv2672475 1 7645754 7648432 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6336025,essv5833909,essv6269373,essv6057115,essv5955720 M 1151 0 5 CAMTA1 NA19093,NA19374,NA19383,NA19399,NA19916 nsv1132279 1 7662300 7664800 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3987046 M 2 1 0 CAMTA1 KWS1 dgv36e59 1 7714465 7715963 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3418679,esv3350641 M 185 2 0 CAMTA1 NA19239,NA19240 esv8105 1 7714607 7715690 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30546 M 1 0 0 CAMTA1 nsv1125168 1 7714969 7715026 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3977973 M 2 1 0 CAMTA1 KWS2 nsv1129456 1 7715013 7715115 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3962910 M 2 0 0 CAMTA1 KWS1 esv1977744 1 7715032 7715386 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4674847 M 1 0 1 CAMTA1 NA18507 nsv1137208 1 7715148 7715308 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3975900 M 2 0 1 CAMTA1 KWS1 esv3585129 1 7740841 7743843 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847514,essv9847513,essv9847515,essv9847516 M 2504 0 4 CAMTA1 HG03681,HG03941,NA20847,NA21127 esv28595 1 7763029 7765558 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13845 M 40 1 0 CAMTA1 NA06985 nsv545336 1 7763214 7765454 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709643 M 17421 0 1 CAMTA1 nsv1121746 1 7763900 7765000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968395 M 2 0 1 CAMTA1 KWS2 nsv953452 1 7764001 7767500 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001723 M 1 0 1 CAMTA1 BILGI_BIOE nsv1075535 1 7764099 7766100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771179 M 1 0 1 CAMTA1 KWP1 esv3418854 1 7792078 7792089 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863673 M 185 1 0 CAMTA1 NA12005 esv3585130 1 7803121 7804431 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847519,essv9847518,essv9847517,essv9847522,essv9847520,essv9847527,essv9847521,essv9847523,essv9847526,essv9847525,essv9847524 M 2504 0 11 CAMTA1 HG01170,HG02610,HG03112,HG03127,NA19159,NA19198,NA19332,NA19435,NA19466,NA19703,NA20127 esv2671025 1 7803173 7804451 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6423324,essv5844959,essv6542419,essv5719957,essv5838521 M 1151 0 5 CAMTA1 HG01170,NA19332,NA19435,NA19466,NA19703 nsv1121747 1 7843000 7844500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968396 M 2 0 1 "" KWS2 nsv1075537 1 7843499 7844500 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771027 M 1 0 1 "" KWP1 nsv1143433 1 7843600 7844500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980631 M 2 0 1 "" KWS1 nsv161033 1 7856397 7864940 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179611 M 24 PER3 esv2742917 1 7889475 7890364 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6832588,essv6824969,essv6961539,essv6902520,essv6941771,essv6933296,essv6813161,essv6876643,essv6846996,essv6821169,essv6929049,essv6967916,essv6789139,essv6776926,essv6807362,essv6710571,essv6729608,essv6839961,essv6718157,essv6950538,essv6784476,essv6797437,essv6793271,essv6843874,essv6748198,essv6780856,essv6916584,essv6910030,essv6913989,essv6725841,essv6769507,essv6853219,essv6773425,essv6816632,essv6972321,essv6692749,essv6895839,essv6868702,essv6950117,essv6892309,essv6766531,essv6668928,essv6871705,essv6937667,essv6721994,essv6954725,essv6675191,essv6828992,essv6925679,essv6874692,essv6707254,essv6679152,essv6801611,essv6917412 M 96 0 54 PER3 SSM003,SSM004,SSM008,SSM009,SSM010,SSM012,SSM013,SSM015,SSM016,SSM017,SSM019,SSM020,SSM021,SSM022,SSM023,SSM025,SSM026,SSM027,SSM028,SSM029,SSM031,SSM032,SSM033,SSM037,SSM041,SSM042,SSM044,SSM045,SSM046,SSM047,SSM064,SSM065,SSM066,SSM067,SSM068,SSM070,SSM071,SSM072,SSM073,SSM075,SSM077,SSM079,SSM080,SSM081,SSM082,SSM084,SSM085,SSM086,SSM087,SSM090,SSM091,SSM092,SSM098,SSM099 esv2743028 1 7889939 7890032 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961539 M 96 0 1 PER3 SSM027 esv991458 1 7889987 7890040 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570335 M 3 0 1 PER3 HuRef nsv477904 1 7898709 7898709 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016187 M 9 1 0 PER3 NA18517 esv2660700 1 7908752 7909494 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5452478 M 1151 0 1 UTS2 HG00310 esv3585131 1 7908795 7909513 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847530,essv9847529,essv9847528,essv9847531,essv9847532 M 2504 0 5 UTS2 HG00310,HG01705,HG02224,NA21098,NA21128 esv3451111 1 7916677 7916677 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701371 M 185 1 0 "" NA12878 esv3585132 1 7921468 7952768 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847533 M 2504 1 0 "" NA18941 esv3567897 1 7921952 7959991 CNV gain Uddin_et_al_2014 25503493 SNP array essv9789644 M 873 1 0 "" 400411TG esv2743139 1 7922901 7923112 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6946481,essv6692750 M 96 0 2 "" SSM024,SSM037 esv2989084 1 7923036 7923115 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7258651 M 1 0 1 "" HuRef esv1585189 1 7923049 7923109 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3804508 M 2 0 1 "" HuRef esv9095 1 7924866 7925645 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31536 M 1 0 0 "" esv5046 1 7924934 7925672 CNV loss Wang_et_al_2008 18987735 Sequencing essv27487 M 1 0 1 "" YH nsv160721 1 7924937 7925384 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179299 M 24 "" esv2666092 1 7924945 7925336 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5452962,essv6590580,essv5818900,essv5956820,essv5749682,essv6588926,essv5580851,essv6488901,essv5463498,essv6232486,essv5774770,essv6393424,essv5738581,essv6397283,essv5623821,essv6171239,essv5739240,essv6266602,essv5706376,essv6287297,essv5787385,essv6561835,essv5887726,essv6071672,essv5545435,essv5969046,essv5481507,essv6410868,essv5769304,essv6126445,essv5675803,essv6087682,essv5609501,essv6082818,essv5535767,essv6125308,essv5557584,essv6555651,essv5749862,essv6280524,essv5866722,essv6051596,essv5662041,essv6549133,essv5732882,essv6591211,essv5446050,essv6171633,essv5412831,essv6430122,essv5731566,essv6431536,essv5620420,essv6432049,essv5533668,essv6586392,essv5604893,essv5937051,essv5849787,essv6443466,essv5645969,essv6035737,essv5714806,essv6049443,essv5820660,essv6480407,essv5741919,essv6574163,essv5770734,essv6262983,essv5438546,essv5916279,essv5605737,essv6237111,essv5833541,essv6152229,essv5782284,essv6071488,essv5406419,essv6456380,essv5865517,essv6293654,essv5868308,essv6510402,essv5476783,essv6274257,essv5482282,essv5981820,essv5823164,essv6112075,essv5433918,essv6543789,essv5686994,essv6017867,essv5828338,essv6543548,essv5522498,essv6118058,essv5857566,essv6132482,essv5663920,essv6081705,essv5529064,essv6026868,essv5628583,essv6311558,essv5783009,essv6243959,essv5553418,essv6068574,essv5785920,essv6537226,essv5612438,essv6247186,essv5768657,essv6077919,essv5812895,essv6320462,essv5448321,essv6054870,essv5481799,essv6563493,essv5742128,essv6265135,essv5504634,essv6148849,essv5763197,essv6103553,essv5755871,essv6271673,essv5618733,essv5961735,essv5431965,essv6492955,essv5605498,essv6337729,essv5451346,essv5909595,essv5487791,essv6548934,essv5792118,essv6271034,essv5463023,essv5944620,essv5669965,essv6048322,essv5419681,essv6195881,essv5514785,essv6163458,essv5603289,essv6500087,essv5630473,essv6002534,essv5764081,essv6179194,essv5644539,essv6132893,essv5568558,essv5902168,essv5477186,essv6023986,essv5529811,essv6340838,essv5700534,essv6290565,essv5514645,essv6596517,essv5500862,essv6465980,essv5523146,essv6217184,essv5601098,essv6459955,essv5675700,essv6260868,essv5853694,essv6595168,essv5827539,essv6489640,essv5825612,essv6077397,essv5867074,essv6069827,essv5651255,essv5945998,essv5703301,essv6071609,essv5592926,essv6185869,essv5757180,essv6533523,essv5798382,essv6356675,essv5604664,essv6358896,essv5578543,essv6019104,essv5696355,essv6571214,essv5809859,essv6257924,essv5895385,essv6155420,essv5790466,essv6281345,essv6362683,essv6363300,essv6080098,essv6536918,essv6125274,essv6285255,essv6126415,essv6018911,essv6048485,essv6018318,essv6371896,essv6373175,essv5958114,essv6594272,essv6067271,essv6094165,essv6532343,essv6493965,essv5979087,essv5942016,essv6538912,essv6380029,essv6380499,essv6502651,essv6203039,essv6483548 M 1151 0 232 "" HG00108,HG00111,HG00125,HG00154,HG00158,HG00177,HG00236,HG00237,HG00246,HG00249,HG00251,HG00253,HG00257,HG00263,HG00267,HG00271,HG00273,HG00275,HG00276,HG00277,HG00278,HG00281,HG00284,HG00309,HG00315,HG00319,HG00326,HG00328,HG00329,HG00330,HG00331,HG00334,HG00337,HG00339,HG00342,HG00345,HG00346,HG00369,HG00375,HG00403,HG00404,HG00418,HG00419,HG00421,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00531,HG00533,HG00534,HG00536,HG00537,HG00543,HG00556,HG00557,HG00559,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00595,HG00607,HG00608,HG00610,HG00613,HG00614,HG00619,HG00620,HG00626,HG00628,HG00638,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00701,HG00702,HG00704,HG00705,HG00707,HG00740,HG01051,HG01052,HG01061,HG01069,HG01072,HG01073,HG01101,HG01102,HG01107,HG01124,HG01125,HG01133,HG01134,HG01136,HG01148,HG01149,HG01171,HG01173,HG01174,HG01187,HG01342,HG01351,HG01354,HG01366,HG01383,HG01390,HG01440,HG01462,HG01491,HG01492,NA12546,NA18530,NA18532,NA18536,NA18542,NA18543,NA18544,NA18546,NA18548,NA18549,NA18550,NA18557,NA18559,NA18560,NA18561,NA18562,NA18567,NA18574,NA18576,NA18577,NA18592,NA18595,NA18596,NA18597,NA18599,NA18602,NA18606,NA18610,NA18612,NA18613,NA18614,NA18615,NA18616,NA18619,NA18620,NA18621,NA18623,NA18624,NA18626,NA18627,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18868,NA18941,NA18963,NA18977,NA18984,NA18985,NA18987,NA18990,NA18999,NA19002,NA19007,NA19062,NA19072,NA19075,NA19076,NA19077,NA19080,NA19082,NA19084,NA19085,NA19088,NA19130,NA19312,NA19359,NA19391,NA19396,NA19445,NA19446,NA19455,NA19663,NA19664,NA19681,NA19682,NA19685,NA19716,NA19717,NA19720,NA19723,NA19788,NA19818 esv29691 1 7924952 7925557 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10705 M 40 0 4 "" NA12004,NA12749,NA18502,NA18858 nsv821110 1 7924952 7925557 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420957 M 1 0 1 "" NA10851 esv2743250 1 7924995 7925521 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6832589,essv6780857,essv6902521,essv6941772,essv6906091,essv6824970,essv6682817,essv6821170,essv6883250,essv6710572,essv6843765,essv6789140,essv6929050,essv6742127,essv6776927,essv6756541,essv6807363,essv6729610,essv6950539,essv6885977,essv6718158,essv6797438,essv6843875,essv6669132,essv6967918,essv6725842,essv6913990,essv6748209,essv6888996,essv6853221,essv6910031,essv6773426,essv6816643,essv6895840,essv6972322,essv6937668,essv6868703,essv6761845,essv6804395,essv6892311,essv6950128,essv6666886,essv6721995,essv6679153,essv6668929,essv6898603,essv6793272,essv6954726,essv6695587,essv6863944,essv6707255,essv6874693,essv6747764,essv6917413 M 96 0 54 "" SSM004,SSM005,SSM006,SSM008,SSM010,SSM011,SSM013,SSM014,SSM015,SSM016,SSM017,SSM020,SSM022,SSM023,SSM025,SSM026,SSM028,SSM029,SSM030,SSM031,SSM033,SSM034,SSM041,SSM042,SSM044,SSM045,SSM046,SSM047,SSM053,SSM056,SSM059,SSM062,SSM066,SSM067,SSM068,SSM070,SSM071,SSM072,SSM074,SSM075,SSM079,SSM080,SSM082,SSM085,SSM087,SSM089,SSM090,SSM092,SSM095,SSM096,SSM097,SSM098,SSM099,SSM100 nsv1145317 1 7936824 7936885 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982410 M 2 0 1 "" KWS1 esv2743361 1 7962923 7963335 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6669143,essv6846997,essv6902522,essv6789141,essv6699590,essv6883251,essv6780858,essv6821171,essv6937669,essv6696982,essv6929051,essv6859175,essv6913991,essv6686148,essv6725844,essv6972323,essv6816572,essv6888997,essv6853222,essv6773427,essv6675192,essv6692751,essv6941774,essv6898604,essv6954727,essv6721996,essv6695599,essv6707256,essv6925680,essv6759030 M 96 0 30 "" SSM005,SSM006,SSM013,SSM016,SSM019,SSM020,SSM022,SSM023,SSM026,SSM029,SSM032,SSM035,SSM037,SSM038,SSM039,SSM041,SSM045,SSM046,SSM061,SSM066,SSM068,SSM070,SSM078,SSM079,SSM086,SSM087,SSM088,SSM095,SSM097,SSM100 esv3541677 1 7963106 7963394 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9740424 M 767 0 1 "" nsv954686 1 7963167 7963401 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000470 M 1 0 1 "" BILGI_BIOE dgv4e201 1 7963169 7963334 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2740756,esv2743441 M 96 0 2 "" SSM031,SSM089 dgv5e201 1 7963169 7963486 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2740757,esv2743430,esv2741890,esv2741974,esv2742007 M 96 0 6 "" SSM031,SSM072,SSM075,SSM076,SSM080,SSM089 esv3302892 1 7973195 7973542 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7736127 M 185 0 0 "" NA19093 nsv1075541 1 7974099 7974500 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767494 M 1 0 1 "" KWP1 esv3585133 1 7975281 7978202 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847534 M 2504 0 1 TNFRSF9 HG01531 esv2678721 1 7975392 7978304 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5580510 M 1151 0 1 TNFRSF9 HG00159 esv2743452 1 8002070 8002379 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6941775 M 96 0 1 TNFRSF9 SSM023 nsv1521 1 8014239 8047493 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2406 M 9 1 0 PARK7 NA18555 nsv1144348 1 8048222 8048287 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995097 M 2 0 1 "" KWS1 nsv1075124 1 8048251 8048318 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772577 M 1 0 1 "" KWP1 nsv1137724 1 8048524 8048591 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969375,nssv3995098 M 2 0 2 "" KWS1,KWS2 esv2403277 1 8050410 8050769 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4650492 M 1 0 1 "" NA18507 esv6796 1 8086889 8087063 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29237 M 1 0 0 "" esv3585135 1 8095411 8103255 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847537 M 2504 0 1 "" HG02323 nsv1076074 1 8105038 8105102 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767844 M 1 0 1 "" KWP1 esv3585136 1 8110264 8113874 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847538,essv9847539 M 2504 0 2 "" HG02332,NA19307 nsv945757 1 8117076 8123756 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751015,nssv1750995,nssv1750940,nssv1751013,nssv1751021,nssv1751009,nssv1750943,nssv1750985,nssv1751019,nssv1750967,nssv1750951,nssv1751000,nssv1750966,nssv1750999,nssv1751022,nssv1750988,nssv1750959,nssv1750973,nssv1750950,nssv1750980,nssv1750952,nssv1752570,nssv1751017,nssv1750983,nssv1750939,nssv1752571,nssv1751020,nssv1752572,nssv1750968,nssv1750976,nssv1750961,nssv1751025,nssv1750942,nssv1751004,nssv1750944,nssv1751026,nssv1751018,nssv1751002,nssv1750958,nssv1752568,nssv1750953,nssv1750992,nssv1750946,nssv1750970,nssv1750947,nssv1750963,nssv1750948,nssv1750971,nssv1750941,nssv1750993,nssv1750949,nssv1751011,nssv1751023,nssv1750990,nssv1751016,nssv1750986,nssv1750945,nssv1750981,nssv1750965,nssv1751007,nssv1750957,nssv1751012,nssv1750955,nssv1751003,nssv1750954,nssv1750962,nssv1750938,nssv1750937,nssv1750956,nssv1751001,nssv1751014,nssv1750996,nssv1750960,nssv1750998,nssv1750969,nssv1750982,nssv1750994,nssv1752573,nssv1750991,nssv1750975,nssv1752569,nssv1750984,nssv1750977,nssv1750978,nssv1750974,nssv1751010,nssv1751005,nssv1750989,nssv1751008,nssv1751027,nssv1751006,nssv1750964,nssv1750979,nssv1750972,nssv1750997,nssv1751024,nssv1750987 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1014727 1 8119262 8375913 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478359 M 29084 1 0 "" nsv528132 1 8145294 8147157 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704677 M 2026 0 1 "" esv2661294 1 8147356 8147708 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5647987,essv5434164 M 1151 0 2 "" HG00512,HG00524 nsv1077035 1 8149406 8149462 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764428 M 1 0 1 "" KWP1 dgv32n106 1 8149407 8149463 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1144349,nsv1122291 M 2 0 2 "" KWS1,KWS2 nsv1133805 1 8163713 8163770 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995100,nssv3990231 M 2 0 2 "" KWS1,KWS2 nsv1145318 1 8163984 8164040 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982411 M 2 0 1 "" KWS1 esv3585137 1 8164787 8186286 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847541,essv9847540 M 2504 2 0 "" NA20882,NA20900 esv3585138 1 8166041 8207035 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847543,essv9847542 M 2504 2 0 "" NA20882,NA20900 esv2764230 1 8173369 8189285 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004937,essv7004924,essv7004928,essv7004926,essv7004932,essv7004925,essv7004935,essv7004931,essv7004939,essv7004927,essv7004921,essv7004938,essv7004930,essv7004929,essv7004934,essv7004940,essv7004923,essv7004936 M 1109 0 18 "" RW_0013,RW_0043,RW_0049,RW_0098,RW_0118,RW_0129,RW_0155,RW_0162,RW_0174,RW_0190,RW_0220,RW_0229,RW_0234,RW_0253,RW_0552,RW_0619,RW_0626,RW_0634 nsv1160951 1 8176626 8191792 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nssv4027767 M 369 0 1 "" esv3585139 1 8182402 8190870 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847544,essv9847561,essv9847546,essv9847551,essv9847545,essv9847560,essv9847550,essv9847547,essv9847548,essv9847549,essv9847554,essv9847552,essv9847559,essv9847553,essv9847555,essv9847558,essv9847557,essv9847556,essv9847563,essv9847576,essv9847567,essv9847562,essv9847566,essv9847565,essv9847564,essv9847568,essv9847570,essv9847575,essv9847569,essv9847574,essv9847571,essv9847573,essv9847572,essv9847578,essv9847583,essv9847577,essv9847582,essv9847579,essv9847580,essv9847581,essv9847584,essv9847586,essv9847585,essv9847587 M 2504 0 44 "" HG01058,HG01883,HG01889,HG02318,HG02502,HG02536,HG02583,HG02585,HG02642,HG02756,HG02798,HG02805,HG02854,HG02884,HG02923,HG02941,HG03063,HG03064,HG03124,HG03132,HG03160,HG03172,HG03212,HG03439,NA18876,NA18933,NA19035,NA19107,NA19108,NA19153,NA19204,NA19207,NA19213,NA19318,NA19321,NA19374,NA19403,NA19437,NA19471,NA19472,NA19664,NA19701,NA19704,NA20296 esv2672911 1 8182406 8190875 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6042179,essv6383717,essv5663474,essv6161910,essv5471431,essv5603109,essv5795918,essv5851511,essv5467236 M 1151 0 9 "" NA19107,NA19213,NA19373,NA19437,NA19471,NA19472,NA19664,NA19701,NA19704 esv25059 1 8182444 8191375 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14504 M 40 0 2 "" NA07045,NA19108 esv2421513 1 8182462 8189854 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5113994,essv5031289,essv5073414,essv5021464,essv5022989,essv5114664,essv5080397,essv5015810,essv5142796,essv5120988,essv5019834,essv5078502,essv5120024,essv5147348,essv5012227,essv5088579,essv5142988,essv5053733,essv5053091,essv5107816,essv5075870,essv5159857,essv5143136,essv5038470,essv5141409,essv5115860,essv5028046,essv5009796,essv5016176,essv5037691,essv5146224,essv5154659,essv5132727,essv5003208,essv5071617,essv5014120,essv5005423,essv5060745,essv5022164 M 1184 0 39 "" NA06997,NA07045,NA18933,NA19035,NA19107,NA19108,NA19109,NA19127,NA19153,NA19154,NA19204,NA19207,NA19213,NA19215,NA19313,NA19318,NA19321,NA19352,NA19373,NA19374,NA19403,NA19437,NA19471,NA19472,NA19664,NA19701,NA19702,NA19704,NA19915,NA20288,NA20297,NA20343,NA20347,NA20363,NA21295,NA21317,NA21424,NA21580,NA21596 nsv442907 1 8182584 8189285 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617669,nssv1617691,nssv1617658,nssv1617702,nssv1617680,nssv1617647 M 270 0 6 "" NA19127,NA19153,NA19154,NA19204,NA19205,NA19207 esv3585140 1 8185308 8186282 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847596,essv9847595,essv9847594,essv9847593,essv9847592,essv9847591,essv9847590,essv9847588,essv9847589,essv9847608,essv9847607,essv9847602,essv9847597,essv9847601,essv9847599,essv9847598,essv9847600,essv9847603,essv9847606,essv9847605,essv9847604,essv9847610,essv9847615,essv9847609,essv9847614,essv9847611,essv9847613,essv9847612,essv9847617,essv9847616 M 2504 0 30 "" HG01883,HG01889,HG02318,HG02502,HG02583,HG02585,HG02642,HG02756,HG02798,HG02854,HG02941,HG03063,HG03064,HG03124,HG03132,HG03160,HG03172,HG03212,HG03439,NA18876,NA19107,NA19204,NA19213,NA19318,NA19374,NA19403,NA19437,NA19471,NA19472,NA19704 esv2660395 1 8185330 8186291 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5581631 M 1151 0 1 "" NA18534 nsv545337 1 8200690 8210935 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709644 M 17421 1 0 "" esv3585141 1 8200707 8211256 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847625,essv9847658,essv9847624,essv9847618,essv9847623,essv9847622,essv9847619,essv9847621,essv9847620,essv9847626,essv9847631,essv9847657,essv9847640,essv9847627,essv9847630,essv9847629,essv9847628,essv9847634,essv9847639,essv9847633,essv9847632,essv9847638,essv9847635,essv9847637,essv9847636,essv9847642,essv9847656,essv9847647,essv9847641,essv9847646,essv9847643,essv9847645,essv9847644,essv9847650,essv9847655,essv9847649,essv9847648,essv9847654,essv9847651,essv9847653,essv9847652 M 2504 41 0 "" HG00096,HG00102,HG00139,HG00179,HG00185,HG00239,HG00267,HG00306,HG00323,HG00330,HG00334,HG00378,HG00380,HG01080,HG01102,HG01188,HG01325,HG01384,HG01403,HG01612,HG01669,HG01680,HG01988,HG02337,HG03826,HG03888,NA10847,NA11831,NA11840,NA11931,NA12004,NA12043,NA12760,NA12778,NA12830,NA18962,NA20502,NA20507,NA20510,NA20900,NA21101 esv2763847 1 8202357 8209321 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7031412,essv7030856,essv7031301,essv7031190,essv7031078,essv7030967 M 1109 6 0 "" SW_0568,SW_1045,SW_1057,SW_1111,SW_1127,SW_1166 nsv831870 1 8203407 8354157 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442595,nssv1442641,nssv1442606,nssv1442617,nssv1442652,nssv1442630 M 95 0 6 "" esv22301 1 8204084 8211127 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10444 M 40 3 0 "" NA11931,NA12004,NA12239 dgv95n54 1 8204719 8211074 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545339,nsv545338,nsv545340 M 17421 4 0 "" nsv441679 1 8206130 8209321 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656568,nssv1656569,nssv1656570,nssv1656575,nssv1656576,nssv1656573,nssv1656577,nssv1656578,nssv1656574,nssv1656580,nssv1656579,nssv1656571,nssv1656572 M 270 13 0 "" NA07019,NA07022,NA10854,NA10857,NA11831,NA11840,NA12004,NA12043,NA12146,NA12155,NA12236,NA12239,NA12752 esv23800 1 8216828 8240818 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15760 M 40 1 0 "" NA12156 nsv545341 1 8217087 8225581 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709649 M 17421 1 0 "" nsv545342 1 8217087 8230180 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709650 M 17421 1 0 "" esv3541900 1 8217954 8218023 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9740647 M 767 0 1 "" nsv545343 1 8223832 8275284 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709651 M 17421 0 1 "" nsv1632 1 8238409 8283574 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7290 M 9 0 1 "" NA12156 esv2673013 1 8247755 8250065 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5459203,essv6386418,essv5590716,essv6532958,essv5869405,essv6425063,essv6455515,essv6127302,essv6250393,essv6234149,essv6226674 M 1151 0 11 "" HG01107,NA18505,NA19107,NA19213,NA19373,NA19374,NA19437,NA19452,NA19471,NA19472,NA19704 esv3585142 1 8247757 8250067 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847672,essv9847663,essv9847689,essv9847662,essv9847661,essv9847660,essv9847659,essv9847666,essv9847671,essv9847665,essv9847664,essv9847670,essv9847667,essv9847669,essv9847668,essv9847679,essv9847674,essv9847688,essv9847673,essv9847678,essv9847675,essv9847677,essv9847676,essv9847682,essv9847687,essv9847681,essv9847680,essv9847686,essv9847683,essv9847685,essv9847684,essv9847695,essv9847691,essv9847690,essv9847694,essv9847693,essv9847692,essv9847698,essv9847697,essv9847696,essv9847699,essv9847701,essv9847700 M 2504 0 43 "" HG00742,HG01107,HG01883,HG01889,HG01988,HG02334,HG02429,HG02479,HG02481,HG02536,HG02573,HG02667,HG02895,HG02941,HG02971,HG03049,HG03054,HG03063,HG03095,HG03123,HG03132,HG03157,HG03168,HG03172,HG03352,HG03439,NA18505,NA18924,NA18933,NA18934,NA19035,NA19107,NA19152,NA19209,NA19213,NA19318,NA19374,NA19403,NA19437,NA19452,NA19471,NA19472,NA19704 esv3542011 1 8252849 8252985 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9740758 M 767 0 1 "" esv2676421 1 8283371 8284817 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6498094,essv6198697,essv6406057,essv5884882,essv6534122,essv5704499,essv6575204,essv5636477,essv6426066,essv5779092,essv6544502,essv5545977,essv6264533,essv5850095,essv6210977,essv5495917,essv6489753,essv5754571,essv6218567,essv5429899,essv6358608,essv5865835,essv6274360,essv5753462,essv6240205,essv6150189,essv6375769,essv5900225,essv6512348,essv5780250,essv6464576,essv5510957,essv5904040,essv5687952,essv5412219 M 1151 0 35 "" HG00119,HG00246,HG00275,HG00277,HG00328,HG00513,HG00537,HG00580,HG00613,HG00619,HG00657,HG01060,HG01061,HG01070,HG01171,HG01334,HG01375,NA06989,NA12058,NA18612,NA18910,NA18988,NA19004,NA19058,NA19062,NA19067,NA19070,NA19072,NA19347,NA19684,NA19685,NA19703,NA19719,NA19783,NA20581 esv3585143 1 8283918 8289540 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847702 M 2504 0 1 "" HG02053 nsv1012977 1 8312582 8545270 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3696766 M 29084 0 1 RERE,SLC45A1 nsv1133806 1 8322208 8322265 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969376 M 2 0 1 "" KWS2 nsv1126974 1 8326142 8326213 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985262 M 2 0 1 "" KWS1 esv1547514 1 8336937 8336937 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3685454 M 2 1 0 "" HuRef esv2658784 1 8338181 8338947 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5974633 M 1151 0 1 "" NA19371 esv3585144 1 8338196 8338929 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847703 M 2504 0 1 "" NA19454 esv3585145 1 8360182 8364098 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9847723,essv9847722,essv9847721,essv9847704,essv9847720,essv9847711,essv9847706,essv9847705,essv9847710,essv9847707,essv9847709,essv9847708,essv9847714,essv9847719,essv9847712,essv9847713,essv9847715,essv9847718,essv9847717,essv9847716,essv9847727,essv9847724,essv9847736,essv9847726,essv9847725,essv9847753,essv9847730,essv9847728,essv9847735,essv9847729,essv9847731,essv9847734,essv9847733,essv9847732,essv9847743,essv9847738,essv9847752,essv9847737,essv9847742,essv9847739,essv9847741,essv9847740,essv9847751,essv9847746,essv9847745,essv9847744,essv9847750,essv9847747,essv9847749,essv9847748,essv9847754,essv9847768,essv9847759,essv9847755,essv9847758,essv9847757,essv9847756,essv9847767,essv9847762,essv9847761,essv9847760,essv9847763,essv9847766,essv9847765,essv9847764,essv9847775,essv9847770,essv9847769,essv9847774,essv9847771,essv9847773,essv9847772,essv9847776,essv9847777 M 2504 0 74 "" HG00625,HG01048,HG01098,HG01101,HG01121,HG01148,HG01149,HG01177,HG01257,HG01272,HG01323,HG01351,HG01360,HG01362,HG01390,HG01395,HG01413,HG01447,HG01492,HG01494,HG01556,HG01572,HG01577,HG01892,HG01918,HG01924,HG01936,HG01938,HG01939,HG01941,HG01948,HG01950,HG01951,HG01953,HG01954,HG01973,HG01977,HG01979,HG01982,HG01992,HG01997,HG02002,HG02090,HG02102,HG02104,HG02146,HG02150,HG02252,HG02266,HG02275,HG02277,HG02278,HG02291,HG02298,HG02304,HG02345,HG03234,NA18948,NA18954,NA18978,NA19657,NA19664,NA19681,NA19682,NA19717,NA19722,NA19726,NA19732,NA19740,NA19752,NA19762,NA19770,NA20274,NA20314 esv2663055 1 8360239 8364039 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5463476,essv5890810,essv5642347,essv6407017,essv5646640,essv5914197,essv5544793,essv6093244,essv5770868,essv5936414,essv6284524,essv5940148,essv5868670,essv6503910,essv6571256,essv5975382,essv6593461 M 1151 0 17 "" HG01048,HG01101,HG01148,HG01149,HG01351,HG01390,HG01492,HG01494,NA18948,NA19657,NA19664,NA19681,NA19682,NA19717,NA19722,NA19726,NA19732 nsv947411 1 8360755 8373234 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762787 M 97 0 1 "" HGDP00998 esv2743463 1 8361234 8361818 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6876654,essv6759032,essv6846999,essv6756542,essv6679156,essv6895841,essv6668934,essv6733473,essv6863946,essv6874694 M 96 0 10 "" SSM012,SSM031,SSM033,SSM049,SSM059,SSM061,SSM086,SSM089,SSM092,SSM099 esv2743475 1 8361352 8361590 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6895841,essv6668934 M 96 0 2 "" SSM031,SSM099 esv2743486 1 8361491 8361570 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6863946 M 96 0 1 "" SSM089 nsv1150714 1 8373337 8373401 CNV insertion John_et_al_2014 26484159 Sequencing nssv3996190 M 1 1 0 "" KWB1 nsv1743 1 8377753 8411716 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3033 M 9 1 0 SLC45A1 NA18555 nsv512716 1 8381685 8382557 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625340 M 1 1 0 "" 1 esv2601359 1 8381817 8382614 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5225689 M 1 1 0 "" NA18507 nsv516827 1 8390888 8423510 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv693483,nssv693424,nssv685632,nssv657128,nssv671511,nssv679037,nssv684816,nssv654276,nssv656941 M 2026 0 9 RERE,SLC45A1 esv1250756 1 8391507 8391507 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4006791 M 2 1 0 SLC45A1 HuRef esv2624373 1 8404405 8405339 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5304328 M 1 1 0 "" NA18507 dgv33n106 1 8404851 8404951 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1129457,nsv1125454 M 2 0 0 "" KWS1,KWS2 nsv1137725 1 8404882 8404952 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990232 M 2 0 1 "" KWS2 esv1162151 1 8404955 8404955 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4276612 M 2 1 0 "" HuRef nsv545344 1 8415521 8434000 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709652 M 17421 0 1 RERE nsv819494 1 8416148 8421431 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419699 M 2 1 0 RERE AK1 esv990980 1 8435579 8435579 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583268 M 3 1 0 RERE HuRef esv3404682 1 8446618 8446637 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593546,essv9593558,essv9593502,essv9593569,essv9593513,essv9593524,essv9593580,essv9593591,essv9593535 M 185 9 0 RERE NA11931,NA12249,NA12287,NA12812,NA12814,NA12874,NA18970,NA19141,NA19143 nsv1140406 1 8446627 8448679 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960952,nssv3979112 M 2 0 0 RERE KWS1,KWS2 esv3585147 1 8447277 8475460 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9849159 M 2504 0 1 RERE NA19676 esv2674889 1 8447365 8475544 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5500893 M 1151 0 1 RERE NA19676 nsv524946 1 8455712 8472164 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700963 M 2026 0 1 RERE nsv947412 1 8479574 8482106 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762537 M 97 1 0 RERE HGDP00998 nsv1012632 1 8480150 8883506 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473413 M 29084 1 0 RERE nsv1113071 1 8493918 8501990 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990233,nssv3982412 M 2 0 2 RERE KWS1,KWS2 esv3360802 1 8501982 8502001 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593635,essv9593602,essv9593624,essv9593613 M 185 4 0 RERE NA11931,NA12045,NA12287,NA12814 esv3305985 1 8501991 8501992 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768946,essv7766623,essv7767274,essv7764325,essv7769792,essv7769164 M 185 6 0 RERE NA11894,NA11931,NA12045,NA12287,NA12814,NA12874 nsv479019 1 8509983 8509983 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019838 M 9 0 0 RERE nsv1122292 1 8527820 8527880 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969743 M 2 0 1 RERE KWS2 esv3441259 1 8528307 8528326 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593646 M 185 1 0 RERE NA11931 esv3569008 1 8534109 8540476 CNV gain Uddin_et_al_2014 25503493 SNP array essv9791866,essv9791422,essv9791089 M 873 3 0 RERE 400888MS,401391PJ,401792KR esv3577717 1 8534109 8540476 CNV loss Uddin_et_al_2014 25503493 SNP array essv9791311,essv9790977,essv9791755,essv9791200,essv9791977,essv9791644,essv9789978,essv9790533,essv9789866,essv9790644,essv9789755,essv9790755,essv9790089,essv9791533,essv9790866,essv9790200,essv9790422,essv9790311,essv9792088 M 873 0 19 RERE 400177SJ,400207HN,400234CA,400316SL,400319HT,400501SJ,400512LR,400629BM,400634MP,400686BM,400717BD,400793BR,401215MJ,401347DH,401437MJ,401465TB,401498HH,401813DN,401913GT esv3585149 1 8550232 8551315 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9849533,essv9849625,essv9849532,essv9849564,essv9849531,essv9849526,essv9849530,essv9849527,essv9849529,essv9849528,essv9849548,essv9849539,essv9849538,essv9849535,essv9849534,essv9849537,essv9849536,essv9849542,essv9849547,essv9849541,essv9849540,essv9849546,essv9849543,essv9849545,essv9849544,essv9849550,essv9849563,essv9849549,essv9849562,essv9849552,essv9849553,essv9849551,essv9849556,essv9849561,essv9849555,essv9849554,essv9849557,essv9849560,essv9849559,essv9849558,essv9849569,essv9849624,essv9849568,essv9849567,essv9849566,essv9849565,essv9849593,essv9849571,essv9849575,essv9849570,essv9849576,essv9849574,essv9849573,essv9849572,essv9849578,essv9849583,essv9849577,essv9849592,essv9849579,essv9849582,essv9849581,essv9849580,essv9849586,essv9849591,essv9849585,essv9849584,essv9849587,essv9849590,essv9849589,essv9849588,essv9849594,essv9849599,essv9849598,essv9849595,essv9849597,essv9849596,essv9849606,essv9849600,essv9849623,essv9849605,essv9849601,essv9849604,essv9849603,essv9849602,essv9849613,essv9849608,essv9849622,essv9849607,essv9849612,essv9849609,essv9849611,essv9849610,essv9849616,essv9849621,essv9849615,essv9849614,essv9849617,essv9849620,essv9849619,essv9849618,essv9849631,essv9849637,essv9849630,essv9849629,essv9849626,essv9849628,essv9849627,essv9849636,essv9849635,essv9849639,essv9849638,essv9849634,essv9849633,essv9849632,essv9849642,essv9849641,essv9849640,essv9849643,essv9849645,essv9849644,essv9849646,essv9849654,essv9849653,essv9849652,essv9849651,essv9849647,essv9849650,essv9849649,essv9849648,essv9849657,essv9849658,essv9849656,essv9849655,essv9849660,essv9849664,essv9849682,essv9849659,essv9849665,essv9849663,essv9849662,essv9849661,essv9849681,essv9849672,essv9849667,essv9849666,essv9849671,essv9849668,essv9849670,essv9849669,essv9849675,essv9849680,essv9849674,essv9849673,essv9849679,essv9849676,essv9849678,essv9849677,essv9849688,essv9849687,essv9849684,essv9849683,essv9849686,essv9849685,essv9849695,essv9849689,essv9849694,essv9849690,essv9849693,essv9849692,essv9849691,essv9849697,essv9849702,essv9849696,essv9849701,essv9849698,essv9849700,essv9849699,essv9849704,essv9849703 M 2504 0 179 RERE HG01108,HG01167,HG01174,HG01247,HG01350,HG01384,HG01485,HG01489,HG01879,HG01883,HG01886,HG01894,HG01896,HG01914,HG01915,HG01951,HG01956,HG01985,HG02012,HG02013,HG02107,HG02108,HG02144,HG02256,HG02284,HG02314,HG02323,HG02325,HG02332,HG02427,HG02445,HG02470,HG02477,HG02484,HG02496,HG02505,HG02545,HG02571,HG02573,HG02580,HG02585,HG02586,HG02595,HG02678,HG02703,HG02722,HG02757,HG02768,HG02769,HG02798,HG02805,HG02808,HG02810,HG02813,HG02814,HG02817,HG02820,HG02837,HG02839,HG02854,HG02861,HG02878,HG02882,HG02884,HG02923,HG02943,HG02952,HG02953,HG02968,HG02973,HG02974,HG02977,HG03025,HG03028,HG03040,HG03045,HG03064,HG03069,HG03082,HG03086,HG03088,HG03103,HG03108,HG03115,HG03129,HG03132,HG03133,HG03160,HG03168,HG03190,HG03196,HG03224,HG03225,HG03259,HG03304,HG03311,HG03343,HG03366,HG03372,HG03391,HG03428,HG03433,HG03436,HG03442,HG03455,HG03458,HG03469,HG03476,HG03485,HG03517,HG03520,HG03521,HG03571,NA18508,NA18517,NA18520,NA18856,NA18858,NA18864,NA18865,NA18870,NA18874,NA18876,NA18915,NA18934,NA19027,NA19028,NA19030,NA19036,NA19093,NA19096,NA19116,NA19117,NA19118,NA19121,NA19129,NA19130,NA19146,NA19147,NA19153,NA19172,NA19185,NA19190,NA19197,NA19204,NA19206,NA19210,NA19235,NA19247,NA19248,NA19257,NA19310,NA19316,NA19317,NA19321,NA19355,NA19376,NA19379,NA19401,NA19429,NA19434,NA19438,NA19439,NA19445,NA19449,NA19454,NA19457,NA19462,NA19625,NA19658,NA19682,NA19684,NA19703,NA19835,NA20281,NA20287,NA20296,NA20299,NA20359 esv2658508 1 8550246 8551326 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6564525,essv6498976,essv6587455,essv6251894,essv5626398,essv6414719,essv5559262,essv6233344,essv5411462,essv6437544,essv5440404,essv6056060,essv5485459,essv6104798,essv5684596,essv5979257,essv5580820,essv6062960,essv5573556,essv5997657,essv5459792,essv6049526,essv5438161,essv6184313,essv5705056,essv6002612,essv5396045,essv5951206,essv5722851,essv5794451,essv5525731,essv6458320,essv5473287,essv6060066,essv5406895,essv5860653,essv5928864,essv6361968,essv5769185,essv6364724,essv5781398,essv5999450,essv6218155,essv5883424,essv6380234 M 1151 0 45 RERE HG01108,HG01174,HG01350,HG01384,HG01489,NA11931,NA18508,NA18517,NA18593,NA18856,NA18858,NA18870,NA18874,NA18934,NA19093,NA19129,NA19130,NA19147,NA19153,NA19190,NA19197,NA19204,NA19210,NA19235,NA19247,NA19257,NA19311,NA19316,NA19355,NA19371,NA19376,NA19379,NA19398,NA19401,NA19429,NA19434,NA19444,NA19445,NA19457,NA19462,NA19625,NA19682,NA19684,NA19703,NA19835 esv25533 1 8550458 8551722 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13828,esv11693 M 40 0 4 RERE NA18517,NA18858,NA19129,NA19190 esv3391677 1 8569463 8569463 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740979 M 185 1 0 RERE NA19240 nsv159615 1 8577616 8581235 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178193 M 24 RERE nsv947413 1 8669419 8674457 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2765449,nssv2761317,nssv2756775,nssv2757427 M 97 4 0 RERE HGDP00456,HGDP00778,HGDP00927,HGDP01029 nsv826919 1 8671390 8673970 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423363 M 31 1 0 RERE NA18968 esv26500 1 8671618 8685734 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17365,esv13894,esv15623,esv10195 M 40 2 28 RERE NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12776,NA12828,NA12878,NA15510,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19108,NA19129,NA19147,NA19225,NA19240 nsv945758 1 8674457 8676429 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752579,nssv1752574,nssv1752582,nssv1752581,nssv1752575,nssv1752576,nssv1752580,nssv1752583,nssv1752578,nssv1752577 M 97 10 0 RERE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv827030 1 8674560 8685010 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1435647 M 31 0 1 RERE NA18566 dgv11e212 1 8690933 8716080 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577719,esv3577718 M 873 0 2 RERE 401357MH,401804FG esv3577720 1 8695755 8707826 CNV loss Uddin_et_al_2014 25503493 SNP array essv9792422 M 873 0 1 RERE 400882DD esv2743497 1 8705665 8706618 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6780859,essv6699591,essv6902523,essv6689251,essv6824972,essv6847000,essv6967919,essv6748220,essv6729611,essv6714231,essv6950541,essv6789142,essv6679157,essv6832590,essv6769508,essv6916596,essv6876665,essv6972324,essv6853223,essv6921704,essv6773428,essv6910032,essv6946482,essv6784985,essv6692752,essv6668935,essv6954728,essv6950139,essv6721997,essv6917414,essv6793273,essv6738800 M 96 0 32 RERE SSM003,SSM004,SSM008,SSM012,SSM013,SSM015,SSM017,SSM018,SSM024,SSM025,SSM026,SSM028,SSM029,SSM031,SSM033,SSM036,SSM037,SSM039,SSM043,SSM045,SSM047,SSM052,SSM065,SSM066,SSM068,SSM069,SSM070,SSM071,SSM080,SSM082,SSM086,SSM087 esv2743508 1 8705833 8706336 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6832590,essv6946482,essv6967919,essv6902523,essv6689251,essv6699591,essv6789142,essv6824972,essv6780859,essv6847000,essv6950541,essv6729611,essv6748220,essv6714231,essv6921704,essv6910032,essv6853223,essv6784985,essv6692752,essv6679157,essv6668935,essv6954728,essv6876665,essv6950139,essv6721997,essv6793273,essv6917414 M 96 0 27 RERE SSM004,SSM008,SSM012,SSM013,SSM015,SSM017,SSM018,SSM024,SSM025,SSM026,SSM028,SSM031,SSM033,SSM036,SSM037,SSM039,SSM043,SSM045,SSM047,SSM068,SSM069,SSM070,SSM071,SSM080,SSM082,SSM086,SSM087 esv2407042 1 8705946 8706370 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4792099 M 1 0 1 RERE NA18507 nsv1129127 1 8713261 8713320 CNV insertion Alsmadi_et_al_2014 24896259 Sequencing nssv3961803 M 2 1 0 RERE KWS1 esv27511 1 8715188 8720239 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17675 M 40 2 0 RERE NA15510,NA18861 nsv827141 1 8715751 8719780 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423374 M 31 1 0 RERE NA18968 esv2743519 1 8728615 8729481 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961541,essv6847001,essv6742128,essv6776928,essv6859177,essv6759033,essv6714233,essv6735969,essv6972325,essv6773429,essv6668936,essv6747766,essv6753485,essv6954730,essv6876676,essv6738801 M 96 0 16 RERE SSM012,SSM026,SSM027,SSM029,SSM031,SSM043,SSM050,SSM052,SSM053,SSM056,SSM058,SSM061,SSM066,SSM067,SSM086,SSM088 esv2384996 1 8728829 8729270 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4771378 M 1 0 1 RERE NA18507 esv2743530 1 8728882 8729237 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961541,essv6776928,essv6847001,essv6859177,essv6668936,essv6954730 M 96 0 6 RERE SSM026,SSM027,SSM031,SSM067,SSM086,SSM088 esv2743541 1 8728984 8729140 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961541,essv6847001,essv6859177,essv6668936,essv6954730 M 96 0 5 RERE SSM026,SSM027,SSM031,SSM086,SSM088 esv2743552 1 8729027 8729101 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6847001,essv6961541,essv6859177,essv6954730 M 96 0 4 RERE SSM026,SSM027,SSM086,SSM088 nsv953453 1 8763001 8775100 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001734 M 1 1 0 RERE BILGI_BIOE nsv1126175 1 8763200 8763500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984404 M 2 0 1 RERE KWS1 esv3585150 1 8765907 8775376 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9849705 M 2504 0 1 RERE NA18508 esv25426 1 8766443 8774912 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17965 M 40 0 1 RERE NA18508 nsv1006756 1 8771440 8809049 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469495 M 29084 1 0 RERE nsv945760 1 8808975 8811704 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752623,nssv1752585,nssv1752635,nssv1752587,nssv1752632,nssv1752600,nssv1752654,nssv1752591,nssv1752652,nssv1752669,nssv1752636,nssv1752668,nssv1752656,nssv1752593,nssv1752633,nssv1752586,nssv1752618,nssv1752604,nssv1752611,nssv1752603,nssv1752634,nssv1752664,nssv1752640,nssv1752598,nssv1752628,nssv1752612,nssv1752642,nssv1752661,nssv1752626,nssv1752590,nssv1752672,nssv1752662,nssv1752638,nssv1752605,nssv1752627,nssv1752613,nssv1752646,nssv1752595,nssv1752637,nssv1752594,nssv1752584,nssv1752606,nssv1752647,nssv1752615,nssv1752607,nssv1752599,nssv1752648,nssv1752665,nssv1752644,nssv1752608,nssv1752629,nssv1752589,nssv1752614,nssv1752588,nssv1752620,nssv1752667,nssv1752649,nssv1752597,nssv1752678,nssv1752592,nssv1752651,nssv1752663,nssv1752677,nssv1752666,nssv1752674,nssv1752670,nssv1752621,nssv1752596,nssv1752675,nssv1752602,nssv1752625,nssv1752601,nssv1752680,nssv1752645,nssv1752610,nssv1752631,nssv1752673,nssv1752643,nssv1752624,nssv1752671,nssv1752655,nssv1752657,nssv1752659,nssv1752679,nssv1752653,nssv1752619,nssv1752609,nssv1752660,nssv1752641,nssv1752639,nssv1752617,nssv1752616,nssv1752630,nssv1752650,nssv1752658,nssv1752622,nssv1752676 M 97 10 0 RERE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1854 1 8826155 8859690 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7349 M 9 1 0 RERE NA12156 nsv945761 1 8845223 8849700 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752682,nssv1752757,nssv1752709,nssv1752706,nssv1752699,nssv1752747,nssv1752765,nssv1752738,nssv1752688,nssv1752733,nssv1752759,nssv1752717,nssv1752695,nssv1752707,nssv1752702,nssv1752751,nssv1752710,nssv1752727,nssv1752683,nssv1752731,nssv1752766,nssv1752725,nssv1752761,nssv1752708,nssv1752700,nssv1752749,nssv1752684,nssv1752715,nssv1752687,nssv1752741,nssv1752691,nssv1752755,nssv1752758,nssv1752743,nssv1752701,nssv1752713,nssv1752692,nssv1752777,nssv1752703,nssv1752735,nssv1752762,nssv1752739,nssv1752690,nssv1752704,nssv1752705,nssv1752714,nssv1752693,nssv1752756,nssv1752686,nssv1752737,nssv1752697,nssv1752732,nssv1752763,nssv1752773,nssv1752685,nssv1752753,nssv1752764,nssv1752745,nssv1752712,nssv1752748,nssv1752694,nssv1752723,nssv1752689,nssv1752730,nssv1752760,nssv1752726,nssv1752767,nssv1752750,nssv1752696,nssv1752716,nssv1752698,nssv1752736,nssv1752771,nssv1752734,nssv1752774,nssv1752775,nssv1752744,nssv1752769,nssv1752719,nssv1752681,nssv1752728,nssv1752718,nssv1752742,nssv1752729,nssv1752772,nssv1752740,nssv1752746,nssv1752711,nssv1752722,nssv1752770,nssv1752724,nssv1752752,nssv1752776,nssv1752754,nssv1752720,nssv1752768,nssv1752721 M 97 10 0 RERE HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1113072 1 8863422 8863507 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967962 M 2 0 1 RERE KWS2 nsv945762 1 8883369 8896803 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752799,nssv1752811,nssv1752779,nssv1753236,nssv1752793,nssv1752828,nssv1753255,nssv1752816,nssv1753248,nssv1752825,nssv1752806,nssv1753238,nssv1752786,nssv1753256,nssv1752788,nssv1752804,nssv1753253,nssv1752808,nssv1752785,nssv1753264,nssv1752809,nssv1752839,nssv1752797,nssv1753240,nssv1753251,nssv1752833,nssv1752784,nssv1752813,nssv1752807,nssv1752819,nssv1752790,nssv1753241,nssv1753249,nssv1753257,nssv1752792,nssv1753258,nssv1752798,nssv1753243,nssv1753254,nssv1752814,nssv1752789,nssv1753239,nssv1753246,nssv1753265,nssv1752800,nssv1753242,nssv1752802,nssv1753259,nssv1752783,nssv1753245,nssv1752794,nssv1753235,nssv1753250,nssv1752826,nssv1753247,nssv1752835,nssv1752781,nssv1752830,nssv1752782,nssv1752824,nssv1752780,nssv1752836,nssv1752795,nssv1752810,nssv1753252,nssv1752803,nssv1752796,nssv1752805,nssv1752791,nssv1752820,nssv1752787,nssv1752838,nssv1752831,nssv1752821,nssv1753262,nssv1753261,nssv1753237,nssv1753244,nssv1753263,nssv1752812,nssv1752801,nssv1752834,nssv1752827,nssv1752817,nssv1753233,nssv1752829,nssv1752823,nssv1752841,nssv1752832,nssv1752822,nssv1752818,nssv1752840,nssv1752815,nssv1752778,nssv1753234,nssv1753260,nssv1752837 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2758919 1 8888241 8916640 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757721 M 270 1 0 "" NA18863 nsv1010058 1 8890782 8905149 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3469656 M 29084 1 0 "" nsv545345 1 8891125 9095610 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709653 M 17421 1 0 CA6,ENO1,ENO1-AS1,MIR6728,SLC2A7 esv3585151 1 8896797 8908252 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9849706 M 2504 1 0 "" HG00437 esv3585152 1 8902400 8903006 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9849707 M 2504 0 1 "" HG02238 nsv1001865 1 8903931 8933242 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3463122 M 29084 1 0 ENO1,MIR6728 esv3585154 1 8924066 8925394 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9849709 M 2504 0 1 ENO1 HG02058 nsv945763 1 8953626 8964009 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753276,nssv1753305,nssv1753284,nssv1753356,nssv1753275,nssv1753341,nssv1753267,nssv1753319,nssv1753351,nssv1753332,nssv1753294,nssv1753354,nssv1753287,nssv1753310,nssv1753279,nssv1753296,nssv1753283,nssv1753357,nssv1753268,nssv1753320,nssv1753350,nssv1753324,nssv1753272,nssv1753337,nssv1753273,nssv1753314,nssv1753295,nssv1753330,nssv1753297,nssv1753353,nssv1753285,nssv1753361,nssv1753343,nssv1753313,nssv1753346,nssv1753326,nssv1753352,nssv1753333,nssv1753344,nssv1753322,nssv1753345,nssv1753303,nssv1753348,nssv1753359,nssv1753269,nssv1753316,nssv1753349,nssv1753327,nssv1753280,nssv1753302,nssv1753278,nssv1753300,nssv1753347,nssv1753301,nssv1753271,nssv1753340,nssv1753277,nssv1753318,nssv1753290,nssv1753336,nssv1753286,nssv1753291,nssv1753282,nssv1753338,nssv1753288,nssv1753289,nssv1753274,nssv1753312,nssv1753281,nssv1753342,nssv1753270,nssv1753307,nssv1753266,nssv1753362,nssv1753355,nssv1753339,nssv1753331,nssv1753311,nssv1753317,nssv1753325,nssv1753321,nssv1753293,nssv1753323,nssv1753358,nssv1753329,nssv1753309,nssv1753292,nssv1753306,nssv1753298,nssv1753315,nssv1753360,nssv1753308,nssv1753328,nssv1753334,nssv1753335,nssv1753304,nssv1753299 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1113073 1 8960279 8960338 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967963 M 2 0 1 "" KWS2 nsv945764 1 8965818 8969898 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753442,nssv1753435,nssv1753377,nssv1753363,nssv1753391,nssv1753390,nssv1753364,nssv1753413,nssv1753383,nssv1753426,nssv1753384,nssv1753428,nssv1753378,nssv1753456,nssv1753448,nssv1753403,nssv1753371,nssv1753402,nssv1753380,nssv1753431,nssv1753445,nssv1753393,nssv1753447,nssv1753427,nssv1753373,nssv1753438,nssv1753376,nssv1753401,nssv1753370,nssv1753395,nssv1753381,nssv1753389,nssv1753446,nssv1753432,nssv1753382,nssv1753416,nssv1753443,nssv1753421,nssv1753392,nssv1753454,nssv1753449,nssv1753412,nssv1753365,nssv1753405,nssv1753366,nssv1753450,nssv1753441,nssv1753423,nssv1753375,nssv1753451,nssv1753394,nssv1753396,nssv1753367,nssv1753417,nssv1753372,nssv1753434,nssv1753374,nssv1753410,nssv1753444,nssv1753430,nssv1753368,nssv1753407,nssv1753369,nssv1753458,nssv1753387,nssv1753429,nssv1753379,nssv1753419,nssv1753385,nssv1753400,nssv1753440,nssv1753399,nssv1753439,nssv1753424,nssv1753437,nssv1753398,nssv1753425,nssv1753411,nssv1753397,nssv1753459,nssv1753453,nssv1753422,nssv1753418,nssv1753414,nssv1753404,nssv1753455,nssv1753436,nssv1753415,nssv1753406,nssv1753433,nssv1753420,nssv1753457,nssv1753408,nssv1753388,nssv1753452,nssv1753386,nssv1753409 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2670913 1 8976892 8978092 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6311641,essv5746434 M 1151 0 2 "" HG01108,NA18523 esv3585157 1 8977136 8978028 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850134,essv9850136,essv9850135 M 2504 0 3 "" HG01108,HG02317,HG02462 nsv527110 1 8991141 8991873 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703492 M 2026 0 1 "" esv3585158 1 8998691 9000106 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850139,essv9850138,essv9850137,essv9850140,essv9850141 M 2504 0 5 "" HG00266,HG01625,HG01631,HG01784,HG02277 esv2763506 1 9001487 9027914 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7031523 M 1109 1 0 CA6 SW_1056 esv3585159 1 9001741 9002484 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850142 M 2504 0 1 "" HG03713 nsv1965 1 9003738 9007657 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3239 M 9 1 0 CA6 NA12878 esv3585160 1 9006369 9012990 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850144,essv9850143,essv9850147,essv9850146,essv9850145,essv9850148,essv9850150,essv9850149 M 2504 0 8 CA6 HG02481,HG02836,HG02878,HG03224,HG03363,HG03410,NA18881,NA20289 esv2762130 1 9007556 9012737 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004941 M 1109 0 1 CA6 RW_0183 nsv516097 1 9009406 9011722 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv660321,nssv660728,nssv666175,nssv671923,nssv671111,nssv671439,nssv660579,nssv692368,nssv669183 M 2026 0 9 CA6 esv3890637 1 9015436 9044562 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25789263 M 3017 1 0 CA6 nsv471857 1 9020717 9020717 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020083 M 9 1 0 CA6 NA18555 nsv526389 1 9039022 9049872 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702688 M 2026 0 1 "" esv2763512 1 9039022 9056507 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7031634 M 1109 0 1 "" SW_1309 nsv1009004 1 9039704 9074465 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3482463 M 29084 0 1 SLC2A7 dgv15n100 1 9052154 9116743 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1009990,nsv1005347 M 29084 0 2 SLC2A5,SLC2A7 nsv462616 1 9058546 9080966 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538732 M 1557 1 0 SLC2A7 HGDP00806 nsv525092 1 9058546 9080966 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701151 M 2026 1 0 SLC2A7 nsv545346 1 9058546 9080966 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173657 M 17421 1 0 SLC2A7 HGDP00806 nsv1004025 1 9061042 9129145 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467938 M 29084 1 0 SLC2A5,SLC2A7 nsv462727 1 9080411 9133056 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538823 M 1557 0 1 SLC2A5,SLC2A7 1780854205_A nsv545347 1 9080411 9133056 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173658 M 17421 0 1 SLC2A5,SLC2A7 1780854205_A esv2669366 1 9090088 9090675 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5962881,essv5573944 M 1151 0 2 "" NA19257,NA19469 nsv831981 1 9091717 9247567 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442663 M 95 0 1 GPR157,MIR34A,SLC2A5 esv3577721 1 9104452 9119988 CNV loss Uddin_et_al_2014 25503493 SNP array essv9792755,essv9792644,essv9793088,essv9792533,essv9792977,essv9792866 M 873 0 6 SLC2A5 400413FJ,401093VL,401146US,401513KC,401591BE,401856GC esv3585161 1 9105430 9109497 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850152,essv9850151 M 2504 2 0 SLC2A5 HG00105,NA11995 esv1504235 1 9113520 9113520 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3665009 M 2 1 0 SLC2A5 HuRef esv1740239 1 9113555 9113555 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4265262 M 2 1 0 SLC2A5 HuRef nsv512717 1 9120955 9121796 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625341 M 1 1 0 SLC2A5 1 esv3542788 1 9123690 9124098 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9741535 M 767 0 1 SLC2A5 esv2674776 1 9134123 9136941 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6263075,essv5464964 M 1151 0 2 "" HG01137,NA11919 esv3585162 1 9134134 9136900 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850153,essv9850154,essv9850155,essv9850160,essv9850159,essv9850156,essv9850158,essv9850157,essv9850162,essv9850161 M 2504 0 10 "" HG00100,HG00146,HG00233,HG00265,HG01064,HG01137,HG01139,HG01412,HG01761,NA11919 esv2422210 1 9166576 9274632 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161558 M 181 1 0 GPR157,MIR34A ND01701 esv3585164 1 9170160 9181131 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850189,essv9850191,essv9850190 M 2504 0 3 GPR157 HG02136,HG03772,HG04238 esv2675581 1 9171824 9176317 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6355094 M 1151 0 1 GPR157 NA18983 esv3585165 1 9171841 9176285 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850192,essv9850193,essv9850194 M 2504 0 3 GPR157 HG03772,HG04238,NA18983 esv1519481 1 9176244 9176244 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4133256 M 2 1 0 GPR157 HuRef nsv954649 1 9183217 9183398 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000464 M 1 0 1 GPR157 BILGI_BIOE nsv832092 1 9186568 9364602 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442674 M 95 0 1 GPR157,H6PD,MIR34A,SPSB1 nsv1077038 1 9189099 9189500 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764626 M 1 0 1 GPR157 KWP1 nsv1119664 1 9202917 9202979 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982109 M 2 0 1 "" KWS1 esv3585166 1 9215067 9215937 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850195 M 2504 0 1 "" NA18865 esv3385422 1 9230309 9230973 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652100 M 185 1 0 "" NA19240 nsv1133807 1 9283561 9283633 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969378 M 2 0 1 "" KWS2 nsv1125455 1 9283580 9283677 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3983629 M 2 0 0 "" KWS2 esv3585167 1 9288533 9290834 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850196 M 2504 0 1 "" NA07037 esv2677452 1 9288597 9290878 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5621555 M 1151 0 1 "" NA07037 nsv1143434 1 9294800 9295200 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980632 M 2 0 1 H6PD KWS1 dgv16n100 1 9297660 9411469 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1002217,nsv1009914,nsv999955,nsv1006294,nsv1009956,nsv1014684,nsv1011354,nsv1013944,nsv1010537,nsv1004906 M 29084 17 0 H6PD,SPSB1 nsv1122293 1 9298112 9299955 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969744 M 2 0 1 H6PD KWS2 dgv12e212 1 9303743 9404967 CNV gain Uddin_et_al_2014 25503493 SNP array esv3574563,esv3575249,esv3570119,esv3572341,esv3571230,esv3573452 M 873 7 0 H6PD,SPSB1 400059SV,400083TG,400650RM,401235IA,401258PC,401380OL,401443JK esv2763409 1 9308037 9405017 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032634,essv7031967,essv7031856,essv7032189,essv7031745,essv7032078,essv7032412,essv7032523,essv7032301 M 1109 9 0 H6PD,SPSB1 SW_0009,SW_0072,SW_0189,SW_0199,SW_0641,SW_1193,SW_1358,SW_1467,SW_1503 dgv96n54 1 9309746 9387444 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545358,nsv545359,nsv545352,nsv545351,nsv545348 M 17421 9 0 H6PD,SPSB1 1780854392_A dgv97n54 1 9309746 9412787 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545356,nsv545357,nsv545360,nsv545361,nsv545354,nsv545355,nsv545353,nsv545349 M 17421 12 0 H6PD,SPSB1 1780854556_A,1780862066_A,1780862577_A,HGDP00136 esv2743563 1 9310369 9310494 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6718159 M 96 0 1 H6PD SSM044 dgv2e55 1 9315847 9404693 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750843,esv2750844,esv2750846 M 771 9 0 H6PD,SPSB1 BEC_287,BEC_670,SPC_192 esv23318 1 9317806 9321226 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16429 M 40 0 1 H6PD NA12749 dgv40e59 1 9317965 9321063 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3335318,esv3394437,esv3446798 M 185 3 0 H6PD NA19238,NA19239,NA19240 nsv1075364 1 9318099 9320800 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3770936 M 1 1 0 H6PD KWP1 nsv1147163 1 9318099 9320800 CNV duplication John_et_al_2014 26484159 Sequencing nssv3998525 M 1 1 0 H6PD KWB1 nsv1128586 1 9318300 9320800 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960497 M 2 1 0 H6PD KWS1 nsv545350 1 9318401 9366852 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709657 M 17421 1 0 H6PD,SPSB1 dgv3n27 1 9318401 9412408 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463172,nsv462839,nsv463061,nsv462950,nsv463950 M 1557 5 0 H6PD,SPSB1 1780854392_A,1780854556_A,1780862066_A,1780862577_A,HGDP00136 nsv1139468 1 9319200 9321000 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977055 M 2 1 0 H6PD KWS2 esv3585168 1 9320144 9403779 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850197,essv9850199,essv9850204,essv9850198,essv9850200,essv9850203,essv9850202,essv9850201,essv9850205 M 2504 9 0 H6PD,SPSB1 HG00257,HG01707,HG03941,HG04188,NA18544,NA20588,NA20815,NA20858,NA20896 nsv520191 1 9321241 9396660 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696393,nssv662674,nssv661584,nssv687341,nssv688630 M 2026 5 0 H6PD,SPSB1 dgv13e212 1 9326599 9399793 CNV gain Uddin_et_al_2014 25503493 SNP array esv3575471,esv3575360 M 873 2 0 H6PD,SPSB1 400155CW,400323AA dgv17n100 1 9326646 9410245 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001425,nsv1002787,nsv1003940,nsv999816,nsv1002706,nsv1002792,nsv1004173,nsv1007996,nsv1006562,nsv1012017,nsv1013520 M 29084 39 0 H6PD,SPSB1 esv2750845 1 9327413 9389218 CNV gain Pinto_et_al_2007 17911159 SNP array essv6985406,essv6980777 M 771 2 0 H6PD,SPSB1 BEC_149 esv3577722 1 9334714 9354974 CNV loss Uddin_et_al_2014 25503493 SNP array essv9794199 M 873 0 1 SPSB1 401056TJ esv2743574 1 9358411 9358475 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6668937 M 96 0 1 SPSB1 SSM031 esv2743586 1 9358438 9358566 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6793274 M 96 0 1 SPSB1 SSM071 esv2201511 1 9369979 9370402 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4737746 M 1 0 1 SPSB1 NA18507 esv1000068 1 9370131 9370131 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571220 M 3 1 0 SPSB1 HuRef nsv464172 1 9377864 9413646 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540129 M 1557 0 1 SPSB1 1780854065_A nsv545362 1 9377864 9413646 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173664 M 17421 0 1 SPSB1 1780854065_A esv3585169 1 9403667 9411371 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850206 M 2504 1 0 SPSB1 NA18544 nsv827253 1 9431355 9432029 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431791 M 31 0 1 "" AK20 esv2616653 1 9439330 9441001 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5231075 M 1 0 1 "" NA18507 esv2203424 1 9439900 9440552 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4643328 M 1 0 1 "" NA18507 esv2671551 1 9439964 9440516 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5769749,essv6383000,essv5803169,essv6064542,essv5936819,essv6306689,essv5675200,essv6310252,essv5835426,essv6215876,essv5886599,essv6584703,essv5920208,essv6192437,essv5565537,essv6217017,essv5617422,essv6360424,essv6081254,essv6387779 M 1151 0 20 "" HG00638,HG00731,HG01342,HG01551,NA18504,NA18516,NA18871,NA19099,NA19172,NA19350,NA19379,NA19391,NA19396,NA19397,NA19399,NA19448,NA19472,NA19625,NA19684,NA20334 nsv1013224 1 9441040 9699768 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3474728 M 29084 1 0 LOC100506022,SLC25A33,TMEM201 esv3585170 1 9452693 9454546 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850207 M 2504 0 1 "" HG03199 esv2661068 1 9453863 9456551 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6347520 M 1151 0 1 "" NA18530 esv3585171 1 9453882 9456588 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850208 M 2504 0 1 "" NA18530 esv2443842 1 9470413 9471232 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5170213 M 1 1 0 "" NA18507 esv3367825 1 9471160 9472583 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652101 M 185 1 0 "" NA19240 nsv1113074 1 9475678 9475734 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967964 M 2 0 1 "" KWS2 nsv545363 1 9495571 9677853 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709671 M 17421 0 1 SLC25A33,TMEM201 esv3585172 1 9495904 9497610 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850209 M 2504 0 1 "" NA12763 esv2667953 1 9495942 9497542 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5632014 M 1151 0 1 "" NA12763 esv3585173 1 9499638 9503787 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850211,essv9850210 M 2504 0 2 "" HG00182,HG02150 nsv517755 1 9514846 9539693 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv674995,nssv653129,nssv658552,nssv693425,nssv661666,nssv670279,nssv692200 M 2026 0 7 "" esv3585174 1 9517431 9520277 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850212 M 2504 0 1 "" HG01847 esv3379170 1 9536765 9538563 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692431 M 185 1 0 "" NA19239 dgv41e59 1 9537465 9538563 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3382125,esv3423918 M 185 2 0 "" NA19238,NA19240 esv2743597 1 9538089 9538516 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6828993 M 96 0 1 "" SSM081 dgv5e214 1 9579119 9583367 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing esv3585176,esv3585177 M 2504 0 4 "" HG00259,HG01464,NA12872,NA20814 esv3585178 1 9579979 9583367 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850267 M 2504 1 0 "" HG03559 esv3577723 1 9593041 9602360 CNV loss Uddin_et_al_2014 25503493 SNP array essv9795310,essv9794533,essv9795421,essv9795088,essv9794644,essv9794310,essv9795199,essv9794866,essv9794422,essv9794755,essv9794977 M 873 0 11 SLC25A33 400079AP,400323AA,400425SL,400712GC,400724CD,400773GS,400859SC,400987FB,401266HM,401353BC,401852SK esv2476310 1 9593578 9600139 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5297378 M 1 0 1 SLC25A33 NA18507 esv2670448 1 9593845 9597892 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5539365,essv6388632,essv5925442,essv6074107,essv5643099,essv6479954,essv5533540,essv6119124,essv5721976,essv6455016,essv5413732,essv6291725,essv5675858,essv6300000,essv5724018,essv6304955,essv5559191,essv6577990,essv5959669,essv6316201,essv5860346,essv6094129,essv5556714,essv6590645,essv5969464,essv6150008,essv5899867,essv6592655,essv5805037,essv6060563,essv5883044,essv6075149,essv5863264,essv6352603,essv5542328,essv6529781,essv5924076,essv6578697,essv6291603 M 1151 0 39 "" NA19313,NA19316,NA19318,NA19319,NA19331,NA19334,NA19347,NA19355,NA19371,NA19372,NA19375,NA19376,NA19382,NA19383,NA19385,NA19391,NA19393,NA19395,NA19404,NA19429,NA19430,NA19431,NA19434,NA19436,NA19438,NA19443,NA19448,NA19449,NA19451,NA19452,NA19455,NA19456,NA19463,NA19466,NA19467,NA19468,NA19470,NA19471,NA19473 esv2577357 1 9594904 9598296 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5368321 M 1 0 1 "" NA18507 esv3585179 1 9595360 9597869 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9850646,essv9850643,essv9850645,essv9850644,essv9850534,essv9850533,essv9850573,essv9850641,essv9850503,essv9850804,essv9850717,essv9850642,essv9850502,essv9850498,essv9850501,essv9850500,essv9850499,essv9850507,essv9850532,essv9850512,essv9850506,essv9850505,essv9850504,essv9850511,essv9850508,essv9850510,essv9850509,essv9850523,essv9850531,essv9850522,essv9850521,essv9850530,essv9850525,essv9850524,essv9850526,essv9850542,essv9850537,essv9850572,essv9850553,essv9850536,essv9850535,essv9850538,essv9850541,essv9850540,essv9850539,essv9850552,essv9850545,essv9850544,essv9850543,essv9850551,essv9850548,essv9850547,essv9850546,essv9850550,essv9850549,essv9850571,essv9850555,essv9850562,essv9850554,essv9850556,essv9850561,essv9850557,essv9850560,essv9850559,essv9850558,essv9850565,essv9850570,essv9850564,essv9850563,essv9850566,essv9850569,essv9850567,essv9850568,essv9850609,essv9850640,essv9850579,essv9850574,essv9850590,essv9850803,essv9850718,essv9850520,essv9850575,essv9850578,essv9850577,essv9850576,essv9850582,essv9850589,essv9850580,essv9850581,essv9850585,essv9850588,essv9850584,essv9850583,essv9850587,essv9850586,essv9850608,essv9850592,essv9850599,essv9850591,essv9850598,essv9850593,essv9850594,essv9850596,essv9850595,essv9850597,essv9850607,essv9850602,essv9850601,essv9850600,essv9850603,essv9850606,essv9850604,essv9850605,essv9850802,essv9850612,essv9850617,essv9850719,essv9850639,essv9850628,essv9850611,essv9850610,essv9850519,essv9850613,essv9850616,essv9850615,essv9850614,essv9850620,essv9850627,essv9850618,essv9850619,essv9850622,essv9850621,essv9850626,essv9850625,essv9850624,essv9850623,essv9850638,essv9850495,essv9850635,essv9850630,essv9850801,essv9850629,essv9850518,essv9850631,essv9850634,essv9850632,essv9850633,essv9850517,essv9850516,essv9850800,essv9850636,essv9850494,essv9850735,essv9850637,essv9850493,essv9850480,essv9850479,essv9850478,essv9850477,essv9850497,essv9850491,essv9850492,essv9850482,essv9850496,essv9850515,essv9850734,essv9850481,essv9850485,essv9850483,essv9850490,essv9850484,essv9850486,essv9850489,essv9850488,essv9850487,essv9850513,essv9850724,essv9850514,essv9850733,essv9850723,essv9850720,essv9850722,essv9850721,essv9850727,essv9850732,essv9850726,essv9850725,essv9850728,essv9850731,essv9850730,essv9850729,essv9850749,essv9850740,essv9850766,essv9850799,essv9850739,essv9850736,essv9850738,essv9850737,essv9850743,essv9850748,essv9850742,essv9850741,essv9850747,essv9850744,essv9850746,essv9850745,essv9850751,essv9850765,essv9850756,essv9850750,essv9850755,essv9850752,essv9850754,essv9850753,essv9850759,essv9850764,essv9850758,essv9850757,essv9850760,essv9850763,essv9850762,essv9850761,essv9850772,essv9850781,essv9850798,essv9850771,essv9850767,essv9850768,essv9850770,essv9850769,essv9850780,essv9850775,essv9850774,essv9850773,essv9850776,essv9850779,essv9850778,essv9850777,essv9850788,essv9850783,essv9850797,essv9850782,essv9850787,essv9850784,essv9850786,essv9850785,essv9850791,essv9850796,essv9850789,essv9850790,essv9850795,essv9850792,essv9850794,essv9850793,essv9850852,essv9850819,essv9851046,essv9850917,essv9850818,essv9850809,essv9850808,essv9850807,essv9850806,essv9850805,essv9850812,essv9850817,essv9850811,essv9850810,essv9850813,essv9850816,essv9850815,essv9850814,essv9850834,essv9850825,essv9850851,essv9850824,essv9850821,essv9850820,essv9850823,essv9850822,essv9850828,essv9850833,essv9850827,essv9850826,essv9850829,essv9850832,essv9850831,essv9850830,essv9850836,essv9850850,essv9850841,essv9850835,essv9850840,essv9850837,essv9850839,essv9850838,essv9850844,essv9850849,essv9850843,essv9850842,essv9850848,essv9850845,essv9850847,essv9850846,essv9850857,essv9850866,essv9850883,essv9850916,essv9850856,essv9850855,essv9850854,essv9850853,essv9850860,essv9850865,essv9850859,essv9850858,essv9850864,essv9850861,essv9850863,essv9850862,essv9850868,essv9850882,essv9850873,essv9850867,essv9850872,essv9850869,essv9850871,essv9850870,essv9850876,essv9850881,essv9850875,essv9850874,essv9850877,essv9850880,essv9850879,essv9850878,essv9850889,essv9850884,essv9850915,essv9850898,essv9850888,essv9850885,essv9850887,essv9850886,essv9850892,essv9850897,essv9850891,essv9850890,essv9850893,essv9850896,essv9850895,essv9850894,essv9850914,essv9850905,essv9850900,essv9850899,essv9850904,essv9850901,essv9850903,essv9850902,essv9850908,essv9850913,essv9850907,essv9850906,essv9850909,essv9850912,essv9850911,essv9850910,essv9850980,essv9850921,essv9850947,essv9850930,essv9851045,essv9850920,essv9850919,essv9850918,essv9850929,essv9850924,essv9850923,essv9850922,essv9850928,essv9850925,essv9850927,essv9850926,essv9850946,essv9850937,essv9850932,essv9850931,essv9850936,essv9850933,essv9850935,essv9850934,essv9850940,essv9850945,essv9850939,essv9850938,essv9850944,essv9850941,essv9850943,essv9850942,essv9850948,essv9850979,essv9850962,essv9850953,essv9850952,essv9850949,essv9850951,essv9850950,essv9850956,essv9850961,essv9850955,essv9850954,essv9850960,essv9850957,essv9850959,essv9850958,essv9850978,essv9850969,essv9850964,essv9850963,essv9850968,essv9850965,essv9850967,essv9850966,essv9850972,essv9850970,essv9850977,essv9850971,essv9850973,essv9850976,essv9850975,essv9850974,essv9851044,essv9851011,essv9850994,essv9850985,essv9850984,essv9850983,essv9850982,essv9850981,essv9850986,essv9850993,essv9850988,essv9850987,essv9850992,essv9850989,essv9850990,essv9850991,essv9851001,essv9850996,essv9851010,essv9850995,essv9851000,essv9850997,essv9850999,essv9850998,essv9851002,essv9851004,essv9851009,essv9851003,essv9851005,essv9851008,essv9851006,essv9851007,essv9851017,essv9851012,essv9851043,essv9851026,essv9851016,essv9851013,essv9851015,essv9851014,essv9851020,essv9851025,essv9851019,essv9851018,essv9851021,essv9851024,essv9851023,essv9851022,essv9851042,essv9851033,essv9851028,essv9851027,essv9851032,essv9851029,essv9851031,essv9851030,essv9851036,essv9851041,essv9851035,essv9851034,essv9851040,essv9851037,essv9851039,essv9851038,essv9851058,essv9851075,essv9851173,essv9851108,essv9851052,essv9851057,essv9851047,essv9851051,essv9851050,essv9851048,essv9851049,essv9851053,essv9851056,essv9851055,essv9851054,essv9851065,essv9851060,essv9851074,essv9851059,essv9851064,essv9851061,essv9851063,essv9851062,essv9851068,essv9851073,essv9851067,essv9851066,essv9851072,essv9851069,essv9851071,essv9851070,essv9851076,essv9851090,essv9851081,essv9851107,essv9851077,essv9851080,essv9851079,essv9851078,essv9851084,essv9851089,essv9851083,essv9851082,essv9851085,essv9851088,essv9851087,essv9851086,essv9851092,essv9851106,essv9851097,essv9851091,essv9851093,essv9851096,essv9851095,essv9851094,essv9851105,essv9851100,essv9851099,essv9851098,essv9851101,essv9851104,essv9851103,essv9851102,essv9851172,essv9851113,essv9851139,essv9851122,essv9851112,essv9851110,essv9851109,essv9851111,essv9851114,essv9851121,essv9851116,essv9851115,essv9851120,essv9851117,essv9851119,essv9851118,essv9851129,essv9851124,essv9851138,essv9851123,essv9851128,essv9851125,essv9851127,essv9851126,essv9851132,essv9851137,essv9851131,essv9851130,essv9851133,essv9851136,essv9851135,essv9851134,essv9851141,essv9851154,essv9851145,essv9851171,essv9851140,essv9851144,essv9851143,essv9851142,essv9851148,essv9851146,essv9851153,essv9851147,essv9851149,essv9851152,essv9851151,essv9851150,essv9851156,essv9851161,essv9851155,essv9851170,essv9851160,essv9851157,essv9851158,essv9851159,essv9851164,essv9851169,essv9851163,essv9851162,essv9851165,essv9851168,essv9851167,essv9851166,essv9851177,essv9851203,essv9851186,essv9851176,essv9851175,essv9851174,essv9851185,essv9851178,essv9851180,essv9851179,essv9851184,essv9851181,essv9851183,essv9851182,essv9851188,essv9851202,essv9851193,essv9851187,essv9851192,essv9851189,essv9851191,essv9851190,essv9851201,essv9851196,essv9851195,essv9851194,essv9851197,essv9851200,essv9851199,essv9851198,essv9851209,essv9851206,essv9851205,essv9851204,essv9851218,essv9851208,essv9851207,essv9851212,essv9851217,essv9851211,essv9851210,essv9851213,essv9851216,essv9851215,essv9851214,essv9851220,essv9851219,essv9851221,essv9851222,essv9850693,essv9850653,essv9850692,essv9850652,essv9850308,essv9850307,essv9850476,essv9850529,essv9850651,essv9850475,essv9850528,essv9850527,essv9850650,essv9850647,essv9850649,essv9850648,essv9850691,essv9850672,essv9850655,essv9850661,essv9850654,essv9850306,essv9850657,essv9850660,essv9850656,essv9850659,essv9850658,essv9850671,essv9850664,essv9850662,essv9850663,essv9850670,essv9850665,essv9850666,essv9850669,essv9850668,essv9850667,essv9850690,essv9850674,essv9850679,essv9850673,essv9850305,essv9850675,essv9850678,essv9850676,essv9850677,essv9850684,essv9850689,essv9850304,essv9850680,essv9850683,essv9850682,essv9850681,essv9850685,essv9850688,essv9850303,essv9850271,essv9850272,essv9850270,essv9850269,essv9850268,essv9850274,essv9850278,essv9850273,essv9850287,essv9850277,essv9850687,essv9850276,essv9850275,essv9850286,essv9850281,essv9850280,essv9850279,essv9850282,essv9850285,essv9850284,essv9850283,essv9850289,essv9850288,essv9850302,essv9850686,essv9850291,essv9850301,essv9850292,essv9850290,essv9850300,essv9850295,essv9850293,essv9850294,essv9850299,essv9850296,essv9850298,essv9850297,essv9850473,essv9850468,essv9850710,essv9850313,essv9850697,essv9850311,essv9850711,essv9850309,essv9850310,essv9850315,essv9850408,essv9850312,essv9850709,essv9850708,essv9850314,essv9850347,essv9850316,essv9850317,essv9850331,essv9850322,essv9850472,essv9850321,essv9850318,essv9850320,essv9850319,essv9850325,essv9850330,essv9850324,essv9850323,essv9850329,essv9850326,essv9850328,essv9850327,essv9850338,essv9850332,essv9850333,essv9850471,essv9850337,essv9850334,essv9850336,essv9850335,essv9850339,essv9850344,essv9850346,essv9850345,essv9850343,essv9850340,essv9850342,essv9850341,essv9850474,essv9850361,essv9850352,essv9850348,essv9850351,essv9850696,essv9850350,essv9850349,essv9850355,essv9850360,essv9850354,essv9850353,essv9850359,essv9850356,essv9850358,essv9850357,essv9850363,essv9850407,essv9850376,essv9850362,essv9850375,essv9850364,essv9850366,essv9850365,essv9850369,essv9850374,essv9850368,essv9850367,essv9850370,essv9850373,essv9850372,essv9850371,essv9850389,essv9850377,essv9850381,essv9850695,essv9850694,essv9850380,essv9850379,essv9850378,essv9850383,essv9850388,essv9850406,essv9850382,essv9850387,essv9850384,essv9850386,essv9850385,essv9850396,essv9850391,essv9850405,essv9850390,essv9850395,essv9850392,essv9850394,essv9850393,essv9850399,essv9850404,essv9850398,essv9850397,essv9850400,essv9850403,essv9850402,essv9850401,essv9850416,essv9850701,essv9850470,essv9850698,essv9850433,essv9850410,essv9850707,essv9850409,essv9850411,essv9850412,essv9850467,essv9850464,essv9850413,essv9850415,essv9850414,essv9850432,essv9850423,essv9850418,essv9850417,essv9850422,essv9850419,essv9850421,essv9850420,essv9850426,essv9850431,essv9850425,essv9850424,essv9850430,essv9850427,essv9850429,essv9850428,essv9850446,essv9850438,essv9850700,essv9850699,essv9850434,essv9850437,essv9850436,essv9850435,essv9850445,essv9850463,essv9850440,essv9850439,essv9850444,essv9850441,essv9850443,essv9850442,essv9850448,essv9850453,essv9850462,essv9850447,essv9850452,essv9850449,essv9850451,essv9850450,essv9850456,essv9850454,essv9850461,essv9850455,essv9850457,essv9850460,essv9850459,essv9850458,essv9850465,essv9850704,essv9850706,essv9850466,essv9850705,essv9850703,essv9850702,essv9850716,essv9850469,essv9850712,essv9850715,essv9850714,essv9850713 M 2504 0 955 "" HG00101,HG00103,HG00109,HG00114,HG00116,HG00121,HG00126,HG00128,HG00129,HG00131,HG00145,HG00159,HG00180,HG00182,HG00183,HG00185,HG00186,HG00190,HG00233,HG00237,HG00245,HG00259,HG00266,HG00269,HG00271,HG00274,HG00276,HG00280,HG00281,HG00313,HG00315,HG00318,HG00320,HG00323,HG00325,HG00326,HG00329,HG00334,HG00336,HG00337,HG00341,HG00344,HG00349,HG00353,HG00365,HG00373,HG00378,HG00380,HG00403,HG00409,HG00410,HG00421,HG00436,HG00437,HG00442,HG00443,HG00445,HG00448,HG00449,HG00451,HG00457,HG00458,HG00463,HG00464,HG00473,HG00476,HG00478,HG00500,HG00525,HG00531,HG00536,HG00537,HG00551,HG00553,HG00557,HG00559,HG00560,HG00583,HG00589,HG00596,HG00611,HG00613,HG00614,HG00619,HG00620,HG00622,HG00623,HG00625,HG00626,HG00628,HG00629,HG00637,HG00650,HG00651,HG00654,HG00656,HG00663,HG00671,HG00672,HG00689,HG00693,HG00699,HG00701,HG00707,HG00728,HG00729,HG00734,HG00743,HG00759,HG00844,HG00851,HG00867,HG00881,HG00956,HG00978,HG00982,HG01028,HG01031,HG01046,HG01058,HG01077,HG01079,HG01085,HG01098,HG01101,HG01105,HG01124,HG01131,HG01161,HG01176,HG01197,HG01247,HG01248,HG01259,HG01260,HG01286,HG01311,HG01326,HG01341,HG01344,HG01357,HG01366,HG01372,HG01384,HG01392,HG01412,HG01413,HG01414,HG01431,HG01438,HG01456,HG01464,HG01465,HG01488,HG01500,HG01503,HG01510,HG01522,HG01528,HG01578,HG01593,HG01595,HG01596,HG01597,HG01598,HG01600,HG01610,HG01613,HG01618,HG01620,HG01630,HG01669,HG01670,HG01673,HG01686,HG01697,HG01705,HG01707,HG01756,HG01757,HG01762,HG01765,HG01786,HG01790,HG01794,HG01795,HG01797,HG01798,HG01801,HG01804,HG01807,HG01813,HG01816,HG01840,HG01841,HG01842,HG01843,HG01844,HG01849,HG01852,HG01855,HG01857,HG01858,HG01861,HG01862,HG01864,HG01865,HG01866,HG01869,HG01870,HG01878,HG01882,HG01883,HG01885,HG01892,HG01894,HG01896,HG01912,HG01939,HG01951,HG01956,HG01974,HG01976,HG01997,HG02003,HG02006,HG02009,HG02010,HG02012,HG02013,HG02023,HG02025,HG02026,HG02029,HG02031,HG02032,HG02048,HG02050,HG02053,HG02054,HG02058,HG02061,HG02064,HG02067,HG02069,HG02072,HG02073,HG02076,HG02078,HG02081,HG02084,HG02085,HG02087,HG02102,HG02108,HG02111,HG02113,HG02116,HG02121,HG02127,HG02128,HG02130,HG02131,HG02137,HG02144,HG02146,HG02147,HG02150,HG02151,HG02152,HG02153,HG02154,HG02155,HG02164,HG02165,HG02166,HG02178,HG02181,HG02184,HG02186,HG02188,HG02221,HG02230,HG02232,HG02233,HG02235,HG02238,HG02239,HG02252,HG02253,HG02255,HG02256,HG02259,HG02260,HG02265,HG02266,HG02271,HG02272,HG02274,HG02275,HG02282,HG02283,HG02284,HG02298,HG02299,HG02301,HG02314,HG02315,HG02317,HG02330,HG02332,HG02334,HG02337,HG02343,HG02348,HG02353,HG02355,HG02360,HG02375,HG02379,HG02382,HG02383,HG02384,HG02386,HG02392,HG02395,HG02397,HG02406,HG02410,HG02419,HG02420,HG02429,HG02433,HG02439,HG02450,HG02461,HG02462,HG02464,HG02470,HG02479,HG02484,HG02490,HG02491,HG02493,HG02502,HG02508,HG02512,HG02537,HG02549,HG02555,HG02561,HG02571,HG02573,HG02574,HG02589,HG02594,HG02595,HG02597,HG02604,HG02610,HG02613,HG02614,HG02620,HG02623,HG02624,HG02629,HG02642,HG02645,HG02652,HG02657,HG02658,HG02660,HG02666,HG02702,HG02703,HG02716,HG02722,HG02731,HG02734,HG02759,HG02760,HG02768,HG02775,HG02783,HG02790,HG02798,HG02799,HG02804,HG02807,HG02808,HG02811,HG02813,HG02817,HG02820,HG02840,HG02852,HG02879,HG02882,HG02884,HG02887,HG02890,HG02922,HG02923,HG02943,HG02944,HG02947,HG02973,HG02974,HG02977,HG02983,HG03006,HG03007,HG03012,HG03028,HG03040,HG03055,HG03057,HG03060,HG03061,HG03063,HG03064,HG03072,HG03077,HG03082,HG03084,HG03085,HG03095,HG03096,HG03108,HG03111,HG03112,HG03120,HG03121,HG03123,HG03124,HG03126,HG03129,HG03130,HG03136,HG03159,HG03162,HG03163,HG03166,HG03168,HG03172,HG03175,HG03193,HG03195,HG03196,HG03198,HG03199,HG03202,HG03224,HG03234,HG03235,HG03238,HG03246,HG03247,HG03258,HG03259,HG03265,HG03267,HG03268,HG03271,HG03279,HG03291,HG03294,HG03297,HG03298,HG03300,HG03303,HG03304,HG03311,HG03342,HG03343,HG03363,HG03366,HG03378,HG03380,HG03391,HG03401,HG03419,HG03428,HG03433,HG03442,HG03445,HG03446,HG03457,HG03458,HG03461,HG03470,HG03476,HG03484,HG03511,HG03514,HG03520,HG03538,HG03547,HG03556,HG03563,HG03571,HG03572,HG03575,HG03578,HG03583,HG03607,HG03616,HG03625,HG03629,HG03634,HG03640,HG03645,HG03689,HG03697,HG03702,HG03705,HG03706,HG03708,HG03717,HG03718,HG03722,HG03738,HG03740,HG03762,HG03765,HG03767,HG03771,HG03772,HG03774,HG03777,HG03778,HG03781,HG03787,HG03790,HG03792,HG03803,HG03812,HG03815,HG03817,HG03821,HG03832,HG03833,HG03849,HG03850,HG03856,HG03869,HG03874,HG03886,HG03890,HG03898,HG03902,HG03907,HG03917,HG03926,HG03940,HG03941,HG03967,HG03976,HG03977,HG03995,HG03999,HG04001,HG04002,HG04014,HG04018,HG04029,HG04033,HG04056,HG04070,HG04080,HG04094,HG04096,HG04106,HG04118,HG04134,HG04140,HG04146,HG04155,HG04188,HG04189,HG04200,HG04209,HG04211,HG04216,HG04219,HG04225,HG04227,HG04238,NA06994,NA07048,NA07056,NA11829,NA11843,NA11893,NA11930,NA12004,NA12006,NA12044,NA12156,NA12249,NA12275,NA12283,NA12413,NA12718,NA12761,NA12777,NA12843,NA12872,NA12873,NA12878,NA12889,NA18488,NA18489,NA18498,NA18499,NA18501,NA18505,NA18507,NA18508,NA18511,NA18516,NA18517,NA18519,NA18520,NA18522,NA18526,NA18528,NA18530,NA18531,NA18534,NA18535,NA18537,NA18542,NA18546,NA18559,NA18560,NA18564,NA18567,NA18571,NA18574,NA18577,NA18579,NA18591,NA18596,NA18597,NA18602,NA18603,NA18606,NA18612,NA18614,NA18617,NA18618,NA18620,NA18622,NA18623,NA18625,NA18626,NA18627,NA18628,NA18629,NA18630,NA18631,NA18638,NA18639,NA18640,NA18641,NA18643,NA18645,NA18648,NA18740,NA18745,NA18748,NA18749,NA18757,NA18858,NA18864,NA18865,NA18867,NA18874,NA18878,NA18881,NA18907,NA18909,NA18910,NA18915,NA18916,NA18934,NA18939,NA18940,NA18942,NA18944,NA18945,NA18949,NA18950,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18962,NA18968,NA18969,NA18971,NA18974,NA18975,NA18977,NA18979,NA18980,NA18981,NA18990,NA18992,NA18994,NA18995,NA18998,NA18999,NA19002,NA19003,NA19004,NA19005,NA19007,NA19017,NA19019,NA19024,NA19026,NA19027,NA19028,NA19030,NA19031,NA19037,NA19038,NA19043,NA19054,NA19056,NA19058,NA19062,NA19063,NA19064,NA19067,NA19072,NA19077,NA19079,NA19080,NA19081,NA19082,NA19084,NA19085,NA19086,NA19087,NA19088,NA19090,NA19092,NA19093,NA19098,NA19113,NA19118,NA19119,NA19121,NA19130,NA19137,NA19138,NA19141,NA19143,NA19146,NA19147,NA19152,NA19159,NA19160,NA19175,NA19184,NA19190,NA19200,NA19204,NA19207,NA19209,NA19213,NA19214,NA19238,NA19239,NA19247,NA19248,NA19256,NA19257,NA19307,NA19308,NA19314,NA19315,NA19316,NA19317,NA19318,NA19319,NA19320,NA19321,NA19323,NA19324,NA19328,NA19331,NA19334,NA19347,NA19350,NA19351,NA19355,NA19372,NA19375,NA19376,NA19378,NA19380,NA19383,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19404,NA19429,NA19430,NA19436,NA19438,NA19443,NA19446,NA19448,NA19449,NA19451,NA19452,NA19455,NA19456,NA19461,NA19463,NA19466,NA19467,NA19468,NA19471,NA19472,NA19473,NA19649,NA19654,NA19655,NA19657,NA19663,NA19664,NA19670,NA19679,NA19681,NA19682,NA19684,NA19703,NA19707,NA19711,NA19717,NA19719,NA19723,NA19726,NA19731,NA19732,NA19735,NA19741,NA19749,NA19759,NA19764,NA19777,NA19786,NA19792,NA19795,NA19818,NA19819,NA19835,NA19900,NA19901,NA19916,NA19920,NA19982,NA20276,NA20281,NA20282,NA20296,NA20298,NA20317,NA20320,NA20321,NA20334,NA20340,NA20342,NA20355,NA20357,NA20359,NA20503,NA20508,NA20509,NA20522,NA20524,NA20530,NA20531,NA20534,NA20539,NA20542,NA20543,NA20586,NA20753,NA20757,NA20758,NA20760,NA20761,NA20767,NA20785,NA20801,NA20802,NA20803,NA20804,NA20806,NA20808,NA20809,NA20813,NA20814,NA20819,NA20826,NA20827,NA20846,NA20849,NA20850,NA20851,NA20853,NA20864,NA20869,NA20877,NA20884,NA20894,NA20896,NA20897,NA20899,NA20901,NA20902,NA20903,NA20905,NA20908,NA21088,NA21090,NA21091,NA21095,NA21099,NA21103,NA21108,NA21109,NA21111,NA21114,NA21116,NA21122,NA21123,NA21125,NA21127,NA21135,NA21141,NA21142,NA21143,NA21144 esv2743608 1 9595457 9597665 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6744927,essv6679158,essv6742129,essv6759034,essv6714234,essv6784488,essv6748231,essv6718832,essv6718821,essv6916607,essv6816654,essv6761846,essv6910033,essv6750588,essv6733474,essv6721998,essv6937670,essv6874695,essv6756544,essv6764149 M 96 0 19 "" SSM003,SSM007,SSM008,SSM009,SSM010,SSM015,SSM022,SSM033,SSM043,SSM045,SSM049,SSM053,SSM055,SSM057,SSM059,SSM061,SSM062,SSM063,SSM092 nsv1073989 1 9595599 9597700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772053 M 1 0 1 "" KWP1 esv2666637 1 9595612 9597666 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5914429,essv6055603,essv5914542,essv6520532,essv5683474,essv6538085,essv5454005,essv6591424,essv5629956,essv6547728,essv5750620,essv6520259,essv5527703,essv6528203,essv5572624,essv6475668,essv5459265,essv6405803,essv5442803,essv6054306,essv5462748,essv6414978,essv5524302,essv6246538,essv5646574,essv6416876,essv5546164,essv5978811,essv5854863,essv6419394,essv5906162,essv5928034,essv5644461,essv6510724,essv5588201,essv6563175,essv5757075,essv6464974,essv5573133,essv6295407,essv5725552,essv6545500,essv5851346,essv6579350,essv5509662,essv6117717,essv5748588,essv6438640,essv5460453,essv6153640,essv5624447,essv6587994,essv5792062,essv6165464,essv5817852,essv6080202,essv5876905,essv6443580,essv5673031,essv6525440,essv5524841,essv6455193,essv5863475,essv6293735,essv5699651,essv6213567,essv5487347,essv6285075,essv5401906,essv6084655,essv5673208,essv6012734,essv5693721,essv5916025,essv5441131,essv5948513,essv5855519,essv6010936,essv5729759,essv6024779,essv5676778,essv6260032,essv5904380,essv5983730,essv5590412,essv6587272,essv5585645,essv6305789,essv5703400,essv6039895,essv5507614,essv6217789,essv5559182,essv5969273,essv5747117,essv6541409,essv5745120,essv5997424,essv5503240,essv6187086,essv5617752,essv6216034,essv5578756,essv6039710,essv5528227,essv6156214,essv5612888,essv6114540,essv5500317,essv6016837,essv5761664,essv6319968,essv5898392,essv6489236,essv5869329,essv5979472,essv5477603,essv6473056,essv5402926,essv6487294,essv5431428,essv5949081,essv5726125,essv6023935,essv5639628,essv6496599,essv5700797,essv6556181,essv5599325,essv6020131,essv5706065,essv5992767,essv5579610,essv6230142,essv5508025,essv6481306,essv5550012,essv6332118,essv5599356,essv6336274,essv5526813,essv6564173,essv5833999,essv6501221,essv5457282,essv6340793,essv5499670,essv6238842,essv5412360,essv6060597,essv5466430,essv6341641,essv5424861,essv6017923,essv5611294,essv6071094,essv5712137,essv6561264,essv5809168,essv6542241,essv5621312,essv6264189,essv5656239,essv5996627,essv5855300,essv6352752,essv5521458,essv6077547,essv5513388,essv5956608,essv5807091,essv5923143,essv6358998,essv6467205,essv6060052,essv6042370,essv6069973,essv6135014,essv6362657,essv6049171,essv6363620,essv6120919,essv6082670,essv6159056,essv6597098,essv6149150,essv6368599,essv6369639,essv5993111,essv6373430,essv6373691,essv6375360,essv6144493,essv6473109,essv6274153,essv5995200,essv6380723 M 1151 0 197 "" HG00114,HG00116,HG00126,HG00131,HG00156,HG00159,HG00180,HG00182,HG00183,HG00186,HG00190,HG00237,HG00245,HG00249,HG00259,HG00266,HG00269,HG00271,HG00276,HG00280,HG00281,HG00313,HG00315,HG00320,HG00323,HG00325,HG00326,HG00329,HG00337,HG00373,HG00403,HG00418,HG00421,HG00436,HG00437,HG00448,HG00449,HG00464,HG00525,HG00531,HG00536,HG00559,HG00560,HG00589,HG00596,HG00611,HG00613,HG00620,HG00625,HG00626,HG00628,HG00629,HG00637,HG00651,HG00654,HG00656,HG00671,HG00689,HG00699,HG00701,HG01079,HG01101,HG01124,HG01197,HG01465,HG01488,NA07048,NA11843,NA11930,NA12249,NA12275,NA12889,NA18489,NA18498,NA18516,NA18520,NA18522,NA18530,NA18534,NA18535,NA18559,NA18560,NA18564,NA18567,NA18574,NA18579,NA18596,NA18597,NA18602,NA18603,NA18606,NA18617,NA18618,NA18622,NA18623,NA18626,NA18627,NA18628,NA18630,NA18631,NA18867,NA18874,NA18910,NA18950,NA18959,NA18980,NA18999,NA19003,NA19004,NA19007,NA19054,NA19056,NA19058,NA19062,NA19063,NA19064,NA19067,NA19082,NA19085,NA19130,NA19138,NA19213,NA19247,NA19248,NA19256,NA19316,NA19318,NA19319,NA19321,NA19324,NA19328,NA19331,NA19334,NA19350,NA19372,NA19376,NA19380,NA19383,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19398,NA19404,NA19430,NA19436,NA19446,NA19448,NA19456,NA19463,NA19471,NA19472,NA19654,NA19655,NA19657,NA19663,NA19679,NA19681,NA19682,NA19684,NA19703,NA19707,NA19711,NA19717,NA19719,NA19723,NA19726,NA19731,NA19749,NA19777,NA19818,NA19819,NA19835,NA19900,NA19901,NA19916,NA19920,NA19982,NA20276,NA20282,NA20317,NA20340,NA20341,NA20508,NA20509,NA20522,NA20530,NA20586,NA20753,NA20758,NA20761,NA20785,NA20802,NA20816,NA20819 esv3543455 1 9595612 9597728 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9742202 M 767 0 1 "" nsv957944 1 9595632 9597645 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005160 M 1 0 1 "" BILGI_BIOE esv28451 1 9596173 9597928 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11914,esv15031 M 40 0 5 "" NA18505,NA18907,NA19147,NA19190,NA19257 dgv98n54 1 9596385 9596971 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545364,nsv545368,nsv545365 M 17421 0 25 "" dgv99n54 1 9596385 9597415 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545367,nsv545369,nsv545366 M 17421 0 3 "" dgv100n54 1 9596673 9597885 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545374,nsv545370,nsv545376,nsv545375 M 17421 5 0 "" dgv101n54 1 9596766 9596971 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545371,nsv545372 M 17421 0 6 "" nsv545373 1 9596766 9597728 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709707 M 17421 0 1 "" nsv2076 1 9597218 9631433 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3078 M 9 1 0 SLC25A33 NA18555 nsv545377 1 9597237 9602962 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709712 M 17421 1 0 SLC25A33 esv2658500 1 9603985 9608653 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5603879 M 1151 0 1 SLC25A33 NA19725 esv3585180 1 9604082 9608570 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851223 M 2504 0 1 SLC25A33 NA19725 esv3585181 1 9620016 9622208 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851224 M 2504 0 1 SLC25A33 HG01351 esv2660900 1 9620053 9622149 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5875165 M 1151 0 1 SLC25A33 HG01351 nsv945765 1 9633634 9639115 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753475,nssv1754743,nssv1753474,nssv1754785,nssv1753461,nssv1754762,nssv1753491,nssv1754748,nssv1754774,nssv1754759,nssv1753481,nssv1753487,nssv1754771,nssv1753483,nssv1753471,nssv1754781,nssv1754775,nssv1754747,nssv1753477,nssv1754745,nssv1753469,nssv1754763,nssv1753480,nssv1754779,nssv1754778,nssv1754742,nssv1753462,nssv1754788,nssv1753467,nssv1754752,nssv1753470,nssv1754739,nssv1754776,nssv1754767,nssv1753478,nssv1754761,nssv1753472,nssv1754726,nssv1754773,nssv1754730,nssv1753473,nssv1754749,nssv1753488,nssv1754724,nssv1753479,nssv1754751,nssv1753464,nssv1753485,nssv1754770,nssv1754728,nssv1753463,nssv1754732,nssv1754772,nssv1754787,nssv1754769,nssv1754764,nssv1754777,nssv1754729,nssv1753466,nssv1754736,nssv1753465,nssv1754782,nssv1753476,nssv1754731,nssv1753484,nssv1754780,nssv1753489,nssv1754783,nssv1753468,nssv1754754,nssv1753482,nssv1754758,nssv1754741,nssv1753490,nssv1754725,nssv1754760,nssv1753486,nssv1753460,nssv1754746,nssv1754733,nssv1754735,nssv1754755,nssv1754756,nssv1754738,nssv1754766,nssv1754727,nssv1754757,nssv1754768,nssv1754744,nssv1754750,nssv1754737,nssv1754784,nssv1754765,nssv1754786,nssv1754753,nssv1754740,nssv1754734 M 97 10 0 SLC25A33 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474814 1 9644646 9644646 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018493 M 9 1 0 "" NA18956 nsv1118098 1 9648700 9649300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980317 M 2 0 1 TMEM201 KWS1 esv2743619 1 9652507 9652933 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6929053,essv6950542 M 96 0 2 TMEM201 SSM020,SSM025 nsv2187 1 9667296 9693750 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1500,nssv3119,nssv3334,nssv6883,nssv4948,nssv10282,nssv9906 M 9 7 0 TMEM201 NA12156,NA12878,NA18507,NA18555,NA18956,NA19129,NA19240 nsv508847 1 9672195 9738889 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619767,nssv623772,nssv621081 M 4 3 0 C1orf200,PIK3CD,TMEM201 NA10860,NA15510,NA18994 esv1010171 1 9684008 9685520 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565355 M 3 1 0 "" HuRef nsv1136030 1 9685182 9688695 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989634 M 2 0 1 "" KWS2 nsv1122294 1 9702584 9702646 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969745 M 2 0 1 "" KWS2 esv3585184 1 9720878 9733089 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851314 M 2504 0 1 PIK3CD HG01578 nsv832203 1 9726632 9860209 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442685 M 95 0 1 CLSTN1,PIK3CD esv3585185 1 9730089 9752220 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851315 M 2504 1 0 PIK3CD HG01867 esv3585186 1 9730509 9736935 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851316 M 2504 0 1 PIK3CD HG02082 esv3302499 1 9740349 9740565 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731291,essv7731648,essv7730969 M 185 0 0 PIK3CD NA19238,NA19239,NA19240 esv3377271 1 9740362 9740576 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670923,essv8670925,essv8670924 M 185 3 0 PIK3CD NA19238,NA19239,NA19240 nsv1118099 1 9749500 9750000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980318 M 2 0 1 PIK3CD KWS1 nsv1077042 1 9749599 9750100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771611 M 1 0 1 PIK3CD KWP1 nsv160151 1 9762596 9766108 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178729 M 24 PIK3CD nsv1137726 1 9768668 9768736 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990234 M 2 0 1 PIK3CD KWS2 nsv1126975 1 9768725 9768779 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985263 M 2 0 1 PIK3CD KWS1 nsv1126976 1 9805856 9805930 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985264 M 2 0 1 CLSTN1 KWS1 esv3543788 1 9817000 9817546 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9742535 M 767 0 1 CLSTN1 esv2662594 1 9817083 9817546 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5605258,essv6552130,essv6434280,essv6053227 M 1151 0 4 CLSTN1 HG00133,HG00319,HG01072,NA11893 esv2656500 1 9822241 9825839 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6302894 M 1151 0 1 CLSTN1 HG00419 esv3585187 1 9822323 9825846 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851317,essv9851318 M 2504 0 2 CLSTN1 HG00419,HG01805 esv3543899 1 9822722 9822849 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9742646 M 767 0 1 CLSTN1 nsv827364 1 9822732 9825197 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431975 M 31 0 1 CLSTN1 NA18972 nsv2298 1 9826286 9857487 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10302 M 9 0 1 CLSTN1 NA18956 nsv1076086 1 9828299 9829100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769632 M 1 0 1 CLSTN1 KWP1 esv3577725 1 9844762 9855709 CNV loss Uddin_et_al_2014 25503493 SNP array essv9795533,essv9795644 M 873 0 2 CLSTN1 400837HN,400987FB esv3585188 1 9846036 9856679 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851512,essv9851513,essv9851514,essv9851515,essv9851511,essv9851510,essv9851509,essv9851508,essv9851422,essv9851357,essv9851324,essv9851507,essv9851323,essv9851322,essv9851321,essv9851320,essv9851319,essv9851327,essv9851356,essv9851326,essv9851339,essv9851325,essv9851330,essv9851329,essv9851328,essv9851338,essv9851333,essv9851332,essv9851331,essv9851334,essv9851337,essv9851336,essv9851335,essv9851341,essv9851346,essv9851340,essv9851355,essv9851345,essv9851342,essv9851344,essv9851343,essv9851349,essv9851354,essv9851348,essv9851347,essv9851350,essv9851353,essv9851352,essv9851351,essv9851371,essv9851362,essv9851388,essv9851421,essv9851359,essv9851358,essv9851361,essv9851360,essv9851370,essv9851363,essv9851365,essv9851364,essv9851369,essv9851366,essv9851368,essv9851367,essv9851373,essv9851387,essv9851372,essv9851378,essv9851377,essv9851374,essv9851376,essv9851375,essv9851381,essv9851386,essv9851380,essv9851379,essv9851382,essv9851385,essv9851384,essv9851383,essv9851394,essv9851389,essv9851403,essv9851420,essv9851393,essv9851390,essv9851392,essv9851391,essv9851395,essv9851402,essv9851397,essv9851396,essv9851398,essv9851401,essv9851400,essv9851399,essv9851410,essv9851405,essv9851419,essv9851404,essv9851409,essv9851406,essv9851408,essv9851407,essv9851413,essv9851418,essv9851412,essv9851411,essv9851417,essv9851414,essv9851416,essv9851415,essv9851482,essv9851423,essv9851506,essv9851449,essv9851432,essv9851431,essv9851426,essv9851425,essv9851424,essv9851430,essv9851427,essv9851429,essv9851428,essv9851434,essv9851448,essv9851439,essv9851433,essv9851438,essv9851435,essv9851437,essv9851436,essv9851440,essv9851447,essv9851442,essv9851441,essv9851446,essv9851443,essv9851445,essv9851444,essv9851450,essv9851455,essv9851464,essv9851481,essv9851451,essv9851454,essv9851453,essv9851452,essv9851463,essv9851458,essv9851457,essv9851456,essv9851459,essv9851462,essv9851461,essv9851460,essv9851471,essv9851466,essv9851480,essv9851465,essv9851470,essv9851467,essv9851469,essv9851468,essv9851474,essv9851479,essv9851473,essv9851472,essv9851475,essv9851478,essv9851477,essv9851476,essv9851505,essv9851492,essv9851483,essv9851504,essv9851491,essv9851485,essv9851484,essv9851486,essv9851490,essv9851487,essv9851489,essv9851488,essv9851498,essv9851503,essv9851493,essv9851494,essv9851497,essv9851495,essv9851496,essv9851502,essv9851500,essv9851499,essv9851501,essv9851568,essv9851567,essv9851533,essv9851516,essv9851566,essv9851518,essv9851523,essv9851532,essv9851517,essv9851522,essv9851519,essv9851521,essv9851520,essv9851531,essv9851526,essv9851525,essv9851524,essv9851530,essv9851527,essv9851529,essv9851528,essv9851535,essv9851548,essv9851539,essv9851534,essv9851538,essv9851565,essv9851537,essv9851536,essv9851547,essv9851541,essv9851540,essv9851542,essv9851546,essv9851543,essv9851544,essv9851545,essv9851564,essv9851555,essv9851550,essv9851549,essv9851554,essv9851551,essv9851553,essv9851552,essv9851558,essv9851563,essv9851557,essv9851556,essv9851559,essv9851562,essv9851561,essv9851560,essv9851580,essv9851572,essv9851597,essv9851570,essv9851569,essv9851571,essv9851579,essv9851574,essv9851573,essv9851575,essv9851578,essv9851577,essv9851576,essv9851587,essv9851582,essv9851596,essv9851581,essv9851586,essv9851583,essv9851585,essv9851584,essv9851588,essv9851595,essv9851590,essv9851589,essv9851594,essv9851591,essv9851592,essv9851593,essv9851598,essv9851603,essv9851599,essv9851602,essv9851601,essv9851600,essv9851611,essv9851606,essv9851605,essv9851604,essv9851607,essv9851610,essv9851609,essv9851608 M 2504 0 293 CLSTN1 HG00171,HG00266,HG00353,HG00404,HG00406,HG00409,HG00422,HG00449,HG00457,HG00513,HG00533,HG00536,HG00553,HG00559,HG00560,HG00592,HG00593,HG00614,HG00628,HG00629,HG00651,HG00654,HG00672,HG00683,HG00684,HG00689,HG00699,HG00707,HG00708,HG00717,HG00759,HG00844,HG00851,HG00867,HG00978,HG01046,HG01048,HG01101,HG01162,HG01177,HG01257,HG01281,HG01305,HG01308,HG01341,HG01344,HG01348,HG01360,HG01398,HG01412,HG01443,HG01447,HG01462,HG01495,HG01571,HG01572,HG01589,HG01805,HG01810,HG01840,HG01841,HG01853,HG01862,HG01866,HG01893,HG01918,HG01921,HG01924,HG01927,HG01932,HG01935,HG01939,HG01947,HG01953,HG01954,HG01974,HG01976,HG01982,HG01997,HG02040,HG02047,HG02048,HG02060,HG02085,HG02086,HG02104,HG02121,HG02137,HG02146,HG02150,HG02166,HG02186,HG02187,HG02265,HG02266,HG02271,HG02272,HG02275,HG02277,HG02291,HG02298,HG02299,HG02301,HG02348,HG02380,HG02382,HG02384,HG02389,HG02513,HG02522,HG02603,HG02688,HG02690,HG02724,HG02727,HG02736,HG02774,HG02783,HG02784,HG02787,HG02789,HG02792,HG02793,HG03021,HG03228,HG03229,HG03237,HG03603,HG03631,HG03640,HG03644,HG03645,HG03646,HG03679,HG03684,HG03690,HG03693,HG03694,HG03696,HG03709,HG03731,HG03736,HG03738,HG03742,HG03746,HG03750,HG03754,HG03755,HG03762,HG03789,HG03792,HG03793,HG03796,HG03803,HG03809,HG03829,HG03836,HG03846,HG03849,HG03850,HG03851,HG03862,HG03867,HG03868,HG03869,HG03872,HG03900,HG03910,HG03916,HG03920,HG03937,HG03944,HG03947,HG03960,HG03967,HG03968,HG03976,HG03978,HG03985,HG04006,HG04015,HG04023,HG04026,HG04035,HG04039,HG04060,HG04061,HG04062,HG04070,HG04100,HG04144,HG04173,HG04177,HG04180,HG04182,HG04185,HG04189,HG04225,HG04227,NA18526,NA18528,NA18530,NA18532,NA18548,NA18550,NA18558,NA18564,NA18570,NA18572,NA18611,NA18619,NA18620,NA18622,NA18623,NA18624,NA18627,NA18635,NA18636,NA18757,NA18949,NA18956,NA18959,NA18965,NA18971,NA18979,NA18980,NA19010,NA19054,NA19060,NA19066,NA19072,NA19074,NA19079,NA19080,NA19083,NA19085,NA19088,NA19443,NA19649,NA19657,NA19664,NA19681,NA19682,NA19723,NA19729,NA19731,NA19735,NA19755,NA19758,NA19762,NA19770,NA19777,NA19786,NA19794,NA19795,NA20845,NA20849,NA20850,NA20851,NA20853,NA20859,NA20861,NA20863,NA20868,NA20874,NA20875,NA20876,NA20882,NA20889,NA20895,NA20908,NA21086,NA21091,NA21093,NA21095,NA21098,NA21100,NA21103,NA21108,NA21110,NA21114,NA21117,NA21119,NA21120,NA21122,NA21123,NA21126,NA21127,NA21129,NA21130,NA21135,NA21141,NA21142 esv2743630 1 9846472 9856680 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961542,essv6679159,essv6742130,essv6714235,essv6913992,essv6698597,essv6748242,essv6747767,essv6816573,essv6816665,essv6972326,essv6804396,essv6766533,essv6876687,essv6738802 M 96 0 15 CLSTN1 SSM001,SSM008,SSM010,SSM012,SSM016,SSM027,SSM029,SSM033,SSM043,SSM052,SSM053,SSM056,SSM064,SSM074,SSM078 dgv11n67 1 9846555 9857371 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827697,nsv827586,nsv827475 M 31 0 4 CLSTN1 NA18526,NA18564,NA18570,NA18949 nsv498662 1 9846650 9856696 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585382 M 9 0 1 CLSTN1 esv2669918 1 9846654 9856699 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5819439,essv6384429,essv5990582,essv6404227,essv5746601,essv6015122,essv5440005,essv6563862,essv5451602,essv6221622,essv5731939,essv6481244,essv5811060,essv6457439,essv5521177,essv6452807,essv5830820,essv6071153,essv5834532,essv6020100,essv5900305,essv6023646,essv5455284,essv6265102,essv5926048,essv6597647,essv5424404,essv6321976,essv5888817,essv6112364,essv5512061,essv6204692,essv5893909,essv6204173,essv5825339,essv6069091,essv5988798,essv6003916,essv5931310,essv6349005,essv5893923,essv6349803,essv5530245,essv6207730,essv5923115,essv6368303,essv5432791,essv6161342,essv5845659,essv6373017,essv5549078,essv6235297,essv5628746,essv6393642,essv5548943,essv5617550,essv5834659,essv5714073,essv5789363,essv5505390,essv5462473,essv5839652 M 1151 0 62 CLSTN1 HG00171,HG00353,HG00422,HG00449,HG00501,HG00513,HG00533,HG00536,HG00537,HG00559,HG00560,HG00592,HG00614,HG00628,HG00629,HG00651,HG00654,HG00672,HG00683,HG00684,HG00689,HG00699,HG00707,HG01048,HG01101,HG01360,HG01462,HG01495,NA18530,NA18548,NA18550,NA18558,NA18572,NA18576,NA18611,NA18619,NA18620,NA18622,NA18623,NA18624,NA18635,NA18636,NA19010,NA19054,NA19060,NA19066,NA19072,NA19074,NA19079,NA19080,NA19083,NA19085,NA19088,NA19371,NA19443,NA19657,NA19664,NA19681,NA19682,NA19723,NA19731,NA19777 dgv102n54 1 9847032 9856687 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545378,nsv545379 M 17421 0 2 CLSTN1 dgv14e212 1 9849094 9855709 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577724,esv3577726 M 873 0 4 CLSTN1 400411TG,400553PP,400739SS,401952UH nsv1137727 1 9858183 9858235 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990235 M 2 0 1 CLSTN1 KWS2 esv2669984 1 9870710 9873100 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6394000 M 1151 0 1 CLSTN1 NA20810 esv3585189 1 9891824 9892736 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851612 M 2504 0 1 "" HG02537 nsv545380 1 9918183 9987007 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709715 M 17421 0 1 CTNNBIP1 nsv1112518 1 9970100 9970400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966618 M 2 0 1 CTNNBIP1 KWS2 nsv1001742 1 9971776 10116767 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481106 M 29084 1 0 LZIC,NMNAT1,RBP7,UBE4B esv2676301 1 9975537 9980263 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6535570 M 1151 0 1 "" HG00607 esv3585191 1 9975577 9980237 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851625 M 2504 0 1 "" HG00607 nsv1133808 1 10048174 10048237 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969379 M 2 0 1 "" KWS2 esv2667343 1 10052695 10063265 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6049608 M 1151 0 1 RBP7 HG01366 esv3585192 1 10052713 10063234 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851626 M 2504 0 1 RBP7 HG01366 esv2671412 1 10067122 10068790 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6220396,essv5525821 M 1151 0 2 RBP7 NA19818,NA19835 esv3585193 1 10067190 10068675 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851630,essv9851629,essv9851628,essv9851627,essv9851635,essv9851634,essv9851631,essv9851633,essv9851632,essv9851638,essv9851637,essv9851636,essv9851639,essv9851640 M 2504 0 14 RBP7 HG01551,HG02703,HG02836,HG02870,HG02887,HG03294,HG03372,HG03410,HG03499,NA19072,NA19818,NA19835,NA20332,NA20351 esv2664618 1 10067981 10072312 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5774562 M 1151 0 1 RBP7 HG00641 esv3585194 1 10068048 10072196 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851641 M 2504 0 1 RBP7 HG00641 esv3336969 1 10072964 10072964 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740981 M 185 1 0 RBP7 NA19240 esv3577728 1 10090712 10102999 CNV loss Uddin_et_al_2014 25503493 SNP array essv9796199 M 873 0 1 UBE4B 400547BS nsv527217 1 10093457 10257167 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703617 M 2026 1 0 UBE4B dgv12e199 1 10095936 10103825 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2671667,esv2663179 M 1151 0 2 UBE4B HG00139,NA11892 esv3585195 1 10096652 10102949 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851643,essv9851642 M 2504 0 2 UBE4B HG00139,NA11892 dgv15e212 1 10097007 10102999 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577731,esv3577729,esv3577730 M 873 0 3 UBE4B 401251WN,401589HP,402048WB nsv945766 1 10112529 10115229 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754793,nssv1754842,nssv1754872,nssv1754824,nssv1754797,nssv1754862,nssv1754871,nssv1754814,nssv1754798,nssv1754845,nssv1754790,nssv1754856,nssv1754809,nssv1754865,nssv1754811,nssv1754883,nssv1754868,nssv1754861,nssv1754817,nssv1754847,nssv1754873,nssv1754850,nssv1754806,nssv1754881,nssv1754810,nssv1754859,nssv1754875,nssv1754844,nssv1754820,nssv1754843,nssv1754874,nssv1754830,nssv1754804,nssv1754841,nssv1754796,nssv1754880,nssv1754808,nssv1754834,nssv1754800,nssv1754876,nssv1754813,nssv1754857,nssv1754870,nssv1754878,nssv1754803,nssv1754789,nssv1754869,nssv1754885,nssv1754794,nssv1754864,nssv1754867,nssv1754812,nssv1754802,nssv1754860,nssv1754807,nssv1754831,nssv1754866,nssv1754839,nssv1754791,nssv1754882,nssv1754799,nssv1754848,nssv1754818,nssv1754836,nssv1754801,nssv1754849,nssv1754792,nssv1754825,nssv1754795,nssv1754855,nssv1754805,nssv1754846,nssv1754858,nssv1754826,nssv1754877,nssv1754833,nssv1754823,nssv1754828,nssv1754821,nssv1754816,nssv1754884,nssv1754827,nssv1754838,nssv1754837,nssv1754840,nssv1754879,nssv1754822,nssv1754835,nssv1754852,nssv1754815,nssv1754832,nssv1754851,nssv1754854,nssv1754863,nssv1754829,nssv1754819,nssv1754853 M 97 10 0 UBE4B HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522629 1 10125765 10239197 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv706027 M 2026 1 0 UBE4B esv3890748 1 10153153 10230506 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25787927 M 3017 1 0 UBE4B esv3544010 1 10161480 10161553 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9742757 M 767 0 1 UBE4B esv2668231 1 10195645 10196153 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6392345,essv5651943,essv6424150,essv5749006,essv6159229,essv5914513,essv6456159,essv5668584,essv6497289,essv5784275,essv6078091,essv5937528,essv6585488,essv5905869,essv6164323,essv5671433,essv6165979,essv6203017,essv6120065,essv6380147,essv6385363 M 1151 0 21 UBE4B HG00428,NA12003,NA12717,NA18488,NA18522,NA18533,NA18563,NA18593,NA18856,NA19004,NA19085,NA19107,NA19189,NA19235,NA19472,NA19473,NA19701,NA19834,NA19982,NA20503,NA20765 nsv525216 1 10195940 10200574 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701302 M 2026 1 0 UBE4B esv2562286 1 10230395 10231752 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5304967 M 1 0 1 UBE4B NA18507 nsv1145319 1 10237347 10237399 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982413 M 2 0 1 UBE4B KWS1 esv2758920 1 10238070 10582554 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757722 M 270 1 2 APITD1,APITD1-CORT,CORT,DFFA,KIF1B,PEX14,PGD,UBE4B NA18912,NA18965,NA19130 esv3585196 1 10245266 10250945 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851644 M 2504 0 1 "" HG02561 nsv512718 1 10247608 10248075 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625342 M 1 1 0 "" 1 esv3585197 1 10249536 10252077 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851695,essv9851661,essv9851694,essv9851651,essv9851646,essv9851660,essv9851645,essv9851650,essv9851647,essv9851649,essv9851648,essv9851654,essv9851659,essv9851653,essv9851652,essv9851655,essv9851658,essv9851657,essv9851656,essv9851693,essv9851676,essv9851667,essv9851666,essv9851662,essv9851663,essv9851665,essv9851664,essv9851670,essv9851675,essv9851669,essv9851668,essv9851671,essv9851674,essv9851673,essv9851672,essv9851678,essv9851683,essv9851692,essv9851677,essv9851682,essv9851679,essv9851681,essv9851680,essv9851686,essv9851691,essv9851685,essv9851684,essv9851690,essv9851687,essv9851689,essv9851688,essv9851708,essv9851699,essv9851725,essv9851698,essv9851696,essv9851697,essv9851707,essv9851702,essv9851701,essv9851700,essv9851703,essv9851706,essv9851705,essv9851704,essv9851710,essv9851724,essv9851715,essv9851709,essv9851714,essv9851711,essv9851713,essv9851712,essv9851718,essv9851723,essv9851717,essv9851716,essv9851719,essv9851722,essv9851721,essv9851720,essv9851726,essv9851731,essv9851727,essv9851730,essv9851729,essv9851728,essv9851733,essv9851732 M 2504 0 89 "" HG01140,HG01205,HG01348,HG01455,HG01882,HG01885,HG01889,HG01890,HG01896,HG01914,HG02012,HG02014,HG02255,HG02315,HG02323,HG02334,HG02427,HG02445,HG02470,HG02476,HG02496,HG02554,HG02562,HG02570,HG02574,HG02577,HG02586,HG02628,HG02635,HG02645,HG02678,HG02759,HG02769,HG02798,HG02799,HG02804,HG02814,HG02820,HG02891,HG02938,HG02941,HG02947,HG03072,HG03100,HG03105,HG03120,HG03121,HG03127,HG03159,HG03166,HG03246,HG03247,HG03295,HG03428,HG03437,HG03451,HG03461,HG03472,HG03476,HG03484,HG03521,HG03583,NA18873,NA19026,NA19043,NA19093,NA19108,NA19113,NA19114,NA19116,NA19201,NA19225,NA19314,NA19315,NA19351,NA19377,NA19449,NA19454,NA19463,NA19471,NA19474,NA19625,NA19655,NA19700,NA19704,NA19711,NA19909,NA19922,NA20289 esv2664632 1 10249580 10252126 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5497140,essv5916833,essv5468908,essv6429175,essv5636176,essv6037479,essv6177818,essv6204148,essv6329801,essv6139852,essv6146888,essv6271813,essv6081874,essv6273252,essv6197999 M 1151 0 15 "" HG01140,NA18873,NA19108,NA19116,NA19315,NA19377,NA19449,NA19463,NA19471,NA19474,NA19625,NA19655,NA19700,NA19704,NA19711 esv3544233 1 10254726 10257439 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9742980 M 767 0 1 "" esv3585198 1 10254795 10257437 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851734,essv9851735,essv9851738,essv9851737,essv9851736 M 2504 0 5 "" HG00638,HG01507,NA12748,NA20509,NA20761 nsv1137728 1 10262272 10262336 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990236 M 2 0 1 "" KWS2 nsv545381 1 10296452 10423988 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709716 M 17421 1 0 KIF1B nsv1126977 1 10307025 10307084 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3985265 M 2 0 1 KIF1B KWS1 nsv545382 1 10309026 10377221 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709718,nssv709717 M 17421 0 2 KIF1B nsv477279 1 10332130 10332130 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017679 M 9 1 0 KIF1B NA18517 esv2743641 1 10334364 10335382 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6759035,essv6821172,essv6742132,essv6729612,essv6913993,essv6780860,essv6714236,essv6784499,essv6950543,essv6748253,essv6784986,essv6916618,essv6735970,essv6921705,essv6710573,essv6753488,essv6853224,essv6937671,essv6972327,essv6773430,essv6895842,essv6696983,essv6950152,essv6692753,essv6668938,essv6750589,essv6847002,essv6954731,essv6871706,essv6707257,essv6764150,essv6925681,essv6876698,essv6738803 M 96 0 34 KIF1B SSM003,SSM004,SSM008,SSM009,SSM012,SSM016,SSM018,SSM019,SSM022,SSM025,SSM026,SSM029,SSM031,SSM037,SSM038,SSM041,SSM042,SSM043,SSM047,SSM050,SSM052,SSM053,SSM057,SSM058,SSM061,SSM063,SSM066,SSM068,SSM069,SSM079,SSM086,SSM087,SSM091,SSM099 esv2743652 1 10334566 10335030 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821172,essv6780860,essv6696983,essv6729612,essv6913993,essv6714236,essv6784499,essv6950543,essv6748253,essv6937671,essv6853224,essv6773430,essv6895842,essv6784986,essv6950152,essv6692753,essv6710573,essv6668938,essv6707257,essv6871706,essv6847002,essv6954731,essv6925681,essv6876698 M 96 0 24 KIF1B SSM004,SSM008,SSM009,SSM012,SSM016,SSM019,SSM022,SSM025,SSM026,SSM031,SSM037,SSM038,SSM041,SSM042,SSM043,SSM047,SSM066,SSM068,SSM069,SSM079,SSM086,SSM087,SSM091,SSM099 esv4531 1 10334704 10334932 CNV loss Wang_et_al_2008 18987735 Sequencing essv26972 M 1 0 1 KIF1B YH nsv1130268 1 10334734 10334820 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966185 M 2 0 1 KIF1B KWS2 nsv1129867 1 10334761 10334828 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965001 M 2 0 1 KIF1B KWS2 esv3890859 1 10341516 10385664 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25784884 M 3017 0 1 KIF1B esv2550823 1 10351979 10353263 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5364930 M 1 0 1 KIF1B NA18507 nsv2409 1 10366090 10388236 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3425 M 9 1 0 KIF1B NA12878 dgv1n17 1 10366487 10387704 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437200,nsv437201 M 60 0 2 KIF1B NA18500,NA18914 nsv1003027 1 10367332 10377971 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3468399 M 29084 0 1 KIF1B nsv436146 1 10368866 10379009 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466361 M 2 0 1 KIF1B NA18505 nsv8102 1 10368970 10378846 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv26900,nssv26885,nssv24611 M 31 0 3 KIF1B NA18502,NA18853,NA19132 esv23835 1 10369418 10378885 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12065 M 40 0 4 KIF1B NA18502,NA18505,NA18508,NA18861 esv3585199 1 10369423 10378616 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9851825,essv9851824,essv9851823,essv9851758,essv9851740,essv9851757,essv9851739,essv9851742,essv9851747,essv9851741,essv9851756,essv9851743,essv9851746,essv9851745,essv9851744,essv9851750,essv9851755,essv9851748,essv9851749,essv9851754,essv9851751,essv9851753,essv9851752,essv9851763,essv9851822,essv9851789,essv9851772,essv9851762,essv9851761,essv9851760,essv9851759,essv9851766,essv9851764,essv9851771,essv9851765,essv9851770,essv9851767,essv9851769,essv9851768,essv9851788,essv9851779,essv9851774,essv9851773,essv9851778,essv9851775,essv9851777,essv9851776,essv9851787,essv9851782,essv9851780,essv9851781,essv9851783,essv9851786,essv9851785,essv9851784,essv9851790,essv9851821,essv9851795,essv9851804,essv9851794,essv9851791,essv9851793,essv9851792,essv9851798,essv9851803,essv9851797,essv9851796,essv9851802,essv9851799,essv9851801,essv9851800,essv9851820,essv9851811,essv9851806,essv9851805,essv9851810,essv9851807,essv9851808,essv9851809,essv9851814,essv9851819,essv9851813,essv9851812,essv9851818,essv9851815,essv9851817,essv9851816,essv9851827,essv9851826,essv9851828,essv9851830,essv9851829 M 2504 0 92 KIF1B HG00743,HG01092,HG01242,HG01497,HG01883,HG01894,HG02054,HG02108,HG02143,HG02308,HG02318,HG02325,HG02471,HG02497,HG02546,HG02624,HG02715,HG02768,HG02836,HG02941,HG02943,HG02973,HG02976,HG03063,HG03064,HG03073,HG03085,HG03095,HG03097,HG03112,HG03132,HG03157,HG03169,HG03175,HG03202,HG03265,HG03267,HG03268,HG03271,HG03280,HG03294,HG03300,HG03303,HG03342,HG03351,HG03354,HG03366,HG03367,HG03433,HG03499,HG03572,NA18499,NA18501,NA18502,NA18505,NA18508,NA18510,NA18853,NA18861,NA18865,NA18867,NA18868,NA18908,NA18912,NA18933,NA19118,NA19130,NA19184,NA19185,NA19198,NA19207,NA19213,NA19235,NA19238,NA19248,NA19314,NA19323,NA19355,NA19374,NA19395,NA19434,NA19452,NA19461,NA19664,NA19703,NA19707,NA19819,NA19984,NA20294,NA20320,NA20321,NA20348 esv2657507 1 10369469 10378666 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6579722,essv6523702,essv6575060,essv6391440,essv5621291,essv6409473,essv5408544,essv5788710,essv5415425,essv6470107,essv5686174,essv6438243,essv5703986,essv6440119,essv5958414,essv6304472,essv6049359,essv6232622,essv6197273,essv6315385,essv6457207,essv6334780,essv6142163,essv6032068,essv6351408,essv6365915,essv6497190 M 1151 0 27 KIF1B NA18499,NA18501,NA18502,NA18505,NA18508,NA18510,NA18867,NA18868,NA18908,NA18912,NA19130,NA19213,NA19235,NA19238,NA19248,NA19355,NA19359,NA19374,NA19395,NA19434,NA19444,NA19452,NA19461,NA19664,NA19703,NA19707,NA19819 esv2421759 1 10369546 10377983 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5037021,essv5030658,essv5011913,essv5131012,essv5146221,essv5072375,essv5053735,essv5071040,essv5077233,essv5095610,essv5075248,essv5059809,essv5104647,essv5033654,essv5093833,essv5031784,essv5089301,essv5014103,essv5029372,essv5012723,essv5028433,essv5032695,essv5100113,essv5109789,essv5031808,essv5142692,essv5118117,essv5145720,essv5062374,essv5045696,essv5151358,essv5158917,essv5005447,essv5098414,essv5081479,essv5060455,essv5155081,essv5066898,essv5124066,essv5011379,essv5117819,essv5033256,essv5073299,essv5131248,essv5087410,essv5110636,essv5049783,essv5054475,essv5062929,essv5048097,essv5131639,essv5145827,essv5074473,essv5107159,essv5064063,essv5084373,essv5141223,essv5103254,essv5013970 M 1184 0 59 KIF1B NA18497,NA18499,NA18500,NA18501,NA18505,NA18506,NA18508,NA18510,NA18853,NA18854,NA18861,NA18863,NA18867,NA18868,NA18869,NA18912,NA18913,NA18914,NA18933,NA18935,NA19118,NA19130,NA19132,NA19176,NA19179,NA19180,NA19184,NA19185,NA19186,NA19192,NA19198,NA19207,NA19213,NA19215,NA19235,NA19237,NA19238,NA19248,NA19249,NA19314,NA19359,NA19374,NA19434,NA19444,NA19452,NA19664,NA19703,NA19705,NA19819,NA20294,NA20295,NA20297,NA20322,NA20348,NA21300,NA21418,NA21441,NA21520,NA21613 nsv515546 1 10370312 10373503 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv656381,nssv695737,nssv667133,nssv690059,nssv686246,nssv667908,nssv663872,nssv660763,nssv666539,nssv658813,nssv691095,nssv679262,nssv657555,nssv658241,nssv654559,nssv671141,nssv680418,nssv680299,nssv682975,nssv656820,nssv676915,nssv690144,nssv687648 M 2026 0 23 KIF1B nsv545383 1 10370312 10373503 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173665 M 17421 0 1 KIF1B HGDP00923 nsv818666 1 10370312 10373503 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417808,nssv1418422,nssv1417809,nssv1416820 M 112 0 4 KIF1B NA18853,NA18854,NA19192,NA19238 nsv545384 1 10370312 10377221 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709719 M 17421 0 1 KIF1B esv3577732 1 10370389 10381775 CNV loss Uddin_et_al_2014 25503493 SNP array essv9796644 M 873 0 1 KIF1B 401307VR nsv1011917 1 10370390 10382314 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3471935 M 29084 0 1 KIF1B esv2764182 1 10370402 10377983 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004953,essv7004947,essv7004945,essv7004957,essv7004942,essv7004949,essv7004946,essv7004956,essv7004943,essv7004954,essv7004948,essv7004951,essv7004952,essv7004958,essv7004950 M 1109 0 15 KIF1B RW_0014,RW_0028,RW_0155,RW_0178,RW_0201,RW_0220,RW_0258,RW_0266,RW_0306,RW_0329,RW_0538,RW_0576,RW_0616,RW_0653,RW_0660 nsv441678 1 10370541 10377983 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617791,nssv1617858,nssv1617869,nssv1617880,nssv1617780,nssv1617891,nssv1617747,nssv1617713,nssv1617736,nssv1617847,nssv1617902,nssv1617758,nssv1617813,nssv1617836,nssv1617725,nssv1617802,nssv1617769,nssv1617824 M 270 0 18 KIF1B NA18500,NA18501,NA18502,NA18505,NA18506,NA18508,NA18853,NA18854,NA18861,NA18863,NA18912,NA18913,NA18914,NA19130,NA19132,NA19192,NA19207,NA19238 nsv513981 1 10370854 10377962 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2845140,nssv2845153,nssv2845148,nssv2845157,nssv2843660,nssv2845137,nssv2845149,nssv2845145,nssv2845141,nssv2845138,nssv2845150,nssv2845156,nssv2845167,nssv2845142,nssv2845144,nssv2845154,nssv2845161,nssv2845158,nssv2845143,nssv2845155,nssv2845160,nssv2845166,nssv2845162,nssv2845151,nssv2843659,nssv2845159,nssv2845163,nssv2845165,nssv2845139,nssv2845146,nssv2845164,nssv2845152,nssv2845147 M 2366 0 33 KIF1B NA18497,NA18499,NA18500,NA18501,NA18506,NA18508,NA18510,NA18853,NA18854,NA18861,NA18863,NA18867,NA18868,NA18869,NA18908,NA18933,NA18935,NA19118,NA19130,NA19132,NA19179,NA19180,NA19184,NA19185,NA19186,NA19192,NA19198,NA19207,NA19235,NA19237,NA19248,NA19249,NA21441 nsv437970 1 10375179 10378416 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468185,nssv471534,nssv467741,nssv468074,nssv467852,nssv467963 M 269 0 6 KIF1B NA18500,NA18502,NA18912,NA18914,NA19130,NA19132 esv2764192 1 10383734 10594186 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7004959,essv7004960 M 1109 2 0 APITD1,APITD1-CORT,CORT,DFFA,KIF1B,PEX14,PGD RW_0575,RW_0621 nsv8213 1 10450914 10460439 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28055 M 31 1 0 PGD NA19221 nsv1145320 1 10456807 10456875 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982414 M 2 0 1 "" KWS1 esv1010529 1 10476195 10478586 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564483 M 3 0 1 PGD HuRef nsv8324 1 10481597 10484645 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21428,nssv11773,nssv24608,nssv28037,nssv24609,nssv26887,nssv28548,nssv29251,nssv28046,nssv28052,nssv26889,nssv24615,nssv24596,nssv26893,nssv26875,nssv12119,nssv28538,nssv21445,nssv29270,nssv24601 M 31 0 20 "" NA07029,NA10839,NA10847,NA12155,NA12740,NA12802,NA18502,NA18504,NA18517,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18972,NA18975,NA18980,NA19132,NA19173 nsv511676 1 10482243 10483797 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626314 M 1 0 1 "" 1 esv7749 1 10482248 10484003 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30190 M 1 0 0 "" dgv12n67 1 10482342 10483642 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827808,nsv827919 M 31 0 11 "" AK12,AK16,AK20,AK4,NA18526,NA18552,NA18564,NA18951,NA18968,NA18972,NA18997 esv2743663 1 10482434 10483755 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6824973,essv6832591,essv6797440,essv6821173,essv6950163,essv6729613,essv6784510,essv6714237,essv6753489,essv6950544,essv6780861,essv6748265,essv6916629,essv6735971,essv6810335,essv6921708,essv6888998,essv6761847,essv6880414,essv6853225,essv6773432,essv6972329,essv6692755,essv6892312,essv6766534,essv6784988,essv6668939,essv6847003,essv6898605,essv6764151,essv6707258,essv6954732,essv6759036,essv6871707,essv6863947,essv6695610,essv6666887,essv6710574,essv6925682,essv6738804,essv6876710 M 96 0 41 "" SSM003,SSM004,SSM006,SSM008,SSM009,SSM012,SSM018,SSM019,SSM025,SSM026,SSM029,SSM030,SSM031,SSM037,SSM041,SSM042,SSM043,SSM047,SSM050,SSM052,SSM058,SSM061,SSM062,SSM063,SSM064,SSM066,SSM068,SSM069,SSM072,SSM076,SSM079,SSM080,SSM082,SSM086,SSM087,SSM089,SSM091,SSM094,SSM097,SSM098,SSM100 esv3544344 1 10482436 10483963 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9743091 M 767 0 1 "" esv3677 1 10482452 10483948 CNV loss Wang_et_al_2008 18987735 Sequencing essv26118 M 1 0 1 "" YH nsv1075602 1 10482479 10483792 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3765281 M 1 0 1 "" KWP1 esv2663489 1 10482480 10483779 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5843789,essv6378574,essv5641017,essv6414038,essv5795097,essv6117719,essv5810798,essv6594078,essv5740974,essv6214864,essv5710567,essv6384101,essv5705105,essv6059667,essv5441444,essv6122210,essv5824742,essv6386072,essv5804173,essv5927889,essv5446927,essv6043683,essv5735132,essv6078400,essv5683878,essv5943111,essv5569875,essv6389924,essv5550187,essv6531876,essv5832601,essv6501231,essv5635493,essv6391680,essv5740519,essv6543000,essv5638395,essv6564821,essv5502310,essv6008032,essv5669670,essv6573138,essv5495818,essv6398498,essv5691195,essv6055665,essv5583001,essv6009953,essv5824442,essv6184452,essv5656451,essv6403618,essv5658131,essv6586677,essv5810237,essv6405500,essv5440001,essv6028426,essv5777485,essv6407585,essv5666496,essv6141541,essv5442777,essv6545437,essv5506622,essv5863418,essv5698538,essv6168883,essv5793370,essv5931203,essv5460769,essv6554602,essv5512109,essv6109890,essv5657531,essv6414679,essv5494449,essv6414817,essv5694687,essv5997646,essv5713930,essv6416506,essv5717506,essv6181556,essv5763210,essv6249263,essv5658801,essv5887286,essv5454111,essv6516351,essv5711377,essv6504427,essv5416517,essv6072585,essv5608394,essv6189780,essv5562999,essv6590902,essv5665611,essv6421742,essv5466963,essv6423986,essv5543246,essv5918987,essv5763701,essv6426186,essv5671844,essv6427340,essv5749291,essv5998238,essv5774239,essv6428644,essv5697238,essv6429246,essv5629542,essv5958737,essv5772119,essv6488949,essv5759580,essv6179259,essv5417192,essv6434552,essv5474499,essv6543375,essv5611588,essv6116949,essv5532963,essv6077962,essv5644499,essv6494633,essv5840246,essv6009955,essv5433824,essv6552600,essv5830822,essv6437789,essv5757823,essv6003335,essv5603262,essv6440924,essv5446149,essv6248810,essv5596653,essv6025880,essv5451033,essv6443242,essv5534987,essv6445052,essv5656121,essv6445551,essv5561822,essv6446701,essv5734741,essv5913085,essv5730685,essv5996708,essv5697149,essv6502984,essv5540041,essv5947020,essv5462182,essv6452751,essv5764037,essv6452805,essv5800240,essv6453178,essv5754412,essv6453959,essv5443727,essv6454078,essv5838191,essv5922226,essv5654749,essv6545964,essv5507327,essv6495342,essv5835608,essv6130087,essv5651614,essv6293177,essv5750389,essv5970585,essv5507435,essv6293727,essv5818762,essv5897439,essv5448203,essv6170202,essv5708184,essv6292755,essv5845475,essv6585838,essv5450041,essv6097611,essv5704183,essv5939677,essv5407871,essv6030917,essv5507226,essv6476226,essv5697864,essv6015757,essv5592256,essv5929071,essv5494257,essv5987641,essv5646061,essv6032975,essv5448258,essv5926047,essv5478376,essv6515930,essv5728353,essv6529147,essv5660052,essv6277663,essv5517230,essv6152646,essv5435569,essv6053762,essv5791150,essv6217325,essv5477948,essv6556918,essv5707178,essv6106920,essv5649150,essv5977891,essv5742989,essv6233420,essv5589516,essv6300912,essv5556330,essv6087820,essv5687924,essv5889982,essv5764814,essv5876716,essv5786285,essv6303824,essv5541688,essv5884041,essv5606002,essv5982711,essv5441198,essv5941868,essv5438740,essv6544578,essv5705603,essv6305814,essv5647922,essv5881601,essv5434620,essv5914562,essv5697031,essv6309160,essv5731253,essv6309345,essv5796161,essv6309362,essv5403355,essv6309428,essv5410129,essv6309772,essv5485971,essv6310438,essv5769734,essv5948908,essv5437468,essv6517634,essv5560994,essv6079804,essv5742081,essv6174947,essv5446394,essv5876249,essv5747055,essv5955204,essv5638334,essv6543572,essv5618775,essv5932189,essv5645970,essv6189972,essv5444810,essv6150102,essv5809466,essv6036188,essv5593008,essv6515464,essv5744022,essv6475246,essv5735105,essv6546067,essv5397699,essv6105838,essv5806211,essv6258737,essv5621102,essv5853140,essv5825384,essv6319525,essv5719048,essv6070115,essv5789398,essv6267855,essv5539171,essv6261410,essv5453084,essv6003496,essv5443914,essv6267519,essv5830286,essv6215283,essv5450198,essv6320926,essv5590662,essv5925116,essv5543320,essv6053302,essv5664015,essv6321185,essv5668324,essv6561262,essv5802169,essv6191903,essv5598583,essv5926985,essv5549458,essv5906683,essv5441304,essv5859131,essv5682527,essv6571552,essv5840040,essv6280195,essv5547098,essv6045770,essv5613652,essv6193031,essv5651394,essv5901531,essv5519520,essv6032337,essv5753476,essv6523588,essv5671132,essv5954026,essv5656853,essv6327097,essv5594797,essv6031469,essv5565916,essv6037557,essv5487149,essv5915555,essv5575062,essv6327385,essv5497871,essv5893598,essv5740371,essv6079544,essv5825425,essv6497445,essv5785639,essv6524660,essv5543603,essv5879605,essv5828447,essv6328463,essv5546486,essv6129891,essv5546296,essv6183826,essv5547251,essv6331455,essv5422972,essv6213237,essv5496640,essv6104344,essv5563739,essv6332771,essv5631944,essv6520415,essv5670783,essv6594866,essv5479877,essv6333904,essv5630483,essv6244164,essv5713434,essv6044242,essv5736515,essv6481416,essv5437854,essv6243382,essv5425326,essv6594872,essv5416365,essv5941406,essv5794107,essv6040525,essv5483100,essv5982784,essv5653298,essv6505315,essv5463208,essv6174976,essv5582559,essv6337533,essv5579039,essv6337532,essv5569218,essv6004934,essv5645642,essv6270351,essv5469932,essv6287583,essv5400210,essv6338142,essv5429067,essv6213143,essv5637092,essv6145681,essv5656514,essv6535993,essv6234767,essv6020882,essv6120754,essv6275055,essv6166291,essv5869050,essv6521001,essv6154050,essv6516379,essv6519788,essv6343041,essv6077186,essv6044459,essv6462889,essv6045572,essv6215221,essv6037609,essv6346495,essv5939054,essv5979944,essv6569641,essv6202139,essv6236164,essv6053369,essv6500997,essv6194148,essv6211683,essv6350388,essv6217647,essv6160005,essv6041397,essv5847871,essv6051497,essv6486985,essv6069441,essv6544988,essv6353822,essv6481054,essv5925061,essv6466577,essv5855374,essv6159821,essv5919934,essv6498652,essv6358420,essv6358679,essv6129820,essv6571216,essv6078013,essv6359688,essv6523322,essv6283296,essv6197783,essv6259705,essv6361074,essv6148345,essv6249189,essv5879659,essv6083833,essv6556368,essv5874310,essv6082660,essv6255756,essv6083572,essv5978278,essv6362631,essv5980067,essv6232460,essv5886197,essv6499481,essv6115867,essv5999646,essv6023097,essv5996660,essv6365430,essv6127169,essv6497903,essv6367831,essv6368159,essv6214972,essv6473890,essv5977358,essv5893636,essv6219375,essv6226442,essv6371106,essv6534045,essv6081132,essv6225457,essv6140873,essv5929896,essv6553649,essv6593522,essv6147076,essv6037170,essv6375135,essv6001004,essv6581097,essv6258207,essv6067284,essv6489166,essv5923578,essv5947983,essv6153607,essv5864135,essv6056143,essv6569221,essv6112411,essv6587142,essv6485389,essv6314037,essv5998544,essv6226514,essv6020925,essv6490899,essv6196780,essv6108804,essv5890037,essv6285295,essv6057148,essv6191498,essv5951749,essv6570399 M 1151 0 549 "" HG00096,HG00112,HG00114,HG00116,HG00118,HG00120,HG00124,HG00126,HG00136,HG00137,HG00151,HG00152,HG00156,HG00158,HG00160,HG00177,HG00180,HG00182,HG00185,HG00187,HG00189,HG00190,HG00232,HG00239,HG00242,HG00244,HG00247,HG00250,HG00251,HG00253,HG00257,HG00262,HG00264,HG00267,HG00268,HG00270,HG00271,HG00273,HG00274,HG00275,HG00276,HG00277,HG00280,HG00281,HG00282,HG00285,HG00306,HG00311,HG00312,HG00313,HG00315,HG00318,HG00320,HG00324,HG00326,HG00328,HG00329,HG00330,HG00334,HG00336,HG00339,HG00344,HG00377,HG00403,HG00404,HG00418,HG00419,HG00427,HG00436,HG00442,HG00443,HG00448,HG00475,HG00476,HG00479,HG00525,HG00531,HG00534,HG00536,HG00543,HG00554,HG00556,HG00557,HG00559,HG00560,HG00565,HG00577,HG00578,HG00581,HG00584,HG00590,HG00592,HG00593,HG00595,HG00607,HG00608,HG00610,HG00611,HG00613,HG00614,HG00620,HG00625,HG00626,HG00628,HG00634,HG00635,HG00641,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00663,HG00671,HG00683,HG00684,HG00692,HG00693,HG00699,HG00701,HG00702,HG00704,HG00707,HG00708,HG00732,HG00737,HG01047,HG01048,HG01051,HG01055,HG01060,HG01061,HG01066,HG01069,HG01070,HG01073,HG01075,HG01079,HG01080,HG01082,HG01098,HG01102,HG01107,HG01108,HG01112,HG01124,HG01125,HG01134,HG01136,HG01137,HG01140,HG01148,HG01149,HG01167,HG01171,HG01174,HG01182,HG01187,HG01188,HG01191,HG01197,HG01198,HG01204,HG01250,HG01251,HG01334,HG01350,HG01354,HG01356,HG01357,HG01365,HG01366,HG01374,HG01375,HG01377,HG01378,HG01383,HG01384,HG01390,HG01437,HG01440,HG01441,HG01461,HG01462,HG01492,HG01494,HG01497,HG01498,HG01521,HG01550,HG01551,NA06985,NA06994,NA07000,NA07037,NA07051,NA07056,NA07347,NA07357,NA11829,NA11840,NA11843,NA11919,NA11930,NA11933,NA11992,NA11995,NA12003,NA12004,NA12005,NA12006,NA12045,NA12046,NA12058,NA12144,NA12155,NA12272,NA12273,NA12275,NA12341,NA12347,NA12348,NA12400,NA12414,NA12546,NA12717,NA12748,NA12749,NA12750,NA12751,NA12763,NA12775,NA12776,NA12778,NA12828,NA12829,NA12830,NA12842,NA12843,NA12878,NA12892,NA18486,NA18487,NA18488,NA18489,NA18498,NA18499,NA18501,NA18502,NA18504,NA18505,NA18508,NA18517,NA18519,NA18522,NA18526,NA18530,NA18533,NA18534,NA18535,NA18538,NA18544,NA18549,NA18550,NA18552,NA18555,NA18558,NA18560,NA18563,NA18564,NA18565,NA18572,NA18577,NA18595,NA18603,NA18610,NA18612,NA18615,NA18617,NA18620,NA18621,NA18624,NA18627,NA18628,NA18630,NA18632,NA18633,NA18634,NA18635,NA18638,NA18853,NA18856,NA18861,NA18867,NA18868,NA18870,NA18871,NA18873,NA18874,NA18907,NA18908,NA18909,NA18910,NA18912,NA18916,NA18923,NA18924,NA18933,NA18934,NA18943,NA18948,NA18950,NA18951,NA18956,NA18963,NA18967,NA18968,NA18971,NA18972,NA18975,NA18976,NA18980,NA18983,NA18984,NA18987,NA18989,NA18991,NA19000,NA19004,NA19005,NA19007,NA19012,NA19055,NA19057,NA19060,NA19062,NA19065,NA19067,NA19068,NA19072,NA19075,NA19079,NA19082,NA19085,NA19087,NA19092,NA19093,NA19102,NA19108,NA19114,NA19116,NA19119,NA19129,NA19130,NA19137,NA19138,NA19147,NA19172,NA19190,NA19198,NA19201,NA19207,NA19209,NA19210,NA19213,NA19223,NA19225,NA19235,NA19236,NA19238,NA19248,NA19256,NA19257,NA19311,NA19312,NA19316,NA19317,NA19318,NA19321,NA19324,NA19327,NA19328,NA19338,NA19346,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19377,NA19380,NA19381,NA19383,NA19384,NA19385,NA19390,NA19391,NA19394,NA19395,NA19397,NA19398,NA19401,NA19404,NA19428,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19443,NA19444,NA19445,NA19446,NA19448,NA19452,NA19453,NA19455,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19470,NA19472,NA19661,NA19663,NA19664,NA19675,NA19676,NA19678,NA19681,NA19682,NA19685,NA19700,NA19703,NA19707,NA19711,NA19712,NA19713,NA19716,NA19719,NA19720,NA19722,NA19723,NA19725,NA19726,NA19728,NA19731,NA19732,NA19746,NA19747,NA19749,NA19750,NA19755,NA19756,NA19761,NA19762,NA19770,NA19773,NA19774,NA19777,NA19779,NA19782,NA19783,NA19786,NA19818,NA19819,NA19835,NA19908,NA19914,NA19917,NA19920,NA19921,NA19982,NA20126,NA20281,NA20291,NA20294,NA20299,NA20314,NA20317,NA20322,NA20332,NA20334,NA20341,NA20342,NA20346,NA20348,NA20506,NA20510,NA20512,NA20515,NA20518,NA20521,NA20524,NA20525,NA20526,NA20527,NA20530,NA20533,NA20535,NA20536,NA20537,NA20539,NA20544,NA20581,NA20585,NA20586,NA20588,NA20589,NA20753,NA20755,NA20757,NA20758,NA20759,NA20768,NA20769,NA20770,NA20771,NA20774,NA20775,NA20783,NA20786,NA20790,NA20796,NA20797,NA20798,NA20801,NA20802,NA20804,NA20805,NA20806,NA20807,NA20809,NA20810,NA20812,NA20814,NA20818,NA20819,NA20826,NA20828 dgv34n106 1 10482480 10483800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1121066,nsv1120616,nsv1130192 M 2 0 1 "" KWS2 nsv160262 1 10482481 10483779 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178840 M 24 "" esv3585200 1 10482499 10483790 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing 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essv9852162,essv9852167,essv9852161,essv9852160,essv9852163,essv9852166,essv9852165,essv9852164,essv9852183,essv9852174,essv9852203,essv9852198,essv9852170,essv9852173,essv9852172,essv9852171,essv9852177,essv9852182,essv9852176,essv9852175,essv9852181,essv9852178,essv9852180,essv9852179,essv9852202,essv9852197,essv9852189,essv9852187,essv9852186,essv9852188,essv9852185,essv9852184,essv9852196,essv9852191,essv9852201,essv9852190,essv9852193,essv9852195,essv9852192,essv9852194,essv9852259,essv9852233,essv9852206,essv9852260,essv9852215,essv9852219,essv9852214,essv9852209,essv9852208,essv9852207,essv9852213,essv9852210,essv9852212,essv9852211,essv9852218,essv9852232,essv9852223,essv9852217,essv9852222,essv9852216,essv9852221,essv9852220,essv9852226,essv9852231,essv9852225,essv9852224,essv9852230,essv9852227,essv9852229,essv9852228,essv9852245,essv9852247,essv9852258,essv9852237,essv9852236,essv9852235,essv9852234,essv9852246,essv9852239,essv9852244,essv9852238,essv9852243,essv9852240,essv9852242,essv9852241,essv9852253,essv9852257,essv9852252,essv9852251,essv9852250,essv9852248,essv9852249,essv9852256,essv9852255,essv9852254 M 2504 0 1345 "" HG00096,HG00099,HG00100,HG00102,HG00105,HG00107,HG00109,HG00112,HG00113,HG00114,HG00116,HG00118,HG00126,HG00136,HG00137,HG00142,HG00145,HG00148,HG00151,HG00157,HG00158,HG00160,HG00177,HG00180,HG00182,HG00185,HG00187,HG00189,HG00190,HG00232,HG00234,HG00238,HG00239,HG00242,HG00244,HG00250,HG00251,HG00253,HG00257,HG00262,HG00264,HG00267,HG00268,HG00271,HG00273,HG00274,HG00275,HG00276,HG00277,HG00280,HG00281,HG00282,HG00285,HG00290,HG00304,HG00306,HG00308,HG00311,HG00313,HG00315,HG00318,HG00320,HG00324,HG00326,HG00328,HG00329,HG00330,HG00334,HG00336,HG00339,HG00341,HG00344,HG00349,HG00350,HG00355,HG00360,HG00364,HG00365,HG00368,HG00378,HG00379,HG00381,HG00382,HG00383,HG00404,HG00406,HG00407,HG00419,HG00436,HG00442,HG00443,HG00446,HG00448,HG00452,HG00458,HG00475,HG00476,HG00525,HG00531,HG00534,HG00536,HG00543,HG00554,HG00556,HG00557,HG00559,HG00560,HG00565,HG00581,HG00584,HG00590,HG00592,HG00593,HG00595,HG00598,HG00599,HG00607,HG00608,HG00610,HG00611,HG00613,HG00614,HG00620,HG00622,HG00625,HG00628,HG00631,HG00632,HG00634,HG00641,HG00650,HG00651,HG00654,HG00656,HG00657,HG00663,HG00671,HG00675,HG00683,HG00684,HG00692,HG00693,HG00699,HG00701,HG00704,HG00707,HG00708,HG00729,HG00732,HG00737,HG00742,HG00743,HG00844,HG00864,HG01031,HG01047,HG01048,HG01051,HG01055,HG01058,HG01060,HG01061,HG01063,HG01066,HG01069,HG01070,HG01073,HG01075,HG01079,HG01080,HG01082,HG01085,HG01088,HG01092,HG01094,HG01098,HG01102,HG01104,HG01105,HG01107,HG01108,HG01111,HG01112,HG01121,HG01122,HG01124,HG01125,HG01130,HG01131,HG01134,HG01136,HG01137,HG01139,HG01140,HG01142,HG01148,HG01149,HG01161,HG01164,HG01167,HG01171,HG01174,HG01177,HG01187,HG01188,HG01191,HG01197,HG01198,HG01204,HG01241,HG01242,HG01250,HG01251,HG01253,HG01257,HG01277,HG01284,HG01312,HG01325,HG01334,HG01344,HG01345,HG01350,HG01354,HG01356,HG01357,HG01362,HG01365,HG01366,HG01369,HG01372,HG01374,HG01375,HG01377,HG01378,HG01383,HG01384,HG01390,HG01392,HG01393,HG01395,HG01398,HG01403,HG01405,HG01412,HG01413,HG01414,HG01431,HG01435,HG01437,HG01438,HG01440,HG01441,HG01444,HG01461,HG01462,HG01474,HG01485,HG01492,HG01494,HG01497,HG01498,HG01500,HG01504,HG01507,HG01509,HG01510,HG01512,HG01518,HG01519,HG01521,HG01524,HG01525,HG01527,HG01537,HG01550,HG01551,HG01565,HG01571,HG01572,HG01589,HG01599,HG01602,HG01603,HG01605,HG01606,HG01607,HG01610,HG01612,HG01615,HG01620,HG01623,HG01625,HG01632,HG01669,HG01672,HG01675,HG01676,HG01682,HG01684,HG01686,HG01697,HG01700,HG01704,HG01705,HG01707,HG01708,HG01709,HG01746,HG01757,HG01761,HG01766,HG01767,HG01768,HG01770,HG01773,HG01783,HG01785,HG01786,HG01789,HG01796,HG01797,HG01801,HG01802,HG01806,HG01811,HG01812,HG01815,HG01841,HG01842,HG01845,HG01849,HG01850,HG01851,HG01857,HG01858,HG01859,HG01860,HG01862,HG01863,HG01865,HG01866,HG01869,HG01879,HG01880,HG01883,HG01886,HG01890,HG01893,HG01894,HG01917,HG01920,HG01921,HG01924,HG01926,HG01932,HG01933,HG01936,HG01938,HG01944,HG01947,HG01948,HG01950,HG01951,HG01953,HG01954,HG01956,HG01958,HG01961,HG01965,HG01968,HG01971,HG01973,HG01977,HG01986,HG01991,HG01992,HG02002,HG02003,HG02006,HG02008,HG02009,HG02010,HG02012,HG02014,HG02016,HG02017,HG02020,HG02025,HG02032,HG02035,HG02040,HG02047,HG02048,HG02049,HG02050,HG02052,HG02053,HG02054,HG02060,HG02076,HG02078,HG02079,HG02084,HG02085,HG02086,HG02089,HG02090,HG02095,HG02104,HG02105,HG02108,HG02113,HG02127,HG02128,HG02130,HG02131,HG02137,HG02139,HG02142,HG02143,HG02147,HG02150,HG02152,HG02156,HG02178,HG02179,HG02180,HG02185,HG02187,HG02223,HG02232,HG02238,HG02239,HG02253,HG02255,HG02259,HG02260,HG02262,HG02275,HG02277,HG02278,HG02284,HG02285,HG02286,HG02292,HG02299,HG02307,HG02308,HG02309,HG02312,HG02314,HG02318,HG02323,HG02325,HG02330,HG02337,HG02343,HG02348,HG02351,HG02355,HG02373,HG02374,HG02375,HG02379,HG02380,HG02384,HG02386,HG02392,HG02396,HG02402,HG02407,HG02409,HG02419,HG02420,HG02425,HG02427,HG02442,HG02455,HG02462,HG02470,HG02471,HG02481,HG02485,HG02489,HG02490,HG02491,HG02496,HG02497,HG02502,HG02505,HG02508,HG02512,HG02522,HG02537,HG02546,HG02549,HG02555,HG02562,HG02573,HG02577,HG02580,HG02582,HG02583,HG02586,HG02588,HG02595,HG02601,HG02611,HG02613,HG02614,HG02620,HG02624,HG02628,HG02629,HG02643,HG02646,HG02648,HG02649,HG02654,HG02655,HG02657,HG02658,HG02661,HG02675,HG02676,HG02678,HG02679,HG02687,HG02688,HG02690,HG02691,HG02696,HG02702,HG02703,HG02715,HG02716,HG02722,HG02724,HG02728,HG02731,HG02734,HG02737,HG02756,HG02763,HG02768,HG02769,HG02774,HG02786,HG02787,HG02793,HG02805,HG02808,HG02810,HG02813,HG02814,HG02816,HG02817,HG02819,HG02836,HG02852,HG02861,HG02870,HG02881,HG02882,HG02884,HG02887,HG02888,HG02890,HG02895,HG02896,HG02941,HG02943,HG02944,HG02947,HG02952,HG02953,HG02973,HG02974,HG02976,HG02977,HG02979,HG02982,HG02983,HG03007,HG03012,HG03016,HG03021,HG03027,HG03028,HG03039,HG03046,HG03048,HG03049,HG03052,HG03054,HG03055,HG03057,HG03060,HG03061,HG03063,HG03064,HG03069,HG03072,HG03073,HG03074,HG03078,HG03079,HG03081,HG03085,HG03086,HG03095,HG03096,HG03097,HG03099,HG03108,HG03109,HG03112,HG03115,HG03118,HG03124,HG03126,HG03132,HG03135,HG03136,HG03139,HG03157,HG03159,HG03160,HG03162,HG03163,HG03168,HG03169,HG03175,HG03190,HG03193,HG03195,HG03196,HG03198,HG03202,HG03224,HG03234,HG03238,HG03241,HG03246,HG03265,HG03267,HG03268,HG03270,HG03271,HG03280,HG03291,HG03294,HG03295,HG03297,HG03300,HG03301,HG03303,HG03313,HG03342,HG03351,HG03354,HG03363,HG03366,HG03367,HG03369,HG03370,HG03372,HG03376,HG03382,HG03388,HG03401,HG03419,HG03432,HG03433,HG03436,HG03437,HG03439,HG03442,HG03445,HG03446,HG03452,HG03457,HG03460,HG03464,HG03469,HG03470,HG03472,HG03473,HG03478,HG03479,HG03484,HG03485,HG03488,HG03491,HG03499,HG03511,HG03514,HG03515,HG03518,HG03538,HG03539,HG03557,HG03558,HG03559,HG03563,HG03565,HG03571,HG03572,HG03577,HG03578,HG03585,HG03593,HG03594,HG03598,HG03603,HG03604,HG03615,HG03616,HG03624,HG03629,HG03644,HG03645,HG03652,HG03663,HG03667,HG03684,HG03689,HG03692,HG03694,HG03695,HG03696,HG03697,HG03698,HG03702,HG03706,HG03717,HG03718,HG03720,HG03733,HG03738,HG03740,HG03741,HG03744,HG03753,HG03757,HG03762,HG03771,HG03775,HG03778,HG03779,HG03780,HG03781,HG03782,HG03784,HG03785,HG03786,HG03787,HG03789,HG03796,HG03803,HG03808,HG03809,HG03814,HG03815,HG03824,HG03826,HG03832,HG03833,HG03836,HG03838,HG03846,HG03849,HG03851,HG03854,HG03856,HG03861,HG03863,HG03869,HG03871,HG03873,HG03884,HG03885,HG03886,HG03888,HG03890,HG03894,HG03897,HG03899,HG03900,HG03902,HG03905,HG03907,HG03911,HG03914,HG03916,HG03917,HG03920,HG03937,HG03941,HG03944,HG03945,HG03947,HG03950,HG03955,HG03967,HG03968,HG03969,HG03974,HG03977,HG03978,HG03990,HG03995,HG03998,HG03999,HG04001,HG04002,HG04003,HG04006,HG04017,HG04018,HG04025,HG04026,HG04033,HG04039,HG04042,HG04054,HG04056,HG04075,HG04099,HG04100,HG04131,HG04134,HG04140,HG04141,HG04146,HG04152,HG04153,HG04155,HG04156,HG04159,HG04161,HG04162,HG04164,HG04177,HG04180,HG04185,HG04186,HG04188,HG04195,HG04198,HG04209,HG04214,HG04222,HG04225,HG04227,HG04235,HG04238,HG04239,NA06985,NA06994,NA07000,NA07037,NA07051,NA07056,NA07347,NA07357,NA10847,NA11829,NA11840,NA11843,NA11919,NA11930,NA11932,NA11933,NA11992,NA11995,NA12003,NA12004,NA12005,NA12006,NA12044,NA12045,NA12046,NA12058,NA12144,NA12155,NA12272,NA12273,NA12275,NA12287,NA12340,NA12341,NA12347,NA12348,NA12383,NA12400,NA12414,NA12546,NA12717,NA12748,NA12749,NA12750,NA12751,NA12760,NA12763,NA12775,NA12776,NA12778,NA12815,NA12828,NA12829,NA12830,NA12842,NA12843,NA12873,NA12874,NA12878,NA18486,NA18488,NA18489,NA18498,NA18499,NA18501,NA18502,NA18504,NA18505,NA18508,NA18510,NA18517,NA18519,NA18522,NA18525,NA18526,NA18530,NA18533,NA18534,NA18535,NA18538,NA18544,NA18549,NA18550,NA18552,NA18555,NA18558,NA18560,NA18563,NA18564,NA18565,NA18572,NA18577,NA18595,NA18603,NA18610,NA18612,NA18615,NA18617,NA18620,NA18621,NA18624,NA18625,NA18627,NA18628,NA18630,NA18632,NA18633,NA18634,NA18635,NA18638,NA18640,NA18641,NA18642,NA18643,NA18648,NA18740,NA18747,NA18748,NA18749,NA18757,NA18853,NA18856,NA18861,NA18864,NA18865,NA18867,NA18868,NA18870,NA18871,NA18873,NA18874,NA18877,NA18878,NA18879,NA18907,NA18908,NA18909,NA18910,NA18912,NA18915,NA18916,NA18923,NA18924,NA18933,NA18934,NA18939,NA18943,NA18946,NA18948,NA18950,NA18951,NA18956,NA18963,NA18967,NA18968,NA18970,NA18971,NA18972,NA18974,NA18975,NA18976,NA18980,NA18983,NA18984,NA18987,NA18989,NA18991,NA18992,NA18993,NA18994,NA18995,NA18997,NA18998,NA19000,NA19001,NA19004,NA19005,NA19006,NA19011,NA19012,NA19017,NA19019,NA19025,NA19026,NA19027,NA19030,NA19035,NA19036,NA19037,NA19041,NA19055,NA19057,NA19060,NA19062,NA19065,NA19067,NA19068,NA19072,NA19075,NA19079,NA19082,NA19085,NA19086,NA19087,NA19091,NA19092,NA19093,NA19095,NA19096,NA19102,NA19108,NA19114,NA19116,NA19117,NA19118,NA19119,NA19129,NA19130,NA19137,NA19138,NA19141,NA19143,NA19146,NA19147,NA19149,NA19172,NA19175,NA19184,NA19185,NA19190,NA19198,NA19201,NA19206,NA19207,NA19209,NA19210,NA19213,NA19214,NA19223,NA19225,NA19235,NA19236,NA19238,NA19248,NA19256,NA19257,NA19307,NA19308,NA19309,NA19310,NA19314,NA19316,NA19317,NA19318,NA19320,NA19321,NA19323,NA19324,NA19327,NA19328,NA19338,NA19346,NA19350,NA19355,NA19360,NA19372,NA19374,NA19377,NA19378,NA19380,NA19383,NA19384,NA19385,NA19390,NA19391,NA19394,NA19395,NA19397,NA19401,NA19404,NA19428,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19443,NA19445,NA19446,NA19448,NA19452,NA19455,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19472,NA19475,NA19661,NA19663,NA19664,NA19676,NA19678,NA19681,NA19682,NA19700,NA19703,NA19707,NA19711,NA19712,NA19713,NA19716,NA19719,NA19720,NA19722,NA19723,NA19725,NA19728,NA19732,NA19734,NA19735,NA19741,NA19746,NA19747,NA19749,NA19750,NA19755,NA19756,NA19761,NA19762,NA19764,NA19770,NA19773,NA19774,NA19777,NA19779,NA19782,NA19783,NA19786,NA19792,NA19795,NA19818,NA19819,NA19835,NA19908,NA19913,NA19914,NA19917,NA19920,NA19921,NA19922,NA19923,NA19982,NA19984,NA20126,NA20274,NA20281,NA20291,NA20294,NA20299,NA20314,NA20317,NA20318,NA20320,NA20321,NA20332,NA20334,NA20342,NA20346,NA20348,NA20351,NA20355,NA20357,NA20359,NA20362,NA20506,NA20510,NA20512,NA20514,NA20515,NA20518,NA20521,NA20524,NA20525,NA20527,NA20530,NA20533,NA20535,NA20536,NA20539,NA20544,NA20581,NA20585,NA20586,NA20588,NA20589,NA20753,NA20755,NA20757,NA20758,NA20759,NA20767,NA20768,NA20769,NA20770,NA20771,NA20774,NA20775,NA20783,NA20786,NA20790,NA20796,NA20797,NA20798,NA20801,NA20802,NA20804,NA20805,NA20806,NA20807,NA20809,NA20810,NA20812,NA20814,NA20818,NA20819,NA20821,NA20822,NA20826,NA20828,NA20832,NA20846,NA20847,NA20849,NA20852,NA20856,NA20859,NA20862,NA20864,NA20866,NA20867,NA20872,NA20874,NA20876,NA20878,NA20881,NA20884,NA20885,NA20887,NA20892,NA20895,NA20896,NA20901,NA20906,NA20908,NA20911,NA21086,NA21087,NA21093,NA21095,NA21099,NA21103,NA21104,NA21106,NA21107,NA21108,NA21109,NA21110,NA21112,NA21113,NA21114,NA21115,NA21119,NA21122,NA21125,NA21126,NA21128,NA21129,NA21137,NA21142,NA21143 esv2853569 1 10482502 10483801 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123136 M 1 0 1 "" HuRef nsv1154073 1 10482548 10483796 CNV deletion John_et_al_2014 26484159 Sequencing nssv4003342 M 1 0 1 "" KWB1 esv26404 1 10482550 10483507 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14503 M 40 0 7 "" NA07037,NA12004,NA12749,NA15510,NA18517,NA18909,NA19129 dgv103n54 1 10482583 10483167 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545388,nsv545386,nsv545385,nsv545390 M 17421 4 0 "" dgv104n54 1 10482583 10483456 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545387,nsv545391,nsv545392,nsv545389 M 17421 0 188 "" nsv545393 1 10483001 10483456 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709912 M 17421 0 1 "" nsv545394 1 10483161 10483456 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709918,nssv709914,nssv709913,nssv709915,nssv709916,nssv709917,nssv709919,nssv709920 M 17421 0 8 "" nsv1075141 1 10526339 10526414 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769145 M 1 0 1 DFFA KWP1 esv2743674 1 10542585 10549257 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6756545 M 96 0 1 PEX14 SSM059 esv3585201 1 10543545 10545992 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853210,essv9853177,essv9853209,essv9853176,essv9853183,essv9853178,essv9853192,essv9853182,essv9853179,essv9853181,essv9853180,essv9853186,essv9853191,essv9853185,essv9853184,essv9853190,essv9853187,essv9853189,essv9853188,essv9853194,essv9853208,essv9853199,essv9853193,essv9853198,essv9853195,essv9853197,essv9853196,essv9853202,essv9853207,essv9853200,essv9853201,essv9853206,essv9853203,essv9853204,essv9853205,essv9853214,essv9853213,essv9853211,essv9853212,essv9853216,essv9853215 M 2504 0 41 PEX14 HG00551,HG01443,HG02051,HG02325,HG02339,HG02433,HG02476,HG02621,HG02703,HG02855,HG02887,HG02952,HG02976,HG03025,HG03162,HG03189,HG03199,HG03304,HG03352,HG03410,HG03449,HG03521,NA18499,NA18870,NA18917,NA19019,NA19041,NA19092,NA19098,NA19138,NA19338,NA19347,NA19351,NA19372,NA19380,NA19399,NA19713,NA20296,NA20317,NA20318,NA20351 esv2662921 1 10543553 10545994 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5518392,essv6400559,essv5786737,essv6578484,essv5653749,essv5967521,essv5809170,essv6012579,essv6283446,essv6081180,essv5923144 M 1151 0 11 PEX14 NA18499,NA19138,NA19313,NA19338,NA19347,NA19372,NA19380,NA19399,NA19713,NA20296,NA20317 esv2421360 1 10543836 10545046 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5057594,essv5122639,essv5125662,essv5087529,essv5151994,essv5111430,essv5118967,essv5148686,essv5079670,essv5061676,essv5023863,essv5010570,essv5072629,essv5120264,essv5154504,essv5088559,essv5142946,essv5115009,essv5005178,essv5099736,essv5160849,essv5138311,essv5145841,essv5074992,essv5030172,essv5151853,essv5160550,essv5102680,essv5094667,essv5043282,essv5037011 M 1184 0 31 PEX14 NA07045,NA18497,NA18499,NA18870,NA18917,NA18930,NA19010,NA19041,NA19098,NA19138,NA19178,NA19180,NA19192,NA19194,NA19347,NA19399,NA19713,NA19983,NA20288,NA21295,NA21333,NA21339,NA21356,NA21390,NA21399,NA21401,NA21418,NA21436,NA21634,NA21636,NA21682 nsv2521 1 10553530 10598171 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7460 M 9 0 1 PEX14 NA12156 nsv8435 1 10568184 10572374 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24613 M 31 1 0 PEX14 NA18942 nsv545395 1 10584672 10613660 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709921 M 17421 0 1 PEX14 nsv1122295 1 10587488 10587548 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969746 M 2 0 1 PEX14 KWS2 nsv1015079 1 10611403 10645176 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478770 M 29084 0 1 PEX14 esv3577733 1 10616287 10626248 CNV loss Uddin_et_al_2014 25503493 SNP array essv9796755 M 873 0 1 PEX14 400312CR nsv1009596 1 10626249 10652605 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3697890 M 29084 0 1 PEX14 esv2665377 1 10636608 10644047 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5594923,essv6473433,essv5706757,essv6424485,essv5520917,essv6439025,essv5429703,essv6306352,essv6266846,essv6184945,essv5972417,essv6051253,essv6246970,essv5984430,essv6575127 M 1151 0 15 PEX14 HG00531,HG00580,HG00595,HG00610,HG00650,HG00654,HG00692,NA18545,NA18560,NA18574,NA18596,NA18627,NA18631,NA19072,NA19088 esv2743685 1 10636609 10644050 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6832592,essv6679160,essv6902524,essv6883252,essv6821174,essv6669155,essv6839962,essv6689252,essv6859178,essv6748276,essv6916640,essv6853226,essv6773433,essv6892313,essv6898606,essv6863948,essv6874696,essv6666889,essv6925683 M 96 0 19 PEX14 SSM003,SSM005,SSM008,SSM013,SSM019,SSM030,SSM033,SSM036,SSM066,SSM079,SSM082,SSM084,SSM087,SSM088,SSM089,SSM092,SSM095,SSM098,SSM100 esv3585202 1 10636627 10644066 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853240,essv9853223,essv9853222,essv9853217,essv9853221,essv9853218,essv9853220,essv9853219,essv9853230,essv9853225,essv9853239,essv9853224,essv9853229,essv9853226,essv9853228,essv9853227,essv9853233,essv9853238,essv9853232,essv9853231,essv9853234,essv9853237,essv9853236,essv9853235,essv9853271,essv9853241,essv9853246,essv9853272,essv9853242,essv9853245,essv9853244,essv9853243,essv9853249,essv9853254,essv9853248,essv9853247,essv9853253,essv9853252,essv9853251,essv9853250,essv9853256,essv9853270,essv9853261,essv9853255,essv9853260,essv9853257,essv9853258,essv9853259,essv9853262,essv9853269,essv9853264,essv9853263,essv9853265,essv9853268,essv9853267,essv9853266,essv9853277,essv9853286,essv9853274,essv9853273,essv9853276,essv9853275,essv9853285,essv9853280,essv9853279,essv9853278,essv9853284,essv9853281,essv9853283,essv9853282,essv9853288,essv9853287,essv9853289,essv9853292,essv9853291,essv9853290 M 2504 0 76 PEX14 HG00531,HG00580,HG00595,HG00610,HG00650,HG00654,HG00692,HG00717,HG01046,HG01403,HG01600,HG01794,HG01797,HG01801,HG01813,HG01841,HG01842,HG01845,HG01848,HG01849,HG01850,HG01868,HG01869,HG01874,HG02017,HG02028,HG02031,HG02032,HG02035,HG02040,HG02049,HG02078,HG02084,HG02085,HG02086,HG02088,HG02127,HG02141,HG02164,HG02181,HG02351,HG02355,HG02367,HG02373,HG02374,HG02375,HG02379,HG02382,HG02384,HG02392,HG02396,HG02398,HG02399,HG02402,HG02409,HG02522,HG02597,HG02604,HG03598,HG03826,HG03920,HG03925,HG04152,NA18545,NA18550,NA18560,NA18574,NA18596,NA18627,NA18631,NA18647,NA18740,NA18747,NA19072,NA19088,NA19090 nsv517464 1 10638604 10643197 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv679135,nssv681545,nssv652091,nssv683372,nssv685750,nssv693755 M 2026 0 6 PEX14 nsv818777 1 10638604 10643197 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417173 M 112 0 1 PEX14 NA18550 esv275132 1 10656324 10657912 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586077 M 1250 0 1 PEX14 esv3577734 1 10671392 10681703 CNV loss Uddin_et_al_2014 25503493 SNP array essv9796866,essv9796977 M 873 0 2 PEX14 401427CB,401519SA dgv105n54 1 10673094 10796866 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545399,nsv545398,nsv545396,nsv545402,nsv545397 M 17421 0 5 CASZ1,PEX14 1780862093_A,1780862573_A dgv4n27 1 10673194 10796866 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv464505,nsv465061 M 1557 0 2 CASZ1,PEX14 1780862093_A,1780862573_A nsv953454 1 10676301 10784700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001745 M 1 0 1 CASZ1,PEX14 BILGI_BIOE esv29966 1 10676800 10874152 CNV loss Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv84205 M 2 0 1 CASZ1,PEX14 HuRef nsv828030 1 10677562 10795161 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436327 M 31 1 0 CASZ1,PEX14 NA18542 nsv545400 1 10684098 10842021 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709925 M 17421 0 1 CASZ1,PEX14 nsv464949 1 10690948 10757199 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540805 M 1557 0 1 CASZ1 1780862345_A nsv545401 1 10690948 10757199 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173667 M 17421 0 1 CASZ1 1780862345_A nsv525693 1 10694125 10840905 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701852 M 2026 0 1 CASZ1 nsv828141 1 10695477 10704197 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423940 M 31 1 0 CASZ1 NA18947 nsv828252 1 10697810 10703034 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433409 M 31 1 0 CASZ1 NA18526 nsv828364 1 10697810 10764164 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440798 M 31 1 0 CASZ1 NA18969 nsv1076090 1 10698999 10699300 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767973 M 1 0 1 CASZ1 KWP1 nsv1126176 1 10699000 10699300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984405 M 2 0 1 CASZ1 KWS1 nsv436924 1 10704688 10732269 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466805 M 60 0 1 CASZ1 NA10847 nsv832314 1 10704811 10859919 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442696,nssv1442718,nssv1442707 M 95 0 3 CASZ1 nsv438081 1 10706091 10717597 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468296,nssv468407 M 269 0 2 CASZ1 NA10847,NA12146 nsv545403 1 10709441 10750432 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709926 M 17421 0 1 CASZ1 nsv508858 1 10710624 10813210 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619768 M 4 1 0 CASZ1 NA10860 nsv818888 1 10719645 10750432 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417515 M 112 0 1 CASZ1 NA18968 dgv42e59 1 10721265 10723063 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3385957,esv3442563,esv3359154 M 185 3 0 CASZ1 NA19238,NA19239,NA19240 esv2743697 1 10721981 10722585 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6813162,essv6682818,essv6793275,essv6946483,essv6843877,essv6859179,essv6929054,essv6696984,essv6725845,essv6675193,essv6853227,essv6868704,essv6954733,essv6703857,essv6789144,essv6797441,essv6876721 M 96 0 17 CASZ1 SSM012,SSM020,SSM024,SSM026,SSM032,SSM034,SSM038,SSM040,SSM046,SSM070,SSM071,SSM072,SSM077,SSM085,SSM087,SSM088,SSM090 esv997282 1 10731782 10745649 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564310 M 3 0 1 CASZ1 HuRef esv2758921 1 10742502 11055147 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757723 M 270 0 12 C1orf127,CASZ1 NA10846,NA10857,NA12234,NA12248,NA18504,NA18558,NA18563,NA18570,NA18854,NA18970,NA18987,NA19143 nsv1075150 1 10750999 10756100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772699 M 1 0 1 CASZ1 KWP1 nsv8546 1 10752927 10756767 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28027,nssv28926 M 31 2 0 CASZ1 NA07029,NA12740 nsv1121748 1 10754100 10755800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968397 M 2 0 1 CASZ1 KWS2 nsv465172 1 10757199 10796866 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541028 M 1557 0 1 CASZ1 1780862416_A nsv545404 1 10757199 10796866 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173669 M 17421 0 1 CASZ1 1780862416_A nsv465283 1 10767902 10815421 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541114 M 1557 0 1 CASZ1 NINDS_198 nsv545405 1 10767902 10815421 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173670 M 17421 0 1 CASZ1 NINDS_198 esv2743708 1 10804026 10805348 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6756546,essv6961543,essv6744928,essv6906092,essv6933297,essv6742133,essv6843878,essv6839963,essv6800709,essv6807366,essv6679161,essv6950545,essv6747768,essv6784521,essv6859180,essv6748287,essv6769510,essv6764155,essv6816574,essv6718843,essv6759037,essv6972330,essv6921709,essv6816676,essv6773434,essv6735972,essv6853228,essv6847004,essv6761848,essv6910034,essv6863949,essv6733475,essv6750590,essv6703858,essv6707259,essv6695621,essv6753490,essv6925685,essv6876732,essv6666890,essv6738805,essv6874698 M 96 0 42 CASZ1 SSM002,SSM006,SSM007,SSM008,SSM009,SSM010,SSM012,SSM014,SSM015,SSM018,SSM019,SSM021,SSM025,SSM027,SSM029,SSM030,SSM033,SSM040,SSM041,SSM049,SSM050,SSM052,SSM053,SSM055,SSM056,SSM057,SSM058,SSM059,SSM061,SSM062,SSM063,SSM065,SSM066,SSM075,SSM078,SSM084,SSM085,SSM086,SSM087,SSM088,SSM089,SSM092 esv2743719 1 10804518 10804667 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6906092,essv6807366,essv6859180,essv6847004,essv6863949,essv6707259 M 96 0 6 CASZ1 SSM014,SSM041,SSM075,SSM086,SSM088,SSM089 nsv1113075 1 10829601 10829667 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967965 M 2 0 1 CASZ1 KWS2 esv3435817 1 10836465 10838763 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691738 M 185 1 0 CASZ1 NA19240 esv3443222 1 10837465 10838763 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691739 M 185 1 0 CASZ1 NA19238 nsv159406 1 10845226 10845226 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177984 M 24 CASZ1 nsv953455 1 10850201 10857400 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001756 M 1 0 1 CASZ1 BILGI_BIOE nsv1075563 1 10852199 10857400 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769563 M 1 0 1 CASZ1 KWP1 nsv1118100 1 10852200 10852900 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980319 M 2 0 1 CASZ1 KWS1 nsv1143435 1 10856000 10856500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980633 M 2 0 1 CASZ1 KWS1 nsv1144350 1 10886704 10886770 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995101 M 2 0 1 "" KWS1 nsv832425 1 10903845 11122975 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442741,nssv1442729 M 95 0 2 C1orf127,MASP2,SRM,TARDBP dgv43e59 1 10912665 10914263 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3401813,esv3379915 M 185 2 0 "" NA19239,NA19240 nsv1151297 1 10912999 10914400 CNV duplication John_et_al_2014 26484159 Sequencing nssv4003857 M 1 1 0 "" KWB1 esv2418090 1 10913373 10913836 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4522724 M 1 0 1 "" NA18507 esv2659328 1 10913511 10913622 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5711033,essv6516322 M 1151 0 2 "" HG01389,NA19360 nsv545406 1 10915507 10935232 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709927 M 17421 0 1 "" esv3585204 1 10935132 10937045 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853315 M 2504 0 1 "" HG02325 esv27036 1 10951426 10952195 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19765 M 40 0 1 "" NA19147 esv3585205 1 10954251 10956119 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853337,essv9853336,essv9853335,essv9853317,essv9853334,essv9853316,essv9853319,essv9853333,essv9853324,essv9853318,essv9853323,essv9853320,essv9853322,essv9853321,essv9853327,essv9853332,essv9853326,essv9853325,essv9853328,essv9853331,essv9853330,essv9853329,essv9853341,essv9853340,essv9853339,essv9853338 M 2504 0 26 "" HG00255,HG00257,HG00327,HG00640,HG01047,HG01188,HG01248,HG01286,HG01441,HG01762,HG02348,HG02490,HG03015,HG03234,HG03235,HG03673,HG03869,HG03985,HG04235,NA20544,NA20827,NA20876,NA20882,NA20896,NA21086,NA21102 esv2665603 1 10954262 10956128 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5574397,essv6392155,essv6506565,essv6336021,essv6102736,essv6214075 M 1151 0 6 "" HG00257,HG00327,HG00640,HG01047,HG01188,HG01441 esv3544566 1 10954262 10956161 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9743313 M 767 0 1 "" esv3585206 1 10968337 10971432 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853342,essv9853343 M 2504 0 2 "" HG00306,HG01756 esv3585207 1 10981542 10986132 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853347,essv9853346,essv9853345,essv9853344,essv9853349,essv9853348,essv9853350,essv9853351 M 2504 0 8 "" HG01131,HG01431,HG01605,HG01676,HG03490,NA12342,NA20513,NA20852 nsv516264 1 10983951 10984562 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv655703,nssv680546,nssv662101,nssv676652,nssv688415,nssv667169,nssv693249,nssv683701 M 2026 0 8 "" esv2576089 1 10993351 10993742 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5340923 M 1 0 1 "" NA18507 esv3585208 1 10996386 11005249 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853352 M 2504 0 1 "" HG01967 nsv508869 1 11016257 11068516 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621082 M 4 1 0 C1orf127 NA15510 esv3350549 1 11030880 11031494 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808880 M 185 1 0 C1orf127 NA12878 esv3585209 1 11037040 11038122 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853353 M 2504 0 1 C1orf127 HG00159 esv2672799 1 11037099 11038109 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6152639,essv5983863 M 1151 0 2 C1orf127 HG00159,NA12275 nsv1120069 1 11038106 11038308 OTHER inversion Alsmadi_et_al_2014 24896259 Sequencing nssv3960811 M 2 0 0 C1orf127 KWS1 esv1628805 1 11043232 11043969 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3981893 M 2 0 1 "" HuRef esv3544788 1 11047331 11047587 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9743535 M 767 0 1 "" dgv35n106 1 11047345 11047582 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1129868,nsv1111842 M 2 0 1 "" KWS2 esv2662381 1 11047366 11047568 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5485570,essv6232497,essv5451468,essv5956916,essv5440880,essv6539405,essv5510919,essv6263141,essv5601699,essv6574670,essv5783768,essv5825190,essv5805915,essv6220755,essv5607976,essv6201977,essv5545353,essv6190650,essv5672754,essv5930700,essv5582376,essv6402208,essv5425046,essv6404905,essv5717658,essv5936736,essv5525040,essv6409136,essv5530106,essv6467569,essv5751467,essv6279130,essv5816499,essv6555945,essv5439128,essv6465606,essv5697224,essv6411635,essv5786227,essv6523698,essv5579407,essv5855547,essv5458362,essv6415869,essv5548051,essv6064408,essv5699324,essv6416147,essv5564829,essv6559648,essv5781072,essv6170651,essv5750022,essv6418784,essv5455746,essv5960148,essv5739593,essv6424915,essv5639999,essv6287316,essv5544517,essv6007818,essv5713743,essv6431577,essv5681928,essv6433432,essv5766577,essv6241958,essv5513511,essv6128419,essv5505243,essv6437321,essv5447251,essv6240799,essv5452933,essv6439577,essv5561746,essv6196104,essv5612890,essv6442607,essv5441133,essv6445439,essv5720584,essv6221787,essv5795829,essv6448967,essv5679130,essv6545229,essv5474614,essv6253209,essv5573327,essv6009754,essv5547299,essv6202367,essv5648267,essv6109622,essv5619379,essv6024297,essv5583520,essv6225298,essv5405619,essv5973037,essv5704840,essv6260030,essv5525759,essv5995402,essv5739901,essv5962033,essv5666478,essv5920462,essv5627126,essv6236434,essv5709547,essv5931041,essv5569369,essv6299525,essv5517160,essv6300077,essv5524322,essv6096098,essv5497467,essv6154630,essv5488718,essv5929512,essv5430063,essv5958889,essv5434105,essv6534157,essv5555386,essv5939117,essv5470616,essv6003015,essv5689219,essv6539880,essv5663133,essv6305333,essv5599961,essv5851731,essv5717769,essv6305653,essv5630354,essv6583916,essv5584705,essv6146736,essv5655334,essv5940305,essv5743147,essv6559022,essv5693266,essv6561520,essv5697634,essv6162208,essv5485064,essv6316900,essv5457022,essv6316945,essv5549122,essv5976608,essv5557476,essv6176945,essv5701236,essv5823600,essv5738792,essv6321049,essv5442154,essv6321461,essv5767747,essv6045511,essv5696708,essv5868985,essv5683765,essv6091590,essv5778207,essv6515497,essv5615971,essv6269166,essv5473452,essv6149338,essv5538199,essv5947430,essv5400161,essv6287952,essv5599018,essv6326493,essv5530612,essv6329390,essv5573427,essv5853157,essv5869025,essv6332073,essv6333252,essv5960330,essv6512722,essv6335154,essv5966696,essv6335635,essv6596570,essv6337611,essv6049273,essv6068969,essv6584690,essv6021875,essv6346110,essv6346323,essv6346694,essv6508160,essv5903998,essv5826318,essv6538800,essv6350427,essv5868341,essv6513314,essv6252506,essv6070651,essv6227774,essv6353241,essv5964103,essv6130655,essv6234478,essv5980281,essv6548431,essv6357302,essv6236805,essv6583201,essv6062839,essv6361865,essv6362235,essv5871565,essv6290449,essv6202839,essv6220218,essv6528587,essv5851900,essv6471514,essv6093483,essv6193841,essv6375908,essv6308605,essv6114765,essv6138378,essv6053443,essv6380770,essv6053161,essv6508632 M 1151 0 244 "" HG00098,HG00103,HG00111,HG00115,HG00116,HG00139,HG00141,HG00145,HG00154,HG00159,HG00176,HG00189,HG00239,HG00249,HG00250,HG00252,HG00268,HG00278,HG00308,HG00310,HG00313,HG00318,HG00324,HG00326,HG00346,HG00353,HG00357,HG00361,HG00368,HG00372,HG00375,HG00419,HG00422,HG00437,HG00442,HG00463,HG00464,HG00478,HG00512,HG00524,HG00551,HG00581,HG00608,HG00637,HG00641,HG00656,HG00683,HG00690,HG00699,HG00732,HG00734,HG00736,HG01051,HG01052,HG01069,HG01082,HG01107,HG01124,HG01134,HG01170,HG01174,HG01177,HG01190,HG01204,HG01251,HG01357,HG01374,HG01377,HG01383,HG01384,HG01455,HG01456,HG01491,HG01522,HG01551,NA07056,NA07346,NA07347,NA07357,NA11920,NA11933,NA11994,NA12045,NA12058,NA12154,NA12155,NA12273,NA12749,NA12763,NA12775,NA12827,NA12829,NA12843,NA18486,NA18489,NA18499,NA18505,NA18510,NA18517,NA18519,NA18523,NA18534,NA18542,NA18543,NA18546,NA18548,NA18564,NA18593,NA18596,NA18602,NA18612,NA18631,NA18632,NA18853,NA18856,NA18867,NA18874,NA18908,NA18916,NA18917,NA18923,NA18924,NA18933,NA18953,NA19058,NA19085,NA19114,NA19116,NA19129,NA19172,NA19189,NA19197,NA19235,NA19236,NA19247,NA19257,NA19312,NA19313,NA19315,NA19319,NA19327,NA19331,NA19332,NA19346,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19375,NA19376,NA19377,NA19380,NA19381,NA19382,NA19383,NA19384,NA19390,NA19391,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19401,NA19403,NA19404,NA19428,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19440,NA19443,NA19448,NA19449,NA19451,NA19453,NA19455,NA19457,NA19461,NA19466,NA19467,NA19472,NA19661,NA19663,NA19664,NA19670,NA19684,NA19703,NA19704,NA19711,NA19712,NA19717,NA19720,NA19759,NA19761,NA19770,NA19788,NA19818,NA19819,NA19834,NA19835,NA19900,NA19901,NA19908,NA19916,NA19920,NA19985,NA20127,NA20276,NA20281,NA20287,NA20317,NA20340,NA20342,NA20344,NA20346,NA20348,NA20356,NA20505,NA20513,NA20516,NA20517,NA20536,NA20581,NA20586,NA20761,NA20766,NA20771,NA20783,NA20786,NA20790,NA20796,NA20797,NA20804,NA20805,NA20813 nsv954749 1 11047515 11047699 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000505 M 1 0 1 "" BILGI_BIOE esv3450829 1 11051365 11053963 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691745 M 185 1 0 "" NA12878 dgv13e199 1 11054562 11056071 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2665986,esv2657332 M 1151 0 7 "" HG00537,HG00596,NA19350,NA19375,NA19383,NA19776,NA20340 esv2743730 1 11054636 11055761 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6902525,essv6807367,essv6800821,essv6921710,essv6804397,essv6910035 M 96 0 6 "" SSM002,SSM013,SSM015,SSM018,SSM074,SSM075 esv3585210 1 11054703 11056117 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853354,essv9853357,essv9853356,essv9853355,essv9853358,essv9853360,essv9853359 M 2504 0 7 "" HG02484,HG02771,NA18489,NA19350,NA19375,NA19383,NA20340 esv2592186 1 11059704 11063290 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5335168 M 1 0 1 "" NA18507 nsv545407 1 11060075 11438026 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709928 M 17421 1 0 ANGPTL7,EXOSC10,MASP2,MTOR,MTOR-AS1,SRM,TARDBP,UBIAD1 esv3585211 1 11060112 11062310 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853364,essv9853461,essv9853397,essv9853363,essv9853362,essv9853361,essv9853396,essv9853379,essv9853365,essv9853370,essv9853369,essv9853366,essv9853368,essv9853367,essv9853373,essv9853378,essv9853372,essv9853371,essv9853377,essv9853374,essv9853376,essv9853375,essv9853386,essv9853381,essv9853395,essv9853380,essv9853385,essv9853382,essv9853384,essv9853383,essv9853394,essv9853389,essv9853388,essv9853387,essv9853393,essv9853390,essv9853392,essv9853391,essv9853428,essv9853411,essv9853402,essv9853401,essv9853398,essv9853400,essv9853399,essv9853405,essv9853404,essv9853403,essv9853410,essv9853409,essv9853406,essv9853408,essv9853407,essv9853427,essv9853418,essv9853413,essv9853412,essv9853417,essv9853414,essv9853416,essv9853415,essv9853421,essv9853426,essv9853420,essv9853419,essv9853422,essv9853425,essv9853424,essv9853423,essv9853434,essv9853429,essv9853459,essv9853460,essv9853433,essv9853430,essv9853432,essv9853431,essv9853437,essv9853442,essv9853436,essv9853435,essv9853438,essv9853441,essv9853439,essv9853440,essv9853444,essv9853449,essv9853458,essv9853443,essv9853448,essv9853445,essv9853447,essv9853446,essv9853452,essv9853457,essv9853451,essv9853450,essv9853453,essv9853456,essv9853455,essv9853454,essv9853489,essv9853473,essv9853464,essv9853463,essv9853462,essv9853472,essv9853467,essv9853466,essv9853465,essv9853471,essv9853468,essv9853470,essv9853469,essv9853475,essv9853480,essv9853522,essv9853474,essv9853479,essv9853476,essv9853478,essv9853477,essv9853488,essv9853482,essv9853487,essv9853481,essv9853486,essv9853483,essv9853485,essv9853484,essv9853504,essv9853495,essv9853491,essv9853490,essv9853521,essv9853494,essv9853493,essv9853492,essv9853498,essv9853503,essv9853497,essv9853496,essv9853499,essv9853502,essv9853501,essv9853500,essv9853506,essv9853511,essv9853520,essv9853505,essv9853510,essv9853507,essv9853509,essv9853508,essv9853514,essv9853519,essv9853513,essv9853512,essv9853515,essv9853518,essv9853517,essv9853516,essv9853527,essv9853536,essv9853525,essv9853526,essv9853524,essv9853523,essv9853530,essv9853535,essv9853529,essv9853528,essv9853534,essv9853531,essv9853533,essv9853532,essv9853542,essv9853551,essv9853537,essv9853552,essv9853541,essv9853538,essv9853539,essv9853540,essv9853550,essv9853545,essv9853544,essv9853543,essv9853549,essv9853546,essv9853548,essv9853547,essv9853567,essv9853558,essv9853553,essv9853557,essv9853554,essv9853556,essv9853555,essv9853561,essv9853566,essv9853560,essv9853559,essv9853562,essv9853565,essv9853564,essv9853563,essv9853569,essv9853574,essv9853568,essv9853573,essv9853570,essv9853572,essv9853571,essv9853577,essv9853576,essv9853575,essv9853578 M 2504 0 218 "" HG00638,HG00640,HG01075,HG01086,HG01097,HG01161,HG01167,HG01176,HG01326,HG01414,HG01708,HG01880,HG01882,HG01883,HG01886,HG02051,HG02053,HG02090,HG02095,HG02283,HG02309,HG02334,HG02419,HG02442,HG02461,HG02464,HG02476,HG02481,HG02489,HG02496,HG02505,HG02508,HG02549,HG02561,HG02568,HG02571,HG02573,HG02582,HG02585,HG02594,HG02595,HG02614,HG02628,HG02635,HG02645,HG02666,HG02667,HG02715,HG02728,HG02757,HG02759,HG02763,HG02769,HG02771,HG02799,HG02814,HG02817,HG02819,HG02837,HG02852,HG02860,HG02870,HG02879,HG02881,HG02888,HG02891,HG02895,HG02946,HG02952,HG03021,HG03048,HG03054,HG03055,HG03057,HG03061,HG03063,HG03064,HG03069,HG03072,HG03079,HG03085,HG03100,HG03108,HG03123,HG03126,HG03127,HG03129,HG03130,HG03133,HG03193,HG03195,HG03202,HG03224,HG03246,HG03265,HG03270,HG03271,HG03291,HG03297,HG03300,HG03301,HG03304,HG03311,HG03342,HG03351,HG03366,HG03367,HG03369,HG03376,HG03382,HG03385,HG03397,HG03432,HG03439,HG03445,HG03452,HG03464,HG03469,HG03470,HG03478,HG03484,HG03485,HG03515,HG03518,HG03547,HG03559,HG03565,HG03572,HG03577,HG03858,NA18489,NA18499,NA18502,NA18507,NA18508,NA18510,NA18603,NA18858,NA18908,NA18912,NA18916,NA18917,NA18923,NA19020,NA19026,NA19030,NA19043,NA19096,NA19099,NA19118,NA19137,NA19144,NA19160,NA19171,NA19184,NA19190,NA19197,NA19207,NA19209,NA19238,NA19248,NA19257,NA19308,NA19312,NA19314,NA19315,NA19316,NA19319,NA19327,NA19346,NA19347,NA19350,NA19351,NA19355,NA19375,NA19376,NA19380,NA19383,NA19390,NA19395,NA19397,NA19401,NA19403,NA19429,NA19434,NA19437,NA19443,NA19445,NA19448,NA19456,NA19463,NA19466,NA19467,NA19468,NA19473,NA19475,NA19700,NA19703,NA19704,NA19711,NA19712,NA19834,NA19835,NA19909,NA19916,NA19917,NA19982,NA20276,NA20278,NA20287,NA20291,NA20339,NA20340,NA20342,NA20346,NA20348,NA20356,NA20362 esv2662761 1 11060114 11062306 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5791211,essv6500641,essv5419469,essv6058296,essv5668688,essv6432554,essv5829346,essv6441657,essv5662489,essv6143553,essv5532380,essv6220301,essv5547308,essv6028616,essv5764472,essv6086288,essv5472909,essv6183321,essv5625352,essv6302129,essv5483712,essv6003595,essv5497175,essv6566613,essv5603320,essv6195875,essv5486702,essv6481119,essv5643423,essv5904274,essv5750123,essv6579638,essv5458820,essv6467649,essv5602019,essv6060257,essv5716359,essv6263697,essv5531541,essv6345451,essv6240552,essv6586106,essv6353285,essv6458991,essv6356685,essv6380777,essv6561507 M 1151 0 47 "" HG00638,HG00640,HG01167,NA18489,NA18499,NA18510,NA18603,NA19248,NA19312,NA19346,NA19347,NA19350,NA19355,NA19359,NA19371,NA19375,NA19376,NA19380,NA19382,NA19383,NA19390,NA19396,NA19397,NA19401,NA19403,NA19429,NA19434,NA19437,NA19443,NA19444,NA19445,NA19456,NA19463,NA19466,NA19467,NA19473,NA19700,NA19703,NA19704,NA19711,NA19712,NA19834,NA19835,NA19909,NA19916,NA19982,NA20346 esv23739 1 11060167 11061907 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14228 M 40 0 1 "" NA19190 nsv945768 1 11082214 11084125 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754931,nssv1754954,nssv1754925,nssv1751922,nssv1754914,nssv1754941,nssv1754981,nssv1754944,nssv1754909,nssv1754952,nssv1754921,nssv1754958,nssv1754932,nssv1754946,nssv1754918,nssv1754948,nssv1754923,nssv1754949,nssv1754904,nssv1754967,nssv1751910,nssv1754977,nssv1754982,nssv1754968,nssv1754906,nssv1754929,nssv1754924,nssv1754965,nssv1754920,nssv1754959,nssv1754910,nssv1754961,nssv1754980,nssv1754971,nssv1754912,nssv1754933,nssv1751909,nssv1754936,nssv1754922,nssv1754938,nssv1754927,nssv1754942,nssv1754907,nssv1754976,nssv1751908,nssv1754970,nssv1754908,nssv1751913,nssv1751905,nssv1754975,nssv1754983,nssv1754928,nssv1754911,nssv1754957,nssv1754917,nssv1754963,nssv1751906,nssv1754956,nssv1754905,nssv1754951,nssv1754934,nssv1754945,nssv1754916,nssv1754966,nssv1751911,nssv1754964,nssv1754913,nssv1751920,nssv1754915,nssv1751915,nssv1754919,nssv1754953,nssv1751912,nssv1751914,nssv1754926,nssv1754973,nssv1754978,nssv1754969,nssv1754955,nssv1754939,nssv1751916,nssv1754940,nssv1754962,nssv1754947,nssv1754943,nssv1754930,nssv1754960,nssv1754979,nssv1751919,nssv1754903,nssv1754974,nssv1751921,nssv1751917,nssv1754935,nssv1754950,nssv1754972,nssv1754937 M 97 10 0 TARDBP HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv25881 1 11097562 11106051 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13377,esv21307 M 40 2 1 MASP2 NA06985,NA12044,NA19257 esv2660954 1 11097612 11106315 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5962966 M 1151 0 1 MASP2 NA19257 esv3585212 1 11097642 11106422 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853583,essv9853582,essv9853581,essv9853580,essv9853579 M 2504 0 5 MASP2 HG02010,NA19035,NA19116,NA19153,NA19257 nsv953456 1 11098801 11120200 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001767 M 1 0 1 MASP2,SRM BILGI_BIOE nsv545408 1 11099430 11102144 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709929 M 17421 1 0 MASP2 dgv106n54 1 11099833 11101982 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545409,nsv545410 M 17421 0 2 MASP2 nsv545411 1 11100172 11101982 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709932 M 17421 1 0 MASP2 esv2743741 1 11101187 11101447 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6668940 M 96 0 1 MASP2 SSM031 nsv956625 1 11101792 11102031 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000475 M 1 0 1 MASP2 BILGI_BIOE nsv1133809 1 11102022 11102118 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969380 M 2 0 1 MASP2 KWS2 nsv474577 1 11118357 11118357 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012643 M 9 1 0 SRM NA18956 nsv955233 1 11159501 11161900 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001778 M 1 0 1 EXOSC10 BILGI_BIOE nsv1122297 1 11208714 11208783 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969748 M 2 0 1 MTOR,MTOR-AS1 KWS2 esv3303581 1 11212385 11212386 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7743300,essv7754450,essv7741490 M 185 3 0 MTOR NA18871,NA18916,NA19005 esv3427172 1 11212404 11212520 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898624,essv8898626,essv8898623 M 185 3 0 MTOR NA18871,NA18916,NA19005 esv2658000 1 11230265 11232333 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5587519,essv5944809,essv6345116 M 1151 0 3 MTOR HG01384,NA18868,NA19316 esv3585215 1 11230358 11232287 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853630,essv9853629,essv9853619,essv9853628,essv9853618,essv9853627,essv9853622,essv9853621,essv9853620,essv9853623,essv9853626,essv9853625,essv9853624,essv9853633,essv9853634,essv9853631,essv9853632,essv9853637,essv9853636,essv9853635,essv9853638,essv9853640,essv9853639 M 2504 0 23 MTOR HG01384,HG01912,HG02010,HG02613,HG02634,HG02804,HG02807,HG02813,HG02836,HG02854,HG03077,HG03078,HG03095,HG03109,HG03199,HG03209,HG03436,HG03460,HG03583,NA18868,NA19017,NA19222,NA19316 nsv945769 1 11292194 11293849 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751945,nssv1752951,nssv1751931,nssv1752919,nssv1751924,nssv1752889,nssv1751939,nssv1752904,nssv1751947,nssv1751948,nssv1752940,nssv1752880,nssv1752938,nssv1752915,nssv1752935,nssv1752906,nssv1751930,nssv1752907,nssv1751936,nssv1752888,nssv1751941,nssv1752924,nssv1752881,nssv1752892,nssv1751927,nssv1752916,nssv1752934,nssv1752948,nssv1751926,nssv1752930,nssv1752936,nssv1752900,nssv1751944,nssv1752890,nssv1751925,nssv1752893,nssv1751928,nssv1752926,nssv1751937,nssv1752932,nssv1751949,nssv1752885,nssv1751934,nssv1752897,nssv1752941,nssv1752928,nssv1751946,nssv1752952,nssv1752879,nssv1752921,nssv1751938,nssv1752908,nssv1751935,nssv1752944,nssv1752933,nssv1752913,nssv1752937,nssv1752891,nssv1751932,nssv1752912,nssv1752943,nssv1752946,nssv1751933,nssv1752929,nssv1752878,nssv1752895,nssv1752939,nssv1752925,nssv1751942,nssv1752911,nssv1751943,nssv1752927,nssv1752922,nssv1751923,nssv1752899,nssv1752882,nssv1752905,nssv1752903,nssv1752954,nssv1752883,nssv1752876,nssv1752914,nssv1752896,nssv1752947,nssv1752901,nssv1752949,nssv1752884,nssv1752877,nssv1752923,nssv1752950,nssv1752918,nssv1752945,nssv1752910,nssv1752917,nssv1752902,nssv1752894,nssv1751950 M 97 10 0 MTOR HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474152 1 11309323 11309323 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019622 M 9 1 0 MTOR NA18507 nsv1144351 1 11337149 11337232 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995102 M 2 0 1 UBIAD1 KWS1 nsv1137729 1 11370587 11370640 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990237 M 2 0 1 "" KWS2 nsv516050 1 11372638 11398365 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700989,nssv665889,nssv701963,nssv683456 M 2026 0 4 "" nsv832536 1 11388777 11562341 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442752 M 95 0 1 PTCHD2 nsv1110875 1 11406570 11406622 OTHER inversion Alsmadi_et_al_2014 24896259 Sequencing nssv3961286 M 2 0 0 "" KWS1 esv3585220 1 11412760 11416751 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853728,essv9853727,essv9853731,essv9853730,essv9853729 M 2504 0 5 "" HG00409,HG00620,HG04177,NA19082,NA19089 esv2672657 1 11412772 11416694 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5407469,essv6274262,essv5625718 M 1151 0 3 "" HG00151,HG00620,NA19082 esv3331891 1 11423295 11423305 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863674 M 185 1 0 "" NA12005 esv3329848 1 11433513 11434531 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652037 M 185 1 0 "" NA19240 esv3585221 1 11449834 11536217 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853732 M 2504 1 0 "" HG01162 nsv1002307 1 11465467 11527555 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481323 M 29084 1 0 "" esv3585222 1 11467027 11473433 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853733 M 2504 0 1 "" HG01461 esv2668404 1 11467158 11473415 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6219838,essv5984928 M 1151 0 2 "" HG01461,NA19657 nsv1137730 1 11491184 11491544 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3990238 M 2 0 1 "" KWS2 nsv465394 1 11493832 11520653 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541193 M 1557 0 1 "" 1780854097_A nsv545412 1 11493832 11520653 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173671 M 17421 0 1 "" 1780854097_A nsv528438 1 11496994 11501431 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705033 M 2026 0 1 "" nsv1075568 1 11525224 11525289 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772534 M 1 0 1 "" KWP1 dgv36n106 1 11525225 11525289 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1144352,nsv1113076 M 2 0 2 "" KWS1,KWS2 esv3545344 1 11525225 11525289 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9744091 M 767 0 1 "" nsv2632 1 11537077 11567852 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv298 M 9 1 0 PTCHD2 NA19240 esv2657750 1 11541441 11543200 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6269148 M 1151 0 1 PTCHD2 NA20586 nsv832647 1 11562347 11669596 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442763 M 95 0 1 LOC101929181,PTCHD2 nsv465505 1 11562490 11601119 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541299 M 1557 0 1 PTCHD2 HGDP00857 nsv545413 1 11562490 11601119 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173672 M 17421 0 1 PTCHD2 HGDP00857 dgv107n54 1 11562490 11626858 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545414,nsv545415 M 17421 0 3 PTCHD2 HGDP00787 nsv465727 1 11562490 11626858 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541477 M 1557 0 1 PTCHD2 HGDP00787 nsv470692 1 11575260 11622979 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547697 M 443 1 0 PTCHD2 HGDP00599 nsv521736 1 11577831 11595331 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694500 M 2026 0 1 PTCHD2 nsv955244 1 11578501 11597700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001789 M 1 0 1 PTCHD2 BILGI_BIOE esv2628262 1 11582403 11583169 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5205183 M 1 1 0 PTCHD2 NA18507 esv3380219 1 11582448 11583000 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808884 M 185 1 0 PTCHD2 NA12878 esv26916 1 11582552 11583022 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13120 M 40 0 1 PTCHD2 NA07045 dgv18n100 1 11586585 11630428 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000208,nsv999027,nsv1006388,nsv1010644,nsv1008090 M 29084 5 0 PTCHD2 esv3337006 1 11599824 11599843 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678328 M 185 1 0 "" NA12878 esv3309193 1 11599833 11599834 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839434 M 185 1 0 "" NA12878 esv3585223 1 11607635 11608681 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9853734 M 2504 0 1 "" NA20803 nsv520251 1 11614268 11626858 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697308 M 2026 0 1 "" nsv545416 1 11680283 11736410 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709935 M 17421 0 1 FBXO2,FBXO44,FBXO6,MAD2L2 esv7758 1 11682662 11683311 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30199 M 1 0 0 "" esv2570682 1 11682692 11684391 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5218562 M 1 0 1 "" NA18507 esv2017403 1 11682714 11683369 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4788047 M 1 0 1 "" NA18507 esv3208 1 11682836 11683312 CNV loss Wang_et_al_2008 18987735 Sequencing essv25649 M 1 0 1 "" YH esv3545455 1 11682840 11683237 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9744202 M 767 0 1 "" esv2743752 1 11682864 11683173 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961544,essv6824974,essv6699592,essv6747769,essv6843776,essv6821175,essv6807368,essv6718160,essv6859181,essv6780862,essv6816575,essv6946486,essv6892314,essv6972331,essv6853229,essv6889000,essv6898607,essv6707260,essv6696985,essv6863950,essv6954734 M 96 0 21 "" SSM011,SSM024,SSM026,SSM027,SSM029,SSM038,SSM039,SSM041,SSM044,SSM056,SSM068,SSM075,SSM078,SSM079,SSM080,SSM087,SSM088,SSM089,SSM097,SSM098,SSM100 esv3585224 1 11682873 11683189 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9855289,essv9855291,essv9855287,essv9855290,essv9855292,essv9855293,essv9854253,essv9855286,essv9854252,essv9854251,essv9853881,essv9853880,essv9853879,essv9854250,essv9854232,essv9854238,essv9854231,essv9854230,essv9854234,essv9854237,essv9854233,essv9854236,essv9854235,essv9854249,essv9854242,essv9854239,essv9854241,essv9854240,essv9854244,essv9854248,essv9854243,essv9854245,essv9854247,essv9854246,essv9853877,essv9855295,essv9855297,essv9855285,essv9853874,essv9855294,essv9855284,essv9855296,essv9855283,essv9854446,essv9854464,essv9854978,essv9854623,essv9855298,essv9853820,essv9853819,essv9853876,essv9853737,essv9853755,essv9853754,essv9853736,essv9853735,essv9853739,essv9853744,essv9853738,essv9853753,essv9853743,essv9853740,essv9853742,essv9853741,essv9853747,essv9853752,essv9853746,essv9853745,essv9853748,essv9853751,essv9853750,essv9853749,essv9853769,essv9853760,essv9853818,essv9853875,essv9853759,essv9853756,essv9853758,essv9853757,essv9853768,essv9853763,essv9853762,essv9853761,essv9853767,essv9853764,essv9853766,essv9853765,essv9853771,essv9853785,essv9853770,essv9853776,essv9853775,essv9853772,essv9853774,essv9853773,essv9853783,essv9853784,essv9853777,essv9853778,essv9853779,essv9853782,essv9853781,essv9853780,essv9853786,essv9853791,essv9853800,essv9853817,essv9853787,essv9853790,essv9853789,essv9853788,essv9853799,essv9853794,essv9853793,essv9853792,essv9853798,essv9853795,essv9853797,essv9853796,essv9853802,essv9853807,essv9853816,essv9853801,essv9853806,essv9853803,essv9853805,essv9853804,essv9853810,essv9853815,essv9853809,essv9853808,essv9853811,essv9853814,essv9853813,essv9853812,essv9853872,essv9853873,essv9854260,essv9854445,essv9853828,essv9853845,essv9854325,essv9854463,essv9853823,essv9853871,essv9853822,essv9853821,essv9853827,essv9853826,essv9853825,essv9853824,essv9853830,essv9853835,essv9853829,essv9853844,essv9853834,essv9853831,essv9853833,essv9853832,essv9853838,essv9853843,essv9853837,essv9853836,essv9853842,essv9853839,essv9853841,essv9853840,essv9853859,essv9853850,essv9853870,essv9854259,essv9853849,essv9853846,essv9853848,essv9853847,essv9853853,essv9853858,essv9853852,essv9853851,essv9853857,essv9853854,essv9853856,essv9853855,essv9854258,essv9853860,essv9853869,essv9853865,essv9853864,essv9853861,essv9853863,essv9853862,essv9853868,essv9853867,essv9854257,essv9853866,essv9853878,essv9854256,essv9854255,essv9854254,essv9854324,essv9854265,essv9854291,essv9854274,essv9854264,essv9854261,essv9854263,essv9854262,essv9854268,essv9854273,essv9854267,essv9854266,essv9854272,essv9854269,essv9854271,essv9854270,essv9854276,essv9854290,essv9854281,essv9854275,essv9854280,essv9854277,essv9854279,essv9854278,essv9854284,essv9854289,essv9854283,essv9854282,essv9854285,essv9854288,essv9854287,essv9854286,essv9854292,essv9854297,essv9854306,essv9854323,essv9854296,essv9854293,essv9854295,essv9854294,essv9854300,essv9854305,essv9854299,essv9854298,essv9854301,essv9854304,essv9854303,essv9854302,essv9854308,essv9854313,essv9854307,essv9854322,essv9854312,essv9854309,essv9854311,essv9854310,essv9854316,essv9854321,essv9854315,essv9854314,essv9854317,essv9854320,essv9854319,essv9854318,essv9854337,essv9854328,essv9854329,essv9854444,essv9854394,essv9854361,essv9854327,essv9854462,essv9854331,essv9854326,essv9854336,essv9854330,essv9854335,essv9854332,essv9854334,essv9854333,essv9854339,essv9854360,essv9854351,essv9854338,essv9854347,essv9854350,essv9854349,essv9854348,essv9854354,essv9854359,essv9854353,essv9854352,essv9854358,essv9854355,essv9854357,essv9854356,essv9854376,essv9854367,essv9854362,essv9854393,essv9854366,essv9854363,essv9854365,essv9854364,essv9854370,essv9854375,essv9854369,essv9854368,essv9854371,essv9854374,essv9854373,essv9854372,essv9854383,essv9854378,essv9854377,essv9854392,essv9854382,essv9854379,essv9854381,essv9854380,essv9854391,essv9854386,essv9854385,essv9854384,essv9854387,essv9854390,essv9854389,essv9854388,essv9854398,essv9854424,essv9854407,essv9854461,essv9854443,essv9854397,essv9854396,essv9854395,essv9854406,essv9854401,essv9854400,essv9854399,essv9854405,essv9854402,essv9854404,essv9854403,essv9854409,essv9854414,essv9854408,essv9854423,essv9854413,essv9854410,essv9854412,essv9854411,essv9854417,essv9854422,essv9854416,essv9854415,essv9854421,essv9854418,essv9854420,essv9854419,essv9854460,essv9854442,essv9854429,essv9854438,essv9854428,essv9854425,essv9854427,essv9854426,essv9854432,essv9854437,essv9854431,essv9854430,essv9854433,essv9854436,essv9854435,essv9854434,essv9854450,essv9854441,essv9854459,essv9854440,essv9854449,essv9854439,essv9854448,essv9854447,essv9854453,essv9854458,essv9854452,essv9854451,essv9854454,essv9854457,essv9854456,essv9854455,essv9854622,essv9854490,essv9854523,essv9854473,essv9854621,essv9854588,essv9854472,essv9854720,essv9854977,essv9854466,essv9854471,essv9854465,essv9854470,essv9854468,essv9854467,essv9854469,essv9854475,essv9854480,essv9854474,essv9854489,essv9854479,essv9854476,essv9854478,essv9854477,essv9854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M 2504 0 1811 "" 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nsv1075871 1 11682887 11683200 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769259 M 1 0 1 "" KWP1 nsv1152584 1 11682892 11683205 CNV deletion John_et_al_2014 26484159 Sequencing nssv3999764 M 1 0 1 "" KWB1 esv2666437 1 11682893 11683189 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6069127,essv5909070,essv6233682,essv5909097,essv6384433,essv5406100,essv6566294,essv5796445,essv6569738,essv5813371,essv6243536,essv5775396,essv6391020,essv5849291,essv6273913,essv5402677,essv6014220,essv5436923,essv6106601,essv5780910,essv6392714,essv5592105,essv6065078,essv5738254,essv6393200,essv5754199,essv6395990,essv5446954,essv5923301,essv5482260,essv6536967,essv5608184,essv6465350,essv5880436,essv6398118,essv5712471,essv6400393,essv5857315,essv6473176,essv5460733,essv6122221,essv5745998,essv6043812,essv5787078,essv6401729,essv5668321,essv6402099,essv5424169,essv6049398,essv5669123,essv6518434,essv5454923,essv6179787,essv5828248,essv6406016,essv5809919,essv6406132,essv5906040,essv6128141,essv5751966,essv6110671,essv5618284,essv6408719,essv5458329,essv6104142,essv5746460,essv6408943,essv5474424,essv6509873,essv5819464,essv6117695,essv5741317,essv6410768,essv5875279,essv6055418,essv5433723,essv6412112,essv5812739,essv6412404,essv5712658,essv6412682,essv5702425,essv6414119,essv5808821,essv6271479,essv5661126,essv6083360,essv5672467,essv6417107,essv5499440,essv6417539,essv5839912,essv6418149,essv5615454,essv6418416,essv5841321,essv6419689,essv5558781,essv6419779,essv5868909,essv6421410,essv5817671,essv6421586,essv5737455,essv6422703,essv5839832,essv6147026,essv5629817,essv6269978,essv5578575,essv6180585,essv5894807,essv6424899,essv5640580,essv6129411,essv5898958,essv6140973,essv5763482,essv6283412,essv5444378,essv6561298,essv5690804,essv6264894,essv5452850,essv5982179,essv5479145,essv6430887,essv5411483,essv6151630,essv5759707,essv6432073,essv5600231,essv6598135,essv5660381,essv6434220,essv5476617,essv6435480,essv5852880,essv6204806,essv5710568,essv5975165,essv5826486,essv6553770,essv5576240,essv6477760,essv5442867,essv6589368,essv5736091,essv6440097,essv5558805,essv6440258,essv5608374,essv6440826,essv5812743,essv6540014,essv5893840,essv6442648,essv5546216,essv6249129,essv5479209,essv6100086,essv5775881,essv6552516,essv5669581,essv6516429,essv5553381,essv5983438,essv5869666,essv6589373,essv5634379,essv6520760,essv5479222,essv6448619,essv5624347,essv6227114,essv5641635,essv6168833,essv5647991,essv6450709,essv5672408,essv6190557,essv5761758,essv6258583,essv5711549,essv6534292,essv5462858,essv6533518,essv5850582,essv6036623,essv5412743,essv6453746,essv5397928,essv6527102,essv5479282,essv5945843,essv5571880,essv5967078,essv5852049,essv6456261,essv5830718,essv6293684,essv5452506,essv6550906,essv5521071,essv6576113,essv5849942,essv6110908,essv5442575,essv6087619,essv5770088,essv6594399,essv5661240,essv6098539,essv5785852,essv6054490,essv5772619,essv6201458,essv5409914,essv6239560,essv5446220,essv6552870,essv5885583,essv5931786,essv5803047,essv6065167,essv5868148,essv6054982,essv5717645,essv6112283,essv5414441,essv6075318,essv5567531,essv6007125,essv5903925,essv6138203,essv5859984,essv6203243,essv5699737,essv6467818,essv5638079,essv6070056,essv5806835,essv6538567,essv5427571,essv6589387,essv5425436,essv6037551,essv5474613,essv6273781,essv5831614,essv6123568,essv5683620,essv5956894,essv5814744,essv6299803,essv5893299,essv6140244,essv5535274,essv6300361,essv5821515,essv6558742,essv5867321,essv6053356,essv5829969,essv6595440,essv5835627,essv6544955,essv5485265,essv6303125,essv5560127,essv6154775,essv5461171,essv5922270,essv5507007,essv6020444,essv5570033,essv6548578,essv5809273,essv6210235,essv5867787,essv5965760,essv5618860,essv6307393,essv5744098,essv5967652,essv5744650,essv6034102,essv5702758,essv6030100,essv5526024,essv6233114,essv5685573,essv6171737,essv5415013,essv6481083,essv5416725,essv6207467,essv5563366,essv6046909,essv5610452,essv6125574,essv5587714,essv5980735,essv5720823,essv6047461,essv5687759,essv6002753,essv5708469,essv6270993,essv5675546,essv6553862,essv5522094,essv6564760,essv5623830,essv6120509,essv5829923,essv6313623,essv5890392,essv6189940,essv5641389,essv6200209,essv5698681,essv6225523,essv5453023,essv6508975,essv5546456,essv6220406,essv5402436,essv6194176,essv5786411,essv5964035,essv5438767,essv5920491,essv5832207,essv6316134,essv5901566,essv6552901,essv5418566,essv5972969,essv5467969,essv6532577,essv5602336,essv5979364,essv5494636,essv6039488,essv5836145,essv6035531,essv5649613,essv6317680,essv5444787,essv6096230,essv5500632,essv6126389,essv5630219,essv6485043,essv5519629,essv6219472,essv5858473,essv6249441,essv5496612,essv6050319,essv5697267,essv6319235,essv5518732,essv6591262,essv5427728,essv6263345,essv5548288,essv6497022,essv5886848,essv6097913,essv5428741,essv6547713,essv5503921,essv6320865,essv5649484,essv5970170,essv5483785,essv6108329,essv5563794,essv6321500,essv5836902,essv6513087,essv5655212,essv5945198,essv5403864,essv5911609,essv5720517,essv6259703,essv5637434,essv6052328,essv5757671,essv6182623,essv5865704,essv6030563,essv5826844,essv6137682,essv5475868,essv5997457,essv5475863,essv6243975,essv5545185,essv5962682,essv5686442,essv6034457,essv5402556,essv6467000,essv5511046,essv6029991,essv5861863,essv6175490,essv5519435,essv6135443,essv5459968,essv6265147,essv5773476,essv6593293,essv5416869,essv6326527,essv5655328,essv6017111,essv5493210,essv6327317,essv5482552,essv6116320,essv5479690,essv6202739,essv5633581,essv6140282,essv5442130,essv6484816,essv5722668,essv5935816,essv5806416,essv6329357,essv5695351,essv6021392,essv5417311,essv6330776,essv5839564,essv6331013,essv5462411,essv6331288,essv5717557,essv6331953,essv5700030,essv6289109,essv5514123,essv6162853,essv5498125,essv5988683,essv5841022,essv6106292,essv5790492,essv6332951,essv5587280,essv6528943,essv5607324,essv6014844,essv5403003,essv6333758,essv5724992,essv6152051,essv5842121,essv6580968,essv5454821,essv6099515,essv5431043,essv6334420,essv5893427,essv6542212,essv5477271,essv5984541,essv5458974,essv6208725,essv5864520,essv6281475,essv5640027,essv6489604,essv5863584,essv6514480,essv5548042,essv6286902,essv5518174,essv6549109,essv5459106,essv5980228,essv5473688,essv6274056,essv5832832,essv6161776,essv5413185,essv6099956,essv5417790,essv6495125,essv5460156,essv6168685,essv5648244,essv6265236,essv5860658,essv5998575,essv5863747,essv6141116,essv5704285,essv6037011,essv5677467,essv6540515,essv5452322,essv6089478,essv5876618,essv6574251,essv5413204,essv5948685,essv5789809,essv5978567,essv5821652,essv6341473,essv5840970,essv6215098,essv5738166,essv5952587,essv5715074,essv6180765,essv5896862,essv6343272,essv5598969,essv5937635,essv5413219,essv6344223,essv5856084,essv6094004,essv5562840,essv6021587,essv5828990,essv6346521,essv5421515,essv6270635,essv5906980,essv6468675,essv5686746,essv6128976,essv5801917,essv5952596,essv5792649,essv6141294,essv5726038,essv6503435,essv5857681,essv6216608,essv5553257,essv6040668,essv5440793,essv6172356,essv5572618,essv6230453,essv5653532,essv6573031,essv5684094,essv6166147,essv5591757,essv6246278,essv5716235,essv6353139,essv5771946,essv6073118,essv5489416,essv6353246,essv5404053,essv6022514,essv5437540,essv6513811,essv5432100,essv6010254,essv5554387,essv6029891,essv6457914,essv6458255,essv6597986,essv6269794,essv6486136,essv5992410,essv6134335,essv6356526,essv6120768,essv6264799,essv6524748,essv6492389,essv6014560,essv5938441,essv6288776,essv6551177,essv6478228,essv6359553,essv6063177,essv6361727,essv6133390,essv6363717,essv6285733,essv6209742,essv6176660,essv6363642,essv6188575,essv6364857,essv5914186,essv6025435,essv6059921,essv6366054,essv6122106,essv6474848,essv6281187,essv6367383,essv6367458,essv6238225,essv6050102,essv6263424,essv6081560,essv6113754,essv6108631,essv6062060,essv6131404,essv5972844,essv6369567,essv6595206,essv6370000,essv5962321,essv6370984,essv6169902,essv6115765,essv6372240,essv6372554,essv6000530,essv6469534,essv5913244,essv6533999,essv6482091,essv6044479,essv6129376,essv6374163,essv5953568,essv6250208,essv6556822,essv6264301,essv5944276,essv6134938,essv6279042,essv6027594,essv5998087,essv6549247,essv6199540,essv6531389,essv6074854,essv6186395,essv6276195,essv6135668,essv6380194,essv6074857,essv6084532,essv6380675,essv6033065,essv6381031,essv6505671,essv6126289,essv6222503 M 1151 0 663 "" HG00096,HG00098,HG00100,HG00106,HG00108,HG00111,HG00114,HG00115,HG00117,HG00118,HG00119,HG00120,HG00122,HG00123,HG00125,HG00126,HG00127,HG00131,HG00133,HG00136,HG00137,HG00138,HG00139,HG00140,HG00141,HG00142,HG00143,HG00145,HG00147,HG00148,HG00150,HG00151,HG00152,HG00154,HG00155,HG00156,HG00157,HG00158,HG00159,HG00160,HG00171,HG00173,HG00174,HG00176,HG00177,HG00178,HG00179,HG00180,HG00181,HG00182,HG00183,HG00185,HG00186,HG00187,HG00188,HG00189,HG00190,HG00231,HG00232,HG00233,HG00236,HG00237,HG00239,HG00243,HG00244,HG00245,HG00246,HG00247,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00258,HG00259,HG00260,HG00262,HG00263,HG00264,HG00265,HG00266,HG00267,HG00268,HG00269,HG00270,HG00271,HG00272,HG00273,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00309,HG00310,HG00311,HG00312,HG00313,HG00315,HG00318,HG00319,HG00320,HG00321,HG00324,HG00325,HG00326,HG00327,HG00328,HG00329,HG00330,HG00331,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00345,HG00346,HG00353,HG00357,HG00361,HG00366,HG00367,HG00368,HG00369,HG00372,HG00373,HG00375,HG00377,HG00404,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00443,HG00448,HG00449,HG00464,HG00472,HG00473,HG00476,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00537,HG00551,HG00553,HG00554,HG00557,HG00559,HG00565,HG00566,HG00580,HG00581,HG00583,HG00584,HG00589,HG00607,HG00608,HG00611,HG00614,HG00620,HG00625,HG00628,HG00634,HG00635,HG00637,HG00638,HG00640,HG00641,HG00650,HG00654,HG00656,HG00657,HG00662,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00699,HG00704,HG00705,HG00707,HG00708,HG00731,HG00732,HG00734,HG00736,HG00737,HG00739,HG00740,HG01047,HG01048,HG01051,HG01052,HG01055,HG01060,HG01061,HG01066,HG01067,HG01069,HG01070,HG01072,HG01073,HG01075,HG01080,HG01082,HG01095,HG01097,HG01098,HG01101,HG01102,HG01124,HG01125,HG01133,HG01136,HG01137,HG01167,HG01168,HG01170,HG01171,HG01173,HG01174,HG01176,HG01177,HG01183,HG01187,HG01188,HG01190,HG01191,HG01197,HG01198,HG01204,HG01251,HG01334,HG01342,HG01350,HG01351,HG01354,HG01359,HG01365,HG01366,HG01374,HG01375,HG01377,HG01378,HG01383,HG01389,HG01390,HG01437,HG01440,HG01441,HG01455,HG01456,HG01461,HG01462,HG01488,HG01489,HG01492,HG01497,HG01515,HG01516,HG01518,HG01519,HG01521,HG01522,NA06984,NA06985,NA06986,NA06989,NA07000,NA07037,NA07048,NA07051,NA07056,NA07346,NA07347,NA07357,NA10847,NA10851,NA11829,NA11830,NA11831,NA11832,NA11843,NA11881,NA11892,NA11893,NA11894,NA11919,NA11920,NA11930,NA11931,NA11932,NA11933,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12006,NA12043,NA12044,NA12045,NA12046,NA12058,NA12144,NA12154,NA12155,NA12156,NA12234,NA12249,NA12272,NA12273,NA12275,NA12282,NA12283,NA12286,NA12287,NA12340,NA12341,NA12342,NA12347,NA12383,NA12399,NA12400,NA12413,NA12489,NA12546,NA12716,NA12717,NA12718,NA12748,NA12749,NA12750,NA12751,NA12761,NA12775,NA12776,NA12777,NA12778,NA12813,NA12827,NA12828,NA12829,NA12830,NA12842,NA12843,NA12878,NA12889,NA12890,NA12891,NA12892,NA18486,NA18487,NA18488,NA18489,NA18498,NA18499,NA18501,NA18505,NA18507,NA18508,NA18511,NA18517,NA18519,NA18520,NA18522,NA18523,NA18526,NA18530,NA18532,NA18533,NA18537,NA18542,NA18545,NA18546,NA18547,NA18548,NA18549,NA18552,NA18555,NA18559,NA18561,NA18562,NA18563,NA18564,NA18565,NA18566,NA18567,NA18571,NA18573,NA18574,NA18576,NA18577,NA18579,NA18582,NA18596,NA18599,NA18602,NA18605,NA18608,NA18610,NA18611,NA18612,NA18620,NA18622,NA18623,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18638,NA18856,NA18858,NA18861,NA18870,NA18873,NA18874,NA18908,NA18909,NA18916,NA18941,NA18942,NA18944,NA18947,NA18950,NA18952,NA18956,NA18960,NA18963,NA18967,NA18983,NA18984,NA18986,NA18988,NA18990,NA18991,NA18999,NA19007,NA19054,NA19058,NA19059,NA19065,NA19078,NA19079,NA19087,NA19088,NA19092,NA19102,NA19107,NA19114,NA19119,NA19198,NA19223,NA19225,NA19235,NA19238,NA19240,NA19257,NA19311,NA19316,NA19319,NA19327,NA19328,NA19332,NA19346,NA19347,NA19359,NA19360,NA19371,NA19372,NA19373,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19384,NA19390,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19430,NA19431,NA19436,NA19438,NA19443,NA19445,NA19453,NA19463,NA19472,NA19625,NA19648,NA19651,NA19652,NA19654,NA19655,NA19657,NA19658,NA19661,NA19663,NA19675,NA19676,NA19679,NA19681,NA19682,NA19684,NA19700,NA19707,NA19713,NA19716,NA19717,NA19719,NA19720,NA19723,NA19725,NA19726,NA19728,NA19729,NA19732,NA19747,NA19749,NA19750,NA19755,NA19759,NA19761,NA19762,NA19770,NA19771,NA19774,NA19776,NA19779,NA19780,NA19782,NA19783,NA19785,NA19786,NA19788,NA19789,NA19818,NA19834,NA19900,NA19904,NA19908,NA19914,NA19920,NA19921,NA20126,NA20278,NA20299,NA20332,NA20336,NA20346,NA20356,NA20502,NA20503,NA20504,NA20506,NA20507,NA20513,NA20514,NA20515,NA20516,NA20517,NA20518,NA20522,NA20524,NA20525,NA20527,NA20528,NA20529,NA20530,NA20531,NA20533,NA20534,NA20536,NA20537,NA20538,NA20539,NA20540,NA20541,NA20542,NA20543,NA20544,NA20581,NA20582,NA20585,NA20586,NA20588,NA20752,NA20755,NA20756,NA20757,NA20758,NA20759,NA20760,NA20761,NA20765,NA20766,NA20768,NA20769,NA20770,NA20772,NA20773,NA20774,NA20775,NA20778,NA20783,NA20785,NA20786,NA20787,NA20795,NA20796,NA20799,NA20800,NA20801,NA20802,NA20803,NA20804,NA20805,NA20806,NA20807,NA20808,NA20809,NA20811,NA20812,NA20813,NA20814,NA20816,NA20826,NA20828 esv2853458 1 11682893 11683189 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123025 M 1 0 1 "" HuRef dgv37n106 1 11682893 11683193 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1111843,nsv1126187,nsv1134962 M 2 0 2 "" KWS1,KWS2 nsv955438 1 11682908 11683165 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000432 M 1 0 1 "" BILGI_BIOE nsv832758 1 11697083 11837144 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442774 M 95 0 1 AGTRAP,DRAXIN,FBXO2,FBXO44,FBXO6,MAD2L2 nsv515826 1 11710561 11713563 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv664907,nssv674188,nssv666865,nssv655395,nssv673329,nssv682277,nssv660113,nssv682473,nssv685412,nssv681520,nssv679392,nssv683681,nssv693798 M 2026 0 13 FBXO2 nsv545417 1 11710561 11721616 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709936 M 17421 0 1 FBXO2,FBXO44 nsv1075569 1 11713299 11715700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3763456 M 1 0 1 FBXO2,FBXO44 KWP1 nsv521468 1 11713563 11717300 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694449 M 2026 0 1 FBXO2,FBXO44 nsv1112519 1 11714500 11715300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966619 M 2 0 1 FBXO2,FBXO44 KWS2 esv3545677 1 11716339 11716396 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9744424 M 767 0 1 FBXO44 esv3585225 1 11725309 11726488 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9855548,essv9855547,essv9855546,essv9855550,essv9855549 M 2504 0 5 FBXO6 NA19307,NA19321,NA19440,NA19443,NA19466 nsv1076104 1 11751499 11752000 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766681 M 1 0 1 DRAXIN,MAD2L2 KWP1 nsv508880 1 11781440 11831320 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619769 M 4 1 0 AGTRAP NA10860 nsv1129458 1 11790384 11790448 CNV tandem duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3962912 M 2 0 0 "" KWS1 nsv545418 1 11803286 11809526 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709937 M 17421 0 1 AGTRAP nsv545419 1 11807615 11811273 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709938 M 17421 1 0 AGTRAP nsv545420 1 11807970 11811283 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709939 M 17421 0 1 AGTRAP nsv545421 1 11808706 11810674 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709940 M 17421 0 1 AGTRAP dgv108n54 1 11809415 11811273 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545422,nsv545423 M 17421 0 2 AGTRAP nsv518652 1 11857711 11862778 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696101 M 2026 0 1 MTHFR esv2280942 1 11889565 11889886 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4641147 M 1 0 1 CLCN6 NA18507 nsv527521 1 11900825 11909514 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703975 M 2026 0 1 CLCN6,NPPA,NPPA-AS1 nsv517385 1 11928830 11928895 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv653897,nssv669294,nssv681416,nssv656721,nssv652751,nssv673526,nssv690321 M 2026 0 7 "" esv3545899 1 11956895 11958001 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9744646 M 767 0 1 "" esv3585227 1 11988599 11993367 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9855887,essv9855886,essv9855885,essv9855884,essv9855883,essv9855882,essv9855881,essv9855917,essv9855900,essv9855891,essv9855890,essv9855889,essv9855888,essv9855899,essv9855894,essv9855893,essv9855892,essv9855898,essv9855895,essv9855897,essv9855896,essv9855902,essv9855916,essv9855907,essv9855901,essv9855906,essv9855903,essv9855905,essv9855904,essv9855910,essv9855915,essv9855909,essv9855908,essv9855911,essv9855914,essv9855913,essv9855912,essv9855919,essv9855918,essv9855922,essv9855921,essv9855920 M 2504 0 42 "" HG00180,HG00320,HG00329,HG00419,HG00560,HG00565,HG00590,HG00662,HG00683,HG00759,HG01806,HG01813,HG01866,HG01872,HG02023,HG02050,HG02140,HG02187,HG02389,HG02455,HG02597,HG02601,HG02731,HG03785,HG04054,HG04176,HG04229,NA12414,NA18559,NA18582,NA18593,NA18620,NA18636,NA18948,NA18952,NA18990,NA18994,NA19072,NA19076,NA19082,NA19090,NA20878 esv2743763 1 11988639 11993412 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961545,essv6847005,essv6967920,essv6733477,essv6946487,essv6892315,essv6722000,essv6917415 M 96 0 8 "" SSM017,SSM024,SSM027,SSM028,SSM045,SSM049,SSM086,SSM098 esv2670693 1 11988649 11993407 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6013996,essv6390169,essv5550755,essv6450182,essv5841944,essv6158937,essv5802120,essv6262121,essv5492028,essv6321813,essv5743262,essv6354380,essv5557663,essv6591077,essv5867042,essv5416173,essv5708107 M 1151 0 17 "" HG00180,HG00320,HG00329,HG00419,HG00560,HG00590,HG00662,HG00683,NA18559,NA18582,NA18593,NA18620,NA18636,NA18948,NA18990,NA19076,NA19082 nsv828475 1 11989622 11993278 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423944 M 31 0 1 "" NA18582 esv2674148 1 11989845 11995642 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6287791,essv5726229,essv6516434,essv5579580,essv6134973,essv5396538,essv6300775,essv5548935,essv6229766,essv5975255,essv6255764,essv5652110,essv5970262,essv6062700 M 1151 0 14 PLOD1 HG00180,HG00181,HG00274,HG00277,HG00284,HG00309,HG00320,HG00326,HG00329,HG00339,HG00342,HG00343,HG00344,HG00346 esv22435 1 11989868 11993484 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16673 M 40 0 1 "" NA12414 dgv109n54 1 11990767 11993126 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545425,nsv545424,nsv545426 M 17421 0 4 "" esv2743774 1 11996690 11997138 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954735,essv6801612 M 96 0 2 PLOD1 SSM026,SSM073 nsv545427 1 12020412 12026355 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709947 M 17421 0 1 PLOD1 nsv955252 1 12023101 12026300 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001800 M 1 0 1 PLOD1 BILGI_BIOE dgv110n54 1 12026355 12031482 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545428,nsv545429 M 17421 0 2 PLOD1 nsv545430 1 12030447 12031482 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709950 M 17421 1 0 PLOD1 dgv111n54 1 12030759 12031482 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545431,nsv545432 M 17421 0 3 PLOD1 esv27905 1 12030771 12031509 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17941 M 40 1 0 PLOD1 NA12156 nsv1126178 1 12030800 12031400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984407 M 2 0 1 PLOD1 KWS1 nsv545433 1 12030861 12031482 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709961,nssv709960,nssv709959,nssv709955,nssv709954,nssv709956,nssv709958,nssv709957 M 17421 8 0 PLOD1 nsv1075165 1 12030899 12031400 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772914 M 1 0 1 PLOD1 KWP1 nsv545434 1 12030913 12031482 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709996,nssv709962,nssv709964,nssv709963,nssv709995,nssv709966,nssv709970,nssv709965,nssv709969,nssv709968,nssv709967,nssv709971,nssv709979,nssv709972,nssv709978,nssv709973,nssv709974,nssv709977,nssv709976,nssv709975,nssv709981,nssv709980,nssv709983,nssv709982,nssv709985,nssv709984,nssv709988,nssv709987,nssv709986,nssv709994,nssv709991,nssv709992,nssv709990,nssv709989,nssv709993,nssv709997,nssv710003,nssv709998,nssv710002,nssv710000,nssv709999,nssv710001,nssv710005,nssv710009,nssv710004,nssv710006,nssv710008,nssv710007,nssv710011,nssv710010 M 17421 46 4 PLOD1 nsv545435 1 12030913 12032030 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710013,nssv710012,nssv710014 M 17421 3 0 PLOD1 nsv470693 1 12050634 12115691 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547698 M 443 0 1 MFN2,MIIP,MIR6729 HGDP00556 nsv945771 1 12052524 12054252 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753019,nssv1753034,nssv1753047,nssv1752977,nssv1753016,nssv1752956,nssv1753025,nssv1752958,nssv1753006,nssv1752969,nssv1753046,nssv1752973,nssv1753021,nssv1752974,nssv1752996,nssv1752984,nssv1753011,nssv1753041,nssv1753001,nssv1752962,nssv1753049,nssv1753036,nssv1753017,nssv1752971,nssv1752999,nssv1752975,nssv1752993,nssv1753037,nssv1753013,nssv1752957,nssv1752986,nssv1753042,nssv1753022,nssv1752987,nssv1753009,nssv1753035,nssv1752955,nssv1752968,nssv1753051,nssv1752961,nssv1752990,nssv1752965,nssv1752997,nssv1752976,nssv1753005,nssv1753039,nssv1753000,nssv1753043,nssv1753045,nssv1752985,nssv1753048,nssv1752970,nssv1753032,nssv1753038,nssv1753008,nssv1752980,nssv1753044,nssv1752978,nssv1753027,nssv1752960,nssv1752998,nssv1752972,nssv1753018,nssv1752963,nssv1753026,nssv1752959,nssv1753028,nssv1752967,nssv1753010,nssv1752966,nssv1753007,nssv1753040,nssv1752994,nssv1752991,nssv1753015,nssv1753004,nssv1753020,nssv1753024,nssv1753033,nssv1753052,nssv1753031,nssv1753053,nssv1752992,nssv1752983,nssv1753030,nssv1752981,nssv1753023,nssv1752982,nssv1752988,nssv1752979,nssv1752989,nssv1753050,nssv1753029,nssv1753014,nssv1753012,nssv1753002,nssv1753003 M 97 10 0 MFN2 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2743785 1 12052987 12053386 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6747770,essv6813163,essv6961546,essv6847006,essv6843879,essv6950174,essv6839964,essv6773435,essv6733478,essv6722001,essv6917416,essv6946488 M 96 0 12 MFN2 SSM004,SSM017,SSM024,SSM027,SSM045,SSM049,SSM056,SSM066,SSM077,SSM084,SSM085,SSM086 esv2672640 1 12053102 12053417 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6410934,essv5701547,essv6422375,essv5940314,essv6176209,essv5633702,essv6269652,essv5881455,essv6513676,essv5482363,essv6366586,essv5457787,essv6375486,essv5411662,essv5711658,essv5634866,essv5770172,essv5402476 M 1151 0 18 MFN2 HG00419,HG00443,HG00589,HG00590,HG00662,HG00683,HG00690,NA18530,NA18534,NA18536,NA18592,NA18593,NA18597,NA18635,NA18636,NA18948,NA18952,NA18990 nsv1113077 1 12059916 12059971 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967967 M 2 0 1 MFN2 KWS2 esv3361336 1 12066257 12066308 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898628,essv8898627,essv8898629 M 185 3 0 MFN2 NA18592,NA18593,NA18948 esv3304719 1 12066271 12066272 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759312,essv7750861,essv7757876 M 185 3 0 MFN2 NA18592,NA18593,NA18948 esv3546010 1 12077221 12077853 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9744757 M 767 0 1 "" nsv1076110 1 12077222 12077853 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3764032 M 1 0 1 "" KWP1 nsv469830 1 12099726 12259915 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1674860 M 265 0 1 MIR4632,MIR7846,TNFRSF1B,TNFRSF8 esv3585229 1 12109017 12111092 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9855971,essv9855974,essv9855973,essv9855972,essv9855975,essv9855976 M 2504 0 6 "" HG02775,HG02783,HG03943,HG04210,NA20870,NA21119 esv6101 1 12122465 12123010 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28542 M 1 0 0 "" nsv466060 1 12130051 12141461 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541698 M 1557 0 1 TNFRSF8 1780862021_A nsv545436 1 12130051 12141461 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173674 M 17421 0 1 TNFRSF8 1780862021_A esv2662914 1 12131633 12134080 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5536735 M 1151 0 1 TNFRSF8 HG00282 esv3585230 1 12131651 12134047 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9855977 M 2504 0 1 TNFRSF8 HG00282 nsv945772 1 12139593 12141260 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753060,nssv1753151,nssv1753055,nssv1753129,nssv1753075,nssv1753105,nssv1753071,nssv1753080,nssv1753067,nssv1753081,nssv1753056,nssv1753144,nssv1753139,nssv1753092,nssv1753072,nssv1753125,nssv1753137,nssv1753131,nssv1753061,nssv1753120,nssv1753073,nssv1753107,nssv1753133,nssv1753128,nssv1753135,nssv1753123,nssv1753141,nssv1753101,nssv1753136,nssv1753104,nssv1753132,nssv1753112,nssv1753082,nssv1753086,nssv1753064,nssv1753098,nssv1753069,nssv1753145,nssv1753057,nssv1753114,nssv1753134,nssv1753118,nssv1753063,nssv1753099,nssv1753083,nssv1753148,nssv1753068,nssv1753117,nssv1753140,nssv1753143,nssv1753059,nssv1753147,nssv1753076,nssv1753115,nssv1753078,nssv1753077,nssv1753074,nssv1753149,nssv1753070,nssv1753127,nssv1753066,nssv1753087,nssv1753085,nssv1753119,nssv1753062,nssv1753130,nssv1753058,nssv1753106,nssv1753065,nssv1753084,nssv1753138,nssv1753054,nssv1753111,nssv1753097,nssv1753093,nssv1753109,nssv1753088,nssv1753091,nssv1753146,nssv1753110,nssv1753142,nssv1753079,nssv1753094,nssv1753122,nssv1753124,nssv1753108,nssv1753102,nssv1753113,nssv1753095,nssv1753150,nssv1753100,nssv1753103,nssv1753116,nssv1753090,nssv1753126,nssv1753089,nssv1753121 M 97 10 0 TNFRSF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv525898 1 12141461 12168523 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702102 M 2026 0 1 TNFRSF8 esv3350116 1 12143034 12143045 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863676 M 185 1 0 TNFRSF8 NA12005 esv1290308 1 12150193 12150291 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4317882 M 2 0 1 TNFRSF8 HuRef nsv508891 1 12157977 12295102 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619770 M 4 1 0 MIR4632,MIR7846,TNFRSF1B,TNFRSF8,VPS13D NA10860 esv3585231 1 12165800 12168667 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9855978 M 2504 0 1 TNFRSF8 HG00136 esv2670946 1 12165895 12168936 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6516150 M 1151 0 1 TNFRSF8 HG00136 esv2743796 1 12177282 12178389 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6747771 M 96 0 1 TNFRSF8 SSM056 nsv476183 1 12181310 12181310 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013757 M 9 1 0 TNFRSF8 NA12878 nsv1133810 1 12182513 12182575 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969381 M 2 0 1 TNFRSF8 KWS2 esv3584475 1 12194451 12277664 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838752 M 34 1 0 MIR4632,MIR7846,TNFRSF1B,TNFRSF8 2RB nsv945773 1 12196188 12197498 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753155,nssv1753175,nssv1754159,nssv1754139,nssv1754163,nssv1754165,nssv1754156,nssv1754144,nssv1753153,nssv1754141,nssv1753173,nssv1754123,nssv1753161,nssv1754172,nssv1753164,nssv1754119,nssv1753169,nssv1754113,nssv1753165,nssv1754128,nssv1753170,nssv1754135,nssv1753180,nssv1754131,nssv1753159,nssv1753177,nssv1754154,nssv1754151,nssv1753171,nssv1754125,nssv1754155,nssv1754132,nssv1754161,nssv1754153,nssv1754157,nssv1754173,nssv1754162,nssv1754137,nssv1753158,nssv1754120,nssv1753181,nssv1754116,nssv1753167,nssv1754112,nssv1754160,nssv1754166,nssv1753154,nssv1754150,nssv1753166,nssv1754142,nssv1753157,nssv1754115,nssv1753176,nssv1753179,nssv1753174,nssv1754110,nssv1753163,nssv1754138,nssv1753168,nssv1754114,nssv1753172,nssv1753178,nssv1753183,nssv1754149,nssv1753162,nssv1754127,nssv1754158,nssv1754167,nssv1753160,nssv1754129,nssv1753156,nssv1754152,nssv1754130,nssv1754117,nssv1754133,nssv1754136,nssv1754143,nssv1754118,nssv1754124,nssv1754145,nssv1754109,nssv1754140,nssv1754169,nssv1754134,nssv1754147,nssv1754171,nssv1754168,nssv1754146,nssv1754170,nssv1754122,nssv1753182,nssv1754126,nssv1753152,nssv1754164,nssv1754108,nssv1754111,nssv1754148 M 97 10 0 TNFRSF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3439333 1 12199006 12199006 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824952 M 185 1 0 TNFRSF8 NA19240 nsv820293 1 12203578 12203762 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419048 M 2 0 1 TNFRSF8 AK1 nsv1144353 1 12214576 12214629 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995104 M 2 0 1 "" KWS1 nsv471622 1 12215264 12431643 CNV gain+loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550330,nssv550337,nssv550318,nssv550323,nssv550321,nssv550328,nssv550341,nssv550335,nssv550339,nssv550319,nssv550324,nssv550343,nssv550338,nssv550320,nssv550331,nssv550325,nssv550334,nssv550342,nssv550340,nssv550326,nssv550332,nssv550329,nssv550333,nssv550327,nssv550322,nssv550336 M 48 1 25 MIR4632,MIR7846,TNFRSF1B,VPS13D NA10492,NA10494,NA10967,NA10969,NA10970,NA10971,NA10976,NA10979,NA11776,NA15724,NA15725,NA15726,NA15727,NA15728,NA15730,NA15732,NA15733,NA16688,NA17014,NA17015,NA17017,NA17020,NA17051,NA17052,NA17059,P86GA nsv527024 1 12224239 12267265 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703399 M 2026 0 1 MIR4632,MIR7846,TNFRSF1B nsv545437 1 12240824 12244258 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710015 M 17421 0 1 TNFRSF1B dgv112n54 1 12242759 12246175 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545439,nsv545438 M 17421 0 4 TNFRSF1B nsv1145321 1 12243677 12243737 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3982415 M 2 0 1 TNFRSF1B KWS1 dgv113n54 1 12244258 12249020 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545440,nsv545441 M 17421 0 2 TNFRSF1B esv275384 1 12354307 12357076 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585374 M 1250 0 1 VPS13D nsv517848 1 12373748 12642243 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695253 M 2026 1 0 DHRS3,MIR6730,SNORA59A,SNORA59B,VPS13D nsv2743 1 12392606 12437500 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7522 M 9 0 1 VPS13D NA12156 esv2743809 1 12447325 12447896 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6735973 M 96 0 1 VPS13D SSM050 nsv1122298 1 12459695 12459749 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969749 M 2 0 1 VPS13D KWS2 nsv2854 1 12470692 12516109 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6975 M 9 0 1 VPS13D NA12156 esv2667673 1 12485247 12489589 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6421919 M 1151 0 1 VPS13D HG00232 esv3585233 1 12485343 12489556 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9856104 M 2504 0 1 VPS13D HG00232 nsv528439 1 12502427 12506960 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705034 M 2026 0 1 VPS13D nsv817617 1 12508943 12533468 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417810 M 112 0 1 VPS13D NA18853 nsv1124560 1 12550600 12553100 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976614 M 2 1 0 VPS13D KWS2 esv3546344 1 12584848 12584968 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9745091 M 767 0 1 "" esv2758922 1 12599168 13877055 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757724,esv2756835 M 270 34 25 AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,HNRNPCP5,LOC649330,LRRC38,MIR6730,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA07000,NA07345,NA07348,NA10831,NA10838,NA10847,NA10851,NA10854,NA10857,NA12004,NA12044,NA12057,NA12239,NA12249,NA12717,NA12752,NA12753,NA12761,NA12762,NA12763,NA12873,NA12874,NA18515,NA18532,NA18552,NA18593,NA18609,NA18611,NA18622,NA18624,NA18861,NA18863,NA18949,NA18951,NA18953,NA18961,NA18965,NA18967,NA18969,NA18970,NA18981,NA18990,NA18991,NA18995,NA18997,NA19007,NA19092,NA19094,NA19103,NA19119,NA19120,NA19127,NA19129,NA19154,NA19159,NA19161,NA19171,NA19173 nsv521737 1 12599422 12684837 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694501 M 2026 0 1 DHRS3,MIR6730 nsv466172 1 12625101 12670396 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541787 M 1557 0 1 DHRS3,MIR6730 NINDS_71 nsv545442 1 12625101 12670396 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173675 M 17421 0 1 DHRS3,MIR6730 NINDS_71 nsv466283 1 12625101 12684837 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541870 M 1557 1 0 DHRS3,MIR6730 HGDP00259 nsv545443 1 12625101 12684837 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173676 M 17421 1 0 DHRS3,MIR6730 HGDP00259 esv3310510 1 12625610 12625621 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843569 M 185 1 0 "" NA19240 esv3379200 1 12625611 12625621 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740934 M 185 1 0 "" NA19240 nsv1126179 1 12655300 12655900 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3984408 M 2 0 1 DHRS3 KWS1 nsv955253 1 12655401 12656200 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001811 M 1 0 1 DHRS3 BILGI_BIOE nsv1011540 1 12661635 12892297 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3472793 M 29084 0 1 AADACL3,AADACL4,C1orf158,DHRS3,PRAMEF1,PRAMEF11,PRAMEF12 nsv475178 1 12665400 12665400 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011930 M 9 1 0 DHRS3 NA19240 nsv475134 1 12665456 12665456 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019533 M 9 1 0 DHRS3 NA19240 nsv428410 1 12674391 13795127 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv454165,nssv454176,nssv453130,nssv454232,nssv454243,nssv454154,nssv454221 M 62 6 1 AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 HGDP00450,HGDP00462,HGDP00463,HGDP00473,NA18916,NA19096,NA19189 esv3585236 1 12702989 12712048 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9856121 M 2504 0 1 AADACL4 HG01918 nsv515525 1 12719211 12723184 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv663825,nssv687835,nssv655876,nssv691346 M 2026 0 4 AADACL4 nsv8657 1 12743147 12747960 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv28045,nssv12449 M 31 0 2 "" NA18853,NA19173 esv1936135 1 12743293 12746737 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4851711 M 1 0 1 "" NA18507 esv2667361 1 12743405 12746628 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5606588,essv6413214,essv5539803,essv6424701,essv5909270,essv6292295,essv5788887,essv6067103,essv5655474,essv6225797,essv5714381,essv6335145,essv5683600,essv5973727,essv5817963,essv6597293,essv5519525,essv6457931,essv5955844,essv6144014,essv6295698,essv6114312 M 1151 0 22 "" HG01191,HG01365,NA18522,NA18867,NA18874,NA19102,NA19312,NA19334,NA19346,NA19374,NA19383,NA19443,NA19444,NA19453,NA19468,NA19470,NA19474,NA19818,NA19834,NA19908,NA19920,NA19982 esv3585238 1 12743419 12746634 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9856713,essv9856680,essv9856679,essv9856673,essv9856678,essv9856672,essv9856674,essv9856677,essv9856676,essv9856675,essv9856682,essv9856681,essv9856712,essv9856686,essv9856695,essv9856685,essv9856684,essv9856683,essv9856689,essv9856687,essv9856694,essv9856688,essv9856690,essv9856693,essv9856691,essv9856692,essv9856711,essv9856702,essv9856697,essv9856696,essv9856701,essv9856698,essv9856700,essv9856699,essv9856705,essv9856710,essv9856704,essv9856703,essv9856709,essv9856706,essv9856708,essv9856707,essv9856726,essv9856743,essv9856717,essv9856716,essv9856715,essv9856714,essv9856720,essv9856725,essv9856719,essv9856718,essv9856724,essv9856721,essv9856723,essv9856722,essv9856728,essv9856742,essv9856733,essv9856727,essv9856732,essv9856729,essv9856731,essv9856730,essv9856736,essv9856741,essv9856735,essv9856734,essv9856740,essv9856737,essv9856739,essv9856738,essv9856757,essv9856745,essv9856744,essv9856747,essv9856748,essv9856746,essv9856750,essv9856756,essv9856749,essv9856751,essv9856755,essv9856752,essv9856753,essv9856754,essv9856759,essv9856758 M 2504 0 88 "" HG01058,HG01191,HG01241,HG01365,HG01396,HG01880,HG01894,HG01956,HG02307,HG02322,HG02334,HG02464,HG02554,HG02561,HG02574,HG02583,HG02585,HG02589,HG02614,HG02629,HG02722,HG02814,HG02852,HG02923,HG02970,HG02971,HG02977,HG03027,HG03057,HG03109,HG03118,HG03139,HG03166,HG03199,HG03280,HG03298,HG03300,HG03352,HG03370,HG03436,HG03437,HG03451,HG03455,HG03499,HG03511,HG03538,NA18488,NA18489,NA18498,NA18507,NA18522,NA18853,NA18867,NA18874,NA18924,NA18933,NA19102,NA19118,NA19171,NA19175,NA19198,NA19207,NA19312,NA19320,NA19321,NA19327,NA19334,NA19346,NA19374,NA19383,NA19391,NA19443,NA19454,NA19468,NA19474,NA19818,NA19834,NA19908,NA19913,NA19920,NA19982,NA20276,NA20287,NA20291,NA20332,NA20342,NA20356,NA20357 esv3302784 1 12746701 12752055 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7737228,essv7733193,essv7734122,essv7732052 M 185 0 0 "" NA18498,NA18507,NA18522,NA18853 nsv545444 1 12747871 12787632 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710022 M 17421 0 1 AADACL3 nsv999658 1 12768962 12859401 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3462862 M 29084 1 0 AADACL3,C1orf158,PRAMEF1,PRAMEF12 nsv466394 1 12774999 12913896 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541946 M 1557 1 0 AADACL3,C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00153 nsv545445 1 12774999 12913896 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173677 M 17421 1 0 AADACL3,C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00153 esv2664000 1 12805272 12807019 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6438790,essv5405133,essv6305105,essv5800624,essv6234108,essv6592404,essv6145854,essv6463242 M 1151 0 8 C1orf158 NA18873,NA18908,NA19189,NA19350,NA19375,NA19393,NA19396,NA19397 esv3585239 1 12805277 12807017 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9856774,essv9856761,essv9856763,essv9856772,essv9856773,essv9856762,essv9856760,essv9856764,essv9856771,essv9856766,essv9856765,essv9856770,essv9856767,essv9856769,essv9856768,essv9856776,essv9856775 M 2504 0 17 C1orf158 HG02585,HG02611,HG02624,HG02896,HG03311,HG03432,HG03437,NA18873,NA18876,NA18908,NA18917,NA19041,NA19189,NA19350,NA19375,NA19393,NA19397 nsv1000876 1 12806772 12845851 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464831 M 29084 1 0 C1orf158,PRAMEF12 dgv19n100 1 12806772 12862325 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1001619,nsv1008869,nsv1005569,nsv1000875 M 29084 0 6 C1orf158,PRAMEF1,PRAMEF12 nsv832869 1 12807473 13019190 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442796,nssv1442785 M 95 1 1 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv470695 1 12820870 12913895 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547699,nssv547702,nssv547703,nssv547700 M 443 0 4 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00694,HGDP00702,HGDP00988,HGDP01366 nsv528703 1 12820870 12913896 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705350 M 2026 0 1 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 esv2743820 1 12822127 12822406 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6868705 M 96 0 1 "" SSM090 esv993047 1 12822300 12822511 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566471 M 3 0 1 "" HuRef esv2743831 1 12822364 12822688 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6950546,essv6913994,essv6906093,essv6710575,essv6832593,essv6797443,essv6877661,essv6941776,essv6933298,essv6682819,essv6813164,essv6961547,essv6824975,essv6843787,essv6847007,essv6821176,essv6679162,essv6937672,essv6883254,essv6793276,essv6807369,essv6718161,essv6885978,essv6836181,essv6714238,essv6780863,essv6675194,essv6686149,essv6839966,essv6929055,essv6773436,essv6917417,essv6816687,essv6972332,essv6810336,essv6889001,essv6769511,essv6853230,essv6921711,essv6804398,essv6895844,essv6668941,essv6898608,essv6750591,essv6784989,essv6828994,essv6946489,essv6874699,essv6925686,essv6876743,essv6801613 M 96 0 51 "" SSM010,SSM011,SSM012,SSM014,SSM016,SSM017,SSM018,SSM019,SSM020,SSM021,SSM022,SSM023,SSM024,SSM025,SSM027,SSM029,SSM031,SSM032,SSM033,SSM034,SSM035,SSM042,SSM043,SSM044,SSM057,SSM065,SSM066,SSM068,SSM069,SSM071,SSM072,SSM073,SSM074,SSM075,SSM076,SSM077,SSM079,SSM080,SSM081,SSM082,SSM083,SSM084,SSM086,SSM087,SSM092,SSM093,SSM095,SSM096,SSM097,SSM099,SSM100 esv2675886 1 12822373 12822586 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5695774,essv6473981,essv5407423,essv6202558,essv6038423,essv6487757,essv5868901,essv6406209,essv5404687,essv6411763,essv5520262,essv6577367,essv5447833,essv6473388,essv5505675,essv6426761,essv6058056,essv6228319,essv5990738,essv6431794,essv5460802,essv6512256,essv5982659,essv6439898,essv5905712,essv6443552,essv6063830,essv6263308,essv5515379,essv6196589,essv6069904,essv6529726,essv5772282,essv6510417,essv5665550,essv6299423,essv5426264,essv6301739,essv6090606,essv6302626,essv5520232,essv6491360,essv6166356,essv6537233,essv5904803,essv6283018,essv5926872,essv6177278,essv5650813,essv6226831,essv5419861,essv6230668,essv5603470,essv6208122,essv5541821,essv6592665,essv5659603,essv6274035,essv6139444,essv6246470,essv5446171,essv6336754,essv5510998,essv6235165,essv5758328,essv6570101,essv5722681,essv6345954,essv6126527,essv6262370,essv5677335,essv6266973,essv6052039,essv6515769,essv5562366,essv6465758,essv5935437,essv6355760,essv6024529,essv6181449,essv5602383,essv6361226,essv5826368,essv6366537,essv5736340,essv6366982,essv6016153,essv6219639,essv5677209,essv6287930,essv5803131,essv6590468,essv6010476,essv6219703,essv5879992,essv6378144,essv6120765,essv6491282,essv5578382,essv5918135,essv5799357,essv6167736,essv5615211,essv5452155,essv6096701,essv5433406,essv6058967,essv6005544,essv6088444,essv5765233,essv5457382,essv5620807,essv5621926,essv5403596,essv5652947,essv6107192,essv5894417,essv5482600,essv6003184,essv5532515,essv5651837,essv5495259,essv5871774,essv5562384 M 1151 0 124 "" HG00123,HG00125,HG00131,HG00136,HG00139,HG00140,HG00154,HG00185,HG00237,HG00249,HG00252,HG00254,HG00256,HG00257,HG00258,HG00268,HG00271,HG00276,HG00277,HG00278,HG00282,HG00284,HG00285,HG00310,HG00313,HG00315,HG00318,HG00320,HG00324,HG00325,HG00326,HG00327,HG00330,HG00336,HG00337,HG00342,HG00346,HG00418,HG00419,HG00421,HG00422,HG00428,HG00436,HG00437,HG00442,HG00448,HG00463,HG00472,HG00475,HG00476,HG00500,HG00512,HG00513,HG00524,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00584,HG00590,HG00607,HG00613,HG00614,HG00650,HG00651,HG00663,HG00671,HG00672,HG00689,HG00690,HG00693,HG00701,HG00702,HG00704,HG00705,HG00708,HG01052,HG01055,HG01060,HG01069,HG01070,HG01073,HG01075,HG01082,HG01102,HG01108,HG01170,HG01334,HG01354,HG01365,HG01366,HG01375,HG01389,NA12829,NA18530,NA18534,NA18536,NA18543,NA18544,NA18546,NA18548,NA18557,NA18559,NA18595,NA18596,NA18597,NA18602,NA18606,NA18610,NA18613,NA18623,NA18632,NA18633,NA18635,NA18636,NA18637,NA19076,NA19390,NA19393,NA19452,NA19663,NA19819 dgv114n54 1 12824223 12912088 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545448,nsv545446 M 17421 2 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1798860570_A dgv6n111 1 12831481 12983506 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nsv1160957,nsv1160980,nsv1161103 M 369 3 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF7,PRAMEF8 nsv998321 1 12831481 13159071 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3478915 M 29084 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 dgv115n54 1 12834253 12883131 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545447,nsv545453 M 17421 0 3 PRAMEF1,PRAMEF12 dgv5n27 1 12834253 12913896 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466505,nsv466727 M 1557 2 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1798860570_A,HGDP00007 dgv116n54 1 12834253 12918674 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545451,nsv545450,nsv545454,nsv545449 M 17421 0 5 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 HGDP00952,HGDP00988 dgv20n100 1 12834568 12918079 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000550,nsv1008631,nsv1009348,nsv1001595,nsv1014734,nsv1004963,nsv1007497,nsv1014276 M 29084 0 16 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 nsv945774 1 12834916 12961351 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754194,nssv1754249,nssv1754257,nssv1754224,nssv1754261,nssv1754211,nssv1754254,nssv1754262,nssv1754198,nssv1754220,nssv1754195,nssv1754206,nssv1754175,nssv1754174,nssv1754202,nssv1754263,nssv1754259,nssv1754204,nssv1754260,nssv1754219,nssv1754191,nssv1754270,nssv1754179,nssv1754242,nssv1754188,nssv1754246,nssv1754203,nssv1754201,nssv1754178,nssv1754239,nssv1754193,nssv1754200,nssv1754176,nssv1754233,nssv1754186,nssv1754209,nssv1754180,nssv1754226,nssv1754190,nssv1754237,nssv1754181,nssv1754264,nssv1754185,nssv1754271,nssv1754192,nssv1754235,nssv1754255,nssv1754268,nssv1754177,nssv1754217,nssv1754196,nssv1754214,nssv1754187,nssv1754199,nssv1754189,nssv1754243,nssv1754258,nssv1754228,nssv1754182,nssv1754251,nssv1754256,nssv1754227,nssv1754253,nssv1754229,nssv1754184,nssv1754240,nssv1754183,nssv1754215,nssv1754205,nssv1754197,nssv1754252,nssv1754212,nssv1754210,nssv1754236,nssv1754234,nssv1754247,nssv1754248,nssv1754241,nssv1754223,nssv1754218,nssv1754231,nssv1754267,nssv1754208,nssv1754245,nssv1754230,nssv1754225,nssv1754250,nssv1754269,nssv1754265,nssv1754232,nssv1754244,nssv1754207,nssv1754266,nssv1754238,nssv1754216,nssv1754213,nssv1754221 M 97 10 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv6n27 1 12835868 12913896 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466838,nsv466949,nsv466616 M 1557 0 3 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1780862077_A,HGDP00952,HGDP01366 dgv117n54 1 12835868 12918674 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545456,nsv545452 M 17421 3 4 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 1780862077_A,HGDP00007,HGDP01366 dgv21n100 1 12835868 13015495 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997632,nsv1000920,nsv998681,nsv1002288,nsv998530,nsv1011809,nsv1006654,nsv1010745,nsv1006273 M 29084 0 72 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv517190 1 12835868 13775830 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv691789,nssv655298,nssv681352,nssv659765,nssv656069,nssv669367,nssv660725,nssv683316,nssv659030,nssv705370,nssv690145,nssv688922,nssv675460,nssv672363,nssv676136,nssv666273,nssv689950,nssv662340,nssv687685,nssv680385,nssv659477,nssv670277,nssv674582,nssv658961,nssv664702,nssv678613,nssv668984,nssv688036,nssv685626,nssv664467,nssv663875,nssv669316,nssv674765,nssv678527,nssv661007,nssv680870,nssv658370,nssv658040,nssv681241,nssv676168,nssv665485,nssv677586,nssv672026,nssv671841,nssv688196,nssv692088,nssv674814,nssv680445,nssv690595,nssv653971,nssv683850,nssv702090,nssv675328,nssv655162,nssv652446,nssv655601,nssv668625,nssv681069,nssv687277,nssv658218,nssv670769,nssv680570,nssv660425,nssv684041,nssv660049,nssv651901,nssv654351,nssv685508,nssv663203,nssv678933,nssv688182,nssv662290,nssv680419,nssv652682,nssv654248,nssv688711,nssv652055,nssv659462,nssv692526,nssv670301,nssv664297,nssv676530,nssv677999,nssv662916,nssv676529,nssv684928,nssv687198,nssv675204,nssv682789,nssv662505,nssv660265 M 2026 21 70 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 dgv22n100 1 12836442 13471933 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014205,nsv1007272,nsv1009800,nsv1000597,nsv1000037,nsv1011355,nsv998433,nsv1007258,nsv997273,nsv1004545,nsv1007972,nsv1005952 M 29084 13 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 dgv23n100 1 12837840 12883084 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005803,nsv1010693,nsv998824,nsv1009173,nsv1006151 M 29084 0 52 PRAMEF1,PRAMEF12 esv2763769 1 12837840 13871942 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6992522,essv6993966,essv6992633,essv6992411,essv6992855,essv6992078,essv6994078,essv6993300,essv7032856,essv6992189,essv7033078,essv6991411,essv6991078,essv6991300,essv7033189,essv6993078,essv7033300,essv6993189,essv6990967,essv6991967,essv6993522,essv6994300,essv6991856,essv6992967,essv6992300,essv7032745,essv6990856,essv6993411,essv6993633,essv6994189,essv6993744,essv6990745,essv7032967,essv6991744,essv6991633,essv6991522,essv6991189,essv6993855,essv6992744 M 1109 6 32 HNRNPCL1,HNRNPCP5,LOC649330,LRRC38,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 SW_0018,SW_0029,SW_0044,SW_0048,SW_0144,SW_0338,SW_0379,SW_0576,SW_0580,SW_0585,SW_0647,SW_0758,SW_0789,SW_0805,SW_0817,SW_0859,SW_0888,SW_0890,SW_0892,SW_1029,SW_1056,SW_1070,SW_1088,SW_1095,SW_1118,SW_1170,SW_1172,SW_1198,SW_1203,SW_1215,SW_1244,SW_1263,SW_1283,SW_1356,SW_1428,SW_1460,SW_1470,SW_1509 dgv24n100 1 12838732 12892297 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998574,nsv1002449 M 29084 0 3 PRAMEF1,PRAMEF11 dgv25n100 1 12838732 13187358 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv997840,nsv1007137,nsv1001463,nsv998901 M 29084 0 5 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 dgv26n100 1 12838732 13471933 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1000469,nsv1005987,nsv1003480,nsv1012212,nsv1008135,nsv999070,nsv1010963,nsv1013182,nsv1014048 M 29084 32 36 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF15,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 esv2764212 1 12838744 13187370 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004974,essv7005004,essv7004996,essv7004997,essv7005001,essv7004986,essv7004981,essv7004983,essv7004976,essv7004993,essv7004972,essv7004995,essv7004971,essv7004988,essv7004982,essv7004994,essv7004990,essv7004992,essv7004964,essv7004973,essv7004963,essv7004977,essv7005003,essv7004962,essv7004991,essv7004987,essv7004965,essv7004999,essv7004980,essv7004961,essv7004969,essv7005002,essv7004985,essv7004998,essv7004970,essv7004984,essv7004979,essv7004968,essv7004975 M 1109 4 32 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 RW_0004,RW_0021,RW_0033,RW_0045,RW_0084,RW_0116,RW_0139,RW_0140,RW_0147,RW_0169,RW_0189,RW_0190,RW_0193,RW_0196,RW_0216,RW_0223,RW_0232,RW_0237,RW_0249,RW_0254,RW_0266,RW_0269,RW_0319,RW_0325,RW_0515,RW_0521,RW_0539,RW_0540,RW_0543,RW_0544,RW_0552,RW_0604,RW_0607,RW_0612,RW_0636 nsv1160970 1 12839576 12862241 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nssv4027989 M 369 0 1 PRAMEF1 dgv7n111 1 12839576 13013117 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nsv1161124,nsv1160996,nsv1161135 M 369 0 3 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv821559 1 12839977 12893065 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1421068 M 1 1 0 PRAMEF1,PRAMEF11 NA10851 dgv13n67 1 12839977 12909555 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv828586,nsv828697 M 31 0 2 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 AK20,NA18969 nsv471539 1 12840259 12865371 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547949,nssv547950,nssv547951 M 3 3 0 PRAMEF1 JDW,NA18507,YH nsv955254 1 12840601 12855700 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001822 M 1 1 0 PRAMEF1 BILGI_BIOE esv28644 1 12840608 13052938 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13103,esv15812,esv19152,esv18407,esv11373,esv13474,esv21420,esv16532,esv16950,esv20242,esv11679,esv12552,esv11323,esv15024,esv18833 M 40 36 11 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv990214 1 12841807 12951075 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586626 M 3 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 HuRef esv3584586 1 12841928 12883096 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9838624 M 34 0 1 PRAMEF1 3LK nsv1161102 1 12841928 12892309 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nssv4028434,nssv4028545,nssv4028983,nssv4028878,nssv4028767,nssv4028656,nssv4028323 M 369 0 7 PRAMEF1,PRAMEF11 esv2421662 1 12841928 12971833 OTHER complex Altshuler_et_al_2010 20811451 SNP array essv5038349,essv5104297,essv5013828,essv5107947,essv5039373,essv5098165,essv5067055,essv5098033,essv5102370,essv5029580,essv5120396,essv5159736,essv5132926,essv5009132,essv5025654,essv5116203,essv5144838,essv5022261,essv5106036,essv5122638,essv5049008,essv5059824,essv5057726,essv5140930,essv5109453,essv5041350,essv5018496,essv5109420,essv5140420,essv5009774,essv5066353,essv5122668,essv5131081,essv5003555,essv5102257,essv5082781,essv5053532,essv5061766,essv5050218,essv5051593,essv5034347,essv5115604,essv5065514,essv5072990,essv5024352,essv5077663,essv5061594,essv5111327,essv5023516,essv5024400,essv5027197,essv5121017,essv5089601,essv5018867,essv5030453,essv5006338,essv5088719,essv5089177,essv5114531,essv5040953,essv5117560,essv5038935,essv5159266,essv5116223,essv5143438,essv5150257,essv5124804,essv5139478,essv5102044,essv5040928,essv5074962,essv5018478,essv5048343,essv5128528,essv5129922,essv5073546,essv5116865,essv5097924,essv5138370,essv5053293,essv5134010,essv5133462,essv5098485,essv5064090,essv5084483,essv5068309,essv5017667,essv5109345,essv5115549,essv5012238 M 1184 20 70 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA10838,NA10847,NA10853,NA11891,NA11918,NA12044,NA12344,NA12375,NA12383,NA12546,NA12718,NA12753,NA12763,NA12874,NA17962,NA17965,NA17974,NA17996,NA18109,NA18135,NA18144,NA18161,NA18555,NA18559,NA18593,NA18611,NA18614,NA18617,NA18622,NA18624,NA18702,NA18863,NA18923,NA18924,NA18925,NA18951,NA18955,NA18963,NA18965,NA18969,NA18981,NA18990,NA18991,NA19066,NA19083,NA19103,NA19236,NA19313,NA19334,NA19390,NA19436,NA19468,NA19681,NA19683,NA19720,NA19721,NA19747,NA19748,NA19770,NA19789,NA19908,NA19914,NA19915,NA19919,NA20337,NA20542,NA20810,NA20818,NA20828,NA20887,NA21088,NA21102,NA21111,NA21119,NA21144,NA21316,NA21317,NA21318,NA21364,NA21367,NA21381,NA21383,NA21414,NA21512,NA21519,NA21596,NA21635,NA21636,NA21740,NA21784 esv3584589 1 12841928 13377047 CNV loss Mokhtar_et_al_2014 24956385 SNP array essv9837920 M 34 0 1 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 KSF005 esv3585240 1 12842004 12846594 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9856777,essv9856778,essv9856780,essv9856779,essv9856781,essv9856783,essv9856782,essv9856784,essv9856785,essv9856787,essv9856786,essv9856893,essv9856828,essv9856788,essv9856795,essv9856794,essv9856793,essv9856792,essv9856789,essv9856791,essv9856790,essv9856796,essv9856801,essv9856827,essv9856810,essv9856800,essv9856797,essv9856799,essv9856798,essv9856809,essv9856804,essv9856803,essv9856802,essv9856808,essv9856805,essv9856807,essv9856806,essv9856812,essv9856817,essv9856811,essv9856826,essv9856813,essv9856816,essv9856815,essv9856814,essv9856820,essv9856825,essv9856819,essv9856818,essv9856821,essv9856824,essv9856823,essv9856822,essv9856842,essv9856833,essv9856832,essv9856829,essv9856831,essv9856859,essv9856892,essv9856830,essv9856836,essv9856841,essv9856835,essv9856834,essv9856840,essv9856837,essv9856839,essv9856838,essv9856858,essv9856849,essv9856844,essv9856843,essv9856848,essv9856845,essv9856847,essv9856846,essv9856852,essv9856857,essv9856851,essv9856850,essv9856856,essv9856853,essv9856855,essv9856854,essv9856874,essv9856860,essv9856865,essv9856891,essv9856864,essv9856861,essv9856863,essv9856862,essv9856866,essv9856873,essv9856868,essv9856867,essv9856869,essv9856872,essv9856871,essv9856870,essv9856881,essv9856876,essv9856890,essv9856875,essv9856880,essv9856877,essv9856879,essv9856878,essv9856884,essv9856889,essv9856882,essv9856883,essv9856885,essv9856888,essv9856887,essv9856886,essv9856894,essv9856906,essv9856923,essv9856905,essv9856897,essv9856900,essv9856896,essv9856895,essv9856899,essv9856898,essv9856901,essv9856904,essv9856903,essv9856902,essv9856908,essv9856913,essv9856922,essv9856907,essv9856909,essv9856912,essv9856911,essv9856910,essv9856916,essv9856921,essv9856915,essv9856914,essv9856920,essv9856917,essv9856919,essv9856918,essv9856929,essv9856926,essv9856924,essv9856925,essv9856928,essv9856927,essv9856930 M 2504 0 154 "" HG00120,HG00140,HG00176,HG00188,HG00250,HG00257,HG00321,HG00331,HG00360,HG00406,HG00442,HG00479,HG00524,HG00559,HG00584,HG00596,HG00632,HG00672,HG00692,HG00693,HG00699,HG01105,HG01183,HG01281,HG01312,HG01351,HG01354,HG01377,HG01383,HG01498,HG01515,HG01537,HG01598,HG01599,HG01600,HG01615,HG01624,HG01676,HG01680,HG01766,HG01776,HG01802,HG01815,HG01845,HG01846,HG01858,HG01863,HG01878,HG01950,HG02017,HG02026,HG02031,HG02069,HG02073,HG02087,HG02156,HG02178,HG02221,HG02252,HG02394,HG02409,HG02449,HG02490,HG02661,HG03007,HG03016,HG03238,HG03616,HG03672,HG03693,HG03711,HG03722,HG03730,HG03738,HG03753,HG03757,HG03771,HG03784,HG03792,HG03812,HG03823,HG03837,HG03858,HG03884,HG03894,HG03902,HG03926,HG03950,HG03951,HG03969,HG04006,HG04019,HG04093,HG04094,HG04161,HG04162,HG04177,HG04186,HG04206,HG04219,HG04235,NA07056,NA12044,NA12347,NA12383,NA12413,NA12546,NA12718,NA12874,NA18555,NA18559,NA18567,NA18582,NA18603,NA18611,NA18624,NA18635,NA18946,NA18947,NA18963,NA18965,NA18969,NA18978,NA18981,NA18983,NA18990,NA18995,NA19000,NA19059,NA19066,NA19076,NA19083,NA19084,NA19087,NA19789,NA19923,NA20542,NA20801,NA20828,NA20853,NA20878,NA20887,NA20890,NA21088,NA21093,NA21102,NA21110,NA21111,NA21115,NA21118,NA21122,NA21129,NA21130,NA21144 nsv1076314 1 12844999 12849400 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3762613 M 1 1 0 "" KWP1 nsv1128587 1 12845000 12855200 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960498 M 2 1 0 PRAMEF1 KWS1 nsv1008195 1 12845851 12867954 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3467162,nssv3697900,nssv3477814,nssv3697899,nssv3480488 M 29084 1 4 PRAMEF1 dgv27n100 1 12845851 12918079 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004265,nsv1007443,nsv1009423,nsv1012040,nsv1005285,nsv1010457,nsv1006973 M 29084 13 111 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 dgv28n100 1 12845851 13015495 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv998447,nsv1000098,nsv1003633,nsv1012081 M 29084 12 73 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 dgv29n100 1 12845851 13159071 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1008555,nsv1013855,nsv1008882 M 29084 5 8 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 dgv30n100 1 12845851 13471692 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1013772,nsv1011289,nsv999517,nsv1002694,nsv1001817,nsv1002325,nsv1009318,nsv1004453,nsv1011638,nsv998870,nsv1000258,nsv1010904,nsv1002421,nsv998466,nsv1013726,nsv1008901 M 29084 0 28 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF15,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 dgv31n100 1 12845851 13717812 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1005187,nsv999913,nsv1006435 M 29084 3 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 nsv442270 1 12845863 12883096 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1618024,nssv1618202,nssv1618135,nssv1618213,nssv1617924,nssv1616614,nssv1618002,nssv1618091,nssv1618257,nssv1617969,nssv1617935,nssv1618246,nssv1618080,nssv1618146,nssv1618013,nssv1616625,nssv1618069,nssv1617991,nssv1618113,nssv1618102,nssv1618124,nssv1617958,nssv1618169,nssv1618058,nssv1618035,nssv1617947,nssv1618235,nssv1618157,nssv1616647,nssv1618224,nssv1617980,nssv1617913,nssv1618180,nssv1618268,nssv1618191,nssv1618046,nssv1616636 M 270 9 28 PRAMEF1 NA07019,NA07056,NA10838,NA10857,NA12004,NA12044,NA12753,NA12763,NA12815,NA12865,NA12874,NA18529,NA18555,NA18582,NA18593,NA18603,NA18611,NA18621,NA18622,NA18624,NA18635,NA18861,NA18863,NA18947,NA18951,NA18965,NA18969,NA18978,NA18981,NA18990,NA18991,NA18995,NA18997,NA19000,NA19092,NA19094,NA19103 nsv8768 1 12846155 13517588 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv26897,nssv12099,nssv28042,nssv29277,nssv28039,nssv12096,nssv12120,nssv28545,nssv29258,nssv11776,nssv28937,nssv28554,nssv11774,nssv28944,nssv28049,nssv28929,nssv28920,nssv12111,nssv28543,nssv28540,nssv11790,nssv11775,nssv11772,nssv29267,nssv28056,nssv13414,nssv11764,nssv12438,nssv12765,nssv28541,nssv12752,nssv26901,nssv28935,nssv28927,nssv28032,nssv12767,nssv28544,nssv28047,nssv29265,nssv26895,nssv29264,nssv28933,nssv29250,nssv29257,nssv12101,nssv28539,nssv13744,nssv12112,nssv12108,nssv29263,nssv24599,nssv29269,nssv13753,nssv28550,nssv28036,nssv29259,nssv29249,nssv29275,nssv26881,nssv26899,nssv12439,nssv26898,nssv28035,nssv29274,nssv14074,nssv13429,nssv28943,nssv26891,nssv11781,nssv12093,nssv28053,nssv28936,nssv28560,nssv26880,nssv28050,nssv28931,nssv14083,nssv14423,nssv12433,nssv12780,nssv11780,nssv28934,nssv28549,nssv12769,nssv14429,nssv12435,nssv21451,nssv13093,nssv28040,nssv24616,nssv12094,nssv11783,nssv11771,nssv28556,nssv24598,nssv13428,nssv28043,nssv29271,nssv28557,nssv26883,nssv12113,nssv28932,nssv11777,nssv28559,nssv28033,nssv12443,nssv14099,nssv12773,nssv29266,nssv28941,nssv28555,nssv29262,nssv13103,nssv12092,nssv12121,nssv28546,nssv28945,nssv28939,nssv28553,nssv29278,nssv28928,nssv28547,nssv11769,nssv13433,nssv12429,nssv29253,nssv11762,nssv12424,nssv12441,nssv12426,nssv28041,nssv13099,nssv13763,nssv28948,nssv13769,nssv24622,nssv21427,nssv28923,nssv14093,nssv12437,nssv13098,nssv26904,nssv12450,nssv12763,nssv11778,nssv28938,nssv14753,nssv12103,nssv26878,nssv15113,nssv11791,nssv26890,nssv11779,nssv11766,nssv12105,nssv12754,nssv28947,nssv29256,nssv12779,nssv12422,nssv13109,nssv13439,nssv12109,nssv29261,nssv11770,nssv28551,nssv11763,nssv13423,nssv11782,nssv28051,nssv13084,nssv12768,nssv28531,nssv28919,nssv12107,nssv29268 M 31 30 19 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 dgv14n67 1 12846734 12920040 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829030,nsv828808 M 31 2 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 AK2,NA18997 esv32750 1 12846944 13142568 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv101326,essv99068,essv97675,essv97209,essv96818,essv98305,essv95436,essv95313,essv93282,essv97562,essv100556,essv94766,essv98419,essv96441,essv94614,essv96954,essv95060,essv100225,essv92784,essv97952,essv93105,essv96187,essv92594,essv101537,essv96690,essv97426,essv100377,essv95661,essv99314,essv99649,essv95999,essv94423,essv92841,essv100986,essv96257,essv95868,essv101177 M 51 37 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 21603,21616,21618,21659,21693,21721,21772,21791,21805,21808,21817,21837,21841,21847,21863,21872,21879,21911,21932,21938,21939,21944,22007,22011,22075,22127,22170,22217,22233,22261,22275,22278,22286,22298,22300,22352,22371 dgv118n54 1 12846998 12887549 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545459,nsv545455 M 17421 2 0 PRAMEF1,PRAMEF11 nsv545457 1 12846998 12953743 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710035 M 17421 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 esv3891192 1 12850542 12922611 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25790751,essv25797277,essv25781694,essv25799286,essv25780439,essv25781141,essv25786662,essv25787908,essv25796240,essv25791015,essv25790643,essv25787366,essv25797430,essv25796353,essv25801663,essv25786482,essv25787494,essv25791041,essv25800091,essv25787832,essv25798427,essv25790776,essv25798459,essv25792802,essv25789100,essv25787995,essv25800334,essv25779746,essv25789560,essv25789138,essv25791057,essv25790602 M 3017 14 18 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 esv3891748 1 12850542 12961019 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25798021,essv25796445,essv25788182,essv25788080 M 3017 2 2 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 nsv1008359 1 12852748 12867825 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3477341 M 29084 1 0 PRAMEF1 nsv1004622 1 12852748 12867954 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3697973,nssv3697974 M 29084 0 2 PRAMEF1 dgv119n54 1 12852748 12887549 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545460,nsv545458 M 17421 0 2 PRAMEF1,PRAMEF11 dgv32n100 1 12852748 12892297 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1003521,nsv1005421,nsv1009315,nsv1010023,nsv1014011 M 29084 0 19 PRAMEF1,PRAMEF11 nsv1006524 1 12852748 12892297 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464724,nssv3466020,nssv3481657,nssv3472344,nssv3471824,nssv3465603,nssv3697978 M 29084 1 6 PRAMEF1,PRAMEF11 dgv33n100 1 12852748 12915847 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1014357,nsv1005021,nsv1010518,nsv1014677,nsv1011031,nsv1009225,nsv1000846,nsv1014153 M 29084 0 32 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 nsv1161105 1 12852872 12909977 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nssv4029064 M 369 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 dgv120n54 1 12852872 12922611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545476,nsv545463,nsv545461,nsv545471,nsv545475 M 17421 0 11 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 nsv1075769 1 12853599 12856200 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3772244 M 1 1 0 PRAMEF1 KWP1 dgv15n67 1 12853692 12898164 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv829141,nsv828919 M 31 0 2 PRAMEF1,PRAMEF11 AK6,NA18951 esv2669351 1 12853865 12919353 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5455860,essv5886964 M 1151 0 2 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 NA19087,NA19197 esv3891525 1 12854842 12866590 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25784405,essv25784285 M 3017 0 2 PRAMEF1 esv3891303 1 12854842 12899109 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25784694,essv25786075,essv25784759,essv25789118,essv25783416,essv25788571,essv25789505,essv25782822,essv25781234,essv25788805,essv25800612,essv25800866 M 3017 4 8 PRAMEF1,PRAMEF11 nsv545462 1 12854842 12912088 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710040 M 17421 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 esv3891414 1 12854842 13051338 CNV gain+loss Suktitipat_et_al_2014 25118596 SNP array essv25797433,essv25797241,essv25792878,essv25797208,essv25788937,essv25796483,essv25796029 M 3017 2 5 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 esv3585241 1 12854895 12919194 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9857023,essv9857022,essv9856956,essv9857021,essv9856938,essv9856955,essv9856932,essv9856937,essv9856931,essv9856933,essv9856936,essv9856935,essv9856934,essv9856940,essv9856945,essv9856939,essv9856954,essv9856944,essv9856941,essv9856942,essv9856943,essv9856948,essv9856953,essv9856947,essv9856946,essv9856949,essv9856952,essv9856951,essv9856950,essv9856970,essv9856961,essv9856987,essv9856960,essv9857020,essv9856959,essv9856958,essv9856957,essv9856969,essv9856964,essv9856963,essv9856962,essv9856965,essv9856968,essv9856967,essv9856966,essv9856986,essv9856971,essv9856977,essv9856972,essv9856976,essv9856973,essv9856975,essv9856974,essv9856980,essv9856978,essv9856979,essv9856985,essv9856981,essv9856984,essv9856982,essv9856983,essv9856988,essv9857019,essv9857002,essv9856993,essv9856992,essv9856989,essv9856991,essv9856990,essv9856994,essv9856996,essv9856995,essv9857001,essv9856997,essv9857000,essv9856998,essv9856999,essv9857004,essv9857018,essv9857009,essv9857003,essv9857008,essv9857005,essv9857007,essv9857006,essv9857012,essv9857017,essv9857011,essv9857010,essv9857013,essv9857016,essv9857015,essv9857014,essv9857078,essv9857045,essv9857028,essv9857027,essv9857026,essv9857024,essv9857025,essv9857030,essv9857044,essv9857035,essv9857029,essv9857034,essv9857031,essv9857033,essv9857032,essv9857038,essv9857036,essv9857043,essv9857037,essv9857042,essv9857039,essv9857041,essv9857040,essv9857051,essv9857060,essv9857077,essv9857047,essv9857046,essv9857050,essv9857049,essv9857048,essv9857054,essv9857059,essv9857053,essv9857052,essv9857058,essv9857055,essv9857057,essv9857056,essv9857062,essv9857076,essv9857067,essv9857061,essv9857066,essv9857063,essv9857065,essv9857064,essv9857070,essv9857075,essv9857069,essv9857068,essv9857074,essv9857071,essv9857073,essv9857072,essv9857083,essv9857079,essv9857082,essv9857081,essv9857080,essv9857086,essv9857091,essv9857085,essv9857084,essv9857090,essv9857087,essv9857089,essv9857088 M 2504 0 161 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 HG00120,HG00140,HG00176,HG00188,HG00257,HG00321,HG00360,HG00442,HG00445,HG00479,HG00524,HG00584,HG00596,HG00623,HG00632,HG00672,HG00692,HG00693,HG01105,HG01174,HG01183,HG01281,HG01312,HG01351,HG01354,HG01377,HG01383,HG01498,HG01515,HG01537,HG01571,HG01599,HG01615,HG01624,HG01676,HG01680,HG01766,HG01776,HG01802,HG01806,HG01815,HG01845,HG01863,HG01878,HG01920,HG01948,HG01950,HG01954,HG01968,HG01971,HG02008,HG02017,HG02026,HG02031,HG02087,HG02146,HG02178,HG02221,HG02252,HG02301,HG02315,HG02394,HG02406,HG02425,HG02449,HG02450,HG02461,HG02464,HG02490,HG02588,HG02651,HG02700,HG02716,HG02772,HG03007,HG03016,HG03099,HG03238,HG03241,HG03470,HG03616,HG03693,HG03711,HG03722,HG03730,HG03755,HG03757,HG03784,HG03792,HG03812,HG03823,HG03837,HG03884,HG03894,HG03902,HG03926,HG03950,HG03951,HG04006,HG04019,HG04093,HG04094,HG04161,HG04162,HG04177,HG04206,HG04219,HG04235,NA07056,NA11920,NA12044,NA12347,NA12383,NA12413,NA12546,NA12718,NA12763,NA12874,NA18555,NA18559,NA18567,NA18593,NA18603,NA18611,NA18624,NA18941,NA18946,NA18963,NA18965,NA18969,NA18981,NA18983,NA18990,NA18991,NA19000,NA19059,NA19066,NA19076,NA19079,NA19083,NA19084,NA19087,NA19331,NA19334,NA19436,NA19789,NA20542,NA20585,NA20828,NA20853,NA20878,NA20887,NA20890,NA21088,NA21093,NA21102,NA21110,NA21111,NA21115,NA21118,NA21144 esv3585242 1 12856327 12893193 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9857222,essv9857221,essv9857220,essv9857219,essv9857198,essv9857197,essv9857195,essv9857196,essv9857194,essv9857193,essv9857192,essv9857202,essv9857216,essv9857218,essv9857206,essv9857215,essv9857231,essv9857217,essv9857205,essv9857201,essv9857264,essv9857200,essv9857204,essv9857199,essv9857203,essv9857212,essv9857209,essv9857214,essv9857230,essv9857211,essv9857208,essv9857207,essv9857210,essv9857213,essv9857229,essv9857224,essv9857223,essv9857228,essv9857225,essv9857227,essv9857226,essv9857246,essv9857237,essv9857233,essv9857232,essv9857236,essv9857235,essv9857234,essv9857263,essv9857240,essv9857245,essv9857239,essv9857238,essv9857241,essv9857244,essv9857243,essv9857242,essv9857248,essv9857253,essv9857247,essv9857262,essv9857249,essv9857252,essv9857251,essv9857250,essv9857261,essv9857256,essv9857255,essv9857254,essv9857257,essv9857260,essv9857259,essv9857258,essv9857295,essv9857278,essv9857269,essv9857268,essv9857265,essv9857267,essv9857266,essv9857272,essv9857277,essv9857271,essv9857270,essv9857276,essv9857273,essv9857275,essv9857274,essv9857280,essv9857285,essv9857279,essv9857294,essv9857284,essv9857281,essv9857283,essv9857282,essv9857288,essv9857293,essv9857287,essv9857286,essv9857289,essv9857292,essv9857291,essv9857290,essv9857301,essv9857310,essv9857300,essv9857297,essv9857296,essv9857299,essv9857298,essv9857304,essv9857309,essv9857303,essv9857302,essv9857308,essv9857305,essv9857307,essv9857306,essv9857312,essv9857317,essv9857311,essv9857316,essv9857313,essv9857315,essv9857314,essv9857320,essv9857319,essv9857318,essv9857321,essv9857323,essv9857322,essv9857191,essv9857190,essv9857189,essv9857188,essv9857187,essv9857186,essv9857185,essv9857184,essv9857183,essv9857143,essv9857092,essv9857109,essv9857142,essv9857099,essv9857094,essv9857108,essv9857093,essv9857098,essv9857095,essv9857097,essv9857096,essv9857102,essv9857107,essv9857101,essv9857100,essv9857103,essv9857106,essv9857105,essv9857104,essv9857124,essv9857115,essv9857110,essv9857141,essv9857114,essv9857111,essv9857113,essv9857112,essv9857118,essv9857123,essv9857117,essv9857116,essv9857119,essv9857122,essv9857121,essv9857120,essv9857131,essv9857126,essv9857140,essv9857125,essv9857130,essv9857127,essv9857129,essv9857128,essv9857134,essv9857139,essv9857132,essv9857133,essv9857135,essv9857138,essv9857137,essv9857136,essv9857182,essv9857171,essv9857154,essv9857181,essv9857145,essv9857144,essv9857148,essv9857153,essv9857147,essv9857146,essv9857152,essv9857149,essv9857151,essv9857150,essv9857156,essv9857170,essv9857161,essv9857155,essv9857160,essv9857157,essv9857159,essv9857158,essv9857169,essv9857164,essv9857163,essv9857162,essv9857165,essv9857168,essv9857167,essv9857166,essv9857180,essv9857179,essv9857174,essv9857173,essv9857172,essv9857178,essv9857176,essv9857175,essv9857177 M 2504 0 232 PRAMEF1,PRAMEF11 HG00120,HG00140,HG00176,HG00188,HG00250,HG00257,HG00321,HG00331,HG00360,HG00406,HG00442,HG00445,HG00479,HG00524,HG00543,HG00559,HG00580,HG00584,HG00596,HG00632,HG00672,HG00684,HG00692,HG00693,HG00699,HG00982,HG01105,HG01174,HG01183,HG01281,HG01312,HG01351,HG01354,HG01377,HG01383,HG01440,HG01443,HG01498,HG01515,HG01537,HG01551,HG01571,HG01596,HG01598,HG01599,HG01600,HG01615,HG01624,HG01676,HG01680,HG01766,HG01776,HG01802,HG01806,HG01815,HG01842,HG01845,HG01846,HG01847,HG01855,HG01858,HG01859,HG01863,HG01868,HG01878,HG01920,HG01948,HG01950,HG01954,HG01968,HG01971,HG02008,HG02017,HG02026,HG02031,HG02069,HG02072,HG02073,HG02087,HG02116,HG02136,HG02146,HG02156,HG02178,HG02221,HG02252,HG02301,HG02315,HG02360,HG02394,HG02406,HG02409,HG02449,HG02450,HG02461,HG02464,HG02490,HG02549,HG02588,HG02651,HG02661,HG02666,HG02700,HG02716,HG02772,HG02855,HG02981,HG03007,HG03016,HG03055,HG03060,HG03099,HG03121,HG03235,HG03238,HG03241,HG03294,HG03376,HG03380,HG03452,HG03470,HG03538,HG03548,HG03616,HG03672,HG03693,HG03711,HG03722,HG03730,HG03738,HG03753,HG03755,HG03757,HG03771,HG03784,HG03792,HG03812,HG03823,HG03837,HG03856,HG03858,HG03884,HG03894,HG03902,HG03926,HG03950,HG03951,HG03969,HG04006,HG04019,HG04093,HG04094,HG04161,HG04162,HG04177,HG04206,HG04219,HG04235,NA07056,NA11920,NA12044,NA12347,NA12383,NA12413,NA12546,NA12718,NA12763,NA12874,NA18555,NA18559,NA18567,NA18582,NA18591,NA18603,NA18606,NA18611,NA18614,NA18621,NA18624,NA18635,NA18645,NA18941,NA18946,NA18947,NA18951,NA18963,NA18965,NA18969,NA18978,NA18981,NA18983,NA18990,NA18991,NA18995,NA19000,NA19059,NA19066,NA19076,NA19079,NA19083,NA19084,NA19087,NA19331,NA19334,NA19681,NA19747,NA19770,NA19786,NA19789,NA19923,NA20274,NA20542,NA20585,NA20801,NA20810,NA20828,NA20852,NA20853,NA20878,NA20887,NA20890,NA21088,NA21093,NA21102,NA21110,NA21111,NA21115,NA21118,NA21122,NA21129,NA21130,NA21144 esv3585243 1 12856327 12893193 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9857329,essv9857328,essv9857327,essv9857326,essv9857325,essv9857324,essv9857333,essv9857358,essv9857391,essv9857332,essv9857331,essv9857330,essv9857341,essv9857336,essv9857335,essv9857334,essv9857339,essv9857340,essv9857338,essv9857337,essv9857343,essv9857357,essv9857348,essv9857342,essv9857347,essv9857344,essv9857346,essv9857345,essv9857351,essv9857356,essv9857350,essv9857349,essv9857352,essv9857355,essv9857354,essv9857353,essv9857364,essv9857359,essv9857373,essv9857390,essv9857363,essv9857360,essv9857362,essv9857361,essv9857367,essv9857372,essv9857366,essv9857365,essv9857371,essv9857368,essv9857370,essv9857369,essv9857389,essv9857380,essv9857375,essv9857374,essv9857379,essv9857376,essv9857378,essv9857377,essv9857383,essv9857388,essv9857382,essv9857381,essv9857387,essv9857384,essv9857386,essv9857385 M 2504 68 0 PRAMEF1,PRAMEF11 HG00102,HG00250,HG00610,HG00613,HG00657,HG00739,HG01064,HG01303,HG01396,HG01402,HG01438,HG01485,HG01492,HG01852,HG01861,HG01890,HG01917,HG02095,HG02108,HG02144,HG02180,HG02190,HG02271,HG02389,HG02391,HG02494,HG02558,HG02580,HG02594,HG02642,HG02727,HG02804,HG03049,HG03091,HG03133,HG03190,HG03209,HG03369,HG03388,HG03472,HG03521,HG03631,HG03645,HG03800,HG03802,HG03866,HG03928,HG03978,NA10847,NA11918,NA12414,NA12815,NA18525,NA18617,NA18622,NA18861,NA18923,NA18924,NA18997,NA19042,NA19043,NA19092,NA19236,NA19390,NA19393,NA19914,NA20818,NA21119 nsv1001422 1 12857863 12867954 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3466853 M 29084 1 0 "" esv3584476 1 12857863 12892309 CNV gain Mokhtar_et_al_2014 24956385 SNP array essv9838580 M 34 1 0 PRAMEF11 OA020 nsv438192 1 12860749 12868237 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468629,nssv468518 M 269 0 2 "" NA19101,NA19103 dgv121n54 1 12860749 12871327 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545474,nsv545464 M 17421 0 3 "" dgv122n54 1 12860749 12880356 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545466,nsv545465 M 17421 0 6 "" HGDP00702,HGDP00999,HGDP01254,HGDP01269 dgv7n27 1 12860749 12880356 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467171,nsv467283,nsv467394,nsv467505 M 1557 0 4 "" HGDP00702,HGDP00999,HGDP01254,HGDP01269 nsv545467 1 12860749 12883131 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710049,nssv710047,nssv710048 M 17421 2 1 "" nsv470696 1 12860749 12913895 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547704,nssv547706,nssv547705,nssv547707,nssv547708 M 443 5 0 HNRNPCL1,LOC649330,PRAMEF11 HGDP00072,HGDP00560,HGDP00572,HGDP00714,HGDP01317 dgv123n54 1 12860749 12913896 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545480,nsv545470,nsv545485,nsv545469 M 17421 37 63 HNRNPCL1,LOC649330,PRAMEF11 1780846321_A,1780854128_A,1780854216_A,1780854260_A,1780854261_A,1780854362_A,1780862085_A,1780862294_A,1782681216_A,1798860565_A,HGDP00021,HGDP00072,HGDP00262,HGDP00364,HGDP00560,HGDP00572,HGDP00694,HGDP00707,HGDP00714,HGDP00751,HGDP00856,HGDP00869,HGDP00945,HGDP00950,HGDP01103,HGDP01251,HGDP01306,HGDP01317,HGDP01352,HGDP01372,HGDP01399,HGDP01400,NINDS_109,NINDS_117,NINDS_134,NINDS_182,NINDS_198,NINDS_208,NINDS_219,NINDS_240,NINDS_253,NINDS_258,NINDS_266,NINDS_27,NINDS_50,NINDS_70,NINDS_83,NINDS_90 dgv8n27 1 12860749 12913896 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv456551,nsv456218,nsv469171,nsv460039,nsv455996,nsv469393,nsv456885,nsv458551,nsv457773,nsv468616,nsv457440,nsv460206,nsv460284,nsv460050,nsv457218,nsv460217,nsv460195,nsv458996,nsv460062,nsv460073,nsv468838,nsv455885,nsv457662,nsv460228,nsv460295,nsv459662,nsv458662,nsv456440,nsv460084,nsv458884,nsv460095,nsv457996,nsv460161,nsv456996,nsv456329,nsv460117,nsv459440,nsv460328,nsv460306,nsv460128,nsv457551,nsv459329,nsv468727,nsv460317,nsv456107,nsv456774,nsv455774,nsv459551,nsv460139,nsv460239,nsv456662,nsv460339,nsv467616,nsv457329,nsv460150,nsv458107,nsv460250,nsv460173,nsv459107,nsv460017,nsv457885,nsv458773,nsv459218,nsv460006,nsv467727,nsv468505,nsv460261,nsv458329,nsv458440,nsv460184,nsv460028 M 1557 0 71 HNRNPCL1,LOC649330,PRAMEF11 1780854095_A,1780854216_A,1780854341_A,1780854357_A,1780854384_A,1780862015_A,1780862229_A,1780862250_A,1780862263_A,1780862346_A,1780862390_A,1780862574_A,1782681236_A,1782681287_A,1787431167_A,1798860277_A,HGDP00106,HGDP00169,HGDP00251,HGDP00267,HGDP00279,HGDP00285,HGDP00351,HGDP00364,HGDP00423,HGDP00694,HGDP00732,HGDP00748,HGDP00751,HGDP00780,HGDP00781,HGDP00791,HGDP00813,HGDP00856,HGDP00869,HGDP00896,HGDP00945,HGDP00950,HGDP00964,HGDP01003,HGDP01010,HGDP01191,HGDP01296,HGDP01306,HGDP01321,HGDP01330,HGDP01338,HGDP01352,HGDP01360,HGDP01361,HGDP01363,HGDP01368,HGDP01369,HGDP01372,HGDP01375,HGDP01400,NINDS_109,NINDS_117,NINDS_134,NINDS_182,NINDS_198,NINDS_219,NINDS_240,NINDS_253,NINDS_258,NINDS_266,NINDS_27,NINDS_50,NINDS_70,NINDS_83,NINDS_90 dgv9n27 1 12860749 12913896 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460272,nsv467949,nsv457107,nsv459884,nsv459962,nsv460106,nsv468949,nsv468394,nsv468282,nsv459951,nsv459939,nsv458218,nsv468171,nsv459773,nsv459973,nsv459984,nsv468060,nsv459995,nsv469282,nsv469060,nsv455663,nsv467838 M 1557 22 0 HNRNPCL1,LOC649330,PRAMEF11 1780846321_A,1780854128_A,1780854260_A,1780854261_A,1780854362_A,1780862085_A,1780862294_A,1780862487_A,1782681216_A,1798860565_A,HGDP00021,HGDP00072,HGDP00262,HGDP00560,HGDP00572,HGDP00714,HGDP01033,HGDP01103,HGDP01251,HGDP01317,HGDP01399,NINDS_208 nsv817728 1 12860749 12913896 CNV gain+loss Wang_et_al_2007 17921354 SNP array nssv1417095,nssv1418336,nssv1417408,nssv1418245,nssv1418338,nssv1418244 M 112 4 2 HNRNPCL1,LOC649330,PRAMEF11 NA10847,NA12239,NA18529,NA18951,NA19092,NA19094 dgv124n54 1 12860749 12922611 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545495,nsv545468,nsv545497,nsv545481,nsv545488,nsv545491,nsv545493,nsv545496,nsv545492,nsv545479,nsv545487,nsv545478,nsv545494,nsv545484,nsv545483 M 17421 0 27 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 1780854357_A,1787431167_A,HGDP00169,HGDP00423,HGDP00709,HGDP00732,HGDP00791,HGDP01003,HGDP01010,HGDP01016,HGDP01296,HGDP01338,HGDP01368 dgv125n54 1 12860749 13051338 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545472,nsv545473 M 17421 0 2 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv1002419 1 12862229 12918079 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481472 M 29084 1 0 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 nsv999194 1 12862319 13015495 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479949 M 29084 1 0 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 dgv126n54 1 12865920 12880356 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545477,nsv545482 M 17421 0 2 "" dgv1n64 1 12865920 12913896 CNV loss Wang_et_al_2007 17921354 SNP array nsv817839,nsv818045,nsv817950 M 112 0 6 HNRNPCL1,LOC649330,PRAMEF11 NA10857,NA12044,NA12865,NA12874,NA18593,NA18965 esv3891859 1 12865920 13379877 CNV gain Suktitipat_et_al_2014 25118596 SNP array essv25788920 M 3017 1 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 nsv545486 1 12867068 12887549 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710118 M 17421 0 1 PRAMEF11 nsv1010920 1 12867078 12918079 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3481473,nssv3698764,nssv3698765,nssv3698766,nssv3476599,nssv3468483,nssv3476760,nssv3463893,nssv3481731,nssv3479801,nssv3465681,nssv3465684 M 29084 2 10 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 nsv829252 1 12867134 12867736 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440800 M 31 0 1 "" NA18969 esv2743842 1 12868753 12869065 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972333 M 96 0 1 "" SSM029 nsv2965 1 12870541 13185906 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10340,nssv5045,nssv9308,nssv3620 M 9 0 4 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA12878,NA18517,NA18956,NA19129 nsv829363 1 12870940 12872971 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440801 M 31 0 1 "" NA18969 nsv545489 1 12871327 12880356 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710121,nssv710120 M 17421 0 2 "" nsv545490 1 12871327 12899734 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710122 M 17421 0 1 PRAMEF11 esv2743853 1 12871334 12993311 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6669166,essv6764156,essv6917420,essv6843798,essv6742134,essv6807370,essv6784532,essv6675195,essv6950547,essv6793278,essv6668942,essv6910037,essv6863951,essv6747772,essv6847008 M 96 0 15 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF7,PRAMEF8 SSM005,SSM009,SSM011,SSM015,SSM017,SSM025,SSM031,SSM032,SSM053,SSM056,SSM063,SSM071,SSM075,SSM086,SSM089 dgv127n54 1 12875424 12919067 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545500,nsv545499,nsv545498,nsv545502,nsv545501 M 17421 0 13 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 HGDP00662 esv1063166 1 12876225 12876225 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4300681 M 2 1 0 "" HuRef dgv6e214 1 12877893 12948772 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing esv3585245,esv3585244 M 2504 0 237 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2,PRAMEF4 HG00100,HG00120,HG00126,HG00140,HG00176,HG00185,HG00244,HG00257,HG00278,HG00304,HG00358,HG00442,HG00445,HG00479,HG00584,HG01048,HG01055,HG01101,HG01102,HG01111,HG01113,HG01124,HG01131,HG01142,HG01162,HG01177,HG01183,HG01200,HG01251,HG01280,HG01305,HG01308,HG01312,HG01323,HG01326,HG01342,HG01344,HG01350,HG01354,HG01369,HG01372,HG01377,HG01412,HG01462,HG01498,HG01506,HG01537,HG01565,HG01572,HG01578,HG01599,HG01624,HG01628,HG01676,HG01682,HG01802,HG01845,HG01863,HG01878,HG01892,HG01893,HG01921,HG01923,HG01924,HG01927,HG01932,HG01933,HG01936,HG01938,HG01939,HG01942,HG01944,HG01947,HG01950,HG01953,HG01961,HG01967,HG01968,HG01971,HG01974,HG01979,HG01980,HG01988,HG01989,HG01990,HG01997,HG02002,HG02026,HG02147,HG02150,HG02252,HG02259,HG02266,HG02271,HG02272,HG02277,HG02282,HG02285,HG02286,HG02298,HG02299,HG02301,HG02304,HG02323,HG02345,HG02406,HG02449,HG02464,HG02490,HG02501,HG02549,HG02588,HG02666,HG02700,HG02715,HG02731,HG02840,HG02854,HG02968,HG02981,HG03007,HG03028,HG03040,HG03046,HG03060,HG03086,HG03135,HG03238,HG03241,HG03267,HG03298,HG03342,HG03401,HG03452,HG03538,HG03616,HG03693,HG03711,HG03722,HG03730,HG03755,HG03757,HG03784,HG03812,HG03815,HG03823,HG03837,HG03856,HG03888,HG03902,HG03926,HG03950,HG03951,HG04006,HG04019,HG04093,HG04161,HG04177,HG04206,HG04235,NA06994,NA10851,NA12044,NA12286,NA12383,NA12400,NA12413,NA12489,NA12546,NA12717,NA12873,NA12874,NA18501,NA18559,NA18567,NA18593,NA18611,NA18613,NA18614,NA18963,NA18965,NA18969,NA18981,NA18983,NA18990,NA18991,NA19017,NA19023,NA19024,NA19031,NA19038,NA19066,NA19083,NA19087,NA19114,NA19222,NA19331,NA19334,NA19428,NA19431,NA19437,NA19443,NA19475,NA19652,NA19661,NA19663,NA19700,NA19726,NA19732,NA19734,NA19735,NA19740,NA19741,NA19746,NA19747,NA19755,NA19762,NA19771,NA19786,NA19789,NA20314,NA20320,NA20351,NA20585,NA20589,NA20814,NA20828,NA20859,NA20887,NA20890,NA21102,NA21110,NA21114,NA21118,NA21123,NA21127,NA21144 nsv7172 1 12879694 13377142 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv11101,nssv7150,nssv7060,nssv11168,nssv5213,nssv9625,nssv2496,nssv10379,nssv9624,nssv5286,nssv382,nssv3714,nssv6080,nssv10403,nssv9329,nssv5133 M 9 0 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv460350 1 12880153 12913896 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536942 M 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 HGDP00662 dgv128n54 1 12880153 13125738 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545503,nsv545505 M 17421 0 2 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 nsv433182 1 12880356 12961027 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463063 M 9 0 1 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA15510 nsv1161161 1 12882985 12924596 CNV deletion Lou_et_al_2015 26073780 Sequencing,SNP array nssv4029398 M 369 0 1 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 nsv1161165 1 12882985 12983506 CNV duplication Lou_et_al_2015 26073780 Sequencing,SNP array nssv4029506 M 369 1 0 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF7,PRAMEF8 nsv1075770 1 12887499 12928900 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3770993 M 1 1 0 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2 KWP1 nsv955255 1 12888301 12894700 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001834 M 1 1 0 PRAMEF11 BILGI_BIOE nsv1139469 1 12888600 12891300 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977056 M 2 1 0 PRAMEF11 KWS2 esv3428728 1 12890165 12892963 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691774 M 185 1 0 PRAMEF11 NA12878 dgv6e201 1 12890623 12948407 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2743864,esv2743897 M 96 0 14 HNRNPCL1,LOC649330,PRAMEF11,PRAMEF2,PRAMEF4 SSM005,SSM009,SSM011,SSM015,SSM017,SSM025,SSM031,SSM032,SSM053,SSM063,SSM071,SSM075,SSM086,SSM089 dgv129n54 1 12890761 13014883 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545504,nsv545526,nsv545516,nsv545508,nsv545517 M 17421 0 6 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv1122299 1 12892048 12892115 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969750 M 2 0 1 "" KWS2 esv2743875 1 12892084 12909500 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6847008,essv6669166,essv6917420,essv6793278,essv6843798,essv6807370,essv6668942,essv6910037,essv6863951 M 96 0 9 HNRNPCL1,LOC649330 SSM005,SSM011,SSM015,SSM017,SSM031,SSM071,SSM075,SSM086,SSM089 nsv820528 1 12893066 13047331 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1419881 M 1 0 1 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA10851 nsv436469 1 12893250 12948757 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466583 M 2 0 1 HNRNPCL1,LOC649330,PRAMEF2,PRAMEF4 NA18505 dgv7e201 1 12893638 13187357 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2743886,esv2743953,esv2743931 M 96 0 14 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 SSM005,SSM006,SSM011,SSM015,SSM017,SSM029,SSM031,SSM032,SSM053,SSM063,SSM075,SSM086,SSM088,SSM089 dgv130n54 1 12894519 12923962 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545506,nsv545507 M 17421 0 3 HNRNPCL1,LOC649330,PRAMEF2 esv3338113 1 12894752 13183347 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808895 M 185 0 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA12878 esv3585246 1 12896438 12928826 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9857963,essv9857962,essv9857835,essv9857802,essv9857787,essv9857801,essv9857792,essv9857786,essv9857791,essv9857788,essv9857789,essv9857790,essv9857795,essv9857800,essv9857794,essv9857793,essv9857796,essv9857799,essv9857798,essv9857797,essv9857816,essv9857833,essv9857834,essv9857807,essv9857806,essv9857803,essv9857805,essv9857804,essv9857810,essv9857815,essv9857809,essv9857808,essv9857811,essv9857814,essv9857813,essv9857812,essv9857823,essv9857818,essv9857832,essv9857817,essv9857822,essv9857819,essv9857821,essv9857820,essv9857831,essv9857826,essv9857825,essv9857824,essv9857827,essv9857830,essv9857829,essv9857828,essv9857848,essv9857839,essv9857961,essv9857897,essv9857838,essv9857837,essv9857836,essv9857847,essv9857842,essv9857841,essv9857840,essv9857846,essv9857843,essv9857845,essv9857844,essv9857863,essv9857850,essv9857864,essv9857849,essv9857854,essv9857853,essv9857852,essv9857851,essv9857862,essv9857857,essv9857856,essv9857855,essv9857858,essv9857861,essv9857860,essv9857859,essv9857879,essv9857870,essv9857865,essv9857896,essv9857866,essv9857869,essv9857868,essv9857867,essv9857873,essv9857878,essv9857872,essv9857871,essv9857874,essv9857877,essv9857876,essv9857875,essv9857881,essv9857886,essv9857895,essv9857880,essv9857885,essv9857882,essv9857884,essv9857883,essv9857889,essv9857894,essv9857888,essv9857887,essv9857893,essv9857890,essv9857892,essv9857891,essv9857910,essv9857927,essv9857960,essv9857901,essv9857898,essv9857900,essv9857899,essv9857904,essv9857909,essv9857903,essv9857902,essv9857908,essv9857905,essv9857907,essv9857906,essv9857912,essv9857926,essv9857917,essv9857911,essv9857916,essv9857913,essv9857915,essv9857914,essv9857920,essv9857918,essv9857925,essv9857919,essv9857921,essv9857924,essv9857923,essv9857922,essv9857933,essv9857928,essv9857942,essv9857959,essv9857932,essv9857931,essv9857930,essv9857929,essv9857936,essv9857941,essv9857935,essv9857934,essv9857937,essv9857940,essv9857939,essv9857938,essv9857958,essv9857949,essv9857944,essv9857943,essv9857948,essv9857945,essv9857947,essv9857946,essv9857952,essv9857950,essv9857957,essv9857951,essv9857953,essv9857956,essv9857955,essv9857954,essv9857974,essv9857991,essv9857965,essv9857964,essv9857973,essv9857969,essv9857972,essv9857968,essv9857966,essv9857967,essv9857971,essv9857970,essv9857981,essv9857976,essv9857990,essv9857975,essv9857980,essv9857977,essv9857979,essv9857978,essv9857989,essv9857984,essv9857983,essv9857982,essv9857988,essv9857985,essv9857987,essv9857986,essv9857992,essv9857996,essv9857993,essv9857994,essv9857995,essv9857998,essv9857997 M 2504 0 213 HNRNPCL1,LOC649330,PRAMEF2 HG00100,HG00126,HG00140,HG00176,HG00185,HG00244,HG00257,HG00278,HG00304,HG00358,HG00442,HG00445,HG00479,HG00584,HG01048,HG01055,HG01101,HG01102,HG01111,HG01113,HG01124,HG01131,HG01142,HG01162,HG01177,HG01183,HG01251,HG01280,HG01305,HG01308,HG01312,HG01323,HG01326,HG01342,HG01344,HG01350,HG01354,HG01369,HG01372,HG01412,HG01462,HG01498,HG01506,HG01537,HG01565,HG01572,HG01578,HG01599,HG01624,HG01628,HG01676,HG01682,HG01802,HG01845,HG01863,HG01878,HG01892,HG01893,HG01921,HG01923,HG01924,HG01927,HG01932,HG01933,HG01936,HG01938,HG01939,HG01942,HG01944,HG01947,HG01950,HG01953,HG01961,HG01967,HG01968,HG01971,HG01974,HG01979,HG01980,HG01988,HG01989,HG01990,HG01997,HG02002,HG02026,HG02147,HG02150,HG02252,HG02259,HG02266,HG02271,HG02272,HG02277,HG02282,HG02285,HG02286,HG02298,HG02299,HG02301,HG02304,HG02345,HG02406,HG02464,HG02490,HG02501,HG02666,HG02715,HG02731,HG02854,HG02968,HG03007,HG03028,HG03040,HG03086,HG03135,HG03238,HG03241,HG03267,HG03298,HG03342,HG03538,HG03616,HG03693,HG03711,HG03722,HG03730,HG03755,HG03757,HG03784,HG03812,HG03815,HG03823,HG03856,HG03888,HG03902,HG03950,HG03951,HG04006,HG04019,HG04093,HG04161,HG04177,HG04206,HG04235,NA06994,NA10851,NA12044,NA12286,NA12383,NA12400,NA12413,NA12489,NA12546,NA12717,NA12873,NA12874,NA18559,NA18567,NA18593,NA18611,NA18613,NA18614,NA18963,NA18965,NA18981,NA18983,NA18991,NA19017,NA19023,NA19024,NA19031,NA19038,NA19066,NA19087,NA19331,NA19334,NA19428,NA19431,NA19437,NA19443,NA19475,NA19652,NA19661,NA19663,NA19700,NA19726,NA19732,NA19734,NA19735,NA19740,NA19741,NA19746,NA19747,NA19755,NA19762,NA19771,NA19786,NA19789,NA20314,NA20320,NA20351,NA20585,NA20589,NA20814,NA20859,NA20887,NA20890,NA21102,NA21114,NA21118,NA21123,NA21127,NA21144 dgv16n67 1 12897764 12920188 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829437,nsv829426,nsv829459,nsv829448 M 31 7 0 HNRNPCL1,LOC649330,PRAMEF2 AK10,NA18526,NA18564,NA18570,NA18947,NA18949,NA18972 esv2743908 1 12898017 12898360 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6669166,essv6917420,essv6847008,essv6843798,essv6807370,essv6910037,essv6863951 M 96 0 7 "" SSM005,SSM011,SSM015,SSM017,SSM075,SSM086,SSM089 nsv1077538 1 12898044 12898332 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772495 M 1 0 1 "" KWP1 esv2678231 1 12898628 13013341 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5596796 M 1151 0 1 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA19661 dgv131n54 1 12899734 12924612 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545511,nsv545509,nsv545515,nsv545513,nsv545514,nsv545512,nsv545510 M 17421 0 38 HNRNPCL1,LOC649330,PRAMEF2 dgv7e214 1 12901370 12921250 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing esv3585248,esv3585249 M 2504 392 0 HNRNPCL1,LOC649330,PRAMEF2 HG00102,HG00130,HG00146,HG00148,HG00157,HG00183,HG00189,HG00238,HG00250,HG00252,HG00282,HG00285,HG00308,HG00334,HG00339,HG00342,HG00351,HG00375,HG00376,HG00409,HG00410,HG00422,HG00436,HG00446,HG00452,HG00457,HG00458,HG00472,HG00475,HG00476,HG00500,HG00513,HG00525,HG00530,HG00531,HG00536,HG00543,HG00559,HG00560,HG00566,HG00581,HG00592,HG00593,HG00599,HG00607,HG00610,HG00613,HG00614,HG00620,HG00622,HG00623,HG00626,HG00628,HG00631,HG00634,HG00656,HG00657,HG00662,HG00663,HG00671,HG00675,HG00692,HG00699,HG00704,HG00705,HG00707,HG00728,HG00729,HG00739,HG00766,HG00864,HG00867,HG00879,HG00982,HG01064,HG01130,HG01136,HG01303,HG01356,HG01375,HG01402,HG01438,HG01485,HG01492,HG01596,HG01597,HG01598,HG01600,HG01710,HG01768,HG01783,HG01786,HG01794,HG01795,HG01797,HG01800,HG01805,HG01809,HG01812,HG01816,HG01840,HG01844,HG01846,HG01847,HG01849,HG01850,HG01851,HG01852,HG01853,HG01855,HG01860,HG01861,HG01866,HG01867,HG01868,HG01870,HG01872,HG01873,HG01874,HG01890,HG01915,HG01917,HG02012,HG02016,HG02019,HG02020,HG02029,HG02032,HG02051,HG02058,HG02067,HG02069,HG02072,HG02079,HG02081,HG02082,HG02086,HG02095,HG02108,HG02116,HG02121,HG02122,HG02127,HG02128,HG02130,HG02133,HG02137,HG02138,HG02140,HG02144,HG02153,HG02154,HG02156,HG02164,HG02165,HG02180,HG02181,HG02182,HG02185,HG02187,HG02188,HG02190,HG02232,HG02250,HG02309,HG02351,HG02356,HG02360,HG02379,HG02380,HG02389,HG02391,HG02392,HG02395,HG02397,HG02398,HG02409,HG02462,HG02491,HG02494,HG02512,HG02522,HG02555,HG02558,HG02580,HG02594,HG02601,HG02642,HG02643,HG02725,HG02727,HG02756,HG02786,HG02804,HG02840,HG02861,HG02881,HG02895,HG02982,HG03049,HG03081,HG03091,HG03133,HG03159,HG03190,HG03209,HG03228,HG03235,HG03240,HG03354,HG03369,HG03378,HG03388,HG03472,HG03490,HG03491,HG03521,HG03558,HG03631,HG03640,HG03645,HG03667,HG03679,HG03680,HG03691,HG03697,HG03705,HG03717,HG03742,HG03753,HG03770,HG03773,HG03777,HG03785,HG03787,HG03800,HG03802,HG03857,HG03858,HG03866,HG03872,HG03896,HG03916,HG03928,HG03953,HG03969,HG03973,HG03978,HG03990,HG04025,HG04026,HG04039,HG04056,HG04096,HG04146,HG04152,HG04176,HG04182,HG04183,HG04211,NA06989,NA10847,NA11918,NA11930,NA12003,NA12004,NA12414,NA12751,NA12761,NA12815,NA18525,NA18526,NA18531,NA18534,NA18535,NA18536,NA18539,NA18541,NA18543,NA18550,NA18553,NA18557,NA18560,NA18563,NA18564,NA18565,NA18566,NA18570,NA18573,NA18574,NA18577,NA18579,NA18592,NA18596,NA18599,NA18602,NA18606,NA18609,NA18610,NA18612,NA18616,NA18617,NA18619,NA18621,NA18622,NA18623,NA18625,NA18626,NA18629,NA18631,NA18636,NA18638,NA18639,NA18642,NA18644,NA18645,NA18647,NA18740,NA18745,NA18748,NA18861,NA18923,NA18924,NA18940,NA18941,NA18946,NA18947,NA18949,NA18950,NA18952,NA18957,NA18961,NA18964,NA18971,NA18972,NA18977,NA18982,NA18984,NA18990,NA18992,NA18994,NA18997,NA18998,NA19000,NA19001,NA19002,NA19005,NA19042,NA19043,NA19056,NA19058,NA19065,NA19067,NA19075,NA19079,NA19080,NA19085,NA19088,NA19089,NA19090,NA19091,NA19092,NA19096,NA19116,NA19190,NA19198,NA19236,NA19390,NA19393,NA19684,NA19779,NA19914,NA19916,NA20126,NA20296,NA20513,NA20760,NA20802,NA20818,NA20851,NA20856,NA20861,NA20877,NA20895,NA20896,NA20906,NA21099,NA21113,NA21119,NA21128,NA21130,NA21137 esv3585247 1 12901370 12921250 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9858088,essv9858217,essv9858022,essv9858005,essv9858023,essv9857999,essv9858004,essv9858003,essv9858000,essv9858002,essv9858001,essv9858007,essv9858021,essv9858012,essv9858006,essv9858011,essv9858008,essv9858010,essv9858009,essv9858015,essv9858020,essv9858014,essv9858013,essv9858016,essv9858019,essv9858018,essv9858017,essv9858028,essv9858037,essv9858087,essv9858054,essv9858026,essv9858027,essv9858025,essv9858024,essv9858031,essv9858029,essv9858036,essv9858030,essv9858035,essv9858032,essv9858034,essv9858033,essv9858039,essv9858053,essv9858044,essv9858038,essv9858043,essv9858040,essv9858042,essv9858041,essv9858052,essv9858047,essv9858045,essv9858046,essv9858048,essv9858051,essv9858050,essv9858049,essv9858055,essv9858086,essv9858060,essv9858069,essv9858056,essv9858059,essv9858058,essv9858057,essv9858063,essv9858068,essv9858062,essv9858061,essv9858064,essv9858067,essv9858066,essv9858065,essv9858071,essv9858076,essv9858085,essv9858070,essv9858075,essv9858072,essv9858074,essv9858073,essv9858079,essv9858084,essv9858078,essv9858077,essv9858080,essv9858083,essv9858082,essv9858081,essv9858151,essv9858118,essv9858092,essv9858101,essv9858216,essv9858091,essv9858090,essv9858089,essv9858100,essv9858093,essv9858095,essv9858094,essv9858096,essv9858099,essv9858097,essv9858098,essv9858103,essv9858108,essv9858117,essv9858102,essv9858104,essv9858107,essv9858106,essv9858105,essv9858109,essv9858116,essv9858111,essv9858110,essv9858112,essv9858115,essv9858114,essv9858113,essv9858121,essv9858133,essv9858124,essv9858120,essv9858150,essv9858119,essv9858123,essv9858122,essv9858125,essv9858132,essv9858127,essv9858126,essv9858128,essv9858131,essv9858129,essv9858130,essv9858135,essv9858140,essv9858149,essv9858134,essv9858139,essv9858136,essv9858138,essv9858137,essv9858143,essv9858141,essv9858148,essv9858142,essv9858144,essv9858147,essv9858145,essv9858146,essv9858156,essv9858182,essv9858165,essv9858153,essv9858152,essv9858155,essv9858215,essv9858154,essv9858157,essv9858159,essv9858164,essv9858158,essv9858160,essv9858163,essv9858161,essv9858162,essv9858167,essv9858172,essv9858181,essv9858166,essv9858171,essv9858168,essv9858169,essv9858170,essv9858175,essv9858173,essv9858180,essv9858174,essv9858176,essv9858179,essv9858178,essv9858177,essv9858197,essv9858188,essv9858184,essv9858214,essv9858183,essv9858187,essv9858186,essv9858185,essv9858191,essv9858189,essv9858196,essv9858190,essv9858192,essv9858195,essv9858194,essv9858193,essv9858199,essv9858204,essv9858213,essv9858198,essv9858203,essv9858200,essv9858202,essv9858201,essv9858207,essv9858212,essv9858206,essv9858205,essv9858208,essv9858211,essv9858210,essv9858209,essv9858244,essv9858228,essv9858227,essv9858222,essv9858221,essv9858220,essv9858218,essv9858219,essv9858223,essv9858226,essv9858225,essv9858224,essv9858234,essv9858229,essv9858277,essv9858243,essv9858233,essv9858230,essv9858232,essv9858231,essv9858242,essv9858237,essv9858236,essv9858235,essv9858241,essv9858238,essv9858240,essv9858239,essv9858250,essv9858259,essv9858276,essv9858246,essv9858249,essv9858245,essv9858248,essv9858247,essv9858258,essv9858253,essv9858252,essv9858251,essv9858257,essv9858254,essv9858256,essv9858255,essv9858261,essv9858275,essv9858260,essv9858266,essv9858265,essv9858262,essv9858264,essv9858263,essv9858269,essv9858274,essv9858268,essv9858267,essv9858270,essv9858273,essv9858272,essv9858271,essv9858291,essv9858282,essv9858308,essv9858278,essv9858281,essv9858280,essv9858279,essv9858285,essv9858290,essv9858284,essv9858283,essv9858289,essv9858286,essv9858288,essv9858287,essv9858307,essv9858298,essv9858293,essv9858292,essv9858297,essv9858294,essv9858296,essv9858295,essv9858301,essv9858306,essv9858300,essv9858299,essv9858305,essv9858302,essv9858304,essv9858303,essv9858309,essv9858314,essv9858310,essv9858313,essv9858312,essv9858311,essv9858317,essv9858316,essv9858315 M 2504 0 319 HNRNPCL1,LOC649330,PRAMEF2 HG00100,HG00120,HG00176,HG00185,HG00244,HG00250,HG00257,HG00278,HG00304,HG00321,HG00334,HG00342,HG00349,HG00360,HG00442,HG00445,HG00479,HG00524,HG00543,HG00580,HG00584,HG00596,HG00672,HG00684,HG00692,HG00982,HG01048,HG01055,HG01101,HG01102,HG01111,HG01113,HG01124,HG01131,HG01142,HG01162,HG01177,HG01183,HG01200,HG01251,HG01280,HG01305,HG01308,HG01312,HG01323,HG01326,HG01342,HG01344,HG01350,HG01354,HG01369,HG01372,HG01377,HG01383,HG01412,HG01440,HG01443,HG01462,HG01498,HG01537,HG01551,HG01565,HG01571,HG01572,HG01578,HG01596,HG01598,HG01599,HG01615,HG01624,HG01628,HG01676,HG01682,HG01776,HG01802,HG01806,HG01808,HG01845,HG01846,HG01847,HG01855,HG01859,HG01863,HG01868,HG01878,HG01880,HG01892,HG01893,HG01920,HG01921,HG01923,HG01927,HG01932,HG01933,HG01936,HG01938,HG01939,HG01942,HG01944,HG01947,HG01948,HG01950,HG01953,HG01954,HG01961,HG01967,HG01968,HG01971,HG01973,HG01974,HG01979,HG01980,HG01988,HG01989,HG01990,HG01997,HG02002,HG02008,HG02026,HG02031,HG02072,HG02087,HG02090,HG02116,HG02136,HG02144,HG02146,HG02147,HG02150,HG02156,HG02252,HG02259,HG02266,HG02271,HG02277,HG02282,HG02285,HG02286,HG02298,HG02299,HG02301,HG02304,HG02315,HG02323,HG02345,HG02360,HG02394,HG02406,HG02409,HG02449,HG02450,HG02461,HG02464,HG02490,HG02501,HG02549,HG02573,HG02588,HG02651,HG02666,HG02700,HG02715,HG02716,HG02722,HG02731,HG02772,HG02810,HG02840,HG02854,HG02855,HG02968,HG02981,HG03007,HG03028,HG03040,HG03046,HG03086,HG03099,HG03121,HG03135,HG03235,HG03241,HG03267,HG03294,HG03298,HG03342,HG03376,HG03401,HG03470,HG03538,HG03558,HG03616,HG03693,HG03711,HG03722,HG03730,HG03753,HG03755,HG03757,HG03784,HG03805,HG03812,HG03815,HG03823,HG03837,HG03856,HG03858,HG03868,HG03888,HG03902,HG03950,HG03951,HG04006,HG04019,HG04093,HG04094,HG04161,HG04162,HG04177,HG04206,HG04235,NA06994,NA10851,NA12044,NA12286,NA12383,NA12400,NA12413,NA12489,NA12546,NA12718,NA12763,NA12873,NA12874,NA18501,NA18508,NA18559,NA18567,NA18591,NA18592,NA18606,NA18611,NA18614,NA18621,NA18645,NA18941,NA18946,NA18951,NA18963,NA18965,NA18969,NA18981,NA18983,NA18990,NA18991,NA19000,NA19017,NA19023,NA19024,NA19031,NA19038,NA19066,NA19079,NA19083,NA19087,NA19114,NA19222,NA19316,NA19319,NA19331,NA19334,NA19380,NA19394,NA19428,NA19431,NA19437,NA19443,NA19475,NA19652,NA19661,NA19663,NA19681,NA19700,NA19726,NA19732,NA19734,NA19735,NA19740,NA19746,NA19747,NA19755,NA19762,NA19770,NA19771,NA19786,NA19789,NA20274,NA20314,NA20320,NA20351,NA20585,NA20589,NA20810,NA20814,NA20828,NA20859,NA20887,NA20890,NA20908,NA21102,NA21110,NA21111,NA21114,NA21118,NA21123,NA21127,NA21130,NA21142,NA21144 nsv819147 1 12904000 13171318 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418797 M 2 1 0 HNRNPCL1,LOC649330,PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 AK1 nsv821616 1 12904306 13711215 CNV gain Sebat_et_al_2004 15273396 ROMA nssv1421363,nssv1421290,nssv1421374,nssv1421179,nssv1421352,nssv1421341 M 31 6 0 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 esv2743920 1 12904579 12909510 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6764156 M 96 0 1 HNRNPCL1,LOC649330 SSM063 esv2675529 1 12907342 13183072 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6075220,essv6274420,essv6043566,essv6562809,essv5540544,essv6454116,essv5937542,essv6560398,essv5512955,essv6323765,essv5724395,essv6182285,essv6037647,essv6464502,essv6032809,essv6377713 M 1151 0 16 HNRNPCL1,HNRNPCP5,LOC649330,PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF23,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 HG00126,HG00369,HG00534,HG00613,HG00684,HG01067,HG01173,HG01365,NA12718,NA18867,NA18982,NA19436,NA19455,NA19701,NA19713,NA19917 esv2743942 1 12908832 12946292 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6675195 M 96 0 1 PRAMEF2,PRAMEF4 SSM032 nsv442514 1 12909237 12927107 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617058,nssv1616980,nssv1616824,nssv1617069,nssv1616924,nssv1617102,nssv1617091,nssv1616969,nssv1616713,nssv1617013,nssv1616858,nssv1616802,nssv1617246,nssv1617035,nssv1616725,nssv1617202,nssv1617257,nssv1617046,nssv1617235,nssv1617080,nssv1617002,nssv1616791,nssv1617302,nssv1616813,nssv1616736,nssv1616780,nssv1616658,nssv1616836,nssv1617213,nssv1616702,nssv1617224,nssv1617157,nssv1616769,nssv1616880,nssv1617268,nssv1617191,nssv1617169,nssv1616947,nssv1617024,nssv1616891,nssv1616747,nssv1616902,nssv1617280,nssv1616991,nssv1617124,nssv1616669,nssv1616680,nssv1616691,nssv1617113,nssv1616869,nssv1616958,nssv1617180,nssv1617146,nssv1617313,nssv1616847,nssv1616935,nssv1617135,nssv1616913,nssv1617291,nssv1616758 M 270 31 29 PRAMEF2 NA06994,NA07345,NA07348,NA10838,NA10847,NA10851,NA10857,NA12003,NA12004,NA12044,NA12057,NA12239,NA12717,NA12751,NA12753,NA12763,NA12815,NA12864,NA12865,NA12873,NA12874,NA12875,NA18501,NA18506,NA18508,NA18526,NA18550,NA18563,NA18564,NA18566,NA18570,NA18593,NA18609,NA18611,NA18612,NA18622,NA18636,NA18861,NA18863,NA18940,NA18949,NA18951,NA18952,NA18964,NA18965,NA18969,NA18971,NA18972,NA18981,NA18991,NA18992,NA18997,NA18998,NA19005,NA19092,NA19103,NA19116,NA19127,NA19129,NA19222 dgv132n54 1 12909239 12921110 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545519,nsv545518,nsv545522,nsv545525 M 17421 0 4 PRAMEF2 esv3577735 1 12910004 13709344 CNV loss Uddin_et_al_2014 25503493 SNP array essv9797088 M 873 0 1 HNRNPCP5,PRAMEF10,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 401661HD dgv10n27 1 12911200 12913896 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460383,nsv460395,nsv460417,nsv460406,nsv460428,nsv460450,nsv460439,nsv460461,nsv460361,nsv460472,nsv460372 M 1557 0 11 "" HGDP00467,HGDP00541,HGDP00702,HGDP00832,HGDP00837,HGDP00846,HGDP00849,HGDP00876,HGDP00984,HGDP00995,HGDP00999 nsv545520 1 12911200 12913896 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173752,nssv1173753,nssv1173754,nssv1173758,nssv1173755,nssv1173756,nssv1173757,nssv1173759,nssv1173761,nssv1173760,nssv1173762,nssv1173763,nssv1173750,nssv1173765,nssv1173751,nssv1173764,nssv1173766,nssv1173767 M 17421 0 18 "" HGDP00467,HGDP00541,HGDP00702,HGDP00830,HGDP00832,HGDP00833,HGDP00834,HGDP00837,HGDP00844,HGDP00846,HGDP00847,HGDP00848,HGDP00849,HGDP00850,HGDP00876,HGDP00984,HGDP00995,HGDP00999 dgv133n54 1 12911200 12919434 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545523,nsv545524,nsv545521 M 17421 0 4 PRAMEF2 nsv955256 1 12913801 12949300 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001845 M 1 1 0 PRAMEF2,PRAMEF4 BILGI_BIOE dgv134n54 1 12915847 13052921 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545527,nsv545528 M 17421 2 0 PRAMEF10,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 dgv38n106 1 12923300 12927700 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nsv1118428,nsv1141128 M 2 2 0 "" KWS1,KWS2 nsv1075771 1 12930299 12932400 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3763320 M 1 1 0 "" KWP1 nsv1110127 1 12930300 12937700 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3959392 M 2 1 0 "" KWS1 nsv1141129 1 12930300 12949200 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3992636 M 2 1 0 PRAMEF4 KWS2 nsv1075772 1 12932599 12950200 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3772462 M 1 1 0 PRAMEF4 KWP1 esv3326797 1 12933965 12935263 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691776 M 185 1 0 "" NA12878 esv3585250 1 12935657 13049137 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9858720,essv9858737,essv9858714,essv9858719,essv9858713,essv9858718,essv9858715,essv9858717,essv9858716,essv9858727,essv9858722,essv9858736,essv9858721,essv9858726,essv9858723,essv9858725,essv9858724,essv9858730,essv9858735,essv9858729,essv9858728,essv9858734,essv9858731,essv9858733,essv9858732,essv9858752,essv9858743,essv9858738,essv9858742,essv9858739,essv9858741,essv9858740,essv9858746,essv9858751,essv9858745,essv9858744,essv9858750,essv9858747,essv9858749,essv9858748,essv9858754,essv9858759,essv9858753,essv9858758,essv9858755,essv9858757,essv9858756,essv9858762,essv9858767,essv9858761,essv9858760,essv9858763,essv9858766,essv9858765,essv9858764 M 2504 0 55 PRAMEF10,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 HG00442,HG01108,HG01176,HG01889,HG01915,HG02136,HG02471,HG02511,HG02574,HG02666,HG02716,HG02768,HG02805,HG02810,HG02814,HG02816,HG02896,HG02938,HG02941,HG02946,HG02981,HG02983,HG03007,HG03025,HG03055,HG03057,HG03082,HG03095,HG03099,HG03100,HG03112,HG03124,HG03126,HG03163,HG03265,HG03268,HG03397,HG03428,HG03432,HG03469,HG03548,HG03563,HG04161,NA18499,NA18505,NA18969,NA19066,NA19083,NA19118,NA19190,NA19394,NA19909,NA20282,NA20298,NA20342 dgv135n54 1 12939393 13011457 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545530,nsv545531,nsv545529,nsv545533 M 17421 0 5 PRAMEF10,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nsv1118429 1 12943300 12945500 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3958935 M 2 1 0 PRAMEF4 KWS1 esv3435358 1 12943865 12945463 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691777 M 185 1 0 PRAMEF4 NA12878 nsv958827 1 12947662 12948053 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005182 M 1 0 1 "" BILGI_BIOE esv2665195 1 12949845 12966192 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5737883,essv6035703,essv5403358,essv6170724,essv5702422,essv6094799,essv5699349,essv6305066,essv5828485,essv6179555 M 1151 0 10 PRAMEF10 NA19661,NA19663,NA19664,NA19681,NA19726,NA19746,NA19747,NA19770,NA19782,NA19789 nsv545532 1 12951774 12985238 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710207 M 17421 0 1 PRAMEF10,PRAMEF7,PRAMEF8 nsv1075581 1 12961299 12966500 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3767720 M 1 0 1 "" KWP1 nsv945775 1 12961351 12974577 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751582,nssv1751565,nssv1754273,nssv1751540,nssv1754281,nssv1751525,nssv1751528,nssv1751568,nssv1751521,nssv1751538,nssv1751576,nssv1751530,nssv1751522,nssv1751533,nssv1751578,nssv1751549,nssv1754286,nssv1751554,nssv1754284,nssv1751536,nssv1754277,nssv1751545,nssv1751581,nssv1754272,nssv1751524,nssv1751567,nssv1754282,nssv1751526,nssv1754275,nssv1751562,nssv1754278,nssv1751563,nssv1751579,nssv1751552,nssv1751577,nssv1751569,nssv1751515,nssv1751559,nssv1751532,nssv1751523,nssv1751583,nssv1751571,nssv1754280,nssv1751534,nssv1751584,nssv1751547,nssv1751574,nssv1751548,nssv1751580,nssv1751537,nssv1754274,nssv1751544,nssv1751517,nssv1751557,nssv1754283,nssv1751573,nssv1751516,nssv1751535,nssv1751529,nssv1751555,nssv1754279,nssv1751560,nssv1754276,nssv1751566,nssv1754285,nssv1751541,nssv1751519,nssv1751572,nssv1754287,nssv1751550,nssv1751518,nssv1751527,nssv1751539,nssv1751558,nssv1751543,nssv1751546,nssv1751551,nssv1751556,nssv1751561,nssv1751570 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945776 1 12974577 13052998 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752294,nssv1752283,nssv1751595,nssv1752278,nssv1751590,nssv1752282,nssv1751617,nssv1751615,nssv1751616,nssv1752264,nssv1752295,nssv1751631,nssv1751610,nssv1751623,nssv1751587,nssv1752277,nssv1751598,nssv1751639,nssv1751606,nssv1752261,nssv1752289,nssv1752284,nssv1751600,nssv1751611,nssv1751591,nssv1752266,nssv1751596,nssv1751627,nssv1751620,nssv1751618,nssv1751612,nssv1752272,nssv1751588,nssv1752263,nssv1751603,nssv1751637,nssv1751609,nssv1751629,nssv1751599,nssv1751632,nssv1751589,nssv1751626,nssv1752292,nssv1752267,nssv1751607,nssv1751628,nssv1752291,nssv1751621,nssv1752293,nssv1752271,nssv1751592,nssv1752305,nssv1752286,nssv1752298,nssv1751601,nssv1752297,nssv1751594,nssv1751633,nssv1752288,nssv1752303,nssv1751593,nssv1751636,nssv1751605,nssv1752306,nssv1752287,nssv1752299,nssv1751602,nssv1752302,nssv1752296,nssv1752276,nssv1751604,nssv1751642,nssv1751640,nssv1751613,nssv1751634,nssv1752285,nssv1751624,nssv1751585,nssv1751614,nssv1752262,nssv1752260,nssv1751635,nssv1752281,nssv1752269,nssv1752304,nssv1752300,nssv1752273,nssv1752280,nssv1751643,nssv1752265,nssv1752275,nssv1752307,nssv1752270,nssv1752274,nssv1751622,nssv1751625,nssv1751638 M 97 10 0 PRAMEF22,PRAMEF6,PRAMEF7,PRAMEF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1139471 1 12980600 12992100 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977058 M 2 1 0 "" KWS2 nsv545534 1 12981060 12998179 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710210 M 17421 0 1 "" nsv545535 1 12981781 13028837 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710211 M 17421 0 1 PRAMEF6 nsv1128588 1 12985400 12990300 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3960499 M 2 1 0 "" KWS1 nsv1075773 1 12985899 12994000 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3771227 M 1 1 0 "" KWP1 esv3891636 1 12995510 13028837 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25784075,essv25784392,essv25781834,essv25779830 M 3017 0 4 PRAMEF6 nsv545536 1 12995510 13051338 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710212 M 17421 0 1 PRAMEF22,PRAMEF6 nsv508902 1 12998039 13135946 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619771,nssv623773 M 4 2 0 PRAMEF22,PRAMEF23,PRAMEF5,PRAMEF6 NA10860,NA18994 nsv510936 1 12998039 13649130 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621649,nssv624358 M 4 0 0 HNRNPCP5,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA15510,NA18994 esv1004322 1 12998381 13052998 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586195 M 3 1 0 PRAMEF22,PRAMEF6 HuRef nsv945564 1 13002444 13005066 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572291,nssv2572340,nssv2572326,nssv2572338,nssv2572307,nssv2572279,nssv2572330,nssv2572265,nssv2572303,nssv2572273,nssv2572332,nssv2572335,nssv2572310,nssv2572280,nssv2572313,nssv2572278,nssv2572289,nssv2572343,nssv2572312,nssv2572269,nssv2572296,nssv2572344,nssv2572297,nssv2572272,nssv2572290,nssv2572293,nssv2572304,nssv2572283,nssv2572301,nssv2572274,nssv2572328,nssv2572282,nssv2572317,nssv2572341,nssv2572311,nssv2572267,nssv2572333,nssv2572295,nssv2572331,nssv2572276,nssv2572318,nssv2572339,nssv2572264,nssv2572268,nssv2572315,nssv2572277,nssv2572287,nssv2572271,nssv2572327,nssv2572270,nssv2572319,nssv2572266,nssv2572322,nssv2572284,nssv2572314,nssv2572336,nssv2572324,nssv2572342,nssv2572302,nssv2572288,nssv2572309,nssv2572286,nssv2572320,nssv2572285,nssv2572321,nssv2572275,nssv2572334,nssv2572292,nssv2572294,nssv2572337,nssv2572298,nssv2572281,nssv2572323,nssv2572300,nssv2572308,nssv2572306,nssv2572316,nssv2572305,nssv2572299,nssv2572325 M 97 10 0 PRAMEF6 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv14e199 1 13009645 13047292 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2664955,esv2662684 M 1151 0 355 PRAMEF22 HG00403,HG00404,HG00419,HG00421,HG00422,HG00428,HG00442,HG00443,HG00448,HG00449,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00537,HG00542,HG00543,HG00554,HG00557,HG00559,HG00565,HG00566,HG00580,HG00583,HG00589,HG00592,HG00593,HG00596,HG00607,HG00608,HG00614,HG00619,HG00620,HG00625,HG00626,HG00634,HG00638,HG00640,HG00651,HG00654,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00699,HG00701,HG00704,HG00705,HG00707,HG00708,HG00731,HG00732,HG01047,HG01051,HG01052,HG01055,HG01061,HG01066,HG01069,HG01073,HG01075,HG01079,HG01080,HG01082,HG01083,HG01097,HG01101,HG01102,HG01107,HG01167,HG01168,HG01171,HG01174,HG01176,HG01182,HG01183,HG01188,HG01197,HG01198,HG01204,NA06984,NA06994,NA07037,NA07048,NA07051,NA07056,NA07357,NA11843,NA11893,NA11920,NA11932,NA11992,NA11993,NA11995,NA12003,NA12043,NA12044,NA12046,NA12058,NA12156,NA12287,NA12340,NA12341,NA12342,NA12347,NA12399,NA12413,NA12414,NA12546,NA12716,NA12717,NA12749,NA12750,NA12751,NA12763,NA12776,NA12813,NA18526,NA18534,NA18537,NA18538,NA18541,NA18542,NA18543,NA18545,NA18547,NA18548,NA18550,NA18553,NA18555,NA18559,NA18560,NA18561,NA18563,NA18564,NA18565,NA18566,NA18567,NA18577,NA18579,NA18582,NA18592,NA18593,NA18602,NA18603,NA18606,NA18610,NA18612,NA18613,NA18614,NA18615,NA18616,NA18618,NA18620,NA18621,NA18622,NA18624,NA18626,NA18627,NA18628,NA18631,NA18632,NA18633,NA18635,NA18636,NA18638,NA18940,NA18941,NA18942,NA18945,NA18947,NA18948,NA18950,NA18951,NA18952,NA18956,NA18964,NA18965,NA18971,NA18973,NA18980,NA18981,NA18982,NA18985,NA18986,NA18987,NA18989,NA18990,NA19000,NA19002,NA19003,NA19005,NA19012,NA19054,NA19056,NA19058,NA19059,NA19060,NA19065,NA19066,NA19067,NA19070,NA19076,NA19079,NA19080,NA19082,NA19083,NA19084,NA19085,NA19088,NA19312,NA19313,NA19315,NA19316,NA19317,NA19318,NA19319,NA19327,NA19331,NA19332,NA19334,NA19346,NA19360,NA19372,NA19373,NA19375,NA19377,NA19379,NA19380,NA19382,NA19390,NA19393,NA19395,NA19396,NA19397,NA19399,NA19403,NA19404,NA19428,NA19429,NA19430,NA19435,NA19436,NA19437,NA19438,NA19439,NA19443,NA19445,NA19446,NA19448,NA19453,NA19455,NA19456,NA19457,NA19463,NA19466,NA19467,NA19469,NA19472,NA19474,NA19651,NA19654,NA19655,NA19657,NA19660,NA19663,NA19675,NA19676,NA19678,NA19679,NA19681,NA19716,NA19717,NA19719,NA19720,NA19722,NA19723,NA19725,NA19726,NA19731,NA19746,NA19747,NA19749,NA19756,NA19758,NA19759,NA19761,NA19762,NA19770,NA19773,NA19774,NA19776,NA19779,NA19780,NA19785,NA19786,NA19789,NA20502,NA20506,NA20508,NA20509,NA20510,NA20515,NA20516,NA20517,NA20518,NA20520,NA20522,NA20524,NA20526,NA20534,NA20535,NA20537,NA20540,NA20541,NA20542,NA20544,NA20585,NA20588,NA20589,NA20753,NA20756,NA20758,NA20765,NA20773,NA20774,NA20778,NA20786,NA20790,NA20792,NA20801,NA20804,NA20805,NA20808,NA20810 nsv1143436 1 13011200 13047700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980634 M 2 0 1 PRAMEF22 KWS1 nsv433183 1 13014884 13189824 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463064 M 9 0 1 HNRNPCP5,PRAMEF22,PRAMEF23,PRAMEF5 NA19129 nsv1112520 1 13017600 13039400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3966620 M 2 0 1 PRAMEF22 KWS2 nsv545537 1 13025563 13052921 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710213 M 17421 1 0 PRAMEF22 nsv953503 1 13027001 13166100 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001856 M 1 0 1 PRAMEF22,PRAMEF23,PRAMEF5 BILGI_BIOE nsv1121749 1 13044800 13047700 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968398 M 2 0 1 "" KWS2 nsv1075774 1 13047099 13052900 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3767741 M 1 1 0 "" KWP1 nsv821036 1 13047332 13052938 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1419992 M 1 1 0 "" NA10851 nsv1075173 1 13052899 13320100 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3771979 M 1 0 1 HNRNPCP5,PRAMEF23,PRAMEF5 KWP1 esv1010773 1 13102999 13124417 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586120 M 3 1 0 PRAMEF23,PRAMEF5 HuRef nsv820886 1 13103023 13148421 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420103 M 1 0 1 PRAMEF23,PRAMEF5 NA10851 esv27872 1 13103023 13219695 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19875,esv10209,esv10927,esv13674,esv19236,esv20553,esv19008,esv13717,esv20862,esv12755 M 40 14 6 HNRNPCP5,PRAMEF23,PRAMEF5 NA11894,NA12004,NA12044,NA12239,NA12287,NA12414,NA12489,NA12878,NA18517,NA18523,NA18858,NA18861,NA19099,NA19108,NA19129,NA19190,NA19225 nsv945777 1 13103076 13219555 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752327,nssv1752370,nssv1752393,nssv1752387,nssv1752401,nssv1752383,nssv1752398,nssv1752386,nssv1752330,nssv1752333,nssv1752310,nssv1752409,nssv1752402,nssv1752375,nssv1752324,nssv1752338,nssv1752325,nssv1752360,nssv1752395,nssv1752351,nssv1752331,nssv1752392,nssv1752309,nssv1752352,nssv1752315,nssv1752381,nssv1752311,nssv1752355,nssv1752332,nssv1752414,nssv1752342,nssv1752353,nssv1752322,nssv1752388,nssv1752314,nssv1752337,nssv1752399,nssv1752343,nssv1752335,nssv1752373,nssv1752397,nssv1752371,nssv1752313,nssv1752410,nssv1752319,nssv1752344,nssv1752320,nssv1752350,nssv1752316,nssv1752369,nssv1752326,nssv1752359,nssv1752394,nssv1752390,nssv1752396,nssv1752384,nssv1752339,nssv1752382,nssv1752317,nssv1752385,nssv1752318,nssv1752405,nssv1752340,nssv1752346,nssv1752403,nssv1752379,nssv1752328,nssv1752376,nssv1752329,nssv1752364,nssv1752321,nssv1752361,nssv1752374,nssv1752363,nssv1752365,nssv1752368,nssv1752412,nssv1752349,nssv1752354,nssv1752308,nssv1752362,nssv1752413,nssv1752357,nssv1752358,nssv1752408,nssv1752406,nssv1752380,nssv1752377,nssv1752366,nssv1752348,nssv1752407,nssv1752391,nssv1752336,nssv1752347,nssv1752372,nssv1752404,nssv1752341 M 97 10 0 HNRNPCP5,PRAMEF23,PRAMEF5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545538 1 13103575 13176463 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710214,nssv710215 M 17421 0 2 PRAMEF23,PRAMEF5 dgv136n54 1 13112332 13117481 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545540,nsv545539 M 17421 0 2 PRAMEF23,PRAMEF5 nsv945565 1 13112611 13114413 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572361,nssv2572707,nssv2572376,nssv2572704,nssv2572346,nssv2572368,nssv2572362,nssv2572696,nssv2572348,nssv2572713,nssv2572729,nssv2572708,nssv2572728,nssv2572717,nssv2572374,nssv2572379,nssv2572360,nssv2572712,nssv2572350,nssv2572719,nssv2572373,nssv2572720,nssv2572354,nssv2572385,nssv2572347,nssv2572715,nssv2572363,nssv2572384,nssv2572724,nssv2572382,nssv2572730,nssv2572381,nssv2572359,nssv2572387,nssv2572355,nssv2572714,nssv2572357,nssv2572706,nssv2572731,nssv2572722,nssv2572364,nssv2572372,nssv2572351,nssv2572711,nssv2572353,nssv2572702,nssv2572726,nssv2572716,nssv2572352,nssv2572699,nssv2572356,nssv2572383,nssv2572367,nssv2572375,nssv2572365,nssv2572710,nssv2572723,nssv2572371,nssv2572349,nssv2572703,nssv2572366,nssv2572378,nssv2572358,nssv2572705,nssv2572727,nssv2572377,nssv2572732,nssv2572701,nssv2572725,nssv2572380,nssv2572369,nssv2572718,nssv2572721,nssv2572345,nssv2572697,nssv2572386,nssv2572370,nssv2572698,nssv2572700,nssv2572709 M 97 10 0 PRAMEF23,PRAMEF5 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3891081 1 13113724 13135428 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25784921,essv25783365 M 3017 0 2 PRAMEF5 dgv15e199 1 13119145 13141792 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2659331,esv2663624,esv2666826 M 1151 0 400 "" HG00403,HG00404,HG00418,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00556,HG00557,HG00559,HG00560,HG00565,HG00566,HG00577,HG00578,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00593,HG00595,HG00596,HG00607,HG00608,HG00611,HG00613,HG00614,HG00619,HG00620,HG00625,HG00626,HG00628,HG00629,HG00634,HG00635,HG00650,HG00651,HG00653,HG00654,HG00656,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00692,HG00693,HG00698,HG00699,HG00701,HG00705,HG00707,HG00708,HG01124,HG01125,HG01134,HG01136,HG01137,HG01140,HG01148,HG01149,HG01250,HG01251,HG01253,HG01342,HG01350,HG01351,HG01353,HG01357,HG01359,HG01360,HG01365,HG01366,HG01374,HG01375,HG01377,HG01378,HG01383,HG01384,HG01389,HG01390,HG01437,HG01440,HG01441,HG01455,HG01461,HG01462,HG01489,HG01491,HG01492,HG01495,HG01498,HG01550,HG01551,NA06986,NA06989,NA06994,NA07000,NA07037,NA07048,NA07051,NA07056,NA07346,NA07347,NA10851,NA11829,NA11830,NA11831,NA11832,NA11881,NA11892,NA11894,NA11919,NA11920,NA11930,NA11931,NA11933,NA11992,NA11993,NA11994,NA12003,NA12044,NA12045,NA12046,NA12144,NA12154,NA12155,NA12156,NA12249,NA12272,NA12275,NA12286,NA12287,NA12341,NA12347,NA12348,NA12383,NA12399,NA12400,NA12716,NA12717,NA12750,NA12761,NA12763,NA12775,NA12776,NA12778,NA12813,NA12827,NA12828,NA12842,NA12843,NA18486,NA18489,NA18498,NA18499,NA18501,NA18502,NA18505,NA18507,NA18508,NA18516,NA18520,NA18522,NA18526,NA18532,NA18534,NA18535,NA18538,NA18539,NA18541,NA18542,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18553,NA18555,NA18557,NA18558,NA18559,NA18560,NA18562,NA18563,NA18564,NA18566,NA18567,NA18570,NA18571,NA18572,NA18573,NA18574,NA18576,NA18577,NA18579,NA18592,NA18593,NA18595,NA18599,NA18602,NA18603,NA18605,NA18606,NA18608,NA18609,NA18610,NA18612,NA18614,NA18615,NA18617,NA18618,NA18619,NA18620,NA18621,NA18622,NA18624,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18853,NA18858,NA18867,NA18868,NA18870,NA18907,NA18908,NA18910,NA18912,NA18916,NA18917,NA18924,NA18933,NA18940,NA18941,NA18942,NA18943,NA18944,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18961,NA18963,NA18964,NA18965,NA18967,NA18971,NA18972,NA18974,NA18976,NA18977,NA18980,NA18981,NA18982,NA18983,NA18984,NA18987,NA18989,NA18999,NA19000,NA19002,NA19004,NA19005,NA19007,NA19009,NA19010,NA19054,NA19055,NA19056,NA19058,NA19059,NA19060,NA19062,NA19063,NA19065,NA19066,NA19067,NA19068,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19083,NA19085,NA19087,NA19088,NA19093,NA19099,NA19108,NA19114,NA19119,NA19129,NA19138,NA19144,NA19152,NA19153,NA19160,NA19171,NA19189,NA19190,NA19198,NA19204,NA19213,NA19223,NA19225,NA19235,NA19648,NA19651,NA19652,NA19655,NA19661,NA19663,NA19664,NA19675,NA19678,NA19679,NA19681,NA19682,NA19685,NA19716,NA19717,NA19719,NA19722,NA19723,NA19725,NA19726,NA19728,NA19729,NA19731,NA19732,NA19747,NA19750,NA19758,NA19761,NA19762,NA19770,NA19771,NA19776,NA19777,NA19780,NA19782,NA19783,NA19785,NA19788,NA19789 nsv545541 1 13137578 13218946 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710218 M 17421 0 1 HNRNPCP5 dgv17n67 1 13142545 13188170 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829470,nsv829492,nsv829481 M 31 6 0 HNRNPCP5 AK4,AK8,NA18564,NA18566,NA18592,NA18947 nsv1139472 1 13142600 13145200 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977059 M 2 1 0 "" KWS2 nsv545542 1 13142720 13174952 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710219 M 17421 0 1 "" nsv112 1 13159771 13162302 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv112 M 1 1 0 "" NA15510 nsv821333 1 13161724 13219695 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420214 M 1 1 0 HNRNPCP5 NA10851 nsv1149137 1 13163099 13168700 CNV duplication John_et_al_2014 26484159 Sequencing nssv4002647 M 1 1 0 "" KWB1 nsv1146025 1 13168899 13181700 CNV duplication John_et_al_2014 26484159 Sequencing nssv3997389 M 1 1 0 "" KWB1 dgv16e212 1 13169606 13709344 CNV loss Uddin_et_al_2014 25503493 SNP array esv3577736,esv3577739 M 873 0 2 HNRNPCP5,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 400930MK,401235IA nsv545543 1 13174109 13178497 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710220 M 17421 0 1 "" esv3577737 1 13174615 13186871 CNV loss Uddin_et_al_2014 25503493 SNP array essv9797310 M 873 0 1 HNRNPCP5 401792KR nsv953504 1 13176501 13188000 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001867 M 1 1 0 HNRNPCP5 BILGI_BIOE esv3585252 1 13176833 13182837 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9858868,essv9858869,essv9858870,essv9858867,essv9858871,essv9858872,essv9858874,essv9858873,essv9858866,essv9858865,essv9858875,essv9858876,essv9858881,essv9858880,essv9858877,essv9858879,essv9858878,essv9858886,essv9858883,essv9858882,essv9858885,essv9858884,essv9858864,essv9858863,essv9858862,essv9858861,essv9858834,essv9858860,essv9858833,essv9858832,essv9858831,essv9858830,essv9858825,essv9858826,essv9858829,essv9858828,essv9858827,essv9858843,essv9858859,essv9858842,essv9858858,essv9858857,essv9858841,essv9858840,essv9858835,essv9858836,essv9858839,essv9858838,essv9858837,essv9858849,essv9858847,essv9858856,essv9858848,essv9858846,essv9858845,essv9858844,essv9858855,essv9858851,essv9858850,essv9858854,essv9858853,essv9858852 M 2504 0 62 "" HG00118,HG00421,HG00478,HG00537,HG01190,HG01785,HG01808,HG01986,HG02090,HG02152,HG02325,HG02332,HG02419,HG02722,HG02728,HG02771,HG02839,HG02851,HG02881,HG02882,HG03040,HG03073,HG03077,HG03078,HG03081,HG03114,HG03247,HG03291,HG03313,HG03352,HG03457,HG03460,HG03514,HG03567,HG03663,HG03756,HG04002,NA12287,NA12815,NA18489,NA18877,NA18910,NA19026,NA19037,NA19093,NA19108,NA19129,NA19141,NA19189,NA19204,NA19214,NA19225,NA19319,NA19347,NA19379,NA19380,NA19385,NA19430,NA19446,NA19452,NA19700,NA19835 esv3585253 1 13176833 13182837 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9858890,essv9858889,essv9858888,essv9858887,essv9859001,essv9858895,essv9858893,essv9858892,essv9858891,essv9858894,essv9859000,essv9858896,essv9858999,essv9858934,essv9858901,essv9858897,essv9858900,essv9858899,essv9858898,essv9858903,essv9858916,essv9858907,essv9858933,essv9858902,essv9858906,essv9858905,essv9858904,essv9858910,essv9858915,essv9858909,essv9858908,essv9858911,essv9858914,essv9858913,essv9858912,essv9858923,essv9858918,essv9858932,essv9858917,essv9858922,essv9858919,essv9858920,essv9858921,essv9858924,essv9858931,essv9858926,essv9858925,essv9858927,essv9858930,essv9858929,essv9858928,essv9858939,essv9858948,essv9858936,essv9858935,essv9858938,essv9858998,essv9858937,essv9858965,essv9858947,essv9858940,essv9858942,essv9858941,essv9858946,essv9858943,essv9858945,essv9858944,essv9858950,essv9858955,essv9858949,essv9858964,essv9858954,essv9858951,essv9858952,essv9858953,essv9858963,essv9858958,essv9858957,essv9858956,essv9858959,essv9858962,essv9858960,essv9858961,essv9858980,essv9858971,essv9858997,essv9858970,essv9858967,essv9858966,essv9858969,essv9858968,essv9858974,essv9858979,essv9858973,essv9858972,essv9858978,essv9858975,essv9858977,essv9858976,essv9858982,essv9858981,essv9858987,essv9858996,essv9858983,essv9858986,essv9858985,essv9858984,essv9858995,essv9858990,essv9858989,essv9858988,essv9858994,essv9858991,essv9858993,essv9858992,essv9859012,essv9859256,essv9859127,essv9859029,essv9859062,essv9859002,essv9859011,essv9859003,essv9859010,essv9859009,essv9859005,essv9859004,essv9859008,essv9859006,essv9859007,essv9859019,essv9859014,essv9859028,essv9859013,essv9859018,essv9859015,essv9859017,essv9859016,essv9859022,essv9859027,essv9859021,essv9859020,essv9859026,essv9859023,essv9859025,essv9859024,essv9859035,essv9859030,essv9859044,essv9859061,essv9859034,essv9859031,essv9859033,essv9859032,essv9859038,essv9859036,essv9859043,essv9859037,essv9859042,essv9859039,essv9859041,essv9859040,essv9859046,essv9859051,essv9859045,essv9859060,essv9859050,essv9859047,essv9859049,essv9859048,essv9859059,essv9859054,essv9859053,essv9859052,essv9859055,essv9859058,essv9859057,essv9859056,essv9859067,essv9859076,essv9859093,essv9859066,essv9859063,essv9859126,essv9859064,essv9859065,essv9859070,essv9859075,essv9859069,essv9859068,essv9859074,essv9859071,essv9859073,essv9859072,essv9859083,essv9859078,essv9859092,essv9859077,essv9859082,essv9859079,essv9859081,essv9859080,essv9859086,essv9859091,essv9859085,essv9859084,essv9859087,essv9859090,essv9859089,essv9859088,essv9859099,essv9859125,essv9859108,essv9859098,essv9859095,essv9859094,essv9859097,essv9859096,essv9859107,essv9859102,essv9859101,essv9859100,essv9859106,essv9859103,essv9859105,essv9859104,essv9859124,essv9859115,essv9859110,essv9859109,essv9859114,essv9859111,essv9859113,essv9859112,essv9859123,essv9859118,essv9859117,essv9859116,essv9859122,essv9859119,essv9859121,essv9859120,essv9859131,essv9859190,essv9859140,essv9859157,essv9859130,essv9859255,essv9859129,essv9859128,essv9859134,essv9859139,essv9859133,essv9859132,essv9859135,essv9859138,essv9859137,essv9859136,essv9859142,essv9859156,essv9859147,essv9859141,essv9859146,essv9859143,essv9859145,essv9859144,essv9859148,essv9859155,essv9859150,essv9859149,essv9859151,essv9859154,essv9859153,essv9859152,essv9859163,essv9859158,essv9859172,essv9859189,essv9859162,essv9859159,essv9859160,essv9859161,essv9859166,essv9859171,essv9859165,essv9859164,essv9859167,essv9859170,essv9859169,essv9859168,essv9859188,essv9859179,essv9859174,essv9859173,essv9859178,essv9859175,essv9859177,essv9859176,essv9859182,essv9859187,essv9859181,essv9859180,essv9859183,essv9859186,essv9859185,essv9859184,essv9859195,essv9859221,essv9859204,essv9859254,essv9859194,essv9859191,essv9859192,essv9859193,essv9859203,essv9859198,essv9859197,essv9859196,essv9859202,essv9859199,essv9859201,essv9859200,essv9859211,essv9859206,essv9859220,essv9859205,essv9859210,essv9859207,essv9859209,essv9859208,essv9859214,essv9859219,essv9859213,essv9859212,essv9859218,essv9859215,essv9859217,essv9859216,essv9859227,essv9859253,essv9859236,essv9859226,essv9859223,essv9859222,essv9859225,essv9859224,essv9859230,essv9859235,essv9859229,essv9859228,essv9859234,essv9859231,essv9859233,essv9859232,essv9859252,essv9859243,essv9859238,essv9859237,essv9859242,essv9859239,essv9859241,essv9859240,essv9859246,essv9859251,essv9859245,essv9859244,essv9859247,essv9859250,essv9859249,essv9859248,essv9859258,essv9859268,essv9859257,essv9859267,essv9859262,essv9859261,essv9859260,essv9859259,essv9859266,essv9859263,essv9859265,essv9859264,essv9859270,essv9859275,essv9859269,essv9859271,essv9859274,essv9859273,essv9859272,essv9859276 M 2504 390 0 "" HG00130,HG00146,HG00148,HG00157,HG00183,HG00188,HG00189,HG00238,HG00252,HG00282,HG00285,HG00308,HG00331,HG00334,HG00339,HG00342,HG00351,HG00375,HG00376,HG00406,HG00409,HG00410,HG00422,HG00436,HG00442,HG00446,HG00452,HG00457,HG00458,HG00472,HG00475,HG00476,HG00500,HG00513,HG00525,HG00530,HG00531,HG00543,HG00559,HG00560,HG00566,HG00581,HG00592,HG00593,HG00599,HG00614,HG00620,HG00622,HG00623,HG00626,HG00631,HG00632,HG00634,HG00641,HG00656,HG00662,HG00663,HG00671,HG00675,HG00692,HG00693,HG00699,HG00704,HG00705,HG00707,HG00728,HG00729,HG00766,HG00864,HG00867,HG00879,HG00982,HG01105,HG01130,HG01136,HG01281,HG01351,HG01356,HG01375,HG01447,HG01500,HG01515,HG01596,HG01597,HG01598,HG01600,HG01680,HG01709,HG01710,HG01766,HG01768,HG01783,HG01786,HG01794,HG01795,HG01797,HG01800,HG01801,HG01805,HG01809,HG01812,HG01815,HG01816,HG01840,HG01842,HG01844,HG01846,HG01847,HG01849,HG01850,HG01851,HG01852,HG01853,HG01855,HG01858,HG01860,HG01865,HG01866,HG01867,HG01868,HG01870,HG01872,HG01873,HG01874,HG01879,HG01915,HG01950,HG02012,HG02016,HG02017,HG02019,HG02020,HG02029,HG02032,HG02051,HG02058,HG02067,HG02069,HG02072,HG02073,HG02079,HG02081,HG02082,HG02086,HG02116,HG02121,HG02122,HG02127,HG02128,HG02133,HG02137,HG02138,HG02140,HG02153,HG02154,HG02156,HG02164,HG02165,HG02178,HG02180,HG02181,HG02182,HG02185,HG02187,HG02188,HG02221,HG02250,HG02351,HG02356,HG02360,HG02379,HG02380,HG02391,HG02392,HG02395,HG02397,HG02398,HG02408,HG02409,HG02449,HG02462,HG02491,HG02512,HG02522,HG02537,HG02601,HG02643,HG02661,HG02725,HG02786,HG02840,HG02861,HG02895,HG02982,HG03016,HG03021,HG03055,HG03060,HG03189,HG03195,HG03228,HG03235,HG03240,HG03452,HG03490,HG03491,HG03548,HG03640,HG03667,HG03672,HG03679,HG03680,HG03691,HG03697,HG03705,HG03717,HG03720,HG03738,HG03742,HG03753,HG03760,HG03770,HG03771,HG03773,HG03777,HG03785,HG03787,HG03792,HG03800,HG03857,HG03858,HG03872,HG03884,HG03894,HG03896,HG03916,HG03926,HG03941,HG03953,HG03969,HG03971,HG03973,HG04025,HG04026,HG04039,HG04056,HG04096,HG04146,HG04152,HG04176,HG04182,HG04211,HG04219,NA06989,NA07056,NA11920,NA11930,NA12003,NA12347,NA12761,NA18526,NA18531,NA18534,NA18535,NA18536,NA18539,NA18541,NA18543,NA18550,NA18553,NA18555,NA18557,NA18560,NA18563,NA18564,NA18565,NA18566,NA18570,NA18573,NA18574,NA18577,NA18579,NA18592,NA18596,NA18602,NA18603,NA18606,NA18609,NA18610,NA18612,NA18616,NA18617,NA18619,NA18621,NA18622,NA18623,NA18624,NA18625,NA18626,NA18628,NA18629,NA18631,NA18635,NA18636,NA18638,NA18639,NA18642,NA18644,NA18645,NA18647,NA18740,NA18745,NA18748,NA18940,NA18941,NA18946,NA18947,NA18950,NA18952,NA18957,NA18961,NA18964,NA18969,NA18971,NA18972,NA18977,NA18978,NA18982,NA18984,NA18990,NA18994,NA18995,NA18998,NA19000,NA19001,NA19002,NA19005,NA19056,NA19058,NA19059,NA19065,NA19067,NA19075,NA19076,NA19079,NA19080,NA19083,NA19084,NA19085,NA19088,NA19089,NA19090,NA19091,NA19096,NA19190,NA19307,NA19321,NA19438,NA19466,NA19684,NA19779,NA19789,NA19923,NA20513,NA20542,NA20760,NA20801,NA20802,NA20818,NA20851,NA20852,NA20853,NA20856,NA20861,NA20877,NA20878,NA20895,NA20896,NA20906,NA21088,NA21093,NA21099,NA21102,NA21113,NA21115,NA21122,NA21128,NA21129,NA21130,NA21137 nsv1075775 1 13178099 13183600 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3763367 M 1 1 0 HNRNPCP5 KWP1 esv3577740 1 13178372 13186871 CNV loss Uddin_et_al_2014 25503493 SNP array essv9797532 M 873 0 1 HNRNPCP5 401623SN nsv1005416 1 13178373 13444670 CNV loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3473590 M 29084 0 1 HNRNPCP5,PRAMEF15,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 dgv137n54 1 13178497 13219371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545545,nsv545544 M 17421 0 2 HNRNPCP5 esv2743964 1 13178707 13187803 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6669177,essv6906094,essv6917419,essv6682822,essv6682823,essv6902526,essv6950185,essv6906095,essv6877662,essv6759038,essv6933299,essv6797445,essv6824977,essv6709708,essv6824978,essv6843809,essv6821178,essv6689255,essv6742135,essv6913995,essv6797444,essv6679163,essv6836182,essv6753491,essv6729614,essv6807372,essv6807371,essv6718162,essv6784543,essv6885979,essv6885980,essv6859184,essv6764157,essv6859185,essv6839967,essv6714239,essv6748298,essv6689253,essv6686150,essv6889003,essv6972334,essv6692756,essv6916651,essv6725847,essv6889002,essv6725846,essv6707261,essv6843880,essv6853232,essv6735974,essv6880415,essv6880416,essv6921712,essv6937674,essv6761849,essv6868706,essv6868707,essv6910036,essv6668945,essv6784990,essv6669188,essv6750592,essv6789145,essv6696986,essv6871710,essv6703859,essv6747773,essv6793279,essv6695632,essv6847011,essv6722002,essv6946491,essv6876754,essv6874700,essv6863954,essv6946490,essv6847010,essv6801614 M 96 0 63 HNRNPCP5 SSM001,SSM003,SSM004,SSM005,SSM006,SSM008,SSM009,SSM011,SSM012,SSM013,SSM014,SSM015,SSM016,SSM017,SSM018,SSM021,SSM022,SSM024,SSM029,SSM031,SSM033,SSM034,SSM035,SSM036,SSM037,SSM038,SSM040,SSM041,SSM043,SSM044,SSM045,SSM046,SSM047,SSM050,SSM053,SSM056,SSM057,SSM058,SSM061,SSM062,SSM063,SSM069,SSM070,SSM071,SSM072,SSM073,SSM075,SSM079,SSM080,SSM083,SSM084,SSM085,SSM086,SSM087,SSM088,SSM089,SSM090,SSM091,SSM092,SSM093,SSM094,SSM096,SSM097 esv8453 1 13178721 13187916 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30894 M 1 0 0 HNRNPCP5 esv3585255 1 13178772 13187474 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9859514,essv9859513,essv9859512,essv9859511,essv9859510,essv9859509,essv9859508,essv9859507,essv9859506,essv9859517,essv9859518,essv9859515,essv9859516,essv9859539,essv9859522,essv9859521,essv9859520,essv9859519,essv9859524,essv9859529,essv9859523,essv9859538,essv9859525,essv9859528,essv9859527,essv9859526,essv9859532,essv9859537,essv9859531,essv9859530,essv9859533,essv9859536,essv9859535,essv9859534,essv9859545,essv9859542,essv9859541,essv9859540,essv9859544,essv9859543 M 2504 0 40 HNRNPCP5 HG00118,HG00421,HG00478,HG01808,HG01986,HG02318,HG02325,HG02332,HG02419,HG02728,HG02771,HG02882,HG03040,HG03073,HG03077,HG03078,HG03081,HG03114,HG03247,HG03460,HG03514,HG03567,HG03663,HG03756,NA12815,NA18489,NA18877,NA18910,NA19026,NA19037,NA19093,NA19108,NA19189,NA19204,NA19214,NA19225,NA19347,NA19446,NA19700,NA19835 nsv1122300 1 13178772 13187493 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967969,nssv3985266 M 2 0 2 HNRNPCP5 KWS1,KWS2 esv2675846 1 13178772 13187516 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6451370,essv5831266,essv6508438,essv5492472,essv6212375,essv5583076,essv6192563,essv5829847,essv6316601,essv5550447,essv6220028,essv6055049,essv6552450,essv5598686 M 1151 0 14 HNRNPCP5 HG00537,NA07357,NA10851,NA11918,NA18489,NA18593,NA19093,NA19099,NA19108,NA19147,NA19225,NA19835,NA20522,NA20529 esv2743975 1 13181668 13201143 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6889004 M 96 0 1 HNRNPCP5 SSM097 nsv1150505 1 13181999 13199200 CNV duplication John_et_al_2014 26484159 Sequencing nssv3995980 M 1 1 0 HNRNPCP5 KWB1 esv3416903 1 13182365 13182763 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691778 M 185 1 0 "" NA12878 esv3585256 1 13182563 13196202 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9859572,essv9859571,essv9859554,essv9859546,essv9859553,essv9859548,essv9859547,essv9859549,essv9859552,essv9859551,essv9859550,essv9859556,essv9859570,essv9859561,essv9859555,essv9859560,essv9859557,essv9859559,essv9859558,essv9859564,essv9859569,essv9859563,essv9859562,essv9859568,essv9859565,essv9859567,essv9859566,essv9859586,essv9859577,essv9859576,essv9859573,essv9859603,essv9859575,essv9859574,essv9859580,essv9859585,essv9859579,essv9859578,essv9859581,essv9859584,essv9859583,essv9859582,essv9859588,essv9859602,essv9859593,essv9859587,essv9859592,essv9859589,essv9859591,essv9859590,essv9859596,essv9859601,essv9859595,essv9859594,essv9859597,essv9859600,essv9859599,essv9859598,essv9859604,essv9859609,essv9859608,essv9859605,essv9859607,essv9859606 M 2504 0 64 HNRNPCP5 HG00118,HG00421,HG00478,HG00537,HG01190,HG01785,HG01808,HG01986,HG02152,HG02325,HG02332,HG02339,HG02419,HG02728,HG02771,HG02839,HG02851,HG02881,HG02882,HG02922,HG03040,HG03073,HG03077,HG03078,HG03081,HG03114,HG03247,HG03291,HG03313,HG03352,HG03354,HG03380,HG03457,HG03460,HG03514,HG03567,HG03663,HG03756,HG04002,HG04018,HG04225,NA12287,NA12815,NA18489,NA18877,NA18910,NA19026,NA19037,NA19093,NA19108,NA19141,NA19189,NA19204,NA19214,NA19225,NA19347,NA19378,NA19385,NA19430,NA19446,NA19452,NA19700,NA19835,NA20281 esv3585257 1 13182563 13196202 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9859618,essv9859612,essv9859617,essv9859611,essv9859610,essv9859616,essv9859613,essv9859615,essv9859614,essv9859619,essv9859625,essv9859620,essv9859624,essv9859621,essv9859623,essv9859622,essv9859626 M 2504 17 0 HNRNPCP5 HG01709,HG01801,HG01865,HG02408,HG02537,HG03021,HG03228,HG03693,HG03760,HG03823,HG03941,HG03971,NA18542,NA19307,NA19321,NA19438,NA19466 nsv1004373 1 13185726 13471933 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3698784 M 29084 1 0 PRAMEF13,PRAMEF15,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 esv3430112 1 13186365 13188063 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691779 M 185 1 0 "" NA12878 nsv1075776 1 13199499 13204600 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3771045 M 1 1 0 "" KWP1 nsv1149698 1 13199599 13205800 CNV duplication John_et_al_2014 26484159 Sequencing nssv4000997 M 1 1 0 "" KWB1 nsv1153647 1 13207099 13219900 CNV duplication John_et_al_2014 26484159 Sequencing nssv4002298 M 1 1 0 "" KWB1 nsv1124561 1 13207200 13219700 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976615 M 2 1 0 "" KWS2 nsv953505 1 13209901 13219900 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001878 M 1 1 0 "" BILGI_BIOE nsv1075365 1 13211499 13213200 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3770942 M 1 1 0 "" KWP1 esv987716 1 13211906 13219912 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586238 M 3 1 0 "" HuRef esv3397866 1 13216065 13219763 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691780 M 185 1 0 "" NA12878 nsv1076316 1 13216299 13219900 CNV duplication Thareja_et_al_2015 25765185 Sequencing nssv3770054 M 1 1 0 "" KWP1 nsv545546 1 13320001 13323364 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710223 M 17421 0 1 "" dgv138n54 1 13320001 13324817 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545557,nsv545548,nsv545555,nsv545549,nsv545547,nsv545553 M 17421 0 11 "" dgv139n54 1 13320001 13326064 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545558,nsv545550 M 17421 3 0 "" dgv140n54 1 13320001 13326401 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545551,nsv545554,nsv545556 M 17421 0 3 "" esv1000242 1 13320001 13368854 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586500 M 3 1 0 PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6 HuRef esv25471 1 13320047 13499446 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12571,esv18416,esv18444,esv10590,esv16485,esv12877,esv12763,esv17976,esv15096,esv17726,esv17055,esv20457 M 40 34 11 PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18502,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv545552 1 13320359 13324097 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710236,nssv710234,nssv710235,nssv710237 M 17421 1 3 "" nsv1075590 1 13326099 13374900 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3772153 M 1 0 1 PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6 KWP1 nsv953507 1 13326101 13336400 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001900 M 1 0 1 PRAMEF22,PRAMEF3 BILGI_BIOE nsv945778 1 13327331 13389874 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752501,nssv1752450,nssv1752425,nssv1752480,nssv1752431,nssv1752454,nssv1752423,nssv1752448,nssv1752505,nssv1752513,nssv1752507,nssv1752440,nssv1752449,nssv1752473,nssv1752427,nssv1752479,nssv1752417,nssv1752467,nssv1752416,nssv1752515,nssv1752430,nssv1752489,nssv1752447,nssv1752472,nssv1752437,nssv1752442,nssv1752436,nssv1752493,nssv1752429,nssv1752519,nssv1752503,nssv1752487,nssv1752502,nssv1752498,nssv1752418,nssv1752460,nssv1752426,nssv1752482,nssv1752439,nssv1752514,nssv1752438,nssv1752457,nssv1752500,nssv1752511,nssv1752421,nssv1752483,nssv1752441,nssv1752462,nssv1752504,nssv1752459,nssv1752419,nssv1752471,nssv1752420,nssv1752445,nssv1752506,nssv1752453,nssv1752432,nssv1752516,nssv1752428,nssv1752520,nssv1752508,nssv1752443,nssv1752424,nssv1752495,nssv1752509,nssv1752478,nssv1752446,nssv1752458,nssv1752435,nssv1752474,nssv1752434,nssv1752476,nssv1752463,nssv1752465,nssv1752451,nssv1752492,nssv1752496,nssv1752490,nssv1752491,nssv1752485,nssv1752494,nssv1752469,nssv1752456,nssv1752464,nssv1752481,nssv1752461,nssv1752512,nssv1752518,nssv1752497,nssv1752475,nssv1752517,nssv1752470,nssv1752486,nssv1752415,nssv1752468,nssv1752452,nssv1752484 M 97 10 0 PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832981 1 13330166 13517412 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442807 M 95 0 1 PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF22,PRAMEF23,PRAMEF3,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 nsv1130946 1 13339000 13339600 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967643 M 2 0 1 "" KWS2 nsv511155 1 13340066 13345819 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626055 M 1 0 1 "" 1 nsv545559 1 13341911 13345565 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710245 M 17421 0 1 "" nsv472969 1 13342835 13342835 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012443 M 9 1 0 "" NA19129 nsv821207 1 13347012 13429392 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420225 M 1 0 1 PRAMEF15,PRAMEF23,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA10851 nsv953508 1 13347401 13379800 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001911 M 1 0 1 PRAMEF23,PRAMEF5,PRAMEF6 BILGI_BIOE esv2743986 1 13353537 13497497 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6917421,essv6742136,essv6816577,essv6800932,essv6784554,essv6748309,essv6853233 M 96 0 7 PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF23,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 SSM002,SSM008,SSM009,SSM017,SSM053,SSM078,SSM087 nsv1136064 1 13354100 13357800 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3989670 M 2 0 1 "" KWS2 esv2665484 1 13368345 13375092 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5773314,essv6475366,essv5863970,essv6288394,essv5494076,essv6225081,essv5435009,essv6410534,essv5497301,essv6560799,essv5573162,essv6431464,essv5820341,essv6436500,essv5652728,essv6444431,essv5460337,essv6525145,essv5716590,essv6282087,essv5615380,essv6122402,essv5815259,essv6092066,essv5463844,essv6591719,essv5430477,essv5921103,essv5703881,essv6514155,essv5696953,essv5968831,essv5555972,essv5941913,essv5775135,essv5901173,essv5430621,essv6096804,essv5518347,essv6168348,essv5452069,essv6333942,essv5525648,essv5974248,essv5591357,essv5893957,essv5650208,essv6344402,essv5691512,essv6004250,essv5882418,essv5959523,essv5444057,essv6020722,essv5833750,essv6087877,essv5805042,essv6365909,essv5783116,essv6461686,essv5522244,essv6138136,essv5691405,essv5925897,essv5506822 M 1151 0 65 PRAMEF23,PRAMEF5,PRAMEF6 NA06984,NA06986,NA06989,NA06994,NA07037,NA07048,NA07056,NA07346,NA07347,NA07357,NA10851,NA11829,NA11830,NA11831,NA11832,NA11843,NA11881,NA11892,NA11893,NA11894,NA11919,NA11920,NA11930,NA11931,NA11932,NA11933,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12006,NA12043,NA12044,NA12045,NA12046,NA12058,NA12144,NA12154,NA12155,NA12156,NA12272,NA12273,NA12275,NA12286,NA12287,NA12340,NA12341,NA12347,NA12348,NA12383,NA12399,NA12413,NA12546,NA12716,NA12717,NA12750,NA12751,NA12761,NA12763,NA12776,NA12778,NA12813,NA12828 dgv40n106 1 13368500 13374400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1142746,nsv1121751 M 2 0 2 PRAMEF23,PRAMEF5,PRAMEF6 KWS1,KWS2 nsv1008245 1 13375333 13471933 CNV gain+loss Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3464507,nssv3477492,nssv3698785,nssv3467514,nssv3470021,nssv3470297 M 29084 1 5 PRAMEF13,PRAMEF15,PRAMEF7,PRAMEF8,PRAMEF9 nsv998907 1 13375333 13804575 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nssv3479561 M 29084 1 0 LRRC38,PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 esv2762131 1 13375345 13377047 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005005 M 1109 0 1 "" RW_0543 nsv1075595 1 13384199 13417700 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769560 M 1 0 1 PRAMEF7,PRAMEF8 KWP1 nsv953509 1 13384301 13443700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003030 M 1 0 1 PRAMEF15,PRAMEF7,PRAMEF8,PRAMEF9 BILGI_BIOE dgv41n106 1 13388600 13418000 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1112522,nsv1142747 M 2 0 2 PRAMEF7,PRAMEF8 KWS1,KWS2 nsv945779 1 13389874 13390374 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752523,nssv1753502,nssv1752533,nssv1752564,nssv1752529,nssv1753508,nssv1752534,nssv1753495,nssv1752553,nssv1752559,nssv1753530,nssv1753496,nssv1752542,nssv1752562,nssv1753523,nssv1753499,nssv1753524,nssv1753514,nssv1752544,nssv1752547,nssv1752537,nssv1753512,nssv1752556,nssv1753520,nssv1753528,nssv1753515,nssv1753532,nssv1752555,nssv1753526,nssv1752561,nssv1752535,nssv1752522,nssv1752552,nssv1753516,nssv1753529,nssv1753521,nssv1752524,nssv1753509,nssv1752546,nssv1753519,nssv1753531,nssv1753505,nssv1752548,nssv1752566,nssv1752539,nssv1753492,nssv1752527,nssv1753497,nssv1752538,nssv1752567,nssv1752528,nssv1753501,nssv1752526,nssv1752549,nssv1753527,nssv1753494,nssv1752536,nssv1753504,nssv1752531,nssv1753498,nssv1753525,nssv1752560,nssv1752530,nssv1752551,nssv1752525,nssv1753513,nssv1752545,nssv1752550,nssv1752541,nssv1753507,nssv1752540,nssv1753518,nssv1753510,nssv1752557,nssv1753503,nssv1753493,nssv1753517,nssv1752563,nssv1753506,nssv1752558 M 97 10 0 PRAMEF7,PRAMEF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945780 1 13390374 13528289 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753548,nssv1752852,nssv1753619,nssv1753581,nssv1753545,nssv1753601,nssv1753535,nssv1753585,nssv1753557,nssv1753576,nssv1753549,nssv1753615,nssv1752845,nssv1753590,nssv1753552,nssv1753586,nssv1753618,nssv1752856,nssv1753546,nssv1753596,nssv1753550,nssv1753594,nssv1753553,nssv1752854,nssv1753620,nssv1753611,nssv1752843,nssv1752848,nssv1753556,nssv1753559,nssv1753565,nssv1753614,nssv1753537,nssv1753571,nssv1753554,nssv1753587,nssv1753568,nssv1752850,nssv1753536,nssv1753616,nssv1753622,nssv1753574,nssv1753543,nssv1753561,nssv1753538,nssv1753613,nssv1753541,nssv1753583,nssv1753540,nssv1753584,nssv1753564,nssv1753570,nssv1753547,nssv1753563,nssv1752842,nssv1753578,nssv1753551,nssv1752857,nssv1753539,nssv1753567,nssv1752844,nssv1753597,nssv1753560,nssv1753607,nssv1753558,nssv1753569,nssv1753542,nssv1753575,nssv1752846,nssv1752853,nssv1752847,nssv1753609,nssv1753604,nssv1753608,nssv1753579,nssv1753605,nssv1753603,nssv1753593,nssv1753612,nssv1753572,nssv1753534,nssv1753573,nssv1753591,nssv1753602,nssv1753595,nssv1753592,nssv1753600,nssv1752849,nssv1752851,nssv1753562,nssv1752855,nssv1753580,nssv1753606,nssv1753589,nssv1753617,nssv1753598,nssv1753582 M 97 10 0 PRAMEF13,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1001235 1 13417051 13475340 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586342 M 3 1 0 PRAMEF13,PRAMEF15,PRAMEF18,PRAMEF19,PRAMEF9 HuRef nsv945566 1 13417179 13420448 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572736,nssv2572766,nssv2572735,nssv2572787,nssv2572807,nssv2572785,nssv2572751,nssv2572802,nssv2572749,nssv2572779,nssv2572805,nssv2572789,nssv2572755,nssv2572801,nssv2572745,nssv2572794,nssv2572762,nssv2572795,nssv2572763,nssv2572792,nssv2572809,nssv2572775,nssv2572752,nssv2572768,nssv2572808,nssv2572757,nssv2572758,nssv2572772,nssv2572737,nssv2572773,nssv2572744,nssv2572777,nssv2572810,nssv2572781,nssv2572743,nssv2572791,nssv2572742,nssv2572803,nssv2572739,nssv2572796,nssv2572806,nssv2572799,nssv2572747,nssv2572797,nssv2572740,nssv2572788,nssv2572756,nssv2572776,nssv2572734,nssv2572760,nssv2572748,nssv2572778,nssv2572812,nssv2572784,nssv2572804,nssv2572769,nssv2572753,nssv2572790,nssv2572741,nssv2572793,nssv2572811,nssv2572764,nssv2572765,nssv2572733,nssv2572754,nssv2572780,nssv2572813,nssv2572783,nssv2572750,nssv2572771,nssv2572746,nssv2572800,nssv2572759,nssv2572786,nssv2572774,nssv2572782,nssv2572767,nssv2572770,nssv2572761,nssv2572798 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3417900 1 13423365 13424663 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691781 M 185 1 0 PRAMEF15,PRAMEF9 NA12878 dgv42n106 1 13425400 13434900 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1142748,nsv1112523 M 2 0 2 PRAMEF15,PRAMEF9 KWS1,KWS2 nsv1076124 1 13426799 13437900 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3770046 M 1 0 1 PRAMEF15,PRAMEF9 KWP1 nsv1139473 1 13442200 13472700 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3977060 M 2 1 0 PRAMEF13 KWS2 nsv953510 1 13443701 13472700 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003041 M 1 1 0 PRAMEF13 BILGI_BIOE nsv1161189 1 13444682 13471704 OTHER complex Lou_et_al_2015 26073780 Sequencing,SNP array nssv4029517,nssv4029547 M 369 1 1 PRAMEF13 nsv442562 1 13444908 13468022 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617366,nssv1617381,nssv1617373,nssv1617364,nssv1617398,nssv1617365,nssv1617362,nssv1617374,nssv1617396,nssv1617393,nssv1617397,nssv1617388,nssv1617390,nssv1617359,nssv1617363,nssv1617367,nssv1617335,nssv1617386,nssv1617356,nssv1617377,nssv1617376,nssv1617382,nssv1617370,nssv1617360,nssv1617394,nssv1617389,nssv1617355,nssv1617324,nssv1617372,nssv1617395,nssv1617346,nssv1617385,nssv1617371,nssv1617361,nssv1617383,nssv1617401,nssv1617379,nssv1617375,nssv1617384,nssv1617387,nssv1617378,nssv1617368,nssv1617357,nssv1617399,nssv1617400 M 270 4 41 PRAMEF13 NA07019,NA07022,NA07056,NA10847,NA12003,NA12004,NA12239,NA18526,NA18529,NA18540,NA18542,NA18550,NA18555,NA18563,NA18564,NA18566,NA18570,NA18573,NA18577,NA18579,NA18592,NA18603,NA18612,NA18621,NA18622,NA18624,NA18633,NA18635,NA18636,NA18637,NA18940,NA18947,NA18948,NA18952,NA18964,NA18969,NA18971,NA18978,NA18990,NA18992,NA18995,NA18998,NA19005,NA19119,NA19120 nsv1151073 1 13445499 13447000 CNV duplication John_et_al_2014 26484159 Sequencing nssv4002007 M 1 1 0 "" KWB1 nsv1149900 1 13450499 13472300 CNV duplication John_et_al_2014 26484159 Sequencing nssv3998687 M 1 1 0 PRAMEF13 KWB1 esv1751185 1 13468489 13468542 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3633436 M 2 0 1 "" HuRef nsv1077081 1 13472099 13555500 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3768319 M 1 0 1 PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21 KWP1 dgv43n106 1 13472300 13638500 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1112524,nsv1143437 M 2 0 2 PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8 KWS1,KWS2 nsv953511 1 13472701 13658700 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003053 M 1 0 1 PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 BILGI_BIOE nsv545560 1 13489811 13490061 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710246 M 17421 0 1 "" nsv8879 1 13520038 13532399 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28030 M 31 1 0 PRAMEF20,PRAMEF21 NA10847 nsv8991 1 13546805 13749786 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv12759,nssv15094,nssv13082,nssv28534,nssv13095,nssv12432,nssv15119,nssv12774,nssv15108,nssv12100,nssv14743,nssv12423,nssv12430,nssv13427,nssv12760,nssv28925,nssv29273,nssv12436,nssv11788,nssv11786,nssv14413,nssv12106,nssv14734,nssv13759,nssv12104,nssv12756,nssv14419,nssv12771,nssv14404,nssv13101,nssv14759,nssv13758,nssv12110,nssv13111,nssv12114,nssv12431,nssv12102,nssv12434,nssv12781,nssv13425,nssv13097,nssv28942,nssv14418,nssv14088,nssv28924,nssv12451,nssv11787,nssv13440,nssv12764,nssv11784,nssv28537,nssv14748,nssv13110,nssv12442,nssv15443,nssv13757,nssv13412,nssv29272,nssv14087,nssv15773,nssv28536,nssv14089,nssv16103,nssv12444,nssv16433,nssv13094,nssv13755 M 31 30 7 PRAMEF15,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv508137 1 13551291 13772150 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv618967 M 4 0 1 PRAMEF15,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF7,PRAMEF8,PRAMEF9 NA10860 esv24967 1 13553987 13556868 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20195,esv13012 M 40 2 0 "" NA12878,NA18907 nsv945782 1 13607163 13613468 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752868,nssv1753809,nssv1753861,nssv1753815,nssv1752859,nssv1753857,nssv1752875,nssv1753873,nssv1753804,nssv1753821,nssv1752865,nssv1753807,nssv1753868,nssv1753848,nssv1753865,nssv1753845,nssv1753803,nssv1753817,nssv1753866,nssv1753858,nssv1753811,nssv1753850,nssv1752867,nssv1753841,nssv1753800,nssv1753874,nssv1753801,nssv1753828,nssv1753864,nssv1753876,nssv1753862,nssv1753814,nssv1752873,nssv1753831,nssv1753813,nssv1753838,nssv1753802,nssv1753852,nssv1752870,nssv1752858,nssv1753859,nssv1753830,nssv1752872,nssv1753808,nssv1753867,nssv1753818,nssv1752860,nssv1753822,nssv1753860,nssv1753834,nssv1752861,nssv1753844,nssv1752869,nssv1753853,nssv1753810,nssv1753877,nssv1752863,nssv1753842,nssv1752874,nssv1753827,nssv1752862,nssv1753836,nssv1753863,nssv1753846,nssv1752864,nssv1753870,nssv1752866,nssv1753869,nssv1752871,nssv1753833,nssv1753806,nssv1753878,nssv1753851,nssv1753856,nssv1753823,nssv1753854,nssv1753812,nssv1753820,nssv1753816,nssv1753819,nssv1753826,nssv1753872,nssv1753832,nssv1753824,nssv1753855,nssv1753843,nssv1753837,nssv1753840,nssv1753835,nssv1753871,nssv1753805,nssv1753847,nssv1753829,nssv1753849,nssv1753839,nssv1753875,nssv1753825 M 97 10 0 PRAMEF7,PRAMEF8 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv820708 1 13607202 13653136 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420236 M 1 0 1 PRAMEF15,PRAMEF7,PRAMEF8,PRAMEF9 NA10851 esv29915 1 13607202 13723120 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16637,esv15458,esv16388,esv14244,esv11807,esv10843 M 40 34 5 PRAMEF15,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF7,PRAMEF8,PRAMEF9 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18502,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 dgv141n54 1 13607252 13674919 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545562,nsv545563,nsv545561 M 17421 0 3 PRAMEF15,PRAMEF7,PRAMEF8,PRAMEF9 nsv545564 1 13612734 13706913 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710250 M 17421 0 1 PRAMEF15,PRAMEF18,PRAMEF19,PRAMEF9 nsv945784 1 13613468 13616800 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753896,nssv1753947,nssv1753951,nssv1753920,nssv1753884,nssv1753923,nssv1753880,nssv1753942,nssv1753887,nssv1753934,nssv1753910,nssv1753948,nssv1753882,nssv1753917,nssv1753900,nssv1753936,nssv1753893,nssv1753922,nssv1753958,nssv1753926,nssv1753894,nssv1753902,nssv1753950,nssv1753944,nssv1753908,nssv1753911,nssv1753955,nssv1753935,nssv1753897,nssv1753928,nssv1753885,nssv1753945,nssv1753954,nssv1753938,nssv1753901,nssv1753904,nssv1753889,nssv1753924,nssv1753898,nssv1753930,nssv1753952,nssv1753925,nssv1753949,nssv1753906,nssv1753891,nssv1753914,nssv1753956,nssv1753943,nssv1753881,nssv1753929,nssv1753892,nssv1753879,nssv1753899,nssv1753932,nssv1753907,nssv1753905,nssv1753888,nssv1753941,nssv1753957,nssv1753909,nssv1753890,nssv1753931,nssv1753886,nssv1753933,nssv1753953,nssv1753939,nssv1753895,nssv1753913,nssv1753883,nssv1753918,nssv1753903,nssv1753915,nssv1753927,nssv1753940,nssv1753912,nssv1753916,nssv1753937,nssv1753919,nssv1753946,nssv1753921 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545565 1 13616912 13639722 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710251 M 17421 0 1 "" nsv545566 1 13626760 13671049 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710252 M 17421 0 1 PRAMEF15,PRAMEF9 nsv945785 1 13627126 13749126 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753977,nssv1754024,nssv1753987,nssv1754020,nssv1754041,nssv1753999,nssv1754043,nssv1754032,nssv1754038,nssv1753996,nssv1754045,nssv1754055,nssv1753965,nssv1754017,nssv1753961,nssv1754026,nssv1753960,nssv1753984,nssv1754042,nssv1753993,nssv1753963,nssv1753998,nssv1753971,nssv1753997,nssv1753980,nssv1754009,nssv1753976,nssv1754014,nssv1753973,nssv1754048,nssv1753962,nssv1753992,nssv1754037,nssv1753982,nssv1753969,nssv1754031,nssv1753978,nssv1754029,nssv1753981,nssv1754034,nssv1753990,nssv1754028,nssv1753968,nssv1754003,nssv1753970,nssv1754006,nssv1754044,nssv1754012,nssv1753979,nssv1754000,nssv1754039,nssv1754053,nssv1753974,nssv1754016,nssv1753988,nssv1754001,nssv1753964,nssv1754025,nssv1753972,nssv1754050,nssv1753967,nssv1754022,nssv1754036,nssv1754027,nssv1754040,nssv1754015,nssv1753966,nssv1754051,nssv1753975,nssv1754018,nssv1753983,nssv1754008,nssv1753991,nssv1754002,nssv1754011,nssv1754010,nssv1754019,nssv1754052,nssv1754047,nssv1754007,nssv1753985,nssv1754005,nssv1754030,nssv1753994,nssv1754035,nssv1753989,nssv1754054,nssv1754021,nssv1753995,nssv1754046,nssv1754004,nssv1753986,nssv1754023,nssv1754033,nssv1753959,nssv1754013,nssv1754049 M 97 10 0 PRAMEF15,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21,PRAMEF9 HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv987523 1 13636959 13696564 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586687 M 3 1 0 PRAMEF15,PRAMEF18,PRAMEF19,PRAMEF9 HuRef nsv945568 1 13638007 13641276 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2568948,nssv2568924,nssv2572817,nssv2568923,nssv2568875,nssv2568937,nssv2568873,nssv2568915,nssv2568946,nssv2568898,nssv2568881,nssv2568934,nssv2568943,nssv2568902,nssv2568869,nssv2568906,nssv2568882,nssv2568901,nssv2568894,nssv2568903,nssv2568939,nssv2568938,nssv2572816,nssv2568897,nssv2568877,nssv2568905,nssv2568884,nssv2568914,nssv2568879,nssv2568930,nssv2568870,nssv2568921,nssv2568942,nssv2568917,nssv2568880,nssv2568935,nssv2572818,nssv2568927,nssv2568893,nssv2568920,nssv2568883,nssv2568904,nssv2572819,nssv2568912,nssv2568945,nssv2568936,nssv2568874,nssv2568907,nssv2568886,nssv2568918,nssv2568885,nssv2568932,nssv2568871,nssv2568928,nssv2568876,nssv2568909,nssv2568896,nssv2568891,nssv2572815,nssv2568916,nssv2568947,nssv2568931,nssv2568941,nssv2568895,nssv2568888,nssv2568892,nssv2568872,nssv2568887,nssv2568949,nssv2568890,nssv2568940,nssv2568908,nssv2568925,nssv2568910,nssv2568926,nssv2568899,nssv2568913,nssv2568919,nssv2568929,nssv2572814 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1075188 1 13646199 13658900 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769141 M 1 0 1 PRAMEF15,PRAMEF9 KWP1 nsv1112525 1 13646200 13653400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3980636,nssv3966625 M 2 0 2 PRAMEF15,PRAMEF9 KWS1,KWS2 nsv1141130 1 13669200 13692100 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3992637 M 2 1 0 "" KWS2 nsv953512 1 13672401 13693800 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003064 M 1 1 0 "" BILGI_BIOE nsv1148774 1 13683899 13693100 CNV duplication John_et_al_2014 26484159 Sequencing nssv3997561 M 1 1 0 "" KWB1 esv3365276 1 13683965 13686863 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691782 M 185 1 0 "" NA12878 esv3430097 1 13687565 13689863 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691783 M 185 1 0 "" NA12891 dgv16e199 1 13692845 13774592 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2677250,esv2660387 M 1151 0 374 PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21 HG00403,HG00404,HG00418,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00556,HG00557,HG00559,HG00560,HG00565,HG00566,HG00577,HG00578,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00593,HG00595,HG00596,HG00607,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00620,HG00625,HG00626,HG00628,HG00629,HG00634,HG00635,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708,NA19311,NA19312,NA19313,NA19315,NA19316,NA19317,NA19318,NA19319,NA19321,NA19324,NA19327,NA19328,NA19331,NA19332,NA19334,NA19338,NA19346,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19399,NA19401,NA19403,NA19404,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19453,NA19455,NA19456,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19469,NA19470,NA19471,NA19472,NA19473,NA19474,NA19625,NA19648,NA19651,NA19652,NA19654,NA19655,NA19657,NA19660,NA19661,NA19663,NA19664,NA19675,NA19676,NA19678,NA19679,NA19681,NA19682,NA19684,NA19685,NA19700,NA19701,NA19703,NA19704,NA19707,NA19711,NA19712,NA19713,NA19716,NA19717,NA19719,NA19720,NA19722,NA19723,NA19725,NA19726,NA19728,NA19729,NA19731,NA19732,NA19746,NA19747,NA19749,NA19750,NA19755,NA19756,NA19758,NA19759,NA19761,NA19762,NA19770,NA19771,NA19773,NA19774,NA19776,NA19777,NA19779,NA19780,NA19782,NA19783,NA19785,NA19786,NA19788,NA19789,NA19818,NA19819,NA19834,NA19835,NA19901,NA19904,NA19908,NA19914,NA19916,NA19917,NA19920,NA19921,NA19982,NA19985,NA20126,NA20127,NA20276,NA20278,NA20281,NA20282,NA20287,NA20289,NA20291,NA20294,NA20296,NA20299,NA20314,NA20317,NA20322,NA20332,NA20334,NA20336,NA20340,NA20341,NA20342,NA20344,NA20346,NA20348,NA20356,NA20502,NA20503,NA20504,NA20505,NA20506,NA20507,NA20508,NA20509,NA20510,NA20512,NA20513,NA20514,NA20515,NA20516,NA20517,NA20518,NA20519,NA20520,NA20522,NA20524,NA20525,NA20526,NA20527,NA20528,NA20529,NA20530,NA20531,NA20532,NA20533,NA20534,NA20535,NA20536,NA20537,NA20538,NA20539,NA20540,NA20541,NA20542,NA20543,NA20544,NA20582,NA20585,NA20586,NA20588,NA20589,NA20752,NA20753,NA20754,NA20755,NA20756,NA20757,NA20758,NA20759,NA20760,NA20761,NA20765,NA20766,NA20768,NA20769,NA20770,NA20771,NA20772,NA20773,NA20774,NA20775,NA20778,NA20783,NA20785,NA20786,NA20787,NA20790,NA20792,NA20795,NA20796,NA20797,NA20798,NA20799,NA20800,NA20801,NA20802,NA20803,NA20804,NA20806,NA20807,NA20808,NA20809,NA20810,NA20811,NA20812,NA20813,NA20814,NA20815,NA20816,NA20818,NA20819,NA20826,NA20828 nsv1075191 1 13693099 13773800 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3770663 M 1 0 1 PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21 KWP1 dgv44n106 1 13693200 13781400 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nsv1118102,nsv1130949 M 2 0 2 PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21 KWS1,KWS2 nsv1121752 1 13693800 13695600 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3968401 M 2 0 1 PRAMEF18,PRAMEF19 KWS2 nsv953522 1 13693801 13772500 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003075 M 1 0 1 PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF20,PRAMEF21 BILGI_BIOE nsv9102 1 13762482 13782195 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv12762,nssv13431,nssv13441,nssv15449,nssv13770 M 31 1 4 "" NA18502,NA18860,NA19173,NA19221,NA19240 esv3891970 1 13764823 13830577 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25780939 M 3017 0 1 LRRC38 esv27160 1 13774084 13777459 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17463 M 40 0 4 "" NA18523,NA18858,NA19240,NA19257 nsv829503 1 13774117 13774919 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1425488 M 31 1 0 "" AK4 esv2421816 1 13775026 13776828 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5129509,essv5122714,essv5030554,essv5159320,essv5014986,essv5054861,essv5052409,essv5124207,essv5088842,essv5140759,essv5119368,essv5119113,essv5104141,essv5008201,essv5152549,essv5054130,essv5040208,essv5113057,essv5055935,essv5115047,essv5136291,essv5081621,essv5074912,essv5156754,essv5112792,essv5003662,essv5119297,essv5149288,essv5133703,essv5057582,essv5037812,essv5012309,essv5153639,essv5085452,essv5103764,essv5160977,essv5101761,essv5078655,essv5059200,essv5089793,essv5113322,essv5115799,essv5063651,essv5043697,essv5146662,essv5029052,essv5093159,essv5058297,essv5038344,essv5019707,essv5130030,essv5087732,essv5138283,essv5154357,essv5020433,essv5113231,essv5154618,essv5089820,essv5068630,essv5084227,essv5148013,essv5116299,essv5145851,essv5130729,essv5037910,essv5062851,essv5101907,essv5152519,essv5078647,essv5130132,essv5051994,essv5141839,essv5154171,essv5047739,essv5113890,essv5153368,essv5070195,essv5022297,essv5053308 M 1184 0 79 "" NA12340,NA18486,NA18497,NA18498,NA18500,NA18515,NA18516,NA18520,NA18858,NA18860,NA18910,NA19027,NA19028,NA19095,NA19097,NA19107,NA19109,NA19117,NA19137,NA19153,NA19154,NA19172,NA19173,NA19174,NA19197,NA19199,NA19206,NA19209,NA19210,NA19211,NA19239,NA19240,NA19257,NA19258,NA19307,NA19321,NA19381,NA19382,NA19403,NA19429,NA19438,NA19449,NA19451,NA19452,NA19463,NA19466,NA19468,NA19471,NA19474,NA20282,NA20297,NA20301,NA20332,NA20335,NA20348,NA20521,NA20768,NA20796,NA20799,NA20894,NA20906,NA21344,NA21359,NA21366,NA21381,NA21383,NA21399,NA21401,NA21402,NA21404,NA21405,NA21473,NA21520,NA21596,NA21608,NA21614,NA21616,NA21686,NA21740 nsv1076139 1 13777799 13781400 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3766516 M 1 0 1 "" KWP1 esv3585258 1 13785920 13823188 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9859627 M 2504 0 1 LRRC38 HG01808 esv2504117 1 13796339 13796930 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5309749 M 1 1 0 "" NA18507 esv3892081 1 13799457 13948225 CNV loss Suktitipat_et_al_2014 25118596 SNP array essv25785248 M 3017 0 1 LRRC38,PDPN nsv833092 1 13804919 13963924 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442829,nssv1442818 M 95 0 2 LRRC38,PDPN nsv518971 1 13806039 13816121 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696439 M 2026 0 1 LRRC38 esv3585260 1 13807061 13809636 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9859803,essv9859805,essv9859804 M 2504 0 3 LRRC38 HG01988,HG02090,NA19323 esv2743997 1 13827928 13828226 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6753492,essv6847012 M 96 0 2 LRRC38 SSM058,SSM086 esv3546566 1 13827940 13828183 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9745313 M 767 0 1 LRRC38 esv2667214 1 13827952 13828141 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5926579,essv5968490,essv5927303,essv6404963,essv5528342,essv6405631,essv5678857,essv6527450,essv5652502,essv6133155,essv5453421,essv6434833,essv5474916,essv6525437,essv5490185,essv6554198,essv5499304,essv6010861,essv5437821,essv6465113,essv5883876,essv6097172,essv5693025,essv6110467,essv5887391,essv6300070,essv5633266,essv6049111,essv5629333,essv6551447,essv5829553,essv6295186,essv5540905,essv6220064,essv5688382,essv6272089,essv5849354,essv6010231,essv5878044,essv5996805,essv5525495,essv6129928,essv5627382,essv6045496,essv5527918,essv6472157,essv5571879,essv6174435,essv5424672,essv6327539,essv5430608,essv5997060,essv5529075,essv6597905,essv5589979,essv6335162,essv5654703,essv6282862,essv5645853,essv6270017,essv5507820,essv6276556,essv5752641,essv6351454,essv5882652,essv6574648,essv5447578,essv6354439,essv5817662,essv5979848,essv6581615,essv6009858,essv6251516,essv6136422,essv6010364,essv6486467,essv6375468,essv5996246,essv6307016,essv6597214,essv6165043 M 1151 0 81 LRRC38 HG00096,HG00108,HG00123,HG00125,HG00136,HG00137,HG00158,HG00232,HG00249,HG00252,HG00253,HG00277,HG00281,HG00282,HG00309,HG00313,HG00318,HG00324,HG00327,HG00336,HG00345,HG00346,HG00421,HG00437,HG00512,HG00524,HG00533,HG00583,HG00584,HG00589,HG00607,HG00608,HG00651,HG00690,HG00698,HG01052,HG01060,HG01069,HG01070,HG01174,HG01187,HG01334,HG01353,HG01365,HG01366,HG01375,HG01377,HG01384,HG01437,HG01441,HG01492,NA07347,NA10851,NA11894,NA11918,NA11930,NA11995,NA12003,NA12155,NA18548,NA18552,NA18633,NA18636,NA18856,NA18940,NA19093,NA19116,NA19225,NA19321,NA19360,NA19371,NA19374,NA19383,NA19391,NA19394,NA19395,NA19396,NA19397,NA19399,NA19428,NA20341 esv2744008 1 13848161 13849028 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933300,essv6776929,essv6972336,essv6718854,essv6707262,essv6937675,essv6703860,essv6682824,essv6738806 M 96 0 9 "" SSM007,SSM021,SSM022,SSM029,SSM034,SSM040,SSM041,SSM052,SSM067 esv2376333 1 13848507 13848866 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4939438 M 1 0 1 "" NA18507 esv2744019 1 13848519 13848893 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6776929,essv6707262,essv6682824 M 96 0 3 "" SSM034,SSM041,SSM067 esv1009061 1 13848607 13848607 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570627 M 3 1 0 "" HuRef esv3546788 1 13854165 13854375 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9745535 M 767 0 1 "" esv2658094 1 13854190 13854379 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6590058,essv6385230,essv6560168,essv6392379,essv6575837,essv6499862,essv6577413,essv6476298,essv6585751,essv5929006,essv6589873,essv6460990,essv6582753,essv5768748,essv6580857,essv6406195,essv6559901,essv6489783,essv6568499,essv6484334,essv6556159,essv6241175,essv6596432,essv6134546,essv6597866,essv5836452,essv6563386,essv6414725,essv6576788,essv6084609,essv6584145,essv6417259,essv5463492,essv6274427,essv5662908,essv6418213,essv5534797,essv6420430,essv5562956,essv6421536,essv5514861,essv5975828,essv5530771,essv6424190,essv5550129,essv5922194,essv5731451,essv5763687,essv5526966,essv6150035,essv5431792,essv6173582,essv5685828,essv5761386,essv5644291,essv6436623,essv5623698,essv6437222,essv5439999,essv6031404,essv5740411,essv6260719,essv5639876,essv6510999,essv5517554,essv6228340,essv5567034,essv6443922,essv5521790,essv6182792,essv5556836,essv6127554,essv5550463,essv6481467,essv5413303,essv6038810,essv5580293,essv6456993,essv5738045,essv6293672,essv5507613,essv6514553,essv5722966,essv6471375,essv5406423,essv6268292,essv5535262,essv6227837,essv5509575,essv5795599,essv5656503,essv5835677,essv5557860,essv6078499,essv5718507,essv6124796,essv5677481,essv6208914,essv5513619,essv6518239,essv5415706,essv6000834,essv5437298,essv6038528,essv5519714,essv6298750,essv5440187,essv6039474,essv5683130,essv6301748,essv5694770,essv5767133,essv5543408,essv6302531,essv5709203,essv6247692,essv5642618,essv6033408,essv5547019,essv6487241,essv5579923,essv5970214,essv5470649,essv6044956,essv5571023,essv6259387,essv5645527,essv6477733,essv5621734,essv6307927,essv5612708,essv5932411,essv5469047,essv6134227,essv5616040,essv6207898,essv5550077,essv6514724,essv5703927,essv6487837,essv5426478,essv6317269,essv5679858,essv5758327,essv5442693,essv6318609,essv5601070,essv5757224,essv5397079,essv5978187,essv5464387,essv5821522,essv5667103,essv6075772,essv5454528,essv5811810,essv5664819,essv5960653,essv5548836,essv6138316,essv5466717,essv6538902,essv5703516,essv6092130,essv5520251,essv6044589,essv6096620,essv6144375,essv5953739,essv5901771,essv6534412,essv6331160,essv6529094,essv5881093,essv5897617,essv6337280,essv5908267,essv6516581,essv6505563,essv5866379,essv5767193,essv5974643,essv5891494,essv5953067,essv6175858,essv6006928,essv6166899,essv5840187,essv6275652,essv6346310,essv6459433,essv6519506,essv6127900,essv5999398,essv6130641,essv5754235,essv6012974,essv5868716,essv5965042,essv6354370,essv6094221,essv5916737,essv6501009,essv6519944,essv6166006,essv6482388,essv6358787,essv5963405,essv6135002,essv5759534,essv5835282,essv5949197,essv6473802,essv6016920,essv6081436,essv6056130,essv6480899,essv5867077,essv5930142,essv6281794,essv5834404,essv6268057,essv5933301,essv6277010,essv6188162,essv5955605,essv5908486,essv6237551,essv6312358,essv6314133,essv6526690,essv6248492,essv6380526,essv6380935,essv5982563 M 1151 0 235 "" HG00103,HG00131,HG00133,HG00138,HG00140,HG00142,HG00154,HG00155,HG00182,HG00190,HG00233,HG00237,HG00246,HG00253,HG00259,HG00267,HG00268,HG00271,HG00276,HG00278,HG00281,HG00284,HG00285,HG00306,HG00309,HG00310,HG00318,HG00320,HG00324,HG00327,HG00334,HG00337,HG00339,HG00343,HG00346,HG00366,HG00368,HG00375,HG00418,HG00421,HG00422,HG00427,HG00428,HG00437,HG00442,HG00463,HG00464,HG00475,HG00476,HG00500,HG00513,HG00530,HG00531,HG00534,HG00537,HG00542,HG00543,HG00580,HG00581,HG00583,HG00589,HG00590,HG00592,HG00593,HG00607,HG00608,HG00613,HG00620,HG00638,HG00640,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00689,HG00690,HG00698,HG00699,HG00702,HG00704,HG00707,HG00731,HG01051,HG01052,HG01055,HG01070,HG01072,HG01080,HG01082,HG01083,HG01098,HG01101,HG01102,HG01107,HG01108,HG01134,HG01136,HG01137,HG01140,HG01149,HG01170,HG01173,HG01183,HG01253,HG01254,HG01334,HG01342,HG01350,HG01351,HG01356,HG01357,HG01360,HG01366,HG01378,HG01383,HG01384,HG01390,HG01462,HG01489,HG01515,HG01516,HG01518,HG01522,HG01551,NA06984,NA11994,NA12275,NA12340,NA18487,NA18534,NA18536,NA18543,NA18544,NA18548,NA18550,NA18553,NA18557,NA18559,NA18560,NA18561,NA18565,NA18574,NA18595,NA18596,NA18597,NA18599,NA18608,NA18610,NA18613,NA18622,NA18623,NA18633,NA18636,NA18856,NA18934,NA18956,NA18963,NA18982,NA18985,NA18986,NA18987,NA18990,NA18999,NA19010,NA19062,NA19064,NA19066,NA19067,NA19072,NA19074,NA19075,NA19076,NA19079,NA19080,NA19082,NA19088,NA19198,NA19223,NA19236,NA19248,NA19316,NA19317,NA19318,NA19327,NA19332,NA19372,NA19376,NA19381,NA19384,NA19390,NA19391,NA19396,NA19399,NA19401,NA19404,NA19428,NA19439,NA19443,NA19467,NA19625,NA19651,NA19652,NA19657,NA19658,NA19661,NA19663,NA19682,NA19685,NA19717,NA19726,NA19758,NA19774,NA19782,NA19786,NA19835,NA19901,NA19909,NA19917,NA19921,NA20276,NA20299,NA20314,NA20346,NA20503,NA20755,NA20760,NA20771,NA20818 nsv1113079 1 13881143 13881203 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967970 M 2 0 1 "" KWS2 esv3585262 1 13883458 13884461 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9860247,essv9860248 M 2504 0 2 "" HG03298,NA19440 esv2676801 1 13883468 13884505 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5398325 M 1151 0 1 "" NA19440 esv3585263 1 13884332 13902455 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9860267,essv9860266,essv9860265,essv9860264,essv9860249,essv9860263,essv9860254,essv9860253,essv9860250,essv9860252,essv9860251,essv9860255,essv9860262,essv9860257,essv9860256,essv9860258,essv9860261,essv9860260,essv9860259,essv9860277,essv9860271,essv9860276,essv9860270,essv9860269,essv9860268,essv9860272,essv9860275,essv9860274,essv9860273,essv9860279,essv9860278,essv9860280,essv9860281 M 2504 0 33 "" HG02697,HG02780,HG02790,HG03015,HG03234,HG03629,HG03643,HG03646,HG03684,HG03706,HG03745,HG03755,HG03756,HG03780,HG03812,HG03826,HG03864,HG03934,HG03941,HG03947,HG03960,HG03978,HG03989,HG04070,HG04076,HG04098,HG04099,HG04146,HG04153,HG04183,NA21088,NA21113,NA21120 nsv545567 1 13885279 14353071 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710253 M 17421 1 0 PDPN,PRDM2 esv2744031 1 13894060 13894905 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933301,essv6764158,essv6816578,essv6748320,essv6972337,essv6761850,essv6735975,essv6853234,essv6733479,essv6668946,essv6863955,essv6954736,essv6666891 M 96 0 13 "" SSM008,SSM021,SSM026,SSM029,SSM030,SSM031,SSM049,SSM050,SSM062,SSM063,SSM078,SSM087,SSM089 esv2417844 1 13894317 13894768 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4564737 M 1 0 1 "" NA18507 esv2744042 1 13894415 13894600 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6816578,essv6853234,essv6668946,essv6954736,essv6863955 M 96 0 5 "" SSM026,SSM031,SSM078,SSM087,SSM089 nsv1121440 1 13894417 13894612 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3965440 M 2 0 1 "" KWS2 nsv1152465 1 13894482 13894630 CNV deletion John_et_al_2014 26484159 Sequencing nssv3997069 M 1 0 1 "" KWB1 nsv1075610 1 13894484 13894707 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3765140 M 1 0 1 "" KWP1 esv2744053 1 13894499 13894574 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6668946,essv6954736,essv6863955 M 96 0 3 "" SSM026,SSM031,SSM089 nsv955038 1 13894530 13894714 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000481 M 1 0 1 "" BILGI_BIOE nsv460483 1 13903715 13916997 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537046 M 1557 0 1 PDPN 1780854159_A nsv545568 1 13903715 13916997 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173768 M 17421 0 1 PDPN 1780854159_A esv2744064 1 13931412 13932098 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6836183,essv6913997,essv6780864,essv6916662,essv6950548,essv6921713,essv6784991,essv6871711,essv6793280,essv6954737,essv6692757,essv6797446 M 96 0 12 PDPN SSM003,SSM016,SSM018,SSM025,SSM026,SSM037,SSM068,SSM069,SSM071,SSM072,SSM083,SSM091 nsv1144354 1 13931645 13931707 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995105 M 2 0 1 PDPN KWS1 esv3372731 1 13940018 13940033 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898631,essv8898633,essv8898638,essv8898637,essv8898630,essv8898634,essv8898632,essv8898635 M 185 8 0 PDPN NA18499,NA18501,NA18504,NA18505,NA18523,NA18856,NA19116,NA19257 esv3306243 1 13940019 13940020 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7749286,essv7740627,essv7750527,essv7760129,essv7760282,essv7752856,essv7761514,essv7754869 M 185 8 0 PDPN NA18499,NA18501,NA18504,NA18505,NA18523,NA18856,NA19116,NA19257 nsv1113080 1 13944237 13944300 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3967971 M 2 0 1 PDPN KWS2 nsv3076 1 13954193 13984534 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv474 M 9 1 0 "" NA19240 nsv528139 1 13973250 13989227 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704685 M 2026 0 1 "" esv1349671 1 13984919 13984919 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4353969 M 2 1 0 "" HuRef nsv523568 1 13992069 14004623 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699350 M 2026 0 1 "" nsv3187 1 13992339 14037646 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7852 M 9 0 1 PRDM2 NA12156 esv3585265 1 13994663 13998605 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9860347,essv9860348 M 2504 0 2 "" HG01075,HG01281 esv2744075 1 13999684 14000134 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6679164 M 96 0 1 "" SSM033 esv3547010 1 13999710 14000086 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9745757 M 767 0 1 "" nsv954813 1 14026501 14053600 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003086 M 1 1 0 PRDM2 BILGI_BIOE nsv474268 1 14076943 14076943 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012404 M 9 1 0 PRDM2 NA18507 esv3577741 1 14100342 14112863 CNV loss Uddin_et_al_2014 25503493 SNP array essv9797643,essv9797755 M 873 0 2 PRDM2 401012TP,401882CR esv2744086 1 14132559 14132935 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6714240 M 96 0 1 PRDM2 SSM043 nsv473350 1 14133899 14133899 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018587 M 9 1 0 PRDM2 NA19129 nsv1115337 1 14153100 14157000 CNV duplication Alsmadi_et_al_2014 24896259 Sequencing nssv3976389 M 2 1 0 "" KWS2 esv22539 1 14163040 14167016 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19106,esv16966 M 40 0 10 "" NA18505,NA18511,NA18517,NA18858,NA18907,NA18909,NA19099,NA19147,NA19225,NA19257 esv3585266 1 14163092 14167002 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9860357,essv9860390,essv9860391,essv9860356,essv9860350,essv9860355,essv9860349,essv9860351,essv9860354,essv9860353,essv9860352,essv9860363,essv9860358,essv9860372,essv9860389,essv9860359,essv9860362,essv9860361,essv9860360,essv9860366,essv9860371,essv9860365,essv9860364,essv9860370,essv9860367,essv9860369,essv9860368,essv9860379,essv9860374,essv9860388,essv9860373,essv9860378,essv9860375,essv9860377,essv9860376,essv9860382,essv9860387,essv9860381,essv9860380,essv9860383,essv9860386,essv9860385,essv9860384,essv9860451,essv9860440,essv9860400,essv9860417,essv9860394,essv9860399,essv9860393,essv9860392,essv9860395,essv9860398,essv9860397,essv9860396,essv9860402,essv9860416,essv9860407,essv9860401,essv9860406,essv9860403,essv9860405,essv9860404,essv9860410,essv9860415,essv9860409,essv9860408,essv9860414,essv9860411,essv9860413,essv9860412,essv9860431,essv9860422,essv9860439,essv9860450,essv9860418,essv9860421,essv9860420,essv9860419,essv9860425,essv9860430,essv9860424,essv9860423,essv9860429,essv9860426,essv9860428,essv9860427,essv9860449,essv9860438,essv9860437,essv9860436,essv9860435,essv9860434,essv9860432,essv9860433,essv9860448,essv9860443,essv9860441,essv9860442,essv9860447,essv9860444,essv9860446,essv9860445,essv9860464,essv9860455,essv9860481,essv9860454,essv9860453,essv9860452,essv9860463,essv9860458,essv9860457,essv9860456,essv9860462,essv9860459,essv9860461,essv9860460,essv9860466,essv9860471,essv9860465,essv9860480,essv9860470,essv9860467,essv9860469,essv9860468,essv9860474,essv9860479,essv9860473,essv9860472,essv9860475,essv9860478,essv9860477,essv9860476,essv9860493,essv9860495,essv9860485,essv9860484,essv9860483,essv9860482,essv9860487,essv9860494,essv9860492,essv9860486,essv9860491,essv9860488,essv9860490,essv9860489,essv9860500,essv9860508,essv9860499,essv9860496,essv9860498,essv9860497,essv9860502,essv9860507,essv9860501,essv9860506,essv9860503,essv9860505,essv9860504 M 2504 0 160 "" HG01028,HG01188,HG01197,HG01413,HG01524,HG01551,HG01610,HG01883,HG01886,HG01894,HG01912,HG01914,HG02013,HG02051,HG02053,HG02111,HG02143,HG02144,HG02322,HG02323,HG02337,HG02427,HG02433,HG02496,HG02502,HG02511,HG02545,HG02555,HG02562,HG02568,HG02574,HG02595,HG02614,HG02620,HG02629,HG02634,HG02646,HG02667,HG02716,HG02757,HG02804,HG02808,HG02817,HG02820,HG02852,HG02885,HG02891,HG02895,HG02947,HG02968,HG03024,HG03025,HG03040,HG03046,HG03052,HG03054,HG03060,HG03078,HG03079,HG03084,HG03091,HG03097,HG03129,HG03130,HG03133,HG03136,HG03139,HG03168,HG03175,HG03195,HG03225,HG03265,HG03280,HG03291,HG03297,HG03300,HG03301,HG03311,HG03343,HG03369,HG03376,HG03385,HG03388,HG03410,HG03436,HG03437,HG03439,HG03445,HG03446,HG03449,HG03458,HG03464,HG03469,HG03472,HG03485,HG03499,HG03514,HG03515,HG03518,HG03556,HG03578,HG03583,NA18486,NA18501,NA18505,NA18510,NA18511,NA18517,NA18858,NA18871,NA18881,NA18907,NA18909,NA19023,NA19035,NA19036,NA19092,NA19093,NA19095,NA19099,NA19107,NA19121,NA19130,NA19131,NA19137,NA19146,NA19147,NA19171,NA19225,NA19257,NA19308,NA19309,NA19316,NA19318,NA19347,NA19374,NA19378,NA19383,NA19390,NA19391,NA19394,NA19403,NA19431,NA19437,NA19440,NA19443,NA19449,NA19452,NA19456,NA19473,NA19703,NA19712,NA19916,NA19982,NA20126,NA20281,NA20287,NA20289,NA20357,NA20412 esv2660771 1 14163093 14167002 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5601272,essv6591425,essv5688053,essv6414672,essv5561509,essv5878578,essv5663105,essv6150516,essv5712320,essv6289637,essv5446129,essv6569919,essv5638982,essv6499202,essv5653858,essv5837003,essv5638046,essv6101699,essv5614058,essv6586520,essv5738996,essv6131673,essv5456701,essv5947056,essv5660168,essv6556082,essv5508810,essv6546952,essv5652186,essv6479979,essv5470781,essv6302125,essv5421703,essv6241574,essv5617103,essv6030971,essv6143653,essv6326609,essv6198786,essv5881645,essv6334563,essv6112891,essv6563699,essv6057318,essv5850685,essv6344862,essv6475055,essv6208975,essv5913446,essv6113322,essv6276590,essv6007775,essv6100642,essv6064476 M 1151 0 54 "" HG01188,HG01197,HG01551,NA18486,NA18487,NA18501,NA18505,NA18511,NA18517,NA18858,NA18871,NA18907,NA19092,NA19093,NA19099,NA19107,NA19130,NA19137,NA19147,NA19171,NA19225,NA19257,NA19316,NA19318,NA19347,NA19373,NA19374,NA19381,NA19382,NA19383,NA19390,NA19391,NA19394,NA19403,NA19431,NA19437,NA19440,NA19443,NA19444,NA19449,NA19452,NA19453,NA19456,NA19462,NA19469,NA19470,NA19473,NA19703,NA19707,NA19712,NA19916,NA19982,NA20126,NA20287 nsv508007 1 14184921 14190921 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621465,nssv618491 M 4 0 0 "" CHM,NA15510 esv3577742 1 14208081 14228490 CNV loss Uddin_et_al_2014 25503493 SNP array essv9797866 M 873 0 1 "" 400272AE nsv516549 1 14208488 14209336 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv669085,nssv690011 M 2026 0 2 "" esv3585267 1 14222902 14228186 CNV loss 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9860509 M 2504 0 1 "" HG03784 esv3585268 1 14240342 14255075 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9860510 M 2504 1 0 "" HG02395 nsv516435 1 14284460 14286464 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv681150,nssv668340,nssv683301 M 2026 0 3 "" esv35099 1 14294605 14370368 CNV gain Pinto_et_al_2007 17911159 SNP array essv6986978,essv6979949 M 771 2 0 "" NA18863 esv24677 1 14295319 14295827 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16259 M 40 0 1 "" NA19257 esv2758923 1 14305082 14372400 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756836 M 270 2 0 "" NA18861,NA18863 dgv34n100 1 14306507 14370745 CNV gain Coe_et_al_2014 25217958 Oligo aCGH,SNP array nsv1004214,nsv1009457,nsv1006184,nsv1000636,nsv1011918,nsv1001764 M 29084 9 0 "" dgv8e214 1 14311598 14373032 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing esv3585272,esv3585271,esv3585270 M 2504 3 0 "" HG03130,NA18618,NA18861 esv27027 1 14311609 14371586 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13313 M 40 1 0 "" NA18861 esv2764228 1 14313274 14370757 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005006,essv7005007,essv7005008 M 1109 3 0 "" RW_0186,RW_0292,RW_0330 nsv545569 1 14313480 14371137 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710254 M 17421 1 0 "" nsv524444 1 14313480 14371175 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700376 M 2026 1 0 "" nsv1075614 1 14331191 14331260 CNV deletion Thareja_et_al_2015 25765185 Sequencing nssv3769444 M 1 0 1 "" KWP1 nsv1133811 1 14331192 14331260 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3969382 M 2 0 1 "" KWS2 nsv517840 1 14331940 14337844 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695245 M 2026 0 1 "" esv1011257 1 14340834 14349546 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563991 M 3 0 1 "" HuRef nsv1144355 1 14376611 14376670 CNV deletion Alsmadi_et_al_2014 24896259 Sequencing nssv3995106 M 2 0 1 "" KWS1 esv3585273 1 14378346 14435580 CNV gain 1000_Genomes_Consortium_Phase_3 21293372 Sequencing essv9860536 M 2504 1 0 "" NA18618 esv2573663 1 14436092 14439233 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5360365 M 1 0 1 "" NA18507 nsv819952 1 14436093 14438830 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419473 M 2 0 1 "" AK1 esv3547566 1 14436169 14438343 CNV deletion Boomsma_et_al_2014 23714750 Sequencing essv9746313 M 767 0 1 "" nsv829514 1 14436261 14436764 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431794 M 31 0 1 "" AK20 esv3305958 1 14436308 14436309 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7748233,essv7762927,essv7744901,essv7760986,essv7758997,essv7753864,essv7745094,essv7743378,essv7742210,essv7742581,essv7762379,essv7752181,essv7748195,essv7762098,essv7756760,essv7761199,essv7746231,essv7749698,essv7741926,essv7758820,essv7753211,essv7754514,essv7742010,essv7756552,essv7751856,essv7740898,essv7757903,essv7740359,essv7756960,essv7756116,essv7745613,essv7746649,essv7757610,essv7752332,essv7740711,essv7753507,essv7757452,essv7742692,essv7759946,essv7756467,essv7749458,essv7746996,essv7744194,essv7747825,essv7750960,essv7749958,essv7751546,essv7747376,essv7759328,essv7758154 M 185 50 0 "" NA06986,NA07000,NA07051,NA11920,NA11995,NA12043,NA12249,NA12750,NA12776,NA18501,NA18507,NA18508,NA18510,NA18516,NA18519,NA18522,NA18526,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18605,NA18608,NA18638,NA18870,NA18912,NA18940,NA18951,NA18960,NA18964,NA19005,NA19093,NA19099,NA19114,NA19129,NA19137,NA19138,NA19225 esv3338675 1 14436308 14436316 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898691,essv8898693,essv8898664,essv8898662,essv8898667,essv8898688,essv8898663,essv8898668,essv8898674,essv8898694,essv8898659,essv8898644,essv8898648,essv8898651,essv8898661,essv8898673,essv8898652,essv8898684,essv8898679,essv8898657,essv8898654,essv8898675,essv8898660,essv8898690,essv8898676,essv8898666,essv8898689,essv8898686,essv8898650,essv8898645,essv8898678,essv8898672,essv8898682,essv8898640,essv8898643,essv8898653,essv8898680,essv8898671,essv8898687,essv8898656,essv8898677,essv8898646,essv8898642,essv8898683,essv8898655,essv8898649,essv8898685,essv8898639,essv8898665,essv8898641 M 185 50 0 "" NA06986,NA07000,NA07051,NA11920,NA11995,NA12043,NA12249,NA12750,NA12776,NA18501,NA18507,NA18508,NA18510,NA18516,NA18519,NA18522,NA18526,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18605,NA18608,NA18638,NA18870,NA18912,NA18940,NA18951,NA18960,NA18964,NA19005,NA19093,NA19099,NA19114,NA19129,NA19137,NA19138,NA19225 esv22693 1 14436311 14438948 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17238 M 40 0 21 "" NA11931,NA12044,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA15510,NA18505,NA18508,NA18511,NA18523,NA18858,NA18861,NA19099,NA19114,NA19129,NA19147,NA19225,NA19240 esv2744097 1 14436321 14438933 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972338,essv6832594,essv6877663,essv6744929,essv6759039,essv6906097,essv6941777,essv6902527,essv6961548,essv6843821,essv6813165,essv6780865,essv6933302,essv6917422,essv6675196,essv6913998,essv6821179,essv6847013,essv6742137,essv6776930,essv6859186,essv6784565,essv6839968,essv6710577,essv6885981,essv6807373,essv6950196,essv6801043,essv6748331,essv6714241,essv6686151,essv6689256,essv6816579,essv6929056,essv6967921,essv6669199,essv6720819,essv6793281,essv6836184,essv6753494,essv6761852,essv6810337,essv6843881,essv6880417,essv6816698,essv6766535,essv6804400,essv6761851,essv6889005,essv6895845,essv6921714,essv6910038,essv6868708,essv6733481,essv6707263,essv6753493,essv6733480,essv6668947,essv6874701,essv6898609,essv6750594,essv6750593,essv6828995,essv6892316,essv6703861,essv6863956,essv6946492,e