A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9954



Internal ID15847866
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:71741726..71778786hg38UCSC Ensembl
OuterchrX:70961576..70998636hg19UCSC Ensembl
OuterchrX:70878301..70915361hg18UCSC Ensembl
OuterchrX:70744597..70781657hg17UCSC Ensembl
CytobandXq13.1
Allele length
AssemblyAllele length
hg3837061
hg1937061
hg1837061
hg1737061
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv27557
SamplesNA18504
Known GenesCXorf49, CXorf49B, LINC00891, LOC100132741
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9954
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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