A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9907



Internal ID15501133
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:38962558..38991992hg38UCSC Ensembl
Outerchr22:39358563..39387997hg19UCSC Ensembl
Outerchr22:37688509..37717943hg18UCSC Ensembl
Outerchr22:37683063..37712497hg17UCSC Ensembl
Cytoband22q13.1
Allele length
AssemblyAllele length
hg3829435
hg1929435
hg1829435
hg1729435
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv26104, nssv23271, nssv22625, nssv26608, nssv25973
SamplesNA10839, NA19007, NA10847, NA18572, NA18537
Known GenesAPOBEC3A, APOBEC3A_B, APOBEC3B, APOBEC3B-AS1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9907
Frequency
Sample Size31
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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