A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9891



Internal ID15847803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:58723962..58726722hg38UCSC Ensembl
Outerchr2:58951097..58953857hg19UCSC Ensembl
Outerchr2:58804601..58807361hg18UCSC Ensembl
Outerchr2:58862748..58865508hg17UCSC Ensembl
Cytoband2p16.1
Allele length
AssemblyAllele length
hg382761
hg192761
hg182761
hg172761
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv28101
SamplesNA18860
Known GenesLINC01122
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9891
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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