A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv98



Internal ID15383860
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:20420291..22272026hg38UCSC Ensembl
Outerchr15:20625544..22559977hg19UCSC Ensembl
Outerchr15:18885558..20061341hg18UCSC Ensembl
Outerchr15:18885558..20061341hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381851736
hg191934434
hg181175784
hg171175784
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv1n1
Supporting Variantsnssv98
SamplesNA15510
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSequencing
AnalysisFosmids were categorized as discordant if the in silico size was in excess of three standard deviations from the mean (<32 or 48> kb) and/or showed incorrect orientation of ends
PlatformCapillary
Comments
ReferenceTuzun_et_al_2005
Pubmed ID15895083
Accession Number(s)nsv98
Frequency
Sample Size1
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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