A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9777



Internal ID15847689
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:1604127..1615887hg38UCSC Ensembl
Outerchr20:1584773..1596533hg19UCSC Ensembl
Outerchr20:1532773..1544533hg18UCSC Ensembl
Outerchr20:1532773..1544533hg17UCSC Ensembl
Cytoband20p13
Allele length
AssemblyAllele length
hg3811761
hg1911761
hg1811761
hg1711761
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv25587, nssv26905, nssv24754, nssv24626, nssv28606, nssv25578, nssv27668, nssv25019, nssv25481, nssv25929, nssv26444, nssv24107, nssv26088, nssv27108
SamplesNA11830, NA12155, NA18942, NA07048, NA19007, NA10863, NA19221, NA18537, NA18517, NA18564, NA19240, NA19144, NA19173, NA18552
Known GenesSIRPB1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9777
Frequency
Sample Size31
Observed Gain0
Observed Loss14
Observed Complex0
Frequencyn/a


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