A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9715



Internal ID15847627
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:36238786..36320847hg38UCSC Ensembl
Outerchr19:36729688..36811749hg19UCSC Ensembl
Outerchr19:41421528..41503589hg18UCSC Ensembl
Outerchr19:41421528..41503589hg17UCSC Ensembl
Cytoband19q13.12
Allele length
AssemblyAllele length
hg3882062
hg1982062
hg1882062
hg1782062
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv24187, nssv24815, nssv22279, nssv27488, nssv23726, nssv25834, nssv27536, nssv28494, nssv27548, nssv25110, nssv26948, nssv24356, nssv21635, nssv27766, nssv26907
SamplesNA18502, NA18504, NA18563, NA18860, NA18942, NA07048, NA10839, NA18975, NA10847, NA18572, NA19221, NA18517, NA19240, NA19173, NA18972
Known GenesLINC00665, LOC100134317
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9715
Frequency
Sample Size31
Observed Gain10
Observed Loss5
Observed Complex0
Frequencyn/a


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