A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9712



Internal ID15500938
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:35357904..35373505hg38UCSC Ensembl
Outerchr19:35848806..35864407hg19UCSC Ensembl
Outerchr19:40540646..40556247hg18UCSC Ensembl
Outerchr19:40540646..40556247hg17UCSC Ensembl
Cytoband19q13.12
Allele length
AssemblyAllele length
hg3815602
hg1915602
hg1815602
hg1715602
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv24332, nssv22000, nssv21970, nssv25474, nssv25520, nssv22061, nssv27498, nssv21940, nssv25071, nssv24790, nssv25077, nssv25497, nssv25102, nssv25027, nssv25046, nssv22121, nssv24330, nssv21910, nssv24765, nssv25052, nssv25121, nssv25419, nssv24161, nssv25096, nssv21605
SamplesNA12802, NA18975, NA10847, NA18972, NA10863, NA18563, NA12740, NA07048, NA12872, NA18564, NA19007
Known GenesFFAR3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9712
Frequency
Sample Size31
Observed Gain0
Observed Loss11
Observed Complex0
Frequencyn/a


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