A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9686



Internal ID15500912
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:22806652..23470948hg38UCSC Ensembl
Outerchr19:22989454..23653750hg19UCSC Ensembl
Outerchr19:22781294..23445590hg18UCSC Ensembl
Outerchr19:22781294..23445590hg17UCSC Ensembl
Cytoband19p12
Allele length
AssemblyAllele length
hg38664297
hg19664297
hg18664297
hg17664297
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv24686, nssv25292, nssv24741, nssv24637, nssv22001, nssv24146, nssv26106, nssv24921, nssv27708, nssv24971, nssv26811, nssv26844, nssv24109, nssv24172, nssv24635, nssv21730, nssv26781, nssv26833, nssv24985, nssv24661, nssv21545, nssv26822, nssv24712, nssv21790, nssv25344, nssv26803, nssv24946, nssv24689, nssv24663, nssv23871, nssv27440, nssv27422, nssv27341, nssv27715, nssv27448, nssv24120, nssv27359, nssv25281, nssv25746, nssv24170, nssv23925, nssv25010, nssv28459, nssv25319, nssv25768, nssv24222, nssv25306, nssv22219, nssv27470, nssv25273, nssv27474, nssv24196, nssv27462, nssv28460, nssv26800, nssv27454, nssv27350, nssv22189, nssv27456, nssv25317, nssv26792, nssv21971, nssv28458, nssv26476, nssv23898, nssv25694, nssv21820, nssv24952, nssv23640, nssv24715, nssv24927, nssv27466, nssv21700, nssv27431, nssv26814
SamplesNA18502, NA11830, NA18980, NA07029, NA18504, NA12155, NA18563, NA12802, NA18860, NA18942, NA07048, NA10839, NA18975, NA19007, NA10847, NA10863, NA12872, NA18572, NA19221, NA18537, NA18853, NA19132, NA18517, NA18564, NA19240, NA19144, NA12740, NA19173, NA18972, NA18552
Known GenesLOC100132815, ZNF724P, ZNF728, ZNF730, ZNF91
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9686
Frequency
Sample Size31
Observed Gain30
Observed Loss15
Observed Complex0
Frequencyn/a


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