A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9581



Internal ID15500807
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:60255220..60396836hg38UCSC Ensembl
Outerchr17:58332581..58474197hg19UCSC Ensembl
Outerchr17:55687363..55828979hg18UCSC Ensembl
Outerchr17:55687363..55828979hg17UCSC Ensembl
Cytoband17q23.2
Allele length
AssemblyAllele length
hg38141617
hg19141617
hg18141617
hg17141617
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv24746, nssv27184, nssv21709, nssv23739
SamplesNA18972, NA10863, NA18572, NA18980
Known GenesUSP32
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9581
Frequency
Sample Size31
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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