A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9453



Internal ID15500679
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:70010740..70075654hg38UCSC Ensembl
Outerchr16:70044643..70109557hg19UCSC Ensembl
Outerchr16:68602144..68667058hg18UCSC Ensembl
Outerchr16:68602144..68667058hg17UCSC Ensembl
Cytoband16q22.1
Allele length
AssemblyAllele length
hg3864915
hg1964915
hg1864915
hg1764915
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv23881, nssv26455, nssv22554, nssv23783, nssv21802, nssv23730
SamplesNA18975, NA18972, NA18537, NA18942, NA19007, NA18980
Known GenesMIR1972-1, MIR1972-2, PDXDC2P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9453
Frequency
Sample Size31
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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