A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9446



Internal ID15500672
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:55806461..55833345hg38UCSC Ensembl
Outerchr16:55840373..55867257hg19UCSC Ensembl
Outerchr16:54397874..54424758hg18UCSC Ensembl
Outerchr16:54397874..54424758hg17UCSC Ensembl
Cytoband16q12.2
Allele length
AssemblyAllele length
hg3826885
hg1926885
hg1826885
hg1726885
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv20569, nssv23185, nssv26620, nssv23326, nssv24988, nssv23089, nssv23800, nssv21652, nssv23596, nssv23729
SamplesNA18980, NA12155, NA18563, NA18942, NA07048, NA10839, NA18572, NA18537, NA18517, NA18564
Known GenesCES1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9446
Frequency
Sample Size31
Observed Gain10
Observed Loss0
Observed Complex0
Frequencyn/a


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