A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9363



Internal ID15500589
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:16293371..16315221hg38UCSC Ensembl
Outerchr16:16387228..16409078hg19UCSC Ensembl
Outerchr16:16294729..16316579hg18UCSC Ensembl
Outerchr16:16294729..16316579hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg3821851
hg1921851
hg1821851
hg1721851
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv25807, nssv22996, nssv22636, nssv22879, nssv23127
SamplesNA18980, NA19007, NA18537, NA18972, NA18552
Known GenesMIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, NOMO3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9363
Frequency
Sample Size31
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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