A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9357



Internal ID15500583
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:14953998..15031888hg38UCSC Ensembl
Outerchr16:15047855..15125745hg19UCSC Ensembl
Outerchr16:14955356..15033246hg18UCSC Ensembl
Outerchr16:14955356..15033246hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg3877891
hg1977891
hg1877891
hg1777891
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv25066, nssv26649, nssv22850, nssv23099, nssv25741, nssv22938, nssv20932, nssv22398, nssv21954, nssv26359, nssv25907
SamplesNA18975, NA18972, NA18517, NA18860, NA18537, NA18502, NA18504, NA18564, NA18942, NA19007, NA18980
Known GenesMIR1972-1, MIR1972-2, PDXDC1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9357
Frequency
Sample Size31
Observed Gain0
Observed Loss11
Observed Complex0
Frequencyn/a


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