A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9324



Internal ID15500550
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:16470652..16954729hg38UCSC Ensembl
Outerchr1:16797147..17281224hg19UCSC Ensembl
Outerchr1:16669734..17153811hg18UCSC Ensembl
Outerchr1:16542453..17026530hg17UCSC Ensembl
Cytoband1p36.13
Allele length
AssemblyAllele length
hg38484078
hg19484078
hg18484078
hg17484078
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16084, nssv13420, nssv14091, nssv11767, nssv14744, nssv13104, nssv15424, nssv14100, nssv29255, nssv11785, nssv13754, nssv28922, nssv12428, nssv14414, nssv15104, nssv29254, nssv12758, nssv12098, nssv12116, nssv15768, nssv13419, nssv14410, nssv13752, nssv12440, nssv13761, nssv14430, nssv12766, nssv13426, nssv15754, nssv14740, nssv17423, nssv13092, nssv16098, nssv14080, nssv15779, nssv17093, nssv13090, nssv12778, nssv14760, nssv13749, nssv14082, nssv13742, nssv14085, nssv12097, nssv14415, nssv13096, nssv12448, nssv13750, nssv13756, nssv14421, nssv12753, nssv13089, nssv14084, nssv16414, nssv16763, nssv11768, nssv15438, nssv13422
SamplesNA12802, NA18975, NA19173, NA10839, NA10847, NA18972, NA18517, NA19144, NA18860, NA07029, NA12155, NA12740, NA07048, NA18537, NA18502, NA18564, NA19221, NA18552, NA11830, NA18853, NA19007, NA18980
Known GenesCROCC, CROCCP2, CROCCP3, ESPNP, LOC729574, MIR3675, MST1L, MST1P2, NBPF1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9324
Frequency
Sample Size31
Observed Gain11
Observed Loss17
Observed Complex0
Frequencyn/a


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