A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9315



Internal ID15847227
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:101859658..101981189hg38UCSC Ensembl
Outerchr15:102399861..102521392hg19UCSC Ensembl
Outerchr15:100217384..100338915hg18UCSC Ensembl
Outerchr15:100217384..100338915hg17UCSC Ensembl
Cytoband15q26.3
Allele length
AssemblyAllele length
hg38121532
hg19121532
hg18121532
hg17121532
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv25592, nssv24916, nssv21662, nssv23225, nssv22400, nssv20209, nssv20105, nssv23813, nssv24932, nssv22366, nssv25530, nssv21864, nssv20020, nssv22504, nssv26105, nssv26496, nssv21786, nssv27664, nssv23876, nssv24861
SamplesNA07029, NA18504, NA12155, NA12802, NA18860, NA10839, NA18975, NA10847, NA10863, NA18572, NA19221, NA18853, NA19132, NA18517, NA19240, NA19144, NA19173, NA18972, NA18552
Known GenesDDX11L9, FAM138E, LOC100288778, MIR6859-1, MIR6859-2, OR4F4, WASH3P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9315
Frequency
Sample Size31
Observed Gain15
Observed Loss4
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer