A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9290



Internal ID15500516
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:84146793..84550083hg38UCSC Ensembl
Outerchr15:84815545..85093314hg19UCSC Ensembl
Outerchr15:82606549..82894318hg18UCSC Ensembl
Outerchr15:82606549..82894318hg17UCSC Ensembl
Cytoband15q25.2
Allele length
AssemblyAllele length
hg38403291
hg19277770
hg18287770
hg17287770
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv22615, nssv22246, nssv25916, nssv27578, nssv24802, nssv23122, nssv26076, nssv25422, nssv26349, nssv27570
SamplesNA18517, NA18860, NA12740, NA18502, NA19221, NA18552, NA19132, NA19240, NA18980
Known GenesDNM1P41, GOLGA6L4, GOLGA6L5P, LOC100505679, LOC388152, LOC440300, LOC642423, UBE2Q2P1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9290
Frequency
Sample Size31
Observed Gain3
Observed Loss7
Observed Complex0
Frequencyn/a


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