A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9270



Internal ID15500496
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:56394748..56468222hg38UCSC Ensembl
Outerchr15:56686946..56760420hg19UCSC Ensembl
Outerchr15:54474238..54547712hg18UCSC Ensembl
Outerchr15:54474238..54547712hg17UCSC Ensembl
Cytoband15q21.3
Allele length
AssemblyAllele length
hg3873475
hg1973475
hg1873475
hg1773475
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv27546
SamplesNA19221
Known GenesMNS1, TEX9
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9270
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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