A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9241



Internal ID15500467
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:34381430..34585041hg38UCSC Ensembl
Outerchr15:34673631..34877242hg19UCSC Ensembl
Outerchr15:32460923..32664534hg18UCSC Ensembl
Outerchr15:32460923..32664534hg17UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38203612
hg19203612
hg18203612
hg17203612
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv21916, nssv23590, nssv21946, nssv22466, nssv22158, nssv20201, nssv19690, nssv19835, nssv19805, nssv22130, nssv24363, nssv19720, nssv19660, nssv24337, nssv20572, nssv22525, nssv24510, nssv23570, nssv21546, nssv25625, nssv25254, nssv23543, nssv25905, nssv19999, nssv25322, nssv25602, nssv23562, nssv22294, nssv25329, nssv22495, nssv26101, nssv23478, nssv19775, nssv25279, nssv23534, nssv25926, nssv21976, nssv22863, nssv21302, nssv22406, nssv23598, nssv22515, nssv27452, nssv22277, nssv22892, nssv25297, nssv25304, nssv23506, nssv26120
SamplesNA12802, NA10839, NA10847, NA18972, NA18517, NA19144, NA18860, NA07029, NA10863, NA12155, NA18563, NA12740, NA18537, NA18572, NA18502, NA12872, NA18504, NA18564, NA18942, NA19221, NA18552, NA19132, NA11830, NA19240, NA18853, NA19007, NA18980
Known GenesGOLGA8A, GOLGA8B, MIR1233-1, MIR1233-2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9241
Frequency
Sample Size31
Observed Gain26
Observed Loss1
Observed Complex0
Frequencyn/a


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