A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9238



Internal ID15500464
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:32153679..32609879hg38UCSC Ensembl
Outerchr15:32445880..32902080hg19UCSC Ensembl
Outerchr15:30233172..30689372hg18UCSC Ensembl
Outerchr15:30233172..30689372hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg38456201
hg19456201
hg18456201
hg17456201
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv25272, nssv23515, nssv27435, nssv27369, nssv23430, nssv27387, nssv23459, nssv25863, nssv23431, nssv23486, nssv25556, nssv22346, nssv24484, nssv23514, nssv27378, nssv22316, nssv22376, nssv23487, nssv21886, nssv25229, nssv27444, nssv19969, nssv27426, nssv23458, nssv25579, nssv25884
SamplesNA18972, NA18517, NA12155, NA18572, NA18502, NA19221, NA18552, NA19132, NA11830, NA19240, NA19007
Known GenesCHRNA7, GOLGA8K, GOLGA8O, GOLGA8R, LOC100996255, ULK4P1, ULK4P2, ULK4P3, WHAMMP1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9238
Frequency
Sample Size31
Observed Gain4
Observed Loss8
Observed Complex0
Frequencyn/a


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