A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9208



Internal ID15847120
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:28281866..28327552hg38UCSC Ensembl
Outerchr15:28527012..28572698hg19UCSC Ensembl
Outerchr15:26200607..26246293hg18UCSC Ensembl
Outerchr15:26200607..26246293hg17UCSC Ensembl
Cytoband15q13.1
Allele length
AssemblyAllele length
hg3845687
hg1945687
hg1845687
hg1745687
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv22255, nssv22717, nssv22977, nssv24328
SamplesNA11830, NA18980, NA19240, NA12740
Known GenesHERC2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9208
Frequency
Sample Size31
Observed Gain1
Observed Loss3
Observed Complex0
Frequencyn/a


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