A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv9201



Internal ID15500427
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:25685984..25687666hg38UCSC Ensembl
Outerchr15:25931131..25932813hg19UCSC Ensembl
Outerchr15:23482224..23483906hg18UCSC Ensembl
Outerchr15:23482224..23483906hg17UCSC Ensembl
Cytoband15q12
Allele length
AssemblyAllele length
hg381683
hg191683
hg181683
hg171683
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv19819, nssv24177, nssv20452, nssv21366, nssv21978, nssv22659
SamplesNA18504, NA18942, NA10863, NA18572, NA18564, NA12740
Known GenesATP10A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv9201
Frequency
Sample Size31
Observed Gain5
Observed Loss1
Observed Complex0
Frequencyn/a


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