A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv894386



Internal ID6301397
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:139395473..139690144hg19UCSC Ensembl
Outerchr9:139376426..139693992hg19UCSC Ensembl
Innerchr9:138515294..138809965hg18UCSC Ensembl
Outerchr9:138496247..138813813hg18UCSC Ensembl
Cytoband9q34.3
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
Variant TypeCNV Loss
Copy Number
Allele State
Allele Origin
Probe Count
Merged StatusS
Merged Variants
Supporting Variantsnssv1529837
SamplesMS10123
Known GenesAGPAT2, C9orf163, EGFL7, FAM69B, KIAA1984, LCN10, LCN15, LCN6, LCN8, LOC100128593, MIR126, MIR4673, MIR4674, NOTCH1, SEC16A, SNHG7, SNORA17, SNORA43, TMEM141
Method
Analysis
PlatformIllumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3
Comments
ReferenceXu_et_al_2011
Pubmed ID21882294
Accession Number(s)nsv894386
Frequency
Sample Size6533
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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