A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv887856



Internal ID6294867
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:27089764..27287536hg19UCSC Ensembl
Outerchr7:27073731..27297791hg19UCSC Ensembl
Innerchr7:27056289..27254061hg18UCSC Ensembl
Outerchr7:27040256..27264316hg18UCSC Ensembl
Cytoband7p15.2
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
Variant TypeCNV Loss
Copy Number
Allele State
Allele Origin
Probe Count
Merged StatusS
Merged Variants
Supporting Variantsnssv1570726
SamplesIS32322
Known GenesEVX1, HOTAIRM1, HOTTIP, HOXA1, HOXA10, HOXA10-HOXA9, HOXA11, HOXA11-AS1, HOXA13, HOXA2, HOXA3, HOXA4, HOXA5, HOXA6, HOXA7, HOXA9, LOC100133311, MIR196B
Method
Analysis
PlatformIllumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3
Comments
ReferenceXu_et_al_2011
Pubmed ID21882294
Accession Number(s)nsv887856
Frequency
Sample Size6533
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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