A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv8859



Internal ID15500085
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:90054376..90109512hg38UCSC Ensembl
Outerchr11:89787544..89842680hg19UCSC Ensembl
Outerchr11:89427192..89482328hg18UCSC Ensembl
Outerchr11:89427192..89482328hg17UCSC Ensembl
Cytoband11q14.3
Allele length
AssemblyAllele length
hg3855137
hg1955137
hg1855137
hg1755137
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv23529, nssv23251, nssv18190, nssv20859, nssv20597, nssv20475
SamplesNA18563, NA12802, NA18537, NA19132, NA12740, NA18972
Known GenesUBTFL1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv8859
Frequency
Sample Size31
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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