A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv8833



Internal ID15846745
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:61195201..61254097hg38UCSC Ensembl
Outerchr11:60962673..61021569hg19UCSC Ensembl
Outerchr11:60719249..60778145hg18UCSC Ensembl
Outerchr11:60719249..60778145hg17UCSC Ensembl
Cytoband11q12.2
Allele length
AssemblyAllele length
hg3858897
hg1958897
hg1858897
hg1758897
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv20887, nssv20178, nssv23191, nssv20305, nssv20205, nssv23752, nssv21208, nssv22691, nssv22351, nssv23219, nssv19826, nssv19966, nssv19284, nssv20888, nssv25311, nssv20619, nssv23025, nssv18409, nssv22303, nssv18382, nssv19936, nssv20507
SamplesNA18502, NA11830, NA18980, NA18504, NA12155, NA18563, NA18860, NA18942, NA18975, NA19007, NA18572, NA19221, NA18537, NA19132, NA18564, NA19240, NA19144, NA12740, NA18972, NA18552
Known GenesPGA3, PGA4, PGA5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv8833
Frequency
Sample Size31
Observed Gain20
Observed Loss0
Observed Complex0
Frequencyn/a


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