A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv883278



Internal ID6290289
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:179219357..179231681hg19UCSC Ensembl
Outerchr5:179214818..179238794hg19UCSC Ensembl
Innerchr5:179151963..179164287hg18UCSC Ensembl
Outerchr5:179147424..179171400hg18UCSC Ensembl
Cytoband5q35.3
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
Variant TypeCNV Loss
Copy Number
Allele State
Allele Origin
Probe Count
Merged StatusM
Merged Variants
Supporting Variantsnssv1508152, nssv1510715, nssv1499122
SamplesSP54988, SP50159, SP54725
Known GenesLTC4S, MGAT4B, MIR1229, SQSTM1
Method
Analysis
PlatformIllumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3
Comments
ReferenceXu_et_al_2011
Pubmed ID21882294
Accession Number(s)nsv883278
Frequency
Sample Size6533
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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