A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv883275



Internal ID6290286
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:179201847..179265216hg19UCSC Ensembl
Outerchr5:179193598..179267783hg19UCSC Ensembl
Innerchr5:179134453..179197822hg18UCSC Ensembl
Outerchr5:179126204..179200389hg18UCSC Ensembl
Cytoband5q35.3
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
Variant TypeCNV Loss
Copy Number
Allele State
Allele Origin
Probe Count
Merged StatusS
Merged Variants
Supporting Variantsnssv1543454
SamplesMS16153
Known GenesC5orf45, LTC4S, MAML1, MGAT4B, MIR1229, SQSTM1
Method
Analysis
PlatformIllumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3
Comments
ReferenceXu_et_al_2011
Pubmed ID21882294
Accession Number(s)nsv883275
Frequency
Sample Size6533
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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