A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv8786



Internal ID15846698
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:5850007..5927191hg38UCSC Ensembl
Outerchr11:5871237..5948421hg19UCSC Ensembl
Outerchr11:5827813..5904997hg18UCSC Ensembl
Outerchr11:5827813..5904997hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg3877185
hg1977185
hg1877185
hg1777185
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv20069, nssv22081, nssv23329, nssv22332, nssv19975, nssv22848, nssv19700, nssv25056, nssv19845
SamplesNA18502, NA18980, NA18860, NA19221, NA18537, NA18853, NA19240, NA19173, NA18972
Known GenesOR52E4, OR52E8
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv8786
Frequency
Sample Size31
Observed Gain3
Observed Loss6
Observed Complex0
Frequencyn/a


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