A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv8715



Internal ID15846627
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:87109696..87268284hg38UCSC Ensembl
Outerchr10:88869453..89028041hg19UCSC Ensembl
Outerchr10:88859433..89018021hg18UCSC Ensembl
Outerchr10:88859433..89018021hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg38158589
hg19158589
hg18158589
hg17158589
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv22034, nssv20258, nssv18654, nssv22463, nssv20197, nssv19474, nssv19779, nssv21612, nssv19649, nssv17719, nssv19719, nssv21691, nssv18624, nssv17765, nssv22962, nssv22137, nssv19136, nssv17560, nssv19405, nssv19375, nssv17689, nssv19130, nssv19465, nssv17471, nssv18332, nssv24509, nssv19443, nssv19578, nssv24483, nssv21253, nssv19146, nssv19186, nssv19937, nssv18362, nssv22004, nssv21642, nssv17842
SamplesNA18502, NA11830, NA18980, NA07029, NA18504, NA12155, NA18563, NA12802, NA18860, NA18942, NA07048, NA10839, NA18975, NA19007, NA10847, NA10863, NA12872, NA18572, NA19221, NA18853, NA19132, NA18517, NA18564, NA19240, NA12740, NA19173, NA18972, NA18552
Known GenesFAM35A, NUTM2A, NUTM2A-AS1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv8715
Frequency
Sample Size31
Observed Gain4
Observed Loss27
Observed Complex0
Frequencyn/a


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