A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv8712



Internal ID15846624
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:86997784..87027284hg38UCSC Ensembl
Outerchr10:88757541..88787041hg19UCSC Ensembl
Outerchr10:88747521..88777021hg18UCSC Ensembl
Outerchr10:88747521..88777021hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg3829501
hg1929501
hg1829501
hg1729501
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv19345, nssv19156, nssv19877
SamplesNA18980, NA18563, NA18552
Known GenesAGAP11, FAM25A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv8712
Frequency
Sample Size31
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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