A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv8688



Internal ID15846600
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:73666766..73697852hg38UCSC Ensembl
Outerchr10:75426524..75457610hg19UCSC Ensembl
Outerchr10:75096530..75127616hg18UCSC Ensembl
Outerchr10:75096530..75127616hg17UCSC Ensembl
Cytoband10q22.2
Allele length
AssemblyAllele length
hg3831087
hg1931087
hg1831087
hg1731087
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv19285, nssv24353, nssv21987
SamplesNA18980, NA19221, NA19132
Known GenesAGAP5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv8688
Frequency
Sample Size31
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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