A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv8542



Internal ID15499768
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:84134385..84459995hg38UCSC Ensembl
Outerchr9:86749300..87074910hg19UCSC Ensembl
Outerchr9:85939120..86264730hg18UCSC Ensembl
Outerchr9:83978854..84304464hg17UCSC Ensembl
Cytoband9q21.32
Allele length
AssemblyAllele length
hg38325611
hg19325611
hg18325611
hg17325611
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv17995, nssv18917, nssv18495, nssv17606
SamplesNA18563, NA18537, NA19007, NA18980
Known GenesSLC28A3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv8542
Frequency
Sample Size31
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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