Variant DetailsVariant: nsv833862![](http://dgv.tcag.ca/gb2/gbrowse_img/dgv2_hg18/?name=chr19:54643858..54765745;width=800;overview=1) Internal ID | 16111045 | Landmark | | Location Information | | Cytoband | 19q13.33 | Allele length | Assembly | Allele length | hg38 | 121888 | hg19 | 121888 | hg18 | 121888 | hg17 | 121888 |
| Variant Type | CNV loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv1454804, nssv1454816, nssv1454797, nssv1454801, nssv1454799, nssv1454805, nssv1454798, nssv1454807, nssv1454815, nssv1454818, nssv1454794, nssv1454795, nssv1454808, nssv1454806, nssv1454802, nssv1454813, nssv1454803, nssv1454796, nssv1454809, nssv1454817, nssv1454814, nssv1454810, nssv1454811, nssv1454812, nssv1454800 | Samples | | Known Genes | ALDH16A1, FCGRT, FLT3LG, MIR150, NOSIP, PIH1D1, RCN3, RPL13A, RPL13AP5, RPS11, SNORD32A, SNORD33, SNORD34, SNORD35A, SNORD35B | Method | BAC aCGH | Analysis | Experimental SDs (SDautosome) were calculated for each experiment on the basis of the log2 ratios of the 24,392 reliable clones minus the clones removed because of low signal-to-noise ratio (SNR) or high SD of replicate clone measures (SDclone). Thresholds for determining CNV clones were set at a multiple of the SDautosome value. For each experiment, clones were annotated as uninformative if they were filtered via SNR or SDclone, as a CNV loss if the log2 ratio was less than the negative threshold, as unchanged if the log2 ratio was between the negative and positive thresholds, and as a CNV gain if the log2 ratio was above the positive threshold. | Platform | GPL2616 | Comments | | Reference | Wong_et_al_2007 | Pubmed ID | 17160897 | Accession Number(s) | nsv833862
| Frequency | Sample Size | 95 | Observed Gain | 0 | Observed Loss | 25 | Observed Complex | 0 | Frequency | n/a |
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