Variant DetailsVariant: nsv833331 Internal ID | 16110514 | Landmark | | Location Information | | Cytoband | 16q24.3 | Allele length | Assembly | Allele length | hg38 | 123716 | hg19 | 123716 | hg18 | 123716 | hg17 | 123716 |
| Variant Type | CNV gain+loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv1453013, nssv1453010, nssv1453028, nssv1453041, nssv1453032, nssv1453014, nssv1453034, nssv1453033, nssv1453039, nssv1453021, nssv1453007, nssv1453029, nssv1453012, nssv1453038, nssv1453023, nssv1453017, nssv1453024, nssv1453035, nssv1453008, nssv1453006, nssv1453036, nssv1453011, nssv1453025, nssv1453030, nssv1453004, nssv1453031, nssv1453009, nssv1453022, nssv1453019, nssv1453016, nssv1453027, nssv1453042, nssv1453020, nssv1453040, nssv1453005, nssv1453018, nssv1453015, nssv1453026, nssv1453037 | Samples | | Known Genes | FANCA, SPIRE2, ZNF276 | Method | BAC aCGH | Analysis | Experimental SDs (SDautosome) were calculated for each experiment on the basis of the log2 ratios of the 24,392 reliable clones minus the clones removed because of low signal-to-noise ratio (SNR) or high SD of replicate clone measures (SDclone). Thresholds for determining CNV clones were set at a multiple of the SDautosome value. For each experiment, clones were annotated as uninformative if they were filtered via SNR or SDclone, as a CNV loss if the log2 ratio was less than the negative threshold, as unchanged if the log2 ratio was between the negative and positive thresholds, and as a CNV gain if the log2 ratio was above the positive threshold. | Platform | GPL2616 | Comments | | Reference | Wong_et_al_2007 | Pubmed ID | 17160897 | Accession Number(s) | nsv833331
| Frequency | Sample Size | 95 | Observed Gain | 38 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
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