Variant DetailsVariant: nsv833123![](http://dgv.tcag.ca/gb2/gbrowse_img/dgv2_hg18/?name=chr16:2551249..2754990;width=800;overview=1) Internal ID | 16110306 | Landmark | | Location Information | | Cytoband | 16p13.3 | Allele length | Assembly | Allele length | hg38 | 203742 | hg19 | 203742 | hg18 | 203742 | hg17 | 203742 |
| Variant Type | CNV gain+loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv1452222, nssv1452224, nssv1452233, nssv1452221, nssv1452236, nssv1452223, nssv1452239, nssv1452220, nssv1452228, nssv1452240, nssv1452230, nssv1452234, nssv1452229, nssv1452238, nssv1452237, nssv1452242, nssv1452226, nssv1452241, nssv1452235, nssv1452231, nssv1452225, nssv1452227, nssv1452232 | Samples | | Known Genes | ERVK13-1, FLJ42627, KCTD5, LOC652276, PDPK1, PRSS27, SRRM2, SRRM2-AS1 | Method | BAC aCGH | Analysis | Experimental SDs (SDautosome) were calculated for each experiment on the basis of the log2 ratios of the 24,392 reliable clones minus the clones removed because of low signal-to-noise ratio (SNR) or high SD of replicate clone measures (SDclone). Thresholds for determining CNV clones were set at a multiple of the SDautosome value. For each experiment, clones were annotated as uninformative if they were filtered via SNR or SDclone, as a CNV loss if the log2 ratio was less than the negative threshold, as unchanged if the log2 ratio was between the negative and positive thresholds, and as a CNV gain if the log2 ratio was above the positive threshold. | Platform | GPL2616 | Comments | | Reference | Wong_et_al_2007 | Pubmed ID | 17160897 | Accession Number(s) | nsv833123
| Frequency | Sample Size | 95 | Observed Gain | 1 | Observed Loss | 22 | Observed Complex | 0 | Frequency | n/a |
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