Variant DetailsVariant: nsv832949 Internal ID | 16110132 | Landmark | | Location Information | | Cytoband | 15q13.2 | Allele length | Assembly | Allele length | hg38 | 138309 | hg19 | 138309 | hg18 | 138309 | hg17 | 138309 |
| Variant Type | CNV gain | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv1451768, nssv1451733, nssv1451766, nssv1451746, nssv1451731, nssv1451747, nssv1451772, nssv1451750, nssv1451756, nssv1451722, nssv1451767, nssv1451760, nssv1451741, nssv1451732, nssv1451771, nssv1451758, nssv1451745, nssv1451765, nssv1451751, nssv1451754, nssv1451721, nssv1451727, nssv1451743, nssv1451769, nssv1451762, nssv1451753, nssv1451737, nssv1451770, nssv1451739, nssv1451734, nssv1451720, nssv1451764, nssv1451736, nssv1451742, nssv1451729, nssv1451740, nssv1451763, nssv1451774, nssv1451725, nssv1451738, nssv1451730, nssv1451759, nssv1451744, nssv1451752, nssv1451755, nssv1451735, nssv1451749, nssv1451757, nssv1451728, nssv1451726, nssv1451773, nssv1451748, nssv1451775, nssv1451761, nssv1451723, nssv1451724 | Samples | | Known Genes | ARHGAP11B, LOC100288637 | Method | BAC aCGH | Analysis | Experimental SDs (SDautosome) were calculated for each experiment on the basis of the log2 ratios of the 24,392 reliable clones minus the clones removed because of low signal-to-noise ratio (SNR) or high SD of replicate clone measures (SDclone). Thresholds for determining CNV clones were set at a multiple of the SDautosome value. For each experiment, clones were annotated as uninformative if they were filtered via SNR or SDclone, as a CNV loss if the log2 ratio was less than the negative threshold, as unchanged if the log2 ratio was between the negative and positive thresholds, and as a CNV gain if the log2 ratio was above the positive threshold. | Platform | GPL2616 | Comments | | Reference | Wong_et_al_2007 | Pubmed ID | 17160897 | Accession Number(s) | nsv832949
| Frequency | Sample Size | 95 | Observed Gain | 56 | Observed Loss | 0 | Observed Complex | 0 | Frequency | n/a |
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