| Internal ID | 16110065 |
| Landmark | |
| Location Information | |
| Cytoband | 14q32.32 |
| Allele length | | Assembly | Allele length | | hg38 | 172236 | | hg19 | 172236 | | hg18 | 172236 | | hg17 | 172236 |
|
| Variant Type | CNV loss |
| Copy Number | |
| Allele State | |
| Allele Origin | |
| Probe Count | |
| Validation Flag | |
| Merged Status | M |
| Merged Variants | |
| Supporting Variants | nssv1451166, nssv1451164, nssv1451165 |
| Samples | |
| Known Genes | CDC42BPB, EXOC3L4, TNFAIP2 |
| Method | BAC aCGH |
| Analysis | Experimental SDs (SDautosome) were calculated for each experiment on the basis of the log2 ratios of the 24,392 reliable clones minus the clones removed because of low signal-to-noise ratio (SNR) or high SD of replicate clone measures (SDclone). Thresholds for determining CNV clones were set at a multiple of the SDautosome value. For each experiment, clones were annotated as uninformative if they were filtered via SNR or SDclone, as a CNV loss if the log2 ratio was less than the negative threshold, as unchanged if the log2 ratio was between the negative and positive thresholds, and as a CNV gain if the log2 ratio was above the positive threshold. |
| Platform | GPL2616 |
| Comments | |
| Reference | Wong_et_al_2007 |
| Pubmed ID | 17160897 |
| Accession Number(s) | nsv832882
|
| Frequency | | Sample Size | 95 | | Observed Gain | 0 | | Observed Loss | 3 | | Observed Complex | 0 | | Frequency | n/a |
|
