Variant DetailsVariant: nsv832853Internal ID | 16110036 | Landmark | | Location Information | | Cytoband | 14q32.11 | Allele length | Assembly | Allele length | hg38 | 171391 | hg19 | 171391 | hg18 | 171391 | hg17 | 171391 |
| Variant Type | CNV gain | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv1451101, nssv1451099, nssv1451109, nssv1451122, nssv1451121, nssv1451113, nssv1451104, nssv1451108, nssv1451103, nssv1451115, nssv1451112, nssv1451098, nssv1451102, nssv1451118, nssv1451107, nssv1451116, nssv1451119, nssv1451120, nssv1451123, nssv1451114, nssv1451110, nssv1451105, nssv1451100, nssv1451111 | Samples | | Known Genes | EFCAB11, TDP1 | Method | BAC aCGH | Analysis | Experimental SDs (SDautosome) were calculated for each experiment on the basis of the log2 ratios of the 24,392 reliable clones minus the clones removed because of low signal-to-noise ratio (SNR) or high SD of replicate clone measures (SDclone). Thresholds for determining CNV clones were set at a multiple of the SDautosome value. For each experiment, clones were annotated as uninformative if they were filtered via SNR or SDclone, as a CNV loss if the log2 ratio was less than the negative threshold, as unchanged if the log2 ratio was between the negative and positive thresholds, and as a CNV gain if the log2 ratio was above the positive threshold. | Platform | GPL2616 | Comments | | Reference | Wong_et_al_2007 | Pubmed ID | 17160897 | Accession Number(s) | nsv832853
| Frequency | Sample Size | 95 | Observed Gain | 24 | Observed Loss | 0 | Observed Complex | 0 | Frequency | n/a |
|
|