Variant DetailsVariant: nsv831965![](http://dgv.tcag.ca/gb2/gbrowse_img/dgv2_hg18/?name=chr10:102666471..102832543;width=800;overview=1) Internal ID | 16109148 | Landmark | | Location Information | | Cytoband | 10q24.31 | Allele length | Assembly | Allele length | hg38 | 166073 | hg19 | 166073 | hg18 | 166073 | hg17 | 166073 |
| Variant Type | CNV loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv1448709, nssv1448705, nssv1448703, nssv1448708, nssv1448710, nssv1448704, nssv1448707 | Samples | | Known Genes | C10orf2, FAM178A, KAZALD1, LZTS2, MIR608, MRPL43, PDZD7, SEMA4G, SFXN3 | Method | BAC aCGH | Analysis | Experimental SDs (SDautosome) were calculated for each experiment on the basis of the log2 ratios of the 24,392 reliable clones minus the clones removed because of low signal-to-noise ratio (SNR) or high SD of replicate clone measures (SDclone). Thresholds for determining CNV clones were set at a multiple of the SDautosome value. For each experiment, clones were annotated as uninformative if they were filtered via SNR or SDclone, as a CNV loss if the log2 ratio was less than the negative threshold, as unchanged if the log2 ratio was between the negative and positive thresholds, and as a CNV gain if the log2 ratio was above the positive threshold. | Platform | GPL2616 | Comments | | Reference | Wong_et_al_2007 | Pubmed ID | 17160897 | Accession Number(s) | nsv831965
| Frequency | Sample Size | 95 | Observed Gain | 0 | Observed Loss | 7 | Observed Complex | 0 | Frequency | n/a |
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