A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820309



Internal ID15238274
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:86095450..86096489hg38UCSC Ensembl
Innerchr4:87016603..87017642hg19UCSC Ensembl
Innerchr4:87235627..87236666hg18UCSC Ensembl
Cytoband4q21.3
Allele length
AssemblyAllele length
hg381040
hg191040
hg181040
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419158
SamplesAK1
Known GenesMAPK10
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820309
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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