A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820238



Internal ID15238203
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:65624239..65624886hg38UCSC Ensembl
Innerchr15:65916577..65917224hg19UCSC Ensembl
Innerchr15:63703630..63704277hg18UCSC Ensembl
Cytoband15q22.31
Allele length
AssemblyAllele length
hg38648
hg19648
hg18648
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419039
SamplesAK1
Known GenesSLC24A1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820238
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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