A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820209



Internal ID15584910
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:44679204..44691780hg38UCSC Ensembl
Innerchr7:44718803..44731379hg19UCSC Ensembl
Innerchr7:44685328..44697904hg18UCSC Ensembl
Cytoband7p13
Allele length
AssemblyAllele length
hg3812577
hg1912577
hg1812577
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418632
SamplesAK1
Known GenesOGDH
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820209
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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